RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 046230
(489 letters)
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase
{Escherichia coli [TaxId: 562]}
Length = 401
Score = 251 bits (642), Expect = 1e-79
Identities = 110/402 (27%), Positives = 191/402 (47%), Gaps = 32/402 (7%)
Query: 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESL 128
R I+SA A V + + +N + NYLG A + +
Sbjct: 29 RIITSAQQADITVADG---------------SHVINFCANNYLGLA-NHPDLIAAAKAGM 72
Query: 129 KKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLI 188
+ S R GT H ELE+ +A F+G AI++ + N + L+ I
Sbjct: 73 DSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAI 132
Query: 189 ISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG 248
ISD+LNH SI++G R A + +N LE L+E + +++ +G
Sbjct: 133 ISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAR-------EAGARHVLIATDG 185
Query: 249 IYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGT 308
++SM+G + + + KY A + +D++H++G VG+ GRG E +V VDI+ GT
Sbjct: 186 VFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVM-GRVDIITGT 244
Query: 309 FTKSFGSC-GGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRG 367
K+ G GGY A KE++++L+ +L++ S++P I ++++ G
Sbjct: 245 LGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV------EAG 298
Query: 368 AQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVT 427
++ R+ N+ FR ++ GF L D ++P+ML + F+RE ++ + V
Sbjct: 299 SELRDRLWANARQFREQMSAAGFT-LAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTG 357
Query: 428 VAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGI 469
+P P AR R +SA+HT E + +A+E +R+G +G+
Sbjct: 358 FFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGV 399
>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase
(8-amino-7-oxonanoate synthase, AONS) {Escherichia coli
[TaxId: 562]}
Length = 383
Score = 219 bits (559), Expect = 1e-67
Identities = 98/396 (24%), Positives = 182/396 (45%), Gaps = 35/396 (8%)
Query: 69 RPISSAPDAWFDVVERFSNDSNKTLKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESL 128
P++ W +R + LN S +YLG + +
Sbjct: 23 YPVAQGAGRWLVADDR----------------QYLNFSSNDYLGLS-HHPQIIRAWQQGA 65
Query: 129 KKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLI 188
+++ + S G +VH LEE +A ++G A++F G+ N A++ +M K I
Sbjct: 66 EQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRI 125
Query: 189 ISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEG 248
+D L+H S++ A S + +R F HN +HL +L + MV+ EG
Sbjct: 126 AADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLA----------SPCPGQQMVVTEG 175
Query: 249 IYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGT 308
++SM+G+ EI + +++ ++ +D+AH G +G+ GRG C L +V + + G
Sbjct: 176 VFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFG- 234
Query: 309 FTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGA 368
K FG G + S + YL +Y+TS+ P A+ + +++ VI S G
Sbjct: 235 --KGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIR----SDEGD 288
Query: 369 QKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTV 428
+ ++ FR+ +Q + F L D+ S + P+++ + ++ + + +Q V +
Sbjct: 289 ARREKLAALITRFRAGVQDLPFT-LADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAI 347
Query: 429 AFPATPLLLARARICISASHTKEDLIKALEVISRVG 464
P P AR R+ ++A+H +D+ + LEV+ G
Sbjct: 348 RPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG 383
>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter
capsulatus [TaxId: 1061]}
Length = 396
Score = 188 bits (477), Expect = 2e-55
Identities = 100/390 (25%), Positives = 166/390 (42%), Gaps = 21/390 (5%)
Query: 79 FDVVERFSNDSNKT--LKRTNKVNRCLNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTC 136
F +ER K + +YLG + E+L+ +
Sbjct: 22 FIDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMG-QHPVVLAAMHEALEAVGAGSG 80
Query: 137 SSRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRK--GSLIISDSLN 194
+R GT H LE +A K AA+VF Y N A L L G +I SDSLN
Sbjct: 81 GTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLN 140
Query: 195 HNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254
H S++ G + + R+F+HN +HL E P ++ E +YSM+G
Sbjct: 141 HASMIEGIKRNAGPKRIFRHNDVAHLRE---------LIAADDPAAPKLIAFESVYSMDG 191
Query: 255 ELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG 314
+ EI I +++ A Y+DE H++G G G GV E + +DI GT K++G
Sbjct: 192 DFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMH-RIDIFNGTLAKAYG 250
Query: 315 SCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARI 374
GGYIA S ++ ++ P +++TS+ P A ++I + +G
Sbjct: 251 VFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKL----RDAQ 306
Query: 375 RENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQ-NVAVVTVAFPAT 433
+ ++ + L+ +G ++ D+ S ++P+++ +P A S L V V + FP
Sbjct: 307 QMHAKVLKMRLKALGMPII-DHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTV 365
Query: 434 PLLLARARICISASHTKEDLIKALEVISRV 463
P R R S H + + + + +
Sbjct: 366 PRGTERLRFTPSPVHDLKQIDGLVHAMDLL 395
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Thermotoga maritima [TaxId: 2336]}
Length = 343
Score = 101 bits (252), Expect = 2e-24
Identities = 49/320 (15%), Positives = 104/320 (32%), Gaps = 19/320 (5%)
Query: 148 HNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGA 207
NELE A GK AA+ G + N + ++G +I ++ +H +
Sbjct: 36 INELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVL 95
Query: 208 TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPE-IIAIC 266
+ + + + +PR + ++ +E ++ G E I IC
Sbjct: 96 SGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEIC 155
Query: 267 KKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKEL 326
K + + + E +M G + G ++
Sbjct: 156 TIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDF 215
Query: 327 IQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQ 386
I+ + + A I A+ ++ +L EN+ F +L+
Sbjct: 216 IERARKARKMLGGGMRQAGVLAAAGIIALTKMV---------DRLKEDHENARFLALKLK 266
Query: 387 KMGFEVLGDNDSPVMPIMLYNPAKIPA--FSRECLRQNVAVVTVAFPATPLLLARARICI 444
++G+ V ++ M I+ + K+ A F V V+ R+
Sbjct: 267 EIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAVSDT-------EIRLVT 319
Query: 445 SASHTKEDLIKALEVISRVG 464
++ D+ +AL + ++
Sbjct: 320 HKDVSRNDIEEALNIFEKLF 339
>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS)
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 364
Score = 99.9 bits (247), Expect = 1e-23
Identities = 50/355 (14%), Positives = 121/355 (34%), Gaps = 20/355 (5%)
Query: 120 CTPRVIESLKKY------SPSTCSSRVD-GGTLMVHNELEECVARFVGKPAAIVFGMGYV 172
T ++L ++ + R+D T +H+ + + +F+G A V
Sbjct: 14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGARE 73
Query: 173 TNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQ 232
A++ L +K + ++ D H S A +G I + E A+
Sbjct: 74 AKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITP-ENFAQTI 132
Query: 233 PRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVC 292
T + + ++ ++ G L +I +C +Y + ++ A++IG + + + +
Sbjct: 133 EETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIG 192
Query: 293 ELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQII 352
D + G + + G + +E + + + +
Sbjct: 193 A-------DFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGA 245
Query: 353 SAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIP 412
+ I ++ ++ E + F +E++K+G + LGDN +M ++ +
Sbjct: 246 TIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNH-DLMFFHAEVLY 304
Query: 413 AFSRECLRQNVAVVTVAFPA----TPLLLARARICISASHTKEDLIKALEVISRV 463
S++ + L R + + E++ L +
Sbjct: 305 EISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEI 359
>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain
{Lactobacillus sp., strain 30a [TaxId: 1591]}
Length = 462
Score = 93.5 bits (231), Expect = 3e-21
Identities = 52/367 (14%), Positives = 102/367 (27%), Gaps = 38/367 (10%)
Query: 131 YSPSTCSSRVDGGTLMVHN----ELEECVARFVGKPAAIVF-GMGYVTNSAILPVLMRKG 185
+ C++ V G L++H E+ AR G N+ + L+ G
Sbjct: 47 FRADLCNADVALGDLLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNG 106
Query: 186 SLIISDSLNHNSIVNGARGSGATIRVFQHN------------TPSHLEEVLREQIAEGQP 233
L++ D NH S+ N A V+ E+ +RE A+ P
Sbjct: 107 DLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDP 166
Query: 234 RTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAV------GKT 287
+ + + V + + +G + E++ YI D A +
Sbjct: 167 ERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSS 226
Query: 288 GRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISP-- 345
+ +L D + + ++ S I I+ C + S +
Sbjct: 227 PLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFM 286
Query: 346 --PAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEVLGDNDSPVMP 402
+ +A+ V G + + + R +L K
Sbjct: 287 STSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGK 346
Query: 403 IMLYNPAKIPAFSRECLRQNVAVVTVAFPA----------TPLLLARARICISASHTKED 452
+ A + + R A+ +L I ++
Sbjct: 347 KWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDF 406
Query: 453 LIKALEV 459
+ A V
Sbjct: 407 GVPATIV 413
>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas
putida [TaxId: 303]}
Length = 345
Score = 90.7 bits (223), Expect = 1e-20
Identities = 45/366 (12%), Positives = 93/366 (25%), Gaps = 33/366 (9%)
Query: 103 LNLGSYNYLGFAASDEYCTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKP 162
L S N G +P V ++L K+S GT + +++ +
Sbjct: 5 LGFSSDNIAG-------ASPEVAQALVKHSSGQAGPY---GTDELTAQVKRKFCEIFERD 54
Query: 163 AAIVF-GMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSH-- 219
+ G N+ L + I +H + +
Sbjct: 55 VEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAA 114
Query: 220 ---LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLD 276
+ + + + + L + I +CK +++D
Sbjct: 115 KLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMD 174
Query: 277 EAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPA 336
+ A+ G E+ + G + + + L + Y
Sbjct: 175 GSRFANALVSLGCSPAEM-TWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKR 233
Query: 337 HLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDN 396
+ +S + QI + + L + G EVLG
Sbjct: 234 AGHLSSKMRFLSAQIDAYLTDDLWLR------NARKANAAAQRLAQGLEGLGGVEVLGGT 287
Query: 397 DSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKA 456
++ ++ L + A L+ R S + T ED+
Sbjct: 288 EANILFCRLDS-----AMIDALLKAGFGF-----YHDRWGPNVVRFVTSFATTAEDVDHL 337
Query: 457 LEVISR 462
L +
Sbjct: 338 LNQVRL 343
>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase)
{Escherichia coli [TaxId: 562]}
Length = 467
Score = 83.8 bits (206), Expect = 6e-18
Identities = 45/415 (10%), Positives = 95/415 (22%), Gaps = 53/415 (12%)
Query: 101 RCLNLGSYNYLGFAASDEY-----CTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECV 155
+ N + D + + + + G+ L E V
Sbjct: 25 EAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAFSGSRSY-YALAESV 83
Query: 156 ARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNG---------ARGSG 206
G I G +PVL++K + + ++ +G
Sbjct: 84 KNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQING 143
Query: 207 ATIR------VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFP 260
T+R F + + E P ++ + G
Sbjct: 144 CTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL 203
Query: 261 E----IIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADV--------DIMMGT 308
+ +I KKY + +D A + E + + D++ +
Sbjct: 204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMS 263
Query: 309 FTKSFGSCGGY-IAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRG 367
K G + + + C P A++ +
Sbjct: 264 AKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN 323
Query: 368 AQKLARIRENSNFFRSELQKM--------GFEVLGDNDSPVMPIMLYNPAKIPAFSRECL 419
LA + L+++ G D + I
Sbjct: 324 LDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYK 383
Query: 420 RQNVAVVTVAFPATPLLLARA----------RICISA-SHTKEDLIKALEVISRV 463
+ V + R+ I ++T+ + +E V
Sbjct: 384 VAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHV 438
>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola
[TaxId: 549]}
Length = 456
Score = 73.7 bits (180), Expect = 1e-14
Identities = 28/279 (10%), Positives = 77/279 (27%), Gaps = 33/279 (11%)
Query: 149 NELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGAT 208
LE+ V G + G + + + ++ G + + + + +
Sbjct: 78 YHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATF 137
Query: 209 IRVF--------------QHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEG 254
+ + + L +++E+ AE + V V
Sbjct: 138 VDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYIC-----LAVTVNLAGGQPV 192
Query: 255 ELCKFPEIIAICKKYKAYIYLDEAHSIGAV--------GKTGRGVCELLEVDTADVDIMM 306
+ + + Y I+ D + G + +++ + D
Sbjct: 193 SMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCT 252
Query: 307 GTFTKSFGSCGGYIA--GSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGS 364
+ K G +E+ K + S A + A+ + L E
Sbjct: 253 MSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDME-AMAIGLRE--- 308
Query: 365 SRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPI 403
+ + + + + +L++ G ++ + +
Sbjct: 309 AMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFL 347
>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS)
{Methanococcus maripaludis [TaxId: 39152]}
Length = 434
Score = 71.5 bits (174), Expect = 6e-14
Identities = 40/342 (11%), Positives = 99/342 (28%), Gaps = 34/342 (9%)
Query: 142 GGTLMVH--NELEECVARFVGKPAA--IVFGMGYVTNSAILPVL--MRKGSLIISDSLNH 195
G ++M N++ E + +G ++ S L +++I +H
Sbjct: 107 GASIMYALTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASH 166
Query: 196 NSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE 255
S + G +R+ + V E I + + V+ +
Sbjct: 167 KSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRN 226
Query: 256 LCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGS 315
EI IC+ Y ++ A++I + VD ++ + K+ +
Sbjct: 227 SDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKK----AFKYRVDAVVSSSDKNLLT 282
Query: 316 CGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIR 375
G +++K ++ S +P + +G + +
Sbjct: 283 PIGGGLVYSTDAEFIKEISLSYPGRASATPV---VNTLVSLLSMGSKNYLELVK---NQK 336
Query: 376 ENSNFFRSELQKM----GFEVLGDNDSPVMPIML-YNPAKIPAFSRECLRQNVAVVT--- 427
+ L + G + L I + +P +I A +
Sbjct: 337 NSKKLLDELLNDLSKKTGGKFLDVESPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTD 396
Query: 428 ------VAFPATPLLLARARICISASHTKEDLIKALEVISRV 463
+ + + + ED++ ++ + ++
Sbjct: 397 HFGNCYLGTYTHDYI----VMNAAIGVRTEDIVNSVSKLEKI 434
>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Leishmania major [TaxId: 5664]}
Length = 340
Score = 66.5 bits (160), Expect = 2e-12
Identities = 43/354 (12%), Positives = 99/354 (27%), Gaps = 23/354 (6%)
Query: 115 ASDEY--CTPRVIESLKKYSPSTCSSRVDGGTLMVHNELEECVARFVGKPAAIVF--GMG 170
+D P++++ + + + + + G + + + +P A V G
Sbjct: 5 VNDYSVGMHPKILDLMARDNMTQHAGY---GQDSHCAKAARLIGELLERPDADVHFISGG 61
Query: 171 YVTNSAILPVLMRKGSLIISDSLNHNSI-VNGARGSGATIRVFQHNTPSHLEEVLREQIA 229
TN + +R +I+ L H S GA + V L E
Sbjct: 62 TQTNLIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESAL 121
Query: 230 EGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGR 289
H K++ I + E I+ K + + + +
Sbjct: 122 HENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPV 181
Query: 290 GVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAE 349
L ++ +G I + L ++ +
Sbjct: 182 NDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGI 241
Query: 350 QIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA 409
Q +K L + A + + ++ L+ G + + S +
Sbjct: 242 QFEVLMKDNLFF-------ELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFP------ 288
Query: 410 KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463
+ L + + R+C S + +++ + +EV+ R+
Sbjct: 289 ILENTMIAELNNDFDMY--TVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKRL 340
>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia
coli [TaxId: 562]}
Length = 416
Score = 61.2 bits (148), Expect = 9e-11
Identities = 51/304 (16%), Positives = 106/304 (34%), Gaps = 23/304 (7%)
Query: 115 ASDEYCTPRVIESL-----KKYSPSTCSSRVDGGTLMVHNELEECVAR----FVGKPAAI 165
AS+ Y +PRV+++ KY+ R GG V + + R F A +
Sbjct: 33 ASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANV 92
Query: 166 VFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT-PSHLEEVL 224
G N A+ L+ G ++ +L H + + +++ +
Sbjct: 93 QPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHI 152
Query: 225 REQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAV 284
E Q + H+ ++ G +S + + ++ I AY+++D AH G V
Sbjct: 153 DYADLEKQAKEHK-----PKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLV 207
Query: 285 GKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSIS 344
+ ++ T K+ G + +K + L + ++
Sbjct: 208 ------AAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQG 261
Query: 345 PPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFE-VLGDNDSPVMPI 403
P +I+ V L E ++ +N+ + G++ V G D+ + +
Sbjct: 262 GPLM-HVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLV 320
Query: 404 MLYN 407
L +
Sbjct: 321 DLVD 324
>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 445
Score = 57.3 bits (137), Expect = 2e-09
Identities = 55/420 (13%), Positives = 115/420 (27%), Gaps = 71/420 (16%)
Query: 99 VNRCLNLGSYNYLGFAASDEYCTPRVIESL---------------KKYSPSTCSSRVDGG 143
++ + S N+LG E RV +L S +
Sbjct: 33 LHELAVMDSNNFLGNCGVGER-EGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL 91
Query: 144 TLMVHNELEECVARFVGKPA-AIVFGMGYVTNSAILPVLM------RKGSLIISDSLNHN 196
+ N L V + G + A F + T ++ + K II ++
Sbjct: 92 LNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQK 151
Query: 197 SIVNGARGSGATIR----VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSM 252
S +G V + + + + +I + P + +
Sbjct: 152 SCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKI-----QELGPEHILCLHSTTACFA 206
Query: 253 EGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKS 312
+ E+ IC Y ++ A+ + + +D + + K+
Sbjct: 207 PRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA---RVGRIDAFVQSLDKN 263
Query: 313 FGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLA 372
F G + +++ + S SP + + L G S + L
Sbjct: 264 FMVPVGGAIIAGFNEPFIQDISKMYPGRASASP------SLDVLITLLSLGCSGYRKLLK 317
Query: 373 RIRENSNFFRSELQKM----GFEVLGDNDSPVMPIM-LYNPAKIPAFSRECL-------- 419
+E + ++L+K+ +L +P+ M L + L
Sbjct: 318 ERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQ 377
Query: 420 ------------RQNVAVVTVAFPATPLLLARARICISAS--HTKED---LIKALEVISR 462
+ F + A + +A+ +D IK L+
Sbjct: 378 VSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLN 437
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase)
{Proteus vulgaris [TaxId: 585]}
Length = 465
Score = 56.1 bits (134), Expect = 4e-09
Identities = 32/361 (8%), Positives = 80/361 (22%), Gaps = 48/361 (13%)
Query: 149 NELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNH-------NSIVNG 201
+L++ I G + + PVL++ ++
Sbjct: 78 YDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAH 137
Query: 202 ARGSGATIR------VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGE 255
+G F T + + + H + ++ + G
Sbjct: 138 VELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGG 197
Query: 256 LCKFPE----IIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMG---- 307
+ I K++ ++ +D A + +V M
Sbjct: 198 QPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD 257
Query: 308 --TFTKSFGSCG---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGED 362
T + G +A + + ++
Sbjct: 258 ALTMSAKKDPLLNIGGLVAIRDNEEIFTL--ARQRCVPMEGFVTYGGLAGRDMAAMVQGL 315
Query: 363 GSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA-KIPAFSREC--- 418
+ L + L++ G + + + +IP
Sbjct: 316 EEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAV 375
Query: 419 -----LRQNVAVVTVAFPATPLLLAR----------ARICISA-SHTKEDLIKALEVISR 462
L V V + A R+ I+ +T + + + +
Sbjct: 376 INALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIG 435
Query: 463 V 463
+
Sbjct: 436 L 436
>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 405
Score = 55.8 bits (134), Expect = 5e-09
Identities = 58/324 (17%), Positives = 105/324 (32%), Gaps = 25/324 (7%)
Query: 109 NYLGFAASDEYCTPRVIESL-----KKYSPSTCSSRVDGGTLMVHNELEECVAR----FV 159
+ AS+ + + V+E+ KY+ R GG V E R F
Sbjct: 24 AKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFG 83
Query: 160 GKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSH 219
+ A + G N A+ ++ G ++ +L+H + + +
Sbjct: 84 AEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGV 143
Query: 220 LEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAH 279
E + + + K++V Y + KF EI + AY+ +D AH
Sbjct: 144 DPETHVIDYDDVREKARLHRPKLIVAAASAYPRIIDFAKFREI---ADEVGAYLMVDMAH 200
Query: 280 SIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC-GGYIAGSKELIQYLKYTCPAHL 338
G V L + T K+ GG I ++ + + +
Sbjct: 201 IAGLV------AAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQEQFAKQIDKAIFPGI 254
Query: 339 YATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFE-VLGDND 397
+ I+A V GE R+ +N+ S LQ GF V G D
Sbjct: 255 QGGPLMHV-----IAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTD 309
Query: 398 SPVMPIMLYNPAKIPAFSRECLRQ 421
+ ++ + L + + L +
Sbjct: 310 NHLLLVDLRPQQLTGKTAEKVLDE 333
>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli
[TaxId: 562]}
Length = 391
Score = 49.9 bits (118), Expect = 4e-07
Identities = 58/391 (14%), Positives = 130/391 (33%), Gaps = 57/391 (14%)
Query: 110 YLGFAASDEYCTPRVIESLKKY-----SPSTCSSRVDGGTLMVHNELEEC---VARFVG- 160
YL ++A+ PRV E + ++ + +SR ++ +A VG
Sbjct: 5 YLDYSAT-TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGA 63
Query: 161 KPAAIVFGMGYVTNSAILPVLM-------RKGSLIISDSLNHNSIVNGAR---GSGATIR 210
P IVF G + + +KG II+ H ++++ R G +
Sbjct: 64 DPREIVFTSG--ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVT 121
Query: 211 VFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYK 270
++ L+E A + T I+V + + + G + I +C+
Sbjct: 122 YLAPQRNGIID--LKELEAAMRDDT------ILVSIMHVNNEIGVVQDIAAIGEMCRARG 173
Query: 271 AYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIAGSKELIQY 329
++D S+G +++ VD+M + K +G G G + ++
Sbjct: 174 IIYHVDATQSVG---------KLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVR 224
Query: 330 LKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQK-M 388
++ + + A ++ R+R N + ++
Sbjct: 225 IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIE 284
Query: 389 GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLAR--------- 439
+ GD + I+ + + S +++AV + + + L
Sbjct: 285 EVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLN 344
Query: 440 -------ARICISASHTKEDLIKALEVISRV 463
R + T+E++ +E++ +
Sbjct: 345 DELAHSSIRFSLGRFTTEEEIDYTIELVRKS 375
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium
lapideum [TaxId: 32060]}
Length = 388
Score = 47.9 bits (113), Expect = 2e-06
Identities = 55/374 (14%), Positives = 109/374 (29%), Gaps = 46/374 (12%)
Query: 111 LGFAASDEYCTPRVIESLKK--------YSPSTCSSRVDGGTLMVHNELEECVARFVGKP 162
D ++E+ K Y P+ G + + + + R G
Sbjct: 35 FSAGEPDFNTPKHIVEAAKAALEQGKTRYGPA-------AGEPRLREAIAQKLQRDNGLC 87
Query: 163 AA---IVFGMGYV-TNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPS 218
I+ G + ++ ++ G +I + S + + T V T
Sbjct: 88 YGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTP-VILPTTVE 146
Query: 219 HLEEVLREQIAEGQPRTHRPWKKIMVIV--EGIYSMEGELCKFPEIIAICKKYKAYIYLD 276
+V EQI + P K++V M + I + + ++ D
Sbjct: 147 TQFKVSPEQIRQ----AITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSD 202
Query: 277 EAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKELIQYLKYT 333
E + + + ++ F K++ G G++AG L++
Sbjct: 203 EIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKI 262
Query: 334 CPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKM-GFEV 392
E+ + LA E + L M G E
Sbjct: 263 QGHSTSNVCTFAQYGAIAAY-------ENSQDCVQEMLAAFAERRRYMLDALNAMPGLEC 315
Query: 393 LGDNDSP-VMPIMLYNPAKIPAFSRECLRQ-NVAVVT-VAFPATPLLLARARICISASHT 449
+ + + P + F E L Q VA V AF A + R+ +
Sbjct: 316 PKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCI----RLSYATD-- 369
Query: 450 KEDLIKALEVISRV 463
+ + + +E + +
Sbjct: 370 LDTIKRGMERLEKF 383
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus
thermophilus [TaxId: 274]}
Length = 382
Score = 46.7 bits (110), Expect = 3e-06
Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 19/212 (8%)
Query: 257 CKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC 316
+ + ++ Y+ DE + + + + + K+F
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVA----PEHTLTVNGAAKAFAMT 239
Query: 317 G---GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLAR 373
G GY G KE+I+ + + ++ SP Q + + E +
Sbjct: 240 GWRIGYACGPKEVIKAMA----SVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 374 IRENSNFFRSELQKMGFEVLGDNDSP-VMPIMLYNPAKIPAFSRECLRQNVAVVT-VAFP 431
R + L +G + + + + V+ + L VAVV F
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA 355
Query: 432 ATPLLLARARICISASHTKEDLIKALEVISRV 463
A + R+ + S +E+L KALE +RV
Sbjct: 356 AFGHV----RLSYATS--EENLRKALERFARV 381
>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum)
[TaxId: 4682]}
Length = 425
Score = 41.2 bits (96), Expect = 2e-04
Identities = 20/190 (10%), Positives = 54/190 (28%), Gaps = 28/190 (14%)
Query: 297 VDTADVDIMMGTFTKSFGSCG---GYIAGSKELI--QYLKYTCPAHLYATSISPPAAEQI 351
AD DI++ T +K G G G+ E + L Y + + ++
Sbjct: 237 KYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKV 296
Query: 352 ISAIKVILGE---DGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSP--------- 399
+ + ++ ++RE + L + +
Sbjct: 297 LKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRM 356
Query: 400 ----VMPIMLYNPAKIPAFSRECLRQ-NVAVVT-VAFPATPLLLARARICISASHTKEDL 453
+ + + + + V F A+ + R+ + + ++D
Sbjct: 357 RPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYV---RLSLIKT--QDDF 411
Query: 454 IKALEVISRV 463
+ + + +
Sbjct: 412 DQLMYYLKDM 421
>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 476
Score = 39.4 bits (91), Expect = 7e-04
Identities = 41/331 (12%), Positives = 87/331 (26%), Gaps = 36/331 (10%)
Query: 155 VARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQH 214
AR G +T A+L L+ + H+S+ G ++
Sbjct: 158 AARTKVVRRLQAASPG-LTQGAVLEKLV-----AYASDQAHSSVERAGLIGGVKLKAIPS 211
Query: 215 NTPSHLE-EVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIAICKKYKAYI 273
+ + L+E + + P V+ + E+ IC + ++
Sbjct: 212 DGKFAMRASALQEALERDKAAGLIP---FFVVATLGTTSCCSFDNLLEVGPICHEEDIWL 268
Query: 274 YLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYT 333
++D A G+ L V+ D K A + L
Sbjct: 269 HVD-AAYAGSAFICPEFRHLLNGVE--FADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGA 325
Query: 334 CPAHLYATSISPPAAEQIIS---------------AIKVILGEDGSSRGAQKLARIRENS 378
S + I + + G + + + S
Sbjct: 326 FKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLS 385
Query: 379 NFFRSELQKM-GFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLL 437
+ F + + + FEV + + ++ + + L + + L
Sbjct: 386 HEFEAFVLQDPRFEVCAE---VTLGLVCFRLKGSDGLNEA-LLERINSARKIHLVPCRLR 441
Query: 438 ARA--RICISASHT-KEDLIKALEVISRVGD 465
+ R I + + A E I +
Sbjct: 442 GQFVLRFAICSRKVESGHVRLAWEHIRGLAA 472
>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase
{Escherichia coli [TaxId: 562]}
Length = 405
Score = 38.4 bits (88), Expect = 0.002
Identities = 65/411 (15%), Positives = 142/411 (34%), Gaps = 62/411 (15%)
Query: 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKY---SPSTCSSRVDGGTLMVHNELEEC-- 154
+R +N YL AAS +VI++ ++ + + + ++E
Sbjct: 15 SREVNGLPLAYLDSAAS-AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRK 73
Query: 155 -VARFVGKPAAIVFGMGYVTNSAI-------LPVLMRKGSLIISDSLNHNSIVNGARG-- 204
+ F+ +A T I +R G II + H++ + +
Sbjct: 74 RASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLC 133
Query: 205 --SGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEI 262
GA +RV N L+ + + + R ++ + + ++ G E+
Sbjct: 134 ARVGAELRVIPLNPDGTLQLETLPTLFDEKTR--------LLAITHVSNVLGTENPLAEM 185
Query: 263 IAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG-GYIA 321
I + ++ A + +D A ++ + ++V D D + + K +G G G +
Sbjct: 186 ITLAHQHGAKVLVDGAQAV---------MHHPVDVQALDCDFYVFSGHKLYGPTGIGILY 236
Query: 322 GSKELIQYLKYTCPAHLYATSISP-----------------PAAEQIISAIKVILGEDGS 364
+ L+Q + ++S P II + E S
Sbjct: 237 VKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAAL--EYVS 294
Query: 365 SRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAF--SRECLRQN 422
+ G +A +N + + ++ + ++ +N K A+
Sbjct: 295 ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYG 354
Query: 423 VAVVTVAFPATPLLLAR-----ARICISASHTKEDLIKALEVISRVGDLVG 468
+AV T A PL+ R ++ +T E++ + + + R+ L+G
Sbjct: 355 IAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG 405
>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB
{Escherichia coli [TaxId: 562]}
Length = 450
Score = 37.5 bits (86), Expect = 0.003
Identities = 32/300 (10%), Positives = 71/300 (23%), Gaps = 26/300 (8%)
Query: 187 LIISDSLNHNSIVNGARGSGA---TIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIM 243
++ AR I + + + E E T
Sbjct: 154 NLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKR-MIEACDE---NTIGVVPTFG 208
Query: 244 VIVEGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVD 303
V G Y L + +++D A + + V
Sbjct: 209 VTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPD--IVWDFRLPRVK 266
Query: 304 IMMGTFTKSFGS---CGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG 360
+ + K + CG I +E + +L + + +
Sbjct: 267 SISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQY 326
Query: 361 EDGSSRGAQKLAR----IRENSNFFRSELQKMG-FEVLGDNDS-PVMPIML--YNPAKIP 412
+ G + + + + + E+ K+G +E + +P + + P
Sbjct: 327 YEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDP 386
Query: 413 AFSRECL-----RQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRVGDLV 467
++ L + V + RI + LE +
Sbjct: 387 GYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYL 446
>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase
(aminotransferase) {Synechococcus sp., strain GR6
[TaxId: 1131]}
Length = 427
Score = 36.8 bits (84), Expect = 0.005
Identities = 51/294 (17%), Positives = 83/294 (28%), Gaps = 35/294 (11%)
Query: 185 GSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMV 244
L+ + S + + G TP + E ++ AE V
Sbjct: 150 MFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEI------AGV 203
Query: 245 IVEGIYSMEG----ELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTA 300
I+E I G + + I ++ A + DE + GV E V
Sbjct: 204 ILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMT--GFRIAYGGVQEKFGVTP- 260
Query: 301 DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILG 360
D+ G G G +E++Q + P + T P A +L
Sbjct: 261 --DLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLR 318
Query: 361 EDG-----------SSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA 409
+ G S G +A+ ++ GF +
Sbjct: 319 QPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQ 378
Query: 410 KIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463
K F R L Q + + F S +HT+ED+ L V
Sbjct: 379 KFSRFHRGMLEQGIYLAPSQF---------EAGFTSLAHTEEDIDATLAAARTV 423
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 36.4 bits (83), Expect = 0.006
Identities = 60/381 (15%), Positives = 110/381 (28%), Gaps = 57/381 (14%)
Query: 111 LGFAASDEYCTPRVIESLKK--------YSPSTCSSRVDGGTLMVHNELEECVARFVGK- 161
LG D + E K+ Y P+ G L EL E +A + K
Sbjct: 30 LGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNI-------GLL----ELREAIAEKLKKQ 78
Query: 162 -------PAAIVFGMGYVTNSAILP-VLMRKGSLIISDSLNHNSIVNGARGSGATIRVFQ 213
I+ +G + ++ G ++ + S +G
Sbjct: 79 NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVP 138
Query: 214 HNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIV-----EGIYSMEGELCKFPEIIAICKK 268
+ E +T + ++I G + +L EI +
Sbjct: 139 TYEEDEFRLNVDELKKYVTDKT-----RALIINSPCNPTGAVLTKKDLE---EIADFVVE 190
Query: 269 YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCG---GYIAGSKE 325
+ + DE + + R + I + F+K+F G G++A
Sbjct: 191 HDLIVISDEVYEH-FIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVA---- 245
Query: 326 LIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSEL 385
+ + P +A K + E + L
Sbjct: 246 -APSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRL 304
Query: 386 QKMGFEVLGDNDSPVMPIMLYNPAKIP-AFSRECLRQ-NVAVVT-VAFPATPLLLARARI 442
+MG + + + + + FS L++ VAVV AF R
Sbjct: 305 NEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVR--- 361
Query: 443 CISASHTKEDLIKALEVISRV 463
IS + E L +A++ + RV
Sbjct: 362 -ISYATAYEKLEEAMDRMERV 381
>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating)
subunit 1 {Thermus thermophilus [TaxId: 274]}
Length = 437
Score = 34.4 bits (78), Expect = 0.026
Identities = 55/408 (13%), Positives = 109/408 (26%), Gaps = 44/408 (10%)
Query: 80 DVVERFSNDSNKTLKRTNKVNRC-LNLGSYN-YLGFAASDEYCTPRVIESLKKYSPSTCS 137
V+E + + L ++ L G + ++ + + Y P
Sbjct: 49 KVLEELRRLAAQNLP----AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQ 104
Query: 138 SRVDGGTLMVHNELEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGSLIISDSLNHNS 197
L E + +A G A T A L+ L
Sbjct: 105 GV-----LQATFEYQTMIAELAGLEIANASMYDGATALAEGV-LLALRETGRMGVLVSQG 158
Query: 198 IVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELC 257
+ R V + + ++L + G+ +++ +V + G L
Sbjct: 159 VHPEYRA------VLRAYLEAVGAKLLTLPLEGGRTPLPEVGEEVGAVVVQNPNFLGALE 212
Query: 258 KFPEIIAICKKYKAYIYLD-EAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSC 316
A + S+G + G ++ D + + MG FG
Sbjct: 213 DLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGPHFGFL 272
Query: 317 GG-----------------YIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA-IKVI 358
+ G + I L+ A + S ++A + +
Sbjct: 273 ATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAM 332
Query: 359 LGEDGSSRGAQKLA-RIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417
G +++A + E ++ + L ++ L P A R
Sbjct: 333 YLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPKDPEAVRRA 392
Query: 418 CLRQNVAVVTVAFPATP--LLLARARICISASHTKEDLIKALEVISRV 463
+ T L L + H +EDL+ E + V
Sbjct: 393 LAERGFHGATPVPREYGENLAL----FAATELHEEEDLLALREALKEV 436
>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium
[TaxId: 90371]}
Length = 376
Score = 34.2 bits (77), Expect = 0.031
Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 15/142 (10%)
Query: 148 HNELEECVARFVGKPAAIVFGMGYVTNSAILPVL-MRKGSLIISDSLNHNSIVNGARGSG 206
+ ELE R G A+ L L + +G +I+ S+ S +N G
Sbjct: 33 NQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLG 92
Query: 207 ATIRVFQHNTPSHL--EEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKFPEIIA 264
A + + + + E + I P K ++ V G I A
Sbjct: 93 ANPVMVDVDRDTLMVTPEHIEAAIT--------PQTKAIIPV----HYAGAPADLDAIYA 140
Query: 265 ICKKYKAYIYLDEAHSIGAVGK 286
+ ++Y + D AH+ G K
Sbjct: 141 LGERYGIPVIEDAAHATGTSYK 162
>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Escherichia coli [TaxId: 562]}
Length = 425
Score = 34.0 bits (77), Expect = 0.040
Identities = 33/237 (13%), Positives = 73/237 (30%), Gaps = 34/237 (14%)
Query: 243 MVIVEGIYSMEGELCKFPEIIA----ICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVD 298
+++E + G P + +C ++ + DE GA E +
Sbjct: 201 AIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADE-VQSGAGRTGTLFAMEQM--- 256
Query: 299 TADVDIMMGTFTKSFGSCG--GYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIK 356
V + TF KS + G E++ + YA + P A + +K
Sbjct: 257 --GVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGN--PIACVAALEVLK 312
Query: 357 VILGEDGSSRGAQKLARIRENSNFFRSELQK----------MGFEVLGDNDSPVMPIMLY 406
V E+ + ++++ + + + E+ D D
Sbjct: 313 VFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDH-----NKP 367
Query: 407 NPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463
+ + + +++ L RI + + + + LE+IS+
Sbjct: 368 DAKLTAEIVARARDKGLILLSCGPYYNVL-----RILVPLTIEDAQIRQGLEIISQC 419
>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium
yoelii yoelii [TaxId: 73239]}
Length = 404
Score = 32.4 bits (73), Expect = 0.12
Identities = 25/110 (22%), Positives = 34/110 (30%), Gaps = 12/110 (10%)
Query: 244 VIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKTGRG-VCELLEVD 298
IVE I G + + ICKKY DE TG G +LL V
Sbjct: 190 FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQ-------TGLGRTGKLLCVH 242
Query: 299 TADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAA 348
+V + K+ I+ + P +T P A
Sbjct: 243 HYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLA 292
>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp.
[TaxId: 1143]}
Length = 381
Score = 30.3 bits (66), Expect = 0.49
Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 389 GFEVLGDND--SPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISA 446
L + + ++ + +P A ++ Q + + T+A P R C
Sbjct: 309 HVHCLATSAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDC------IRACCHY 362
Query: 447 SHTKEDLIKALEVISRVG 464
+E++ L ++ G
Sbjct: 363 ITDEEEINHLLARLADFG 380
>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS
{Synechocystis sp. PCC 6803 [TaxId: 1148]}
Length = 408
Score = 29.5 bits (65), Expect = 0.94
Identities = 58/410 (14%), Positives = 121/410 (29%), Gaps = 54/410 (13%)
Query: 100 NRCLNLGSYNYLGFAASDEYCTPRVIESLKKY---SPSTCSSRVDGGTLMVHNELEEC-- 154
N+ +N YL AA+ V+E L Y + ++ + E
Sbjct: 15 NQEINGHPLVYLDNAAT-SQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRN 73
Query: 155 -VARFVGKPAAIVFGMGYVTNSAI-------LPVLMRKGSLIISDSLNHNSIVNGARGSG 206
VA+F+ + AI ++ G II+ + H+S +
Sbjct: 74 KVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLV------ 127
Query: 207 ATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPW---KKIMVIVEGIYSMEGELCKFPEII 263
++ T + L+ V ++ + K +V V I + G + EI
Sbjct: 128 -PWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIA 186
Query: 264 AICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGS 323
+ + A + +D S +L++ D G G
Sbjct: 187 QLAHQAGAKVLVDACQSAPHYPLD----VQLIDCDWLVASGHKMCAPTGIGFLYGKEEIL 242
Query: 324 KELIQYL-----KYTCPAHLYATSISP-------PAAEQIISAIKVI--LGEDGSSRGAQ 369
+ + + + T P PA + I+ + L + G
Sbjct: 243 EAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHN 302
Query: 370 KLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPA--FSRECLRQNVAVVT 427
+ ++ ++ + +N A + A + + +A+ +
Sbjct: 303 YEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRS 362
Query: 428 VAFPATPLLLARA-----RICISASHTKEDLIKALEVISRVGDLVGIKYF 472
PL R + +TKE++ L+ + I++F
Sbjct: 363 GHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT-----IRFF 407
>d1txda1 a.87.1.1 (A:766-999) Rho guanine nucleotide exchange factor
12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}
Length = 234
Score = 28.6 bits (63), Expect = 1.4
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 430 FPATPLLLARARICISASHTKEDLIKALEVISRVGDLVGIKYFPAEPRKQMEEEERMK 487
PLLL +E + KA + ++ + V + K+ E ++R++
Sbjct: 172 LTKYPLLLDNIAKYTEWPTEREKVKKAADHCRQILNFVN------QAVKEAENKQRLE 223
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase
{Pseudomonas cepacia [TaxId: 292]}
Length = 431
Score = 28.9 bits (63), Expect = 1.7
Identities = 35/239 (14%), Positives = 69/239 (28%), Gaps = 28/239 (11%)
Query: 240 KKIMVIVEGIYSMEGELC----KFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCELL 295
I E I S G + + C+ + LDEA + GR
Sbjct: 201 NLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTG-----VGRTGTMFA 255
Query: 296 EVDTA-DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISA 354
DI+ + T G I S + + P A +
Sbjct: 256 CQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRV 315
Query: 355 IKVILGEDGSSRGAQKLARIRENSNFFRSELQK----------MGFEVLGDNDSPVMPIM 404
+ V+ + +R R+R +G E++ D +
Sbjct: 316 LDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRT-----K 370
Query: 405 LYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463
+REC+ +++ V P + RI + +++++ L ++ +
Sbjct: 371 EPADGLGAKITRECMNLGLSMNIVQLPGMGGVF---RIAPPLTVSEDEIDLGLSLLGQA 426
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus
thermophilus [TaxId: 274]}
Length = 368
Score = 28.2 bits (61), Expect = 2.4
Identities = 27/233 (11%), Positives = 61/233 (26%), Gaps = 19/233 (8%)
Query: 236 HRPWKKIMVIV--EGIYSMEGELCKFPEIIAICKKYKAYIYLDEAHSIGAVGKTGRGVCE 293
P + +++ + + I + + + ++ DE + G+ R +
Sbjct: 149 LTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLR- 207
Query: 294 LLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIIS 353
+ + + A + +
Sbjct: 208 -----EFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAG 262
Query: 354 AIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPA 413
+ + R + L+ MG V + + A++P
Sbjct: 263 VAEALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVYVPEGT------YFLMAELPG 316
Query: 414 FS--RECLRQNVAVVT-VAFPATPLLLARARICISASHTKEDLIKALEVISRV 463
+ R VA++ AF R + +E+L ALE + RV
Sbjct: 317 WDAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKT--EEELHLALERLGRV 367
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas
vaginalis, MGL2 [TaxId: 5722]}
Length = 331
Score = 27.5 bits (60), Expect = 3.8
Identities = 47/306 (15%), Positives = 88/306 (28%), Gaps = 27/306 (8%)
Query: 151 LEECVARFVGKPAAIVFGMGYVTNSAILPVLMRKGS-LIISDSLNHNSIVNGARGSGATI 209
LE +A+ A G +A + ++ G LI D L G T
Sbjct: 3 LEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCL-----------YGCTH 51
Query: 210 RVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSME-GELCKFPEIIAICKK 268
+F+H EV +A ++ + ++ + + +K
Sbjct: 52 ALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARK 111
Query: 269 YKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFG----SCGGYIAGSK 324
K + + + + VDI++ + TK G +
Sbjct: 112 QKDILVIVDNTFASPILT---------NPLDLGVDIVVHSATKYINGHTDVVAGLVCSRA 162
Query: 325 ELIQYLKYTCPAHLYATSISPPAAEQIISAIKV-ILGEDGSSRGAQKLARIRENSNFFRS 383
++I +K + ISP A I + ++ AQK+A +
Sbjct: 163 DIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKK 222
Query: 384 ELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARIC 443
+ G + M + E ++ + V A L + I
Sbjct: 223 VYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLGGPESLIQ 282
Query: 444 ISASHT 449
AS T
Sbjct: 283 HPASMT 288
>d1v54i_ f.23.3.1 (I:) Mitochondrial cytochrome c oxidase subunit
VIc {Cow (Bos taurus) [TaxId: 9913]}
Length = 73
Score = 25.0 bits (55), Expect = 6.3
Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 13/53 (24%)
Query: 446 ASHTKEDLIKALEVISRVGDLVGIKYFPAEPRKQ-----------MEEEERMK 487
A + ++ A V K+ AE RK+ M++ E M+
Sbjct: 14 ARRLRFHIVGAFMVSLGFA--TFYKFAVAEKRKKAYADFYRNYDSMKDFEEMR 64
>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 404
Score = 26.6 bits (58), Expect = 6.7
Identities = 33/231 (14%), Positives = 70/231 (30%), Gaps = 33/231 (14%)
Query: 244 VIVEGIYSMEGELCK----FPEIIAICKKYKAYIYLDEAHSIGAVGKTG-RGVCELLEVD 298
+VE I G + + +C +++ DE TG L VD
Sbjct: 192 FMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-------TGLARTGRWLAVD 244
Query: 299 TADV--DIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIK 356
+V DI+ K+ ++ + P ++T P ++ A
Sbjct: 245 YENVRPDIV--LLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAAL 302
Query: 357 VILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGD--NDSPVMPIMLYNPAKIPA- 413
+L E+ + R+EL K+ +V+ + I++ A
Sbjct: 303 EVLEEENL------AENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAW 356
Query: 414 -FSRECLRQNVAVVTVAFPATPLLLARARICISASHTKEDLIKALEVISRV 463
+ R +++L +++E+I++
Sbjct: 357 KVCLRLRDNGLLAKPTHGDI-------IRFAPPLVIKEDELRESIEIINKT 400
>d1kkxa_ a.4.3.1 (A:) Transcription regulator Adr6 (Swi1) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 102
Score = 25.2 bits (55), Expect = 7.6
Identities = 13/72 (18%), Positives = 26/72 (36%)
Query: 24 QIRDFFRKIIDWWSANNLQGYAPICLGLEDFYIRRLYLRIQDCFGRPISSAPDAWFDVVE 83
Q F + +I+ N+ + +G + LY+ +Q G + W V +
Sbjct: 4 QYELFMKSLIENCKKRNMPLQSIPEIGNRKINLFYLYMLVQKFGGADQVTRTQQWSMVAQ 63
Query: 84 RFSNDSNKTLKR 95
R + L+
Sbjct: 64 RLQISDYQQLES 75
>d1gxya_ d.166.1.3 (A:) Eukaryotic mono-ADP-ribosyltransferase
ART2.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 223
Score = 26.4 bits (58), Expect = 8.1
Identities = 7/56 (12%), Positives = 11/56 (19%), Gaps = 13/56 (23%)
Query: 61 LRIQDCFGRPISS------------APDAWFDVVERFSNDSNKTLKRTNKVNRCLN 104
I+ C G I + V + L + N
Sbjct: 165 FIIKTCLGVYIKEFSFRPDQEEVLIPGYEVYQKVRT-QGYNEIFLDSPKRKKSNYN 219
>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine
aminotransferase ArgD {Thermus thermophilus [TaxId:
274]}
Length = 387
Score = 26.6 bits (58), Expect = 8.2
Identities = 44/262 (16%), Positives = 83/262 (31%), Gaps = 42/262 (16%)
Query: 209 IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIMVIVE------GIYSMEGELCKFPEI 262
+ +N L+ + E+ A VI+E G+ E
Sbjct: 159 VEFIPYNDVEALKRAVDEETA-------------AVILEPVQGEGGVRPATPEF--LRAA 203
Query: 263 IAICKKYKAYIYLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAG 322
I ++ A + LDE + +G+TG+ E DI+ T + GG G
Sbjct: 204 REITQEKGALLILDEIQTG--MGRTGKRFAF--EHFGIVPDIL----TLAKALGGGVPLG 255
Query: 323 SKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFR 382
+ + + + P + T+ + + R E +F
Sbjct: 256 VAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIR-----YLERTRLWERAAELGPWFM 310
Query: 383 SELQKMGFEVLGD-NDSPVMPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARAR 441
+L+ + + + +M + P +R V +A A P ++ R
Sbjct: 311 EKLRAIPSPKIREVRGMGLMVGLELKEKAAPYIARLEKEHRV----LALQAGPTVI---R 363
Query: 442 ICISASHTKEDLIKALEVISRV 463
KEDL + +E + V
Sbjct: 364 FLPPLVIEKEDLERVVEAVRAV 385
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.411
Gapped
Lambda K H
0.267 0.0442 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,888,524
Number of extensions: 92247
Number of successful extensions: 309
Number of sequences better than 10.0: 1
Number of HSP's gapped: 294
Number of HSP's successfully gapped: 42
Length of query: 489
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 400
Effective length of database: 1,185,626
Effective search space: 474250400
Effective search space used: 474250400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.7 bits)