BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046231
ECGHVKELGFVWLKHKQKKKHKFENVVVWFDTEVTAYFERNKIKNLTGVKAKEFLIWISL
CEIYVNGSSPNGSITFKTPAGLS

High Scoring Gene Products

Symbol, full name Information P value
AT5G49600 protein from Arabidopsis thaliana 4.0e-19
SVB
SMALLER WITH VARIABLE BRANCHES
protein from Arabidopsis thaliana 7.9e-14
AT1G09310 protein from Arabidopsis thaliana 1.3e-13
AT5G46230 protein from Arabidopsis thaliana 1.3e-13
AT4G24130 protein from Arabidopsis thaliana 3.2e-10
AT1G30020 protein from Arabidopsis thaliana 3.6e-09
AT4G02370 protein from Arabidopsis thaliana 0.00012
AT1G02816 protein from Arabidopsis thaliana 0.00048

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046231
        (83 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2157824 - symbol:AT5G49600 "AT5G49600" species...   229  4.0e-19   1
TAIR|locus:2027579 - symbol:SVB "SMALLER WITH VARIABLE BR...   179  7.9e-14   1
TAIR|locus:2203043 - symbol:AT1G09310 species:3702 "Arabi...   177  1.3e-13   1
TAIR|locus:2170463 - symbol:AT5G46230 species:3702 "Arabi...   177  1.3e-13   1
TAIR|locus:2134966 - symbol:AT4G24130 species:3702 "Arabi...   145  3.2e-10   1
TAIR|locus:2198247 - symbol:AT1G30020 species:3702 "Arabi...   135  3.6e-09   1
TAIR|locus:2133264 - symbol:AT4G02370 "AT4G02370" species...    93  0.00012   1
TAIR|locus:505006096 - symbol:AT1G02816 "AT1G02816" speci...    88  0.00048   1


>TAIR|locus:2157824 [details] [associations]
            symbol:AT5G49600 "AT5G49600" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB023033
            UniGene:At.49149 UniGene:At.66766 Gene3D:2.30.240.10
            InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            HOGENOM:HOG000237639 EMBL:AY735717 EMBL:AY773904 IPI:IPI00545062
            RefSeq:NP_199771.1 ProteinModelPortal:Q9FGY5 DNASU:835022
            EnsemblPlants:AT5G49600.1 GeneID:835022 KEGG:ath:AT5G49600
            TAIR:At5g49600 eggNOG:NOG326491 InParanoid:Q9FGY5 OMA:WISLGEI
            PhylomeDB:Q9FGY5 ProtClustDB:CLSN2916584 ArrayExpress:Q9FGY5
            Genevestigator:Q9FGY5 Uniprot:Q9FGY5
        Length = 171

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 53/92 (57%), Positives = 60/92 (65%)

Query:     1 ECGHVKELGFVWLXXXXXXXXX----------FENVVVWFDTEVTAYFERNKIKNLTGVK 50
             ECG+VK+ GFVWL                   F+NVVV F+ EVTAYFE N+IK LTGVK
Sbjct:    44 ECGYVKDTGFVWLKHKEKKKEDQKRRYQDLLRFDNVVVCFEDEVTAYFEPNRIKKLTGVK 103

Query:    51 AKEFLIWISLCEIYVNGSSPNGSITFKTPAGL 82
             AKEF++WISL EI VN SS  G ITFKT  GL
Sbjct:   104 AKEFMVWISLGEIQVNRSS--GLITFKTEVGL 133


>TAIR|locus:2027579 [details] [associations]
            symbol:SVB "SMALLER WITH VARIABLE BRANCHES" species:3702
            "Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0042546
            "cell wall biogenesis" evidence=RCA] EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0010090 EMBL:AC009323
            Gene3D:2.30.240.10 InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            HOGENOM:HOG000237639 EMBL:AY058110 EMBL:AY101534 IPI:IPI00541405
            PIR:E96607 RefSeq:NP_564720.1 UniGene:At.22256 UniGene:At.68102
            ProteinModelPortal:Q9FXB0 SMR:Q9FXB0 STRING:Q9FXB0 PaxDb:Q9FXB0
            PRIDE:Q9FXB0 DNASU:842112 EnsemblPlants:AT1G56580.1 GeneID:842112
            KEGG:ath:AT1G56580 TAIR:At1g56580 eggNOG:NOG238549
            InParanoid:Q9FXB0 OMA:GKINFRT PhylomeDB:Q9FXB0
            ProtClustDB:CLSN2719841 Genevestigator:Q9FXB0 Uniprot:Q9FXB0
        Length = 166

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 39/85 (45%), Positives = 51/85 (60%)

Query:     1 ECGHVKELGFVWLXXXXXXXXXFENV--VVWFDTEVTAYFERNKIKNLTGVKAKEFLIWI 58
             E G+ +E G VWL         FE +  +V + TEV A  E  KIK LTGVKAKE LIW+
Sbjct:    46 EVGYDRETGIVWLKQKKSITHKFEAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWV 105

Query:    59 SLCEIYVNGSSPNGSITFKTPAGLS 83
             +L E+ +   + +G I F+TP GLS
Sbjct:   106 TLNELVLEQPTSSGKINFRTPTGLS 130


>TAIR|locus:2203043 [details] [associations]
            symbol:AT1G09310 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0048046 "apoplast"
            evidence=IDA] [GO:0019344 "cysteine biosynthetic process"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048046
            EMBL:AC006416 UniGene:At.23432 Gene3D:2.30.240.10
            InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            HOGENOM:HOG000237639 ProtClustDB:CLSN2719841 EMBL:AF348589
            EMBL:AY045914 EMBL:AY079406 EMBL:AY084527 IPI:IPI00534551
            PIR:B86226 RefSeq:NP_563841.1 UniGene:At.71681 IntAct:Q9ZPZ4
            STRING:Q9ZPZ4 PaxDb:Q9ZPZ4 PRIDE:Q9ZPZ4 ProMEX:Q9ZPZ4
            EnsemblPlants:AT1G09310.1 GeneID:837452 KEGG:ath:AT1G09310
            TAIR:At1g09310 eggNOG:NOG293145 InParanoid:Q9ZPZ4 OMA:TINEIYT
            PhylomeDB:Q9ZPZ4 ArrayExpress:Q9ZPZ4 Genevestigator:Q9ZPZ4
            Uniprot:Q9ZPZ4
        Length = 179

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 41/85 (48%), Positives = 49/85 (57%)

Query:     1 ECGHVKELGFVWLXXXXXXXXXFENV--VVWFDTEVTAYFERNKIKNLTGVKAKEFLIWI 58
             E G+ +E G VWL         F  +  +V + TEVTA  E  KIK LTGVKAKE LIW+
Sbjct:    46 EVGYDRESGVVWLKQKKSITHKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWV 105

Query:    59 SLCEIYVNGSSPNGSITFKTPAGLS 83
             ++ EIY     P   ITFKTP  LS
Sbjct:   106 TINEIYTE--EPPTKITFKTPTTLS 128


>TAIR|locus:2170463 [details] [associations]
            symbol:AT5G46230 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688 EMBL:AB010698
            Gene3D:2.30.240.10 InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            EMBL:AY085507 EMBL:BT026341 IPI:IPI00548422 RefSeq:NP_568659.1
            UniGene:At.29966 ProteinModelPortal:Q9FL37 SMR:Q9FL37 STRING:Q9FL37
            PRIDE:Q9FL37 DNASU:834665 EnsemblPlants:AT5G46230.1 GeneID:834665
            KEGG:ath:AT5G46230 TAIR:At5g46230 InParanoid:Q9FL37 OMA:VTISEIF
            PhylomeDB:Q9FL37 ProtClustDB:CLSN2917739 Genevestigator:Q9FL37
            Uniprot:Q9FL37
        Length = 143

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 36/85 (42%), Positives = 50/85 (58%)

Query:     1 ECGHVKELGFVWLXXXXXXXXXFENVV--VWFDTEVTAYFERNKIKNLTGVKAKEFLIWI 58
             E GH K  G+VW+         F+ +   V +D+EVTA  E  ++  LTG+K+KE LIW+
Sbjct:    48 EIGHNKSTGYVWIKIKNKVQHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWV 107

Query:    59 SLCEIYVNGSSPNGSITFKTPAGLS 83
             ++ EI+VN   P   ITF  P GLS
Sbjct:   108 TISEIFVNHQDPT-QITFANPTGLS 131


>TAIR|locus:2134966 [details] [associations]
            symbol:AT4G24130 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005634 "nucleus"
            evidence=IDA] GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AC002343 EMBL:AL161560 EMBL:AL109619 Gene3D:2.30.240.10
            InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562 EMBL:BT008528
            EMBL:AK118183 IPI:IPI00523393 PIR:T13461 RefSeq:NP_194144.1
            UniGene:At.43869 PaxDb:O22978 PRIDE:O22978
            EnsemblPlants:AT4G24130.1 GeneID:828513 KEGG:ath:AT4G24130
            TAIR:At4g24130 eggNOG:NOG301239 HOGENOM:HOG000237639
            InParanoid:O22978 OMA:TNTRVSY PhylomeDB:O22978
            ProtClustDB:CLSN2685388 Genevestigator:O22978 Uniprot:O22978
        Length = 157

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 30/84 (35%), Positives = 47/84 (55%)

Query:     1 ECGHVKELGFVWLXXXXXXXXXFE--NVVVWFDTEVTAYFERNKIKNLTGVKAKEFLIWI 58
             ECG V+  G+VW+         FE  N  V +  EVTAY ++  +K +TGVK+K+  +W+
Sbjct:    50 ECGRVRATGYVWMKQDTPYEHFFEATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWV 109

Query:    59 SLCEIYVNGSSPNGSITFKTPAGL 82
              + E+ +     +  I FKTP G+
Sbjct:   110 PIVEMSME-EPKSKKIYFKTPMGI 132


>TAIR|locus:2198247 [details] [associations]
            symbol:AT1G30020 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC022455 Gene3D:2.30.240.10
            InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            HOGENOM:HOG000237639 IPI:IPI00534646 PIR:B86424 RefSeq:NP_174295.1
            UniGene:At.24783 UniGene:At.73038 ProteinModelPortal:Q9C8R7
            PaxDb:Q9C8R7 PRIDE:Q9C8R7 DNASU:839881 EnsemblPlants:AT1G30020.1
            GeneID:839881 KEGG:ath:AT1G30020 TAIR:At1g30020 eggNOG:NOG327436
            PhylomeDB:Q9C8R7 ProtClustDB:CLSN2914491 Genevestigator:Q9C8R7
            Uniprot:Q9C8R7
        Length = 157

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query:     1 ECGHVKELGFVWLXXXXXXXXXFENVV--VWFDTEVTAYFERNKIKNLTGVKAKEFLIWI 58
             E G+ K  GFVW+         F  +   V +DTE+TA+ E  +++ LTGVK+KE +IW+
Sbjct:    48 EVGYNKTKGFVWMRMRSKIEHTFREIGRRVLYDTEITAFVEDRRMRRLTGVKSKELMIWV 107

Query:    59 SLCEIYV 65
              + +I++
Sbjct:   108 PVNDIFI 114


>TAIR|locus:2133264 [details] [associations]
            symbol:AT4G02370 "AT4G02370" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0005773 "vacuole" evidence=IDA]
            [GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0048767 "root
            hair elongation" evidence=RCA] GO:GO:0005774 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161494 EMBL:AF069298
            Gene3D:2.30.240.10 InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            EMBL:AF360333 EMBL:AY056340 IPI:IPI00541862 PIR:T01313
            RefSeq:NP_567230.1 UniGene:At.22062 UniGene:At.74049
            ProteinModelPortal:O81296 PaxDb:O81296 PRIDE:O81296
            EnsemblPlants:AT4G02370.1 GeneID:828057 KEGG:ath:AT4G02370
            TAIR:At4g02370 eggNOG:NOG308814 HOGENOM:HOG000238027
            InParanoid:O81296 OMA:NGDEMEF PhylomeDB:O81296
            ProtClustDB:CLSN2687629 Genevestigator:O81296 Uniprot:O81296
        Length = 167

 Score = 93 (37.8 bits), Expect = 0.00012, P = 0.00012
 Identities = 15/45 (33%), Positives = 26/45 (57%)

Query:    30 FDTEVTAYFERNKIKNLTGVKAKEFLIWISLCEIYVNGSSPNGSI 74
             + + ++ Y   NK+K LTGVK K   +W+++ E+  NG     S+
Sbjct:    82 YKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSV 126


>TAIR|locus:505006096 [details] [associations]
            symbol:AT1G02816 "AT1G02816" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            EMBL:CP002684 GO:GO:0005774 EMBL:AC009525 Gene3D:2.30.240.10
            InterPro:IPR007493 Pfam:PF04398 SUPFAM:SSF141562
            ProtClustDB:CLSN2687629 EMBL:AF386977 EMBL:AY072513 EMBL:AY086837
            EMBL:DQ446222 IPI:IPI00520001 PIR:C86158 RefSeq:NP_563664.1
            UniGene:At.11715 ProteinModelPortal:Q9SRX5 PRIDE:Q9SRX5
            EnsemblPlants:AT1G02816.1 GeneID:839308 KEGG:ath:AT1G02816
            KEGG:dosa:Os05t0362300-01 KEGG:dosa:Os05t0362500-01 TAIR:At1g02816
            InParanoid:Q9SRX5 OMA:ENFLECP PhylomeDB:Q9SRX5
            Genevestigator:Q9SRX5 Uniprot:Q9SRX5
        Length = 166

 Score = 88 (36.0 bits), Expect = 0.00048, P = 0.00048
 Identities = 15/45 (33%), Positives = 25/45 (55%)

Query:    30 FDTEVTAYFERNKIKNLTGVKAKEFLIWISLCEIYVNGSSPNGSI 74
             + + ++ Y   NKI  LTGVK K   +W+++ E+  NG     S+
Sbjct:    82 YKSTISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSV 126


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.444    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       83        74   0.00091  102 3  11 22  0.37    29
                                                     29  0.46    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  530 (56 KB)
  Total size of DFA:  108 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.16u 0.12s 7.28t   Elapsed:  00:00:02
  Total cpu time:  7.16u 0.12s 7.28t   Elapsed:  00:00:02
  Start:  Sat May 11 02:46:05 2013   End:  Sat May 11 02:46:07 2013

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