BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046237
(137 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242061544|ref|XP_002452061.1| hypothetical protein SORBIDRAFT_04g017843 [Sorghum bicolor]
gi|241931892|gb|EES05037.1| hypothetical protein SORBIDRAFT_04g017843 [Sorghum bicolor]
Length = 503
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 18/146 (12%)
Query: 3 QRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGS 62
+++ L PW F + L V+ E G + + F WI++HK+PL MT+ G L G
Sbjct: 4 RQKTLEEGPWMFGKELVVVAEFEGNKTIDEVDFFFIPIWIRVHKMPLGLMTREAGELIGE 63
Query: 63 MIGEVEEVDKG-------------VKINITRPLMRGLTVQL-EGE-ENLSTVEVYYERLP 107
M+G+V +VD V+++I +PLMRG+T+ + +G+ EN + YE LP
Sbjct: 64 MVGKVLDVDADENGRAVGEFLRIKVRLDIRKPLMRGVTLDIGDGDHENNKWCPLVYEFLP 123
Query: 108 DFCFQRGRIGHVFRECPYL---KSSP 130
DFCF G IGHV R CPY +SSP
Sbjct: 124 DFCFICGLIGHVDRACPYYAQNRSSP 149
>gi|218187613|gb|EEC70040.1| hypothetical protein OsI_00627 [Oryza sativa Indica Group]
Length = 1499
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 14/127 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW + F++TE G S LN W++++ LPL MT+ +G L G+ +GEV +V
Sbjct: 114 PWIYQGDAFLITEYDGKSRPSDVKLNSLPVWVRIYDLPLSMMTETMGKLIGARLGEVRKV 173
Query: 71 ---DKG------VKINITRPLMRGLT--VQLEGEENLSTVEVY---YERLPDFCFQRGRI 116
D+G +++ P+ + LT ++L+ +E+ S V+ Y YER+P FCF G I
Sbjct: 174 AVDDQGRAWDDFMRVRAEHPVDKSLTRWLKLKDKESSSVVQRYDVKYERIPRFCFYYGHI 233
Query: 117 GHVFREC 123
GH+ REC
Sbjct: 234 GHMEREC 240
>gi|332322140|emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 465
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D+ +++ RPWSF++ L +L E S L FW++++ LP+ ++ + G
Sbjct: 88 DKEKVMAGRPWSFDQSLVLLQEIDADVQPSNVRLTHSPFWVRVYNLPMRCRSEQHIRMIG 147
Query: 62 SMIGEVEEVDKG-----------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFC 110
IG+V EVD V I+IT+PL R L+ + + VE+ YERLP FC
Sbjct: 148 GCIGDVLEVDTHEILWDKSARIRVLIDITKPLRRVQRFALKNGVS-ALVEIKYERLPTFC 206
Query: 111 FQRGRIGHVFREC 123
F G IGH+ R+C
Sbjct: 207 FLCGVIGHIGRDC 219
>gi|222617844|gb|EEE53976.1| hypothetical protein OsJ_00596 [Oryza sativa Japonica Group]
Length = 1066
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 14/127 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW + F++TE G S LN W++++ LPL MT+ +G L G+ +GEV +V
Sbjct: 114 PWIYQGDAFLITEYDGKSRPSDVKLNSLPVWVRIYDLPLSMMTETMGKLIGARLGEVRKV 173
Query: 71 ---DKG------VKINITRPLMRGLT--VQLEGEENLSTVEVY---YERLPDFCFQRGRI 116
D+G +++ P+ + LT ++L+ +E+ S V+ Y YER+P FCF G I
Sbjct: 174 AVDDQGRAWDDFMRVRAEHPVDKPLTCWLKLKDKESSSVVQRYDVKYERIPRFCFYCGHI 233
Query: 117 GHVFREC 123
GH+ REC
Sbjct: 234 GHMEREC 240
>gi|110288692|gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ GI S L+ W++++ LPL+ MTKV G +FGS +G+V EV
Sbjct: 304 PWIHRGDALLVASFDGITCPSNVPLDVVPIWVRIYDLPLVLMTKVRGEMFGSKLGKVREV 363
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D G V + + RPL + +++ +G+E L +++YER+P FCF G
Sbjct: 364 DVGDDGRNKHDFFHIRVDLPVKRPLKSQIAIRMTVQGKEVLRRFDLHYERVPHFCFICGF 423
Query: 116 IGHVFREC 123
IGH R+C
Sbjct: 424 IGHSDRDC 431
>gi|22711564|gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ GI S L+ W++++ LPL+ MTKV G +FGS +G+V EV
Sbjct: 304 PWIHRGDALLVASFDGITCPSNVPLDVVPIWVRIYDLPLVLMTKVRGEMFGSKLGKVREV 363
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D G V + + RPL + +++ +G+E L +++YER+P FCF G
Sbjct: 364 DVGDDGRNKHDFFHIRVDLPVKRPLKSQIAIRMTVQGKEVLRRFDLHYERVPHFCFICGF 423
Query: 116 IGHVFREC 123
IGH R+C
Sbjct: 424 IGHSDRDC 431
>gi|222612512|gb|EEE50644.1| hypothetical protein OsJ_30864 [Oryza sativa Japonica Group]
Length = 680
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ GI S L+ W++++ LPL+ MTKV G +FGS +G+V EV
Sbjct: 304 PWIHRGDALLVASFDGITCPSNVPLDVVPIWVRIYDLPLVLMTKVRGEMFGSKLGKVREV 363
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D G V + + RPL + +++ +G+E L +++YER+P FCF G
Sbjct: 364 DVGDDGRNKHDFFHIRVDLPVKRPLKSQIAIRMTVQGKEVLRRFDLHYERVPHFCFICGF 423
Query: 116 IGHVFREC 123
IGH R+C
Sbjct: 424 IGHSDRDC 431
>gi|33465891|gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
Length = 2367
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +L PW ++ E G+ + S NL+ W++++ LPL+ M + G L+G
Sbjct: 406 DYNFVLQGDPWLHRGDALLVAEFNGLLNPSMVNLDTVPIWVRIYDLPLVMMNRARGELYG 465
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERL 106
S +G+V EVD V + + RPL R L +++ +G+E + YER+
Sbjct: 466 SKMGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLRRMLAIKIKVQGKEETRRFHLRYERV 525
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH +EC
Sbjct: 526 PHFCFFCGFIGHSDKEC 542
>gi|77554244|gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R ++ PW ++ E GI SK L+ W++++ LPL+ MTK G ++G
Sbjct: 246 DYRFVIQGGPWIHRGDALLVAEFDGITCPSKVTLDVIPVWVRIYDLPLVLMTKARGEIYG 305
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLST--VEVYYERL 106
S +G V EVD G +++ RPL LT+++ + + T + YER+
Sbjct: 306 SKLGRVREVDVGDDGRNKHDFFRIRADLSVKRPLKDKLTIKISAQGRVETRSFALRYERV 365
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G +GH ++C
Sbjct: 366 PHFCFICGFMGHADKDC 382
>gi|222612692|gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 3 QRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGS 62
+RR L PW FN+ L V+ + F W++ KLPL MTK G+ G
Sbjct: 58 KRRALEDGPWMFNKDLVVMIDLDETKLIEDMIFAFVPIWVRAMKLPLGLMTKETGMAIGR 117
Query: 63 MIGEVEEVDK-------------GVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDF 109
+GE +D ++I+I +PLMRG+T+ + +E + YE LPDF
Sbjct: 118 EVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYEFLPDF 177
Query: 110 CFQRGRIGHVFREC 123
C+ G +GH + C
Sbjct: 178 CYICGIVGHTEKLC 191
>gi|20279456|gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 3 QRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGS 62
+RR L PW FN+ L V+ + F W++ KLPL MTK G+ G
Sbjct: 55 KRRALEDGPWMFNKDLVVMIDLDETKLIEDMIFAFVPIWVRAMKLPLGLMTKETGMAIGR 114
Query: 63 MIGEVEEVDK-------------GVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDF 109
+GE +D ++I+I +PLMRG+T+ + +E + YE LPDF
Sbjct: 115 EVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYEFLPDF 174
Query: 110 CFQRGRIGHVFREC 123
C+ G +GH + C
Sbjct: 175 CYICGIVGHTEKLC 188
>gi|110288963|gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 3 QRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGS 62
+RR L PW FN+ L V+ + F W++ KLPL MTK G+ G
Sbjct: 51 KRRALEDGPWMFNKDLVVMIDLDETKLIEDMIFAFVPIWVRAMKLPLGLMTKETGMAIGR 110
Query: 63 MIGEVEEVDK-------------GVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDF 109
+GE +D ++I+I +PLMRG+T+ + +E + YE LPDF
Sbjct: 111 EVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLVYEFLPDF 170
Query: 110 CFQRGRIGHVFREC 123
C+ G +GH + C
Sbjct: 171 CYICGIVGHTEKLC 184
>gi|222635572|gb|EEE65704.1| hypothetical protein OsJ_21338 [Oryza sativa Japonica Group]
Length = 901
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + +L PW ++ + G+ S L W++++ LPL+ M K G L+G
Sbjct: 327 DHKFVLQGGPWIHRGDALIVADFNGLLSPSMVPLESVPIWVRIYDLPLVMMNKARGELYG 386
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMR--GLTVQLEGEENLSTVEVYYERL 106
S +G+V EVD V + + RPL R + ++++G E + + YER+
Sbjct: 387 SKLGKVREVDVQQNGSNKHDFFRIRVDLPVNRPLKRQIAIKIKIKGAEEIRRFNLRYERV 446
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH +EC
Sbjct: 447 PHFCFFCGFIGHSDKEC 463
>gi|218194668|gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indica Group]
Length = 1296
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + +L PW ++ + G+ S L W++++ LPL+ M K G+++G
Sbjct: 198 DHKFVLQGGPWLHRGDALLVADFNGLVSPSMVPLETVPIWVRIYDLPLVMMNKERGVIYG 257
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERL 106
S +G+V EVD V + + RPL R L +++ +G E + + YER+
Sbjct: 258 SKLGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLKRMLAIKIKVKGAEEIRRFNLRYERI 317
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH +EC
Sbjct: 318 PHFCFFCGFIGHSDKEC 334
>gi|222628689|gb|EEE60821.1| hypothetical protein OsJ_14430 [Oryza sativa Japonica Group]
Length = 448
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + +L PW ++ + G+ S L W++++ LPL+ M K G+++G
Sbjct: 78 DHKFVLQGGPWLHRGDALLVADFNGLVSPSMVPLETMPIWVRIYDLPLVMMNKERGVIYG 137
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERL 106
S +G+V EVD V + + RPL R L +++ +G E + + YER+
Sbjct: 138 SKLGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLKRMLAIKIKVKGAEEIRRFNLRYERI 197
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH +EC
Sbjct: 198 PHFCFFCGFIGHSDKEC 214
>gi|32483159|emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group]
gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza sativa Indica Group]
gi|116309230|emb|CAH66320.1| OSIGBa0150M16.3 [Oryza sativa Indica Group]
Length = 1711
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + +L PW ++ + G+ S L W++++ LPL+ M K G+++G
Sbjct: 218 DHKFVLQGGPWLHRGDALLVADFNGLVSPSMVPLETMPIWVRIYDLPLVMMNKERGVIYG 277
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERL 106
S +G+V EVD V + + RPL R L +++ +G E + + YER+
Sbjct: 278 SKLGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLKRMLAIKIKVKGAEEIRRFNLRYERI 337
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH +EC
Sbjct: 338 PHFCFFCGFIGHSDKEC 354
>gi|38346596|emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
Length = 1285
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + +L PW ++ + G+ S L W++++ LPL+ M K G+++G
Sbjct: 218 DHKFVLQGGPWLHRGDALLVADFNGLVSPSMVPLETMPIWVRIYDLPLVMMNKERGVIYG 277
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERL 106
S +G+V EVD V + + RPL R L +++ +G E + + YER+
Sbjct: 278 SKLGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLKRMLAIKIKVKGAEEIRRFNLRYERI 337
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH +EC
Sbjct: 338 PHFCFFCGFIGHSDKEC 354
>gi|218197221|gb|EEC79648.1| hypothetical protein OsI_20883 [Oryza sativa Indica Group]
Length = 456
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E G+ S L WI+++ LPL+ MTK G L+GS G V EV
Sbjct: 162 PWLHRGDALLVAEFNGLTSPSNIPLEVVPIWIRIYDLPLVLMTKARGELYGSKFGRVREV 221
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D V + +T+PL + +++ G E + +V YER+P FCF G
Sbjct: 222 DVEADGRNRHDFFRIRVDLPVTKPLKSKIAIKINVHGSEEIKRFDVRYERIPYFCFFCGF 281
Query: 116 IGHVFREC 123
IGH ++C
Sbjct: 282 IGHSDKDC 289
>gi|222635595|gb|EEE65727.1| hypothetical protein OsJ_21368 [Oryza sativa Japonica Group]
Length = 1038
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E G+ + S L+ W++++ LPL+ M K G L+GS IG+V EV
Sbjct: 156 PWLHRGDAILVAEFDGLTNPSMVPLDTVPIWVRVYDLPLVMMNKARGDLYGSKIGKVREV 215
Query: 71 DKG-------------VKINITRPLMRGLTVQLE--GEENLSTVEVYYERLPDFCFQRGR 115
D V + + +PL L ++++ G+E V YER+P FCF G
Sbjct: 216 DVDAFGSNRHDFFRIRVDLPVNKPLKTKLDIKIKINGKEETRKFNVRYERVPHFCFSCGF 275
Query: 116 IGHVFREC 123
IGH +EC
Sbjct: 276 IGHSDKEC 283
>gi|218197959|gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indica Group]
Length = 754
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E G+ S L WI+++ LPL+ MTK G L+GS G V EV
Sbjct: 263 PWLHRGDALLVAEFNGLTSPSNIPLEVVPIWIRIYDLPLVLMTKARGELYGSKFGRVREV 322
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D V + +T+PL + +++ G E + +V YER+P FCF G
Sbjct: 323 DVEADGRNRHDFFRIRVDLPVTKPLKSKIAIKINVHGSEEIKRFDVRYERIPYFCFFCGF 382
Query: 116 IGHVFREC 123
IGH ++C
Sbjct: 383 IGHSDKDC 390
>gi|62733988|gb|AAX96097.1| Transposable element protein, putative [Oryza sativa Japonica
Group]
gi|77549683|gb|ABA92480.1| hypothetical protein LOC_Os11g16250 [Oryza sativa Japonica Group]
Length = 594
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E GI S+ L W++++ LPL+ MTK G L+GS +G V E+
Sbjct: 254 PWIHRGDALLVGEFDGITSPSRVPLEVVPIWVRIYDLPLVLMTKARGELYGSKLGRVREI 313
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D V++++ RPL L +++ +G E + ++ YER+P FC G
Sbjct: 314 DVEEDGRNKHDSFRIRVELSVKRPLRSKLAIKINVQGNEVVRRFDLRYERVPHFCLICGF 373
Query: 116 IGHVFREC 123
IGH ++C
Sbjct: 374 IGHSDKDC 381
>gi|222615805|gb|EEE51937.1| hypothetical protein OsJ_33563 [Oryza sativa Japonica Group]
Length = 567
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E GI S+ L W++++ LPL+ MTK G L+GS +G V E+
Sbjct: 227 PWIHRGDALLVGEFDGITSPSRVPLEVVPIWVRIYDLPLVLMTKARGELYGSKLGRVREI 286
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D V++++ RPL L +++ +G E + ++ YER+P FC G
Sbjct: 287 DVEEDGRNKHDSFRIRVELSVKRPLRSKLAIKINVQGNEVVRRFDLRYERVPHFCLICGF 346
Query: 116 IGHVFREC 123
IGH ++C
Sbjct: 347 IGHSDKDC 354
>gi|218185542|gb|EEC67969.1| hypothetical protein OsI_35723 [Oryza sativa Indica Group]
Length = 567
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E GI S+ L W++++ LPL+ MTK G L+GS +G V E+
Sbjct: 227 PWIHRGDALLVGEFDGITSPSRVPLEVVPIWVRIYDLPLVLMTKARGELYGSKLGRVREI 286
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D V++++ RPL L +++ +G E + ++ YER+P FC G
Sbjct: 287 DVEEDGRNKHDSFRIRVELSVKRPLRSKLAIKINVQGNEVVRRFDLRYERVPHFCLICGF 346
Query: 116 IGHVFREC 123
IGH ++C
Sbjct: 347 IGHSDKDC 354
>gi|222628447|gb|EEE60579.1| hypothetical protein OsJ_13950 [Oryza sativa Japonica Group]
Length = 757
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + ++ PW ++ E G+ S+ +L+ + WI+++ LPL+ MTK +G L+G
Sbjct: 20 DYKFVIQGGPWLHKGDALLVAEFDGLTCPSEVSLDVVTIWIRIYDLPLVLMTKAIGELYG 79
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQ--LEGEENLSTVEVYYERL 106
S G+V EVD V++ + +P + ++ + G E + +V YER+
Sbjct: 80 SKFGKVREVDVEEDGRNRHDFFRIRVELPVKKPPKSKIAIKTTVHGVEAVRRFDVRYERV 139
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH ++C
Sbjct: 140 PFFCFICGYIGHSVKDC 156
>gi|147827385|emb|CAN68617.1| hypothetical protein VITISV_000452 [Vitis vinifera]
Length = 344
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 13/136 (9%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
D RRI + PW+++ + + K +LN + WIQLH LP + +
Sbjct: 97 ADIRRIQESGPWAYDNHPLIFERVAQGDNLDKVDLNELAMWIQLHDLPAGWWSDSIARKI 156
Query: 61 GSMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLP 107
GS +GE E D +K ++ +PL + + ++ E + V + YERLP
Sbjct: 157 GSRLGEFLESDPNNYLGARKDYMWIRIKFDVLKPLKKMINLKKPKGEGMIQVTIRYERLP 216
Query: 108 DFCFQRGRIGHVFREC 123
+CFQ G +GH + C
Sbjct: 217 TYCFQCGMLGHGKKFC 232
>gi|38344623|emb|CAE02522.2| OSJNBb0003A12.9 [Oryza sativa Japonica Group]
Length = 884
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + ++ PW ++ E G+ S+ +L+ + WI+++ LPL+ MTK +G L+G
Sbjct: 182 DYKFVIQGGPWLHKGDALLVAEFDGLTCPSEVSLDVVTIWIRIYDLPLVLMTKAIGELYG 241
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQ--LEGEENLSTVEVYYERL 106
S G+V EVD V++ + +P + ++ + G E + +V YER+
Sbjct: 242 SKFGKVREVDVEEDGRNRHDFFRIRVELPVKKPPKSKIAIKTTVHGVEAVRRFDVRYERV 301
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH ++C
Sbjct: 302 PFFCFICGYIGHSVKDC 318
>gi|45267888|gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1936
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 4 RRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSM 63
RR R W ++ + G+ S L W++++ LPL+ M K G+++GS
Sbjct: 279 RRRSQVRSWLHRGDALLVADFNGLVSPSMVPLETVPIWVRIYDLPLVMMNKERGVIYGSK 338
Query: 64 IGEVEEVDKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPD 108
+G+V EVD V + + RPL R L +++ +G E + + YER+P
Sbjct: 339 LGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLKRMLAIKIKVKGAEEIRRFNLRYERIPH 398
Query: 109 FCFQRGRIGHVFREC 123
FCF G IGH +EC
Sbjct: 399 FCFFCGFIGHSDKEC 413
>gi|222615366|gb|EEE51498.1| hypothetical protein OsJ_32653 [Oryza sativa Japonica Group]
Length = 1322
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + +L PW ++ + G+ S L W++++ LPL+ M K G L+G
Sbjct: 275 DHKFVLQGGPWIHRGDALIVADFNGLLSPSMVPLESVPIWVRIYDLPLVMMNKARGELYG 334
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMR--GLTVQLEGEENLSTVEVYYERL 106
S +G+V E D V + + RPL R + ++++G E + + YER+
Sbjct: 335 SKLGKVREEDVQQDGSNKHDFFRIRVDLPVNRPLKRQIAIKIKIKGVEEIRRFNLRYERV 394
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH +EC
Sbjct: 395 PHFCFFCGFIGHSDKEC 411
>gi|297727877|ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group]
gi|77548275|gb|ABA91072.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
gi|255679693|dbj|BAH95030.1| Os11g0106066 [Oryza sativa Japonica Group]
Length = 1690
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + +L PW ++ + G+ S L W++++ LPL+ M K G L+G
Sbjct: 380 DHKFVLQGGPWIHRGDALIVADFNGLLSPSMVPLESVPIWVRIYDLPLVMMNKARGELYG 439
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMR--GLTVQLEGEENLSTVEVYYERL 106
S +G+V E D V + + RPL R + ++++G E + + YER+
Sbjct: 440 SKLGKVREEDVQQDGSNKHDFFRIRVDLPVNRPLKRQIAIKIKIKGVEEIRRFNLRYERV 499
Query: 107 PDFCFQRGRIGHVFREC 123
P FCF G IGH +EC
Sbjct: 500 PHFCFFCGFIGHSDKEC 516
>gi|218186020|gb|EEC68447.1| hypothetical protein OsI_36657 [Oryza sativa Indica Group]
Length = 332
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 6 ILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIG 65
+L PW ++ + G+ S L F W++++ LPL+ MTK G L+GS +G
Sbjct: 165 VLQGGPWLHRGDALLVAKFDGLTSPSMVPLEFVPIWVRIYDLPLVLMTKRRGELYGSKLG 224
Query: 66 EVEEVDKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFC 110
V EVD G V +++ +PL L +++ +G E + E+ YER+P F
Sbjct: 225 HVREVDVGEDGRNKHDFFRILVDLSVKKPLKTSLAIKINVQGSEAVRRFELRYERVPFFY 284
Query: 111 FQRGRIGHVFREC 123
F G IGH ++C
Sbjct: 285 FICGYIGHSDKDC 297
>gi|222641774|gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japonica Group]
Length = 1139
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ + GI S+ L W++++ LPL+ MT+ G L+GS +G V EV
Sbjct: 127 PWLHRGDALLVAQFDGIISPSQVPLEVVPIWVRIYDLPLVLMTRERGNLYGSKLGHVREV 186
Query: 71 DKG-------------VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGR 115
D V + + RPL + L +++ +G E + ++ YER+P FCF G
Sbjct: 187 DVENDGRNKHDFFRIRVDLPVKRPLRKKLAIKIKEQGSEVVRHFDLRYERVPHFCFICGF 246
Query: 116 IGHVFREC 123
IGH ++C
Sbjct: 247 IGHSDKDC 254
>gi|218202326|gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indica Group]
Length = 1350
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 15/113 (13%)
Query: 26 GIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG------------ 73
GI S+ L W++++ LPL+ MT+ G L+GS +G V EVD
Sbjct: 84 GIISPSQVPLEVVPIWVRIYDLPLVLMTRERGNLYGSKLGHVREVDVENDGRNKHDFFRI 143
Query: 74 -VKINITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
V + + RPL + L +++ +G E + +++YER+P FCF G IGH ++C
Sbjct: 144 RVDLPVKRPLRKKLAIKIKEQGSEVVRHFDLWYERVPHFCFICGFIGHSDKDC 196
>gi|242061200|ref|XP_002451889.1| hypothetical protein SORBIDRAFT_04g009290 [Sorghum bicolor]
gi|242088925|ref|XP_002440295.1| hypothetical protein SORBIDRAFT_09g029280 [Sorghum bicolor]
gi|241931720|gb|EES04865.1| hypothetical protein SORBIDRAFT_04g009290 [Sorghum bicolor]
gi|241945580|gb|EES18725.1| hypothetical protein SORBIDRAFT_09g029280 [Sorghum bicolor]
Length = 416
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R+++ PW F +L E GI SK + + W++++ LP TK +G G
Sbjct: 101 DWRKVMDEGPWIFRGHAVLLEEYDGITKPSKVRFKYLATWVRIYDLPTGFRTKNIGRQLG 160
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
+ IG+ +VD VK+++ +PL R + + L G + V YE+LP
Sbjct: 161 NKIGDFLKVDLDDITSGWRDFLRIRVKLDVEKPLTRIVYISLGGGKR-EAFRVKYEKLPR 219
Query: 109 FCFQRGRIGHVFREC 123
FC G +GHV EC
Sbjct: 220 FCAVCGFLGHVESEC 234
>gi|242073484|ref|XP_002446678.1| hypothetical protein SORBIDRAFT_06g020403 [Sorghum bicolor]
gi|241937861|gb|EES11006.1| hypothetical protein SORBIDRAFT_06g020403 [Sorghum bicolor]
Length = 633
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +++ PW F +L E GI SK N + W++++ LP TK +G G
Sbjct: 87 DWSKVMDEGPWFFRGHAVLLEEYDGITKPSKVQFNHLAMWVRIYDLPTGFRTKNIGRQLG 146
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
IG+ +V+ +K++I++PL R + V L + V YE+LP
Sbjct: 147 DKIGKFLKVELDDDFSGWRDYLRIRIKMDISKPLTRIIYVSLGADGKREAFRVKYEKLPK 206
Query: 109 FCFQRGRIGHVFREC 123
FC G IGH EC
Sbjct: 207 FCAVCGLIGHADTEC 221
>gi|242062454|ref|XP_002452516.1| hypothetical protein SORBIDRAFT_04g027285 [Sorghum bicolor]
gi|241932347|gb|EES05492.1| hypothetical protein SORBIDRAFT_04g027285 [Sorghum bicolor]
Length = 689
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +++ PW F +L E GI SK N + W++++ LP TK +G G
Sbjct: 87 DWSKVMDEGPWFFRGHAVLLEEYDGITKPSKVQFNHLAMWVRIYDLPTGFRTKNIGRQLG 146
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
IG+ +V+ +K++I++PL R + V L + V YE+LP
Sbjct: 147 DKIGKFLKVELDDDFSGWRDYLRIRIKMDISKPLTRIIYVSLGADGKREAFRVKYEKLPK 206
Query: 109 FCFQRGRIGHVFREC 123
FC G IGH EC
Sbjct: 207 FCAVCGLIGHADTEC 221
>gi|242063528|ref|XP_002453053.1| hypothetical protein SORBIDRAFT_04g037480 [Sorghum bicolor]
gi|241932884|gb|EES06029.1| hypothetical protein SORBIDRAFT_04g037480 [Sorghum bicolor]
Length = 416
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R+++ PW F +L E GI SK + + W++++ LP TK +G G
Sbjct: 101 DWRKVMDEGPWIFRGHAVLLEEYDGITKPSKVRFKYLATWVRIYDLPTGFRTKNIGRQLG 160
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
+ IG+ +VD V++++ +PL R + + L G + V YE+LP
Sbjct: 161 NKIGDFLKVDLDAITSGWRDFLRIRVRLDVEKPLTRIVYISLGGGKR-EAFRVKYEKLPR 219
Query: 109 FCFQRGRIGHVFREC 123
FC G +GHV EC
Sbjct: 220 FCAVCGFLGHVESEC 234
>gi|357438555|ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
gi|355478601|gb|AES59804.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
Length = 352
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 30/134 (22%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D IL + PWSF+R L +L +G S+ +L+ FW++++ LPL ++ G
Sbjct: 82 DAENILQSGPWSFDRNLLILDTISGEEQPSELDLHTVQFWVRIYDLPLKLRYDLMAKKIG 141
Query: 62 SMIGEVEEVDK------------GVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDF 109
++G+ EVD V I++ PL RG LP+F
Sbjct: 142 DLVGKFLEVDPRDNNRMGKSIRIKVAIDLRNPLKRGTV------------------LPNF 183
Query: 110 CFQRGRIGHVFREC 123
C++ GRIGH +EC
Sbjct: 184 CYKCGRIGHQMKEC 197
>gi|332322135|emb|CCA66043.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 438
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 14/137 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPL-MSMTKVVGLLF 60
D +++ RPW F+ L +L E G + LN FWI+L LP M VV L
Sbjct: 87 DMSKVMDGRPWCFDNMLVLLKEADGDEQPDQVCLNHSPFWIRLKNLPFNMRSNDVVKALI 146
Query: 61 GSMIGEVEEVDKG-----------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDF 109
G++ GE+ ++++ V +++++PL R ++ + ++L V+ YERLP F
Sbjct: 147 GNL-GEILDIEEDVLGIGRYRRVKVLLDVSKPLRRYRKLRDKSGKDLQ-VDFAYERLPFF 204
Query: 110 CFQRGRIGHVFRECPYL 126
C G +GH ++C ++
Sbjct: 205 CLACGIMGHAEKDCQFV 221
>gi|218190665|gb|EEC73092.1| hypothetical protein OsI_07068 [Oryza sativa Indica Group]
Length = 766
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 31 SKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKIN 77
SK L WI+++ LPL+ MTK G L+GS G+V EVD V +
Sbjct: 192 SKIPLEVVPIWIRIYDLPLVLMTKGRGELYGSKFGQVREVDVEADGRNRHDFFRIRVDLL 251
Query: 78 ITRPLMRGLTV--QLEGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
+ +PL + + +++G E +V YER+P FCF G IGH R+C
Sbjct: 252 VKKPLKPKIAIKNKVQGNEVTRRFDVRYERVPYFCFICGFIGHSDRDC 299
>gi|332322144|emb|CCA66053.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 452
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTK-VVGLLF 60
D ++L RPW F+ L +L E G + +LN FWI+L L L + VV L
Sbjct: 87 DMMKVLDGRPWCFDNTLILLKEAEGDEQPDQVSLNHSPFWIRLKNLSLNHRSNDVVKALI 146
Query: 61 GSMIGEVEEVDKG-----------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDF 109
G+M GE+ ++++ V +++++PL R ++ + L ++ YERLP F
Sbjct: 147 GNM-GEILDIEEDVLGFGRYRRVKVMLDVSKPLRRYRKIRDKRGRELQ-IDFAYERLPFF 204
Query: 110 CFQRGRIGHVFREC 123
C G +GH ++C
Sbjct: 205 CLACGVMGHSEKDC 218
>gi|242075294|ref|XP_002447583.1| hypothetical protein SORBIDRAFT_06g004683 [Sorghum bicolor]
gi|241938766|gb|EES11911.1| hypothetical protein SORBIDRAFT_06g004683 [Sorghum bicolor]
Length = 238
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +RI+ PW F +L E G K N WIQ+HK+P + T+ +
Sbjct: 6 DWKRIMEEDPWIFRGYALMLEEFDGSTTIPKVTPNKVRTWIQIHKIPHLYHTEDIVKQLA 65
Query: 62 SMIGEVEEV-------------DKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
+ +V+E+ VK+ +PL+R +T+ EG+ + ++V YE+LP
Sbjct: 66 VKVVDVQEIVMRVVPSRTEDFHHVRVKLLADKPLIRVVTLAPEGQAKI-LLQVKYEKLPH 124
Query: 109 FCFQRGRIGHVFREC 123
FC + G +GHV EC
Sbjct: 125 FCARCGLMGHVHLEC 139
>gi|77555695|gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 37 FCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDK-------------GVKINITRPLM 83
F W++ KLPL MTK G+ G +GE +D ++I+I +PLM
Sbjct: 20 FVPIWVRAMKLPLGLMTKETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLM 79
Query: 84 RGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
RG+T+ + +E + YE LPDFC+ G +GH + C
Sbjct: 80 RGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTEKLC 119
>gi|62701896|gb|AAX92969.1| Transposable element protein, putative [Oryza sativa Japonica
Group]
gi|62733928|gb|AAX96037.1| Transposable element protein, putative [Oryza sativa Japonica
Group]
gi|77550043|gb|ABA92840.1| hypothetical protein LOC_Os11g18710 [Oryza sativa Japonica Group]
Length = 647
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E G+ SK LN W++++ LPL+ M + G L+GS + V EV
Sbjct: 323 PWIHRGDALLVAEFDGLTCPSKILLNSVPIWVRIYDLPLVLMIQARGKLYGSKLSNVREV 382
Query: 71 DK-------------GVKINITRPLMR--GLTVQLEGEENLSTVEVYYERLPDFCFQRGR 115
D V + + PL + V ++G+E + ++ YER+P FCF G
Sbjct: 383 DVVTDGLNKYDFFRIRVDLPVNHPLKAKIAIKVAVQGKEVTRSFDLRYERVPHFCFICGF 442
Query: 116 IGHVFREC 123
+GH +EC
Sbjct: 443 LGHSDKEC 450
>gi|222615853|gb|EEE51985.1| hypothetical protein OsJ_33665 [Oryza sativa Japonica Group]
Length = 488
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E G+ SK LN W++++ LPL+ M + G L+GS + V EV
Sbjct: 164 PWIHRGDALLVAEFDGLTCPSKILLNSVPIWVRIYDLPLVLMIQARGKLYGSKLSNVREV 223
Query: 71 DK-------------GVKINITRPLMR--GLTVQLEGEENLSTVEVYYERLPDFCFQRGR 115
D V + + PL + V ++G+E + ++ YER+P FCF G
Sbjct: 224 DVVTDGLNKYDFFRIRVDLPVNHPLKAKIAIKVAVQGKEVTRSFDLRYERVPHFCFICGF 283
Query: 116 IGHVFREC 123
+GH +EC
Sbjct: 284 LGHSDKEC 291
>gi|222618679|gb|EEE54811.1| hypothetical protein OsJ_02230 [Oryza sativa Japonica Group]
Length = 1209
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R++ PW ++ G+ S+ + W++++ LP + MT G
Sbjct: 110 DYNRVVYGGPWKHKGDALLVVPYDGLARPSEICIESLPLWLRIYDLPEIMMTTGFARSLG 169
Query: 62 SMIGEVEEVDKGV----KINITRPLMRGLTVQLE---GEENLSTVEVYYERLPDFCFQRG 114
IGEV EV + ++ + PL L L ++ + + V YE +P FCF G
Sbjct: 170 GKIGEVLEVGGAIHDFLRVKVAFPLSSPLKPLLRIWIKDKGVMSFPVKYENVPFFCFSCG 229
Query: 115 RIGHVFRECPYLKSS 129
RIGH RECP + SS
Sbjct: 230 RIGHAERECPEVGSS 244
>gi|357457711|ref|XP_003599136.1| hypothetical protein MTR_3g028330 [Medicago truncatula]
gi|355488184|gb|AES69387.1| hypothetical protein MTR_3g028330 [Medicago truncatula]
Length = 809
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 14/135 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D RIL PW + + +L + D K ++N W Q+H+LP M VG L G
Sbjct: 162 DLARILERSPWLLDNNMIILQKVAVGEDPMKMDMNSTEIWAQIHQLPFGFMDDKVGALVG 221
Query: 62 SMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
+G++ + D VKI + PL + L ++ E +N+ + + YE+L
Sbjct: 222 CHVGKMIKFDDENNYGPWRKFMRIRVKIMVEEPLQQELVIEREEGDNIKLL-LKYEKLGK 280
Query: 109 FCFQRGRIGHVFREC 123
FCF G IGH C
Sbjct: 281 FCFVCGVIGHSENFC 295
>gi|242043564|ref|XP_002459653.1| hypothetical protein SORBIDRAFT_02g008045 [Sorghum bicolor]
gi|241923030|gb|EER96174.1| hypothetical protein SORBIDRAFT_02g008045 [Sorghum bicolor]
Length = 723
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +RI+ PW F +L E G K N WIQ+HK+P + T+ +
Sbjct: 84 DWKRIMEEGPWIFRGYALMLEEFDGSTTIPKVTPNRVRTWIQIHKIPHLYRTEEIVKQLA 143
Query: 62 SMIGEVEEV-------------DKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
+ + +V+EV VK+ + L+R +T+ EG+E + +V YE+LP
Sbjct: 144 AKVRDVQEVVMRAVPSRTGDFHRVRVKLLADKSLIRVVTLAPEGQEKILH-QVKYEKLPR 202
Query: 109 FCFQRGRIGHVFREC 123
FC G +GHV EC
Sbjct: 203 FCAHCGLMGHVHLEC 217
>gi|255562328|ref|XP_002522171.1| conserved hypothetical protein [Ricinus communis]
gi|223538609|gb|EEF40212.1| conserved hypothetical protein [Ricinus communis]
Length = 244
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 12 WSFNRCLFV---LTEPTGIGD--FSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGE 66
WS ++CL V ++E +GD F K N FW+Q+H + + ++ V G+ IG+
Sbjct: 6 WSSDKCLIVFSIISETQHLGDVLFDKVN-----FWVQIHNVSVAYISIDVAKKLGNEIGQ 60
Query: 67 VEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
V ++D G + +R + + +E V + YE L D C+ +GHV+REC
Sbjct: 61 VVDIDGGTTGSSIGRYLRVCVIDMGNKEPKRVVVITYECLLDICYACDMLGHVYREC 117
>gi|332322131|emb|CCA66039.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 488
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 16/135 (11%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPL--MSMTKVVGLL 59
D+ +IL RPW F++ L V+ E G S L FW++++ LP S T+V +
Sbjct: 88 DKAKILDGRPWLFDQKLLVIDEILGDTQPSDVVLETSPFWVRIYNLPFNCRSDTEVRAIA 147
Query: 60 FGSMIGEVEEVD-----------KGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
G +G V EVD V++NI +PL R ++ + + +++++ YERLP
Sbjct: 148 GG--LGPVLEVDIDDFGLERFCRVKVELNIFKPLRRRQRIRRK-DGAVASIDYKYERLPH 204
Query: 109 FCFQRGRIGHVFREC 123
FCF+ G +GH ++C
Sbjct: 205 FCFRCGVLGHGDKDC 219
>gi|255560459|ref|XP_002521244.1| conserved hypothetical protein [Ricinus communis]
gi|223539512|gb|EEF41100.1| conserved hypothetical protein [Ricinus communis]
Length = 219
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D+R +L PW+F+ L VL + G+ ++S + SFWIQLH + L M + + + G
Sbjct: 72 DRRYVLEVGPWNFHNHLIVLVQSKGLENYSIIQFTYASFWIQLHIILLFYMNQKIRMELG 131
Query: 62 SMIGEVEEVD 71
MIG VEE+D
Sbjct: 132 KMIGVVEEID 141
>gi|357495377|ref|XP_003617977.1| hypothetical protein MTR_5g097590 [Medicago truncatula]
gi|355519312|gb|AET00936.1| hypothetical protein MTR_5g097590 [Medicago truncatula]
Length = 758
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D RIL PW + + +L + D L+ W+Q+H+LP M + VG L G
Sbjct: 212 DLTRILDRSPWLIDNNMLILKKVAIGEDPLMVALDTTEIWVQIHQLPFGFMDEKVGALVG 271
Query: 62 SMIGEV----EEVDKG---------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
S IG++ EE + G V+I++ PL + L ++ E +N+ V +E+L
Sbjct: 272 SHIGKMIRFDEENNYGPWRKFMRVRVEISMDTPLQQELVIEREKGDNIKLV-FKFEKLGK 330
Query: 109 FCFQRGRIGHVFRECP-YLKSSPTN 132
FCF G IGH C +SS T+
Sbjct: 331 FCFVCGVIGHSENFCSDKFESSSTD 355
>gi|332322127|emb|CCA66035.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 465
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPL-----MSMTKVV 56
D+ R++ +PW F++ + ++++ G S L W +++ LP ++ K +
Sbjct: 112 DKHRVMEGQPWHFDKHVILMSDIKGNCKPSDIQLWEFPIWARVYDLPFKGRLNINNVKAI 171
Query: 57 GLLFGSMIGEVEE----VDKGVKI----NITRPLMRGLTVQLE-GEENLSTVEVYYERLP 107
G GS I + +DK ++I ++ +PL + V+++ GEE++ TV+ YER P
Sbjct: 172 GNKIGSFITMDKSGAMGIDKSIRIRVMHDVRKPLSSSIKVRMKSGEEDIFTVK--YERPP 229
Query: 108 DFCFQRGRIGHVFREC 123
FCF G++GH ++C
Sbjct: 230 LFCFYCGKVGHGTKDC 245
>gi|242036239|ref|XP_002465514.1| hypothetical protein SORBIDRAFT_01g040330 [Sorghum bicolor]
gi|241919368|gb|EER92512.1| hypothetical protein SORBIDRAFT_01g040330 [Sorghum bicolor]
Length = 353
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +RI+ PW F +L E G + WIQ+HKLP + + +
Sbjct: 50 DWKRIMDEGPWLFRGYALMLEEFDGSTTVPSVIPDRVMAWIQIHKLPHLYRNEAILNQLA 109
Query: 62 SMIGEVEEVD-------------KGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
+ +GEV+EV+ V + R L+R +T+ EG+E + ++V YE+LP
Sbjct: 110 AKVGEVQEVETRAINTKSGDFHRARVFLPAKRALVRVVTLAPEGKEKI-YLQVKYEKLPR 168
Query: 109 FCFQRGRIGHVFREC 123
FC G +GH EC
Sbjct: 169 FCGHCGFMGHTLLEC 183
>gi|218188462|gb|EEC70889.1| hypothetical protein OsI_02427 [Oryza sativa Indica Group]
Length = 1477
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 41 WIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKGV----KINITRPLMRGLTVQLE---GE 93
W++++ LP + MT G IGEV EV + ++ + PL L L +
Sbjct: 123 WLRIYDLPEIMMTTGFARSLGGKIGEVLEVGGAIHDFLRVKVAFPLSSPLKPLLRIWIKD 182
Query: 94 ENLSTVEVYYERLPDFCFQRGRIGHVFRECPYLKSS 129
+ + + V YE +P FCF GRIGH RECP + SS
Sbjct: 183 KGVMSFPVKYENVPFFCFSCGRIGHAERECPEVGSS 218
>gi|242081049|ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [Sorghum bicolor]
gi|241941643|gb|EES14788.1| hypothetical protein SORBIDRAFT_07g007880 [Sorghum bicolor]
Length = 388
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
+D RIL PW R +L + S+ + W+++ LPL M G
Sbjct: 112 MDMERILAGSPWMVGRHAVILKQYDERLSASEIVFDRMEIWVRILNLPLGWMNLQRGNRA 171
Query: 61 GSMIGEV--EEVDKGVK-----------INITRPLMRGLTVQLEGEENLSTVEVYYERLP 107
+IG V +VD+ K I I +PL RG+ +++ E V YERLP
Sbjct: 172 MGLIGNVIKMDVDRDGKASGAFLRARLAIEIDKPLRRGVLLRMSRSEEPKWFAVQYERLP 231
Query: 108 DFCFQRGRIGHVFRECP 124
FCF G +GH ECP
Sbjct: 232 FFCFACGIMGHSEIECP 248
>gi|255559276|ref|XP_002520658.1| conserved hypothetical protein [Ricinus communis]
gi|223540043|gb|EEF41620.1| conserved hypothetical protein [Ricinus communis]
Length = 250
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
VD +R+ PW+FN +L + + L + FWIQ+++LP+ ++ V
Sbjct: 92 VDVKRVENGGPWTFNNYHILLHRLKEKENPHEVELKWTDFWIQVYRLPIGFRSEKVVKNI 151
Query: 61 GSMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLP 107
G+ +GE E D V+++ T+PL+ + ++ G E+ S ++ YERL
Sbjct: 152 GNYVGEYLESDLNNFDGTWREYIRLRVRVDSTKPLLANMKIKKVGGES-SAIDFKYERLG 210
Query: 108 DFCFQRGRIGHVFREC 123
FCF G GH + C
Sbjct: 211 IFCFICGYRGHSDKFC 226
>gi|357440917|ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago truncatula]
gi|355479784|gb|AES60987.1| hypothetical protein MTR_1g073220 [Medicago truncatula]
Length = 361
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNF--CSFWIQLHKLPLMSMTKVVGLL 59
D +RI+ PW F R +++ P D ++L F W+QL LP TK +G+
Sbjct: 134 DTKRIIRGNPWFF-RNSWLIVHPWR-RDIDARSLEFRHAPIWVQLRGLPTQCRTKQMGIK 191
Query: 60 FGSMIGEV------EEVDKG----VKIN--ITRPLMRGLTVQLEGEENLSTVEVYYERLP 107
GS IG V E DK +K+N ++ P+ G+ + ++ ++ YE LP
Sbjct: 192 IGSSIGTVLASELYEYPDKKLIIKIKVNLAVSTPIKAGIYIG-SAKDGAHWIDFRYENLP 250
Query: 108 DFCFQRGRIGHVFREC 123
FCF G IGH C
Sbjct: 251 QFCFACGLIGHTEANC 266
>gi|147823314|emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
Length = 652
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 28/148 (18%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTE------PTGIGDFSKQNLNFCSFWIQLHKLPLMSMTK 54
VD +R+L PW+F+ L +L PT I F FWIQ++ +P+ SM+
Sbjct: 33 VDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFH------VLFWIQVYDIPVGSMSL 86
Query: 55 VVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLTVQL-EGEENLSTVE 100
VG G+ IG+ + D V +++ +PL R ++ +GE +L V
Sbjct: 87 NVGKQLGNFIGKFVDYDINNNAGLWRNFMRIRVLLDVRQPLKRWKKIRKPQGEWSL--VH 144
Query: 101 VYYERLPDFCFQRGRIGHVFRECPYLKS 128
YERL FC+ G +GH + C L S
Sbjct: 145 FKYERLSTFCYLCGMLGHSEKFCDKLFS 172
>gi|357487395|ref|XP_003613985.1| hypothetical protein MTR_5g043410 [Medicago truncatula]
gi|355515320|gb|AES96943.1| hypothetical protein MTR_5g043410 [Medicago truncatula]
Length = 180
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 34 NLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKGVKINITRPLMRGLTVQLEGE 93
+LN FWIQ+H LP + VG GS +G ++ D I++T PL + V+
Sbjct: 14 SLNHIEFWIQVHGLPFGFIQPKVGQGIGSFLGTLKSYD---AIDVTVPLKKEWRVRASTG 70
Query: 94 ENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
E + TV YE+L FC + G +GH + CP L
Sbjct: 71 ECV-TVSFQYEKLGVFCHRCGLLGHTDKVCPDL 102
>gi|242081869|ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [Sorghum bicolor]
gi|241942053|gb|EES15198.1| hypothetical protein SORBIDRAFT_07g024435 [Sorghum bicolor]
Length = 785
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D+ R+L PW + +L E + + W+++ LPL M + G
Sbjct: 106 DKERVLGGSPWMVGKYSVLLQEYDEKLCAADIKFDRLDLWVRILNLPLGWMNRSRGSRAM 165
Query: 62 SMIGEVEEVD-------------KGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
+IG+V E+D V + I +P+ RG+ +++ + + YE+LP
Sbjct: 166 GLIGQVVEMDVDADGKASGAFLRARVSMEIDKPVRRGILLRVNKTDEPRWFQAQYEKLPY 225
Query: 109 FCFQRGRIGHVFRECP 124
CF G IGH ECP
Sbjct: 226 MCFACGIIGHSDMECP 241
>gi|242091389|ref|XP_002441527.1| hypothetical protein SORBIDRAFT_09g028670 [Sorghum bicolor]
gi|241946812|gb|EES19957.1| hypothetical protein SORBIDRAFT_09g028670 [Sorghum bicolor]
Length = 364
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R+++ PW F + +L + G+ S + W +++ LP + +G G
Sbjct: 96 DWRKVMEEGPWLFRGNVVLLEKYDGVTKPSTVKFKKLAIWARVYDLPTCFRNEKIGHQLG 155
Query: 62 SMIGEV--EEVDKGVK-----------INITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
IG+ E D VK ++I +PL R + V EE V YE+LP
Sbjct: 156 DKIGDTLWVEPDNDVKGWRDYLRIRVNMDIDKPLTRIIFVSFGKEEKREVFRVKYEKLPK 215
Query: 109 FCFQRGRIGHVFREC 123
FC G IGH EC
Sbjct: 216 FCAICGLIGHTKFEC 230
>gi|253761862|ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 [Sorghum bicolor]
gi|241946953|gb|EES20098.1| hypothetical protein SORBIDRAFT_0010s007680 [Sorghum bicolor]
Length = 531
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 13/135 (9%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R+L PW R +L + S+ + W+++ LPL M + G
Sbjct: 106 DLERVLAGTPWIVGRHAVILKDYNEKLSASEIVFDRMEIWVRIPNLPLGWMNQTRGSRAM 165
Query: 62 SMIGEVEEVD-------------KGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
S+IG V +D V I I +PL RG+ +++ E YE+LP
Sbjct: 166 SLIGPVVRMDVDDDGKASGAFLRARVAIEIDKPLRRGVLLRMSKAEEPRWFHAQYEKLPY 225
Query: 109 FCFQRGRIGHVFREC 123
+CF G +GH EC
Sbjct: 226 YCFGCGIMGHSEVEC 240
>gi|242089889|ref|XP_002440777.1| hypothetical protein SORBIDRAFT_09g006416 [Sorghum bicolor]
gi|241946062|gb|EES19207.1| hypothetical protein SORBIDRAFT_09g006416 [Sorghum bicolor]
Length = 125
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 13/101 (12%)
Query: 42 IQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLTV 88
+++ LP M K G G IG +EVD G V I+I RPLMRG+TV
Sbjct: 1 VRVSNLPFGMMDKETGETLGEKIGVFKEVDIGLDAIAVGRVLRIKVLIDIRRPLMRGITV 60
Query: 89 QLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYLKSS 129
++ E YE LPD C G +GH ++C + S
Sbjct: 61 KVGNPEREKWCSFAYEFLPDSCHTCGLVGHTDKQCSLPRES 101
>gi|255584690|ref|XP_002533066.1| conserved hypothetical protein [Ricinus communis]
gi|223527130|gb|EEF29305.1| conserved hypothetical protein [Ricinus communis]
Length = 403
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
VD +RI PW+FN +L + K L + +F IQ++ LP+ + V
Sbjct: 98 VDVKRIENGGPWTFNNYHILLHRLKEKENPHKVELKWTNFLIQVYHLPIGFWREKVAKSI 157
Query: 61 GSMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLP 107
G+ +GE E D V+++ +PL+ + ++ G E S ++ YERL
Sbjct: 158 GNYVGEYLESDLNNFHGTWREYIRLRVRVDSAKPLLANMKIKKVGGE-WSAIDFKYERLS 216
Query: 108 DFCFQRGRIGHVFRECPYLKSSP 130
F F G IGH+ R C + +P
Sbjct: 217 IFYFICGHIGHLDRFCRKVLENP 239
>gi|357436959|ref|XP_003588755.1| hypothetical protein MTR_1g012400 [Medicago truncatula]
gi|355477803|gb|AES59006.1| hypothetical protein MTR_1g012400 [Medicago truncatula]
Length = 328
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 7 LCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGE 66
+ PW + + +L + D + + W+Q+H+LP M K VG L GS +G
Sbjct: 58 MDASPWLVDNNMVILKKVNVGEDPASIPMTKTEIWVQIHQLPFGFMEKSVGALVGSHVGR 117
Query: 67 VEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFR 121
+ I++ PL + L ++ EG + + V V YE+L CF G +GH +
Sbjct: 118 M--------IDMEEPLQQELVIEKEGGDPIRLV-VKYEKLGKLCFICGVLGHTDK 163
>gi|222630990|gb|EEE63122.1| hypothetical protein OsJ_17930 [Oryza sativa Japonica Group]
Length = 399
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 31 SKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKIN 77
SK L WI+++ LPL M K G L+GS G V +VD V +
Sbjct: 139 SKVPLEVVPIWIRIYDLPLALMIKARGQLYGSRFGHVRKVDVEEDGRNRHDFFRIRVDLP 198
Query: 78 ITRPLMRGLTVQL--EGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
+ +PL L +++ +G E + +V Y+ +P FCF G IGH ++C
Sbjct: 199 VKKPLKSKLAIKINAQGTEVVIRFDVRYKWIPYFCFCCGFIGHSDKDC 246
>gi|242096280|ref|XP_002438630.1| hypothetical protein SORBIDRAFT_10g023155 [Sorghum bicolor]
gi|241916853|gb|EER89997.1| hypothetical protein SORBIDRAFT_10g023155 [Sorghum bicolor]
Length = 561
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 13/135 (9%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R+L PW R +L + S+ + W+++ LPL M + G
Sbjct: 106 DLERVLAGTPWMVGRHAVILKDYDEKLSASEIVFDRMEIWVRILNLPLGWMNQTRGSRAM 165
Query: 62 SMIGEVEEVD-------------KGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
S+IG + +D V I I +PL RG+ +++ E YE+LP
Sbjct: 166 SLIGPMVRMDVDADGKASGAFLRARVAIEIDKPLRRGVLLRMSKTEEPRWFHAQYEKLPY 225
Query: 109 FCFQRGRIGHVFREC 123
+CF G +GH EC
Sbjct: 226 YCFGCGIMGHSEVEC 240
>gi|218195460|gb|EEC77887.1| hypothetical protein OsI_17181 [Oryza sativa Indica Group]
Length = 1026
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R++ PW+F C +L E G NL WIQ+H L T +
Sbjct: 112 DWERVMNEGPWTFRGCSVLLAEYDGWSKIESVNLYTYPAWIQIHDLKEKIRTGSIATQLP 171
Query: 62 SMIGEVEEVDKG------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDF 109
G + ++D V +++ +PL R ++ L ++ + V YE++P F
Sbjct: 172 CRAGSIVKLDAALVRGSSEGARVRVMLDVRKPLTRVVSTTLNKKKWM--FRVMYEKMPIF 229
Query: 110 CFQRGRIGHVFRE 122
C G +GHV +E
Sbjct: 230 CGVCGFVGHVTKE 242
>gi|255563433|ref|XP_002522719.1| conserved hypothetical protein [Ricinus communis]
gi|223538069|gb|EEF39681.1| conserved hypothetical protein [Ricinus communis]
Length = 82
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRE 122
V IN+ RPL GL + + EE T+ + YERLPDFC+ G +GH +RE
Sbjct: 20 VLINMLRPLKYGLLLDIGNEEPKKTIVISYERLPDFCYACGMLGHTYRE 68
>gi|224097606|ref|XP_002311007.1| predicted protein [Populus trichocarpa]
gi|222850827|gb|EEE88374.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQ-NLNFCSFWIQLHKLPLMSMTKVVGLL 59
VD +R+L PW+F+ L +L GD +Q +N FW+Q+++L + M+ V+G
Sbjct: 72 VDMKRVLEGAPWAFDNHLLLLHRLVE-GDVPRQIPVNHVDFWVQIYELQVGYMSLVIGKQ 130
Query: 60 FGSMIGEVEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHV 119
G IG + D R MR + V ++G L + F+ R+GH
Sbjct: 131 LGDFIGTFVDYDTINNNGARRSYMR-IRVTIDGHHPLKKIRKGEGSSYMVQFKYERLGHA 189
Query: 120 FRECPYL 126
R C +L
Sbjct: 190 DRFCKHL 196
>gi|242095218|ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
gi|241916322|gb|EER89466.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
Length = 649
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 13/136 (9%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D+ R+L PW + +L E + + W+++ LPL M + G
Sbjct: 106 DKERVLGGSPWMVGKYSVLLQEYDEKLCAADIKFDRLDLWVRILNLPLGWMNRSRGSRAM 165
Query: 62 SMIGEVEEVD-------------KGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
+IG+V E+D V + I +P+ RG+ +++ + + YE+LP
Sbjct: 166 GLIGQVVEMDVDADGKASGAFLRARVSMEIDKPVRRGILLRVNKTDEPRWFQAQYEKLPY 225
Query: 109 FCFQRGRIGHVFRECP 124
C G IGH ECP
Sbjct: 226 ICLACGIIGHSDMECP 241
>gi|242036841|ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
gi|241919669|gb|EER92813.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
Length = 1028
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R+L PW + VL S+ + W+++ LPL M + G
Sbjct: 112 DLERVLSGTPWMVGKHAIVLKLYDEKLSASEIVFDRMDIWVRILNLPLGWMNQQRGARVM 171
Query: 62 SMIGEVEEVD------------KG-VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPD 108
S+IG V ++D +G V I I +PL RG+ +++ E E YE+LP
Sbjct: 172 SLIGSVVKLDVDSDGKASGAFLRGRVSIEIDKPLRRGVLLRMSKSEEPKWFEAQYEKLPY 231
Query: 109 FCFQRGRIGH 118
+C G +GH
Sbjct: 232 YCSSCGMLGH 241
>gi|3047061|gb|AAC13575.1| similar to Arabidopsis thaliana retrotransposon Ta11-1 (GB:(L47193)
[Arabidopsis thaliana]
Length = 416
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 6 ILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIG 65
+L PWSFN ++L+ + S+ L FW+Q+ +PL+ +T + G+ +G
Sbjct: 112 VLRRGPWSFND--WMLSIHRWYPNISETELKIIPFWVQITGIPLLFLTNAMARCVGNRLG 169
Query: 66 EVEEVDKG----------VKI--NITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQR 113
V VD VKI N+ PL Q +EN + ++ +ERL +FC +
Sbjct: 170 IVSTVDFDENSNHVGFVRVKIDWNLDDPLRFQRNFQFAVDEN-TVIKYRFERLRNFCSKC 228
Query: 114 GRIGHVFREC 123
G + H +EC
Sbjct: 229 GSLKHDVKEC 238
>gi|4432866|gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PWSFN ++L+ + S+ + FW+Q+ +PL+ +T + G+ +G V +V
Sbjct: 96 PWSFND--WMLSIHRWYPNLSEAEMKIIPFWVQITGIPLLFLTNAMARCVGNRLGHVADV 153
Query: 71 DKG------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGH 118
D + N+ PL Q EN + ++ +ERL +FC + G + H
Sbjct: 154 DFDENSNHTGFVRVRINWNLDDPLRFQRNFQFADGEN-TVIKFRFERLRNFCTKCGSLKH 212
Query: 119 VFREC 123
+ C
Sbjct: 213 DIKVC 217
>gi|242040697|ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [Sorghum bicolor]
gi|241921597|gb|EER94741.1| hypothetical protein SORBIDRAFT_01g033270 [Sorghum bicolor]
Length = 542
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 61 GSMIGEVEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVF 120
GS +G + VKI+I +PLMRG+ ++ E+ + YE LP+FC+ G +GHV
Sbjct: 19 GSAVGGFLRIK--VKIDIRKPLMRGILLERAEGEDDCWCPIRYEYLPNFCYGCGLLGHVE 76
Query: 121 REC 123
+EC
Sbjct: 77 KEC 79
>gi|12323542|gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 100033-105622 [Arabidopsis
thaliana]
Length = 1557
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 35 LNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV---------DKGVKI----NITRP 81
L F W+Q+ +P+ T+ G +IGEV+EV K V++ +++RP
Sbjct: 118 LRFMPLWVQIWNIPVNYYTEKAITKLGDLIGEVKEVVFNPDLHQAQKFVRVKVLFDVSRP 177
Query: 82 LMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
L R + + E+ +TV+ +YER+ C++ R+ H CP L
Sbjct: 178 LRRSKVINFKHGES-ATVKFHYERIQKRCYECQRLTHEKDMCPLL 221
>gi|222629449|gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMT------------KVVGL 58
PW+F C +L E G NL WIQ+H L T +V L
Sbjct: 5 PWTFRGCPVLLAEYDGWSKIESVNLYTYPAWIQIHDLKEKIRTGSIATQLARRARSIVKL 64
Query: 59 LFGSMIGEVEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGH 118
S+ G E V +++ +PL R ++ L ++ + V YE++P FC G +GH
Sbjct: 65 DAASVRGSSEGARVRVMLDVRKPLTRVVSTTLNKKKWM--FRVMYEKMPIFCGVCGFVGH 122
Query: 119 VFRE 122
V +E
Sbjct: 123 VTKE 126
>gi|253760430|ref|XP_002488984.1| hypothetical protein SORBIDRAFT_0801s002010 [Sorghum bicolor]
gi|241947403|gb|EES20548.1| hypothetical protein SORBIDRAFT_0801s002010 [Sorghum bicolor]
Length = 138
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW F + L V+ + G N WI++ + L M + + G+ +G ++
Sbjct: 7 PWVFGKDLIVMVDFDGRKQLEDVNFEIIPLWIRVLGMSLRMMNWLTREMIGNKVGVFVDM 66
Query: 71 DK-------------GVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQR-GRI 116
D VK+NI +PLMRG+++ + E+N + YE L FC+ I
Sbjct: 67 DLEEDGSAVRKYIRINVKLNINKPLMRGISLVAKEEDNPLWFPIVYEFLLKFCYNNCNII 126
Query: 117 GH 118
GH
Sbjct: 127 GH 128
>gi|3513745|gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 6 ILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIG 65
+L PWSFN ++L+ + ++ + FW+Q+ +P++ +T + + GS +G
Sbjct: 91 VLQRGPWSFND--WMLSVHRWFPNITEGEMKIIPFWVQIQGIPILYLTNAMARVVGSRLG 148
Query: 66 EVEEVDKG--------VKINITRPLMRGLTVQ--LEGEENLST-VEVYYERLPDFCFQRG 114
V +VD V++ + L Q + +EN +T ++ +ERL +FC + G
Sbjct: 149 YVTDVDFDENANQMGFVRVKLAWNFDDHLRFQRNFQFQENENTIIKFRFERLRNFCTKCG 208
Query: 115 RIGHVFREC 123
+ H +EC
Sbjct: 209 SLKHDVKEC 217
>gi|4539357|emb|CAB40051.1| putative protein [Arabidopsis thaliana]
gi|7267781|emb|CAB81184.1| putative protein [Arabidopsis thaliana]
Length = 1294
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 6 ILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIG 65
+L PWSFN ++L+ + ++ + FW+Q+ +P++ +T + + GS +G
Sbjct: 91 VLQRGPWSFND--WMLSVHRWFPNITEGEMKIIPFWVQIQGIPILYLTNAMARVVGSRLG 148
Query: 66 EVEEVDKG--------VKINITRPLMRGLTVQ--LEGEENLST-VEVYYERLPDFCFQRG 114
V +VD V++ + L Q + +EN +T ++ +ERL +FC + G
Sbjct: 149 YVTDVDFDENANQMGFVRVKLAWNFDDHLRFQRNFQFQENENTIIKFRFERLRNFCTKCG 208
Query: 115 RIGHVFREC 123
+ H +EC
Sbjct: 209 SLKHDVKEC 217
>gi|359495673|ref|XP_003635054.1| PREDICTED: cysteine desulfurase 1, mitochondrial [Vitis vinifera]
Length = 865
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 26/142 (18%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTE------PTGIGDFSKQNLNFCSFWIQLHKLPLMSMTK 54
VD +R+L PW+F+ L +L PT I F FWIQ++ + + SM+
Sbjct: 540 VDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFH------VLFWIQVYDILVGSMSL 593
Query: 55 VVGLLFGSMIGEVEEVDKGVKINITRPLMRGLTVQLEGEENL-------------STVEV 101
VG + IG+ + + + R MR + V L+ + L S V
Sbjct: 594 NVGKQLDNFIGKFVDYNINNNAGLWRNFMR-IRVLLDVRQPLKMWKRIRKPQGEWSLVHF 652
Query: 102 YYERLPDFCFQRGRIGHVFREC 123
YERL FC+ G +GH + C
Sbjct: 653 KYERLSTFCYLCGMLGHSEKFC 674
>gi|110289448|gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E G+ S+ L W++++ LPL+ MTK G+L+GS +G V EV
Sbjct: 227 PWLHRGDALLVAEFDGLTSPSQVPLEVVPIWVRIYDLPLVLMTKDRGILYGSKLGHVREV 286
Query: 71 DKGV---------KINITRPLMRGLTVQLEGEENLSTVEVYYER 105
D +I + P+ R L + + N+ E +ER
Sbjct: 287 DVEADGRNKHDFFRIRVDLPVNRALKTHIAIKINVQGNEEAFER 330
>gi|242061110|ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [Sorghum bicolor]
gi|241931675|gb|EES04820.1| hypothetical protein SORBIDRAFT_04g008547 [Sorghum bicolor]
Length = 599
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 33/132 (25%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
+D RIL PW +L P G W+ L + + +GL+
Sbjct: 81 MDMERILAGSPW------MILNLPLG--------------WMNLQR-----GNRAMGLIG 115
Query: 61 GSMIGEVEEVDKG--------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQ 112
+ +V+ K + I I +PL RG+ +++ E V YERLP FCF
Sbjct: 116 NVIKMDVDRDGKASGAFLRARLAIEIDKPLRRGVLLRMSRSEEPKWFAVQYERLPFFCFA 175
Query: 113 RGRIGHVFRECP 124
G +GH ECP
Sbjct: 176 CGIMGHSEIECP 187
>gi|27311287|gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1557
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV 70
PW ++ E G+ S+ L W++++ LPL+ MTK G+L+GS +G V EV
Sbjct: 227 PWLHRGDALLVAEFDGLTSPSQVPLEVVPIWVRIYDLPLVLMTKDRGILYGSKLGHVREV 286
Query: 71 DKGV---------KINITRPLMRGLTVQLEGEENLSTVEVYYER 105
D +I + P+ R L + + N+ E +ER
Sbjct: 287 DVEADGRNKHDFFRIRVDLPVNRALKTHIAIKINVQGNEEAFER 330
>gi|147805050|emb|CAN71439.1| hypothetical protein VITISV_011331 [Vitis vinifera]
Length = 626
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTE------PTGIGDFSKQNLNFCSFWIQLHKLPLMSMTK 54
VD +R+L PW+F+ L +L PT I F FWIQ++ + + SM+
Sbjct: 83 VDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPLFH------VLFWIQVYDILVGSMSL 136
Query: 55 VVGLLFGSMIGEVEEVDKGVKINITRPLMRGLTVQLEGEENL-------------STVEV 101
VG + IG+ + + + R MR + V L+ + L S V
Sbjct: 137 NVGKQLDNFIGKFVDYNINNNAGLWRNFMR-IRVLLDXRQPLKMWKRIRKPQGEWSLVHF 195
Query: 102 YYERLPDFCFQRGRIGHVFRECPYL 126
YERL FC+ G +GH + C L
Sbjct: 196 KYERLSTFCYLCGMLGHSEKFCDKL 220
>gi|388516879|gb|AFK46501.1| unknown [Lotus japonicus]
Length = 122
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
D+ ++L PW+F++ L +L + + + N+N SFW++ +++P+ S T V
Sbjct: 36 ADKGKVLKASPWNFDKHLVILKDMDVKANPREINMNATSFWVRAYEVPVGSRTAQVAKSL 95
Query: 61 GSMIGEVEEVDKG 73
G +IG E D+
Sbjct: 96 GDLIGNFIEWDEA 108
>gi|9279796|dbj|BAB01217.1| Ta11 non-LTR retroelement protein-like [Arabidopsis thaliana]
gi|67633664|gb|AAY78756.1| putative zinc finger protein [Arabidopsis thaliana]
Length = 487
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 35 LNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV---------DKGVKIN----ITRP 81
L F W+Q+ +P+ T+ G +IGEV+EV + V++N ++RP
Sbjct: 118 LRFMLVWVQIWNIPVNYYTEKAITKLGDLIGEVKEVVFNPVEPQLHEFVRVNVLFDVSRP 177
Query: 82 LMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
L R + + + +TV +YER+ C++ R+ H CP L
Sbjct: 178 LRRSKVINFKNGDT-ATVRFHYERIQKRCYECQRLTHEKDLCPIL 221
>gi|357451867|ref|XP_003596210.1| hypothetical protein MTR_2g071600 [Medicago truncatula]
gi|355485258|gb|AES66461.1| hypothetical protein MTR_2g071600 [Medicago truncatula]
Length = 371
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 5 RILCTRPWSFNRCLFVL------TEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGL 58
+IL PW C ++ P + DFSK L W+QL LPL + ++G
Sbjct: 171 KILKGNPWIICNCWLIIHAWDRKVNPKEL-DFSKVPL-----WVQLWGLPLHCKSIMIGE 224
Query: 59 LFGSMIGEVEEVD--------KGVKI----NITRPLMRGLTVQLEGEENLSTVEVYYERL 106
GS IG+V + K VK+ +++ P+ GL + + E+ ++ V+ YE L
Sbjct: 225 QIGSQIGQVLDTSLYEYPDNAKIVKVKFLHDLSSPIKVGLYIGND-EDGINLVDFRYETL 283
Query: 107 PDFCFQRGRIGHVFRECPYLKS 128
P FCF+ G + H C + S
Sbjct: 284 PMFCFRCGLVYHNEDICSSVPS 305
>gi|222616958|gb|EEE53090.1| hypothetical protein OsJ_35851 [Oryza sativa Japonica Group]
Length = 502
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 47 LPLMSMTKVVGLLFGSMIGE---VEEVDKG----------VKINITRPLMRGLTVQL-EG 92
+P M KV G + +GE +E + G ++++I +PLMRG+T+ + EG
Sbjct: 1 MPFGMMNKVTGKAITNEVGEFIQMEAEEDGTAVGQFLHIKIRLDIRKPLMRGVTLCVGEG 60
Query: 93 EENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
++ + + YE LPDFC+ G IGH + C
Sbjct: 61 KKEI-WCPLVYEFLPDFCYTCGIIGHTDKVC 90
>gi|77554767|gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 839
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 47 LPLMSMTKVVGLLFGSMIGE---VEEVDKG----------VKINITRPLMRGLTVQL-EG 92
+P M KV G + +GE +E + G ++++I +PLMRG+T+ + EG
Sbjct: 1 MPFGMMNKVTGKAITNEVGEFIQMEAEEDGTAVGQFLHIKIRLDIRKPLMRGVTLCVGEG 60
Query: 93 EENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
++ + + YE LPDFC+ G IGH + C
Sbjct: 61 KKEI-WCPLVYEFLPDFCYTCGIIGHTDKVC 90
>gi|242076064|ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [Sorghum bicolor]
gi|241939151|gb|EES12296.1| hypothetical protein SORBIDRAFT_06g019043 [Sorghum bicolor]
Length = 678
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 5 RILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMI 64
R+ PW R +L S+ + W++L LPL M + G ++
Sbjct: 3 RVFGGSPWMVGRHALLLQTYDENLKPSEIRFDRMDIWVRLLNLPLGWMNRHRGERAMGLV 62
Query: 65 GEVEEVD-------------KGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCF 111
G V+++D V + + +PL RG+ ++ + + ++ YE+LP FC
Sbjct: 63 GVVKKMDVDKDGKASGAYLRARVAVEVAKPLRRGVLLRTKKDVEPEWFDLQYEKLPFFCL 122
Query: 112 QRGRIGHVFREC 123
G +GH EC
Sbjct: 123 SCGIMGHSELEC 134
>gi|255553363|ref|XP_002517723.1| conserved hypothetical protein [Ricinus communis]
gi|223543121|gb|EEF44655.1| conserved hypothetical protein [Ricinus communis]
Length = 127
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 35 LNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKGVKINITRPLMRGLTVQLEGEE 94
N FWIQ H LP + + + G + E+ +INI RP G ++
Sbjct: 21 FNQSPFWIQAHGLPPNQVNEKNAHMIGDLFEEM------TQINI-RP---GGGARM-ANG 69
Query: 95 NLSTVEVYYERLPDFCFQRGRIGHVFREC 123
++ + YERLPDFCF+ G IGH C
Sbjct: 70 DMQWISFKYERLPDFCFKCGIIGHTNHSC 98
>gi|255584232|ref|XP_002532854.1| hypothetical protein RCOM_1166040 [Ricinus communis]
gi|223527391|gb|EEF29532.1| hypothetical protein RCOM_1166040 [Ricinus communis]
Length = 348
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
VD +R+ PW+FN +L D ++N+ FWIQ +++P+ ++ V
Sbjct: 45 VDVKRVEDGGPWTFNNYHILLHRLVEHEDPQDVDINWVDFWIQAYRVPIGFRSEKVARNI 104
Query: 61 GSMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLP 107
G+ I + + VK++ T+P++ + ++ G +E YERL
Sbjct: 105 GNYIEKYVDSHPNNFDDSWRDYMRIRVKVDATKPIISSMNIKKVGGVWFK-IEFKYERLV 163
Query: 108 DFCFQRGRIGH 118
F F G IGH
Sbjct: 164 IFYFICGLIGH 174
>gi|242064842|ref|XP_002453710.1| hypothetical protein SORBIDRAFT_04g011080 [Sorghum bicolor]
gi|241933541|gb|EES06686.1| hypothetical protein SORBIDRAFT_04g011080 [Sorghum bicolor]
Length = 369
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
VKI+I +PL RG+ V+ E E + YE +P+FC+ G +GHV +EC
Sbjct: 122 VKIDIRKPLRRGILVEGEDGEEDCWCPIKYEFIPNFCYSCGCLGHVEKEC 171
>gi|110738286|dbj|BAF01072.1| hypothetical protein [Arabidopsis thaliana]
Length = 224
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 11 PWSFNRCLFVLTE--PTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVE 68
PW+FN + +L PT ++ +NF FWIQ+ +P +T+ V G +G +
Sbjct: 57 PWAFNDRMLILQRWFPT-----NQPLINFIPFWIQIRGIPYHYLTREVIAHVGRALGNLM 111
Query: 69 EVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGR 115
EVD G V NI PL Q E N + + +ERL FC G
Sbjct: 112 EVDFGLETAARVDYVRVQVNWNIEDPLRFQRNFQFEANVN-TLLRFRFERLRGFCEVCGM 170
Query: 116 IGHVFREC 123
+ H C
Sbjct: 171 LTHDSGAC 178
>gi|222616232|gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
Length = 1102
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +L PW ++ + G+ S L F W++++ LPL+ MTK G L+G
Sbjct: 161 DYNFVLQGGPWLHRGDALLVAKFDGLTSPSMVPLEFVPIWVRIYDLPLVLMTKRRGELYG 220
Query: 62 SMIGEVEEVDKG 73
S +G V EVD G
Sbjct: 221 SKLGHVREVDVG 232
>gi|108864566|gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1469
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +L PW ++ + G+ S L F W++++ LPL+ MTK G L+G
Sbjct: 161 DYNFVLQGGPWLHRGDALLVAKFDGLTSPSMVPLEFVPIWVRIYDLPLVLMTKRRGELYG 220
Query: 62 SMIGEVEEVDKG 73
S +G V EVD G
Sbjct: 221 SKLGHVREVDVG 232
>gi|2129584|pir||S65811 finger protein (clone DW15) - Arabidopsis thaliana retrotransposon
Ta11-1
gi|976277|gb|AAA75253.1| zinc finger protein [Arabidopsis thaliana]
Length = 487
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 35 LNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEV---------DKGVKIN----ITRP 81
L F W+Q+ +P+ T+ G +IGEV+EV + V++N ++RP
Sbjct: 118 LRFMLVWVQIWNIPVNYYTEKAITKLGDLIGEVKEVVFNPVEPQLHEFVRVNVLFDVSRP 177
Query: 82 LMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
L R + + + +TV +YER+ C++ R+ H CP L
Sbjct: 178 LRRSKVINFKNGDT-ATVRFHYERIQKRCYECQRLTHEKDLCPIL 221
>gi|242044240|ref|XP_002459991.1| hypothetical protein SORBIDRAFT_02g020350 [Sorghum bicolor]
gi|241923368|gb|EER96512.1| hypothetical protein SORBIDRAFT_02g020350 [Sorghum bicolor]
Length = 158
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 3 QRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGS 62
+RR L PW R L V+ + + WI++ K+PL MT+ G +
Sbjct: 49 KRRALDDGPWMVGRDLVVVADFDATKRIDEVEFTMIPIWIRVAKMPLGMMTRAAGEMIAW 108
Query: 63 MIGEVEEVDKG----------VKINITRPLMRGLTVQLE-GEENLS 97
+I EVE + G + ++I PLMRG+ V + G+E L
Sbjct: 109 VI-EVEAEEDGTAMGEFMRIKIHMDIRVPLMRGVMVDVGVGDEKLE 153
>gi|4335721|gb|AAD17399.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis
thaliana]
Length = 589
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 1 VDQRRILCTRPWSFNRCLFVLT--EPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGL 58
VD +++L RP FN+ F L EP F N +FW++ +P + V
Sbjct: 98 VDLQKVLNKRPCHFNKWSFALERWEPHVGTSFP----NIMTFWVRTEGIPAEFWDEEVLR 153
Query: 59 LFGSMIGEVEEVD--KG-VKINITR--PLMRGLTVQLEGEENLSTVEVYYERLPDFCFQR 113
FG+ +G V VD KG + I++T PL QL + V++ YE+L +C
Sbjct: 154 NFGNSLGLVRRVDPSKGRILISVTADVPLRFNKNAQLP-SGTVVKVKLSYEKLFRWCSYC 212
Query: 114 GRIGHVFRECPYLKS 128
RI H +CP L +
Sbjct: 213 RRICHELEQCPLLDA 227
>gi|242090373|ref|XP_002441019.1| hypothetical protein SORBIDRAFT_09g018960 [Sorghum bicolor]
gi|241946304|gb|EES19449.1| hypothetical protein SORBIDRAFT_09g018960 [Sorghum bicolor]
Length = 468
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 41 WIQLHKLPL-MSMTKVVGLLFGSMIGEVEEVD------KGVKIN--ITRPLMRGLTVQLE 91
W++L+ +P+ MS V L GS +G V EV K V+I+ + PL + + +++
Sbjct: 120 WVRLYDIPVGMSTYSFVHAL-GSKLGRVLEVGDMVKDFKRVRIDFPLASPLKKSVPIKVR 178
Query: 92 GEENLSTVEVYYERLPDFCFQRGRIGHVFR 121
G L + YE +P FCF GRIGH R
Sbjct: 179 GC-GLLEFQAKYEGIPFFCFNCGRIGHAVR 207
>gi|4522005|gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 6 ILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMT-KVVGLLFGSMI 64
+L PWSF + V+ T D LNF FWIQ+ ++PL + +V+ + GS+
Sbjct: 91 VLRRGPWSFADRMLVVERWTP--DMDPLVLNFIPFWIQVREIPLQFLNLEVIDNIAGSL- 147
Query: 65 GEVEEVD---------KGVKINITRPLMRGLTVQLEGEENL---STVEVYYERLPDFCFQ 112
GE + VD + V+I I + L Q + +L + + YYERL FC
Sbjct: 148 GERKAVDFDPFTTTRVEFVRIQIKWDVNHPLRFQRNYQFSLGVNTVLSFYYERLRGFCDV 207
Query: 113 RGRIGHVFREC 123
GR+ H C
Sbjct: 208 CGRMTHDAGSC 218
>gi|4538900|emb|CAB39637.1| putative protein [Arabidopsis thaliana]
gi|7267665|emb|CAB78093.1| putative protein [Arabidopsis thaliana]
gi|91805577|gb|ABE65517.1| hypothetical protein At4g09700 [Arabidopsis thaliana]
Length = 371
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 6 ILCTRPWSFNRCLFVLT--EPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSM 63
+L P+ F + +F+L EP F F FWI+++ +P+ T++ G
Sbjct: 96 VLKKAPYHFKKWMFILQRWEPIVSEAFPA----FIPFWIKVNDIPMHHCTELTLNTIGQA 151
Query: 64 IGEVEEVDKG-------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRI 116
+G V +DK V IN PL + ++L E ++TV + YE+L CF +
Sbjct: 152 LGPV--IDKDLSDGRIRVNINGLEPLEMKIPIRLPTGE-VTTVFLEYEKLEKHCFSCFSL 208
Query: 117 GHVFRECP 124
H + CP
Sbjct: 209 SHEEKACP 216
>gi|116830579|gb|ABK28247.1| unknown [Arabidopsis thaliana]
Length = 372
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 6 ILCTRPWSFNRCLFVLT--EPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSM 63
+L P+ F + +F+L EP F F FWI+++ +P+ T++ G
Sbjct: 96 VLKKAPYHFKKWMFILQRWEPIVSEAFPA----FIPFWIKVNDIPMHHCTELTLNTIGQA 151
Query: 64 IGEVEEVDKG-------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRI 116
+G V +DK V IN PL + ++L E ++TV + YE+L CF +
Sbjct: 152 LGPV--IDKDLSDGRIRVNINGLEPLEMKIPIRLPTGE-VTTVFLEYEKLEKHCFSCFSL 208
Query: 117 GHVFRECP 124
H + CP
Sbjct: 209 SHEEKACP 216
>gi|3695382|gb|AAC62785.1| F11O4.11 [Arabidopsis thaliana]
gi|7268192|emb|CAB77719.1| putative transposon protein [Arabidopsis thaliana]
Length = 577
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 16/136 (11%)
Query: 2 DQRRILCTRPWSFNRCLFVLT--EPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLL 59
D +++L RP+ F + + +L +P F + FWI+L LP+ K +
Sbjct: 88 DLQKVLDNRPYHFGQWMVILQRWKPVISPSFPSE----IPFWIELQGLPMHYWIKEMLYA 143
Query: 60 FGSMIGEV--EEVDKG-----VKINITRPLMRGLTVQL-EGEENLSTVEVYYERLPDFCF 111
G GEV E+ V IN +P+ + V+ +G E L +E Y+ L C
Sbjct: 144 IGKEAGEVVDHEISPAAAKIKVLINGLQPITKETVVEFPDGSEALVYLE--YKNLKSHCH 201
Query: 112 QRGRIGHVFRECPYLK 127
R+ H +CP LK
Sbjct: 202 HCQRLSHAEADCPGLK 217
>gi|357468493|ref|XP_003604531.1| hypothetical protein MTR_4g014190 [Medicago truncatula]
gi|355505586|gb|AES86728.1| hypothetical protein MTR_4g014190 [Medicago truncatula]
Length = 382
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 2 DQRRILCTRPWSF-NRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPL----MSMTKVV 56
D+ +LC P++ NR + V + DF K+ L WIQL LPL + +
Sbjct: 180 DKNTVLCAGPYTIANRPVIVKSWAPDF-DFQKEILKVVPLWIQLPNLPLTCWGLDFLSRI 238
Query: 57 GLLFGSMIGEVEEVDKG---------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLP 107
G G+ + E K V+I++TRPL+ + V+ + + Y+ P
Sbjct: 239 GSTLGNPLFADECTSKQSRISYARLLVEIDVTRPLLYKVMVESPDGKCFEQ-RIVYDWEP 297
Query: 108 DFCFQRGRIGHV 119
FC + ++GHV
Sbjct: 298 SFCKKCQQVGHV 309
>gi|242044246|ref|XP_002459994.1| hypothetical protein SORBIDRAFT_02g020370 [Sorghum bicolor]
gi|241923371|gb|EER96515.1| hypothetical protein SORBIDRAFT_02g020370 [Sorghum bicolor]
Length = 216
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 5 RILCTR-PWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSM----TKVVGLL 59
+ + TR PW ++ G S+ ++ W+Q H +P+ M T+V+
Sbjct: 83 KFVTTRGPWRHRGDALIVVPYDGFRHPSEIIIDRIGLWVQFHDVPVFLMMKAFTEVIAKK 142
Query: 60 FGSMIGEV-EEVDKGVKINITRPLMRGLTVQLEGE---ENLSTVEVYYERLPDFCFQRGR 115
S I E+ V +++ + PL L +E + L V YE +P+FCF GR
Sbjct: 143 ISSDIVEIIGVVGDFLRVRLMFPLSDALHNFVEQRVKGQGLLRFNVKYENVPNFCFLCGR 202
Query: 116 IGHVFRECP 124
IGH CP
Sbjct: 203 IGHDEDVCP 211
>gi|332322117|emb|CCA66019.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 859
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 13 SFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDK 72
+FN L VL + F N + + W++L +PL+ +K + S IG+V D+
Sbjct: 97 NFNGALLVLKPWKPLDSFKSFNFSESAIWVRLEGIPLVFNSKSIANELLSRIGKVLLFDE 156
Query: 73 -----GVK--------INITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHV 119
G+K + I PL+ G+ ++++ L V++ YE + FC + G+IGH
Sbjct: 157 NSERPGIKKFFRALVWLKIKAPLVPGMYIEVQENRTL-WVDLRYEGIFVFCKRCGKIGHK 215
Query: 120 FREC 123
C
Sbjct: 216 SSSC 219
>gi|357479215|ref|XP_003609893.1| hypothetical protein MTR_4g124120 [Medicago truncatula]
gi|355510948|gb|AES92090.1| hypothetical protein MTR_4g124120 [Medicago truncatula]
Length = 280
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 6 ILCTRPWSFNRCLFVLTEPTGIG-DFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMI 64
+L PW+++ VL E IG LN+ + W++++ L M + VG+ F
Sbjct: 4 VLKGGPWTYDNHSLVL-EKLRIGVSLKDIQLNYMNLWVRVYNLSTGMMKEKVGMGFWR-- 60
Query: 65 GEVEEVDKGVKINITRPLMRGLTVQL-EGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
E + V+ +I +PL G ++ EGE V YE+L FCF G +GH +C
Sbjct: 61 ---EYMRLKVRFDIRQPLKIGKKIKANEGE--WCVVNFKYEKLGTFCFVCGVLGHSENKC 115
>gi|356569564|ref|XP_003552969.1| PREDICTED: villin-1-like [Glycine max]
Length = 972
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 4 RRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSM 63
++I+ PW+F++ + +L E + + +L+ FW+Q LP S ++ V G+
Sbjct: 2 QKIINLSPWNFDKRIIILVELKSDANLEEFDLSTSLFWVQESDLPRASRSEAVAQTIGNS 61
Query: 64 IG------EVEEVDKG--VKINITRPLMRGLTV 88
IG +++E+ G ++I + ++RGL V
Sbjct: 62 IGTFLTWDDIDEIMYGKVMRIRVQLNVLRGLEV 94
>gi|116830453|gb|ABK28184.1| unknown [Arabidopsis thaliana]
Length = 488
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 35 LNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEE-------------VDKGVKINITRP 81
L + W+Q+ +P+ T G +IGEV+E V V +++RP
Sbjct: 118 LRYMLLWVQIWNIPVNYNTAKAITKLGDLIGEVKEVVFNPELKQIREFVRVKVLFDVSRP 177
Query: 82 LMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
L R V + +TV +YER+ C++ R+ H CP L
Sbjct: 178 LRRSKVVNFRNGGS-ATVNFHYERIQKRCYECQRLTHEKDVCPIL 221
>gi|4335718|gb|AAD17396.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis
thaliana]
Length = 483
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 35 LNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEE-------------VDKGVKINITRP 81
L + W+Q+ +P+ T G +IGEV+E V V +++RP
Sbjct: 114 LRYMLLWVQIWNIPVNYNTAKAITKLGDLIGEVKEVVFNPELKQIREFVRVKVLFDVSRP 173
Query: 82 LMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
L R V + +TV +YER+ C++ R+ H CP L
Sbjct: 174 LRRSKVVNFRNGGS-ATVNFHYERIQKRCYECQRLTHEKDVCPIL 217
>gi|399920227|gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 19/131 (14%)
Query: 4 RRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSM 63
+R++ PWS C F + L+ W+Q+H LPL MT L G
Sbjct: 219 QRLMAKSPWSVMGCSFSIHPWPIESRLEDIPLHMLEIWVQVHGLPLGQMTLANARLIGER 278
Query: 64 IGEVEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRG--------- 114
+G V+ V+ R + + VQ++ + L +P F ++
Sbjct: 279 VGIVQAVEDPHSTGGRRAFL-CIRVQIDSSKPL---------VPGFWSKKAAGTPVWADI 328
Query: 115 RIGHVFRECPY 125
R+GH R+CP+
Sbjct: 329 RLGHGSRQCPH 339
>gi|15228461|ref|NP_189800.1| zinc ion binding / nucleic acid binding protein [Arabidopsis
thaliana]
gi|6735287|emb|CAB68115.1| putative protein [Arabidopsis thaliana]
gi|332644200|gb|AEE77721.1| zinc ion binding / nucleic acid binding protein [Arabidopsis
thaliana]
Length = 273
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 22/119 (18%)
Query: 6 ILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIG 65
IL PWSFN + V+ T + S FWIQ+ +PL +T + G +G
Sbjct: 75 ILRRGPWSFNDWMCVIQRWTKL--HSDAEFKRIPFWIQIRGIPLRFLTARIITSIGERMG 132
Query: 66 EVEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECP 124
E + G ++S ++ YE+L +FC G + H ECP
Sbjct: 133 LFLETNLG--------------------RDVSVLKFQYEKLKNFCTTCGMLSHDASECP 171
>gi|332322098|emb|CCA65994.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 803
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 16/134 (11%)
Query: 10 RPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLP--LMSMTKVVGLLFGSMIGEV 67
RPW L VL D + + + W+++ +LP L++ + LL + IG +
Sbjct: 401 RPWHIQGDLLVLQPWKPSFDPYLEEIKWVDLWVRIPRLPTELLNFDSIANLLASNDIGAL 460
Query: 68 EEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRG 114
++D+ ++++I PL+ V G+ V ++YE C G
Sbjct: 461 IKLDQRSLLRNKIRFARACIRVDIQGPLLEFAEVSRSGDLRHGYV-IWYEDFSAGCSFCG 519
Query: 115 RIGHVFRECPYLKS 128
I H+ CP L S
Sbjct: 520 EIAHLIEACPLLNS 533
>gi|218196860|gb|EEC79287.1| hypothetical protein OsI_20089 [Oryza sativa Indica Group]
Length = 892
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 44 LHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLTVQL 90
++ LP M G L G+ IG+ EVD V ++ + L+RG+ ++
Sbjct: 57 VYNLPFGLMNVDTGRLIGNKIGKALEVDTDEDGSAVGGYLRVKVLMDARKALIRGVMMEG 116
Query: 91 EGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
E + V YE LP+FC+ G +GHV EC
Sbjct: 117 VAGEKENWCGVKYEFLPNFCYSCGVLGHV-EEC 148
>gi|20197407|gb|AAM15063.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
gi|20197578|gb|AAM15139.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 267
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 2 DQRRILCTRPWSFNRCLFVLT--EPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLL 59
D ++++ RP+ F++ + +L EP F + SFWI+L LP +
Sbjct: 83 DLQQVVDNRPYHFDQWMVILQKWEPIISPSFP----SLISFWIELQGLPKHFWKPKMLQA 138
Query: 60 FGSMIGEV---EEVDKGVKINIT----RPLMRGLTVQL-EGEENLSTVEVYYERLPDFCF 111
+GEV E VKI + +PL++ V G E + V + Y+ L + C
Sbjct: 139 IREELGEVMTKEITSSSVKIKVLLDGLQPLIKETIVDFPNGGE--AVVYLDYKNLKNHCL 196
Query: 112 QRGRIGHVFRECPYLKSSPTN 132
R+ H + CP ++S+P +
Sbjct: 197 HCQRLSHEKKNCPRVQSAPVS 217
>gi|357442641|ref|XP_003591598.1| hypothetical protein MTR_1g089420, partial [Medicago truncatula]
gi|355480646|gb|AES61849.1| hypothetical protein MTR_1g089420, partial [Medicago truncatula]
Length = 151
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +L T PWSF+R + VL G S ++ FW +++ LPL + + G
Sbjct: 83 DADTVLKTGPWSFDRNIVVLKHLPGDEQPSDLEMHSSEFWARIYDLPLKLRSDAMAKKLG 142
Query: 62 SMIGEVEEV 70
++G+ EV
Sbjct: 143 DVLGKFMEV 151
>gi|54606737|dbj|BAD66760.1| orf120b [Beta vulgaris subsp. vulgaris]
gi|54606775|dbj|BAD66798.1| orf120b [Beta vulgaris subsp. vulgaris]
gi|384939204|emb|CBL52051.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
maritima]
Length = 120
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 55 VVGLLFGSMIG----EVEEVDKGVKINI----TRPLMRGLTVQLEGEENLSTVEVYYERL 106
++G GS I + E+DK ++I + +PL + + +++ G + EV YE+L
Sbjct: 1 MIGKKIGSFIQLDKWDSMEIDKSLRIRVLIDARKPLTQKIKLKMRGGQE-DFAEVKYEKL 59
Query: 107 PDFCFQRGRIGHVFRECP--------------YLKSSPTNF 133
P FC+ G++GH ++C +LK+SP F
Sbjct: 60 PLFCYYCGKLGHGTKDCDEFFGEESPQKKYGEWLKASPWKF 100
>gi|323435053|ref|YP_004222271.1| hypothetical protein BevumaM_p032 [Beta vulgaris subsp. maritima]
gi|317905706|emb|CBJ14095.1| hypothetical protein [Beta vulgaris subsp. maritima]
gi|319439786|emb|CBJ17504.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 120
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 55 VVGLLFGSMIG----EVEEVDKGVKINI----TRPLMRGLTVQLEGEENLSTVEVYYERL 106
++G GS I + E+DK ++I + +PL + + +++ G + EV YE+L
Sbjct: 1 MIGKKIGSFIQLDKWDSMEIDKSLRIRVLIDARKPLTQKIKLKMRGGQEY-LAEVKYEKL 59
Query: 107 PDFCFQRGRIGHVFRECP--------------YLKSSPTNF 133
P FC+ G++GH ++C +LK+SP F
Sbjct: 60 PLFCYYCGKLGHGTKDCDEFFGEESPQKKYGEWLKASPWKF 100
>gi|9838415|ref|NP_064028.1| orf120 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|346683146|ref|YP_004842078.1| hypothetical protein BemaM_p030 [Beta macrocarpa]
gi|9049329|dbj|BAA99339.1| orf120 [Beta vulgaris subsp. vulgaris]
gi|345500064|emb|CBX24880.1| hypothetical protein [Beta macrocarpa]
Length = 120
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 23/101 (22%)
Query: 55 VVGLLFGSMIG----EVEEVDKGVKINI----TRPLMRGLTVQLEGEENLSTVEVYYERL 106
++G GS I + E+DK ++I + +PL + + +++ G + EV YE+L
Sbjct: 1 MIGKKIGSFIQLDKWDSMEIDKSLRIRVLIDARKPLTQKIKLKMRGGQEY-FAEVKYEKL 59
Query: 107 PDFCFQRGRIGHVFRECP--------------YLKSSPTNF 133
P FC+ G++GH ++C +LK+SP F
Sbjct: 60 PLFCYYCGKLGHGTKDCDEFFGEESPQKKYGEWLKASPWKF 100
>gi|297725597|ref|NP_001175162.1| Os07g0417800 [Oryza sativa Japonica Group]
gi|255677701|dbj|BAH93890.1| Os07g0417800, partial [Oryza sativa Japonica Group]
Length = 246
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D + +L PW ++ G+ SK L WI+++ LPL+ MTK G L+G
Sbjct: 64 DYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYG 123
Query: 62 SMIGEVEEVD 71
S G V EVD
Sbjct: 124 SRFGCVREVD 133
>gi|255572550|ref|XP_002527209.1| conserved hypothetical protein [Ricinus communis]
gi|223533427|gb|EEF35176.1| conserved hypothetical protein [Ricinus communis]
Length = 103
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNF-CSFWIQLHKLPLMSMTKVVGLL 59
+D +RI+ PW+F+ + +L G+ S L F + W+Q+H+LP+ M+K VG
Sbjct: 33 LDLKRIMEGGPWTFDNHMLILHHLQQ-GEISSNILLFYIAVWVQIHELPIGCMSKAVGRQ 91
Query: 60 FGSMIGEVEE 69
+ IG E
Sbjct: 92 LSNFIGTFME 101
>gi|55167960|gb|AAV43829.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55168037|gb|AAV43905.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 796
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 16/133 (12%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R++ PW F C +L E G + L W+Q+H L T +
Sbjct: 113 DWERVMEEGPWIFRGCPVLLAEYDGWSEIESVVLETYPTWVQIHDLKEKIRTGSIATQLV 172
Query: 62 SMIGEVEEVDKG------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDF 109
G V ++D+ VK+++ P R T+ + + YE++ F
Sbjct: 173 RKAGTVIKLDEASVKGSGDGVRVRVKVDVPSPASRSTTLN----KKKWFFRLMYEKMLVF 228
Query: 110 CFQRGRIGHVFRE 122
C G +GHV +E
Sbjct: 229 CGICGLVGHVTKE 241
>gi|218196866|gb|EEC79293.1| hypothetical protein OsI_20101 [Oryza sativa Indica Group]
Length = 210
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 14/93 (15%)
Query: 44 LHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLTVQL 90
++ LP M G L G+ IG+ EVD V ++ + L+RGL ++
Sbjct: 57 VYNLPFGLMNVDTGRLIGNKIGKALEVDTDEDGSAVGGYLRVKVLMDARKALIRGLMMEG 116
Query: 91 EGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
E + V YE LP+FC+ G +GHV EC
Sbjct: 117 VAGEKENWCGVKYEFLPNFCYSCGVLGHV-EEC 148
>gi|255543979|ref|XP_002513052.1| conserved hypothetical protein [Ricinus communis]
gi|223548063|gb|EEF49555.1| conserved hypothetical protein [Ricinus communis]
Length = 501
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 42 IQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLTV 88
+Q+HK P ++ V G+ +G E D+ +KI++++P+M + +
Sbjct: 52 VQVHKAPCGCRSEKVVKSIGNYVGTYVESDEKNFDGSWKEFIRVKIKIDVSKPIMAFMKI 111
Query: 89 QLEGEENLSTVEVYYERLPDFCFQRGRIGH 118
+ G + L+ +E YERL CF GR+GH
Sbjct: 112 KKPGGDWLN-LEFNYERLGIACFICGRVGH 140
>gi|79329079|ref|NP_001031973.1| nucleic acid binding / zinc ion binding protein [Arabidopsis
thaliana]
gi|9759035|dbj|BAB09362.1| unnamed protein product [Arabidopsis thaliana]
gi|98962129|gb|ABF59394.1| unknown protein [Arabidopsis thaliana]
gi|332006676|gb|AED94059.1| nucleic acid binding / zinc ion binding protein [Arabidopsis
thaliana]
Length = 361
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 18/130 (13%)
Query: 11 PWSFNRCLFVLTEPTGIGDFSKQN-LNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEE 69
PW FN L DF ++ L F W+ + +PL +++ + S +GEV
Sbjct: 96 PWVFNEWFIALQR---WEDFPTEDFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVA 152
Query: 70 VD-------------KGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRI 116
+D V+++ T PL V+ E + + YE+L C R+
Sbjct: 153 MDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRER-AMIGFEYEKLQRVCTNCCRV 211
Query: 117 GHVFRECPYL 126
H CPY+
Sbjct: 212 NHQVSHCPYV 221
>gi|242064856|ref|XP_002453717.1| hypothetical protein SORBIDRAFT_04g011150 [Sorghum bicolor]
gi|241933548|gb|EES06693.1| hypothetical protein SORBIDRAFT_04g011150 [Sorghum bicolor]
Length = 160
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
V + I +PL RG+ +++ E + YE+LP FC+ G IGH EC
Sbjct: 27 VAMEIDKPLRRGVLLRMSKNEEPRWFHIQYEKLPYFCYGCGVIGHSKVEC 76
>gi|357487723|ref|XP_003614149.1| hypothetical protein MTR_5g045440 [Medicago truncatula]
gi|355515484|gb|AES97107.1| hypothetical protein MTR_5g045440 [Medicago truncatula]
Length = 720
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 41 WIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLT 87
WI+L LP + S+IG +D V ++ TR L +
Sbjct: 168 WIRLMALPQEYWMDMTLREISSVIGTPVLIDNATSKRLFGHYARILVDMDFTRKLFYEIV 227
Query: 88 VQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
V+ EG VEV YER+PDFC IGH C ++
Sbjct: 228 VEREGFA--FPVEVVYERMPDFCTHCQNIGHHISVCRWI 264
>gi|15231551|ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana]
gi|332644154|gb|AEE77675.1| uncharacterized protein [Arabidopsis thaliana]
Length = 336
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 6 ILCTRPWSFNRCLFVLT--EPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSM 63
+L PW+FN + +L EP I F F FW+Q+ +P + + V G
Sbjct: 186 VLRRGPWAFNDWMILLQRWEPQ-IPLFP-----FIPFWVQIRGIPFQFLNRGVVEHIGRA 239
Query: 64 IGEVEEVDKGVKI-------------NITRPLMRGLTVQLEGEENLSTVEVYYERLPDFC 110
+G+V + D V++ +IT PL Q N + + YERL FC
Sbjct: 240 LGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVN-TLLRFRYERLRGFC 298
Query: 111 FQRGRIGHVFREC 123
G + H F C
Sbjct: 299 EVCGMLTHDFGAC 311
>gi|8777563|dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidopsis thaliana]
Length = 241
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 6 ILCTRPWSFNRCLFVLT--EPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSM 63
+L PW+FN + +L EP I F F FW+Q+ +P + + V G
Sbjct: 91 VLRRGPWAFNDWMILLQRWEPQ-IPLFP-----FIPFWVQIRGIPFQFLNRGVVEHIGRA 144
Query: 64 IGEVEEVDKGVKI-------------NITRPLMRGLTVQLEGEENLSTVEVYYERLPDFC 110
+G+V + D V++ +IT PL Q N + + YERL FC
Sbjct: 145 LGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVN-TLLRFRYERLRGFC 203
Query: 111 FQRGRIGHVFREC 123
G + H F C
Sbjct: 204 EVCGMLTHDFGAC 216
>gi|255585167|ref|XP_002533288.1| conserved hypothetical protein [Ricinus communis]
gi|223526891|gb|EEF29099.1| conserved hypothetical protein [Ricinus communis]
Length = 196
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Query: 46 KLPLMSMTKVVGLLFGSMIGEVEEVDK---------GVKINITRPLMRGLTVQLEGEENL 96
++PL+ ++ GS + V V+IN+ +PL+ L L+G
Sbjct: 98 RIPLLGRRTILNSCLGSFSKDASSVIPPAYPRGYWVAVEINLLKPLVSKL--HLDG---- 151
Query: 97 STVEVYYERLPDFCFQRGRIGHVFRECP 124
T +V YE LP CF+ GR+GH CP
Sbjct: 152 FTHKVEYEGLPQVCFECGRVGHAETLCP 179
>gi|242067026|ref|XP_002454802.1| hypothetical protein SORBIDRAFT_04g037710 [Sorghum bicolor]
gi|241934633|gb|EES07778.1| hypothetical protein SORBIDRAFT_04g037710 [Sorghum bicolor]
Length = 159
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 13/96 (13%)
Query: 3 QRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGS 62
+++ + PW F + L V+ + G + W++ LPL M + G G
Sbjct: 62 KKKAIEDGPWMFGKDLIVVVDFDGKKRLEDIKFDRIPIWLRASGLPLGMMNRETGQAIGD 121
Query: 63 MIGEVEEVDKG-------------VKINITRPLMRG 85
+G ++D +K++IT+PLMRG
Sbjct: 122 EVGVFVDMDLDEDGSAVGQFLRIKIKLDITKPLMRG 157
>gi|357457561|ref|XP_003599061.1| hypothetical protein MTR_3g027260 [Medicago truncatula]
gi|355488109|gb|AES69312.1| hypothetical protein MTR_3g027260 [Medicago truncatula]
Length = 572
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYLKSSPTN 132
V ++ TR L + V+ EG +VEV Y+R+PDFC IGH C ++ N
Sbjct: 223 VDMDFTRKLFYEIVVEREGFA--FSVEVVYDRMPDFCTNCKNIGHHISVCRWIHPRKEN 279
>gi|147826851|emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
Length = 395
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 31 SKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG--------VKINITRPL 82
+ +++++ W++L L T V + S G+ +D +++++ PL
Sbjct: 98 NSKSMSYTQMWMKLPDLDRCYWTNEVLSMMASSAGQPIAIDTSSSDEARVCIEVDVNEPL 157
Query: 83 MRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPY 125
+ G+ V +GE + + +P CF GRIGH CP+
Sbjct: 158 VTGVHVD-DGEGGF--WQSFRYEIPGLCFHCGRIGHKREYCPH 197
>gi|242071133|ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
gi|241936686|gb|EES09831.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
Length = 1209
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D +RI+ PW F C +L E G WIQ+H++P + T+ +
Sbjct: 95 DWKRIMEEGPWIFRGCALMLEEFDGSTAVPTVVPCKVPAWIQIHRIPHLYRTESILKQLA 154
Query: 62 SMIGEVEEVDKG-----------VKINI--TRPLMRGLTVQLEGEEN 95
+GE V+ V++N+ +PL+R +T+ EG N
Sbjct: 155 GKVGEEVAVEMKAVSTISGDFFRVRVNLFAQKPLVRFVTLSPEGNRN 201
>gi|357464161|ref|XP_003602362.1| hypothetical protein MTR_3g092560 [Medicago truncatula]
gi|355491410|gb|AES72613.1| hypothetical protein MTR_3g092560 [Medicago truncatula]
Length = 361
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 16/122 (13%)
Query: 26 GIGDFSKQNLN--FCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKGVKINITRPLM 83
+ DF+ N N W++ H LPL IG +D+ I+
Sbjct: 156 SLKDFNSFNHNQTHSQVWVRFHYLPLEYWHPKFLFEIAGAIGTPILIDENNTIHFFGHYA 215
Query: 84 RGL-----------TVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYLKSSPTN 132
R L ++ +E EE +E+ YE+LP CF IGH C K P+N
Sbjct: 216 RVLVDINLVGILPDSLWVEREEYTFEIEIEYEKLPYSCFTCNYIGHSLDHC---KKDPSN 272
Query: 133 FI 134
I
Sbjct: 273 KI 274
>gi|357452231|ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago truncatula]
gi|355485440|gb|AES66643.1| hypothetical protein MTR_2g076760 [Medicago truncatula]
Length = 513
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 52/139 (37%), Gaps = 15/139 (10%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
+D R + + + + L E T + KQ WI+L +LP
Sbjct: 130 IDLRMVWASGTVNLKPGVLRLFEWTKDFNMHKQRNTHAQVWIRLMELPQEYWMDRTLREI 189
Query: 61 GSMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLP 107
S IG +D V ++ R + +TV+ EG VEV YE LP
Sbjct: 190 SSAIGTPLIIDNATTKRLYGHYARILVDMDFARKMFHEITVEREGYA--FNVEVAYEWLP 247
Query: 108 DFCFQRGRIGHVFRECPYL 126
DFC IGH C +L
Sbjct: 248 DFCSHCQNIGHDVTVCRWL 266
>gi|357456449|ref|XP_003598505.1| NADPH:quinone oxidoreductase [Medicago truncatula]
gi|355487553|gb|AES68756.1| NADPH:quinone oxidoreductase [Medicago truncatula]
Length = 427
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 29 DFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VK 75
D Q + W++L LP K+ S IG +D+ V
Sbjct: 113 DPHNQTQSHAQLWVRLLNLPQEHWRKITLFEIASGIGTPLTIDEATQSRLFGHYARILVD 172
Query: 76 INITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
++++ L + V+ EG TVE YER P FC +GH ++C
Sbjct: 173 VDMSDTLFNSVVVEREGYAFPVTVE--YERRPSFCSHCKMLGHSIQDC 218
>gi|255559106|ref|XP_002520575.1| conserved hypothetical protein [Ricinus communis]
gi|223540235|gb|EEF41808.1| conserved hypothetical protein [Ricinus communis]
Length = 167
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLF 60
+D +R++ PWSF+ L V + ++ LNF W+ +++LP+ M+ +V
Sbjct: 81 LDSKRVIDGGPWSFDNHLLVYDQLLLGEILAQMKLNFLDMWVHVYELPVGFMSVMVSKQL 140
Query: 61 GSMIGEVEEVDKGVKINITRPLMR 84
+ E + ++ R MR
Sbjct: 141 NKFVEEFLDYVVNNNTSVWRSYMR 164
>gi|242081207|ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
gi|241941722|gb|EES14867.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
Length = 589
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 83 MRGLTVQL-EGEENLST-VEVYYERLPDFCFQRGRIGHVFREC 123
MRG+T+ + EGEE + YE LPDFC+ G IGH R C
Sbjct: 1 MRGVTIDVGEGEEVKPLWCPLCYEFLPDFCYTCGLIGHTDRMC 43
>gi|297815890|ref|XP_002875828.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321666|gb|EFH52087.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 35 LNFCSFWIQLHKLPL-MSMTKVVGLLFGSMIGEVE--EVDKG-----------VKINITR 80
L F WIQ+ KLP+ TK + L +IG+V+ E + G V +++R
Sbjct: 118 LQFIHIWIQIWKLPINFYTTKAISSL-ADLIGQVKVVEFEPGKPQILPFVRVQVLFDVSR 176
Query: 81 PLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECP 124
PL R V L ++V YER+ C++ + H CP
Sbjct: 177 PLRRAKVVNLP-HGGTTSVNFEYERIQKRCYECQCLTHERDSCP 219
>gi|342365825|gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 1613
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 23/133 (17%)
Query: 1 VDQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCS--FWIQLHKLPLMSMTKVVGL 58
D+ +++ PW + +V +P + DF +F S WIQ+ LP+ + L
Sbjct: 140 TDREKVILGGPWLID-GHYVAVKPWDV-DFRPCEKSFGSTLVWIQVSGLPIWCYQEQAML 197
Query: 59 LFGSMIGEVEEVDKG-------------VKINITRPLMRGLTVQLEGEENLSTVEVYYER 105
S IG +VD V+IN+ P+++ + V EG T EV YE
Sbjct: 198 RIASAIGIPVKVDLATKLAERGKYARACVQINLELPVIKHIIV--EG----VTYEVEYES 251
Query: 106 LPDFCFQRGRIGH 118
LP C R GH
Sbjct: 252 LPLICATCARYGH 264
>gi|28207064|gb|AAO37172.1| hypothetical protein [Arabidopsis thaliana]
Length = 305
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLP--------LMSMT 53
D + +L T W+ + V+ + D L F W++L +P + S+
Sbjct: 88 DLQEVLKTGVWTQDDWGVVMER--WVEDLPPNYLMFLLIWLRLRNIPVNHYTQATIKSIA 145
Query: 54 KVVGLLFGSMIGEVEEVDKG-VKINITRPLMRGLTVQLEGE-ENLSTVEV--YYERLPDF 109
K VG + E E K V+I I + +GL E + N S V++ YER+
Sbjct: 146 KCVGQVIEFPFDENEAQSKDYVRIRILFDVSKGLRNSKEIQLPNGSMVKIGIDYERIRKR 205
Query: 110 CFQRGRIGHVFRECPYLKS 128
CFQ R+ H CPYL S
Sbjct: 206 CFQCQRLTHEKPRCPYLPS 224
>gi|255571817|ref|XP_002526851.1| conserved hypothetical protein [Ricinus communis]
gi|223533750|gb|EEF35482.1| conserved hypothetical protein [Ricinus communis]
Length = 335
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 49 LMSMTKVVGLLFGSMIGEVEEVDKG------------VKINITRPLMRGLTVQLEGEENL 96
+ + +K G+ IG V ++D ++I++ +PL + + + +++
Sbjct: 1 MKARSKEAIKAIGARIGTVLDIDDTSMEGLERSVRLRIRIDLRKPLRKRTKIAMGSNKDM 60
Query: 97 STVEVYYERLPDFCFQRGRIGHVFREC 123
V YERLP FC+ G +GHV R+C
Sbjct: 61 -WVFFRYERLPSFCYVCGCLGHVMRDC 86
>gi|297724159|ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group]
gi|255676397|dbj|BAH93171.1| Os05g0434000 [Oryza sativa Japonica Group]
Length = 1478
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 44 LHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLTVQL 90
++ LP M G + G+ IG+ EVD V ++ + L+ G+ ++
Sbjct: 131 VYNLPFGLMNVDTGRVIGNKIGKALEVDTDEDGSAVGGYLLVKVLMDARKALIGGVMMEG 190
Query: 91 EGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
E + V YE LP+FC+ G +GHV EC
Sbjct: 191 VAGEKENWCGVKYEFLPNFCYSCGVLGHV-EEC 222
>gi|49328177|gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1264
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 44 LHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLTVQL 90
++ LP M G + G+ IG+ EVD V ++ + L+ G+ ++
Sbjct: 131 VYNLPFGLMNVDTGRVIGNKIGKALEVDTDEDGSAVGGYLLVKVLMDARKALIGGVMMEG 190
Query: 91 EGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
E + V YE LP+FC+ G +GHV EC
Sbjct: 191 VAGEKENWCGVKYEFLPNFCYSCGVLGHV-EEC 222
>gi|4581112|gb|AAD24602.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis
thaliana]
Length = 240
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 41 WIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLT 87
WI+L +P+ T+ +G+V +V+ V +++ PL +
Sbjct: 123 WIRLRNIPVNYYTEETIKKIAGCVGQVVKVELDLEKSQAQDYVRVQVNLDVRNPLRNSKS 182
Query: 88 VQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYLKSSPTNFIL 135
VQ+ E +S V YER+ CF R+ H +CPY+ FIL
Sbjct: 183 VQVPSGEVVS-VTFDYERIRKRCFFCQRLTHDKADCPYVNKKIRIFIL 229
>gi|61742570|gb|AAX55106.1| hypothetical protein At2g05290 [Arabidopsis thaliana]
Length = 383
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 27 IGDFSKQNLNFCSFWIQLHKLP--------LMSMTKVVGLLFGSMIGEVEEVDKG-VKIN 77
+ D L F W++L +P + S+ K VG + E E K V+I
Sbjct: 111 VEDLPPNYLMFLLIWLRLRNIPVNHYTQATIKSIAKCVGQVIEFPFDENEAQSKDYVRIR 170
Query: 78 ITRPLMRGLTVQLEGE-ENLSTVEV--YYERLPDFCFQRGRIGHVFRECPYLKS 128
I + +GL E + N S V++ YER+ CFQ R+ H CPYL S
Sbjct: 171 ILFDVSKGLRNSKEIQLPNGSMVKIGIDYERIRKRCFQCQRLTHEKPRCPYLPS 224
>gi|4755198|gb|AAD29065.1| putative Ta11-like non-LTR retroelement protein [Arabidopsis
thaliana]
Length = 233
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLP--------LMSMT 53
D + +L T W+ + V+ + D L F W++L +P + S+
Sbjct: 77 DLQEVLKTGVWTQDDWGVVMER--WVEDLPPNYLMFLLIWLRLRNIPVNHYTQATIKSIA 134
Query: 54 KVVGLLFGSMIGEVEEVDKG-VKINITRPLMRGLTVQLEGE---ENLSTVEVYYERLPDF 109
K VG + E E K V+I I + +GL E + ++ + + YER+
Sbjct: 135 KCVGQVIEFPFDENEAQSKDYVRIRILFDVSKGLRNSKEIQLPNGSMVKIGIDYERIRKR 194
Query: 110 CFQRGRIGHVFRECPYLKS 128
CFQ R+ H CPYL S
Sbjct: 195 CFQCQRLTHEKPRCPYLPS 213
>gi|255566454|ref|XP_002524212.1| conserved hypothetical protein [Ricinus communis]
gi|223536489|gb|EEF38136.1| conserved hypothetical protein [Ricinus communis]
Length = 207
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 95 NLSTVEVYYERLPDFCFQRGRIGHVFR----ECPYLKSSPTNFIL 135
NL + + YER+PDFC++ G++GH+ R E P FI+
Sbjct: 115 NLVWINLKYERVPDFCYRGGKLGHLIRVSNEEVPEANHENLKFIM 159
>gi|9758156|dbj|BAB08713.1| unnamed protein product [Arabidopsis thaliana]
Length = 439
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 26/140 (18%)
Query: 2 DQRRILCTRPWSFNRCLFVLT--EPTGIGDFSKQNLNFCSFWIQLHKLP--------LMS 51
D R L +P+ F++ + + EPT DF Q FWI + + L+S
Sbjct: 92 DLARALKYQPYHFSQWMIIFQRWEPTIDKDFPSQ----IPFWINVQGVSIHLWSEGILVS 147
Query: 52 MTKVVGLLFGSMIGEVEEVDKG-----VKINITRPLMRGLTVQLEGEENLSTVEVYYERL 106
+ K VG+L E EV V +N +PL+ V+ E + + YE+L
Sbjct: 148 IAKSVGVL------EKTEVSSTFFRMRVLVNGLKPLVLKTIVEFEDGSEVEA-SLVYEKL 200
Query: 107 PDFCFQRGRIGHVFRECPYL 126
++C ++ H CP L
Sbjct: 201 RNYCKSCYKLDHSHLSCPLL 220
>gi|357489411|ref|XP_003614993.1| hypothetical protein MTR_5g062140 [Medicago truncatula]
gi|355516328|gb|AES97951.1| hypothetical protein MTR_5g062140 [Medicago truncatula]
Length = 449
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
Query: 41 WIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLT 87
WI+L +LP + S IG +DK V ++ +R L +
Sbjct: 93 WIRLLELPQEYWMEQTLREIASAIGTPLLIDKVTSKRLFGHYARILVDMDFSRKLFHEIE 152
Query: 88 VQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
V+ +G T+EV YE LPDFC IGH C +L
Sbjct: 153 VERQGYS--FTLEVAYEWLPDFCSHCQNIGHDVTACRWL 189
>gi|357470555|ref|XP_003605562.1| hypothetical protein MTR_4g033820 [Medicago truncatula]
gi|355506617|gb|AES87759.1| hypothetical protein MTR_4g033820 [Medicago truncatula]
Length = 439
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 17/110 (15%)
Query: 29 DFSKQNL--NFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG------------- 73
DF QN + W++L P K S IG +D+G
Sbjct: 25 DFDPQNQIQSHVQLWVRLMNPPQEYWRKTTLFEIASGIGTPLTIDEGTQSRLFGHYARIL 84
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
V ++++ L + V+ EG V V YER P FC+ +GH + C
Sbjct: 85 VDVDMSGKLFDSMVVEREGFA--FPVAVEYERKPSFCYHCKLLGHSIQHC 132
>gi|357469901|ref|XP_003605235.1| hypothetical protein MTR_4g026990 [Medicago truncatula]
gi|355506290|gb|AES87432.1| hypothetical protein MTR_4g026990 [Medicago truncatula]
Length = 332
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
V I+ ++ + + V+ EG VEV YER+PDFC +GH C +L
Sbjct: 35 VDIDFSKKIFHEIIVEREGAS--YPVEVVYERIPDFCSHCQTLGHDVTSCRWL 85
>gi|357439083|ref|XP_003589818.1| hypothetical protein MTR_1g039680 [Medicago truncatula]
gi|355478866|gb|AES60069.1| hypothetical protein MTR_1g039680 [Medicago truncatula]
Length = 481
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 49/138 (35%), Gaps = 12/138 (8%)
Query: 2 DQRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFG 61
D R + S L L E T + Q WI+L +LP +
Sbjct: 144 DMRTVWAAGTVSLKPGLLRLFEWTKDFNLHTQRQTHTQVWIRLWELPQEYWMERTLYEIA 203
Query: 62 SMIGEVEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFR 121
+G +D N+TR + G V +E E + + YE LP+FC IGH
Sbjct: 204 GAVGTPLLID-----NVTRNRLYGHYVLVEREGFSFPIAIEYEGLPEFCTHCHSIGHNIN 258
Query: 122 EC-------PYLKSSPTN 132
C P PTN
Sbjct: 259 LCRRLHPRRPETHEQPTN 276
>gi|222637450|gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
Length = 915
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 3 QRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGS 62
+R L PW F + L ++ + + F WI+ K+PL M K +G G
Sbjct: 63 KRHALEDGPWMFGKDLVIVVDYDESKVLEEMVFAFVPIWIRASKMPLCMMNKAIGRAIGG 122
Query: 63 MIGE 66
+GE
Sbjct: 123 EVGE 126
>gi|357510715|ref|XP_003625646.1| hypothetical protein MTR_7g101400 [Medicago truncatula]
gi|355500661|gb|AES81864.1| hypothetical protein MTR_7g101400 [Medicago truncatula]
Length = 459
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 15/99 (15%)
Query: 41 WIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKG-------------VKINITRPLMRGLT 87
WIQL LP + S +G +D V I+ ++ + +
Sbjct: 151 WIQLMALPQEYWMEQTLREIASAVGTPLVLDNATLKRLFGHYARILVDIDFSKRIFHEII 210
Query: 88 VQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
V+ EG VEV Y+R+PDFC +GH C +L
Sbjct: 211 VEREGAS--YPVEVVYKRIPDFCSHCQTLGHDVTNCRWL 247
>gi|115473321|ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa Japonica Group]
Length = 1453
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 3 QRRILCTRPWSFNRCLFVLTEPTGIGDFSKQNLNFCSFWIQLHKLPLMSMTKVVGLLFGS 62
+R L PW F + L ++ + + F WI+ K+PL M K +G G
Sbjct: 63 KRHALEDGPWMFGKDLVIVVDYDESKVLEEMVFAFVPIWIRASKMPLCMMNKAIGRAIGG 122
Query: 63 MIGE 66
+GE
Sbjct: 123 EVGE 126
>gi|357493767|ref|XP_003617172.1| hypothetical protein MTR_5g088650 [Medicago truncatula]
gi|355518507|gb|AET00131.1| hypothetical protein MTR_5g088650 [Medicago truncatula]
Length = 442
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGH 118
V +++++ L +TVQ EG E +EV YE+LP +C +IGH
Sbjct: 160 VDVDLSKKLYYSITVQREGFE--FPLEVIYEKLPQYCNMCKQIGH 202
>gi|357496443|ref|XP_003618510.1| hypothetical protein MTR_6g012480 [Medicago truncatula]
gi|355493525|gb|AES74728.1| hypothetical protein MTR_6g012480 [Medicago truncatula]
Length = 253
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 52 MTKVVGLLFGSMIGEVEEVDKGVKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCF 111
M + V + G+ IGE E+ +K +I PL G ++ G E V YE+L FCF
Sbjct: 154 MKEKVRMGLGNYIGEFLELK--LKFDIRHPLKIGNKIKANGVE-WCVVNFKYEKLGTFCF 210
Query: 112 QRGRIGHVFREC 123
G +GH +C
Sbjct: 211 VCGVLGHSETKC 222
>gi|406701912|gb|EKD05004.1| hypothetical protein A1Q2_00703 [Trichosporon asahii var. asahii
CBS 8904]
Length = 420
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 41 WIQLHKLPLMSMTKVVGLLFGSMIGEVEEVDKGVKIN-ITRPLMRGLTVQLEGEENLSTV 99
W+ P + + ++G++ G VE V +G +N ++ P++ GL V +
Sbjct: 70 WLDRLLAPFVLLAMIIGVVIGKFAKNVEVVLQGASLNGVSIPIVVGLLVMMWP----ILT 125
Query: 100 EVYYERLPDFCFQRGRIGHVFRE 122
+V YERLP Q R GH++R+
Sbjct: 126 KVQYERLP----QMLRKGHIWRQ 144
>gi|222636901|gb|EEE67033.1| hypothetical protein OsJ_23970 [Oryza sativa Japonica Group]
Length = 582
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 100 EVYYERLPDFCFQRGRIGHVFREC 123
+V YER+P FCF G IGH +EC
Sbjct: 325 DVRYERIPYFCFMCGYIGHSDKEC 348
>gi|22327249|ref|NP_680290.1| Zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
gi|332006504|gb|AED93887.1| Zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
Length = 457
Score = 35.4 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 48/129 (37%), Gaps = 20/129 (15%)
Query: 19 FVLTEPTGIGDFSKQNLNFCSFWIQLHKLP--LMSMTKVVGLLFGSMIGEVEEVDKG--- 73
F P G Q L W L +P L S+ + + S IGE +K
Sbjct: 212 FSKYSPMGESPLEPQELQTAQTWAILKNVPPQLYSLEGIS--VIASGIGEPLHTEKSRLG 269
Query: 74 ----------VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFREC 123
V N+ PL + V+ + + N + V V Y R P C GR GH+ C
Sbjct: 270 PVNIGRTKVKVVTNLGTPLPDSIVVR-DVQGNTARVAVTYPRPPPKCLNCGRYGHLLSRC 328
Query: 124 --PYLKSSP 130
P +K P
Sbjct: 329 SKPLMKKLP 337
>gi|357517505|ref|XP_003629041.1| hypothetical protein MTR_8g072470 [Medicago truncatula]
gi|355523063|gb|AET03517.1| hypothetical protein MTR_8g072470 [Medicago truncatula]
Length = 340
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYL 126
V +++++ L + V+ EG N +EV YER P FC IGH C L
Sbjct: 164 VDVDLSKKLFNSVLVEREG--NAFPMEVQYERQPLFCSHCKHIGHAILNCNKL 214
>gi|255557287|ref|XP_002519674.1| conserved hypothetical protein [Ricinus communis]
gi|223541091|gb|EEF42647.1| conserved hypothetical protein [Ricinus communis]
Length = 440
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 14/66 (21%)
Query: 36 NFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEVEEVD--------------KGVKINITRP 81
+ SFWIQ+H LPL MT + G + +EEVD V + + +P
Sbjct: 73 SITSFWIQIHGLPLNQMTLENAKMIGGLFEGLEEVDLTPDNQICWNSYMRLKVAVRVDKP 132
Query: 82 LMRGLT 87
L+ G +
Sbjct: 133 LLEGFS 138
>gi|357461341|ref|XP_003600952.1| hypothetical protein MTR_3g071380 [Medicago truncatula]
gi|355490000|gb|AES71203.1| hypothetical protein MTR_3g071380 [Medicago truncatula]
Length = 477
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 23/112 (20%)
Query: 33 QNLNFCSFWIQLHKLP--------LMSMTKVVGL-----------LFGSMIGEVEEVDKG 73
QN + W++LH LP ++ VG + G+ V
Sbjct: 168 QNNSTAQVWVRLHGLPQEYWRPRIFFAIANSVGTPICTDSASTKPMIDRTFGQYARVL-- 225
Query: 74 VKINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHVFRECPY 125
V ++IT+ L + V+ +G VE+ YE LPD+C +IGH C +
Sbjct: 226 VDMDITKDLRYNVLVERKGYAFF--VELEYENLPDYCVHCKKIGHDVEICRF 275
>gi|28207066|gb|AAO37173.1| hypothetical protein [Arabidopsis thaliana]
gi|55740555|gb|AAV63870.1| hypothetical protein At2g06820 [Arabidopsis thaliana]
Length = 169
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 36 NFCSFWIQLHKLPLMSMTKVVGLLFGSMIGEV---EEVDKGVKINIT----RPLMRGLTV 88
+ SFWI+L LP + +GEV E VKI + +PL++ V
Sbjct: 17 SLISFWIELQGLPKHFWKPKMLQAIREELGEVMTKEITSSSVKIKVLLDGLQPLIKETIV 76
Query: 89 QLE--GEENLSTVEVYYERLPDFCFQRGRIGHVFRECPYLKSSPTN 132
GE + V + Y+ L + C R+ H + CP ++S+P +
Sbjct: 77 DFPNGGE---AVVYLDYKNLKNHCLHCQRLSHEKKNCPRVQSAPVS 119
>gi|124360723|gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
Length = 814
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 29 DFSKQNLNFCSFWIQLHKLPLM-----SMTKVVGLLFGSMIGEVEEVDKG---------V 74
DF K+ L WIQL LPL S+++ +G G+ + E K V
Sbjct: 346 DFQKEILKVVPLWIQLPNLPLTCWGLDSLSR-IGSTLGNPLFADECTSKQSRISYARLLV 404
Query: 75 KINITRPLMRGLTVQLEGEENLSTVEVYYERLPDFCFQRGRIGHV 119
+I++TRPL+ + V+ + + Y+ P FC + ++ HV
Sbjct: 405 EIDVTRPLLYKVMVESPDGKCFEQ-RIVYDWEPSFCKKCQQVDHV 448
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.144 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,127,544,121
Number of Sequences: 23463169
Number of extensions: 79290659
Number of successful extensions: 238626
Number of sequences better than 100.0: 177
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 238409
Number of HSP's gapped (non-prelim): 180
length of query: 137
length of database: 8,064,228,071
effective HSP length: 102
effective length of query: 35
effective length of database: 9,965,952,129
effective search space: 348808324515
effective search space used: 348808324515
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)