Query 046240
Match_columns 763
No_of_seqs 655 out of 5431
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 17:37:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-52 4.7E-57 436.6 17.0 260 475-757 13-291 (299)
2 4aoj_A High affinity nerve gro 100.0 1E-51 3.5E-56 436.1 21.6 261 475-758 41-322 (329)
3 3omv_A RAF proto-oncogene seri 100.0 1.3E-51 4.4E-56 429.1 19.5 260 474-754 35-299 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 5.4E-52 1.9E-56 434.0 15.0 255 476-753 27-304 (308)
5 3hmm_A TGF-beta receptor type- 100.0 1.7E-50 5.8E-55 423.9 18.2 280 475-758 3-300 (303)
6 4fih_A Serine/threonine-protei 100.0 2.6E-50 8.8E-55 424.4 15.8 249 475-748 74-323 (346)
7 4b9d_A Serine/threonine-protei 100.0 1E-49 3.5E-54 420.5 18.1 249 475-748 24-276 (350)
8 4ase_A Vascular endothelial gr 100.0 4.3E-50 1.5E-54 427.1 14.7 268 471-760 60-352 (353)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.4E-49 4.8E-54 412.5 16.3 248 475-747 32-283 (311)
10 4g3f_A NF-kappa-beta-inducing 100.0 9E-50 3.1E-54 419.1 12.8 256 474-756 57-317 (336)
11 4fie_A Serine/threonine-protei 100.0 4E-49 1.4E-53 425.5 16.2 249 475-748 151-400 (423)
12 3fpq_A Serine/threonine-protei 100.0 2.2E-48 7.5E-53 401.9 19.3 244 478-748 29-282 (290)
13 3hyh_A Carbon catabolite-derep 100.0 4.6E-48 1.6E-52 395.8 19.1 245 475-748 13-262 (275)
14 4g31_A Eukaryotic translation 100.0 5.7E-47 2E-51 395.0 20.7 249 475-748 5-279 (299)
15 3ubd_A Ribosomal protein S6 ki 100.0 3.9E-48 1.3E-52 401.8 11.0 242 475-743 24-271 (304)
16 1ogq_A PGIP-2, polygalacturona 100.0 2.8E-44 9.6E-49 380.2 23.6 303 30-404 2-312 (313)
17 4b99_A Mitogen-activated prote 100.0 2E-44 6.7E-49 390.3 20.4 268 475-748 54-344 (398)
18 4f9c_A Cell division cycle 7-r 100.0 5.9E-44 2E-48 382.5 19.7 268 472-748 18-352 (361)
19 3uto_A Twitchin; kinase, muscl 100.0 1.8E-43 6.2E-48 401.7 20.1 251 475-748 157-410 (573)
20 3rgz_A Protein brassinosteroid 100.0 2.6E-43 8.8E-48 418.4 21.4 322 27-374 5-360 (768)
21 4eco_A Uncharacterized protein 100.0 3.4E-43 1.1E-47 408.0 21.6 349 31-397 27-504 (636)
22 3v5w_A G-protein coupled recep 100.0 2.3E-42 8E-47 388.9 20.5 247 475-747 189-448 (689)
23 3uim_A Brassinosteroid insensi 100.0 1.9E-42 6.6E-47 369.0 18.2 290 462-758 17-314 (326)
24 2qkw_B Protein kinase; three-h 100.0 2E-42 6.8E-47 368.0 17.7 286 463-757 27-317 (321)
25 3soc_A Activin receptor type-2 100.0 3.6E-42 1.2E-46 366.0 18.4 276 474-756 23-319 (322)
26 3rgz_A Protein brassinosteroid 100.0 1E-41 3.6E-46 404.6 23.2 321 77-408 343-752 (768)
27 2psq_A Fibroblast growth facto 100.0 3.7E-41 1.3E-45 364.9 22.3 262 474-758 80-367 (370)
28 3fxz_A Serine/threonine-protei 100.0 2.1E-41 7.3E-46 355.6 19.1 250 474-748 19-269 (297)
29 3s95_A LIMK-1, LIM domain kina 100.0 6.3E-41 2.2E-45 354.6 22.4 261 474-755 9-282 (310)
30 4ecn_A Leucine-rich repeat pro 100.0 4.5E-41 1.6E-45 396.5 22.3 341 30-393 265-741 (876)
31 3kul_A Ephrin type-A receptor 100.0 6.1E-41 2.1E-45 356.8 20.3 261 474-757 48-315 (325)
32 2nru_A Interleukin-1 receptor- 100.0 1.5E-40 5.1E-45 351.2 22.4 282 461-755 11-306 (307)
33 3ugc_A Tyrosine-protein kinase 100.0 3.2E-41 1.1E-45 354.2 15.9 274 474-756 9-292 (295)
34 3p86_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 350.9 21.2 260 473-757 35-300 (309)
35 3cbl_A C-FES, proto-oncogene t 100.0 8.3E-42 2.8E-46 371.2 11.4 259 474-755 113-374 (377)
36 2c30_A Serine/threonine-protei 100.0 1E-40 3.4E-45 354.5 19.4 262 462-748 22-294 (321)
37 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.3E-40 4.3E-45 344.4 19.7 259 474-757 7-266 (268)
38 4hcu_A Tyrosine-protein kinase 100.0 9.3E-41 3.2E-45 345.7 17.9 258 474-756 9-267 (269)
39 2qol_A Ephrin receptor; recept 100.0 1.2E-40 4E-45 361.2 19.4 260 474-756 44-310 (373)
40 3fe3_A MAP/microtubule affinit 100.0 1.8E-40 6.2E-45 352.9 19.8 247 474-748 14-264 (328)
41 3v47_A TOLL-like receptor 5B a 100.0 2.5E-40 8.6E-45 369.6 21.6 323 63-398 6-413 (455)
42 1tki_A Titin; serine kinase, m 100.0 2.2E-40 7.6E-45 351.6 19.8 251 474-748 4-257 (321)
43 4eqm_A Protein kinase; transfe 100.0 1.7E-40 5.9E-45 348.3 18.7 263 474-757 10-277 (294)
44 1rjb_A FL cytokine receptor; k 100.0 2.4E-40 8.1E-45 355.6 19.8 269 473-763 43-342 (344)
45 3vhe_A Vascular endothelial gr 100.0 1.4E-40 4.8E-45 359.6 17.5 270 465-756 12-356 (359)
46 3gen_A Tyrosine-protein kinase 100.0 1.8E-40 6.3E-45 346.1 17.6 259 474-757 23-282 (283)
47 3tt0_A Basic fibroblast growth 100.0 5E-40 1.7E-44 358.0 21.6 261 474-757 68-354 (382)
48 3op5_A Serine/threonine-protei 100.0 3.2E-40 1.1E-44 357.3 19.8 270 474-757 34-331 (364)
49 3q4u_A Activin receptor type-1 100.0 4.2E-40 1.4E-44 346.6 19.8 265 474-753 7-300 (301)
50 3zgw_A Maternal embryonic leuc 100.0 2.1E-40 7.3E-45 354.4 17.5 250 473-748 8-260 (347)
51 1luf_A Muscle-specific tyrosin 100.0 3.3E-40 1.1E-44 354.3 18.8 262 473-757 45-337 (343)
52 1t46_A HOMO sapiens V-KIT hard 100.0 5.3E-40 1.8E-44 347.9 19.8 264 474-759 22-311 (313)
53 2yab_A Death-associated protei 100.0 6.6E-40 2.2E-44 352.8 20.7 251 474-748 11-272 (361)
54 3tki_A Serine/threonine-protei 100.0 1.9E-40 6.5E-45 352.6 16.1 253 474-748 6-261 (323)
55 3l9p_A Anaplastic lymphoma kin 100.0 2.3E-40 7.8E-45 358.4 16.6 260 474-756 70-346 (367)
56 3c0i_A Peripheral plasma membr 100.0 7.6E-40 2.6E-44 352.2 20.3 253 473-748 22-286 (351)
57 3niz_A Rhodanese family protei 100.0 1.2E-39 4.3E-44 344.5 21.3 269 474-748 20-300 (311)
58 2ivs_A Proto-oncogene tyrosine 100.0 7.3E-40 2.5E-44 347.0 19.5 260 474-756 22-312 (314)
59 3poz_A Epidermal growth factor 100.0 3.6E-40 1.2E-44 351.3 17.2 259 474-756 14-279 (327)
60 3lb7_A RAF proto-oncogene seri 100.0 6.6E-40 2.3E-44 345.9 18.9 262 474-756 35-301 (307)
61 2y0a_A Death-associated protei 100.0 1.3E-39 4.3E-44 346.8 21.3 252 473-748 9-271 (326)
62 1o6l_A RAC-beta serine/threoni 100.0 2E-39 6.7E-44 345.9 22.4 247 475-748 5-260 (337)
63 4e5w_A Tyrosine-protein kinase 100.0 6E-40 2.1E-44 345.6 18.0 272 474-754 20-301 (302)
64 3lxl_A Tyrosine-protein kinase 100.0 6.5E-40 2.2E-44 349.5 18.3 275 474-756 22-304 (327)
65 3soa_A Calcium/calmodulin-depe 100.0 1.5E-39 5.2E-44 359.2 21.3 254 472-748 8-267 (444)
66 1kob_A Twitchin; kinase, intra 100.0 8.2E-40 2.8E-44 355.3 18.8 252 474-748 50-304 (387)
67 2pvf_A Fibroblast growth facto 100.0 1.4E-39 4.9E-44 347.9 20.4 264 474-760 34-323 (334)
68 3og7_A AKAP9-BRAF fusion prote 100.0 3.3E-40 1.1E-44 345.3 14.4 262 474-756 23-289 (289)
69 3mdy_A Bone morphogenetic prot 100.0 3.8E-39 1.3E-43 345.1 22.8 287 466-758 28-334 (337)
70 1csn_A Casein kinase-1; phosph 100.0 1.1E-39 3.7E-44 342.9 18.1 265 474-757 9-285 (298)
71 2x4f_A Myosin light chain kina 100.0 1.1E-39 3.9E-44 353.2 18.6 249 477-748 91-342 (373)
72 2bdw_A Hypothetical protein K1 100.0 1.8E-39 6.1E-44 350.4 20.0 253 472-748 26-284 (362)
73 2izr_A Casein kinase I isoform 100.0 7.4E-40 2.5E-44 349.5 16.8 264 474-757 8-283 (330)
74 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-39 5.3E-44 343.2 19.0 255 474-756 7-264 (307)
75 1mp8_A Focal adhesion kinase 1 100.0 9.9E-40 3.4E-44 340.2 17.2 259 474-757 14-278 (281)
76 3lxp_A Non-receptor tyrosine-p 100.0 1.7E-39 5.7E-44 344.9 19.0 271 475-756 30-311 (318)
77 3qup_A Tyrosine-protein kinase 100.0 9E-40 3.1E-44 347.8 16.7 262 473-757 21-300 (323)
78 3t9t_A Tyrosine-protein kinase 100.0 1.4E-39 4.7E-44 336.4 17.0 258 474-756 7-265 (267)
79 4euu_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 343.5 19.7 276 474-755 8-309 (319)
80 3qd2_B Eukaryotic translation 100.0 5.4E-39 1.9E-43 343.0 21.6 251 473-748 4-325 (332)
81 1qcf_A Haematopoetic cell kina 100.0 1.4E-39 4.9E-44 362.4 17.4 259 473-757 186-446 (454)
82 3txo_A PKC-L, NPKC-ETA, protei 100.0 2E-39 6.7E-44 348.2 17.7 243 474-743 22-269 (353)
83 1fot_A TPK1 delta, CAMP-depend 100.0 8.9E-39 3E-43 338.3 22.5 244 475-748 6-258 (318)
84 2i1m_A Macrophage colony-stimu 100.0 1.2E-39 4E-44 348.5 15.9 263 472-756 43-327 (333)
85 1p4o_A Insulin-like growth fac 100.0 8.7E-40 3E-44 347.8 14.8 267 468-757 18-301 (322)
86 4fvq_A Tyrosine-protein kinase 100.0 1.7E-39 5.7E-44 339.9 16.6 253 474-757 7-277 (289)
87 2zv2_A Calcium/calmodulin-depe 100.0 5.4E-39 1.9E-43 337.7 20.5 248 475-748 13-292 (298)
88 1opk_A P150, C-ABL, proto-onco 100.0 2.5E-39 8.5E-44 363.9 19.0 259 474-757 219-480 (495)
89 4f0f_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44 338.7 17.1 253 474-753 18-287 (287)
90 3kex_A Receptor tyrosine-prote 100.0 7.8E-40 2.7E-44 348.5 13.8 258 475-756 13-277 (325)
91 3kmu_A ILK, integrin-linked ki 100.0 3.3E-39 1.1E-43 334.1 17.7 252 474-755 9-270 (271)
92 3kn6_A Ribosomal protein S6 ki 100.0 3.9E-39 1.3E-43 342.8 18.6 250 480-748 16-270 (325)
93 2xir_A Vascular endothelial gr 100.0 2.8E-39 9.7E-44 342.8 17.5 269 466-757 18-312 (316)
94 1ob3_A PFPK5, cell division co 100.0 2.3E-39 7.8E-44 338.8 16.5 268 475-748 2-280 (288)
95 3gxj_A TGF-beta receptor type- 100.0 6.5E-41 2.2E-45 353.1 4.6 279 474-759 2-301 (303)
96 3hko_A Calcium/calmodulin-depe 100.0 4.8E-39 1.6E-43 345.6 19.1 261 468-748 19-330 (345)
97 3dtc_A Mitogen-activated prote 100.0 4.8E-39 1.6E-43 333.1 18.3 253 475-753 7-271 (271)
98 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-39 7.3E-44 360.4 16.6 252 474-756 192-446 (450)
99 3f3z_A Calcium/calmodulin-depe 100.0 8.8E-39 3E-43 332.3 20.2 259 473-756 7-271 (277)
100 3f66_A Hepatocyte growth facto 100.0 8.2E-39 2.8E-43 336.3 20.0 266 474-762 24-298 (298)
101 4aw2_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 358.5 14.2 259 469-748 68-338 (437)
102 3o0g_A Cell division protein k 100.0 5.7E-39 2E-43 336.5 18.6 267 475-748 2-282 (292)
103 4dc2_A Protein kinase C IOTA t 100.0 7.9E-39 2.7E-43 347.5 20.3 252 474-743 51-307 (396)
104 2v62_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 346.3 17.5 269 474-760 36-333 (345)
105 3ork_A Serine/threonine protei 100.0 8.6E-40 2.9E-44 346.0 12.4 259 474-753 11-279 (311)
106 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-39 4.2E-44 362.6 14.0 258 474-757 183-442 (452)
107 4fr4_A YANK1, serine/threonine 100.0 1.7E-38 5.8E-43 343.7 22.6 249 475-748 15-271 (384)
108 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.4E-39 4.8E-44 346.7 13.7 245 475-748 9-258 (336)
109 1b6c_B TGF-B superfamily recep 100.0 1.7E-38 5.8E-43 340.8 22.1 280 464-759 31-340 (342)
110 1u59_A Tyrosine-protein kinase 100.0 9.5E-39 3.2E-43 333.9 19.5 259 475-757 9-274 (287)
111 1xjd_A Protein kinase C, theta 100.0 4E-39 1.4E-43 344.4 17.0 248 473-747 15-268 (345)
112 3p1a_A MYT1 kinase, membrane-a 100.0 9E-39 3.1E-43 338.0 19.5 246 473-748 55-304 (311)
113 3v8s_A RHO-associated protein 100.0 1.2E-39 4E-44 355.9 13.1 255 470-748 64-329 (410)
114 1mqb_A Ephrin type-A receptor 100.0 1.3E-38 4.5E-43 340.1 20.8 260 475-757 44-311 (333)
115 3gni_B Strad alpha; kinase fol 100.0 9.7E-39 3.3E-43 349.0 20.2 271 474-748 24-333 (389)
116 3a62_A Ribosomal protein S6 ki 100.0 1.1E-38 3.9E-43 339.6 20.2 248 474-748 16-276 (327)
117 2a2a_A Death-associated protei 100.0 1.3E-38 4.6E-43 338.4 20.6 252 473-748 10-272 (321)
118 3lzb_A Epidermal growth factor 100.0 3E-39 1E-43 344.1 15.6 259 474-756 14-279 (327)
119 3brb_A Proto-oncogene tyrosine 100.0 1.2E-38 4.2E-43 337.5 20.0 267 469-758 28-311 (313)
120 3pls_A Macrophage-stimulating 100.0 1.4E-38 4.7E-43 334.5 20.3 264 475-760 21-292 (298)
121 2w4o_A Calcium/calmodulin-depe 100.0 4.8E-39 1.6E-43 345.5 17.0 251 473-748 51-305 (349)
122 3dbq_A Dual specificity protei 100.0 2.5E-39 8.5E-44 347.3 14.7 251 474-748 8-273 (343)
123 1u5q_A Serine/threonine protei 100.0 1E-38 3.5E-43 342.5 19.3 246 474-748 53-305 (348)
124 2h34_A Serine/threonine-protei 100.0 7.1E-39 2.4E-43 338.6 17.7 261 474-757 33-298 (309)
125 3cc6_A Protein tyrosine kinase 100.0 6.9E-39 2.4E-43 333.9 17.3 259 474-757 11-275 (281)
126 3a8x_A Protein kinase C IOTA t 100.0 2.1E-38 7.2E-43 339.5 21.4 251 475-743 9-264 (345)
127 2yex_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 331.2 18.7 254 473-748 5-261 (276)
128 2w1i_A JAK2; chromosomal rearr 100.0 6.8E-39 2.3E-43 341.5 17.4 270 474-755 40-322 (326)
129 3c1x_A Hepatocyte growth facto 100.0 4.7E-39 1.6E-43 348.2 16.4 264 475-762 89-362 (373)
130 2pmi_A Negative RE, cyclin-dep 100.0 1.1E-38 3.8E-43 338.3 18.8 259 474-748 4-293 (317)
131 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.1E-38 7.1E-43 340.0 21.0 244 475-748 41-293 (350)
132 3kk8_A Calcium/calmodulin depe 100.0 1.7E-38 5.9E-43 331.3 19.4 251 474-748 5-261 (284)
133 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.8E-39 2.7E-43 346.6 17.4 254 473-757 63-341 (365)
134 3kfa_A Tyrosine-protein kinase 100.0 4E-39 1.4E-43 336.9 14.6 260 473-757 11-273 (288)
135 2vd5_A DMPK protein; serine/th 100.0 3.5E-39 1.2E-43 352.5 14.5 258 469-748 55-327 (412)
136 3cok_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 331.2 18.0 248 475-748 11-262 (278)
137 3g2f_A Bone morphogenetic prot 100.0 3.8E-39 1.3E-43 345.0 14.3 276 474-756 12-319 (336)
138 2zmd_A Dual specificity protei 100.0 6.7E-39 2.3E-43 349.5 16.5 250 475-748 56-320 (390)
139 2buj_A Serine/threonine-protei 100.0 8.3E-39 2.8E-43 339.4 16.7 265 474-759 28-310 (317)
140 2y94_A 5'-AMP-activated protei 100.0 4.7E-38 1.6E-42 349.5 23.4 246 475-748 16-266 (476)
141 1qpc_A LCK kinase; alpha beta 100.0 1.7E-38 5.8E-43 330.6 18.5 257 474-756 12-270 (279)
142 4eut_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 351.8 15.1 278 474-757 8-311 (396)
143 2i0e_A Protein kinase C-beta I 100.0 1.8E-38 6.2E-43 340.5 18.6 243 474-743 19-266 (353)
144 4hgt_A Casein kinase I isoform 100.0 1.4E-38 4.7E-43 334.1 17.2 266 473-757 7-282 (296)
145 2yfx_A Tyrosine-protein kinase 100.0 1.7E-38 5.8E-43 338.6 18.1 260 474-756 29-305 (327)
146 2r5t_A Serine/threonine-protei 100.0 1.3E-38 4.3E-43 344.2 17.2 250 474-750 37-291 (373)
147 3bhy_A Death-associated protei 100.0 3.9E-38 1.3E-42 328.5 20.3 258 474-755 4-274 (283)
148 3n9x_A Phosphotransferase; mal 100.0 3.4E-38 1.2E-42 348.9 20.9 270 474-748 25-361 (432)
149 2ac3_A MAP kinase-interacting 100.0 9.1E-39 3.1E-43 339.0 15.4 268 474-748 11-295 (316)
150 4agu_A Cyclin-dependent kinase 100.0 2.4E-38 8.3E-43 334.8 18.5 267 475-748 3-284 (311)
151 3uc3_A Serine/threonine-protei 100.0 2.3E-38 8E-43 341.6 18.6 252 474-748 19-274 (361)
152 3oz6_A Mitogen-activated prote 100.0 9.7E-39 3.3E-43 348.8 15.5 270 472-748 6-328 (388)
153 3fdn_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 325.4 21.6 246 474-748 8-257 (279)
154 2wqm_A Serine/threonine-protei 100.0 1.8E-38 6E-43 335.8 16.9 262 474-757 31-299 (310)
155 2eue_A Carbon catabolite derep 100.0 5.2E-38 1.8E-42 326.1 19.8 245 475-748 13-262 (275)
156 3ttj_A Mitogen-activated prote 100.0 3.8E-38 1.3E-42 350.8 20.0 265 474-748 61-355 (464)
157 3llt_A Serine/threonine kinase 100.0 3.1E-38 1.1E-42 341.3 18.7 277 462-748 22-355 (360)
158 2id5_A Lingo-1, leucine rich r 100.0 5.8E-38 2E-42 352.6 21.6 316 66-397 12-337 (477)
159 1xbb_A Tyrosine-protein kinase 100.0 2.6E-38 8.9E-43 331.3 17.2 260 474-758 15-282 (291)
160 2y7j_A Phosphorylase B kinase 100.0 1E-37 3.5E-42 337.3 22.3 256 469-748 88-359 (365)
161 3uzp_A CKI-delta, CKID, casein 100.0 3.4E-38 1.2E-42 331.2 17.8 265 474-757 8-282 (296)
162 2vgo_A Serine/threonine-protei 100.0 1.6E-37 5.6E-42 324.0 22.8 251 475-754 14-270 (284)
163 3rp9_A Mitogen-activated prote 100.0 5.3E-38 1.8E-42 350.7 20.3 195 474-673 52-280 (458)
164 2h8h_A Proto-oncogene tyrosine 100.0 5.1E-39 1.8E-43 364.6 12.2 259 473-757 265-525 (535)
165 1cm8_A Phosphorylated MAP kina 100.0 6.3E-38 2.2E-42 339.1 20.0 262 474-748 24-307 (367)
166 2ozo_A Tyrosine-protein kinase 100.0 7.6E-39 2.6E-43 368.4 13.5 257 476-756 336-599 (613)
167 3g33_A Cell division protein k 100.0 2.3E-38 7.8E-43 334.6 16.0 269 473-748 7-296 (308)
168 2jam_A Calcium/calmodulin-depe 100.0 3.5E-38 1.2E-42 332.5 17.3 251 473-748 7-261 (304)
169 3is5_A Calcium-dependent prote 100.0 1.8E-38 6.1E-43 331.4 14.9 250 474-748 21-278 (285)
170 2jii_A Serine/threonine-protei 100.0 8.7E-39 3E-43 344.4 12.7 265 474-757 41-338 (352)
171 1u46_A ACK-1, activated CDC42 100.0 3.3E-38 1.1E-42 330.4 16.6 262 474-758 17-287 (291)
172 3dls_A PAS domain-containing s 100.0 1.8E-38 6.2E-43 339.0 14.8 243 473-749 22-275 (335)
173 4ejn_A RAC-alpha serine/threon 100.0 2.2E-38 7.5E-43 352.3 16.0 248 474-748 147-404 (446)
174 1fvr_A Tyrosine-protein kinase 100.0 1.7E-38 5.8E-43 338.6 14.3 258 475-758 25-303 (327)
175 3nsz_A CK II alpha, casein kin 100.0 7.8E-38 2.7E-42 333.9 19.2 262 474-748 35-319 (330)
176 3i6u_A CDS1, serine/threonine- 100.0 5.3E-38 1.8E-42 345.8 18.4 253 472-748 132-399 (419)
177 3mtl_A Cell division protein k 100.0 1.5E-38 5.1E-43 338.4 13.5 268 475-748 2-281 (324)
178 2acx_A G protein-coupled recep 100.0 7E-38 2.4E-42 352.6 19.6 252 474-748 183-444 (576)
179 2a19_B Interferon-induced, dou 100.0 6.6E-38 2.2E-42 326.8 18.0 250 473-757 9-276 (284)
180 2rku_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 326.2 20.5 248 474-748 14-265 (294)
181 3lm5_A Serine/threonine-protei 100.0 5.1E-38 1.7E-42 334.7 17.4 263 463-748 16-287 (327)
182 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-38 3.7E-43 341.3 12.1 252 473-748 20-277 (342)
183 4aaa_A Cyclin-dependent kinase 100.0 7.1E-38 2.4E-42 334.3 18.0 269 474-748 24-306 (331)
184 1nxk_A MAP kinase-activated pr 100.0 1.1E-37 3.6E-42 341.0 19.4 250 475-748 61-321 (400)
185 2fst_X Mitogen-activated prote 100.0 8.3E-38 2.9E-42 337.8 18.2 263 474-748 28-311 (367)
186 2owb_A Serine/threonine-protei 100.0 1.6E-37 5.4E-42 332.1 20.1 248 474-748 40-291 (335)
187 3pg1_A Mitogen-activated prote 100.0 4.7E-38 1.6E-42 340.2 16.1 275 467-748 14-316 (362)
188 1ua2_A CAK, cell division prot 100.0 5.5E-38 1.9E-42 337.2 16.5 272 472-749 7-292 (346)
189 3mwu_A Calmodulin-domain prote 100.0 1.1E-37 3.8E-42 350.5 19.6 251 473-748 20-276 (486)
190 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.5E-37 8.6E-42 347.4 22.3 246 475-743 185-438 (543)
191 3com_A Serine/threonine-protei 100.0 6.4E-38 2.2E-42 332.1 16.5 251 473-748 27-278 (314)
192 3eqc_A Dual specificity mitoge 100.0 3.7E-38 1.3E-42 340.7 14.8 265 474-748 32-324 (360)
193 2j7t_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 334.6 11.8 252 474-748 18-275 (302)
194 1byg_A CSK, protein (C-termina 100.0 1.6E-38 5.4E-43 330.6 11.4 252 474-756 20-274 (278)
195 3a7i_A MST3 kinase, serine/thr 100.0 2.5E-37 8.4E-42 325.8 20.7 248 474-748 21-270 (303)
196 3mi9_A Cell division protein k 100.0 1.3E-37 4.6E-42 335.1 19.0 271 474-748 16-311 (351)
197 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-37 6.8E-42 323.8 19.7 244 473-748 9-279 (289)
198 3sv0_A Casein kinase I-like; t 100.0 1E-37 3.6E-42 347.3 18.6 265 474-757 6-280 (483)
199 3ll6_A Cyclin G-associated kin 100.0 4.2E-38 1.4E-42 336.9 14.8 257 473-756 26-309 (337)
200 3q5i_A Protein kinase; CDPK, m 100.0 2.2E-37 7.4E-42 349.7 21.3 251 473-748 34-301 (504)
201 2h6d_A 5'-AMP-activated protei 100.0 3.7E-37 1.3E-41 319.8 21.0 246 475-748 11-261 (276)
202 3lij_A Calcium/calmodulin depe 100.0 1.5E-37 5E-42 350.2 18.7 251 473-748 35-291 (494)
203 2wtk_C Serine/threonine-protei 100.0 6.1E-37 2.1E-41 323.1 22.3 251 473-748 3-263 (305)
204 1t4h_A Serine/threonine-protei 100.0 2.8E-37 9.7E-42 323.2 19.4 247 475-748 26-282 (290)
205 2clq_A Mitogen-activated prote 100.0 1.1E-37 3.7E-42 327.2 16.2 250 476-748 23-278 (295)
206 3nyv_A Calmodulin-domain prote 100.0 7E-38 2.4E-42 352.2 15.6 251 473-748 24-281 (484)
207 4fl3_A Tyrosine-protein kinase 100.0 1.2E-37 4E-42 359.3 17.7 251 481-756 375-632 (635)
208 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-37 3.9E-42 332.3 15.9 269 473-748 32-318 (329)
209 1phk_A Phosphorylase kinase; g 100.0 3E-37 1E-41 324.3 18.7 251 474-748 16-283 (298)
210 2w5a_A Serine/threonine-protei 100.0 8.8E-38 3E-42 325.1 14.2 253 474-751 5-270 (279)
211 3fme_A Dual specificity mitoge 100.0 2E-37 7E-42 324.2 16.9 250 474-748 6-266 (290)
212 3qyz_A Mitogen-activated prote 100.0 4.3E-37 1.5E-41 332.7 19.9 269 474-748 26-313 (364)
213 2pml_X PFPK7, Ser/Thr protein 100.0 2.6E-37 8.9E-42 332.4 18.0 264 474-748 30-322 (348)
214 3byv_A Rhoptry kinase; malaria 100.0 1.1E-38 3.8E-43 346.8 7.4 240 474-748 72-359 (377)
215 1vzo_A Ribosomal protein S6 ki 100.0 7.3E-38 2.5E-42 337.3 13.6 253 474-748 53-321 (355)
216 2i6l_A Mitogen-activated prote 100.0 4.6E-37 1.6E-41 326.2 19.7 268 474-748 10-305 (320)
217 2vwi_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 331.2 11.8 261 474-748 14-287 (303)
218 2xrw_A Mitogen-activated prote 100.0 5.3E-37 1.8E-41 332.7 20.1 264 474-748 24-318 (371)
219 2ycf_A Serine/threonine-protei 100.0 2.6E-37 8.9E-42 328.6 17.3 252 473-748 8-274 (322)
220 2b9h_A MAP kinase FUS3, mitoge 100.0 4.9E-37 1.7E-41 331.0 18.8 268 474-748 10-305 (353)
221 1zy4_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41 323.6 18.0 253 473-748 4-283 (303)
222 3cek_A Dual specificity protei 100.0 6.1E-38 2.1E-42 332.1 11.4 259 466-748 19-292 (313)
223 2j0j_A Focal adhesion kinase 1 100.0 3.9E-37 1.3E-41 356.3 18.8 261 472-757 387-653 (656)
224 3pfq_A PKC-B, PKC-beta, protei 100.0 7.3E-37 2.5E-41 355.1 21.0 243 474-743 340-587 (674)
225 3eb0_A Putative uncharacterize 100.0 3.5E-37 1.2E-41 335.8 16.9 266 471-748 3-321 (383)
226 4exu_A Mitogen-activated prote 100.0 9.3E-37 3.2E-41 330.8 20.0 262 474-748 41-323 (371)
227 3an0_A Dual specificity mitoge 100.0 1.3E-37 4.6E-42 333.6 13.0 250 474-748 50-310 (340)
228 3q60_A ROP5B; pseudokinase, tr 100.0 6.2E-38 2.1E-42 340.2 10.0 254 474-748 61-352 (371)
229 2r3i_A Cell division protein k 100.0 4.4E-37 1.5E-41 323.2 15.4 268 475-748 3-283 (299)
230 1wak_A Serine/threonine-protei 100.0 5.4E-37 1.8E-41 336.1 16.7 258 474-748 36-391 (397)
231 2wei_A Calmodulin-domain prote 100.0 8.8E-37 3E-41 319.0 17.0 251 473-748 20-276 (287)
232 3kvw_A DYRK2, dual specificity 100.0 8E-37 2.7E-41 337.3 17.4 198 474-681 96-303 (429)
233 2x7f_A TRAF2 and NCK-interacti 100.0 3.9E-37 1.3E-41 327.9 14.1 255 469-748 18-286 (326)
234 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.5E-37 5E-42 330.1 10.7 260 473-757 31-304 (319)
235 3vq2_A TLR4, TOLL-like recepto 100.0 7.3E-36 2.5E-40 346.0 25.0 162 233-398 399-563 (606)
236 1z57_A Dual specificity protei 100.0 4E-36 1.4E-40 321.7 20.8 264 474-748 13-328 (339)
237 4e7w_A Glycogen synthase kinas 100.0 1.2E-36 4.2E-41 332.3 16.8 263 474-748 39-321 (394)
238 2id5_A Lingo-1, leucine rich r 100.0 2.1E-36 7.3E-41 339.8 18.9 307 75-397 54-360 (477)
239 3coi_A Mitogen-activated prote 100.0 2.8E-36 9.7E-41 325.0 19.1 262 474-748 23-305 (353)
240 2vx3_A Dual specificity tyrosi 100.0 4.1E-36 1.4E-40 327.2 20.2 201 473-681 52-262 (382)
241 3e3p_A Protein kinase, putativ 100.0 3.7E-36 1.3E-40 325.1 19.6 275 468-748 16-314 (360)
242 3rgf_A Cyclin-dependent kinase 100.0 1.2E-36 4E-41 334.2 15.4 200 474-679 19-238 (405)
243 1j1b_A Glycogen synthase kinas 100.0 1.6E-36 5.5E-41 334.1 15.9 262 474-748 53-336 (420)
244 1blx_A Cyclin-dependent kinase 100.0 1.1E-36 3.6E-41 324.5 13.7 268 473-748 9-296 (326)
245 2rio_A Serine/threonine-protei 100.0 4.3E-36 1.5E-40 332.1 19.0 251 475-748 15-295 (434)
246 3t6q_A CD180 antigen; protein- 100.0 1.2E-35 4E-40 344.2 23.5 302 78-397 255-564 (606)
247 3p23_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41 333.7 15.3 250 474-748 23-283 (432)
248 3aln_A Dual specificity mitoge 100.0 1.2E-36 4E-41 324.4 12.8 253 474-748 21-285 (327)
249 2dyl_A Dual specificity mitoge 100.0 3.1E-36 1.1E-40 319.7 15.0 251 474-748 24-283 (318)
250 2eu9_A Dual specificity protei 100.0 1.3E-35 4.6E-40 319.8 20.2 264 474-748 18-333 (355)
251 3fhr_A MAP kinase-activated pr 100.0 2.7E-36 9.2E-41 322.5 14.3 256 474-753 27-294 (336)
252 3o6n_A APL1; leucine-rich repe 100.0 1.5E-35 5.1E-40 323.9 20.3 316 57-397 5-356 (390)
253 3a99_A Proto-oncogene serine/t 100.0 2.5E-36 8.7E-41 320.6 13.7 242 472-748 40-293 (320)
254 2iwi_A Serine/threonine-protei 100.0 2.8E-36 9.5E-41 319.2 13.2 245 469-748 25-283 (312)
255 4fcg_A Uncharacterized protein 100.0 1.6E-35 5.4E-40 315.0 18.9 279 31-370 24-314 (328)
256 1q8y_A SR protein kinase; tran 100.0 1.7E-35 5.8E-40 321.5 18.0 265 474-748 18-333 (373)
257 3v47_A TOLL-like receptor 5B a 100.0 1.5E-35 5E-40 331.0 17.9 285 76-376 53-414 (455)
258 4g8a_A TOLL-like receptor 4; l 100.0 6.2E-35 2.1E-39 339.9 24.0 307 77-397 52-584 (635)
259 3oja_B Anopheles plasmodium-re 100.0 3.3E-35 1.1E-39 338.9 21.2 316 57-397 11-362 (597)
260 2z81_A CD282 antigen, TOLL-lik 100.0 3.9E-35 1.3E-39 335.7 18.6 154 64-230 3-169 (549)
261 3qa8_A MGC80376 protein; kinas 100.0 1.5E-35 5.2E-40 336.5 13.6 273 474-756 13-310 (676)
262 2z63_A TOLL-like receptor 4, v 100.0 2.7E-34 9.3E-39 330.3 22.9 143 253-398 392-536 (570)
263 3j0a_A TOLL-like receptor 5; m 100.0 1.6E-34 5.3E-39 346.5 21.2 95 76-176 72-168 (844)
264 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.2E-34 1.1E-38 328.8 22.6 161 230-397 350-514 (562)
265 3t6q_A CD180 antigen; protein- 100.0 6.2E-34 2.1E-38 329.8 23.9 300 77-391 33-387 (606)
266 1ziw_A TOLL-like receptor 3; i 100.0 3.9E-34 1.3E-38 336.0 22.5 312 78-398 249-627 (680)
267 3uqc_A Probable conserved tran 100.0 9.9E-35 3.4E-39 302.7 14.7 234 474-757 30-267 (286)
268 3j0a_A TOLL-like receptor 5; m 100.0 6.6E-34 2.3E-38 341.1 23.6 293 64-371 13-376 (844)
269 2pzi_A Probable serine/threoni 100.0 1.1E-34 3.6E-39 339.3 16.2 239 474-753 79-326 (681)
270 2z7x_B TOLL-like receptor 1, v 100.0 3.9E-34 1.3E-38 325.1 20.5 298 76-397 44-485 (520)
271 4eco_A Uncharacterized protein 100.0 3.6E-34 1.2E-38 332.2 20.0 296 76-394 248-601 (636)
272 3m2w_A MAP kinase-activated pr 100.0 4.9E-34 1.7E-38 299.9 15.0 229 475-748 17-256 (299)
273 2vuw_A Serine/threonine-protei 100.0 2.3E-34 7.8E-39 307.8 12.2 242 474-747 19-329 (336)
274 3dzo_A Rhoptry kinase domain; 100.0 3.2E-34 1.1E-38 315.0 9.9 238 475-747 78-362 (413)
275 1ziw_A TOLL-like receptor 3; i 100.0 1.1E-32 3.9E-37 323.6 23.2 301 77-391 25-364 (680)
276 2z7x_B TOLL-like receptor 1, v 100.0 8.9E-33 3E-37 313.9 21.3 138 77-232 21-163 (520)
277 1xku_A Decorin; proteoglycan, 100.0 2.1E-32 7.3E-37 291.8 22.6 268 78-371 32-307 (330)
278 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.1E-32 7.1E-37 313.7 23.9 296 77-397 52-489 (562)
279 4ecn_A Leucine-rich repeat pro 100.0 1.3E-32 4.5E-37 324.5 22.7 296 76-392 490-818 (876)
280 1xku_A Decorin; proteoglycan, 100.0 3.2E-32 1.1E-36 290.4 23.6 282 64-368 30-330 (330)
281 2ft3_A Biglycan; proteoglycan, 100.0 1.3E-32 4.4E-37 293.7 20.5 286 78-390 34-330 (332)
282 2z80_A TOLL-like receptor 2, v 100.0 2.6E-33 8.9E-38 301.7 14.3 288 58-375 23-319 (353)
283 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-32 9.6E-37 291.0 21.9 281 64-368 32-331 (332)
284 3o6n_A APL1; leucine-rich repe 100.0 2.7E-32 9.1E-37 298.1 18.5 295 77-397 69-378 (390)
285 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-31 4.6E-36 310.2 24.8 161 210-375 400-563 (606)
286 3oja_B Anopheles plasmodium-re 100.0 3.2E-32 1.1E-36 313.9 18.4 295 77-397 75-384 (597)
287 2z63_A TOLL-like receptor 4, v 100.0 8.5E-32 2.9E-36 309.5 20.1 162 210-376 374-537 (570)
288 4fmz_A Internalin; leucine ric 100.0 8E-31 2.7E-35 281.6 23.0 281 76-392 65-345 (347)
289 2z66_A Variable lymphocyte rec 100.0 1.5E-31 5E-36 282.1 15.7 251 65-347 7-262 (306)
290 3zyj_A Leucine-rich repeat-con 100.0 9.2E-31 3.2E-35 290.5 22.8 249 80-373 46-295 (440)
291 2z81_A CD282 antigen, TOLL-lik 100.0 4.4E-31 1.5E-35 302.1 16.8 293 82-391 10-421 (549)
292 3zyi_A Leucine-rich repeat-con 100.0 2.1E-30 7.1E-35 288.7 21.4 249 80-373 57-306 (452)
293 4g8a_A TOLL-like receptor 4; l 100.0 2.4E-30 8.3E-35 301.1 22.8 282 77-374 76-584 (635)
294 2z66_A Variable lymphocyte rec 100.0 6.1E-31 2.1E-35 277.3 13.6 274 104-397 10-291 (306)
295 4fmz_A Internalin; leucine ric 100.0 4.5E-30 1.6E-34 275.8 19.9 283 75-394 42-325 (347)
296 1o6v_A Internalin A; bacterial 100.0 6.7E-30 2.3E-34 285.7 21.5 279 76-391 67-364 (466)
297 3oja_A Leucine-rich immune mol 100.0 1.9E-32 6.6E-37 307.0 0.7 235 101-365 34-270 (487)
298 2z80_A TOLL-like receptor 2, v 100.0 1.1E-30 3.6E-35 281.3 14.2 278 101-397 31-318 (353)
299 1ozn_A Reticulon 4 receptor; N 100.0 3.2E-30 1.1E-34 268.8 16.9 262 69-376 5-267 (285)
300 1o6v_A Internalin A; bacterial 100.0 1.5E-29 5.1E-34 282.9 23.5 214 153-392 174-387 (466)
301 3zyi_A Leucine-rich repeat-con 100.0 9.2E-30 3.1E-34 283.5 21.7 230 77-347 75-304 (452)
302 3zyj_A Leucine-rich repeat-con 100.0 1.9E-29 6.5E-34 279.9 22.3 251 103-397 45-296 (440)
303 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-30 5.7E-35 274.5 12.0 229 76-347 75-306 (313)
304 1ozn_A Reticulon 4 receptor; N 100.0 8.8E-30 3E-34 265.5 17.3 251 104-397 14-265 (285)
305 1wwl_A Monocyte differentiatio 100.0 1.7E-31 5.8E-36 282.2 3.1 273 57-371 23-310 (312)
306 4fcg_A Uncharacterized protein 100.0 3.3E-29 1.1E-33 266.2 19.5 277 48-390 26-311 (328)
307 1wwl_A Monocyte differentiatio 100.0 2.5E-31 8.6E-36 280.9 2.5 226 78-347 64-310 (312)
308 3bz5_A Internalin-J, INLJ; leu 100.0 8.2E-29 2.8E-33 275.0 21.8 255 77-374 42-303 (457)
309 3bz5_A Internalin-J, INLJ; leu 100.0 1.4E-28 4.9E-33 273.0 22.5 275 75-392 62-351 (457)
310 3o53_A Protein LRIM1, AGAP0063 100.0 1.9E-30 6.3E-35 274.9 6.8 270 77-376 10-282 (317)
311 3g06_A SSPH2 (leucine-rich rep 100.0 2E-28 6.8E-33 279.9 18.5 283 50-392 8-296 (622)
312 2o6q_A Variable lymphocyte rec 100.0 1.5E-27 5.1E-32 246.4 18.9 218 62-323 2-219 (270)
313 3oja_A Leucine-rich immune mol 100.0 9.5E-29 3.2E-33 277.0 10.3 244 131-397 33-286 (487)
314 4azs_A Methyltransferase WBDD; 100.0 3.3E-29 1.1E-33 284.6 6.2 185 483-677 242-438 (569)
315 3o53_A Protein LRIM1, AGAP0063 99.9 4.3E-29 1.5E-33 264.4 4.7 261 103-393 12-275 (317)
316 1jl5_A Outer protein YOPM; leu 99.9 7E-27 2.4E-31 259.2 21.4 268 77-394 111-410 (454)
317 1jl5_A Outer protein YOPM; leu 99.9 5.4E-26 1.8E-30 252.1 25.3 263 77-392 91-369 (454)
318 2z62_A TOLL-like receptor 4, v 99.9 1.3E-26 4.5E-31 240.2 18.4 210 134-376 30-243 (276)
319 2z62_A TOLL-like receptor 4, v 99.9 8.3E-26 2.8E-30 234.2 17.7 225 82-347 12-238 (276)
320 3g06_A SSPH2 (leucine-rich rep 99.9 2.3E-25 8E-30 254.5 21.7 242 77-375 61-302 (622)
321 2o6q_A Variable lymphocyte rec 99.9 3.8E-25 1.3E-29 228.4 21.2 136 210-373 86-221 (270)
322 1p9a_G Platelet glycoprotein I 99.9 4.5E-25 1.5E-29 229.9 18.2 201 130-370 8-208 (290)
323 1z7x_W Ribonuclease inhibitor; 99.9 3.1E-28 1E-32 272.1 -8.4 279 78-371 29-355 (461)
324 1p9a_G Platelet glycoprotein I 99.9 1.3E-24 4.3E-29 226.5 19.4 205 96-347 5-209 (290)
325 1z7x_W Ribonuclease inhibitor; 99.9 9.6E-28 3.3E-32 268.1 -5.0 283 78-371 86-412 (461)
326 3rfs_A Internalin B, repeat mo 99.9 3.9E-25 1.3E-29 228.5 13.0 209 97-356 37-245 (272)
327 3m19_A Variable lymphocyte rec 99.9 1.4E-24 4.9E-29 221.4 15.7 191 63-299 3-193 (251)
328 2xwt_C Thyrotropin receptor; s 99.9 1.9E-24 6.5E-29 218.8 15.0 196 102-343 32-236 (239)
329 3en9_A Glycoprotease, O-sialog 99.9 2.4E-25 8.2E-30 251.4 8.6 187 477-678 338-539 (540)
330 3rfs_A Internalin B, repeat mo 99.9 1.9E-24 6.5E-29 223.3 14.3 208 76-334 40-247 (272)
331 2ast_B S-phase kinase-associat 99.9 4.5E-26 1.5E-30 243.4 1.2 263 64-376 36-312 (336)
332 3goz_A Leucine-rich repeat-con 99.9 7E-26 2.4E-30 244.4 1.5 253 81-348 2-299 (362)
333 2xwt_C Thyrotropin receptor; s 99.9 9.6E-24 3.3E-28 213.7 15.3 201 76-319 30-236 (239)
334 4glp_A Monocyte differentiatio 99.9 2.2E-24 7.4E-29 227.5 9.4 208 131-371 90-308 (310)
335 4glp_A Monocyte differentiatio 99.9 3.6E-24 1.2E-28 225.7 10.7 228 78-347 65-308 (310)
336 4ay9_X Follicle-stimulating ho 99.9 2.9E-23 1E-27 222.7 17.3 150 82-246 14-167 (350)
337 2ca6_A RAN GTPase-activating p 99.9 1.5E-25 5.3E-30 244.1 -1.1 244 92-374 23-320 (386)
338 2ca6_A RAN GTPase-activating p 99.9 8.3E-26 2.8E-30 246.2 -3.9 267 77-366 32-339 (386)
339 3m19_A Variable lymphocyte rec 99.9 1.3E-22 4.4E-27 206.9 19.7 133 212-348 62-194 (251)
340 4ay9_X Follicle-stimulating ho 99.9 7.6E-23 2.6E-27 219.4 17.5 238 65-320 9-257 (350)
341 3goz_A Leucine-rich repeat-con 99.9 4.6E-25 1.6E-29 237.9 0.0 255 105-372 2-299 (362)
342 3cvr_A Invasion plasmid antige 99.9 8.6E-24 3E-28 238.6 10.1 209 57-333 35-254 (571)
343 1h6u_A Internalin H; cell adhe 99.9 1.6E-22 5.5E-27 212.7 15.9 130 229-372 103-232 (308)
344 2o6s_A Variable lymphocyte rec 99.9 2.5E-22 8.5E-27 198.6 14.5 183 64-308 6-188 (208)
345 1h6u_A Internalin H; cell adhe 99.9 3E-22 1E-26 210.6 12.8 63 281-347 169-231 (308)
346 1zar_A RIO2 kinase; serine kin 99.9 4.7E-22 1.6E-26 205.7 10.2 147 473-650 88-252 (282)
347 3cvr_A Invasion plasmid antige 99.9 1.6E-21 5.3E-26 220.2 14.8 189 133-358 60-255 (571)
348 2o6s_A Variable lymphocyte rec 99.9 4.5E-21 1.6E-25 189.5 15.8 181 104-334 10-190 (208)
349 2ast_B S-phase kinase-associat 99.8 1.4E-22 4.7E-27 216.3 2.2 243 102-393 48-306 (336)
350 4b8c_D Glucose-repressible alc 99.8 5.1E-22 1.7E-26 232.5 1.9 227 30-277 128-359 (727)
351 3e6j_A Variable lymphocyte rec 99.8 3.2E-20 1.1E-24 186.1 14.8 162 58-247 12-173 (229)
352 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-20 4E-25 188.0 10.2 157 211-374 13-170 (220)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 5E-20 1.7E-24 183.5 14.6 152 81-246 15-166 (220)
354 1dce_A Protein (RAB geranylger 99.8 1.9E-22 6.6E-27 228.9 -3.5 188 130-348 347-548 (567)
355 2v9t_B SLIT homolog 2 protein 99.8 5.2E-20 1.8E-24 183.4 14.1 151 81-272 15-165 (220)
356 2xot_A Amphoterin-induced prot 99.8 4.2E-20 1.4E-24 198.9 14.5 159 210-372 40-204 (361)
357 1dce_A Protein (RAB geranylger 99.8 2.5E-22 8.6E-27 227.9 -3.5 205 97-340 345-567 (567)
358 2v9t_B SLIT homolog 2 protein 99.8 2E-20 6.9E-25 186.3 10.4 154 212-372 14-167 (220)
359 2xot_A Amphoterin-induced prot 99.8 4.6E-20 1.6E-24 198.5 12.5 182 69-298 15-202 (361)
360 1h6t_A Internalin B; cell adhe 99.8 3.6E-20 1.2E-24 193.0 9.0 192 132-372 24-215 (291)
361 3e6j_A Variable lymphocyte rec 99.8 3.2E-19 1.1E-23 178.9 14.9 157 210-374 20-176 (229)
362 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.6E-24 189.4 11.8 108 229-348 108-215 (291)
363 1m9s_A Internalin B; cell inva 99.8 7.3E-20 2.5E-24 208.9 11.5 169 77-299 43-211 (605)
364 3ogk_B Coronatine-insensitive 99.8 1.4E-21 4.7E-26 225.4 -3.3 66 77-145 164-233 (592)
365 1m9s_A Internalin B; cell inva 99.8 3.8E-20 1.3E-24 211.2 7.6 190 134-348 23-212 (605)
366 3ogk_B Coronatine-insensitive 99.8 4.7E-22 1.6E-26 229.3 -8.8 182 78-267 139-350 (592)
367 3sb4_A Hypothetical leucine ri 99.8 1.9E-19 6.6E-24 191.1 6.4 278 77-364 25-328 (329)
368 1xeu_A Internalin C; cellular 99.8 1E-18 3.6E-23 179.0 10.9 163 191-373 26-188 (263)
369 4ezg_A Putative uncharacterize 99.8 2.6E-18 9E-23 168.0 13.1 154 205-371 41-195 (197)
370 4b8c_D Glucose-repressible alc 99.8 1.3E-19 4.3E-24 212.2 3.5 186 101-327 173-359 (727)
371 1xeu_A Internalin C; cellular 99.8 3E-19 1E-23 183.0 5.5 39 130-170 39-77 (263)
372 1w8a_A SLIT protein; signaling 99.7 1.8E-18 6E-23 168.4 8.7 129 212-347 11-140 (192)
373 4ezg_A Putative uncharacterize 99.7 4.3E-18 1.5E-22 166.4 10.2 150 77-272 44-194 (197)
374 1zth_A RIO1 serine protein kin 99.7 1.9E-18 6.5E-23 176.5 7.4 136 477-625 49-219 (258)
375 1w8a_A SLIT protein; signaling 99.7 1.8E-17 6E-22 161.2 13.6 156 236-397 11-166 (192)
376 2p1m_B Transport inhibitor res 99.7 3.5E-20 1.2E-24 213.7 -7.7 282 77-370 130-469 (594)
377 2p1m_B Transport inhibitor res 99.7 6.3E-20 2.2E-24 211.5 -7.2 298 77-391 105-467 (594)
378 3sb4_A Hypothetical leucine ri 99.7 3.4E-17 1.2E-21 173.8 10.5 243 76-340 48-328 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 3.6E-17 1.2E-21 159.1 8.8 130 236-373 13-142 (193)
380 4fdw_A Leucine rich hypothetic 99.7 5.1E-16 1.8E-20 168.4 17.4 246 99-373 111-361 (401)
381 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.6E-21 150.8 11.1 134 210-373 25-163 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 2.1E-16 7.1E-21 150.1 9.4 134 179-322 23-160 (168)
383 2o6r_A Variable lymphocyte rec 99.6 5.2E-16 1.8E-20 148.8 12.0 112 261-374 30-141 (177)
384 2wfh_A SLIT homolog 2 protein 99.6 4.7E-16 1.6E-20 151.2 11.3 127 80-246 13-139 (193)
385 2je0_A Acidic leucine-rich nuc 99.6 3.4E-16 1.2E-20 145.4 9.1 128 233-366 17-149 (149)
386 4fdw_A Leucine rich hypothetic 99.6 3.6E-15 1.2E-19 161.7 17.6 264 78-370 114-383 (401)
387 2o6r_A Variable lymphocyte rec 99.6 1.1E-15 3.8E-20 146.4 11.4 130 81-249 11-140 (177)
388 2je0_A Acidic leucine-rich nuc 99.6 3.7E-16 1.3E-20 145.1 6.6 127 210-342 18-149 (149)
389 4gyi_A RIO2 kinase; protein ki 99.6 4.5E-16 1.5E-20 164.8 6.4 137 477-625 97-265 (397)
390 1a9n_A U2A', U2A'; complex (nu 99.6 5.3E-15 1.8E-19 141.5 9.6 134 229-370 15-153 (176)
391 1ds9_A Outer arm dynein; leuci 99.6 8E-17 2.7E-21 157.5 -4.0 151 210-371 19-186 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.5 3.6E-15 1.2E-19 142.7 5.9 37 133-171 43-79 (176)
393 3g39_A Variable lymphocyte rec 99.5 2.6E-14 8.8E-19 135.7 10.5 108 262-374 12-119 (170)
394 1ds9_A Outer arm dynein; leuci 99.5 2E-16 6.8E-21 154.7 -5.1 162 152-347 14-186 (198)
395 2r9u_A Variable lymphocyte rec 99.5 5.9E-14 2E-18 133.7 10.5 89 285-373 33-121 (174)
396 3g39_A Variable lymphocyte rec 99.5 1.2E-13 4.3E-18 131.0 11.1 48 133-180 31-78 (170)
397 2r9u_A Variable lymphocyte rec 99.5 1.9E-13 6.6E-18 130.2 10.8 48 133-180 34-81 (174)
398 4fs7_A Uncharacterized protein 99.4 1.9E-12 6.6E-17 140.7 18.0 264 76-367 70-376 (394)
399 3un9_A NLR family member X1; l 99.3 2.5E-14 8.5E-19 153.6 -5.2 93 261-355 157-261 (372)
400 2ifg_A High affinity nerve gro 99.3 1.5E-12 5.1E-17 139.0 7.5 133 236-375 11-146 (347)
401 2ifg_A High affinity nerve gro 99.3 5.9E-12 2E-16 134.3 11.6 90 281-371 27-117 (347)
402 3un9_A NLR family member X1; l 99.3 1.4E-13 4.7E-18 147.8 -1.4 158 210-371 73-253 (372)
403 4gt6_A Cell surface protein; l 99.3 1E-10 3.6E-15 126.9 18.8 265 78-368 65-368 (394)
404 4fs7_A Uncharacterized protein 99.2 4.6E-11 1.6E-15 129.7 14.7 255 88-367 58-353 (394)
405 3tm0_A Aminoglycoside 3'-phosp 99.2 4.2E-11 1.4E-15 122.3 12.7 147 471-624 10-213 (263)
406 4gt6_A Cell surface protein; l 99.1 4.1E-10 1.4E-14 122.2 15.9 265 77-370 87-391 (394)
407 1nd4_A Aminoglycoside 3'-phosp 99.1 1.3E-10 4.5E-15 118.3 9.8 129 484-624 29-214 (264)
408 4h09_A Hypothetical leucine ri 99.0 1.5E-08 5.2E-13 109.2 18.4 261 77-365 46-341 (379)
409 2ra8_A Uncharacterized protein 98.9 3.4E-10 1.1E-14 120.4 4.2 211 131-368 106-341 (362)
410 3dxp_A Putative acyl-COA dehyd 98.9 7.8E-09 2.7E-13 110.6 11.4 142 479-624 42-248 (359)
411 2ra8_A Uncharacterized protein 98.8 7.2E-10 2.5E-14 117.8 1.8 206 100-344 106-341 (362)
412 3rw6_A Nuclear RNA export fact 98.8 1.9E-11 6.6E-16 123.2 -10.0 24 63-86 76-99 (267)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 4.3E-09 1.5E-13 109.8 7.5 185 480-679 25-289 (304)
414 4h09_A Hypothetical leucine ri 98.8 9.6E-08 3.3E-12 102.8 18.2 257 77-357 69-356 (379)
415 3r70_A Aminoglycoside phosphot 98.5 7.7E-07 2.6E-11 93.3 13.4 137 476-625 38-238 (320)
416 3rw6_A Nuclear RNA export fact 98.4 3.1E-08 1.1E-12 99.7 -0.3 79 283-363 168-257 (267)
417 1io0_A Tropomodulin; LRR prote 98.4 6.6E-08 2.3E-12 92.6 1.2 62 309-370 93-164 (185)
418 4gkh_A Aminoglycoside 3'-phosp 98.4 2.9E-06 9.8E-11 86.5 13.6 135 482-624 31-223 (272)
419 3tdw_A Gentamicin resistance p 98.3 4.3E-06 1.5E-10 86.9 14.1 136 480-624 24-224 (306)
420 3d1u_A Putative fructosamine-3 98.3 2.4E-06 8.1E-11 87.8 11.7 76 479-558 19-97 (288)
421 1io0_A Tropomodulin; LRR prote 98.2 9.8E-08 3.4E-12 91.4 -0.8 66 282-347 90-165 (185)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 8.3E-06 2.9E-10 86.8 11.9 141 479-625 45-244 (362)
423 3ats_A Putative uncharacterize 98.1 6E-06 2E-10 87.9 9.3 81 480-560 25-122 (357)
424 3e4g_A ATP synthase subunit S, 97.9 7E-06 2.4E-10 76.6 4.1 81 287-367 63-149 (176)
425 2olc_A MTR kinase, methylthior 97.8 5.8E-05 2E-09 81.5 9.8 75 480-556 35-120 (397)
426 2q83_A YTAA protein; 2635576, 97.8 0.00014 4.8E-09 76.6 12.5 139 481-624 38-252 (346)
427 3jr1_A Putative fructosamine-3 97.7 0.00024 8.1E-09 73.5 13.2 75 480-558 41-118 (312)
428 3f7w_A Putative fructosamine-3 97.7 7.6E-05 2.6E-09 76.7 8.1 79 476-558 16-97 (288)
429 3e4g_A ATP synthase subunit S, 97.6 1.8E-05 6E-10 73.8 2.1 85 261-347 63-154 (176)
430 2pyw_A Uncharacterized protein 97.4 0.0003 1E-08 76.4 8.6 79 592-674 230-313 (420)
431 2ppq_A HSK, HK, homoserine kin 97.3 0.00068 2.3E-08 70.6 10.5 157 465-624 7-217 (322)
432 3rfe_A Platelet glycoprotein I 97.1 0.00065 2.2E-08 60.2 6.0 56 313-370 12-68 (130)
433 3csv_A Aminoglycoside phosphot 97.0 0.0017 5.8E-08 68.0 9.9 139 481-624 24-217 (333)
434 1zyl_A Hypothetical protein YI 97.0 0.0045 1.5E-07 64.5 12.8 156 465-624 11-223 (328)
435 3dxq_A Choline/ethanolamine ki 97.0 0.0017 5.8E-08 66.9 9.3 71 480-558 23-95 (301)
436 3feg_A Choline/ethanolamine ki 97.0 0.0019 6.6E-08 68.5 9.8 140 480-624 55-254 (379)
437 3rfe_A Platelet glycoprotein I 97.0 0.00098 3.4E-08 59.0 6.1 36 134-169 33-68 (130)
438 1nw1_A Choline kinase (49.2 KD 96.9 0.0021 7.1E-08 69.8 8.9 73 480-558 78-159 (429)
439 1pgv_A TMD-1, tropomodulin TMD 96.9 0.0003 1E-08 66.7 2.0 83 285-367 70-167 (197)
440 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00018 6.1E-09 68.3 0.1 113 210-346 42-170 (197)
441 2qg7_A Ethanolamine kinase PV0 96.7 0.0047 1.6E-07 67.3 9.9 74 480-558 113-188 (458)
442 3c5i_A Choline kinase; choline 96.6 0.0036 1.2E-07 66.5 8.3 74 480-558 38-121 (369)
443 2yle_A Protein spire homolog 1 96.6 0.022 7.5E-07 54.3 12.4 168 556-757 33-203 (229)
444 3i1a_A Spectinomycin phosphotr 96.3 0.01 3.5E-07 62.1 9.2 31 594-624 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 96.0 0.024 8.2E-07 60.3 10.3 140 481-624 58-280 (401)
446 3mes_A Choline kinase; malaria 95.2 0.029 1E-06 60.3 7.3 74 480-558 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.1 0.38 1.3E-05 51.3 6.6 29 596-624 246-280 (401)
448 4ann_A ESSB; membrane protein, 82.6 5.5 0.00019 37.8 9.2 120 529-682 43-162 (215)
449 4ano_A ESSB; membrane protein, 71.7 12 0.00041 35.6 8.1 118 529-681 48-166 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 70.1 0.63 2.2E-05 50.5 -1.3 59 479-540 146-213 (463)
451 2lz0_A Uncharacterized protein 55.1 31 0.0011 28.1 6.7 43 123-166 11-53 (100)
452 2lz0_A Uncharacterized protein 51.2 22 0.00074 29.0 5.2 45 297-342 8-52 (100)
453 3ls8_A Phosphatidylinositol 3- 21.1 4.4E+02 0.015 29.0 10.6 82 534-623 402-501 (614)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-52 Score=436.61 Aligned_cols=260 Identities=30% Similarity=0.479 Sum_probs=215.2
Q ss_pred hccCcCceecccCCceEEEEEec------CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD------DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
++|.+.+.||+|+||+||+|.+. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56888899999999999999763 478899999987666667889999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEE
Q 046240 549 VLEYMPNGSLDIFLYSST------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHL 616 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl 616 (763)
|||||++|+|.++++..+ ..+++.++..|+.|||+||+|| |+++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997532 3689999999999999999999 6789999999999999999999999
Q ss_pred eeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccC
Q 046240 617 SDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLL 695 (763)
Q Consensus 617 ~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 695 (763)
+|||+|+.....+.........||+.|||||++.+..|+.++|||||||++|||+| |+.||......+.
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~---------- 239 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV---------- 239 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH----------
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH----------
Confidence 99999987654433333445679999999999999999999999999999999999 8999976432211
Q ss_pred ChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 696 PVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 696 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
...+........| +.++.++.+++.+||+.||++|||+++|.+.|+++.+..
T Consensus 240 ---~~~i~~~~~~~~p-------~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 240 ---IECITQGRVLQRP-------RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp ---HHHHHHTCCCCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred ---HHHHHcCCCCCCC-------ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 0111111111111 134667899999999999999999999999998876543
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1e-51 Score=436.10 Aligned_cols=261 Identities=26% Similarity=0.438 Sum_probs=209.3
Q ss_pred hccCcCceecccCCceEEEEEec------CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD------DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
++|...+.||+|+||+||+|.+. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 56778889999999999999764 478899999987666667889999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcE
Q 046240 549 VLEYMPNGSLDIFLYSST--------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIA 614 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~ 614 (763)
|||||++|+|.++++... .+++|.++..|+.|||+||+|| |+++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHhhEEECCCCcE
Confidence 999999999999987532 3589999999999999999999 67899999999999999999999
Q ss_pred EEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcc
Q 046240 615 HLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNG 693 (763)
Q Consensus 615 kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 693 (763)
||+|||+|+.+...+.........||+.|||||++.+..++.++|||||||++|||+| |+.||......+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--------- 268 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--------- 268 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH---------
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH---------
Confidence 9999999997754444444455679999999999999999999999999999999999 899997643221
Q ss_pred cCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 694 LLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 694 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
..+.+.+.. .+. .++.++.++.+++.+||+.||++||||+||++.|+.+.+.++
T Consensus 269 -----~~~~i~~g~--~~~----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 269 -----AIDCITQGR--ELE----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp -----HHHHHHHTC--CCC----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred -----HHHHHHcCC--CCC----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 111111111 011 112346678999999999999999999999999998877654
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-51 Score=429.15 Aligned_cols=260 Identities=27% Similarity=0.408 Sum_probs=204.5
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||+||+|.+.+ .||||+++.. .....+.|.+|++++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3578889999999999999998764 5999998643 34456789999999999999999999998865 56899999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
||++|+|.++++.....+++.++..|+.|||+||+|| |+++||||||||+|||+++++.+||+|||+|+........
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yL---H~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999987766799999999999999999999 6789999999999999999999999999999876543333
Q ss_pred cccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 632 MTQTQTLATIGYMAPEYGI---ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
.......||+.|||||++. .+.|+.++|||||||++|||+||+.||........ +...+.+...
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-------------~~~~~~~~~~ 255 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-------------IIFMVGRGYA 255 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-------------HHHHHHTTCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-------------HHHHHhcCCC
Confidence 3445568999999999875 34689999999999999999999999976432211 1111211111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcc
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQF 754 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~ 754 (763)
. |.. ......++..+.+++.+||+.+|++||||.||++.|+.+-
T Consensus 256 ~-p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 256 S-PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp C-CCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred C-CCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1 110 0111234667899999999999999999999999886543
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.4e-52 Score=434.03 Aligned_cols=255 Identities=25% Similarity=0.412 Sum_probs=210.0
Q ss_pred ccCcCceecccCCceEEEEEec------CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 476 RFGRDNLIGIGSFGYVYKAELD------DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 476 ~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
+++..+.||+|+||+||+|.+. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4566789999999999999763 46889999997543 2345789999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc
Q 046240 549 VLEYMPNGSLDIFLYSST---------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI 613 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~ 613 (763)
|||||++|+|.+++.... ..+++..+..|+.|||+||+|| |+++||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yL---H~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCccccceEECCCCC
Confidence 999999999999996431 3589999999999999999999 6789999999999999999999
Q ss_pred EEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhc
Q 046240 614 AHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVN 692 (763)
Q Consensus 614 ~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 692 (763)
+||+|||+|+.+...+.........||+.|||||++.++.|+.++|||||||++|||+| |+.||......+
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~-------- 255 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD-------- 255 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--------
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--------
Confidence 99999999987754443334455679999999999999999999999999999999999 899997643221
Q ss_pred ccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhc
Q 046240 693 GLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQ 753 (763)
Q Consensus 693 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~ 753 (763)
+.+.+..... .+.++.++..+.+++.+||+.||++||||+||++.|+..
T Consensus 256 ------~~~~i~~~~~------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 256 ------VVEMIRNRQV------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ------HHHHHHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ------HHHHHHcCCC------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1111211110 011123567789999999999999999999999999753
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-50 Score=423.90 Aligned_cols=280 Identities=24% Similarity=0.284 Sum_probs=206.2
Q ss_pred hccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCC----ceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD----FKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv~ 550 (763)
++|.+.+.||+|+||+||+|.+. |+.||||+++..... ....+.|+..+.+++|||||+++++|.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 46788899999999999999884 899999999765322 223345667777889999999999997654 579999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFR-----HTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~-----h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
|||++|+|.++++.. .+++..+.+++.|+++||+|||.. |.++||||||||+|||++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999765 489999999999999999999743 4569999999999999999999999999999887
Q ss_pred CCCCCc--cccccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCC-
Q 046240 626 SGEDQS--MTQTQTLATIGYMAPEYGIER------KVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLP- 696 (763)
Q Consensus 626 ~~~~~~--~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~- 696 (763)
...... .......||+.|||||++.+. .++.++|||||||++|||+||..|+............+......
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 122346799999999998654 46789999999999999999998876532211111111111111
Q ss_pred hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 697 VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 697 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
+.....+.....+.+-........+...+.+++.+||+.||++||||.||++.|+++.+++.
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 11222221111111111111122346778999999999999999999999999998877654
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.6e-50 Score=424.42 Aligned_cols=249 Identities=25% Similarity=0.283 Sum_probs=207.9
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
+.|+..+.||+|+||+||+|... +|+.||||++........+.+.+|++++++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56899999999999999999764 79999999998665455567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCccc
Q 046240 554 PNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMT 633 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 633 (763)
+||+|.+++... .+++.....++.||+.||+|| |+++||||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999999764 489999999999999999999 788999999999999999999999999999998753322 2
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccc
Q 046240 634 QTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEK 713 (763)
Q Consensus 634 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 713 (763)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||........ ...+..........
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--------------~~~i~~~~~~~~~~ 292 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--------------MKMIRDNLPPRLKN 292 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------------HHHHHHSSCCCCSC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--------------HHHHHcCCCCCCCc
Confidence 3456899999999999999999999999999999999999999976332211 11111111100000
Q ss_pred cHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 714 DFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 714 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...+..++.+++.+||..||++|||++|+++
T Consensus 293 ----~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 293 ----LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1123456889999999999999999999976
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1e-49 Score=420.53 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=201.3
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
++|++.+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6899999999999999999965 57999999999754 23456788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 552 YMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+||+|.+++...+ ..+++.....++.||+.||+|| |+++||||||||+|||+++++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999997543 3578889999999999999999 7889999999999999999999999999999876421
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||........ + ..++.......
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~------------~~i~~~~~~~~ 245 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL-V------------LKIISGSFPPV 245 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-H------------HHHHHTCCCCC
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-H------------HHHHcCCCCCC
Confidence 1123446799999999999999999999999999999999999999976432221 1 11111111101
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+ ..+..++.+++.+||+.||++|||++|+++
T Consensus 246 ~-------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 S-------LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp C-------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred C-------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 112456889999999999999999999985
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.3e-50 Score=427.06 Aligned_cols=268 Identities=22% Similarity=0.367 Sum_probs=217.4
Q ss_pred HHHHhccCcCceecccCCceEEEEEecC------CceEEEEEeehhh-HHHHHHHHHHHHHHHhCCC-CccceEEeeeec
Q 046240 471 SRATNRFGRDNLIGIGSFGYVYKAELDD------GIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRH-RNLVKIISGCSN 542 (763)
Q Consensus 471 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~ 542 (763)
+...++|++.+.||+|+||+||+|.+.. ++.||||+++... ....+.+.+|++++++++| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 3446789999999999999999997642 3679999997653 3446779999999999965 999999999976
Q ss_pred C-CceEEEEEccCCCChhhhhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCE
Q 046240 543 D-DFKALVLEYMPNGSLDIFLYSST---------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNV 606 (763)
Q Consensus 543 ~-~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NI 606 (763)
. +..++|||||++|+|.++++... ..+++..+..++.|||+||+|| |+++||||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL---H~~~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH---hhCCeecCccCccce
Confidence 5 56899999999999999996532 2478999999999999999999 788999999999999
Q ss_pred EecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhh
Q 046240 607 LLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAEL 685 (763)
Q Consensus 607 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~ 685 (763)
|+++++.+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||.......
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~- 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-
Confidence 999999999999999998755444444456679999999999999999999999999999999998 999997643211
Q ss_pred hhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCccc
Q 046240 686 SLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSSE 760 (763)
Q Consensus 686 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~~ 760 (763)
.+...+....... .++.+..++.+++..||+.||++|||+.||++.|+++++.+..+
T Consensus 296 ------------~~~~~i~~g~~~~------~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~q 352 (353)
T 4ase_A 296 ------------EFCRRLKEGTRMR------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 352 (353)
T ss_dssp ------------HHHHHHHHTCCCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC--
T ss_pred ------------HHHHHHHcCCCCC------CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhCC
Confidence 1222222211100 11123567899999999999999999999999999998876654
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.4e-49 Score=412.52 Aligned_cols=248 Identities=26% Similarity=0.349 Sum_probs=208.6
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|++.+.||+|+||+||+|.. .+|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999965 579999999998653 223567899999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||++||+|.+++...+ .++......++.||+.||+|| |+++|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYL---HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999997654 589999999999999999999 788999999999999999999999999999998865444
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||........ ...++..... -
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~-------------~~~i~~~~~~-~ 253 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI-------------FAKIIKLEYD-F 253 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHTCCC-C
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-------------HHHHHcCCCC-C
Confidence 4444567899999999999999999999999999999999999999976432211 1111111111 1
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCN 747 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~ 747 (763)
|. ....++.+++.+|+..||++|||++|+.
T Consensus 254 p~-------~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 PE-------KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CT-------TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred Cc-------ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11 1244578999999999999999999874
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9e-50 Score=419.12 Aligned_cols=256 Identities=23% Similarity=0.297 Sum_probs=206.0
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
.+.|...++||+|+||+||+|.. .+|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 35688889999999999999976 4799999999975422 24699999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC-cEEEeeecCceecCCCCCc
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM-IAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~-~~kl~Dfgla~~~~~~~~~ 631 (763)
|+||+|.+++...+ .+++.....++.||++||+|| |+++||||||||+|||++.++ .+||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYL---HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999999997654 589999999999999999999 789999999999999999987 6999999999987543321
Q ss_pred ---cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 632 ---MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 632 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||........ ...+...
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-------------~~~i~~~--- 271 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-------------CLKIASE--- 271 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-------------HHHHHHS---
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-------------HHHHHcC---
Confidence 122345799999999999999999999999999999999999999976432211 1111111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
.+.. ......+...+.+++.+||+.||++|||+.|+++.|.+.++.
T Consensus 272 -~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 272 -PPPI-REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp -CCGG-GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCc-hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 0000 001112356688999999999999999999999988766543
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4e-49 Score=425.54 Aligned_cols=249 Identities=25% Similarity=0.283 Sum_probs=207.6
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
+.|+..+.||+|+||+||+|... +|+.||||++........+.+.+|+.+|++++|||||+++++|.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999764 79999999997655445567889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCccc
Q 046240 554 PNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMT 633 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 633 (763)
+||+|.+++... .+++..+..++.||++||+|| |+++||||||||+|||++.+|.+||+|||+|+.+..... .
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~yl---H~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--C
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--c
Confidence 999999999764 489999999999999999999 788999999999999999999999999999998753322 2
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccc
Q 046240 634 QTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEK 713 (763)
Q Consensus 634 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 713 (763)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||........ ...+..........
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--------------~~~i~~~~~~~~~~ 369 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--------------MKMIRDNLPPRLKN 369 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------------HHHHHHSCCCCCSC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--------------HHHHHcCCCCCCcc
Confidence 3456899999999999999999999999999999999999999976332211 11111111100000
Q ss_pred cHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 714 DFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 714 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...+..++.+++.+||..||++|||+.|+++
T Consensus 370 ----~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 370 ----LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ----TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0112456889999999999999999999986
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-48 Score=401.86 Aligned_cols=244 Identities=25% Similarity=0.363 Sum_probs=194.5
Q ss_pred CcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeec----CCceEEEE
Q 046240 478 GRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSN----DDFKALVL 550 (763)
Q Consensus 478 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 550 (763)
...+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++|||||+++++|.. ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999664 68999999997542 3456778999999999999999999999864 34689999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEecC-CCcEEEeeecCceecCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTP--IIHCDLKSSNVLLDE-DMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~dlk~~NIll~~-~~~~kl~Dfgla~~~~~ 627 (763)
|||++|+|.+++.... .+++..+..++.||++||+|| |+++ ||||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~yl---H~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999997644 689999999999999999999 5555 999999999999984 78999999999986432
Q ss_pred CCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 628 EDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 628 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
. .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||...............+..+
T Consensus 185 ~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~----------- 248 (290)
T 3fpq_A 185 S----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----------- 248 (290)
T ss_dssp T----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC-----------
T ss_pred C----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC-----------
Confidence 1 2344689999999998865 69999999999999999999999997532221111111111100
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. .....+..++.+++.+||+.||++|||++|+++
T Consensus 249 ----~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 249 ----A---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----G---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----C---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 011112346789999999999999999999875
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.6e-48 Score=395.81 Aligned_cols=245 Identities=23% Similarity=0.351 Sum_probs=189.7
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|++.+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5899999999999999999976 479999999997542 223567899999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+ +|+|.+++...+ .++......++.|++.||+|| |+++|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~yl---H~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 678988887654 689999999999999999999 78899999999999999999999999999998764322
Q ss_pred ccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
.....+||+.|||||++.+..+ +.++||||+||++|||+||+.||........ . ..+..... .
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~-~------------~~i~~~~~-~ 230 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL-F------------KNISNGVY-T 230 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H------------HHHHHTCC-C
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH-H------------HHHHcCCC-C
Confidence 2234679999999999988876 5799999999999999999999976322111 1 11111111 1
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.|. ....++.+++.+|++.||++|||++|+++
T Consensus 231 ~p~-------~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 231 LPK-------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCT-------TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCC-------CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111 12456789999999999999999999986
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.7e-47 Score=395.04 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=188.8
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCC--------
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD-------- 544 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 544 (763)
++|++.+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 5699999999999999999976 478999999987443 344567899999999999999999999986544
Q ss_pred ----ceEEEEEccCCCChhhhhccCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEee
Q 046240 545 ----FKALVLEYMPNGSLDIFLYSSTC--MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSD 618 (763)
Q Consensus 545 ----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~D 618 (763)
..|+|||||++|+|.+++..... ..++.....++.|+++||+|| |+++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~yl---H~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHH---HHCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999976542 456677889999999999999 788999999999999999999999999
Q ss_pred ecCceecCCCCCc----------cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhh
Q 046240 619 FGIAKLLSGEDQS----------MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLK 688 (763)
Q Consensus 619 fgla~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 688 (763)
||+|+.+...... ...+..+||+.|||||++.+..|+.++|||||||++|||++ ||.........+.
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 9999887533221 11234579999999999999999999999999999999996 7765322211111
Q ss_pred hhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 689 HWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 689 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.......| ...........+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~p-------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 239 DVRNLKFP-------------------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHTTCCC-------------------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcCCCC-------------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111 111122344678999999999999999999986
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.9e-48 Score=401.85 Aligned_cols=242 Identities=26% Similarity=0.340 Sum_probs=193.1
Q ss_pred hccCcCceecccCCceEEEEEec----CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD----DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
++|++.+.||+|+||+||+|... +++.||||+++... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999652 47889999997542 1223467889999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
|||||+||+|.+++...+ .++......++.|++.||+|| |+++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~yl---H~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997654 689999999999999999999 7889999999999999999999999999999875432
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
.. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||......+. . ..+.....
T Consensus 180 ~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~------------~~i~~~~~- 243 (304)
T 3ubd_A 180 EK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-M------------TMILKAKL- 243 (304)
T ss_dssp -C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H------------HHHHHCCC-
T ss_pred Cc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH-H------------HHHHcCCC-
Confidence 22 23456899999999999999999999999999999999999999976432221 1 11111111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINA 743 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~ 743 (763)
..|. .+..++.+++.+||+.||++|||+
T Consensus 244 ~~p~-------~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 GMPQ-------FLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred CCCC-------cCCHHHHHHHHHHcccCHHHCCCC
Confidence 1111 124567899999999999999996
No 16
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.8e-44 Score=380.21 Aligned_cols=303 Identities=35% Similarity=0.645 Sum_probs=214.8
Q ss_pred CCChhhHHHHHHHHHhccCCCCcccccCCCCCCCCCc--ccceeecCCC--CceEEEEecCCCCCC--cCCcccCCCCCC
Q 046240 30 SNITTDQQALLALEAHISYDPTNLLAQNWTSNTSVCN--WIGITCDVNS--HRVTALNISSLNLQG--EIPHEIGYLPSL 103 (763)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~L~L~~~~l~~--~~~~~~~~l~~L 103 (763)
.+.+.|.+||++||+.+. ||. .++ +|..+.+||. |.||+|+... ++|+.|+|++|++++ .+|+.|+++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~-~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLS-SWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGT-TCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-ccc-CCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 467889999999999985 665 565 8988889998 9999998654 799999999999998 888888888887
Q ss_pred CEEEcCC-CcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCch
Q 046240 104 TKLALGY-NSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNI 182 (763)
Q Consensus 104 ~~L~L~~-n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 182 (763)
++|+|++ |.++ +.+|..+. ++++|++|+|++|+|++.+|..|.++++|++|+|++|+|++.+|..|.++
T Consensus 79 ~~L~L~~~n~l~------~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--- 148 (313)
T 1ogq_A 79 NFLYIGGINNLV------GPIPPAIA-KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL--- 148 (313)
T ss_dssp SEEEEEEETTEE------SCCCGGGG-GCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC---
T ss_pred CeeeCCCCCccc------ccCChhHh-cCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcC---
Confidence 7777773 5554 34443332 44444444444444444444444444444444444444443333333222
Q ss_pred hhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCcc-ccceeecccccccCCCCccccccCCCCc
Q 046240 183 EWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLS-IFLLLDLELNKLTGPIPVTFGRLQNSKL 261 (763)
Q Consensus 183 ~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~~~L 261 (763)
+ +|++|+|++|++++.+|..+..++ + |
T Consensus 149 -------------------------~-~L~~L~L~~N~l~~~~p~~l~~l~~~--------------------------L 176 (313)
T 1ogq_A 149 -------------------------P-NLVGITFDGNRISGAIPDSYGSFSKL--------------------------F 176 (313)
T ss_dssp -------------------------T-TCCEEECCSSCCEEECCGGGGCCCTT--------------------------C
T ss_pred -------------------------C-CCCeEECcCCcccCcCCHHHhhhhhc--------------------------C
Confidence 2 444555555555544444444443 4 5
Q ss_pred cEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCc
Q 046240 262 DTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLS 341 (763)
Q Consensus 262 ~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 341 (763)
++|++++|++++.+|. .+..++ |++|+|++|++++..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 177 ~~L~L~~N~l~~~~~~--~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 177 TSMTISRNRLTGKIPP--TFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp CEEECCSSEEEEECCG--GGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cEEECcCCeeeccCCh--HHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 5555555555555555 455555 77777777777777777788888888888888888866665 7788899999999
Q ss_pred CCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCcccCCCCCCCCCC
Q 046240 342 NNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGLPHLQVPQC 404 (763)
Q Consensus 342 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~p~~~~~~c 404 (763)
+|++++.+|..+..+++|+.|+|++|++++.+|....++.+..+++.+|+++|+.| .++|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p---~~~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP---LPAC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT---SSCC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC---CCCC
Confidence 99998888889999999999999999999999988888999999999999999987 4456
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-44 Score=390.28 Aligned_cols=268 Identities=24% Similarity=0.251 Sum_probs=201.9
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeec------CCc
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSN------DDF 545 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 545 (763)
++|++.+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5799999999999999999966 579999999996542 3445678899999999999999999998753 357
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.|+|||||+ |+|.+++...+ .+++..+..++.||+.||.|| |+++||||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~yl---H~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYM---HSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 67888887654 689999999999999999999 7889999999999999999999999999999876
Q ss_pred CCCCC--ccccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhh--hcccCCh---
Q 046240 626 SGEDQ--SMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHW--VNGLLPV--- 697 (763)
Q Consensus 626 ~~~~~--~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~--~~~~~~~--- 697 (763)
..... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+...... +... ..+..+.
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~-l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ-LQLIMMVLGTPSPAVI 287 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH-HHHHHHHHCCCCGGGT
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHH-HHHHHHhcCCCChHHh
Confidence 43221 2233457899999999998765 569999999999999999999999976432221 1111 1111111
Q ss_pred ------hHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 698 ------SLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 698 ------~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.....+...-...+..-.........++.+++.+|+..||++|||+.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 111122111111111000000112456789999999999999999999885
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.9e-44 Score=382.54 Aligned_cols=268 Identities=20% Similarity=0.255 Sum_probs=199.7
Q ss_pred HHHhccCcCceecccCCceEEEEEec----CCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCce
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAELD----DGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 546 (763)
...++|++.+.||+|+||+||+|..+ +++.||+|++.... ....+.+|+++++.+ +||||+++++++.+.++.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34678999999999999999999653 46889999986543 235678899999998 699999999999999999
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC-CcEEEeeecCceec
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED-MIAHLSDFGIAKLL 625 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~-~~~kl~Dfgla~~~ 625 (763)
|+||||+++|+|.+++. .++..+...++.|++.||+|| |+++|+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~yl---H~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRI---HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999984 378899999999999999999 78999999999999999877 79999999999876
Q ss_pred CCCCCc--------------------------cccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCc
Q 046240 626 SGEDQS--------------------------MTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPAD 678 (763)
Q Consensus 626 ~~~~~~--------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~ 678 (763)
...... ......+||++|+|||++.+. .|+.++||||+||++|||+||+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 432210 112345799999999998775 58999999999999999999999996
Q ss_pred hhhhhhhhhhhhhc---------------------ccCC-hhHHHHHHhhcCCC---cccc---------HHHHHHHHHH
Q 046240 679 KMFAAELSLKHWVN---------------------GLLP-VSLMEVVNKTLLSP---PEKD---------FAAKEQCVLS 724 (763)
Q Consensus 679 ~~~~~~~~~~~~~~---------------------~~~~-~~~~~~i~~~l~~~---~~~~---------~~~~~~~~~~ 724 (763)
........+..... ...+ ........+..... +... .........+
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~ 328 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDE 328 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHH
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHH
Confidence 43322222111110 0011 11222221111100 0000 0000112346
Q ss_pred HHHHHHHccccCcCCCCCHHHHHH
Q 046240 725 IFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 725 l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+++.+|+..||++|||++|+++
T Consensus 329 a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 329 AYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHCcCChhHCcCHHHHhc
Confidence 789999999999999999999875
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.8e-43 Score=401.69 Aligned_cols=251 Identities=20% Similarity=0.257 Sum_probs=209.1
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
++|++.+.||+|+||+||+|.. .+|+.||+|++........+.+.+|+++|+.++|||||++++++.+.+..|+|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 6899999999999999999966 479999999998665556678899999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC--CcEEEeeecCceecCCCCCc
Q 046240 554 PNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED--MIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~--~~~kl~Dfgla~~~~~~~~~ 631 (763)
+||+|.+++......+++.....++.||++||+|| |+++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~yl---H~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~-- 311 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM---HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 311 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC--
Confidence 99999999976666789999999999999999999 78899999999999999854 899999999999875432
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCc
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPP 711 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 711 (763)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||........ +.. +..... ..+
T Consensus 312 -~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~------------i~~~~~-~~~ 376 (573)
T 3uto_A 312 -SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRN------------VKSCDW-NMD 376 (573)
T ss_dssp -EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH------------HHTTCC-CCC
T ss_pred -ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHH------------HHhCCC-CCC
Confidence 23346799999999999999999999999999999999999999976433221 111 111001 001
Q ss_pred cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 712 EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 712 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.. .......++.+++.+||..||++||++.|+++
T Consensus 377 ~~---~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 377 DS---AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp SG---GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cc---cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 11123456789999999999999999999986
No 20
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.6e-43 Score=418.37 Aligned_cols=322 Identities=30% Similarity=0.470 Sum_probs=200.0
Q ss_pred hhcCCChhhHHHHHHHHHhccCCCCcccccCCCCCCCCCcccceeecCCCCceEEEEecCCCCCCc---CC---------
Q 046240 27 AATSNITTDQQALLALEAHISYDPTNLLAQNWTSNTSVCNWIGITCDVNSHRVTALNISSLNLQGE---IP--------- 94 (763)
Q Consensus 27 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~---~~--------- 94 (763)
+++...+.|++||++||+.+. ||. .++ +|..++|||+|.||+|+ .++|+.|+|+++.+.|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~-~~~-~l~-~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP-DKN-LLP-DWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS-CTT-SST-TCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred ccccCCHHHHHHHHHHHhhCC-Ccc-ccc-CCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 334446789999999999997 887 776 89888899999999998 68999999999999886 44
Q ss_pred --------------cccCCCCCCCEEEcCCCcccCCCccccCccc--cccccCCCccEEEcccccccccCCCcc-cCCCC
Q 046240 95 --------------HEIGYLPSLTKLALGYNSLVGNNSLSGSLPS--RIDLALPNVKALSLAYNRFSGTIQSPI-TNASK 157 (763)
Q Consensus 95 --------------~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~--~~~~~l~~L~~L~L~~N~i~~~~p~~~-~~l~~ 157 (763)
+.|+.+++|++|+|++|.++ |.+|. .+ .++++|++|+|++|.+++.+|..+ .++++
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~------~~~~~~~~l-~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 152 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLS------GPVTTLTSL-GSCSGLKFLNVSSNTLDFPGKVSGGLKLNS 152 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEE------EEGGGGGGG-GGCTTCCEEECCSSEEECCSSCCSCCCCTT
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCC------CcCCChHHH-hCCCCCCEEECcCCccCCcCCHHHhccCCC
Confidence 46677777788888777775 45665 43 377777777777777777776655 67777
Q ss_pred CCeeeecCcccccccccc---cCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccc
Q 046240 158 LTILELGGNSFSGFIPNT---IGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSI 234 (763)
Q Consensus 158 L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~ 234 (763)
|++|+|++|++++..|.. +.++++|++|+ +++|.+++..|. ..+. +|++|+|++|++++.+|. ++.+++
T Consensus 153 L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~----Ls~n~l~~~~~~--~~l~-~L~~L~Ls~n~l~~~~~~-l~~l~~ 224 (768)
T 3rgz_A 153 LEVLDLSANSISGANVVGWVLSDGCGELKHLA----ISGNKISGDVDV--SRCV-NLEFLDVSSNNFSTGIPF-LGDCSA 224 (768)
T ss_dssp CSEEECCSSCCEEETHHHHHHTTCCTTCCEEE----CCSSEEESCCBC--TTCT-TCCEEECCSSCCCSCCCB-CTTCCS
T ss_pred CCEEECCCCccCCcCChhhhhhccCCCCCEEE----CCCCcccccCCc--ccCC-cCCEEECcCCcCCCCCcc-cccCCC
Confidence 777777777777666655 56666666666 445555544332 3343 555555555555554444 555555
Q ss_pred cceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCC-cCccE
Q 046240 235 FLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGL-KDVQN 313 (763)
Q Consensus 235 L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~ 313 (763)
|++|+|++|++++.+|..+.++++ |++|+|++|++++.+|. . .+++|++|+|++|++++.+|..+... ++|++
T Consensus 225 L~~L~Ls~n~l~~~~~~~l~~l~~--L~~L~Ls~n~l~~~~~~--~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~ 298 (768)
T 3rgz_A 225 LQHLDISGNKLSGDFSRAISTCTE--LKLLNISSNQFVGPIPP--L--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTG 298 (768)
T ss_dssp CCEEECCSSCCCSCHHHHTTTCSS--CCEEECCSSCCEESCCC--C--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSE
T ss_pred CCEEECcCCcCCCcccHHHhcCCC--CCEEECCCCcccCccCc--c--ccCCCCEEECcCCccCCccCHHHHhhcCcCCE
Confidence 555555555555555555555544 55555555555544443 1 44445555555555554444444443 45555
Q ss_pred EEccCccccCcccccccccccccEEeCcCCccCCccchh-hhhhccCceEEcccccCCCCCC
Q 046240 314 ISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILIS-LEKLLYLKKLNLSFNKLEGEIP 374 (763)
Q Consensus 314 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~~~~p 374 (763)
|+|++|++++.+|..|+.+++|++|+|++|++++.+|.. +..+++|++|++++|++++.+|
T Consensus 299 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p 360 (768)
T 3rgz_A 299 LDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360 (768)
T ss_dssp EECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCC
T ss_pred EECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCcccc
Confidence 555555555444555555555555555555554333332 4444555555555555544444
No 21
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.4e-43 Score=407.99 Aligned_cols=349 Identities=23% Similarity=0.333 Sum_probs=307.0
Q ss_pred CChhhHHHHHHHHHhccCCCCccc------ccCCCCCCCCCcc---cceeecCCCCceEEEEecCCCCCCcCCcccCCCC
Q 046240 31 NITTDQQALLALEAHISYDPTNLL------AQNWTSNTSVCNW---IGITCDVNSHRVTALNISSLNLQGEIPHEIGYLP 101 (763)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~~~~~~~------~~~w~~~~~~c~w---~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~ 101 (763)
....|+.||.+++.++..+.+..- ..+|..+.++|.| .||+|+.. ++|+.|+|+++++.|.+|++|++|+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCc
Confidence 345799999999998764433211 1279988999999 99999865 8999999999999999999999999
Q ss_pred CCCEEEcCCCcc------cC------------------------------------------------------------
Q 046240 102 SLTKLALGYNSL------VG------------------------------------------------------------ 115 (763)
Q Consensus 102 ~L~~L~L~~n~l------~~------------------------------------------------------------ 115 (763)
+|++|+|++|.+ .+
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 999999999975 11
Q ss_pred ------CCccccCccccccccCCCccEEEccccccccc-----------------CCCccc--CCCCCCeeeecCccccc
Q 046240 116 ------NNSLSGSLPSRIDLALPNVKALSLAYNRFSGT-----------------IQSPIT--NASKLTILELGGNSFSG 170 (763)
Q Consensus 116 ------~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~ 170 (763)
.|.++| ||..+. ++++|++|+|++|.|++. +|..++ ++++|++|+|++|++.+
T Consensus 186 l~l~~~~n~l~~-ip~~l~-~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVM-RLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGG-GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhccccCCCcc-CCHHHh-cccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 246666 888755 899999999999999986 999999 99999999999999999
Q ss_pred ccccccCCCCchhhhhhhhhccCCc-ccc-cCCcccccc------cccccEEEeecCcccccccc--ccCCccccceeec
Q 046240 171 FIPNTIGNLRNIEWLGLVIGLIGNP-LNG-ILPSSIVNL------SISLERLYISNCSITGNIPQ--VMGNLSIFLLLDL 240 (763)
Q Consensus 171 ~~p~~~~~l~~L~~L~L~~~l~~n~-l~~-~~p~~~~~l------~~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L 240 (763)
.+|..|+++++|++|+ +++|+ +++ .+|..+..+ + +|++|+|++|+++ .+|. .|+++++|++|+|
T Consensus 264 ~~p~~l~~l~~L~~L~----Ls~n~~l~~~~lp~~~~~L~~~~~l~-~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L 337 (636)
T 4eco_A 264 KLPTFLKALPEMQLIN----VACNRGISGEQLKDDWQALADAPVGE-KIQIIYIGYNNLK-TFPVETSLQKMKKLGMLEC 337 (636)
T ss_dssp SCCTTTTTCSSCCEEE----CTTCTTSCHHHHHHHHHHHHHSGGGG-TCCEEECCSSCCS-SCCCHHHHTTCTTCCEEEC
T ss_pred cChHHHhcCCCCCEEE----CcCCCCCccccchHHHHhhhccccCC-CCCEEECCCCcCC-ccCchhhhccCCCCCEEeC
Confidence 9999999999999999 88998 998 899999887 6 9999999999999 8888 9999999999999
Q ss_pred ccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCc-ccEEEcccccccccCCcccCCCc--CccEEEcc
Q 046240 241 ELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKV-VVEINLSRNNFSGDIPATIGGLK--DVQNISLP 317 (763)
Q Consensus 241 ~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls 317 (763)
++|+++|.+| .+..+++ |++|+|++|+++ .+|. .+.++++ |++|++++|+++ .+|..+..++ +|+.|+++
T Consensus 338 ~~N~l~g~ip-~~~~l~~--L~~L~L~~N~l~-~lp~--~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls 410 (636)
T 4eco_A 338 LYNQLEGKLP-AFGSEIK--LASLNLAYNQIT-EIPA--NFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFS 410 (636)
T ss_dssp CSCCCEEECC-CCEEEEE--ESEEECCSSEEE-ECCT--TSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECC
T ss_pred cCCcCccchh-hhCCCCC--CCEEECCCCccc-cccH--hhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECc
Confidence 9999999999 8999977 999999999999 8888 7999999 999999999999 7888888765 99999999
Q ss_pred CccccCccccccc-------ccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC-CCc--------cc
Q 046240 318 YNRLEGPIPESFG-------YLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG-GPF--------AN 381 (763)
Q Consensus 318 ~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~--------~~ 381 (763)
+|++++.+|..+. .+++|++|+|++|+++.+++..+..+++|+.|+|++|+++ .+|.. ... +.
T Consensus 411 ~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~ 489 (636)
T 4eco_A 411 YNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYL 489 (636)
T ss_dssp SSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGG
T ss_pred CCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCC
Confidence 9999999999888 8889999999999999877777888999999999999999 45543 221 17
Q ss_pred cccccccCCCcccCCC
Q 046240 382 FTAKSFMGNEKLCGLP 397 (763)
Q Consensus 382 l~~~~~~~n~~~c~~p 397 (763)
+..+++.+|... ..|
T Consensus 490 L~~L~Ls~N~l~-~lp 504 (636)
T 4eco_A 490 LTSIDLRFNKLT-KLS 504 (636)
T ss_dssp CCEEECCSSCCC-BCC
T ss_pred ccEEECcCCcCC-ccC
Confidence 888888888654 444
No 22
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.3e-42 Score=388.91 Aligned_cols=247 Identities=23% Similarity=0.274 Sum_probs=196.5
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHH---HHHHHHHhCCCCccceEEeeeecCCceE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFE---VECEVMKNIRHRNLVKIISGCSNDDFKA 547 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~---~e~~~l~~l~h~niv~l~~~~~~~~~~~ 547 (763)
++|++.++||+|+||+||+|... +|+.||||++.+... ....... .++.+++.++|||||+++++|.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 67999999999999999999664 799999999975431 1122233 3456666779999999999999999999
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCC
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 627 (763)
+||||++||+|..++...+ .++......++.||+.||+|| |+++||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 269 lVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yL---H~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 9999999999999997654 589999999999999999999 889999999999999999999999999999998753
Q ss_pred CCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 628 EDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 628 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
.. ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||........ .++....
T Consensus 345 ~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--------------~~i~~~i 406 (689)
T 3v5w_A 345 KK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--------------HEIDRMT 406 (689)
T ss_dssp CC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--------------HHHHHHH
T ss_pred CC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--------------HHHHHhh
Confidence 32 234689999999999864 5799999999999999999999999976322110 1111111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCC-----HHHHH
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRIN-----AKCCN 747 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps-----~~~v~ 747 (763)
+...+... .....++.+++..|+..||++|++ ++||.
T Consensus 407 ~~~~~~~p----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 407 LTMAVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp HHCCCCCC----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred cCCCCCCC----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 11111110 112456789999999999999998 56654
No 23
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.9e-42 Score=368.97 Aligned_cols=290 Identities=33% Similarity=0.497 Sum_probs=230.3
Q ss_pred cCCCChHHHHHHHhccCcCceecccCCceEEEEEecCCceEEEEEeehhhH-HHHHHHHHHHHHHHhCCCCccceEEeee
Q 046240 462 KRRLPYQDLSRATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECA-RAMKSFEVECEVMKNIRHRNLVKIISGC 540 (763)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~ 540 (763)
...+++.++....++|...+.||+|+||.||+|...+|+.||||++..... .....+.+|+++++.++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456788999999999999999999999999999888899999999875532 2234688999999999999999999999
Q ss_pred ecCCceEEEEEccCCCChhhhhccCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEe
Q 046240 541 SNDDFKALVLEYMPNGSLDIFLYSST---CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLS 617 (763)
Q Consensus 541 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~ 617 (763)
...+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||..+..+|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999997643 258999999999999999999976555699999999999999999999999
Q ss_pred eecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhh---hhhhhhhhhccc
Q 046240 618 DFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFA---AELSLKHWVNGL 694 (763)
Q Consensus 618 Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~---~~~~~~~~~~~~ 694 (763)
|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......|....
T Consensus 177 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 177 DFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred cCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 9999987653322 233445699999999999888899999999999999999999999975321 111222333222
Q ss_pred CCh-hHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 695 LPV-SLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 695 ~~~-~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
... ....+.+..+ ...........+.+++..|++.+|++|||+.+|++.|+.....+.
T Consensus 256 ~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~ 314 (326)
T 3uim_A 256 LKEKKLEALVDVDL------QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAER 314 (326)
T ss_dssp TSSCCSTTSSCTTC------TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSS
T ss_pred hhchhhhhhcChhh------ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhh
Confidence 221 1111111111 111123446789999999999999999999999999987655543
No 24
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2e-42 Score=367.99 Aligned_cols=286 Identities=34% Similarity=0.526 Sum_probs=226.1
Q ss_pred CCCChHHHHHHHhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeec
Q 046240 463 RRLPYQDLSRATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSN 542 (763)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 542 (763)
.+++..++..++++|...+.||+|+||.||+|...+|+.||||++........+.+.+|+++++.++||||+++++++..
T Consensus 27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 45566667778899999999999999999999988899999999876655556788999999999999999999999999
Q ss_pred CCceEEEEEccCCCChhhhhccCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeee
Q 046240 543 DDFKALVLEYMPNGSLDIFLYSST---CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDF 619 (763)
Q Consensus 543 ~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Df 619 (763)
.+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|| |+++|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh---cCCCeecCCCCHHHEEECCCCCEEEeec
Confidence 999999999999999999997643 2589999999999999999999 6789999999999999999999999999
Q ss_pred cCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhh-hhhhhhhcccC-Ch
Q 046240 620 GIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAE-LSLKHWVNGLL-PV 697 (763)
Q Consensus 620 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~-~~~~~~~~~~~-~~ 697 (763)
|+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....|..... ..
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 99987643333333345568999999999988899999999999999999999999987532211 11111110000 00
Q ss_pred hHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 698 SLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 698 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
...+++ .+.........+...+.+++.+||+.||++||++.++++.|+.+++..
T Consensus 264 ~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 264 QLEQIV------DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CCCSSS------SSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cHHHhc------ChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 000000 011111112345778999999999999999999999999999877643
No 25
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.6e-42 Score=365.96 Aligned_cols=276 Identities=25% Similarity=0.315 Sum_probs=213.4
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCC----ceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD----FKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv 549 (763)
.++|++.+.||+|+||+||+|... ++.||||++..... ......+|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 468999999999999999999876 78999999976533 2345567899999999999999999997754 46999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CeEeCCCCCCCEEecCCCcEEEeee
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTT----------PIIHCDLKSSNVLLDEDMIAHLSDF 619 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~----------~ivH~dlk~~NIll~~~~~~kl~Df 619 (763)
|||+++|+|.+++.... +++..+..++.|+++||+|| |+. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~L---H~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYL---HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHH---TCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH---HhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999997654 89999999999999999999 666 9999999999999999999999999
Q ss_pred cCceecCCCCCccccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh-hhhhhhcc
Q 046240 620 GIAKLLSGEDQSMTQTQTLATIGYMAPEYGIE-----RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL-SLKHWVNG 693 (763)
Q Consensus 620 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~-~~~~~~~~ 693 (763)
|+++.+.............||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ........
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99988765444333445679999999999876 3566789999999999999999999976432211 11111111
Q ss_pred cCC-hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 694 LLP-VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 694 ~~~-~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
... ....+.+.................+..++.+++.+||+.||++|||+.+|++.|+++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111 122222222222111111122234467799999999999999999999999999987543
No 26
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1e-41 Score=404.58 Aligned_cols=321 Identities=35% Similarity=0.574 Sum_probs=270.8
Q ss_pred CceEEEEecCCCCCCcCCcccCCCC-CCCEEEcCCCcccC--------------------CCccccCccccccccCCCcc
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLP-SLTKLALGYNSLVG--------------------NNSLSGSLPSRIDLALPNVK 135 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~-~L~~L~L~~n~l~~--------------------~~~~~~~lp~~~~~~l~~L~ 135 (763)
.++++|+|++|.+++.+|..+.+++ +|++|+|++|.+++ .|.+.+.+|..+. ++++|+
T Consensus 343 ~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~-~l~~L~ 421 (768)
T 3rgz_A 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS-NCSELV 421 (768)
T ss_dssp TTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGG-GCTTCC
T ss_pred CCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHh-cCCCCC
Confidence 4566666666666666666665554 55555555555431 1223345665554 788888
Q ss_pred EEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEE
Q 046240 136 ALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLY 215 (763)
Q Consensus 136 ~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~ 215 (763)
+|+|++|++++.+|..|.++++|++|+|++|++++.+|..|..+++|++|+ +++|++++.+|..+.+++ +|++|+
T Consensus 422 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~----L~~N~l~~~~p~~l~~l~-~L~~L~ 496 (768)
T 3rgz_A 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI----LDFNDLTGEIPSGLSNCT-NLNWIS 496 (768)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE----CCSSCCCSCCCGGGGGCT-TCCEEE
T ss_pred EEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE----ecCCcccCcCCHHHhcCC-CCCEEE
Confidence 888888888888888888888888888888888888888888888888888 788899888888888888 899999
Q ss_pred eecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCcc----------------
Q 046240 216 ISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCI---------------- 279 (763)
Q Consensus 216 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~---------------- 279 (763)
|++|++++.+|..|+.+++|++|+|++|++++.+|..+.++++ |+.|++++|.++|.+|...
T Consensus 497 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 497 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS--LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTT--CCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred ccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCC--CCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 9999999888988999999999999999998888988888876 9999999998888777521
Q ss_pred ----------------------------------------------------ccccCCcccEEEcccccccccCCcccCC
Q 046240 280 ----------------------------------------------------DIGNLKVVVEINLSRNNFSGDIPATIGG 307 (763)
Q Consensus 280 ----------------------------------------------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 307 (763)
.+..+++|+.|||++|+++|.+|..|++
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 2344678999999999999999999999
Q ss_pred CcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccc
Q 046240 308 LKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSF 387 (763)
Q Consensus 308 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~ 387 (763)
+++|+.|+|++|+++|.+|..|+.+++|+.|||++|++++.+|..+..+++|++||+++|+++|.+|..+.+..+....+
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~ 734 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKF 734 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGG
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCCCCCCCCCCCCCC
Q 046240 388 MGNEKLCGLPHLQVPQCKHQT 408 (763)
Q Consensus 388 ~~n~~~c~~p~~~~~~c~~~~ 408 (763)
.||+.+||.| +++|....
T Consensus 735 ~gN~~Lcg~~---l~~C~~~~ 752 (768)
T 3rgz_A 735 LNNPGLCGYP---LPRCDPSN 752 (768)
T ss_dssp CSCTEEESTT---SCCCCSCC
T ss_pred cCCchhcCCC---CcCCCCCc
Confidence 9999999987 45887543
No 27
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.7e-41 Score=364.87 Aligned_cols=262 Identities=24% Similarity=0.438 Sum_probs=214.7
Q ss_pred HhccCcCceecccCCceEEEEEec--------CCceEEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceEEeeeecC
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD--------DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKIISGCSND 543 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 543 (763)
.++|.+.+.||+|+||.||+|... ++..||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 468999999999999999999652 35679999997553 34567789999999999 899999999999999
Q ss_pred CceEEEEEccCCCChhhhhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe
Q 046240 544 DFKALVLEYMPNGSLDIFLYSST---------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL 608 (763)
Q Consensus 544 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll 608 (763)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|| |+++|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchhhEEE
Confidence 99999999999999999997643 2478899999999999999999 77899999999999999
Q ss_pred cCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhh
Q 046240 609 DEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSL 687 (763)
Q Consensus 609 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 687 (763)
+.++.+||+|||+++.+.............+++.|+|||++.+..++.++|||||||++|||+| |+.||.......
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--- 313 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 313 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---
Confidence 9999999999999997754443333445567889999999999999999999999999999999 999987632211
Q ss_pred hhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 688 KHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 688 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
....+........ ...+...+.+++..||+.+|++||++.|+++.|++++...+
T Consensus 314 -----------~~~~~~~~~~~~~------~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 314 -----------LFKLLKEGHRMDK------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp -----------HHHHHHTTCCCCC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred -----------HHHHHhcCCCCCC------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1111211111110 01235568999999999999999999999999998876543
No 28
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.1e-41 Score=355.65 Aligned_cols=250 Identities=27% Similarity=0.320 Sum_probs=207.6
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
.++|+..+.||+|+||+||+|.. .+|+.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999975 57899999999766545567788999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCcc
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSM 632 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 632 (763)
+++|+|.+++... .++...+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 9999999999765 488999999999999999999 778999999999999999999999999999987653322
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCcc
Q 046240 633 TQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPE 712 (763)
Q Consensus 633 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 712 (763)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........... +..... ....
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-------------~~~~~~-~~~~ 237 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-------------IATNGT-PELQ 237 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-------------HHHHCS-CCCS
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-------------HHhCCC-CCCC
Confidence 23446799999999999999999999999999999999999999976432211111 111100 0000
Q ss_pred ccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 713 KDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 713 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. .+.+...+.+++.+||+.||++|||++|+++
T Consensus 238 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 238 N----PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp C----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C----ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 1123456889999999999999999999986
No 29
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.3e-41 Score=354.56 Aligned_cols=261 Identities=25% Similarity=0.379 Sum_probs=213.8
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
.++|...+.||+|+||+||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 367889999999999999999764 6899999998766566678899999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCcc
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSM 632 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 632 (763)
+++|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL---HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 999999999988666799999999999999999999 77899999999999999999999999999998764332211
Q ss_pred ------------ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHH
Q 046240 633 ------------TQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLM 700 (763)
Q Consensus 633 ------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 700 (763)
......||+.|+|||++.+..++.++|||||||++|||++|..|+......... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~--------~~~~~~ 237 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--------FGLNVR 237 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT--------SSBCHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH--------Hhhhhh
Confidence 111457899999999999999999999999999999999999998653221110 011122
Q ss_pred HHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccc
Q 046240 701 EVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFV 755 (763)
Q Consensus 701 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~ 755 (763)
......... .+...+.+++..||+.||++||++.++++.|+++..
T Consensus 238 ~~~~~~~~~----------~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 238 GFLDRYCPP----------NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp HHHHHTCCT----------TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccccCCC----------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 222222111 123457899999999999999999999999887654
No 30
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.5e-41 Score=396.55 Aligned_cols=341 Identities=21% Similarity=0.277 Sum_probs=291.7
Q ss_pred CCChhhHHHHHHHHHhccCCCCcccccCCCCCC-----CC--Ccc------------cceeecCCCCceEEEEecCCCCC
Q 046240 30 SNITTDQQALLALEAHISYDPTNLLAQNWTSNT-----SV--CNW------------IGITCDVNSHRVTALNISSLNLQ 90 (763)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~L~L~~~~l~ 90 (763)
+....|+.||++||+++. +| +|..+. ++ |.| .||+|+. .++|+.|+|++|++.
T Consensus 265 ~~~~~d~~ALl~~k~~l~-~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALD-GK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CHHHHHHHHHHHHHHHTT-GG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred ccchHHHHHHHHHHHHcC-CC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 345689999999999985 44 575443 55 999 9999986 589999999999999
Q ss_pred CcCCcccCCCCCCCEEEc-CCCcccCC-----------------------------------------------------
Q 046240 91 GEIPHEIGYLPSLTKLAL-GYNSLVGN----------------------------------------------------- 116 (763)
Q Consensus 91 ~~~~~~~~~l~~L~~L~L-~~n~l~~~----------------------------------------------------- 116 (763)
|.+|++|++|++|++|+| ++|.+++.
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 88876433
Q ss_pred ------------------CccccCccccccccCCCccEEEcccccccc-----------------cCCCccc--CCCCCC
Q 046240 117 ------------------NSLSGSLPSRIDLALPNVKALSLAYNRFSG-----------------TIQSPIT--NASKLT 159 (763)
Q Consensus 117 ------------------~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~-----------------~~p~~~~--~l~~L~ 159 (763)
|.+.+ ||..+. ++++|++|+|++|+|++ .+|..++ ++++|+
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~-~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQ-RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGG-GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccchhhceeccccCcccc-hhHHHh-cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 33444 887754 89999999999999998 3899887 999999
Q ss_pred eeeecCcccccccccccCCCCchhhhhhhhhccCCc-ccc-cCCccccccc------ccccEEEeecCcccccccc--cc
Q 046240 160 ILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNP-LNG-ILPSSIVNLS------ISLERLYISNCSITGNIPQ--VM 229 (763)
Q Consensus 160 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~-l~~-~~p~~~~~l~------~~L~~L~L~~N~l~~~~~~--~~ 229 (763)
+|+|++|++.+.+|..|+++++|+.|+ +++|+ +++ .+|..+.++. ++|++|+|++|+++ .+|. .|
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~----Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLN----IACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEE----CTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEE----CcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 999999999999999999999999999 88998 998 8898777653 48999999999999 8888 99
Q ss_pred CCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCc-ccEEEcccccccccCCcccCCC
Q 046240 230 GNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKV-VVEINLSRNNFSGDIPATIGGL 308 (763)
Q Consensus 230 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l 308 (763)
+++++|+.|+|++|+++ .+| .|..+++ |+.|+|++|+++ .+|. .+.++++ |+.|+|++|+++ .+|..+..+
T Consensus 570 ~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~--L~~L~Ls~N~l~-~lp~--~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~ 641 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR-HLE-AFGTNVK--LTDLKLDYNQIE-EIPE--DFCAFTDQVEGLGFSHNKLK-YIPNIFNAK 641 (876)
T ss_dssp TTCTTCCEEECTTSCCC-BCC-CCCTTSE--ESEEECCSSCCS-CCCT--TSCEECTTCCEEECCSSCCC-SCCSCCCTT
T ss_pred hcCCCCCEEECCCCCcc-cch-hhcCCCc--ceEEECcCCccc-cchH--HHhhccccCCEEECcCCCCC-cCchhhhcc
Confidence 99999999999999999 888 8999977 999999999999 8888 7899999 999999999999 788888877
Q ss_pred cC--ccEEEccCccccCcccccc---c--ccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCc--
Q 046240 309 KD--VQNISLPYNRLEGPIPESF---G--YLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPF-- 379 (763)
Q Consensus 309 ~~--L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-- 379 (763)
+. |+.|+|++|++++.+|... . .+++|+.|+|++|+++.+++..+..+++|+.|+|++|+++..++.....
T Consensus 642 ~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~ 721 (876)
T 4ecn_A 642 SVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKD 721 (876)
T ss_dssp CSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTT
T ss_pred ccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccc
Confidence 65 9999999999998766422 2 3458999999999999876666778999999999999999444433222
Q ss_pred ------cccccccccCCCcc
Q 046240 380 ------ANFTAKSFMGNEKL 393 (763)
Q Consensus 380 ------~~l~~~~~~~n~~~ 393 (763)
+.+..+++.+|...
T Consensus 722 ~~l~nl~~L~~L~Ls~N~L~ 741 (876)
T 4ecn_A 722 GNYKNTYLLTTIDLRFNKLT 741 (876)
T ss_dssp SCCTTGGGCCEEECCSSCCC
T ss_pred ccccccCCccEEECCCCCCc
Confidence 27888888888544
No 31
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=356.84 Aligned_cols=261 Identities=26% Similarity=0.435 Sum_probs=212.1
Q ss_pred HhccCcCceecccCCceEEEEEec----CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD----DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
.++|.+.+.||+|+||.||+|... .+..||||+++.. .....+.+.+|++++++++||||+++++++...+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467889999999999999999774 3456999999765 33456778999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 9999999999999987666799999999999999999999 7789999999999999999999999999999887533
Q ss_pred CCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 629 DQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 629 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||........ .+.+...
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--------------~~~~~~~ 270 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV--------------ISSVEEG 270 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--------------HHHHHTT
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH--------------HHHHHcC
Confidence 221 22233456788999999988899999999999999999999 9999976432211 1111111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
...... ..+...+.+++..||+.||++||++.+|++.|+.++...
T Consensus 271 ~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 271 YRLPAP------MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp CCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred CCCCCC------CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 111101 123556899999999999999999999999999887764
No 32
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.5e-40 Score=351.20 Aligned_cols=282 Identities=31% Similarity=0.446 Sum_probs=224.2
Q ss_pred ccCCCChHHHHHHHhccCcC------ceecccCCceEEEEEecCCceEEEEEeehhh----HHHHHHHHHHHHHHHhCCC
Q 046240 461 TKRRLPYQDLSRATNRFGRD------NLIGIGSFGYVYKAELDDGIEVAIKVFHQEC----ARAMKSFEVECEVMKNIRH 530 (763)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h 530 (763)
....+++.++..++++|... +.||+|+||.||+|.. +++.||+|++.... ....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 44668899999999988877 8999999999999987 47899999986431 2345778999999999999
Q ss_pred CccceEEeeeecCCceEEEEEccCCCChhhhhccC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe
Q 046240 531 RNLVKIISGCSNDDFKALVLEYMPNGSLDIFLYSS--TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL 608 (763)
Q Consensus 531 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll 608 (763)
|||+++++++...+..++||||+++++|.+++... ...+++..+..++.|+++||.|| |+.+|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL---HENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999998643 33689999999999999999999 67899999999999999
Q ss_pred cCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhh
Q 046240 609 DEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLK 688 (763)
Q Consensus 609 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 688 (763)
+.++.+||+|||+++...............|++.|+|||.+.+ .++.++||||||+++|||++|..||........ ..
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HH
Confidence 9999999999999987654333333345678999999998765 589999999999999999999999976432211 11
Q ss_pred hhhc--ccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccc
Q 046240 689 HWVN--GLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFV 755 (763)
Q Consensus 689 ~~~~--~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~ 755 (763)
.+.. ......+.+.+++.+... ...+...+.+++..||+.+|++||++.+|++.|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMNDA-------DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSCC-------CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhcccccccc-------chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1100 001112223333222111 12346678999999999999999999999999988653
No 33
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.2e-41 Score=354.17 Aligned_cols=274 Identities=24% Similarity=0.356 Sum_probs=212.9
Q ss_pred HhccCcCceecccCCceEEEEEe-----cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecC--Cce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-----DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSND--DFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 546 (763)
.++|++.+.||+|+||+||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46899999999999999999974 36889999999876666677899999999999999999999998543 468
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
++||||+++|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 999999999999999987666789999999999999999999 77899999999999999999999999999998775
Q ss_pred CCCCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhccc-CChh-HHHHH
Q 046240 627 GEDQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGL-LPVS-LMEVV 703 (763)
Q Consensus 627 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~i 703 (763)
..... .......++..|+|||++.+..++.++||||||+++|||+||..|+........ ...... .... ...+.
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHH---HHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHH---hhhcCccccchhHHHHH
Confidence 33221 223344577889999999989999999999999999999999999876433221 111111 1111 11222
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
.......... ....+...+.+++..||+.+|++|||+.++++.|+++..+
T Consensus 243 ~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 243 ELLKNNGRLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHTTCCCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhccCcCC---CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 2221111111 1123456789999999999999999999999999987654
No 34
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.6e-40 Score=350.89 Aligned_cols=260 Identities=29% Similarity=0.411 Sum_probs=203.4
Q ss_pred HHhccCcCceecccCCceEEEEEecCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
..++|.+.+.||+|+||+||+|.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 357899999999999999999977 48899999986442 344567889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 551 EYMPNGSLDIFLYSSTC--MLDIFQRLNIMIDVASALEYLNFRHTTP--IIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
||+++|+|.+++..... .+++..+..++.|+++||+|| |+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL---HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH---HTSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH---HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999976542 488999999999999999999 6777 9999999999999999999999999998653
Q ss_pred CCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+...
T Consensus 191 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~--------------~~~~~~ 254 (309)
T 3p86_A 191 STF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV--------------AAVGFK 254 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH--------------HHHHHS
T ss_pred ccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------------HHHHhc
Confidence 221 2234467899999999999999999999999999999999999999764322211 011100
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
... ... ...+...+.+++..||+.+|++|||+.++++.|++.+...
T Consensus 255 ~~~-~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 255 CKR-LEI----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCC-CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCC-CCC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 000 000 0123456889999999999999999999999999887763
No 35
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=8.3e-42 Score=371.25 Aligned_cols=259 Identities=26% Similarity=0.371 Sum_probs=212.4
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|...+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 468899999999999999999875 78999999987542 3344568899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++|+|.+++...+..+++.....++.|+++||+|| |+++|+||||||+||+++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 9999999999987665689999999999999999999 7789999999999999999999999999999875432221
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.......++..|+|||.+.+..++.++|||||||++|||+| |..||....... ..+.+.+....
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--------------~~~~~~~~~~~- 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--------------TREFVEKGGRL- 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--------------HHHHHHTTCCC-
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcCCCC-
Confidence 12222345778999999988899999999999999999999 999997643221 11222211111
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccc
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFV 755 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~ 755 (763)
+. ++.++..+.+++..||+.+|++|||+.++++.|+++..
T Consensus 335 ~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 PC-----PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC-----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 10 11235578899999999999999999999999987754
No 36
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1e-40 Score=354.53 Aligned_cols=262 Identities=23% Similarity=0.271 Sum_probs=212.4
Q ss_pred cCCCChHHHHHHHhc----------cCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCC
Q 046240 462 KRRLPYQDLSRATNR----------FGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRH 530 (763)
Q Consensus 462 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h 530 (763)
...++++++..+++. |...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 345777888777653 677789999999999999775 799999999986654556778899999999999
Q ss_pred CccceEEeeeecCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC
Q 046240 531 RNLVKIISGCSNDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE 610 (763)
Q Consensus 531 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~ 610 (763)
|||+++++++...+..++||||+++++|.+++... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYL---HAQGVIHRDIKSDSILLTL 176 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECT
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECC
Confidence 99999999999999999999999999999998754 489999999999999999999 6789999999999999999
Q ss_pred CCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhh
Q 046240 611 DMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHW 690 (763)
Q Consensus 611 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 690 (763)
++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-~--- 250 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-M--- 250 (321)
T ss_dssp TCCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-H---
T ss_pred CCcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H---
Confidence 99999999999987653322 23445799999999999999999999999999999999999999976322111 0
Q ss_pred hcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 691 VNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 691 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+ ..... +.. .........+.+++.+|++.||++||++.++++
T Consensus 251 ---------~~~-~~~~~--~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 ---------KRL-RDSPP--PKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---------HHH-HHSSC--CCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---------HHH-hcCCC--CCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011 11100 000 001112456889999999999999999999986
No 37
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.3e-40 Score=344.44 Aligned_cols=259 Identities=27% Similarity=0.395 Sum_probs=213.6
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
.++|++.+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 468999999999999999999998888999999975432 2356889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCccc
Q 046240 554 PNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMT 633 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 633 (763)
++++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-EE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-hc
Confidence 99999999987665689999999999999999999 778999999999999999999999999999987653322 22
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCcc
Q 046240 634 QTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPE 712 (763)
Q Consensus 634 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 712 (763)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......... .+........+.
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-------------~~~~~~~~~~~~ 228 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL-------------KVSQGHRLYRPH 228 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-------------HHHTTCCCCCCT
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH-------------HHHcCCCCCCCC
Confidence 334556788999999988889999999999999999999 999997643322111 011100011111
Q ss_pred ccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 713 KDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 713 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
.....+.+++..|++.+|++|||+.++++.|+++.+++
T Consensus 229 -------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 229 -------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred -------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 12346889999999999999999999999999987765
No 38
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.3e-41 Score=345.67 Aligned_cols=258 Identities=25% Similarity=0.381 Sum_probs=213.1
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
.++|+..+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 367899999999999999999988889999999975532 2356889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCccc
Q 046240 554 PNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMT 633 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 633 (763)
++++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHH---HhCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccc
Confidence 99999999987766789999999999999999999 78899999999999999999999999999998764221 122
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCcc
Q 046240 634 QTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPE 712 (763)
Q Consensus 634 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 712 (763)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||........ .+.+.........
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~--------------~~~~~~~~~~~~~ 229 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--------------VEDISTGFRLYKP 229 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------------HHHHHTTCCCCCC
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH--------------HHHHhcCccCCCC
Confidence 334556788999999988899999999999999999999 9999976332211 1111111111111
Q ss_pred ccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 713 KDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 713 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
. .....+.+++..|++.+|++||++.++++.|+++.++
T Consensus 230 ~------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 R------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp T------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C------cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0 1245688999999999999999999999999987654
No 39
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-40 Score=361.17 Aligned_cols=260 Identities=26% Similarity=0.472 Sum_probs=202.2
Q ss_pred HhccCcCceecccCCceEEEEEec----CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD----DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
.++|.+.+.||+|+||.||+|... ++..||||+++.. .....+.+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 368999999999999999999764 5778999999754 23456788999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999987766799999999999999999999 6789999999999999999999999999999876533
Q ss_pred CCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 629 DQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 629 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ..+.+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--------------~~~~i~~~ 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--------------VIKAVDEG 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--------------HHHHHHTT
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcC
Confidence 221 12223345778999999998999999999999999999998 999986533221 11222222
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
...... ..+...+.+++..||+.+|++||++.+|+++|+++...
T Consensus 267 ~~~~~~------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 267 YRLPPP------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp EECCCC------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCC------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 111111 12355689999999999999999999999999887665
No 40
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.8e-40 Score=352.90 Aligned_cols=247 Identities=25% Similarity=0.301 Sum_probs=204.8
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.++|.+.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35799999999999999999976 57999999999754 2345667889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++|+|.+++...+ .++......++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYC---HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 9999999999987654 588999999999999999999 77899999999999999999999999999998764332
Q ss_pred ccccccccccccccCccccCCCCCC-cchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVS-TRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
......||+.|+|||++.+..+. .++||||+||++|||++|+.||........ .+.+......
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--------------~~~i~~~~~~ 232 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL--------------RERVLRGKYR 232 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------------HHHHHHCCCC
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH--------------HHHHHhCCCC
Confidence 23456799999999999887765 799999999999999999999976432211 1111111111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.|. .....+.+++.+|+..||++|||++|+++
T Consensus 233 ~p~-------~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 233 IPF-------YMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CCT-------TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CCC-------CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111 12445789999999999999999999986
No 41
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.5e-40 Score=369.62 Aligned_cols=323 Identities=21% Similarity=0.227 Sum_probs=284.8
Q ss_pred CCCcccc--eeecCCC--------CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCC
Q 046240 63 SVCNWIG--ITCDVNS--------HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALP 132 (763)
Q Consensus 63 ~~c~w~g--v~c~~~~--------~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~ 132 (763)
..|.|.+ |.|+... .++++|+|++|.+++..|..|+++++|++|+|++|.+. +.++...|.+++
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~------~~i~~~~~~~l~ 79 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPG------LVIRNNTFRGLS 79 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTT------CEECTTTTTTCT
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCccc------ceECcccccccc
Confidence 4566555 7776532 67999999999999988999999999999999999885 578888888999
Q ss_pred CccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccc--cCCCCchhhhhhhhhccCCcccccCCcc-cccccc
Q 046240 133 NVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNT--IGNLRNIEWLGLVIGLIGNPLNGILPSS-IVNLSI 209 (763)
Q Consensus 133 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~~l~~n~l~~~~p~~-~~~l~~ 209 (763)
+|++|+|++|++++..|..|.++++|++|+|++|++++..+.. |.++++|++|+ +++|++++..|.. +.+++
T Consensus 80 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~----L~~n~l~~~~~~~~~~~l~- 154 (455)
T 3v47_A 80 SLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLV----LRDNNIKKIQPASFFLNMR- 154 (455)
T ss_dssp TCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEE----CCSSBCCSCCCCGGGGGCT-
T ss_pred cCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEE----CCCCccCccCcccccCCCC-
Confidence 9999999999999999999999999999999999999855544 99999999999 8899999998887 66777
Q ss_pred cccEEEeecCccccccccccCCc----------------------------------cccceeecccccccCCCCccccc
Q 046240 210 SLERLYISNCSITGNIPQVMGNL----------------------------------SIFLLLDLELNKLTGPIPVTFGR 255 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~~~~~~l----------------------------------~~L~~L~L~~N~l~~~~p~~~~~ 255 (763)
+|++|+|++|++++..+..+..+ ++|++|+|++|++++..|..+..
T Consensus 155 ~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 155 RFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp TCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHH
T ss_pred cccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhc
Confidence 99999999999999888877655 67888888888887655544422
Q ss_pred c-------------------------------------CCCCccEEEecCCccccCCCCccccccCCcccEEEccccccc
Q 046240 256 L-------------------------------------QNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFS 298 (763)
Q Consensus 256 l-------------------------------------~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~ 298 (763)
. ..++|++|++++|++++.+|. .+..+++|++|+|++|+++
T Consensus 235 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~Ls~n~l~ 312 (455)
T 3v47_A 235 AIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKS--VFSHFTDLEQLTLAQNEIN 312 (455)
T ss_dssp HTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTT--TTTTCTTCCEEECTTSCCC
T ss_pred cccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchh--hcccCCCCCEEECCCCccc
Confidence 1 113489999999999988888 7899999999999999999
Q ss_pred ccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC-C
Q 046240 299 GDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG-G 377 (763)
Q Consensus 299 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~ 377 (763)
+..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|+++++.|..|..+++|++|+|++|++++.++.. .
T Consensus 313 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 392 (455)
T 3v47_A 313 KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFD 392 (455)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhc
Confidence 999999999999999999999999888999999999999999999999999999999999999999999999877755 5
Q ss_pred CccccccccccCCCcccCCCC
Q 046240 378 PFANFTAKSFMGNEKLCGLPH 398 (763)
Q Consensus 378 ~~~~l~~~~~~~n~~~c~~p~ 398 (763)
.++.+..+++.+|++.|+||.
T Consensus 393 ~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 393 RLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TCTTCCEEECCSSCBCCCTTT
T ss_pred cCCcccEEEccCCCcccCCCc
Confidence 678999999999999999983
No 42
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-40 Score=351.58 Aligned_cols=251 Identities=18% Similarity=0.243 Sum_probs=207.4
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
.++|.+.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999765 68899999987543 3346688999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC--CCcEEEeeecCceecCCCCC
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE--DMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~ 630 (763)
+++|+|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++. ++.+||+|||+++.+....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 999999999987666789999999999999999999 7789999999999999987 7899999999998875332
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
......||+.|+|||++.+..++.++|||||||++|||++|..||........ .. .+....
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~------------~i~~~~---- 219 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI-IE------------NIMNAE---- 219 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HH------------HHHHTC----
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH-HH------------HHHcCC----
Confidence 22345689999999999988899999999999999999999999976432211 11 111111
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.............++.+++.+|+..||++|||+.|+++
T Consensus 220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111223556889999999999999999999986
No 43
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-40 Score=348.27 Aligned_cols=263 Identities=26% Similarity=0.369 Sum_probs=209.6
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh---hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE---CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|++.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 36799999999999999999975 47899999998532 234467789999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||+++++|.+++...+ .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHA---HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999997654 589999999999999999999 77899999999999999999999999999998764322
Q ss_pred CccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 630 QSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||............... ..
T Consensus 166 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~-~~-------------- 229 (294)
T 4eqm_A 166 L-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD-SV-------------- 229 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSS-CC--------------
T ss_pred c-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhc-cC--------------
Confidence 1 2233456899999999999999999999999999999999999999874432221111111 11
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCC-CHHHHHHHHhhccccC
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRI-NAKCCNFVLCEQFVSN 757 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-s~~~v~~~L~~~~~~~ 757 (763)
+.........++..+.+++.+|++.||++|| +++++.+.|++.+..+
T Consensus 230 -~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 230 -PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp -CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred -CCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 1110111112355688999999999999999 8999999999888764
No 44
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-40 Score=355.60 Aligned_cols=269 Identities=23% Similarity=0.375 Sum_probs=211.6
Q ss_pred HHhccCcCceecccCCceEEEEEe------cCCceEEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCC
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL------DDGIEVAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDD 544 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 544 (763)
..++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457899999999999999999975 246689999997542 33467789999999999 8999999999999999
Q ss_pred ceEEEEEccCCCChhhhhccCCC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 046240 545 FKALVLEYMPNGSLDIFLYSSTC----------------------MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLK 602 (763)
Q Consensus 545 ~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk 602 (763)
..++||||+++|+|.+++..... .+++..+..++.|+++||+|| |+.+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHH---HHTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCC
Confidence 99999999999999999976532 378899999999999999999 77899999999
Q ss_pred CCCEEecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhh
Q 046240 603 SSNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMF 681 (763)
Q Consensus 603 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~ 681 (763)
|+||+++.++.+||+|||++................+|+.|+|||++.+..++.++|||||||++|||+| |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654433333445567889999999988899999999999999999998 999997632
Q ss_pred hhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCcccc
Q 046240 682 AAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSSEL 761 (763)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~~~ 761 (763)
... .....+......... ..+...+.+++..||+.||++||++.++++.|+.++.....+.
T Consensus 280 ~~~-------------~~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 340 (344)
T 1rjb_A 280 VDA-------------NFYKLIQNGFKMDQP------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAM 340 (344)
T ss_dssp CSH-------------HHHHHHHTTCCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-------
T ss_pred cHH-------------HHHHHHhcCCCCCCC------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHH
Confidence 211 112222222111111 1124568999999999999999999999999999999887776
Q ss_pred cC
Q 046240 762 YK 763 (763)
Q Consensus 762 ~~ 763 (763)
|+
T Consensus 341 ~~ 342 (344)
T 1rjb_A 341 YQ 342 (344)
T ss_dssp --
T ss_pred hc
Confidence 63
No 45
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.4e-40 Score=359.60 Aligned_cols=270 Identities=21% Similarity=0.359 Sum_probs=215.4
Q ss_pred CChHHHHHHHhccCcCceecccCCceEEEEEe------cCCceEEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceE
Q 046240 465 LPYQDLSRATNRFGRDNLIGIGSFGYVYKAEL------DDGIEVAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKI 536 (763)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l 536 (763)
....+.....++|.+.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 33444455678999999999999999999963 246889999997643 34456789999999999 79999999
Q ss_pred EeeeecCC-ceEEEEEccCCCChhhhhccCCC------------------------------------------------
Q 046240 537 ISGCSNDD-FKALVLEYMPNGSLDIFLYSSTC------------------------------------------------ 567 (763)
Q Consensus 537 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~------------------------------------------------ 567 (763)
++++.+.+ ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998765 48999999999999999976432
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 568 -----------------MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 568 -----------------~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
.+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 188899999999999999999 778999999999999999999999999999987654443
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
........+|+.|+|||++.+..++.++|||||||++|||+| |..||....... .....+......
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------------~~~~~~~~~~~~ 315 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------------EFCRRLKEGTRM 315 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-------------HHHHHHHHTCCC
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-------------HHHHHHHcCCCC
Confidence 334455678999999999998999999999999999999999 999997633221 111111111111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
... ..+...+.+++..||+.+|++||++.++++.|+++++.
T Consensus 316 ~~~------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 316 RAP------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 110 11245688999999999999999999999999987754
No 46
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.8e-40 Score=346.14 Aligned_cols=259 Identities=23% Similarity=0.389 Sum_probs=211.5
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
.++|.+.+.||+|+||.||+|...++..||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 568999999999999999999999888999999975532 2356889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCccc
Q 046240 554 PNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMT 633 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 633 (763)
++++|.+++......+++..+..++.|+++||.|| |+++|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 177 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTS 177 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCccceEEEcCCCCEEEccccccccccccc-ccc
Confidence 99999999987555799999999999999999999 77899999999999999999999999999998764221 112
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCcc
Q 046240 634 QTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPE 712 (763)
Q Consensus 634 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 712 (763)
.....+++.|+|||++.+..++.++||||||+++|||+| |+.||........ .+.+.........
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--------------~~~~~~~~~~~~~ 243 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--------------AEHIAQGLRLYRP 243 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--------------HHHHHTTCCCCCC
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--------------HHHHhcccCCCCC
Confidence 233456788999999988899999999999999999999 9999976432211 1111111111111
Q ss_pred ccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 713 KDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 713 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
. .....+.+++..||+.+|++||++.++++.|.+++.++
T Consensus 244 ~------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 H------LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp T------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred C------cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 1 12346889999999999999999999999999887665
No 47
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=357.99 Aligned_cols=261 Identities=26% Similarity=0.421 Sum_probs=214.8
Q ss_pred HhccCcCceecccCCceEEEEEec--------CCceEEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceEEeeeecC
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD--------DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKIISGCSND 543 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 543 (763)
.++|.+.+.||+|+||.||+|... .+..||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 468999999999999999999752 34579999997653 34557789999999999 899999999999999
Q ss_pred CceEEEEEccCCCChhhhhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe
Q 046240 544 DFKALVLEYMPNGSLDIFLYSST---------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL 608 (763)
Q Consensus 544 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll 608 (763)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|| |+.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCcceEEE
Confidence 99999999999999999997643 3589999999999999999999 77899999999999999
Q ss_pred cCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhh
Q 046240 609 DEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSL 687 (763)
Q Consensus 609 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 687 (763)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~--- 301 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--- 301 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence 9999999999999987754443334445567889999999999999999999999999999999 999987633221
Q ss_pred hhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 688 KHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 688 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
..+.+......... ..+...+.+++..||+.+|++||++.+|++.|++++...
T Consensus 302 -----------~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 302 -----------LFKLLKEGHRMDKP------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp -----------HHHHHHTTCCCCCC------SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred -----------HHHHHHcCCCCCCC------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11112211111111 123456899999999999999999999999999887654
No 48
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.2e-40 Score=357.32 Aligned_cols=270 Identities=15% Similarity=0.169 Sum_probs=212.1
Q ss_pred HhccCcCceecccCCceEEEEEecC------CceEEEEEeehhhHHH-----------HHHHHHHHHHHHhCCCCccceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDD------GIEVAIKVFHQECARA-----------MKSFEVECEVMKNIRHRNLVKI 536 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~l 536 (763)
.++|.+.+.||+|+||.||+|...+ ++.||||++....... ......|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4689999999999999999997754 4789999987543211 1223456667778899999999
Q ss_pred EeeeecC----CceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEec--C
Q 046240 537 ISGCSND----DFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLD--E 610 (763)
Q Consensus 537 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~--~ 610 (763)
++++... ...++||||+ +++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYI---HEHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeEEecCCHHHEEEecCC
Confidence 9998764 4589999999 9999999987766799999999999999999999 678999999999999999 8
Q ss_pred CCcEEEeeecCceecCCCCCcc-----ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh
Q 046240 611 DMIAHLSDFGIAKLLSGEDQSM-----TQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL 685 (763)
Q Consensus 611 ~~~~kl~Dfgla~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 685 (763)
++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 8999999999998775332211 11334599999999999999999999999999999999999999986432221
Q ss_pred hhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 686 SLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 686 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
..............+++++++... .++.++.+++..||+.+|++||++.++++.|++++.+.
T Consensus 270 -~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 270 -YVRDSKIRYRENIASLMDKCFPAA---------NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp -HHHHHHHHHHHCHHHHHHHHSCTT---------CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHhhhhHHHHHHHhcccc---------cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 111111112234455555555321 12456889999999999999999999999999888763
No 49
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.2e-40 Score=346.62 Aligned_cols=265 Identities=27% Similarity=0.370 Sum_probs=201.4
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHh--CCCCccceEEeeeec----CCceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKN--IRHRNLVKIISGCSN----DDFKA 547 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~~~~ 547 (763)
.++|.+.+.||+|+||+||+|.. +++.||||++.... ...+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46899999999999999999987 58999999997543 3445566777766 789999999998654 34688
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCEEecCCCcEEEeeecCc
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFR-----HTTPIIHCDLKSSNVLLDEDMIAHLSDFGIA 622 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~-----h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 622 (763)
+||||+++|+|.+++... .+++..+..++.|+++||+|||.. ++++|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 589999999999999999999521 1889999999999999999999999999999
Q ss_pred eecCCCCCc--cccccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHcC----------CCCCchhhhhh
Q 046240 623 KLLSGEDQS--MTQTQTLATIGYMAPEYGIER------KVSTRSDIYSYGIMLIETFTR----------KKPADKMFAAE 684 (763)
Q Consensus 623 ~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slGv~l~elltg----------~~p~~~~~~~~ 684 (763)
+........ .......||+.|+|||++.+. .++.++|||||||++|||+|| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 876533221 112345799999999998776 456799999999999999999 66665422111
Q ss_pred hhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhc
Q 046240 685 LSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQ 753 (763)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~ 753 (763)
... ......+.................+...+.+++..||+.||++|||+.+|++.|+++
T Consensus 241 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSF---------EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCH---------HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cch---------hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 100 011111111111111111112234567899999999999999999999999999864
No 50
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=354.38 Aligned_cols=250 Identities=25% Similarity=0.327 Sum_probs=196.7
Q ss_pred HHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
..++|.+.+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357899999999999999999975 578999999987543 234567889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++|+|.+++...+ .+++..+..++.|+++||+|| |+.+|+||||||+||++++++.+||+|||++........
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYV---HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 9999999999986644 589999999999999999999 778999999999999999999999999999886543221
Q ss_pred ccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
.......||+.|+|||++.+..+ +.++||||+||++|||++|..||........ ...+......
T Consensus 164 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~-------------~~~i~~~~~~- 228 (347)
T 3zgw_A 164 -YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL-------------YKKIMRGKYD- 228 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHTCCC-
T ss_pred -ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-------------HHHHHcCCCC-
Confidence 22344579999999999988775 8999999999999999999999976332211 1111111111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. .....+.+++.+|++.||++|||++|+++
T Consensus 229 ~p~-------~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 229 VPK-------WLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCC-------CCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 111 12345788999999999999999999985
No 51
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-40 Score=354.27 Aligned_cols=262 Identities=28% Similarity=0.455 Sum_probs=212.5
Q ss_pred HHhccCcCceecccCCceEEEEEec------CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCc
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD------DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDF 545 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 545 (763)
..++|...+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578999999999999999999774 34789999997653 3446778999999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhccCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCC
Q 046240 546 KALVLEYMPNGSLDIFLYSST-----------------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLK 602 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk 602 (763)
.++||||+++|+|.+++.... ..+++..+..++.|+++||.|| |+++|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCC
Confidence 999999999999999987632 4688999999999999999999 77899999999
Q ss_pred CCCEEecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhh
Q 046240 603 SSNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMF 681 (763)
Q Consensus 603 ~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~ 681 (763)
|+||+++.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||+| |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999987643332223345568899999999988899999999999999999999 999997643
Q ss_pred hhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 682 AAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
.... ...+........+. .+...+.+++..||+.+|++||++.++++.|+++.++.
T Consensus 282 ~~~~-------------~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 HEEV-------------IYYVRDGNILACPE-------NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHH-------------HHHHHTTCCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred hHHH-------------HHHHhCCCcCCCCC-------CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 2211 01111111111111 23456899999999999999999999999999988774
No 52
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=5.3e-40 Score=347.90 Aligned_cols=264 Identities=24% Similarity=0.389 Sum_probs=216.9
Q ss_pred HhccCcCceecccCCceEEEEEe------cCCceEEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL------DDGIEVAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 545 (763)
.++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46899999999999999999974 356889999997553 23457789999999999 99999999999999999
Q ss_pred eEEEEEccCCCChhhhhccCCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe
Q 046240 546 KALVLEYMPNGSLDIFLYSSTC-----------------MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL 608 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll 608 (763)
.++||||+++|+|.+++..... .+++..+..++.|+++||.|| |+.+|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEE
Confidence 9999999999999999976432 488999999999999999999 77899999999999999
Q ss_pred cCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhh
Q 046240 609 DEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSL 687 (763)
Q Consensus 609 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 687 (763)
+.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||+| |..||.......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 255 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--- 255 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH---
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh---
Confidence 9999999999999987754433333344567889999999988899999999999999999999 999987632211
Q ss_pred hhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCcc
Q 046240 688 KHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSS 759 (763)
Q Consensus 688 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~ 759 (763)
.....+.......... .+...+.+++..|++.||++||++.++++.|++++.+.++
T Consensus 256 ----------~~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 311 (313)
T 1t46_A 256 ----------KFYKMIKEGFRMLSPE------HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311 (313)
T ss_dssp ----------HHHHHHHHTCCCCCCT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred ----------HHHHHhccCCCCCCcc------cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhc
Confidence 1222222222111111 1245689999999999999999999999999998876544
No 53
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.6e-40 Score=352.82 Aligned_cols=251 Identities=21% Similarity=0.264 Sum_probs=205.6
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHH------HHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECAR------AMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
.++|.+.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999765 6899999999754321 246788999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC----cEEEeeecCc
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM----IAHLSDFGIA 622 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~----~~kl~Dfgla 622 (763)
++||||+++|+|.+++.... .+++..+..++.|++.||.|| |+.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999999997643 689999999999999999999 778999999999999998876 7999999999
Q ss_pred eecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 623 KLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 623 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
+.+.... ......||+.|+|||++.+..++.++|||||||++|||++|..||........ ...
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~------------- 229 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN------------- 229 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH-------------
T ss_pred eEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-------------
Confidence 8865322 22345799999999999999999999999999999999999999976432211 111
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...................+.+++..|+..||++|||+.|+++
T Consensus 230 ---i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 230 ---ITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ---HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111111111223456889999999999999999999885
No 54
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.9e-40 Score=352.55 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=204.2
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 368999999999999999999765 78999999986443 2334668899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++|+|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999997653 589999999999999999999 7889999999999999999999999999999876433333
Q ss_pred cccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 632 MTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||............+.. ......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~------------~~~~~~ 229 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE------------KKTYLN 229 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHT------------TCTTST
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc------------ccccCC
Confidence 33345679999999999887765 77999999999999999999999764332222222211 111111
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+. ......+.+++.+|++.||++|||+.|+++
T Consensus 230 ~~------~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 230 PW------KKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TG------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cc------ccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11 112455789999999999999999999986
No 55
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=358.41 Aligned_cols=260 Identities=23% Similarity=0.367 Sum_probs=210.1
Q ss_pred HhccCcCceecccCCceEEEEEec------CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD------DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
.++|.+.+.||+|+||+||+|.+. +++.||||++... .......+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467899999999999999999743 4678999998644 234456788999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhccCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC---cEEEe
Q 046240 547 ALVLEYMPNGSLDIFLYSST------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM---IAHLS 617 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~---~~kl~ 617 (763)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|| |+++|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997532 3588999999999999999999 778999999999999999554 59999
Q ss_pred eecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCC
Q 046240 618 DFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLP 696 (763)
Q Consensus 618 Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 696 (763)
|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~------------ 294 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------------ 294 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------------
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------------
Confidence 9999986543332233344567999999999988999999999999999999998 999997643221
Q ss_pred hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 697 VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 697 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
..+.+.......+. ..+...+.+++..||+.+|++||++.+|++.|+.+.+.
T Consensus 295 --~~~~i~~~~~~~~~------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 295 --VLEFVTSGGRMDPP------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp --HHHHHHTTCCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --HHHHHHcCCCCCCC------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 11111111111111 12345688999999999999999999999999876654
No 56
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.6e-40 Score=352.18 Aligned_cols=253 Identities=20% Similarity=0.253 Sum_probs=204.4
Q ss_pred HHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHH-----HHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECAR-----AMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
..++|++.+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++...+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356899999999999999999966 47899999999754321 356789999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhccC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc---EEEeeec
Q 046240 547 ALVLEYMPNGSLDIFLYSS---TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI---AHLSDFG 620 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~---~kl~Dfg 620 (763)
++||||+++++|.+.+... ...+++..+..++.|+++||+|| |+++|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC---HDNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 9999999999998877542 23578999999999999999999 7789999999999999986654 9999999
Q ss_pred CceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHH
Q 046240 621 IAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLM 700 (763)
Q Consensus 621 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 700 (763)
+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 179 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~------------ 242 (351)
T 3c0i_A 179 VAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER--LFE------------ 242 (351)
T ss_dssp TCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH--HHH------------
T ss_pred ceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH--HHH------------
Confidence 9988753321 234457999999999999999999999999999999999999999763211 111
Q ss_pred HHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 701 EVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 701 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+..... .............+.+++.+|++.||++||++.++++
T Consensus 243 ~i~~~~~----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 243 GIIKGKY----KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHTCC----CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHcCCC----CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111111 1111111223556889999999999999999999985
No 57
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.2e-39 Score=344.54 Aligned_cols=269 Identities=24% Similarity=0.276 Sum_probs=204.0
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhH--HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECA--RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|++.+.||+|+||+||+|...+|+.||+|++..... .....+.+|++++++++||||+++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 478999999999999999999988899999999875432 234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++ +|.+++......++...+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC---HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9985 78777776666789999999999999999999 778999999999999999999999999999987643222
Q ss_pred cccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhhhhcccCChh------HHHH
Q 046240 632 MTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKHWVNGLLPVS------LMEV 702 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~------~~~~ 702 (763)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .........+.. ...+
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 2344578999999998876 56899999999999999999999999764332211 111111111110 0111
Q ss_pred HHhhcCCCcccc-HHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 703 VNKTLLSPPEKD-FAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 703 i~~~l~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
............ ......+..++.+++.+|++.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111111000000 0111123456889999999999999999999986
No 58
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=7.3e-40 Score=347.01 Aligned_cols=260 Identities=25% Similarity=0.406 Sum_probs=214.0
Q ss_pred HhccCcCceecccCCceEEEEEe------cCCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL------DDGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 57899999999999999999965 245789999997543 34567789999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhccCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCC
Q 046240 547 ALVLEYMPNGSLDIFLYSST-----------------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKS 603 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~ 603 (763)
++||||+++++|.+++.... ..+++..+..++.|+++||.|| |+.+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHH---HHTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHH---HHCCCcccccch
Confidence 99999999999999997643 2378899999999999999999 678999999999
Q ss_pred CCEEecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhh
Q 046240 604 SNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFA 682 (763)
Q Consensus 604 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~ 682 (763)
+||+++.++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987754443333344567889999999988889999999999999999999 9999976332
Q ss_pred hhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 683 AELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
.. ..+.+......... ..+...+.+++..|++.||++||++.++++.|++++.+
T Consensus 259 ~~--------------~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 ER--------------LFNLLKTGHRMERP------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GG--------------HHHHHHTTCCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH--------------HHHHhhcCCcCCCC------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 11 11222211111110 12345689999999999999999999999999988765
No 59
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.6e-40 Score=351.32 Aligned_cols=259 Identities=25% Similarity=0.411 Sum_probs=204.5
Q ss_pred HhccCcCceecccCCceEEEEEec-CCc----eEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGI----EVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKA 547 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 547 (763)
.++|+..+.||+|+||+||+|.+. +++ +||+|.+.... ....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 367999999999999999999754 444 46888876443 234577899999999999999999999998765 78
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCC
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 627 (763)
+|+||+++|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+..
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999999988767799999999999999999999 678999999999999999999999999999988754
Q ss_pred CCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 628 EDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 628 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
...........+|..|+|||++.+..++.++|||||||++|||+| |+.||....... ..+.+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------------~~~~~~~~ 235 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------------ISSILEKG 235 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------------HHHHHHTT
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--------------HHHHHHcC
Confidence 444333445567889999999999999999999999999999999 999997643221 22222222
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
...... ..+...+.+++..||+.+|++||++.++++.|+++.++
T Consensus 236 ~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 236 ERLPQP------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCCCC------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCCCC------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111111 11345688999999999999999999999999877654
No 60
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=6.6e-40 Score=345.88 Aligned_cols=262 Identities=27% Similarity=0.399 Sum_probs=204.1
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||.||+|.... .+|+|+++.. .....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 4689999999999999999998753 5899988643 2345677899999999999999999999875 456889999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 9999999999987667899999999999999999999 6789999999999999999999999999999865432333
Q ss_pred cccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 632 MTQTQTLATIGYMAPEYGI---ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
.......||+.|+|||++. +..++.++|||||||++|||++|+.||.......... ..+.....
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-------------~~~~~~~~ 255 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII-------------FMVGRGYA 255 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH-------------HHHHHTCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH-------------HHHhcCCC
Confidence 3334567999999999875 6678999999999999999999999997643222111 11111111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
. +.. ......+...+.+++..||+.+|++||++.++++.|+.....
T Consensus 256 ~-~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 256 S-PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp C-CCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred C-cch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 1 100 000112355689999999999999999999999998876554
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=346.81 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=205.7
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHH------HHHHHHHHHHHHHhCCCCccceEEeeeecCCc
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECAR------AMKSFEVECEVMKNIRHRNLVKIISGCSNDDF 545 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 545 (763)
..++|...+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 3467999999999999999999765 6899999998754211 35678899999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC----cEEEeeecC
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM----IAHLSDFGI 621 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~----~~kl~Dfgl 621 (763)
.++||||+++++|.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++ .+||+|||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYL---HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHH---HHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 999999999999999997643 689999999999999999999 778999999999999999887 899999999
Q ss_pred ceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHH
Q 046240 622 AKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLME 701 (763)
Q Consensus 622 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (763)
++.+.... ......||+.|+|||++.+..++.++|||||||++|||++|..||........ ...
T Consensus 165 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~------------ 228 (326)
T 2y0a_A 165 AHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN------------ 228 (326)
T ss_dssp CEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH------------
T ss_pred CeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHH------------
Confidence 98875332 22345799999999999999999999999999999999999999976332211 010
Q ss_pred HHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 702 VVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 702 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.. ................+.+++..|+..||++|||+.++++
T Consensus 229 ~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 229 VSA----VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHH----TCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHh----cCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 100 0111111111223456889999999999999999999986
No 62
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2e-39 Score=345.91 Aligned_cols=247 Identities=24% Similarity=0.309 Sum_probs=203.5
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|+..+.||+|+||+||+|... +|+.||+|+++... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 67999999999999999999765 68999999998653 223566789999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++|+|..++...+ .++......++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 159 (337)
T ss_dssp ECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-
Confidence 9999999999887643 588999999999999999999 77899999999999999999999999999998643222
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...... .
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-------------~~~i~~~~~~-~ 224 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-------------FELILMEEIR-F 224 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHCCCC-C
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH-------------HHHHHcCCCC-C
Confidence 123456799999999999999999999999999999999999999976332211 1111111111 1
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRI-----NAKCCNF 748 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~v~~ 748 (763)
+. ....++.+++.+|++.+|++|| +++|+++
T Consensus 225 p~-------~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 225 PR-------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CT-------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC-------CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11 1245678999999999999999 8888864
No 63
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=6e-40 Score=345.63 Aligned_cols=272 Identities=22% Similarity=0.367 Sum_probs=212.4
Q ss_pred HhccCcCceecccCCceEEEEEe-----cCCceEEEEEeehhhH-HHHHHHHHHHHHHHhCCCCccceEEeeeecC--Cc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-----DDGIEVAIKVFHQECA-RAMKSFEVECEVMKNIRHRNLVKIISGCSND--DF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 545 (763)
.++|+..+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|++++++++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35688999999999999999983 3688999999975432 3356788999999999999999999999876 66
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.++||||+++++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHh---hcCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 8999999999999999976666789999999999999999999 7789999999999999999999999999999887
Q ss_pred CCCCCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCCh-hHHHHH
Q 046240 626 SGEDQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPV-SLMEVV 703 (763)
Q Consensus 626 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~i 703 (763)
...... .......+|..|+|||++.+..++.++||||||+++|||++|..|+........ ......... ....+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFL---KMIGPTHGQMTVTRLV 253 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH---HHHCSCCGGGHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHh---hccCCcccccCHHHHH
Confidence 543321 223445688889999999888999999999999999999999999765432221 111111111 222222
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcc
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQF 754 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~ 754 (763)
........... ...+...+.+++..||+.||++|||+.++++.|++++
T Consensus 254 ~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 NTLKEGKRLPC---PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHTTCCCCC---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhccCCCCC---CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 22221111100 1123567899999999999999999999999998865
No 64
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.5e-40 Score=349.53 Aligned_cols=275 Identities=23% Similarity=0.309 Sum_probs=216.1
Q ss_pred HhccCcCceecccCCceEEEEEe-----cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeee--cCCce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-----DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCS--NDDFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 546 (763)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++. .....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 36899999999999999999984 468899999998766666778999999999999999999999886 45568
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
++||||+++++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 999999999999999987555689999999999999999999 77899999999999999999999999999999875
Q ss_pred CCCCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 627 GEDQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 627 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
..... .......++..|+|||++.+..++.++|||||||++|||++|+.||............... .......+...
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 256 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER--DVPALSRLLEL 256 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------CCHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccc--ccccHHHHHHH
Confidence 43322 2234456888899999998888999999999999999999999998765433222111111 11122222222
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
......... ...+...+.+++..|++.+|++||++.++++.|+++...
T Consensus 257 ~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 257 LEEGQRLPA---PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred hhcccCCCC---CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 211111110 112356789999999999999999999999999987664
No 65
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=359.18 Aligned_cols=254 Identities=21% Similarity=0.267 Sum_probs=205.1
Q ss_pred HHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
...++|.+.+.||+|+||+||+|.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3568899999999999999999965 578999999987542 3445678999999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEec---CCCcEEEeeecCceec
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLD---EDMIAHLSDFGIAKLL 625 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~---~~~~~kl~Dfgla~~~ 625 (763)
||||+++|+|.+.+.... .++......++.|+++||.|| |+++|+||||||+||+++ .++.+||+|||+++..
T Consensus 88 v~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~l---H~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHC---HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 999999999999887654 589999999999999999999 778999999999999998 4678999999999876
Q ss_pred CCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
..... ......||+.|+|||++.+..++.++||||+||++|||++|..||........ . ..+...
T Consensus 164 ~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~-~------------~~i~~~ 228 (444)
T 3soa_A 164 EGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL-Y------------QQIKAG 228 (444)
T ss_dssp CTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-H------------HHHHHT
T ss_pred cCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH-H------------HHHHhC
Confidence 53322 22346799999999999999999999999999999999999999976332211 1 111111
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.. ..+... .......+.+++..|++.||++|||+.|+++
T Consensus 229 ~~-~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 229 AY-DFPSPE---WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CC-CCCTTT---TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CC-CCCccc---cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11 111110 0112456889999999999999999999986
No 66
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-40 Score=355.27 Aligned_cols=252 Identities=18% Similarity=0.236 Sum_probs=207.4
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
.++|.+.+.||+|+||.||+|... +|+.||+|++..........+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999664 7899999999866555566789999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC--CCcEEEeeecCceecCCCCC
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE--DMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~ 630 (763)
+++|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++. ++.+||+|||+++.+....
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM---HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 999999999987666789999999999999999999 7789999999999999974 4789999999998875332
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
......||+.|+|||++.+..++.++|||||||++|||++|..||........ .. .+........
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-~~------------~i~~~~~~~~ 270 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQ------------NVKRCDWEFD 270 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HH------------HHHHCCCCCC
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH-HH------------HHHhCCCCCC
Confidence 22345689999999999999999999999999999999999999976432211 11 1111111111
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.. .......+.+++..|++.||++||++.++++
T Consensus 271 ~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 271 EDA----FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp SST----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 110 0112456889999999999999999999986
No 67
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.4e-39 Score=347.95 Aligned_cols=264 Identities=24% Similarity=0.441 Sum_probs=213.3
Q ss_pred HhccCcCceecccCCceEEEEEec--------CCceEEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceEEeeeecC
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD--------DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKIISGCSND 543 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 543 (763)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 478999999999999999999763 46789999997553 34567788999999999 899999999999999
Q ss_pred CceEEEEEccCCCChhhhhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe
Q 046240 544 DFKALVLEYMPNGSLDIFLYSST---------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL 608 (763)
Q Consensus 544 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll 608 (763)
+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|| |+.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCccceEEE
Confidence 99999999999999999997643 2378899999999999999999 77899999999999999
Q ss_pred cCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhh
Q 046240 609 DEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSL 687 (763)
Q Consensus 609 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~ 687 (763)
+.++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.......
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 267 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH---
Confidence 9999999999999988754433333344567889999999988889999999999999999999 999987632221
Q ss_pred hhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCccc
Q 046240 688 KHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSSE 760 (763)
Q Consensus 688 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~~ 760 (763)
....+......... ..+...+.+++..||+.+|++||++.++++.|++++.....+
T Consensus 268 -----------~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 268 -----------LFKLLKEGHRMDKP------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp -----------HHHHHHHTCCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred -----------HHHHHhcCCCCCCC------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 11111111111111 113456889999999999999999999999999887764433
No 68
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.3e-40 Score=345.31 Aligned_cols=262 Identities=28% Similarity=0.405 Sum_probs=197.9
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||+||+|.... .||+|++... .....+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4689999999999999999998753 5999998643 234567789999999999999999999965 4556899999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++++|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 9999999999977766799999999999999999999 7789999999999999999999999999999876433333
Q ss_pred cccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 632 MTQTQTLATIGYMAPEYGI---ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
.......||+.|+|||.+. +..++.++||||||+++|||++|+.||........ ..+.+.....
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------------~~~~~~~~~~ 243 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-------------IIEMVGRGSL 243 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-------------HHHHHHHTSC
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-------------HHHHhccccc
Confidence 3334567899999999876 66788899999999999999999999976432221 1111211111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
...... ....++..+.+++..|++.+|++||++.+++++|+++.++
T Consensus 244 ~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 244 SPDLSK--VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp CCCTTS--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred Ccchhh--ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 110000 0112356789999999999999999999999999988753
No 69
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=345.06 Aligned_cols=287 Identities=25% Similarity=0.334 Sum_probs=207.6
Q ss_pred ChHHHHHHHhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhC--CCCccceEEeeeecC
Q 046240 466 PYQDLSRATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNI--RHRNLVKIISGCSND 543 (763)
Q Consensus 466 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~ 543 (763)
+........++|.+.+.||+|+||.||+|... ++.||||++..... ....+|.+++... +||||+++++++...
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 33333445689999999999999999999876 89999999875432 3334455555554 899999999999877
Q ss_pred ----CceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCEEecCCCcE
Q 046240 544 ----DFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFR-----HTTPIIHCDLKSSNVLLDEDMIA 614 (763)
Q Consensus 544 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~-----h~~~ivH~dlk~~NIll~~~~~~ 614 (763)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||.. |..+|+||||||+||+++.++.+
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6789999999999999999765 489999999999999999999432 13399999999999999999999
Q ss_pred EEeeecCceecCCCCCc--cccccccccccccCccccCCCCCCcc------hhHHHHHHHHHHHHcCCCCCchhhhhhhh
Q 046240 615 HLSDFGIAKLLSGEDQS--MTQTQTLATIGYMAPEYGIERKVSTR------SDIYSYGIMLIETFTRKKPADKMFAAELS 686 (763)
Q Consensus 615 kl~Dfgla~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~slGv~l~elltg~~p~~~~~~~~~~ 686 (763)
||+|||+++.+...... .......||+.|+|||++.+...+.+ +|||||||++|||+||..|+.........
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999876433221 11234579999999999887766665 99999999999999995444321111100
Q ss_pred hhhhhcccCC-hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 687 LKHWVNGLLP-VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 687 ~~~~~~~~~~-~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
.......... ....+.+...............+.+...+.+++..||+.||++||++.+|++.|+++.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred HhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 0000000001 11222222111111111112223567889999999999999999999999999998887654
No 70
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-39 Score=342.94 Aligned_cols=265 Identities=15% Similarity=0.142 Sum_probs=212.7
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++.+ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999975 578999999986442 234578899999999 79999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc-----EEEeeecCceecC
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI-----AHLSDFGIAKLLS 626 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~-----~kl~Dfgla~~~~ 626 (763)
|+ +++|.+++...+..+++..+..++.|+++||+|| |+++|+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI---HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 9999999987666799999999999999999999 7889999999999999987766 9999999998875
Q ss_pred CCCCc-----cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHH
Q 046240 627 GEDQS-----MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLME 701 (763)
Q Consensus 627 ~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (763)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~----------~~~~~ 232 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK----------QKYER 232 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH----------HHHHH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH----------HHHHH
Confidence 43221 1234567999999999999999999999999999999999999999763211100 00011
Q ss_pred HHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 702 VVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 702 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
+......... ......++..+.+++..||+.+|++||++++|++.|++++.+.
T Consensus 233 ~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 233 IGEKKQSTPL---RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHHHHHHSCH---HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHhhccCccH---HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 1111110000 0011123567899999999999999999999999999888763
No 71
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=353.24 Aligned_cols=249 Identities=21% Similarity=0.283 Sum_probs=199.6
Q ss_pred cCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEccCC
Q 046240 477 FGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYMPN 555 (763)
Q Consensus 477 ~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 555 (763)
|...+.||+|+||.||+|.. .+|+.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 33467899999999999966 47899999999876555667889999999999999999999999999999999999999
Q ss_pred CChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe--cCCCcEEEeeecCceecCCCCCccc
Q 046240 556 GSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL--DEDMIAHLSDFGIAKLLSGEDQSMT 633 (763)
Q Consensus 556 g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll--~~~~~~kl~Dfgla~~~~~~~~~~~ 633 (763)
++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||++ +.++.+||+|||+++.+.... .
T Consensus 171 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~ 244 (373)
T 2x4f_A 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHM---HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---K 244 (373)
T ss_dssp CEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---B
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---c
Confidence 999998877666789999999999999999999 77899999999999999 567899999999999875332 2
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccc
Q 046240 634 QTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEK 713 (763)
Q Consensus 634 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 713 (763)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...++.........
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------------~~~i~~~~~~~~~~- 310 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-------------LNNILACRWDLEDE- 310 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHHTCCCSCSG-
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-------------HHHHHhccCCCChh-
Confidence 2345699999999999999999999999999999999999999976432211 11122111111111
Q ss_pred cHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 714 DFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 714 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. ......++.+++.+|++.+|++||++.|+++
T Consensus 311 ~---~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 311 E---FQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp G---GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred h---hccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 1123456899999999999999999999986
No 72
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.8e-39 Score=350.37 Aligned_cols=253 Identities=21% Similarity=0.340 Sum_probs=205.3
Q ss_pred HHHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
...++|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34678999999999999999999764 68999999997542 3445678899999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC---CcEEEeeecCceec
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED---MIAHLSDFGIAKLL 625 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~---~~~kl~Dfgla~~~ 625 (763)
||||+++|+|.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.+ +.+||+|||+++..
T Consensus 106 v~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 999999999998887643 588999999999999999999 77899999999999999865 45999999999876
Q ss_pred CCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
.... ......||+.|+|||++.+..++.++|||||||++|||++|..||........ ...+...
T Consensus 182 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~i~~~ 245 (362)
T 2bdw_A 182 NDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-------------YAQIKAG 245 (362)
T ss_dssp TTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHT
T ss_pred cCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-------------HHHHHhC
Confidence 5322 22346799999999999999999999999999999999999999976332211 0111111
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.. ..+.... ......+.+++.+|++.||++||++.++++
T Consensus 246 ~~-~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 246 AY-DYPSPEW---DTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CC-CCCTTGG---GGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CC-CCCcccc---cCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11 1111110 123456889999999999999999999875
No 73
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.4e-40 Score=349.53 Aligned_cols=264 Identities=19% Similarity=0.220 Sum_probs=210.7
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||+||+|.. .+|+.||||++.... ..+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36799999999999999999975 578999999987542 234578899999999 99999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc-----EEEeeecCceecC
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI-----AHLSDFGIAKLLS 626 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~-----~kl~Dfgla~~~~ 626 (763)
|+ +++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++. +||+|||+++.+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYV---HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 9999999987656799999999999999999999 6789999999999999998887 9999999999764
Q ss_pred CCCCcc-----ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHH
Q 046240 627 GEDQSM-----TQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLME 701 (763)
Q Consensus 627 ~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (763)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. ....
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--~~--------~~~~ 231 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--KE--------RYQK 231 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--HH--------HHHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--HH--------HHHH
Confidence 332211 12456799999999999999999999999999999999999999976321110 00 0111
Q ss_pred HHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 702 VVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 702 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
+.......... ...+.++ ++.+++..|++.+|++||++++|.+.|+++..+.
T Consensus 232 i~~~~~~~~~~---~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 232 IGDTKRATPIE---VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHHHHHHSCHH---HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHhhhccCCHH---HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 11111110000 0001123 7899999999999999999999999998777653
No 74
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=343.23 Aligned_cols=255 Identities=27% Similarity=0.380 Sum_probs=199.9
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
.++|++.+.||+|+||+||+|... ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 357889999999999999999876 788999998754 235678899999999999999999999874 478999999
Q ss_pred CCCChhhhhccCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc-EEEeeecCceecCCCCC
Q 046240 554 PNGSLDIFLYSSTC--MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI-AHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 554 ~~g~L~~~l~~~~~--~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~-~kl~Dfgla~~~~~~~~ 630 (763)
++|+|.+++..... .+++..+..++.|+++||+|||..|.++|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999986543 4788899999999999999997666689999999999999998876 799999999765321
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ..+.... .
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~------------~~~~~~~--~ 222 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM------------WAVHNGT--R 222 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH------------HHHHTTC--C
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH------------HHHhcCC--C
Confidence 2234689999999999999999999999999999999999999975322111100 0011100 0
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
+... ..+...+.+++.+||+.+|++|||++++++.|+++.+.
T Consensus 223 ~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 223 PPLI----KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp CCCB----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred CCcc----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1100 11245688999999999999999999999999877654
No 75
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.9e-40 Score=340.25 Aligned_cols=259 Identities=23% Similarity=0.361 Sum_probs=199.3
Q ss_pred HhccCcCceecccCCceEEEEEec----CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD----DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
.++|++.+.||+|+||.||+|... .+..||+|++... .....+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 468999999999999999999764 2457999998754 2344677899999999999999999999985 457899
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++++|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 9999999999999987666789999999999999999999 6789999999999999999999999999999876432
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
.. .......+++.|+|||.+.+..++.++|||||||++|||++ |..||........ ...+.....
T Consensus 170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-------------~~~i~~~~~ 235 (281)
T 1mp8_A 170 TY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-------------IGRIENGER 235 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-------------HHHHHTTCC
T ss_pred cc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-------------HHHHHcCCC
Confidence 21 12233456788999999988899999999999999999997 9999976432211 011111100
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
...+ ..+...+.+++..|++.+|++||++.++++.|++++++.
T Consensus 236 ~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 236 LPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp CCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCC-------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0011 123456889999999999999999999999999887654
No 76
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.7e-39 Score=344.89 Aligned_cols=271 Identities=25% Similarity=0.386 Sum_probs=212.9
Q ss_pred hcc-CcCceecccCCceEEEEEec-----CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecC--Cc
Q 046240 475 NRF-GRDNLIGIGSFGYVYKAELD-----DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSND--DF 545 (763)
Q Consensus 475 ~~~-~~~~~lg~G~~g~v~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 545 (763)
++| ++.+.||+|+||+||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 344 88999999999999988653 68899999998653 34567789999999999999999999999874 57
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.++||||+++|+|.+++.... +++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~L---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYL---HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEEcCCCCEEECCccccccc
Confidence 899999999999999997654 89999999999999999999 7789999999999999999999999999999987
Q ss_pred CCCCCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCCh-hHHHHH
Q 046240 626 SGEDQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPV-SLMEVV 703 (763)
Q Consensus 626 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~i 703 (763)
...... .......++..|+|||++.+..++.++|||||||++|||++|..||............+....... ...+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence 543321 223345678889999999988999999999999999999999999986543322222211111111 222222
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
......... ..+...+.+++..||+.+|++||++.++++.|+++.++
T Consensus 265 ~~~~~~~~~------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 265 ERGERLPRP------DKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp HTTCCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcccCCCCC------ccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 222211111 12356789999999999999999999999999887654
No 77
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9e-40 Score=347.84 Aligned_cols=262 Identities=24% Similarity=0.455 Sum_probs=195.0
Q ss_pred HHhccCcCceecccCCceEEEEEecC-C---ceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELDD-G---IEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
..++|.+.+.||+|+||.||+|.... + ..||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999997653 3 27999998754 234567889999999999999999999999877655
Q ss_pred ------EEEEEccCCCChhhhhccCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEE
Q 046240 547 ------ALVLEYMPNGSLDIFLYSST-----CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAH 615 (763)
Q Consensus 547 ------~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~k 615 (763)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHH---HcCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986422 2588999999999999999999 778999999999999999999999
Q ss_pred EeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhccc
Q 046240 616 LSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGL 694 (763)
Q Consensus 616 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 694 (763)
|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--------- 248 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--------- 248 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---------
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH---------
Confidence 999999987654443333344567889999999998999999999999999999999 9999876432211
Q ss_pred CChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 695 LPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 695 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
...+........+. .+...+.+++..|++.||++|||+.++++.|++++...
T Consensus 249 ----~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 249 ----YNYLIGGNRLKQPP-------ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----HHHHHTTCCCCCCT-------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----HHHHhcCCCCCCCC-------ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11111111111111 12456899999999999999999999999999887653
No 78
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.4e-39 Score=336.38 Aligned_cols=258 Identities=25% Similarity=0.377 Sum_probs=212.4
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
.++|...+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 367889999999999999999988889999999976532 2367889999999999999999999999999999999999
Q ss_pred CCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCccc
Q 046240 554 PNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMT 633 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 633 (763)
++++|.+++......+++..+..++.|+++||.|| |+.+++||||||+||+++.++.+||+|||+++...... ...
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEECCCCCEEEccccccccccccc-ccc
Confidence 99999999987766789999999999999999999 77899999999999999999999999999998764221 112
Q ss_pred cccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCcc
Q 046240 634 QTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPE 712 (763)
Q Consensus 634 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 712 (763)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||........ .+.+.........
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--------------~~~i~~~~~~~~~ 227 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--------------VEDISTGFRLYKP 227 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------------HHHHHTTCCCCCC
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH--------------HHHHhcCCcCCCC
Confidence 234457788999999988889999999999999999999 8999876332211 1111111110000
Q ss_pred ccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 713 KDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 713 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
. .....+.+++..|++.+|++||++.++++.|+++.++
T Consensus 228 ~------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 R------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp T------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred c------cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0 1245688999999999999999999999999987654
No 79
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=343.48 Aligned_cols=276 Identities=20% Similarity=0.258 Sum_probs=209.1
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCC--ceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD--FKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 549 (763)
.++|.+.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 367999999999999999999765 58999999997543 233566789999999999999999999997765 77999
Q ss_pred EEccCCCChhhhhccCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe----cCCCcEEEeeecCce
Q 046240 550 LEYMPNGSLDIFLYSSTC--MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL----DEDMIAHLSDFGIAK 623 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll----~~~~~~kl~Dfgla~ 623 (763)
|||+++++|.+++..... .+++..+..++.|+++||+|| |+.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976433 389999999999999999999 77899999999999999 788889999999998
Q ss_pred ecCCCCCccccccccccccccCccccC--------CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh---hhhhhhc
Q 046240 624 LLSGEDQSMTQTQTLATIGYMAPEYGI--------ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL---SLKHWVN 692 (763)
Q Consensus 624 ~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~---~~~~~~~ 692 (763)
.+.... ......||+.|+|||++. +..++.++|||||||++|||++|+.||........ .+.....
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 875432 223456899999999875 57889999999999999999999999975322111 1111111
Q ss_pred ccCChh---HHHHHHhhcCC--CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccc
Q 046240 693 GLLPVS---LMEVVNKTLLS--PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFV 755 (763)
Q Consensus 693 ~~~~~~---~~~~i~~~l~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~ 755 (763)
+..+.. ........... ...............+.+++..|++.||++|||++|+++...+...
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 100000 00000000000 0000011123456778999999999999999999999998775544
No 80
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.4e-39 Score=342.99 Aligned_cols=251 Identities=21% Similarity=0.268 Sum_probs=198.6
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCC------
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD------ 544 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 544 (763)
..++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4578999999999999999999775 79999999987432 334577899999999999999999999985543
Q ss_pred ---------------------------------------------------ceEEEEEccCCCChhhhhccCCC--CCCH
Q 046240 545 ---------------------------------------------------FKALVLEYMPNGSLDIFLYSSTC--MLDI 571 (763)
Q Consensus 545 ---------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~~~~ 571 (763)
..++||||+++++|.+++..... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999976432 4566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc----------cccccccccc
Q 046240 572 FQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS----------MTQTQTLATI 641 (763)
Q Consensus 572 ~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~----------~~~~~~~g~~ 641 (763)
..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++........ .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHH---HhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 67889999999999999 7789999999999999999999999999999987543211 1223457999
Q ss_pred cccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHH
Q 046240 642 GYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQC 721 (763)
Q Consensus 642 ~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 721 (763)
.|+|||++.+..++.++|||||||++|||++|..|+...... ......... +......
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~-------------------~~~~~~~~~---~~~~~~~ 298 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI-------------------ITDVRNLKF---PLLFTQK 298 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH-------------------HHHHHTTCC---CHHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH-------------------HHHhhccCC---CcccccC
Confidence 999999999999999999999999999999998775432111 000001010 1112223
Q ss_pred HHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 722 VLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 722 ~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...+.+++..|++.||++||++.|+++
T Consensus 299 ~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 299 YPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp CHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 456789999999999999999999986
No 81
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.4e-39 Score=362.40 Aligned_cols=259 Identities=24% Similarity=0.449 Sum_probs=211.8
Q ss_pred HHhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
..++|...+.||+|+||.||+|...++..||||+++... ...+.+.+|+.++++++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 356889999999999999999999888999999997643 23567899999999999999999999986 5678999999
Q ss_pred cCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 553 MPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 553 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
+++|+|.+++.... ..+++..+..++.|+++||+|| |+++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~ 339 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-Y 339 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-H
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-e
Confidence 99999999997542 2578889999999999999999 67899999999999999999999999999998764221 1
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.......++..|+|||++....++.++|||||||++|||+| |+.||....... ..+.+......
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--------------~~~~i~~~~~~- 404 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--------------VIRALERGYRM- 404 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------------HHHHHHHTCCC-
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcCCCC-
Confidence 12233456788999999988899999999999999999999 999997643221 11111111111
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
+. +..++..+.+++..||+.+|++|||+++|++.|++.....
T Consensus 405 ~~-----~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 405 PR-----PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred CC-----CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 11 1124567899999999999999999999999999887653
No 82
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=348.23 Aligned_cols=243 Identities=24% Similarity=0.322 Sum_probs=196.2
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 548 (763)
.++|++.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|..+++.+ +||||+++++++...+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 478999999999999999999765 68999999998653 22346678899999988 69999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|..++...+ .+++..+..++.|++.||+|| |+++|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 999999999999987654 589999999999999999999 7789999999999999999999999999999864322
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+......
T Consensus 178 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-------------~~~i~~~~~~ 242 (353)
T 3txo_A 178 G--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL-------------FEAILNDEVV 242 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHCCCC
T ss_pred C--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH-------------HHHHHcCCCC
Confidence 2 233456799999999999988999999999999999999999999976432211 1112221111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINA 743 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~ 743 (763)
. +. .....+.+++..|++.+|++||++
T Consensus 243 ~-p~-------~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 243 Y-PT-------WLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp C-CT-------TSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred C-CC-------CCCHHHHHHHHHHhhhCHHHccCC
Confidence 1 11 124457899999999999999998
No 83
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-39 Score=338.34 Aligned_cols=244 Identities=23% Similarity=0.297 Sum_probs=203.4
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|++.+.||+|+||+||+|... +|+.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57999999999999999999765 789999999986532 23466788999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++|+|.+++.... .++......++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYL---HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence 9999999999997654 588999999999999999999 7889999999999999999999999999999876422
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...++......
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------------~~~i~~~~~~~- 222 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-------------YEKILNAELRF- 222 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHHCCCCC-
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-------------HHHHHhCCCCC-
Confidence 2345799999999999999999999999999999999999999976332211 11222221111
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRI-----NAKCCNF 748 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~v~~ 748 (763)
+. ....++.+++.+|+..||++|| +++++++
T Consensus 223 p~-------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 223 PP-------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CT-------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CC-------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11 1244678999999999999999 7888873
No 84
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-39 Score=348.49 Aligned_cols=263 Identities=24% Similarity=0.381 Sum_probs=212.4
Q ss_pred HHHhccCcCceecccCCceEEEEEec-CC-----ceEEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceEEeeeecC
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAELD-DG-----IEVAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKIISGCSND 543 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 543 (763)
...++|...+.||+|+||.||+|... ++ +.||+|++.... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 34578999999999999999999764 22 479999997553 34567789999999999 899999999999999
Q ss_pred CceEEEEEccCCCChhhhhccC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC
Q 046240 544 DFKALVLEYMPNGSLDIFLYSS-------------TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE 610 (763)
Q Consensus 544 ~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~ 610 (763)
+..++||||+++|+|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHH---hcCCcccCCcccceEEECC
Confidence 9999999999999999998653 23578899999999999999999 6789999999999999999
Q ss_pred CCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhh
Q 046240 611 DMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKH 689 (763)
Q Consensus 611 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~ 689 (763)
++.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||+| |..||.......
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----- 274 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS----- 274 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-----
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-----
Confidence 99999999999987654333333344567889999999988899999999999999999999 999987632211
Q ss_pred hhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 690 WVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 690 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
.....+.......... .+...+.+++..||+.+|++||++.++++.|++...+
T Consensus 275 --------~~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 275 --------KFYKLVKDGYQMAQPA------FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp --------HHHHHHHHTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------HHHHHHhcCCCCCCCC------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1122222221111111 1245688999999999999999999999999887654
No 85
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=8.7e-40 Score=347.78 Aligned_cols=267 Identities=24% Similarity=0.382 Sum_probs=215.1
Q ss_pred HHHHHHHhccCcCceecccCCceEEEEEec------CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeee
Q 046240 468 QDLSRATNRFGRDNLIGIGSFGYVYKAELD------DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGC 540 (763)
Q Consensus 468 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 540 (763)
++.....++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455688999999999999999999654 36789999997543 33456788999999999999999999999
Q ss_pred ecCCceEEEEEccCCCChhhhhccCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC
Q 046240 541 SNDDFKALVLEYMPNGSLDIFLYSST---------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED 611 (763)
Q Consensus 541 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~ 611 (763)
...+..++||||+++|+|.+++.... ..+++..+..++.|+++||.|| |+++|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL---NANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCCccCCCccceEEEcCC
Confidence 99999999999999999999986522 3468899999999999999999 77899999999999999999
Q ss_pred CcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhh
Q 046240 612 MIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHW 690 (763)
Q Consensus 612 ~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~ 690 (763)
+.+||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||........ .
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~--- 250 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-L--- 250 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH-H---
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH-H---
Confidence 9999999999987643332223344567889999999988899999999999999999999 8999876432211 0
Q ss_pred hcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 691 VNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 691 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
..+........+. .+...+.+++..|++.+|++||++.++++.|++.+.+.
T Consensus 251 ---------~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 251 ---------RFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp ---------HHHHTTCCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred ---------HHHHcCCcCCCCC-------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 1111111111111 23456889999999999999999999999999887754
No 86
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.7e-39 Score=339.95 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=204.6
Q ss_pred HhccCcCceecccCCceEEEEEec-CC-------ceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DG-------IEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 545 (763)
.++|.+.+.||+|+||+||+|... ++ ..||+|++........+.+.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 367899999999999999999654 33 4799999987666667789999999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc--------EEEe
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI--------AHLS 617 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~--------~kl~ 617 (763)
.++||||+++|+|.+++......+++..+..++.|+++||.|| |+++|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---hhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 9999999999999999987766689999999999999999999 7889999999999999998877 9999
Q ss_pred eecCceecCCCCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCC-CCCchhhhhhhhhhhhhcccC
Q 046240 618 DFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRK-KPADKMFAAELSLKHWVNGLL 695 (763)
Q Consensus 618 Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~-~p~~~~~~~~~~~~~~~~~~~ 695 (763)
|||.+..... .....+++.|+|||++.+ ..++.++|||||||++|||++|. .|+....... ..
T Consensus 164 Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~-------- 228 (289)
T 4fvq_A 164 DPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KL-------- 228 (289)
T ss_dssp CCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HH--------
T ss_pred cCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HH--------
Confidence 9999875431 223457889999999887 77899999999999999999965 4444322111 00
Q ss_pred ChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 696 PVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 696 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
........ .+.. ....+.+++..||+.||++|||+.++++.|++++...
T Consensus 229 -----~~~~~~~~-~~~~-------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 229 -----QFYEDRHQ-LPAP-------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp -----HHHHTTCC-CCCC-------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred -----HHhhccCC-CCCC-------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 11111111 1111 1234789999999999999999999999999887653
No 87
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=337.68 Aligned_cols=248 Identities=25% Similarity=0.328 Sum_probs=195.2
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhH--------------------------HHHHHHHHHHHHHHh
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECA--------------------------RAMKSFEVECEVMKN 527 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~~ 527 (763)
++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 6799999999999999999966 4689999999864321 123567899999999
Q ss_pred CCCCccceEEeeeec--CCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCC
Q 046240 528 IRHRNLVKIISGCSN--DDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSN 605 (763)
Q Consensus 528 l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~N 605 (763)
++||||+++++++.. .+..++||||+++++|.+++.. ..+++..+..++.|+++||+|| |+.+|+||||||+|
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~N 167 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYL---HYQKIIHRDIKPSN 167 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHH
Confidence 999999999999986 5688999999999999887654 3589999999999999999999 77899999999999
Q ss_pred EEecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCC---CCcchhHHHHHHHHHHHHcCCCCCchhhh
Q 046240 606 VLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERK---VSTRSDIYSYGIMLIETFTRKKPADKMFA 682 (763)
Q Consensus 606 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slGv~l~elltg~~p~~~~~~ 682 (763)
|+++.++.+||+|||+++.+..... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 9999999999999999987653322 233457999999999987655 47889999999999999999999976322
Q ss_pred hhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 683 AELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
... ...+.......+.. ......+.+++.+||+.||++||++.|+++
T Consensus 246 ~~~--------------~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 MCL--------------HSKIKSQALEFPDQ-----PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHH--------------HHHHHHCCCCCCSS-----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHH--------------HHHHhcccCCCCCc-----cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 111 11111111111111 012456889999999999999999999864
No 88
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.5e-39 Score=363.91 Aligned_cols=259 Identities=24% Similarity=0.409 Sum_probs=214.0
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
.++|.+.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 457888999999999999999776 48899999997543 2356789999999999999999999999999999999999
Q ss_pred cCCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 553 MPNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 553 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
+++|+|.+++... ...+++..+..++.|+++||+|| |+++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-Y 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-E
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-e
Confidence 9999999999763 34689999999999999999999 77899999999999999999999999999998764332 1
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.......++..|+|||++.+..++.++|||||||++|||+| |..||...... ...+.+.+.....
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--------------~~~~~~~~~~~~~ 439 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------QVYELLEKDYRME 439 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------------GHHHHHHTTCCCC
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHHHcCCCCC
Confidence 22234456788999999988899999999999999999999 99998764321 1222222221111
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
. ...+...+.+++..||+.+|++||++.+|+++|+.++...
T Consensus 440 ~------~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 440 R------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred C------CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 1 1123567899999999999999999999999999987664
No 89
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.2e-39 Score=338.71 Aligned_cols=253 Identities=27% Similarity=0.409 Sum_probs=202.4
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHH-------HHHHHHHHHHHHHhCCCCccceEEeeeecCCc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECAR-------AMKSFEVECEVMKNIRHRNLVKIISGCSNDDF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 545 (763)
.++|+..+.||+|+||+||+|.. .+++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46899999999999999999976 47899999998643211 1267889999999999999999999997665
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEecCCCc-----EEEee
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTP--IIHCDLKSSNVLLDEDMI-----AHLSD 618 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~dlk~~NIll~~~~~-----~kl~D 618 (763)
++||||+++|+|.+++......+++..+..++.|+++||+|| |+.+ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM---QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHH---HhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 699999999999999877777899999999999999999999 6677 999999999999988776 99999
Q ss_pred ecCceecCCCCCccccccccccccccCcccc--CCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCC
Q 046240 619 FGIAKLLSGEDQSMTQTQTLATIGYMAPEYG--IERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLP 696 (763)
Q Consensus 619 fgla~~~~~~~~~~~~~~~~g~~~y~aPE~~--~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 696 (763)
||+++.... ......||+.|+|||++ ....++.++|||||||++|||++|+.||............
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~------- 240 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN------- 240 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHH-------
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHH-------
Confidence 999975432 23345789999999998 4556789999999999999999999999763322111111
Q ss_pred hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhc
Q 046240 697 VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQ 753 (763)
Q Consensus 697 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~ 753 (763)
.+...... +.. ...+...+.+++..||+.||++||++.++++.|+++
T Consensus 241 ----~~~~~~~~--~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 241 ----MIREEGLR--PTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ----HHHHSCCC--CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ----HHhccCCC--CCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11111111 100 112355689999999999999999999999999864
No 90
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.8e-40 Score=348.51 Aligned_cols=258 Identities=24% Similarity=0.355 Sum_probs=205.3
Q ss_pred hccCcCceecccCCceEEEEEec-CCce----EEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIE----VAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
++|.+.+.||+|+||+||+|... +++. ||+|++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 57889999999999999999754 4554 7888775432 223345678999999999999999999986 456889
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHH---HHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHH---HhCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 9999999999999987656788899999999999999999 7789999999999999999999999999999987655
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
..........++..|+|||++.+..++.++|||||||++|||+| |+.||....... ..+.+....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------------~~~~~~~~~ 234 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--------------VPDLLEKGE 234 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--------------HHHHHHTTC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--------------HHHHHHcCC
Confidence 44444455678889999999998899999999999999999999 999997633211 112222111
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
...... .+...+.+++..||+.+|++||++.++++.|+++...
T Consensus 235 ~~~~~~------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 235 RLAQPQ------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp BCCCCT------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCCCCC------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 111000 1234578999999999999999999999999887654
No 91
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.3e-39 Score=334.15 Aligned_cols=252 Identities=24% Similarity=0.355 Sum_probs=205.7
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecC--CceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSND--DFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 549 (763)
.++|.+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|+.++++++||||+++++++... +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 367899999999999999999886 8899999997542 34456789999999999999999999999877 788999
Q ss_pred EEccCCCChhhhhccCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 550 LEYMPNGSLDIFLYSSTC-MLDIFQRLNIMIDVASALEYLNFRHTTP--IIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
|||+++|+|.+++..... .+++..+..++.|+++||+|| |+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL---HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHH---TTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH---hcCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999987544 589999999999999999999 7777 9999999999999999999999998865432
Q ss_pred CCCCccccccccccccccCccccCCCCCCc---chhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHH
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIERKVST---RSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVV 703 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 703 (763)
.....+|+.|+|||.+.+..++. ++|||||||++|||++|+.||........... +.
T Consensus 165 -------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-------------~~ 224 (271)
T 3kmu_A 165 -------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK-------------VA 224 (271)
T ss_dssp -------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH-------------HH
T ss_pred -------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH-------------HH
Confidence 22346899999999988765544 79999999999999999999976433221111 11
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccc
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFV 755 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~ 755 (763)
..... +.. ...+...+.+++..||+.||++|||++++++.|+++.+
T Consensus 225 ~~~~~--~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 225 LEGLR--PTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HSCCC--CCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred hcCCC--CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11111 000 01134568999999999999999999999999998765
No 92
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.9e-39 Score=342.81 Aligned_cols=250 Identities=22% Similarity=0.261 Sum_probs=182.7
Q ss_pred CceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CCccceEEeeeecCCceEEEEEccCCCC
Q 046240 480 DNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIR-HRNLVKIISGCSNDDFKALVLEYMPNGS 557 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~ 557 (763)
.+.||+|+||+||+|... +++.||||++.... ...+.+|+.+++.+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999765 68999999997542 355678999999997 9999999999999999999999999999
Q ss_pred hhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC---cEEEeeecCceecCCCCCcccc
Q 046240 558 LDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM---IAHLSDFGIAKLLSGEDQSMTQ 634 (763)
Q Consensus 558 L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~---~~kl~Dfgla~~~~~~~~~~~~ 634 (763)
|.+++.... .+++..+..++.|+++||+|| |+++|+||||||+||+++.++ .+||+|||+++....... ..
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHM---HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--cc
Confidence 999997654 689999999999999999999 778999999999999997665 899999999987643322 22
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCcccc
Q 046240 635 TQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKD 714 (763)
Q Consensus 635 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 714 (763)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+++.+.........
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----------~~~~~~~~~~i~~~~~~~~ 236 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT----------CTSAVEIMKKIKKGDFSFE 236 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------------CCCHHHHHHHHTTTCCCCC
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc----------cccHHHHHHHHHcCCCCCC
Confidence 345689999999999999999999999999999999999999976432110 0112223333322222222
Q ss_pred HHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 715 FAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 715 ~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.........++.+++..|++.||++||+++++++
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 2222334667899999999999999999999874
No 93
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.8e-39 Score=342.77 Aligned_cols=269 Identities=22% Similarity=0.378 Sum_probs=215.4
Q ss_pred ChHHHHHHHhccCcCceecccCCceEEEEEe------cCCceEEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceEE
Q 046240 466 PYQDLSRATNRFGRDNLIGIGSFGYVYKAEL------DDGIEVAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKII 537 (763)
Q Consensus 466 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~ 537 (763)
.........++|.+.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.+++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3334444568999999999999999999964 356889999997643 33456788999999999 799999999
Q ss_pred eeeecCC-ceEEEEEccCCCChhhhhccCCC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCC
Q 046240 538 SGCSNDD-FKALVLEYMPNGSLDIFLYSSTC---------------MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDL 601 (763)
Q Consensus 538 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dl 601 (763)
+++...+ ..++||||+++++|.+++..... .+++..+..++.|+++||.|| |+.+|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHH---HHTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHH---HhCCcccccC
Confidence 9987755 58999999999999999976543 278899999999999999999 7789999999
Q ss_pred CCCCEEecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchh
Q 046240 602 KSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKM 680 (763)
Q Consensus 602 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~ 680 (763)
||+||+++.++.+||+|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||+| |..||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999987654433333445667899999999988899999999999999999998 99998763
Q ss_pred hhhhhhhhhhhcccCChhHHHHHHhhcC-CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 681 FAAELSLKHWVNGLLPVSLMEVVNKTLL-SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
.... .....+..... ..+. .+...+.+++..||+.+|++||++.++++.|+++++.+
T Consensus 255 ~~~~-------------~~~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 255 KIDE-------------EFCRRLKEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCSH-------------HHHHHHHHTCCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred chhH-------------HHHHHhccCccCCCCC-------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 2211 11111111111 1111 12446889999999999999999999999999887654
No 94
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.3e-39 Score=338.79 Aligned_cols=268 Identities=22% Similarity=0.267 Sum_probs=200.3
Q ss_pred hccCcCceecccCCceEEEEEecCCceEEEEEeehhhH--HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECA--RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
++|.+.+.||+|+||+||+|...+|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 47889999999999999999888899999999864422 2346778999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCcc
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSM 632 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 632 (763)
+++ +|.+++......++......++.|+++||+|| |+++|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC---HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-- 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc--
Confidence 986 89888877656789999999999999999999 778999999999999999999999999999987642221
Q ss_pred ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhh--hhcccCChhHHHHH-----H
Q 046240 633 TQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKH--WVNGLLPVSLMEVV-----N 704 (763)
Q Consensus 633 ~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~i-----~ 704 (763)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ......+.....+. +
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 2234568999999999875 46899999999999999999999999764332211111 00000000000000 0
Q ss_pred hhcCC-CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 705 KTLLS-PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 705 ~~l~~-~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..... .+.............+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 000000000112456789999999999999999999875
No 95
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.5e-41 Score=353.08 Aligned_cols=279 Identities=23% Similarity=0.306 Sum_probs=192.0
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHh--CCCCccceEEeeeecCC----ceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKN--IRHRNLVKIISGCSNDD----FKA 547 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~ 547 (763)
.++|.+.+.||+|+||.||+|... |+.||||++.... ...+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 368999999999999999999875 8899999987542 3456678888887 78999999999998776 789
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEeCCCCCCCEEecCCCcEEEeeecCc
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNF-----RHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIA 622 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~-----~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 622 (763)
+||||+++|+|.+++... .+++..+..++.|++.||+|||. .|+++|+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999999999664 37778889999999999999931 11899999999999999999999999999999
Q ss_pred eecCCCCCcc--ccccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhc--
Q 046240 623 KLLSGEDQSM--TQTQTLATIGYMAPEYGIER------KVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVN-- 692 (763)
Q Consensus 623 ~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~-- 692 (763)
+......... ......||+.|+|||++.+. .++.++|||||||++|||+||..|+.........+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 8764333221 12344799999999998765 4457899999999999999994443221110000000000
Q ss_pred ccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCcc
Q 046240 693 GLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSS 759 (763)
Q Consensus 693 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~ 759 (763)
.........+...........+.. ...+...+.+++..||+.||++|||+.+|+++|+++.++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~~ 301 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp CCCC-CHHHHTTSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC---
T ss_pred ccHHHHHHHHHHhhcCCCcccccc-chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhccc
Confidence 001111222222222222222221 224567899999999999999999999999999999887643
No 96
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.8e-39 Score=345.57 Aligned_cols=261 Identities=23% Similarity=0.258 Sum_probs=203.7
Q ss_pred HHHHHHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh-----HHHHHHHHHHHHHHHhCCCCccceEEeeee
Q 046240 468 QDLSRATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC-----ARAMKSFEVECEVMKNIRHRNLVKIISGCS 541 (763)
Q Consensus 468 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 541 (763)
.++....++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 98 (345)
T 3hko_A 19 GSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE 98 (345)
T ss_dssp BCHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred chhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence 45667789999999999999999999966 468899999997652 234577899999999999999999999999
Q ss_pred cCCceEEEEEccCCCChhhhhccC---------------------------------------CCCCCHHHHHHHHHHHH
Q 046240 542 NDDFKALVLEYMPNGSLDIFLYSS---------------------------------------TCMLDIFQRLNIMIDVA 582 (763)
Q Consensus 542 ~~~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~ia 582 (763)
+.+..++||||+++|+|.+++... ...+++..+..++.|++
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 999999999999999999988521 11234566778999999
Q ss_pred HHHHHHHhcCCCCeEeCCCCCCCEEecCCC--cEEEeeecCceecCCCCC--ccccccccccccccCccccCC--CCCCc
Q 046240 583 SALEYLNFRHTTPIIHCDLKSSNVLLDEDM--IAHLSDFGIAKLLSGEDQ--SMTQTQTLATIGYMAPEYGIE--RKVST 656 (763)
Q Consensus 583 ~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~--~~kl~Dfgla~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~--~~~~~ 656 (763)
+||+|| |+.+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||++.+ ..++.
T Consensus 179 ~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 179 SALHYL---HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHH---HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHH---HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 999999 778999999999999998776 899999999987643221 112345679999999998865 67899
Q ss_pred chhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccC
Q 046240 657 RSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMEL 736 (763)
Q Consensus 657 ~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~ 736 (763)
++|||||||++|||++|+.||........ ...++......... ........+.+++..|++.+
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~~~-------------~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~ 318 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADT-------------ISQVLNKKLCFENP----NYNVLSPLARDLLSNLLNRN 318 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHCCCCTTSG----GGGGSCHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChHHH-------------HHHHHhcccccCCc----ccccCCHHHHHHHHHHcCCC
Confidence 99999999999999999999976433221 11122211111111 11123456889999999999
Q ss_pred cCCCCCHHHHHH
Q 046240 737 PEKRINAKCCNF 748 (763)
Q Consensus 737 P~~Rps~~~v~~ 748 (763)
|++||++.++++
T Consensus 319 p~~Rps~~~~l~ 330 (345)
T 3hko_A 319 VDERFDAMRALQ 330 (345)
T ss_dssp TTTSCCHHHHHH
T ss_pred hhHCCCHHHHhc
Confidence 999999999986
No 97
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.8e-39 Score=333.12 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=193.6
Q ss_pred hccCcCceecccCCceEEEEEecCCceEEEEEeehhhH----HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECA----RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|+..+.||+|+||.||+|... ++.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57889999999999999999875 88999999875432 23467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC--------CCcEEEeeecCc
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE--------DMIAHLSDFGIA 622 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~--------~~~~kl~Dfgla 622 (763)
||+++++|.+++... .+++..+..++.|+++||+|||.....+|+||||||+||+++. ++.+||+|||.+
T Consensus 86 e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp ECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred EcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 999999999998643 5899999999999999999995322223999999999999986 678999999999
Q ss_pred eecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 623 KLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 623 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
+.+.... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||............
T Consensus 164 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~------------- 226 (271)
T 3dtc_A 164 REWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV------------- 226 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH-------------
T ss_pred ccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh-------------
Confidence 8764322 22456899999999998889999999999999999999999999764332211111
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhc
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQ 753 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~ 753 (763)
.......... ..+...+.+++..|++.+|++||++.|+++.|+++
T Consensus 227 ~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 227 AMNKLALPIP------STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HTSCCCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hcCCCCCCCC------cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 1111110000 12345689999999999999999999999999763
No 98
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.1e-39 Score=360.36 Aligned_cols=252 Identities=29% Similarity=0.410 Sum_probs=206.6
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCC-ceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD-FKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 552 (763)
.++|...+.||+|+||.||+|... |+.||||+++... ..+.+.+|+.++++++||||+++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 467889999999999999999886 7899999997553 4567899999999999999999999987665 78999999
Q ss_pred cCCCChhhhhccCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 553 MPNGSLDIFLYSSTC-MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
+++|+|.+++...+. .+++..+..++.|+++||+|| |+++|+||||||+|||++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999986543 468999999999999999999 7789999999999999999999999999999864321
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.....++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ....+.+.....
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--------------~~~~i~~~~~~~ 406 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------VVPRVEKGYKMD 406 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--------------HHHHHHTTCCCC
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcCCCCC
Confidence 122356889999999999999999999999999999999 999997632211 111111111100
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
.+..++..+.+++..||+.+|++|||+.++++.|+++...
T Consensus 407 ------~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 407 ------APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 0112456789999999999999999999999999887644
No 99
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=8.8e-39 Score=332.30 Aligned_cols=259 Identities=23% Similarity=0.261 Sum_probs=209.0
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
..++|.+.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 4578999999999999999999765 577899999987655556788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe---cCCCcEEEeeecCceecCCC
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL---DEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~ 628 (763)
|+++++|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||++ +.++.+||+|||++..+...
T Consensus 87 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 87 LCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYC---HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred ccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 999999999887643 588999999999999999999 77899999999999999 78899999999999876533
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. ......||+.|+|||++.+. ++.++||||||+++|||++|+.||........ ... + .....
T Consensus 163 ~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~------------~-~~~~~ 224 (277)
T 3f3z_A 163 K---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLK------------I-REGTF 224 (277)
T ss_dssp S---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH------------H-HHCCC
T ss_pred c---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHH------------H-HhCCC
Confidence 2 22345689999999987654 89999999999999999999999976432221 111 1 11111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH--HHhhcccc
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF--VLCEQFVS 756 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~--~L~~~~~~ 756 (763)
..+ ......+...+.+++..|++.||++||++.++++ .+++.+..
T Consensus 225 ~~~---~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 271 (277)
T 3f3z_A 225 TFP---EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 271 (277)
T ss_dssp CCC---HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHCC
T ss_pred CCC---chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccccc
Confidence 111 1111123556889999999999999999999985 45544444
No 100
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=8.2e-39 Score=336.29 Aligned_cols=266 Identities=25% Similarity=0.404 Sum_probs=208.9
Q ss_pred HhccCcCceecccCCceEEEEEecC----CceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeee-ecCCceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDD----GIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGC-SNDDFKA 547 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~ 547 (763)
..+|...+.||+|+||.||+|...+ +..||+|.+... .....+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3578889999999999999997542 236899988753 234567789999999999999999999986 4556889
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCC
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 627 (763)
+||||+++|+|.+++......+++..+..++.|+++||+|| |+++|+||||||+||+++.++.+||+|||+++.+..
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999987666789999999999999999999 778999999999999999999999999999987643
Q ss_pred CCC--ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHH
Q 046240 628 EDQ--SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVN 704 (763)
Q Consensus 628 ~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 704 (763)
... ........+|+.|+|||.+.+..++.++||||||+++|||++ |.+||........ . ..+..
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~-~------------~~~~~ 247 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-T------------VYLLQ 247 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH-H------------HHHHT
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH-H------------HHHhc
Confidence 321 112334567889999999988899999999999999999999 5556554322111 0 11111
Q ss_pred hhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCccccc
Q 046240 705 KTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSSELY 762 (763)
Q Consensus 705 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~~~~ 762 (763)
......+. .+...+.+++..|++.+|++||++.++++.|++++.....+.|
T Consensus 248 ~~~~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~~y 298 (298)
T 3f66_A 248 GRRLLQPE-------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 298 (298)
T ss_dssp TCCCCCCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCSCC
T ss_pred CCCCCCCc-------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccCCC
Confidence 11111111 1245688999999999999999999999999999887665544
No 101
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.2e-39 Score=358.50 Aligned_cols=259 Identities=19% Similarity=0.224 Sum_probs=206.8
Q ss_pred HHHHHHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHH---HHHHHHHHHHHHHhCCCCccceEEeeeecCC
Q 046240 469 DLSRATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECAR---AMKSFEVECEVMKNIRHRNLVKIISGCSNDD 544 (763)
Q Consensus 469 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 544 (763)
++....++|++.++||+|+||+||+|... +++.||+|++...... ....+.+|+.++..++||||++++++|.+.+
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 34445689999999999999999999775 5789999999864322 2334788999999999999999999999999
Q ss_pred ceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 545 FKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 545 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
..|+||||+++|+|.+++......+++..+..++.|++.||.|| |+.+|+||||||+|||++.++.+||+|||+++.
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILl~~~g~vkL~DFGla~~ 224 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence 99999999999999999987556799999999999999999999 778999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhH
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGI-----ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSL 699 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 699 (763)
...... .......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .
T Consensus 225 ~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-------------~ 290 (437)
T 4aw2_A 225 LMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-------------Y 290 (437)
T ss_dssp CCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------H
T ss_pred cccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-------------H
Confidence 643322 2234467999999999986 56789999999999999999999999976432211 1
Q ss_pred HHHHHhh-cCCCccccHHHHHHHHHHHHHHHHHccccCcCC--CCCHHHHHH
Q 046240 700 MEVVNKT-LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEK--RINAKCCNF 748 (763)
Q Consensus 700 ~~~i~~~-l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rps~~~v~~ 748 (763)
..++... -...|... ......+.+++.+|+..+|++ ||+++|+++
T Consensus 291 ~~i~~~~~~~~~p~~~----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 291 GKIMNHKERFQFPTQV----TDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHTHHHHCCCCSSC----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred HhhhhccccccCCccc----ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111111 01111110 012345788999999888888 999999875
No 102
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.7e-39 Score=336.47 Aligned_cols=267 Identities=21% Similarity=0.228 Sum_probs=199.6
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
++|++.+.||+|+||+||+|... +|+.||+|++.... ......+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47899999999999999999764 68999999997442 2334677899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++ ++.+.+......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC---HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--
Confidence 9986 55555555445789999999999999999999 77899999999999999999999999999998764322
Q ss_pred cccccccccccccCccccCCCC-CCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhc---ccCChhHHHHHHhhc
Q 046240 632 MTQTQTLATIGYMAPEYGIERK-VSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVN---GLLPVSLMEVVNKTL 707 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l 707 (763)
.......+|+.|+|||++.+.. ++.++|||||||++|||++|..|+............... .......... .+..
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~ 234 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM-TKLP 234 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTG-GGST
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhh-cccc
Confidence 2234457899999999987765 799999999999999999988886432222211111111 0000000000 0000
Q ss_pred CCC--cc-----ccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 708 LSP--PE-----KDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 708 ~~~--~~-----~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
... +. ............+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000 00 000000112456789999999999999999999986
No 103
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7.9e-39 Score=347.48 Aligned_cols=252 Identities=23% Similarity=0.285 Sum_probs=199.0
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 548 (763)
.++|++.+.||+|+||+||+|... +++.||+|++++.. ....+.+.+|..++.++ +||||+++++++...+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 368999999999999999999765 68899999998653 22345678899999887 89999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|..++...+ .+++..+..++.|++.||+|| |+.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999987643 589999999999999999999 7789999999999999999999999999999863222
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .........+.+...-.
T Consensus 207 ~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~-----~~~~~~~~~~~i~~~~~ 279 (396)
T 4dc2_A 207 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-----DQNTEDYLFQVILEKQI 279 (396)
T ss_dssp T--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-----------CCHHHHHHHHHHCCC
T ss_pred C--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc-----chhhHHHHHHHHhcccc
Confidence 2 2334567999999999999999999999999999999999999999643211100 00000111222221111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINA 743 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~ 743 (763)
..|. .+...+.+++..|++.||++||++
T Consensus 280 ~~p~-------~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 RIPR-------SLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred CCCC-------cCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1111 124567899999999999999996
No 104
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=346.28 Aligned_cols=269 Identities=19% Similarity=0.196 Sum_probs=203.7
Q ss_pred HhccCcCceecccCCceEEEEEec----CCceEEEEEeehhhHH-----------HHHHHHHHHHHHHhCCCCccceEEe
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD----DGIEVAIKVFHQECAR-----------AMKSFEVECEVMKNIRHRNLVKIIS 538 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~ 538 (763)
.++|.+.+.||+|+||.||+|... ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 368999999999999999999775 5788999998643211 1234667889999999999999999
Q ss_pred eeec----CCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC--
Q 046240 539 GCSN----DDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM-- 612 (763)
Q Consensus 539 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~-- 612 (763)
++.. ....++||||+ +++|.+++...+ .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYI---HENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCcCHHHEEEccCCCC
Confidence 9977 67899999999 999999998655 689999999999999999999 678999999999999999887
Q ss_pred cEEEeeecCceecCCCCCc-----cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhh
Q 046240 613 IAHLSDFGIAKLLSGEDQS-----MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSL 687 (763)
Q Consensus 613 ~~kl~Dfgla~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~ 687 (763)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999877432211 11244579999999999999999999999999999999999999996532221111
Q ss_pred hhh---hcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCccc
Q 046240 688 KHW---VNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSSE 760 (763)
Q Consensus 688 ~~~---~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~~ 760 (763)
... .....+.... ..... ..+...+.+++..||+.+|++||++.+|++.|++...+....
T Consensus 271 ~~~~~~~~~~~~~~~~----~~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 333 (345)
T 2v62_A 271 QTAKTNLLDELPQSVL----KWAPS---------GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPL 333 (345)
T ss_dssp HHHHHHHHHTTTHHHH----HHSCT---------TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCC
T ss_pred HHHHHhhcccccHHHH----hhccc---------cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCC
Confidence 111 1111111111 11100 023457899999999999999999999999999876654443
No 105
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.6e-40 Score=345.97 Aligned_cols=259 Identities=22% Similarity=0.342 Sum_probs=197.3
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCc----
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDF---- 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 545 (763)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999975 578999999997542 3345678899999999999999999999876553
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.++||||+++++|.+++...+ .+++.....++.|+++||+|| |+++|+||||||+||+++.++.+||+|||+++.+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 399999999999999997644 589999999999999999999 7789999999999999999999999999999876
Q ss_pred CCCCCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHH
Q 046240 626 SGEDQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVN 704 (763)
Q Consensus 626 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 704 (763)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..............
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~------------- 233 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------------- 233 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-------------
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc-------------
Confidence 533222 223345689999999999999999999999999999999999999976433221111111
Q ss_pred hhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHH-HHHhhc
Q 046240 705 KTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCN-FVLCEQ 753 (763)
Q Consensus 705 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~-~~L~~~ 753 (763)
..+.........+...+.+++.+||+.||++||++.+++ +.+.+.
T Consensus 234 ----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 234 ----EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ----CCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ----CCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 111111111112355688999999999999999766655 445443
No 106
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.2e-39 Score=362.55 Aligned_cols=258 Identities=28% Similarity=0.462 Sum_probs=205.9
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
.++|...+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 46788999999999999999999888889999997543 234678999999999999999999999876 6789999999
Q ss_pred CCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCcc
Q 046240 554 PNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSM 632 (763)
Q Consensus 554 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 632 (763)
++|+|.+++... ...+++..+..++.|+++||+|| |+++|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-ee
Confidence 999999999753 23588999999999999999999 77899999999999999999999999999998764322 11
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCc
Q 046240 633 TQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPP 711 (763)
Q Consensus 633 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 711 (763)
......++..|+|||.+.+..++.++|||||||++|||+| |+.||......+. .+.+.+.... +
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--------------~~~i~~~~~~-~ 401 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------------LDQVERGYRM-P 401 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------------HHHHHTTCCC-C
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH--------------HHHHHcCCCC-C
Confidence 2233456789999999988899999999999999999999 9999976432211 1111111110 0
Q ss_pred cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 712 EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 712 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
. ...++..+.+++..||+.+|++|||++++++.|++.+...
T Consensus 402 ~-----~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 402 C-----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp C-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred C-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 0 1124567899999999999999999999999999887654
No 107
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=343.71 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=201.9
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 67999999999999999999765 688999999976532 23467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++|+|..++.... .+++..+..++.|++.||.|| |+.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYL---QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET- 169 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence 9999999999997643 589999999999999999999 78899999999999999999999999999998765322
Q ss_pred ccccccccccccccCccccCC---CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 631 SMTQTQTLATIGYMAPEYGIE---RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......+....
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-----------~~~~~~~~~~~ 236 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-----------KEIVHTFETTV 236 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-----------HHHHHHHHHCC
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-----------HHHHHHHhhcc
Confidence 2345679999999999863 4589999999999999999999999974221110 01111111111
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCC-HHHHHH
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRIN-AKCCNF 748 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps-~~~v~~ 748 (763)
...+. .+...+.+++..|++.+|++||+ ++++.+
T Consensus 237 ~~~p~-------~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 VTYPS-------AWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCCT-------TSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred cCCCC-------cCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11111 12456889999999999999998 666653
No 108
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-39 Score=346.68 Aligned_cols=245 Identities=23% Similarity=0.348 Sum_probs=199.3
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHH---HHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECAR---AMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|.+.+.||+|+||.||+|.. .+++.||+|++...... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999976 57899999999765322 2457889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+ +|+|.+++.... .+++.....++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||++.......
T Consensus 89 E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYC---HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN- 162 (336)
T ss_dssp CCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-
T ss_pred ECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-
Confidence 999 678888776543 589999999999999999999 67899999999999999999999999999998764332
Q ss_pred ccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
......||+.|+|||++.+..+ ++++|||||||++|||++|+.||........ .... ......
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~~i---------~~~~~~ 226 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FKKV---------NSCVYV 226 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BCCC---------CSSCCC
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HHHH---------HcCCCC
Confidence 2234579999999999988776 7899999999999999999999976322110 0000 000000
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. .....+.+++.+|+..||++|||++|+++
T Consensus 227 ~p~-------~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 227 MPD-------FLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CCT-------TSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred Ccc-------cCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 111 12445789999999999999999999975
No 109
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.7e-38 Score=340.81 Aligned_cols=280 Identities=24% Similarity=0.345 Sum_probs=214.3
Q ss_pred CCChHHHHHHHhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHh--CCCCccceEEeeee
Q 046240 464 RLPYQDLSRATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKN--IRHRNLVKIISGCS 541 (763)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~ 541 (763)
..+..-.....++|.+.+.||+|+||.||+|... |+.||||++.... ...+.+|++++.. ++||||+++++++.
T Consensus 31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred CCceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 3444444556789999999999999999999874 8999999997543 3556778888887 68999999999998
Q ss_pred cCC----ceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEeCCCCCCCEEecCCC
Q 046240 542 NDD----FKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFR-----HTTPIIHCDLKSSNVLLDEDM 612 (763)
Q Consensus 542 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~-----h~~~ivH~dlk~~NIll~~~~ 612 (763)
... ..++||||+++|+|.+++... .+++..+..++.|+++||+|||.. |+.+|+||||||+||+++.++
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTS
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCC
Confidence 776 789999999999999999764 489999999999999999999521 178999999999999999999
Q ss_pred cEEEeeecCceecCCCCCcc--ccccccccccccCccccCCC------CCCcchhHHHHHHHHHHHHcC----------C
Q 046240 613 IAHLSDFGIAKLLSGEDQSM--TQTQTLATIGYMAPEYGIER------KVSTRSDIYSYGIMLIETFTR----------K 674 (763)
Q Consensus 613 ~~kl~Dfgla~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slGv~l~elltg----------~ 674 (763)
.+||+|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||+|| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 99999999998775433211 22445789999999998765 334789999999999999999 5
Q ss_pred CCCchhhhhhhhhhhhhcccCChhHHHHHH-hhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhc
Q 046240 675 KPADKMFAAELSLKHWVNGLLPVSLMEVVN-KTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQ 753 (763)
Q Consensus 675 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~ 753 (763)
.||.......... ....+.+. .........+. ....+...+.+++..||+.+|++||++.+|++.|+++
T Consensus 265 ~p~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 265 LPYYDLVPSDPSV---------EEMRKVVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp CTTTTTSCSSCCH---------HHHHHHHTTSCCCCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCccccCcCcccH---------HHHHHHHHHHHhCCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 6665422111000 01111111 11111111111 1224567899999999999999999999999999998
Q ss_pred cccCcc
Q 046240 754 FVSNSS 759 (763)
Q Consensus 754 ~~~~~~ 759 (763)
.++...
T Consensus 335 ~~~~~~ 340 (342)
T 1b6c_B 335 SQQEGI 340 (342)
T ss_dssp HHTTC-
T ss_pred HHHhcC
Confidence 877543
No 110
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-39 Score=333.91 Aligned_cols=259 Identities=26% Similarity=0.406 Sum_probs=210.2
Q ss_pred hccCcCc-eecccCCceEEEEEec---CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 475 NRFGRDN-LIGIGSFGYVYKAELD---DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 475 ~~~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
++|.+.+ .||+|+||.||+|... +++.||+|+++.. .....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4566666 8999999999999753 5788999999764 234567789999999999999999999999 45678999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||+++++|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 999999999999987666799999999999999999999 77899999999999999999999999999998875333
Q ss_pred Cc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 630 QS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 630 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
.. .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ..+.+....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------------~~~~i~~~~ 230 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------------VMAFIEQGK 230 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--------------HHHHHHTTC
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--------------HHHHHhcCC
Confidence 21 12233456889999999988889999999999999999999 999997643221 111111111
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
. +.. ...+...+.+++..||+.+|++||++.++++.|++++...
T Consensus 231 ~--~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 231 R--MEC----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp C--CCC----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred c--CCC----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 000 0123557899999999999999999999999999887664
No 111
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4e-39 Score=344.44 Aligned_cols=248 Identities=25% Similarity=0.339 Sum_probs=201.6
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKA 547 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 547 (763)
..++|.+.+.||+|+||.||+|... +|+.||+|+++.... ...+.+..|..+++.+ +||||+++++++...+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999775 689999999986532 2345677899999887 8999999999999999999
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCC
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 627 (763)
+||||+++|+|.+++.... .+++..+..++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFL---HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999987643 588999999999999999999 778999999999999999999999999999986432
Q ss_pred CCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 628 EDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 628 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ . ..+.....
T Consensus 171 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~------------~~i~~~~~ 235 (345)
T 1xjd_A 171 GD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-F------------HSIRMDNP 235 (345)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H------------HHHHHCCC
T ss_pred CC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH-H------------HHHHhCCC
Confidence 22 123456799999999999999999999999999999999999999976432211 0 11111111
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHH-HHH
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAK-CCN 747 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~-~v~ 747 (763)
..+. .....+.+++.+|+..+|++||++. ++.
T Consensus 236 -~~p~-------~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 -FYPR-------WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -CCCT-------TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -CCCc-------ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0111 1245678999999999999999987 554
No 112
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=338.01 Aligned_cols=246 Identities=22% Similarity=0.222 Sum_probs=194.6
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 548 (763)
..++|+..+.||+|+||+||+|... +|+.||||++.... .........|+..+.++ +||||+++++++.+++..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3468999999999999999999775 79999999986432 22334445566666555 89999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+ +++|.+++......+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL---HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 99999 6688888877666799999999999999999999 6789999999999999999999999999999876432
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... .........+.
T Consensus 211 ~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~~~~~~~~----------- 271 (311)
T 3p1a_A 211 G---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQGYLPP----------- 271 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHHTTTCCCH-----------
T ss_pred C---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHhccCCCc-----------
Confidence 2 2334568999999998875 789999999999999999999766544211 11111111111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.....+...+.+++..|++.||++|||++|+++
T Consensus 272 -------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 -------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 111223567899999999999999999999986
No 113
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-39 Score=355.94 Aligned_cols=255 Identities=21% Similarity=0.252 Sum_probs=204.5
Q ss_pred HHHHHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCc
Q 046240 470 LSRATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDF 545 (763)
Q Consensus 470 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 545 (763)
+....++|.+.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3344678999999999999999999765 688999999976432 123457889999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.|+||||+++|+|.+++... .++......++.|++.||+|| |+.+|+||||||+|||++.++.+||+|||+++.+
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~L---H~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 99999999999999998764 488899999999999999999 7789999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCccccCCCC----CCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHH
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYGIERK----VSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLME 701 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (763)
..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ ...
T Consensus 219 ~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-------------~~~ 284 (410)
T 3v8s_A 219 NKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-------------YSK 284 (410)
T ss_dssp CTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHH
T ss_pred ccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-------------HHH
Confidence 53322 1233567999999999987654 78999999999999999999999976332211 111
Q ss_pred HHHhh-cCCCccccHHHHHHHHHHHHHHHHHccccCcCC--CCCHHHHHH
Q 046240 702 VVNKT-LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEK--RINAKCCNF 748 (763)
Q Consensus 702 ~i~~~-l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rps~~~v~~ 748 (763)
++... -...+.. ......+.+++..|+..+|++ ||+++||++
T Consensus 285 i~~~~~~~~~p~~-----~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 285 IMNHKNSLTFPDD-----NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHTHHHHCCCCTT-----CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred HHhccccccCCCc-----ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 21111 0111110 012445789999999988988 999999985
No 114
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=340.07 Aligned_cols=260 Identities=27% Similarity=0.461 Sum_probs=204.1
Q ss_pred hccCcCceecccCCceEEEEEecC-----CceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELDD-----GIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
++|...+.||+|+||.||+|.... +..||+|++.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 567778999999999999997642 2459999997542 3445678899999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 9999999999999987666799999999999999999999 7789999999999999999999999999999876433
Q ss_pred CC-ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 629 DQ-SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 629 ~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
.. ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ..+.+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--------------~~~~~~~~ 266 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--------------VMKAINDG 266 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------------HHHHHHTT
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--------------HHHHHHCC
Confidence 22 112233446788999999998999999999999999999999 999996533221 11111111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
... +. ...+...+.+++..||+.+|++||++.++++.|++++...
T Consensus 267 ~~~-~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 267 FRL-PT-----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp CCC-CC-----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred CcC-CC-----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 110 10 0123456899999999999999999999999998877653
No 115
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9.7e-39 Score=348.98 Aligned_cols=271 Identities=21% Similarity=0.261 Sum_probs=204.3
Q ss_pred HhccCcCceeccc--CCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIG--SFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G--~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
.++|++.+.||+| +||+||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4689999999999 99999999765 78999999997553 3445778899999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCC
Q 046240 549 VLEYMPNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 627 (763)
||||+++|+|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999998764 23689999999999999999999 778999999999999999999999999999876532
Q ss_pred CCC-----ccccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCCh---
Q 046240 628 EDQ-----SMTQTQTLATIGYMAPEYGIE--RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPV--- 697 (763)
Q Consensus 628 ~~~-----~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 697 (763)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ .....+.
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~ 259 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCLLD 259 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-hcCCCCcccc
Confidence 211 111233478999999999887 67999999999999999999999999764322211111 1111000
Q ss_pred -------hH-------------HHHHHhhcCCCc---cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 698 -------SL-------------MEVVNKTLLSPP---EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 698 -------~~-------------~~~i~~~l~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.. .+.+........ .............+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00 000000000000 0000112234567899999999999999999999985
No 116
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.1e-38 Score=339.58 Aligned_cols=248 Identities=22% Similarity=0.297 Sum_probs=193.0
Q ss_pred HhccCcCceecccCCceEEEEEe----cCCceEEEEEeehhh----HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL----DDGIEVAIKVFHQEC----ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 545 (763)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++... ......+.+|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999999976 478999999997542 2234567889999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.++||||+++++|.+++.... .++......++.|++.||.|| |+++|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHL---HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHH---HhCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999987643 578889999999999999999 7789999999999999999999999999999764
Q ss_pred CCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...
T Consensus 172 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------------~~~i~~~ 236 (327)
T 3a62_A 172 IHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-------------IDKILKC 236 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-------------HHHHHHT
T ss_pred ccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-------------HHHHHhC
Confidence 32221 22345789999999999999999999999999999999999999976432211 1112211
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRI-----NAKCCNF 748 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~v~~ 748 (763)
.... +. .....+.+++.+|++.+|++|| ++.++++
T Consensus 237 ~~~~-p~-------~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 KLNL-PP-------YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CCCC-CT-------TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCC-CC-------CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1111 11 1245678999999999999999 5666654
No 117
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.3e-38 Score=338.42 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=206.0
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHH------HHHHHHHHHHHHHhCCCCccceEEeeeecCCc
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECAR------AMKSFEVECEVMKNIRHRNLVKIISGCSNDDF 545 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 545 (763)
..++|.+.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3578999999999999999999765 6899999998754211 25678899999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC----cEEEeeecC
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM----IAHLSDFGI 621 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~----~~kl~Dfgl 621 (763)
.++||||+++++|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l---H~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 999999999999999997643 588999999999999999999 778999999999999999887 799999999
Q ss_pred ceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHH
Q 046240 622 AKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLME 701 (763)
Q Consensus 622 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (763)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|..||........ ...
T Consensus 166 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~------------ 229 (321)
T 2a2a_A 166 AHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN------------ 229 (321)
T ss_dssp CEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH------------
T ss_pred ceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH-HHH------------
Confidence 98765322 22345689999999999999999999999999999999999999976332211 111
Q ss_pred HHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 702 VVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 702 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...................+.+++..|++.||++|||+.|+++
T Consensus 230 ----i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 230 ----ITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp ----HHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ----HHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111111111111223456889999999999999999999986
No 118
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=344.07 Aligned_cols=259 Identities=25% Similarity=0.410 Sum_probs=201.8
Q ss_pred HhccCcCceecccCCceEEEEEec-CCce----EEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIE----VAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKA 547 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 547 (763)
.++|++.+.||+|+||.||+|... +++. ||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367999999999999999999754 4554 577776533 2234567889999999999999999999998765 78
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCC
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 627 (763)
+|+||+++|+|.+++......+++..+..++.|+++||.|| |+++|+||||||+||+++.++.+||+|||+++.+..
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 99999999999999987766799999999999999999999 778999999999999999999999999999988754
Q ss_pred CCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 628 EDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 628 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
...........+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ..+.+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------------~~~~~~~~ 235 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--------------ISSILEKG 235 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------------HHHHHHTT
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------------HHHHHHcC
Confidence 443333444567889999999999999999999999999999999 999997643221 22222222
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
...... ..+...+.+++..||+.+|++||++.|+++.|+++...
T Consensus 236 ~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 236 ERLPQP------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCCCC------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCCCC------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111111 11245688999999999999999999999999987754
No 119
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.2e-38 Score=337.51 Aligned_cols=267 Identities=22% Similarity=0.392 Sum_probs=201.1
Q ss_pred HHHHHHhccCcCceecccCCceEEEEEec----CCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeec
Q 046240 469 DLSRATNRFGRDNLIGIGSFGYVYKAELD----DGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSN 542 (763)
Q Consensus 469 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 542 (763)
++....++|.+.+.||+|+||.||+|... +++.||+|+++.. .....+.+.+|+.++++++||||+++++++..
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 33345678999999999999999999654 3458999998754 23445778999999999999999999999977
Q ss_pred CC-----ceEEEEEccCCCChhhhhcc-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC
Q 046240 543 DD-----FKALVLEYMPNGSLDIFLYS-----STCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM 612 (763)
Q Consensus 543 ~~-----~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~ 612 (763)
.+ ..++||||+++++|.+++.. ....+++..+..++.|+++||.|| |+.+|+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCC
Confidence 65 35999999999999999843 234689999999999999999999 788999999999999999999
Q ss_pred cEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhh
Q 046240 613 IAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWV 691 (763)
Q Consensus 613 ~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~ 691 (763)
.+||+|||+++.+.............+++.|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------- 257 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------- 257 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-------
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH-------
Confidence 999999999987654333333344567889999999999999999999999999999999 889987633221
Q ss_pred cccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 692 NGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 692 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
..+.+......... ..+...+.+++..||+.+|++||++.++++.|++++.+-+
T Consensus 258 -------~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 258 -------MYDYLLHGHRLKQP------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp -------HHHHHHTTCCCCCB------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred -------HHHHHHcCCCCCCC------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 11111111110000 1234568999999999999999999999999998876543
No 120
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=334.48 Aligned_cols=264 Identities=23% Similarity=0.345 Sum_probs=208.0
Q ss_pred hccCcCceecccCCceEEEEEec-C---CceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCce-EE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-D---GIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK-AL 548 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~l 548 (763)
..|...+.||+|+||+||+|... + +..||+|++.... ....+.+.+|+.++++++||||+++++++...+.. ++
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 35667789999999999999753 2 2379999987543 34567788999999999999999999999876654 99
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+.+|+|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999988666789999999999999999999 7789999999999999999999999999999866432
Q ss_pred CC--ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 629 DQ--SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 629 ~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
.. ........++..|+|||.+.+..++.++|||||||++|||++|..|+....... .....+...
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-------------~~~~~~~~~ 244 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-------------DLTHFLAQG 244 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-------------GHHHHHHTT
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-------------HHHHHhhcC
Confidence 21 122234567889999999999999999999999999999999655543311111 112222211
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCccc
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSSE 760 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~~ 760 (763)
...... ..+...+.+++..|++.+|++|||+.+++++|++++..-...
T Consensus 245 ~~~~~~------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 245 RRLPQP------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp CCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred CCCCCC------ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 111111 112456889999999999999999999999999887765443
No 121
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=345.54 Aligned_cols=251 Identities=21% Similarity=0.259 Sum_probs=189.6
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
..++|.+.+.||+|+||.||+|... +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3578999999999999999999775 57899999997543 34567889999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC---CCcEEEeeecCceecCCC
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE---DMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~~~~~~ 628 (763)
|+++|+|.+++...+ .+++..+..++.|+++||.|| |+.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYL---HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999987654 589999999999999999999 6789999999999999975 889999999999876432
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||............... ....
T Consensus 205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~------------~~~~ 269 (349)
T 2w4o_A 205 V---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN------------CEYY 269 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT------------TCCC
T ss_pred c---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh------------CCCc
Confidence 1 223456899999999999999999999999999999999999999764332211111111 1110
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. +.. ........+.+++.+|++.||++||++.++++
T Consensus 270 ~-~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 270 F-ISP---WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp C-CTT---TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c-CCc---hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000 00112456889999999999999999999986
No 122
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=347.32 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=195.8
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCC--CccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRH--RNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 549 (763)
.++|.+.+.||+|+||.||++...+++.||||++... .....+.+.+|+.++++++| |||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4679999999999999999998888999999998744 23445778999999999976 9999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|| +.+++|.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++ ++.+||+|||+++.+....
T Consensus 88 ~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 56789999997654 688999999999999999999 678999999999999997 5789999999998775443
Q ss_pred CccccccccccccccCccccCC-----------CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChh
Q 046240 630 QSMTQTQTLATIGYMAPEYGIE-----------RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVS 698 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 698 (763)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----------- 230 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL----------- 230 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH-----------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHH-----------
Confidence 3333445679999999998754 678999999999999999999999997532221111
Q ss_pred HHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 699 LMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 699 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+++......... .....+.+++..||+.||++|||+.++++
T Consensus 231 -~~~~~~~~~~~~~~------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 231 -HAIIDPNHEIEFPD------IPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp -HHHHCTTSCCCCCC------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHHhcCCcccCCcc------cCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 11121111111111 11345789999999999999999999985
No 123
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-38 Score=342.54 Aligned_cols=246 Identities=26% Similarity=0.335 Sum_probs=199.9
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh---hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE---CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|...+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 46689999999999999999975 57899999998643 233456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||++ |++.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 99997 577777765555789999999999999999999 778999999999999999999999999999987542
Q ss_pred CccccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 630 QSMTQTQTLATIGYMAPEYGI---ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
.....||+.|+|||++. +..++.++|||||||++|||++|+.||......... ..+....
T Consensus 207 ----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~-------------~~~~~~~ 269 (348)
T 1u5q_A 207 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-------------YHIAQNE 269 (348)
T ss_dssp ----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-------------HHHHHSC
T ss_pred ----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-------------HHHHhcC
Confidence 23356899999999874 577899999999999999999999998764322110 1111110
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+.... ..+...+.+++..||+.+|++|||++++++
T Consensus 270 ---~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 270 ---SPALQS---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ---CCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCCCCC---CCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 111000 112456789999999999999999999975
No 124
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.1e-39 Score=338.55 Aligned_cols=261 Identities=22% Similarity=0.258 Sum_probs=201.2
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
-++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999765 78899999997543 23357788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||+++++|.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAA---HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999997643 589999999999999999999 77899999999999999999999999999998764322
Q ss_pred CccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 630 QSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
. .......+++.|+|||++.+..++.++||||||+++|||++|+.||....... ... .+......
T Consensus 189 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~------------~~~~~~~~ 253 (309)
T 2h34_A 189 L-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV--MGA------------HINQAIPR 253 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH--HHH------------HHHSCCCC
T ss_pred c-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH--HHH------------HhccCCCC
Confidence 1 12234568999999999999999999999999999999999999997643221 111 11111100
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCC-CHHHHHHHHhhccccC
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRI-NAKCCNFVLCEQFVSN 757 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-s~~~v~~~L~~~~~~~ 757 (763)
+ ......+...+.+++.+||+.+|++|| +++++++.|++.+...
T Consensus 254 -~---~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 254 -P---STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp -G---GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred -c---cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0 000112345688999999999999999 9999999999888775
No 125
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.9e-39 Score=333.87 Aligned_cols=259 Identities=23% Similarity=0.382 Sum_probs=206.5
Q ss_pred HhccCcCceecccCCceEEEEEecC----CceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDD----GIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
.++|...+.||+|+||.||+|...+ +..||+|++... .....+.+.+|+.++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4689999999999999999997542 346999998765 234567789999999999999999999998754 5689
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++++|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999987666789999999999999999999 7789999999999999999999999999999876432
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
.. .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ..+.+....
T Consensus 167 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--------------~~~~~~~~~ 231 (281)
T 3cc6_A 167 DY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--------------VIGVLEKGD 231 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--------------HHHHHHHTC
T ss_pred cc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--------------HHHHHhcCC
Confidence 21 12234457889999999988899999999999999999998 999986532221 111111111
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
..... ..+...+.+++..|++.+|++||++.++++.|+++.+.+
T Consensus 232 ~~~~~------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 232 RLPKP------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp CCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCC------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 11100 112456889999999999999999999999999876643
No 126
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.1e-38 Score=339.46 Aligned_cols=251 Identities=24% Similarity=0.280 Sum_probs=199.6
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 549 (763)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57999999999999999999765 68999999997652 33456678899999988 899999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||+++|+|..++...+ .+++..+..++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999999987643 588999999999999999999 77899999999999999999999999999998643222
Q ss_pred CccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 630 QSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ........+.+...-..
T Consensus 165 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 237 (345)
T 3a8x_A 165 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD-----QNTEDYLFQVILEKQIR 237 (345)
T ss_dssp --CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------------CHHHHHHHHHHCCCC
T ss_pred --CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc-----cccHHHHHHHHHcCCCC
Confidence 12345679999999999999999999999999999999999999996532111000 00001111112111111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINA 743 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~ 743 (763)
.|. .....+.+++.+|++.||++||++
T Consensus 238 ~p~-------~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 IPR-------SLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CCT-------TSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCC-------CCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111 124567899999999999999996
No 127
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-38 Score=331.24 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=206.7
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3478999999999999999999765 78999999997543 234577889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++++|.+++.... .++...+..++.|+++||.|| |+.+++||||||+||+++.++.+||+|||.+..+.....
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 85 EYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYL---HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp ECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 9999999999987543 588999999999999999999 778999999999999999999999999999987643332
Q ss_pred ccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
........|++.|+|||.+.+..+ +.++||||||+++|||++|+.||............+... ....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------~~~~ 228 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK------------KTYL 228 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT------------CTTS
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc------------cccc
Confidence 223345678999999999887665 779999999999999999999997643322222222111 1000
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. ......+.+++..|++.+|++|||++++++
T Consensus 229 ~~~------~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 NPW------KKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTG------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred Cch------hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 110 112456789999999999999999999986
No 128
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=341.45 Aligned_cols=270 Identities=25% Similarity=0.388 Sum_probs=213.5
Q ss_pred HhccCcCceecccCCceEEEEEe-----cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCC--ce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-----DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD--FK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~ 546 (763)
.++|.+.+.||+|+||.||+|.. .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 46789999999999999999974 368899999997665556678899999999999999999999987654 78
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
++||||+++++|.+++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 999999999999999987766789999999999999999999 67899999999999999999999999999998875
Q ss_pred CCCCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCC-h----hHH
Q 046240 627 GEDQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLP-V----SLM 700 (763)
Q Consensus 627 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-~----~~~ 700 (763)
..... .......++..|+|||.+.+..++.++|||||||++|||+||..|+........ ........ . ...
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM---RMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH---HHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH---HhhccccchhhhHHHHH
Confidence 43321 112334577889999999888899999999999999999999999875432211 11111111 1 111
Q ss_pred HHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccc
Q 046240 701 EVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFV 755 (763)
Q Consensus 701 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~ 755 (763)
+.+....... . ...+...+.+++..||+.+|++||++.++++.|+++..
T Consensus 274 ~~~~~~~~~~-~-----~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 274 ELLKNNGRLP-R-----PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHTTCCCC-C-----CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhcCCCCC-C-----CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2222111110 0 11235678999999999999999999999999987654
No 129
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-39 Score=348.21 Aligned_cols=264 Identities=25% Similarity=0.406 Sum_probs=199.8
Q ss_pred hccCcCceecccCCceEEEEEec--CC--ceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeec-CCceEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD--DG--IEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSN-DDFKAL 548 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~l 548 (763)
.+|...+.||+|+||+||+|... ++ ..||+|.+.... ....+.+.+|+.++++++||||+++++++.+ ++..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 35677889999999999999753 22 468999886432 3456788999999999999999999998754 457899
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|.+++......+++..+..++.|+++||+|| |+++|+||||||+||+++.++.+||+|||+++.+...
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999987766789999999999999999999 7789999999999999999999999999999876432
Q ss_pred CCc--cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 629 DQS--MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 629 ~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
... .......+++.|+|||++.+..++.++|||||||++|||+| |.+||....... ....+..
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--------------~~~~~~~ 311 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------------ITVYLLQ 311 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--------------HHHHHHT
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--------------HHHHHHc
Confidence 211 12234557889999999999999999999999999999999 677776532211 1111111
Q ss_pred hc-CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCccccc
Q 046240 706 TL-LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSSELY 762 (763)
Q Consensus 706 ~l-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~~~~ 762 (763)
.. ...+ ..+...+.+++..||+.+|++||++.++++.|++++.....+.|
T Consensus 312 ~~~~~~p-------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~ 362 (373)
T 3c1x_A 312 GRRLLQP-------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHY 362 (373)
T ss_dssp TCCCCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCB
T ss_pred CCCCCCC-------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccce
Confidence 10 0111 12355689999999999999999999999999988876544433
No 130
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.1e-38 Score=338.28 Aligned_cols=259 Identities=24% Similarity=0.313 Sum_probs=188.2
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999764 68999999987543 2234677899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 552 YMPNGSLDIFLYSST-----CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
|++ |+|.+++.... ..+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC---HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 58888875421 3588999999999999999999 77899999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhhhhcccC--------
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKHWVNGLL-------- 695 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~~~~~~-------- 695 (763)
.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .........
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 3221 2234578999999999876 46899999999999999999999999764332211 001000000
Q ss_pred -------------ChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 696 -------------PVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 696 -------------~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+....+.+..... +.....+.+++..|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTK----------EPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCS----------SCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhccccc----------ccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0011111111000 112456899999999999999999999985
No 131
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.1e-38 Score=340.03 Aligned_cols=244 Identities=20% Similarity=0.274 Sum_probs=203.3
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 68999999999999999999765 789999999976532 23467788999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++|+|.+++...+ .++...+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 9999999999997643 588999999999999999999 7889999999999999999999999999999876432
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+...... .
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-------------~~~i~~~~~~-~ 257 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI-------------YEKIVSGKVR-F 257 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHCCCC-C
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH-------------HHHHHcCCCC-C
Confidence 2345799999999999999999999999999999999999999976322111 1111111111 1
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCC-----HHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRIN-----AKCCNF 748 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps-----~~~v~~ 748 (763)
+. .+...+.+++.+|++.||++||+ ++++++
T Consensus 258 p~-------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 258 PS-------HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CT-------TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CC-------CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11 12456889999999999999998 777764
No 132
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.7e-38 Score=331.33 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=204.2
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 478999999999999999999764 68999999997543 344577889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc---EEEeeecCceecCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI---AHLSDFGIAKLLSG 627 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~---~kl~Dfgla~~~~~ 627 (763)
||+++++|.+.+.... .+++..+..++.|++.||.|| |+.+|+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999988886643 588999999999999999999 7789999999999999986655 99999999987643
Q ss_pred CCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 628 EDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 628 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
.. ......|++.|+|||++.+..++.++||||||+++|||++|+.||........ ...+....
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--------------~~~~~~~~ 223 (284)
T 3kk8_A 161 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--------------YAQIKAGA 223 (284)
T ss_dssp SC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------------HHHHHHTC
T ss_pred Cc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH--------------HHHHHhcc
Confidence 22 22345789999999999999999999999999999999999999976332211 11111111
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...+... ...+...+.+++..|++.+|++|||+.|+++
T Consensus 224 ~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 224 YDYPSPE---WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CCCCTTT---TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCchh---hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1111110 0112456889999999999999999999986
No 133
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=346.60 Aligned_cols=254 Identities=16% Similarity=0.104 Sum_probs=204.1
Q ss_pred HHhccCcCceecccCCceEEEEE------ecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC---CCccceEEeeeecC
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAE------LDDGIEVAIKVFHQECARAMKSFEVECEVMKNIR---HRNLVKIISGCSND 543 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 543 (763)
..++|.+.+.||+|+||+||+|. ..+++.||||++.... ...+.+|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45789999999999999999993 4568899999997553 345677888888886 99999999999999
Q ss_pred CceEEEEEccCCCChhhhhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC---------
Q 046240 544 DFKALVLEYMPNGSLDIFLYS----STCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE--------- 610 (763)
Q Consensus 544 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~--------- 610 (763)
+..++||||+++|+|.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l---H~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV---HDCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999974 344699999999999999999999 7889999999999999998
Q ss_pred --CCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhh
Q 046240 611 --DMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLK 688 (763)
Q Consensus 611 --~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~ 688 (763)
++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 296 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE 296 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec
Confidence 899999999999876433333344566799999999999999999999999999999999999999865332211000
Q ss_pred hhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCC-CCHHHHHHHHhhccccC
Q 046240 689 HWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKR-INAKCCNFVLCEQFVSN 757 (763)
Q Consensus 689 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R-ps~~~v~~~L~~~~~~~ 757 (763)
. .....+ ..+.+.+++..|++.+|.+| |+++++.+.|++.+.+.
T Consensus 297 ~----------------~~~~~~---------~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 297 G----------------LFRRLP---------HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp S----------------CCTTCS---------SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred h----------------hccccC---------cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0 000001 13456788888888898888 46777777777766653
No 134
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4e-39 Score=336.89 Aligned_cols=260 Identities=25% Similarity=0.411 Sum_probs=214.3
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
..++|.+.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4678999999999999999999775 58899999997543 345678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 552 YMPNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 552 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
|+++++|.+++... ...+++..+..++.+++.||.|| |+.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT- 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHH---HHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHH---HHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-
Confidence 99999999999763 34689999999999999999999 67899999999999999999999999999998765332
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
........+++.|+|||++.+..++.++||||||+++|||++ |..||...... ...+.+......
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--------------~~~~~~~~~~~~ 231 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------------QVYELLEKDYRM 231 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------------GHHHHHHTTCCC
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------------HHHHHHhccCCC
Confidence 223344557889999999988899999999999999999999 99998763221 112222222111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
... ..+...+.+++..|++.+|++||++.++++.|++.+.+.
T Consensus 232 ~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 232 ERP------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCC------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 123456899999999999999999999999998877653
No 135
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=352.49 Aligned_cols=258 Identities=21% Similarity=0.260 Sum_probs=204.4
Q ss_pred HHHHHHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCC
Q 046240 469 DLSRATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD 544 (763)
Q Consensus 469 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 544 (763)
+.....++|++.+.||+|+||+||+|... +|+.||+|++++.. ....+.+.+|..++..++||||+++++++.+.+
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 33344688999999999999999999774 78999999997642 223445788999999999999999999999999
Q ss_pred ceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 545 FKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 545 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
..|+||||+++|+|.+++...+..+++..+..++.|++.||+|| |+.+|+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV---HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 99999999999999999987555689999999999999999999 778999999999999999999999999999988
Q ss_pred cCCCCCccccccccccccccCccccC-------CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCCh
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGI-------ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPV 697 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 697 (763)
+..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||........
T Consensus 212 ~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------------ 278 (412)
T 2vd5_A 212 LRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET------------ 278 (412)
T ss_dssp CCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------------
T ss_pred ccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH------------
Confidence 653322 1223467999999999886 46789999999999999999999999976432211
Q ss_pred hHHHHHHhh-cCCCccccHHHHHHHHHHHHHHHHHccccCcCCC---CCHHHHHH
Q 046240 698 SLMEVVNKT-LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKR---INAKCCNF 748 (763)
Q Consensus 698 ~~~~~i~~~-l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R---ps~~~v~~ 748 (763)
...++... ....+. ....+..++.+++.+|+. +|++| |+++|+++
T Consensus 279 -~~~i~~~~~~~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 279 -YGKIVHYKEHLSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -HHHHHTHHHHCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -HHHHHhcccCcCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 11111100 001111 011234567899999998 89988 57887764
No 136
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=331.23 Aligned_cols=248 Identities=25% Similarity=0.385 Sum_probs=184.4
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHH---HHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECAR---AMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|.+.+.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 6799999999999999999976 57899999999765322 2467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++++|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||.+........
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL---HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 99999999999987666789999999999999999999 778999999999999999999999999999987642221
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||........ +.+.....
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----------------~~~~~~~~ 228 (278)
T 3cok_A 168 --KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----------------LNKVVLAD 228 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCSSC
T ss_pred --cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----------------HHHHhhcc
Confidence 22335689999999999988999999999999999999999999975321110 00000011
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.... ......+.+++.+|++.||++||+++++++
T Consensus 229 ~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 229 YEMP----SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cCCc----cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1000 112446789999999999999999999986
No 137
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=344.97 Aligned_cols=276 Identities=28% Similarity=0.351 Sum_probs=198.2
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeee-----cCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCS-----NDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-----~~~~~~l 548 (763)
.++|.+.+.||+|+||.||+|.. +++.||||++....... ...+.|+..+..++||||+++++++. .....++
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 36899999999999999999976 58999999997553221 12233444455689999999997543 2336789
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CeEeCCCCCCCEEecCCCcEEEeee
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTT---------PIIHCDLKSSNVLLDEDMIAHLSDF 619 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~---------~ivH~dlk~~NIll~~~~~~kl~Df 619 (763)
||||+++|+|.+++.... .++..+..++.|+++||+|| |+. +|+||||||+||+++.++.+||+||
T Consensus 90 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~L---H~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYL---HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHH---HCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHH---HhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 999999999999997654 58889999999999999999 555 9999999999999999999999999
Q ss_pred cCceecCCCCC------ccccccccccccccCccccCC-------CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh
Q 046240 620 GIAKLLSGEDQ------SMTQTQTLATIGYMAPEYGIE-------RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS 686 (763)
Q Consensus 620 gla~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 686 (763)
|+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..|+.........
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 99987753221 112234569999999999876 45677999999999999999998776432211100
Q ss_pred ---hhhhhcccCCh-hHHHHHHhhcCCCc-cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 687 ---LKHWVNGLLPV-SLMEVVNKTLLSPP-EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 687 ---~~~~~~~~~~~-~~~~~i~~~l~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
........... .....+.....+.. .........+...+.+++..||+.||++|||+.|+++.|++++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 00001111111 12222221111111 000111122456799999999999999999999999999887654
No 138
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.7e-39 Score=349.52 Aligned_cols=250 Identities=21% Similarity=0.302 Sum_probs=196.6
Q ss_pred hccCcCceecccCCceEEEEEecCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCC--CCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIR--HRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|.+.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 569999999999999999998888999999998644 2345677899999999996 599999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
| +.+++|.+++.... .+++..+..++.||++||.|| |+.+|+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHH---HTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56889999997654 688889999999999999999 788999999999999996 57999999999987754333
Q ss_pred ccccccccccccccCccccCC-----------CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhH
Q 046240 631 SMTQTQTLATIGYMAPEYGIE-----------RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSL 699 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 699 (763)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~------------ 277 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL------------ 277 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH------------
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHH------------
Confidence 323345679999999998764 468899999999999999999999997532211111
Q ss_pred HHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 700 MEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 700 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+++.......... ....+.+++..||+.||++||++.|+++
T Consensus 278 ~~~~~~~~~~~~~~~------~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 278 HAIIDPNHEIEFPDI------PEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHHHCTTSCCCCCCC------SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhCccccCCCCcc------chHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 112221111110110 1345789999999999999999999985
No 139
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=339.42 Aligned_cols=265 Identities=21% Similarity=0.246 Sum_probs=208.3
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeee----cCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCS----NDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~l 548 (763)
.++|.+.+.||+|+||.||++.. .+|+.||||++........+.+.+|+++++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46899999999999999999976 578999999987665566778899999999999999999999986 3447889
Q ss_pred EEEccCCCChhhhhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 549 VLEYMPNGSLDIFLYS---STCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
||||+++|+|.+++.. ....+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||.++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI---HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999875 345689999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCCcc-------ccccccccccccCccccCCCC---CCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccC
Q 046240 626 SGEDQSM-------TQTQTLATIGYMAPEYGIERK---VSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLL 695 (763)
Q Consensus 626 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 695 (763)
....... ......|++.|+|||++.+.. ++.++|||||||++|||++|+.||...........
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~------- 257 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA------- 257 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH-------
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh-------
Confidence 3111100 012345799999999987544 68999999999999999999999976432221111
Q ss_pred ChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCcc
Q 046240 696 PVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNSS 759 (763)
Q Consensus 696 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~~ 759 (763)
..+...... +.. ..+...+.+++..||+.||++||++.++++.|+.+....+.
T Consensus 258 -----~~~~~~~~~-~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 258 -----LAVQNQLSI-PQS-----PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp -----HHHHCC--C-CCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred -----HHhhccCCC-Ccc-----ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 111111111 110 11245689999999999999999999999999987666443
No 140
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.7e-38 Score=349.47 Aligned_cols=246 Identities=25% Similarity=0.389 Sum_probs=204.1
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHH---HHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECAR---AMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|.+.+.||+|+||.||+|... +|+.||||++...... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57899999999999999999765 7999999999765322 3467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++|+|.+++...+ .+++.....++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 170 (476)
T ss_dssp ECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence 9999999999997643 589999999999999999999 78899999999999999999999999999998865322
Q ss_pred ccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||........ ...+.+. ...
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-------------~~~i~~~-~~~ 234 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL-------------FKKICDG-IFY 234 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH-------------HHHHHTT-CCC
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH-------------HHHHhcC-CcC
Confidence 2234579999999999988765 6899999999999999999999976322110 1111111 111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. .....+.+++..|++.||++|||+.++++
T Consensus 235 ~p~-------~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 TPQ-------YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CCT-------TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCc-------cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 111 12345789999999999999999999986
No 141
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.7e-38 Score=330.55 Aligned_cols=257 Identities=25% Similarity=0.432 Sum_probs=209.1
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEcc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
.++|.+.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 46899999999999999999998888899999997543 234678899999999999999999999874 4689999999
Q ss_pred CCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCcc
Q 046240 554 PNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSM 632 (763)
Q Consensus 554 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 632 (763)
++++|.+++.... ..+++..+..++.|+++||+|| |+.+|+||||||+||++++++.+||+|||.++....... .
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-T 165 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-E
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-c
Confidence 9999999997542 2588999999999999999999 778999999999999999999999999999988653321 2
Q ss_pred ccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCc
Q 046240 633 TQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPP 711 (763)
Q Consensus 633 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 711 (763)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||........ .+.+.+......
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--------------~~~~~~~~~~~~ 231 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--------------IQNLERGYRMVR 231 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------------HHHHHTTCCCCC
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH--------------HHHHhcccCCCC
Confidence 2234456888999999988889999999999999999999 9999876332211 111111111000
Q ss_pred cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 712 EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 712 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
. ..+...+.+++..|++.+|++||++.++++.|++.+..
T Consensus 232 ~------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 232 P------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp C------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c------ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 0 12245689999999999999999999999999887654
No 142
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=351.78 Aligned_cols=278 Identities=20% Similarity=0.257 Sum_probs=210.8
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCC--ceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD--FKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 549 (763)
.++|.+.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 367999999999999999999765 58999999997543 233566789999999999999999999998765 77999
Q ss_pred EEccCCCChhhhhccCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe----cCCCcEEEeeecCce
Q 046240 550 LEYMPNGSLDIFLYSSTC--MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL----DEDMIAHLSDFGIAK 623 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll----~~~~~~kl~Dfgla~ 623 (763)
|||+++|+|.+++..... .+++..+..++.|++.||+|| |+.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH---HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999976432 389999999999999999999 77899999999999999 778889999999998
Q ss_pred ecCCCCCccccccccccccccCccccCC--------CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh---hhhhhhc
Q 046240 624 LLSGEDQSMTQTQTLATIGYMAPEYGIE--------RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL---SLKHWVN 692 (763)
Q Consensus 624 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~---~~~~~~~ 692 (763)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .+.....
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 764322 2234568999999998764 5678899999999999999999999975322111 1111111
Q ss_pred ccCChhHH---HHHHhhcC--CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 693 GLLPVSLM---EVVNKTLL--SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 693 ~~~~~~~~---~~i~~~l~--~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
+..+.... ........ ..........+.....+.+++..|++.||++||++.++++.+.+++.+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 11100000 00000000 0000001112345677899999999999999999999999998887763
No 143
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-38 Score=340.51 Aligned_cols=243 Identities=22% Similarity=0.296 Sum_probs=199.3
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 548 (763)
.++|...+.||+|+||+||+|... +|+.||+|+++.... ...+.+..|..+++.+ +||+|+++++++...+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 468999999999999999999775 578999999986532 2345678899999988 79999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|.+++...+ .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 999999999999987643 588999999999999999999 7789999999999999999999999999999864322
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+......
T Consensus 175 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-------------~~~i~~~~~~ 239 (353)
T 2i0e_A 175 G--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-------------FQSIMEHNVA 239 (353)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHCCCC
T ss_pred C--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH-------------HHHHHhCCCC
Confidence 2 123456799999999999999999999999999999999999999976432211 1112221111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINA 743 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~ 743 (763)
. |. ....++.+++..|+..+|++||++
T Consensus 240 ~-p~-------~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 240 Y-PK-------SMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp C-CT-------TSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred C-CC-------CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1 11 124568899999999999999964
No 144
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-38 Score=334.10 Aligned_cols=266 Identities=21% Similarity=0.273 Sum_probs=206.7
Q ss_pred HHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeee-ecCCceEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGC-SNDDFKALVL 550 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 550 (763)
..++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999975 578999999876442 234578899999999988777666655 6677889999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe---cCCCcEEEeeecCceecCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL---DEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~ 627 (763)
||+ +++|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 9999999986666799999999999999999999 77899999999999999 7889999999999988754
Q ss_pred CCCc-----cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 628 EDQS-----MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 628 ~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ......+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----------~~~~~~~ 230 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----------RQKYERI 230 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS----------SSHHHHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh----------hhhhhhh
Confidence 3321 122356789999999999999999999999999999999999999976322110 0111122
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
.......... .....++..+.+++..|++.+|++||+++++++.|++++++.
T Consensus 231 ~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 231 SEKKMSTPIE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHHSCHH---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hcccccchhh---hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 2221111100 000122457899999999999999999999999999988764
No 145
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.7e-38 Score=338.58 Aligned_cols=260 Identities=23% Similarity=0.368 Sum_probs=205.3
Q ss_pred HhccCcCceecccCCceEEEEEe------cCCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL------DDGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
.++|.+.+.||+|+||.||+|.. .+++.||||++... .......+.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46899999999999999999974 35778999999644 234556788999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhccCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC---CCcEEEe
Q 046240 547 ALVLEYMPNGSLDIFLYSST------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE---DMIAHLS 617 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~---~~~~kl~ 617 (763)
++||||+++++|.+++.... ..+++..+..++.|+++||.|| |+.+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L---H~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999997643 3588999999999999999999 7789999999999999984 4569999
Q ss_pred eecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCC
Q 046240 618 DFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLP 696 (763)
Q Consensus 618 Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 696 (763)
|||+++...............+++.|+|||++.+..++.++|||||||++|||+| |..||.......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------------ 253 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE------------ 253 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------------
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH------------
Confidence 9999986643333333344567899999999988899999999999999999999 999987633221
Q ss_pred hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 697 VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 697 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
..+.+......... ..+...+.+++..||+.+|++||++.++++.|..+..+
T Consensus 254 --~~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 254 --VLEFVTSGGRMDPP------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp --HHHHHHTTCCCCCC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --HHHHHhcCCCCCCC------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 11111111111111 11345688999999999999999999999999876654
No 146
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-38 Score=344.16 Aligned_cols=250 Identities=28% Similarity=0.308 Sum_probs=194.4
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHH-HHhCCCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEV-MKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|..+ ++.++||||+++++++...+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 367999999999999999999765 68899999997653 2233455667666 466899999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|.+++...+ .++......++.|++.||+|| |+++|+||||||+||+++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999987643 578888999999999999999 7789999999999999999999999999999864322
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. .......||+.|+|||++.+..++.++|||||||++|||++|..||........ ...++.....
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~-------------~~~i~~~~~~ 257 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-------------YDNILNKPLQ 257 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH-------------HHHHHHSCCC
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-------------HHHHHhcccC
Confidence 2 123456799999999999999999999999999999999999999976332211 1122222222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVL 750 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L 750 (763)
..+. ....+.+++..|++.||++||++.+.++.+
T Consensus 258 ~~~~--------~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 258 LKPN--------ITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp CCSS--------SCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CCCC--------CCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1111 234578999999999999999986544443
No 147
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.9e-38 Score=328.45 Aligned_cols=258 Identities=21% Similarity=0.249 Sum_probs=205.5
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH------HHHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA------RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
.++|.+.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467999999999999999999775 689999999875421 1356788999999999999999999999999999
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC----cEEEeeecCc
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM----IAHLSDFGIA 622 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~----~~kl~Dfgla 622 (763)
++||||+++++|.+++.... .+++..+..++.|+++||.|| |+.+++||||||+||+++.++ .+||+|||.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYL---HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999997543 589999999999999999999 778999999999999998877 8999999999
Q ss_pred eecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 623 KLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 623 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
....... ......+++.|+|||++.+..++.++||||||+++|||++|+.||........ ....
T Consensus 160 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~------------ 223 (283)
T 3bhy_A 160 HKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNI------------ 223 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHH------------
T ss_pred eeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHh------------
Confidence 8764322 22345689999999999989999999999999999999999999976432211 1111
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH--HHhhccc
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF--VLCEQFV 755 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~--~L~~~~~ 755 (763)
..................+.+++.+|++.+|++||++.++++ .++....
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 224 ----SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp ----HTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred ----HhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 111111111111223556889999999999999999999996 3444433
No 148
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.4e-38 Score=348.95 Aligned_cols=270 Identities=21% Similarity=0.248 Sum_probs=198.5
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecC-----Cc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSND-----DF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 545 (763)
.++|.+.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999664 6889999999753 234567789999999999999999999999766 57
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.|+||||++ ++|.+++... ..+++..+..++.|+++||+|| |+.+|+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~L---H~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFI---HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHH---HHCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999987 5999988764 3589999999999999999999 7789999999999999999999999999999887
Q ss_pred CCCCCc--------------------cccccccccccccCcccc-CCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhh
Q 046240 626 SGEDQS--------------------MTQTQTLATIGYMAPEYG-IERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAE 684 (763)
Q Consensus 626 ~~~~~~--------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~ 684 (763)
...... .......||++|+|||++ ....++.++||||+||++|||++|..||.......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~ 259 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccc
Confidence 533211 123556799999999985 56779999999999999999998766554311100
Q ss_pred ---------------------------hhhhhh---hc--------ccCChhHHHHHHhhcCCCccccHHHHHHHHHHHH
Q 046240 685 ---------------------------LSLKHW---VN--------GLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIF 726 (763)
Q Consensus 685 ---------------------------~~~~~~---~~--------~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~ 726 (763)
..+... .. ..........+...-...+.............+.
T Consensus 260 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 339 (432)
T 3n9x_A 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGI 339 (432)
T ss_dssp CCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH
T ss_pred cccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHH
Confidence 000000 00 0011112222222111111110011112356788
Q ss_pred HHHHHccccCcCCCCCHHHHHH
Q 046240 727 SLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 727 ~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+++.+|+..||++|||++|+++
T Consensus 340 dLl~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 340 NLLESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHhcCCcccCCCHHHHhc
Confidence 9999999999999999999986
No 149
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.1e-39 Score=338.96 Aligned_cols=268 Identities=20% Similarity=0.240 Sum_probs=198.4
Q ss_pred HhccCcC-ceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEEE
Q 046240 474 TNRFGRD-NLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 474 ~~~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.++|.+. +.||+|+||+||+|.. .+++.||||++........+.+.+|++++.++ +||||+++++++...+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 7899999999999975 47899999999765444456788999999985 7999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc---EEEeeecCceecCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI---AHLSDFGIAKLLSG 627 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~---~kl~Dfgla~~~~~ 627 (763)
||+++++|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++. +||+|||+++....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFL---HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999997643 588999999999999999999 6789999999999999988765 99999999876542
Q ss_pred CCC-----ccccccccccccccCccccCC-----CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccC-C
Q 046240 628 EDQ-----SMTQTQTLATIGYMAPEYGIE-----RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLL-P 696 (763)
Q Consensus 628 ~~~-----~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~-~ 696 (763)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... |..... +
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~ 243 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG---WDRGEACP 243 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC---C----CCH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc---ccccccch
Confidence 211 111223468999999998764 56889999999999999999999999764321110 100000 0
Q ss_pred hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 697 VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 697 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.....+......................+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0111111111111111111111223557899999999999999999999987
No 150
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=334.85 Aligned_cols=267 Identities=22% Similarity=0.302 Sum_probs=200.9
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
++|++.+.||+|+||+||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57999999999999999999775 58999999886442 2345677899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++++|..++.... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFC---HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 999999998876543 589999999999999999999 778999999999999999999999999999987653222
Q ss_pred cccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhhhhcccCChhHHHHHH-hhc
Q 046240 632 MTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKHWVNGLLPVSLMEVVN-KTL 707 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~i~-~~l 707 (763)
......+|..|+|||++.+ ..++.++|||||||++|||++|+.||......... .........+. ...... ...
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 235 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPR-HQQVFSTNQY 235 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH-HHHHHHTCGG
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccc-cccccccccc
Confidence 2234578999999998875 67899999999999999999999999764332211 11222221111 111111 110
Q ss_pred C-----CCccc--c-HHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 708 L-----SPPEK--D-FAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 708 ~-----~~~~~--~-~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. ..+.. . ..........+.+++..|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 00000 0 0000123456889999999999999999999985
No 151
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.3e-38 Score=341.65 Aligned_cols=252 Identities=21% Similarity=0.244 Sum_probs=192.7
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
.++|.+.+.||+|+||+||++... +++.||||++..... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999999765 789999999975432 235678999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc--EEEeeecCceecCCCCC
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI--AHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~~~~~~~~ 630 (763)
+++|+|.+++...+ .++...+..++.|+++||+|| |+++|+||||||+||+++.++. +||+|||+++......
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~L---H~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYC---HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 99999999986644 589999999999999999999 7789999999999999987765 9999999997542211
Q ss_pred ccccccccccccccCccccCCCCCCcc-hhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTR-SDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
......||+.|+|||++.+..++.+ +|||||||++|||++|+.||....... .....+......
T Consensus 173 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-------------~~~~~~~~~~~~ 237 (361)
T 3uc3_A 173 --QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-------------DYRKTIQRILSV 237 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-------------CHHHHHHHHHTT
T ss_pred --CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-------------HHHHHHHHHhcC
Confidence 2234579999999999988877665 899999999999999999997643211 111122221111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...... .......+.+++.+|++.+|++|||+.|+++
T Consensus 238 ~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 238 KYSIPD--DIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CCCCCT--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCCCC--cCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 111000 0012346789999999999999999999985
No 152
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.7e-39 Score=348.77 Aligned_cols=270 Identities=21% Similarity=0.310 Sum_probs=192.8
Q ss_pred HHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCC-CCccceEEeeeecCC--c
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIR-HRNLVKIISGCSNDD--F 545 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 545 (763)
...++|.+.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3467899999999999999999965 57899999998543 2344567789999999997 999999999997544 7
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.|+||||++ ++|..++... .++...+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYL---HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999998 5898888764 488899999999999999999 7889999999999999999999999999999876
Q ss_pred CCCCC-------------------ccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh
Q 046240 626 SGEDQ-------------------SMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL 685 (763)
Q Consensus 626 ~~~~~-------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 685 (763)
..... ........||++|+|||++.+ ..++.++||||+||++|||++|+.||........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 42111 112234579999999999876 6789999999999999999999999976432211
Q ss_pred hhhhhh---cc--------cCChhHHHHHHhh---c---CCCccccHHH----------HHHHHHHHHHHHHHccccCcC
Q 046240 686 SLKHWV---NG--------LLPVSLMEVVNKT---L---LSPPEKDFAA----------KEQCVLSIFSLAMECTMELPE 738 (763)
Q Consensus 686 ~~~~~~---~~--------~~~~~~~~~i~~~---l---~~~~~~~~~~----------~~~~~~~l~~l~~~cl~~~P~ 738 (763)
+.... .. .........+... . .......+.. ...+...+.+++.+|+..||+
T Consensus 240 -~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 240 -LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp -HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred -HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 11111 00 0001111111110 0 0000000000 002245688999999999999
Q ss_pred CCCCHHHHHH
Q 046240 739 KRINAKCCNF 748 (763)
Q Consensus 739 ~Rps~~~v~~ 748 (763)
+|||++|+++
T Consensus 319 ~R~t~~e~l~ 328 (388)
T 3oz6_A 319 KRISANDALK 328 (388)
T ss_dssp GSCCHHHHTT
T ss_pred cCCCHHHHhC
Confidence 9999999986
No 153
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=8.1e-38 Score=325.42 Aligned_cols=246 Identities=23% Similarity=0.321 Sum_probs=200.3
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 468999999999999999999665 678999999975432 2346788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||+++++|.+++.... .++...+..++.|++.||.|| |+.+|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 99999999999987643 588999999999999999999 7889999999999999999999999999998654322
Q ss_pred CccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 630 QSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
......|++.|+|||.+.+..++.++||||||+++|||++|..||........ ...+......
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------------~~~~~~~~~~ 225 (279)
T 3fdn_A 163 ---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------YKRISRVEFT 225 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------------HHHHHHTCCC
T ss_pred ---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH--------------HHHHHhCCCC
Confidence 22345789999999999999999999999999999999999999976332211 1111111111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. .....+.+++..|++.+|++||++.|+++
T Consensus 226 ~~~-------~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 226 FPD-------FVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp CCT-------TSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CCC-------cCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111 12445789999999999999999999995
No 154
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.8e-38 Score=335.78 Aligned_cols=262 Identities=24% Similarity=0.329 Sum_probs=199.1
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh---hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE---CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++... .......+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 46799999999999999999975 57899999998742 234567788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 550 LEYMPNGSLDIFLYS---STCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
|||+++++|.+++.. ....++...+..++.++++||.|| |+.+++||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864 334688999999999999999999 77899999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
.... ......+++.|+|||++.+..++.++||||||+++|||++|+.||.......... ...+...
T Consensus 188 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~------------~~~~~~~ 253 (310)
T 2wqm_A 188 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL------------CKKIEQC 253 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH------------HHHHHTT
T ss_pred CCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH------------HHHhhcc
Confidence 3221 2234568999999999999999999999999999999999999986532111111 1111111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
-. +... ...+...+.+++..||+.||++||++.+|++.|+++....
T Consensus 254 ~~--~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 254 DY--PPLP---SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp CS--CCCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cC--CCCc---ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 00 0000 0112456889999999999999999999999998876553
No 155
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.2e-38 Score=326.14 Aligned_cols=245 Identities=22% Similarity=0.342 Sum_probs=178.9
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999975 478999999987542 223567889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+ ++++.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYC---HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence 999 667777766543 589999999999999999999 77899999999999999999999999999998764322
Q ss_pred ccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||........ ...+......
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------------~~~~~~~~~~ 230 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL--------------FKNISNGVYT 230 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------------HHHHHHTCCC
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--------------HHHHHhCCCC
Confidence 2234568999999999887765 7899999999999999999999976332211 1111111111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. .....+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~-------~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 231 LPK-------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCT-------TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCc-------cCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 111 12445789999999999999999999975
No 156
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.8e-38 Score=350.82 Aligned_cols=265 Identities=22% Similarity=0.188 Sum_probs=195.7
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecC------C
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSND------D 544 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 544 (763)
.++|++.+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999965 46899999999754 234567788999999999999999999999654 3
Q ss_pred ceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 545 FKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 545 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
..|+||||++++ +.+.+.. .+++..+..++.|+++||+|| |+.+|+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~---~l~~~~~~~~~~qil~aL~~l---H~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCCC-HHHHHhh---cCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 569999999875 5555533 378899999999999999999 778999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhhhhcccC-------
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKHWVNGLL------- 695 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~~~~~~------- 695 (763)
.... .......||++|+|||++.+..++.++||||+||++|||++|+.||.+....... .........
T Consensus 214 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~ 290 (464)
T 3ttj_A 214 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290 (464)
T ss_dssp ---C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred cCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence 6432 2234567999999999999999999999999999999999999999764322111 111111111
Q ss_pred ChhHHHHHHhhcCCCcc------------ccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 696 PVSLMEVVNKTLLSPPE------------KDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 696 ~~~~~~~i~~~l~~~~~------------~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.......+...-..... ............+.+++.+|+..||++|||++|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11111221111000000 001111223567899999999999999999999986
No 157
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-38 Score=341.31 Aligned_cols=277 Identities=23% Similarity=0.241 Sum_probs=210.1
Q ss_pred cCCCChHHHHHHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-----CCccce
Q 046240 462 KRRLPYQDLSRATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIR-----HRNLVK 535 (763)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~ 535 (763)
...+++.+.....++|.+.+.||+|+||+||+|.. .+++.||||++.... .....+..|+.+++.+. ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 44455555556678999999999999999999976 478899999997432 33456778999999986 999999
Q ss_pred EEeeeecCCceEEEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC----
Q 046240 536 IISGCSNDDFKALVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE---- 610 (763)
Q Consensus 536 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~---- 610 (763)
+++++...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+|| |+++|+||||||+||+++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL---RKMSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCcccEEEcccccc
Confidence 999999999999999999 889999987654 3588999999999999999999 7889999999999999975
Q ss_pred ---------------------CCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHH
Q 046240 611 ---------------------DMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIE 669 (763)
Q Consensus 611 ---------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 669 (763)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 789999999999875422 234568999999999999999999999999999999
Q ss_pred HHcCCCCCchhhhhhh-hhhhhhcccCChhHH-HHHHhh----cC------CCcccc--H-----------HHHHHHHHH
Q 046240 670 TFTRKKPADKMFAAEL-SLKHWVNGLLPVSLM-EVVNKT----LL------SPPEKD--F-----------AAKEQCVLS 724 (763)
Q Consensus 670 lltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~-~~i~~~----l~------~~~~~~--~-----------~~~~~~~~~ 724 (763)
|++|+.||........ ..........+.... +..... .. ..+... . .........
T Consensus 252 ll~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 9999999976432221 111111122222111 110000 00 000000 0 000111256
Q ss_pred HHHHHHHccccCcCCCCCHHHHHH
Q 046240 725 IFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 725 l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.+++..|++.||++|||++|+++
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhcCChhhCCCHHHHhc
Confidence 789999999999999999999875
No 158
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=352.61 Aligned_cols=316 Identities=19% Similarity=0.214 Sum_probs=289.0
Q ss_pred cccceeecCC---------CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccE
Q 046240 66 NWIGITCDVN---------SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKA 136 (763)
Q Consensus 66 ~w~gv~c~~~---------~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~ 136 (763)
.|..|.|... ..+++.|+|++|+|++..+..|.++++|++|+|++|.++ .+++..|.++++|++
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-------~~~~~~~~~l~~L~~ 84 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS-------AVEPGAFNNLFNLRT 84 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC-------EECTTTTTTCTTCCE
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccC-------EeChhhhhCCccCCE
Confidence 3567788542 257999999999999888999999999999999999996 676667779999999
Q ss_pred EEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEe
Q 046240 137 LSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYI 216 (763)
Q Consensus 137 L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L 216 (763)
|+|++|+|+++.+..|.++++|++|+|++|++++..|..|.++++|+.|+ +++|.+++..|..|.++. +|++|+|
T Consensus 85 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~----l~~n~l~~~~~~~~~~l~-~L~~L~l 159 (477)
T 2id5_A 85 LGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE----VGDNDLVYISHRAFSGLN-SLEQLTL 159 (477)
T ss_dssp EECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE----ECCTTCCEECTTSSTTCT-TCCEEEE
T ss_pred EECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE----CCCCccceeChhhccCCC-CCCEEEC
Confidence 99999999988888899999999999999999999999999999999999 889999999999999998 9999999
Q ss_pred ecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEccccc
Q 046240 217 SNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNN 296 (763)
Q Consensus 217 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~ 296 (763)
++|++++..+..|..+++|+.|+|++|.+++..+..|..+++ |+.|++++|.+.+.+|. ......+|++|+|++|+
T Consensus 160 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~--L~~L~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 160 EKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR--LKVLEISHWPYLDTMTP--NCLYGLNLTSLSITHCN 235 (477)
T ss_dssp ESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTT--CCEEEEECCTTCCEECT--TTTTTCCCSEEEEESSC
T ss_pred CCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcc--cceeeCCCCccccccCc--ccccCccccEEECcCCc
Confidence 999999888888999999999999999999888889999977 99999999998888887 55566699999999999
Q ss_pred ccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC
Q 046240 297 FSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG 376 (763)
Q Consensus 297 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 376 (763)
+++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++++.|..|..+++|+.|+|++|++++.++..
T Consensus 236 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 236 LTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp CCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGG
T ss_pred ccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhH
Confidence 99666678999999999999999999888889999999999999999999999999999999999999999999877754
Q ss_pred -CCccccccccccCCCcccCCC
Q 046240 377 -GPFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 377 -~~~~~l~~~~~~~n~~~c~~p 397 (763)
..++.+..+++.+|++.|+|+
T Consensus 316 ~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 316 FHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp BSCGGGCCEEECCSSCEECSGG
T ss_pred cCCCcccCEEEccCCCccCccc
Confidence 567889999999999999986
No 159
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.6e-38 Score=331.27 Aligned_cols=260 Identities=24% Similarity=0.368 Sum_probs=207.0
Q ss_pred HhccCcCc-eecccCCceEEEEEec---CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceE
Q 046240 474 TNRFGRDN-LIGIGSFGYVYKAELD---DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKA 547 (763)
Q Consensus 474 ~~~~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 547 (763)
.++|.+.+ .||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 46788887 9999999999999542 46889999997543 23356789999999999999999999999 566789
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCC
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 627 (763)
+||||+++++|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHH---HhCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999997654 588999999999999999999 778999999999999999999999999999987754
Q ss_pred CCCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 628 EDQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 628 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
.... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ..+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------------~~~~~~~ 235 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------------VTAMLEK 235 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------------HHHHHHT
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--------------HHHHHHc
Confidence 3322 12233446788999999988889999999999999999999 999997643221 1111111
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
... +.. ...+...+.+++..||+.||++||++.++++.|++.+.+.+
T Consensus 236 ~~~--~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 236 GER--MGC----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp TCC--CCC----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred CCC--CCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 110 000 01235568999999999999999999999999998877643
No 160
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1e-37 Score=337.35 Aligned_cols=256 Identities=22% Similarity=0.335 Sum_probs=205.5
Q ss_pred HHHHHHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--------HHHHHHHHHHHHHHHhC-CCCccceEEe
Q 046240 469 DLSRATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--------ARAMKSFEVECEVMKNI-RHRNLVKIIS 538 (763)
Q Consensus 469 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~l~~ 538 (763)
......++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 34456688999999999999999999775 79999999986432 12346678999999999 7999999999
Q ss_pred eeecCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEee
Q 046240 539 GCSNDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSD 618 (763)
Q Consensus 539 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~D 618 (763)
++...+..++||||+++++|.+++.... .+++..+..++.|++.||.|| |+.+|+||||||+||+++.++.+||+|
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFL---HANNIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEEEe
Confidence 9999999999999999999999987543 589999999999999999999 678999999999999999999999999
Q ss_pred ecCceecCCCCCccccccccccccccCccccC------CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhc
Q 046240 619 FGIAKLLSGEDQSMTQTQTLATIGYMAPEYGI------ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVN 692 (763)
Q Consensus 619 fgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~ 692 (763)
||++..+.... ......||+.|+|||++. ...++.++|||||||++|||++|..||........ ...
T Consensus 244 fG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~--- 316 (365)
T 2y7j_A 244 FGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM-LRM--- 316 (365)
T ss_dssp CTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH---
T ss_pred cCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH-HHH---
Confidence 99998775332 223467899999999875 34688999999999999999999999976322110 111
Q ss_pred ccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 693 GLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 693 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+..... .............+.+++.+|++.||++||++.++++
T Consensus 317 ---------i~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 317 ---------IMEGQY----QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ---------HHHTCC----CCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---------HHhCCC----CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111100 0001111123456889999999999999999999986
No 161
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.4e-38 Score=331.18 Aligned_cols=265 Identities=21% Similarity=0.274 Sum_probs=209.0
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeee-ecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGC-SNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999976 679999999986542 234578899999999988866666555 66678899999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe---cCCCcEEEeeecCceecCCC
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL---DEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~ 628 (763)
|+ +++|.+++......+++..+..++.|+++||+|| |+++|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI---HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 8999999986666799999999999999999999 77899999999999999 47889999999999887543
Q ss_pred CCc-----cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHH
Q 046240 629 DQS-----MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVV 703 (763)
Q Consensus 629 ~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 703 (763)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+.
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------~~~~~~~~~ 231 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT----------KRQKYERIS 231 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS----------SSSHHHHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchh----------hhhhhhhhc
Confidence 321 11245579999999999999999999999999999999999999997632111 001111122
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
......... .....++..+.+++..||+.+|++||++.++++.|+++..+.
T Consensus 232 ~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 232 EKKMSTPIE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHSCHH---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ccccCCchH---HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 211111100 001123456899999999999999999999999999888764
No 162
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.6e-37 Score=323.98 Aligned_cols=251 Identities=23% Similarity=0.292 Sum_probs=205.8
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 67999999999999999999765 678999999976532 22467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++++|.+++...+ .+++.....++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYC---HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--
T ss_pred EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCHHHEEEcCCCCEEEecccccccCccc--
Confidence 9999999999987654 588999999999999999999 7889999999999999999999999999999765422
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
......|++.|+|||++.+..++.++||||||+++|||++|+.||........ ...+...... .
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------------~~~~~~~~~~-~ 231 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-------------HRRIVNVDLK-F 231 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHTTCCC-C
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-------------HHHHhccccC-C
Confidence 12345689999999999999999999999999999999999999976432211 0111111111 1
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH--HHhhcc
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF--VLCEQF 754 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~--~L~~~~ 754 (763)
+. .....+.+++..|++.+|++||+++++++ .+....
T Consensus 232 ~~-------~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 232 PP-------FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp CT-------TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred CC-------cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence 11 12446789999999999999999999985 444433
No 163
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.3e-38 Score=350.67 Aligned_cols=195 Identities=24% Similarity=0.363 Sum_probs=153.8
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeec-----CCc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSN-----DDF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~ 545 (763)
.++|.+.+.||+|+||+||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 368999999999999999999654 7899999998653 23456778899999999999999999999943 357
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.|+||||++ ++|..++.... .+++..+..++.||++||+|| |+.+|+||||||+|||++.++.+||+|||+++.+
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYV---HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccCC-CCCHHHHHHHHHHHHHHHHHH---HhCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999985 68888886543 689999999999999999999 7789999999999999999999999999999876
Q ss_pred CCCCCc-------------------------cccccccccccccCcccc-CCCCCCcchhHHHHHHHHHHHHcC
Q 046240 626 SGEDQS-------------------------MTQTQTLATIGYMAPEYG-IERKVSTRSDIYSYGIMLIETFTR 673 (763)
Q Consensus 626 ~~~~~~-------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slGv~l~elltg 673 (763)
...... ......+||++|+|||++ .+..++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 422111 123455789999999975 567799999999999999999994
No 164
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.1e-39 Score=364.65 Aligned_cols=259 Identities=27% Similarity=0.461 Sum_probs=210.9
Q ss_pred HHhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
..++|.+.+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 356788999999999999999999888899999997543 234678999999999999999999999876 678999999
Q ss_pred cCCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 553 MPNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 553 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
+++|+|.+++... ...+++..+..++.||++||+|| |+++|+||||||+|||++.++.+||+|||+++.+.... .
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 418 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 418 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-H
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-e
Confidence 9999999999753 23588999999999999999999 77899999999999999999999999999998764211 1
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||......+ ..+.+.......
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--------------~~~~i~~~~~~~ 484 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--------------VLDQVERGYRMP 484 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--------------HHHHHHTTCCCC
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcCCCCC
Confidence 12233456788999999988899999999999999999999 999997643221 111111111100
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
. ...+...+.+++..||+.+|++||++++|+++|++++...
T Consensus 485 ~------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 485 C------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp C------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred C------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 0 1123567899999999999999999999999999887653
No 165
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-38 Score=339.06 Aligned_cols=262 Identities=24% Similarity=0.283 Sum_probs=197.0
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCC------
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD------ 544 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 544 (763)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999976 57899999998543 2334567889999999999999999999997653
Q ss_pred ceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 545 FKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 545 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
..|+||||+ +++|.+++... .++...+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYI---HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 78999998764 488999999999999999999 778999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhh--cccC------
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWV--NGLL------ 695 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~--~~~~------ 695 (763)
.... .....+|++|+|||++.+ ..++.++||||+||++|||++|+.||........ +.... .+..
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ-LKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHH
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHH
Confidence 5422 234578999999998876 7899999999999999999999999976432211 11111 1111
Q ss_pred ---ChhHHHHHHhhcCCCccccH-HHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 696 ---PVSLMEVVNKTLLSPPEKDF-AAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 696 ---~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+......+.. +...+.... .........+.+++.+|+..||++|||+.++++
T Consensus 252 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 252 RLQSDEAKNYMKG-LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp TCSCHHHHHHHHH-SCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhhhHHHHHHHHh-CCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 1122222222 111111111 001122456889999999999999999999987
No 166
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=368.40 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=203.0
Q ss_pred ccCcCc-eecccCCceEEEEEec---CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 476 RFGRDN-LIGIGSFGYVYKAELD---DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 476 ~~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 333344 7999999999999764 46679999997542 2346778999999999999999999999976 5689999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++|+|.+++......+++..+..++.|+++||+|| |+++|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999987666799999999999999999999 778999999999999999999999999999987643322
Q ss_pred c-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 631 S-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 631 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. .......+++.|+|||++.+..++.++|||||||++|||+| |+.||......+ ..+.+.....
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------------~~~~i~~~~~ 557 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------------VMAFIEQGKR 557 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--------------HHHHHHTTCC
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--------------HHHHHHcCCC
Confidence 1 11223345689999999998999999999999999999998 999997643221 1111211110
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
.. ....+...+.+++..||+.+|++||++.+|++.|+..+.+
T Consensus 558 ~~------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 558 ME------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CC------CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CC------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 00 0112456789999999999999999999999999887655
No 167
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=334.60 Aligned_cols=269 Identities=26% Similarity=0.291 Sum_probs=197.5
Q ss_pred HHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh-----HHHHHHHHHHHHHHHhC---CCCccceEEeeeecC
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC-----ARAMKSFEVECEVMKNI---RHRNLVKIISGCSND 543 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~ 543 (763)
..++|++.+.||+|+||+||+|.. .+++.||+|++.... ......+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467999999999999999999976 578999999986432 11234556777777766 499999999999765
Q ss_pred C-----ceEEEEEccCCCChhhhhccCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEe
Q 046240 544 D-----FKALVLEYMPNGSLDIFLYSSTC-MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLS 617 (763)
Q Consensus 544 ~-----~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~ 617 (763)
. ..++||||++ ++|.+++..... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5 5789999997 499998876543 489999999999999999999 77899999999999999999999999
Q ss_pred eecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhh--hhhcccC
Q 046240 618 DFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLK--HWVNGLL 695 (763)
Q Consensus 618 Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~--~~~~~~~ 695 (763)
|||+++.+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........... .......
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999998764222 23456789999999999999999999999999999999999999976433221111 1000000
Q ss_pred ChhHHH---HHHhhcC-CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 696 PVSLME---VVNKTLL-SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 696 ~~~~~~---~i~~~l~-~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...+.. +...... ..+.............+.+++.+|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 000000 0000000 0000000111123456889999999999999999999876
No 168
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.5e-38 Score=332.49 Aligned_cols=251 Identities=22% Similarity=0.267 Sum_probs=201.5
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
..++|.+.+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 4578999999999999999999765 789999999986544445678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe---cCCCcEEEeeecCceecCCC
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL---DEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~ 628 (763)
|+++++|.+++.... .+++.....++.|++.||.|| |+.+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYL---HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999999886543 588999999999999999999 77899999999999999 78899999999998764321
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
......|++.|+|||++.+..++.++|||||||++|||++|+.||........ ... +......
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~------------i~~~~~~ 225 (304)
T 2jam_A 163 ----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL-FEK------------IKEGYYE 225 (304)
T ss_dssp ----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHH------------HHHCCCC
T ss_pred ----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHH------------HHcCCCC
Confidence 22334689999999999999999999999999999999999999976332211 111 1111110
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+.. ........+.+++..|++.||++||++.++++
T Consensus 226 -~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 226 -FESP---FWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp -CCTT---TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred -CCcc---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000 00122456889999999999999999999985
No 169
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-38 Score=331.41 Aligned_cols=250 Identities=27% Similarity=0.323 Sum_probs=196.9
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH-HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA-RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 468999999999999999999764 689999999976542 235778899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe---cCCCcEEEeeecCceec
Q 046240 552 YMPNGSLDIFLYSS---TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL---DEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 552 ~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~ 625 (763)
|+++|+|.+++... ...+++..+..++.|+++||+|| |+.+|+||||||+||++ +.++.+||+|||+++.+
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~L---H~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF---HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988542 34689999999999999999999 77899999999999999 45678999999999876
Q ss_pred CCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
.... ......|++.|+|||++. +.++.++|||||||++|||++|+.||............. ..
T Consensus 178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~-------------~~ 240 (285)
T 3is5_A 178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT-------------YK 240 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-------------HC
T ss_pred CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhc-------------cC
Confidence 4322 223456899999999875 568999999999999999999999997643222111100 00
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
......... .....+.+++..|++.||++||++.|+++
T Consensus 241 ~~~~~~~~~-----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 241 EPNYAVECR-----PLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCCCCC--C-----CCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CcccccccC-----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000000 02345789999999999999999999985
No 170
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=344.42 Aligned_cols=265 Identities=14% Similarity=0.106 Sum_probs=205.0
Q ss_pred HhccCcCceecccCCceEEEEEec---------CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccce---------
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD---------DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVK--------- 535 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 535 (763)
.++|.+.+.||+|+||.||+|... +++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 368999999999999999999765 3789999998754 45778999999999999988
Q ss_pred ------EEeeeec-CCceEEEEEccCCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEE
Q 046240 536 ------IISGCSN-DDFKALVLEYMPNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVL 607 (763)
Q Consensus 536 ------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIl 607 (763)
+++++.. .+..++||||+ +++|.+++... ...+++..+..++.|+++||+|| |+++|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFL---HENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCCHHHEE
Confidence 5666665 67889999999 99999999865 34689999999999999999999 7789999999999999
Q ss_pred ecCCC--cEEEeeecCceecCCCCCc-----cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchh
Q 046240 608 LDEDM--IAHLSDFGIAKLLSGEDQS-----MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKM 680 (763)
Q Consensus 608 l~~~~--~~kl~Dfgla~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~ 680 (763)
++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876432211 1123457999999999999999999999999999999999999999874
Q ss_pred hhhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 681 FAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
........... ..+ .......... ..........+.+++..|++.||++||+++++++.|++++.+.
T Consensus 272 ~~~~~~~~~~~--------~~~-~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 272 LPNTEDIMKQK--------QKF-VDKPGPFVGP-CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TTCHHHHHHHH--------HHH-HHSCCCEECT-TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHH--------Hhc-cCChhhhhhh-ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 32211111110 000 0000000000 0000011456899999999999999999999999999888764
No 171
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.3e-38 Score=330.42 Aligned_cols=262 Identities=26% Similarity=0.390 Sum_probs=199.1
Q ss_pred HhccCcCceecccCCceEEEEEec--CCc--eEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD--DGI--EVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
.++|++.+.||+|+||+||+|.+. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 468999999999999999999753 333 68999887542 234577889999999999999999999998765 8
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
++|+||+++++|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHH---HhCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 899999999999999987655689999999999999999999 67899999999999999999999999999998875
Q ss_pred CCCCc-cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHH
Q 046240 627 GEDQS-MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVN 704 (763)
Q Consensus 627 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 704 (763)
..... .......++..|+|||++.+..++.++||||||+++|||++ |+.||........ ...+.
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--------------~~~~~ 238 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI--------------LHKID 238 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------------HHHHH
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH--------------HHHHH
Confidence 43322 12234557888999999988889999999999999999999 9999976432211 00111
Q ss_pred hhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 705 KTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 705 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
......+. ...+...+.+++..|++.+|++||++.++++.|++....+.
T Consensus 239 ~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 239 KEGERLPR-----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp TSCCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred ccCCCCCC-----CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 11001111 01235568999999999999999999999999998876654
No 172
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=338.98 Aligned_cols=243 Identities=25% Similarity=0.370 Sum_probs=201.4
Q ss_pred HHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhH--------HHHHHHHHHHHHHHhCCCCccceEEeeeecC
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECA--------RAMKSFEVECEVMKNIRHRNLVKIISGCSND 543 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 543 (763)
..++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999965 5789999999975421 1233567799999999999999999999999
Q ss_pred CceEEEEEccCCC-ChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCc
Q 046240 544 DFKALVLEYMPNG-SLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIA 622 (763)
Q Consensus 544 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 622 (763)
+..++||||+.+| +|.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYL---RLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999887654 589999999999999999999 7789999999999999999999999999999
Q ss_pred eecCCCCCccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHH
Q 046240 623 KLLSGEDQSMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLME 701 (763)
Q Consensus 623 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (763)
+...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... ..
T Consensus 178 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~-------- 239 (335)
T 3dls_A 178 AYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-------EA-------- 239 (335)
T ss_dssp EECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-------TT--------
T ss_pred eECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-------hh--------
Confidence 8865332 2234568999999999888776 789999999999999999999997632210 00
Q ss_pred HHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 046240 702 VVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFV 749 (763)
Q Consensus 702 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~ 749 (763)
.. ..+.. +...+.+++..|++.+|++||++.++++-
T Consensus 240 ----~~-~~~~~-------~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 ----AI-HPPYL-------VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----CC-CCSSC-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----cc-CCCcc-------cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 01111 23458899999999999999999999873
No 173
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.2e-38 Score=352.28 Aligned_cols=248 Identities=24% Similarity=0.300 Sum_probs=194.6
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999965 478999999998652 23345677899999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHT-TPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~-~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
|||+++|+|..++.... .+++..+..++.|+++||+|| |+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---hhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999987644 689999999999999999999 65 89999999999999999999999999999864322
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.....
T Consensus 303 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-------------~~~i~~~~~- 366 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-------------FELILMEEI- 366 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHHCCC-
T ss_pred C--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-------------HHHHHhCCC-
Confidence 2 223456799999999999999999999999999999999999999976332211 011111111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRI-----NAKCCNF 748 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~v~~ 748 (763)
..+. .....+.+++..|++.||++|| +++|+++
T Consensus 367 ~~p~-------~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 RFPR-------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCCT-------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCc-------cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1111 1245688999999999999999 9999875
No 174
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.7e-38 Score=338.55 Aligned_cols=258 Identities=29% Similarity=0.436 Sum_probs=205.0
Q ss_pred hccCcCceecccCCceEEEEEec-CCce--EEEEEeehhh-HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIE--VAIKVFHQEC-ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 549 (763)
++|...+.||+|+||.||+|... ++.. ||+|++.... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 68999999999999999999664 5664 4999887532 33456788999999999 899999999999999999999
Q ss_pred EEccCCCChhhhhccCC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcE
Q 046240 550 LEYMPNGSLDIFLYSST---------------CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIA 614 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~ 614 (763)
|||+++++|.+++.... ..+++..+..++.|+++||+|| |+++|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH---HhCCccCCCCccceEEEcCCCeE
Confidence 99999999999997643 3689999999999999999999 77899999999999999999999
Q ss_pred EEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcc
Q 046240 615 HLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNG 693 (763)
Q Consensus 615 kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 693 (763)
||+|||+++.... ........+++.|+|||++.+..++.++|||||||++|||+| |+.||........
T Consensus 182 kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~-------- 250 (327)
T 1fvr_A 182 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-------- 250 (327)
T ss_dssp EECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------
T ss_pred EEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH--------
Confidence 9999999875321 112233456889999999988889999999999999999998 9999976432211
Q ss_pred cCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccCc
Q 046240 694 LLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSNS 758 (763)
Q Consensus 694 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~~ 758 (763)
.+.+......... ..+...+.+++.+|++.+|++||++.++++.|.+++.+..
T Consensus 251 ------~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 251 ------YEKLPQGYRLEKP------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp ------HHHGGGTCCCCCC------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred ------HHHhhcCCCCCCC------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0111111000000 1124568899999999999999999999999998877653
No 175
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.8e-38 Score=333.91 Aligned_cols=262 Identities=19% Similarity=0.261 Sum_probs=202.2
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CCccceEEeeeec--CCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIR-HRNLVKIISGCSN--DDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv 549 (763)
.++|++.+.||+|+||+||+|.. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36899999999999999999965 578999999987442 356789999999997 9999999999987 5678999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC-cEEEeeecCceecCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM-IAHLSDFGIAKLLSGE 628 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~-~~kl~Dfgla~~~~~~ 628 (763)
|||+++++|.+++.. ++...+..++.|+++||+|| |+.+|+||||||+||+++.++ .+||+|||+++.+...
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYC---HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999998853 78889999999999999999 778999999999999999776 8999999999876533
Q ss_pred CCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.........+........+....+.+++.-
T Consensus 185 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred C---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 2 2234578999999999876 67899999999999999999999999543222222222221111222222222111
Q ss_pred CC-----------Ccccc------HHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 708 LS-----------PPEKD------FAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 708 ~~-----------~~~~~------~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.. ....+ ..........+.+++.+|++.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 10 00000 0001113567899999999999999999999986
No 176
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.3e-38 Score=345.81 Aligned_cols=253 Identities=22% Similarity=0.239 Sum_probs=192.8
Q ss_pred HHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhH--------HHHHHHHHHHHHHHhCCCCccceEEeeeec
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECA--------RAMKSFEVECEVMKNIRHRNLVKIISGCSN 542 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 542 (763)
...++|.+.+.||+|+||+||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 4568999999999999999999965 4689999999975421 122357889999999999999999999865
Q ss_pred CCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC---CcEEEeee
Q 046240 543 DDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED---MIAHLSDF 619 (763)
Q Consensus 543 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~---~~~kl~Df 619 (763)
+..++||||+++|+|.+++.... .+++.....++.|+++||+|| |+.+|+||||||+||+++.+ +.+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCCCcceEEEeec
Confidence 45789999999999999887654 689999999999999999999 67899999999999999754 45999999
Q ss_pred cCceecCCCCCccccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCC
Q 046240 620 GIAKLLSGEDQSMTQTQTLATIGYMAPEYGI---ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLP 696 (763)
Q Consensus 620 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 696 (763)
|+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........
T Consensus 287 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~----------- 352 (419)
T 3i6u_A 287 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS----------- 352 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-----------
T ss_pred ccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-----------
Confidence 9998764322 223457899999999975 36788899999999999999999999975322111
Q ss_pred hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 697 VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 697 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+.+.... ....+.........+.+++.+|++.||++||++.|+++
T Consensus 353 --~~~~i~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 353 --LKDQITSGK---YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp --HHHHHHTTC---CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --HHHHHhcCC---CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 111111111 11111111223567899999999999999999999986
No 177
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=338.39 Aligned_cols=268 Identities=20% Similarity=0.231 Sum_probs=196.8
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHH-HHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECAR-AMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
++|.+.+.||+|+||+||+|... +++.||+|++...... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999765 7899999998754322 222455799999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCcc
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSM 632 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 632 (763)
++ |+|.+++...+..+++..+..++.|++.||.|| |+.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC---HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 98 488888877666789999999999999999999 77899999999999999999999999999998654222 1
Q ss_pred ccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhhhhcccCChhH------HHHH
Q 046240 633 TQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKHWVNGLLPVSL------MEVV 703 (763)
Q Consensus 633 ~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~------~~~i 703 (763)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .........+..+ .+..
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence 2334568999999998876 67899999999999999999999999764332211 1111111111000 0000
Q ss_pred HhhcCCC-ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 704 NKTLLSP-PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 704 ~~~l~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
....... ..............+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 00001111123456789999999999999999999986
No 178
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7e-38 Score=352.55 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=204.5
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|...+.||+|+||.||+|... +|+.||+|++..... .....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999765 799999999976532 2345678899999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 550 LEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
|||++||+|.+++...+ ..+++..+..++.||+.||+|| |+.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL---H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL---HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987643 3589999999999999999999 6789999999999999999999999999999887533
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+...+...-.
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~----------~~~~i~~~i~~~~~ 406 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI----------KREEVERLVKEVPE 406 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC----------CHHHHHHHHHHCCC
T ss_pred c---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch----------hHHHHHHHhhcccc
Confidence 2 2234579999999999999999999999999999999999999997632110 00111122211111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRI-----NAKCCNF 748 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~v~~ 748 (763)
..+ ......+.+++..|++.||++|| +++||++
T Consensus 407 ~~p-------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 EYS-------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCC-------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cCC-------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 111 11245688999999999999999 6777763
No 179
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=6.6e-38 Score=326.84 Aligned_cols=250 Identities=23% Similarity=0.316 Sum_probs=204.2
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeec---------
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSN--------- 542 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 542 (763)
...+|+..+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4578999999999999999999775 78999999997543 345689999999999999999998854
Q ss_pred -------CCceEEEEEccCCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcE
Q 046240 543 -------DDFKALVLEYMPNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIA 614 (763)
Q Consensus 543 -------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~ 614 (763)
....++||||+++++|.+++... ...+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYI---HSKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHEEEcCCCCE
Confidence 34579999999999999999754 34689999999999999999999 67899999999999999999999
Q ss_pred EEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhccc
Q 046240 615 HLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGL 694 (763)
Q Consensus 615 kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 694 (763)
||+|||+++...... ......+++.|+|||++.+..++.++||||||+++|||++|..|+.......
T Consensus 162 kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---------- 228 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF---------- 228 (284)
T ss_dssp EECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHH----------
T ss_pred EECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHH----------
Confidence 999999998775332 2234568999999999999999999999999999999999999875421110
Q ss_pred CChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 695 LPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 695 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
..+....+ +. .....+.+++..|++.||++||++.++++.+.....+.
T Consensus 229 -----~~~~~~~~---~~-------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 229 -----TDLRDGII---SD-------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp -----HHHHTTCC---CT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred -----HHhhcccc---cc-------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 01111111 00 12345789999999999999999999999998766553
No 180
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.4e-37 Score=326.19 Aligned_cols=248 Identities=21% Similarity=0.278 Sum_probs=204.7
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 468999999999999999999765 58899999987542 33456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||+++++|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||.++......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999886543 588999999999999999999 77899999999999999999999999999998764322
Q ss_pred CccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 630 QSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......... ..+..... .
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-------------~~~~~~~~-~ 233 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-------------LRIKKNEY-S 233 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-------------HHHHTTCC-C
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------------HHHhhccC-C
Confidence 2 223456899999999999989999999999999999999999999764322110 01111101 1
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. .....+.+++.+|++.+|++||+++++++
T Consensus 234 ~~~-------~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 234 IPK-------HINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CCT-------TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred Ccc-------ccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 111 12345789999999999999999999986
No 181
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.1e-38 Score=334.73 Aligned_cols=263 Identities=20% Similarity=0.260 Sum_probs=207.3
Q ss_pred CCCChHHHHHHHhccCcC-ceecccCCceEEEEEec-CCceEEEEEeehhhH--HHHHHHHHHHHHHHhC-CCCccceEE
Q 046240 463 RRLPYQDLSRATNRFGRD-NLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA--RAMKSFEVECEVMKNI-RHRNLVKII 537 (763)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~ 537 (763)
..+.++......++|.+. +.||+|+||.||+|... +++.||+|++..... .....+.+|+.+++.+ .||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 344556666777888887 88999999999999665 689999999875432 2356788999999999 469999999
Q ss_pred eeeecCCceEEEEEccCCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC---CCc
Q 046240 538 SGCSNDDFKALVLEYMPNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE---DMI 613 (763)
Q Consensus 538 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~---~~~ 613 (763)
+++...+..++||||+++|+|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||+++. ++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~L---H~~givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL---HQNNIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESCBTTBCC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999998653 34689999999999999999999 7789999999999999988 789
Q ss_pred EEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcc
Q 046240 614 AHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNG 693 (763)
Q Consensus 614 ~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~ 693 (763)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 173 ~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------- 242 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY------- 242 (327)
T ss_dssp EEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------
T ss_pred EEEeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH-------
Confidence 9999999998764322 223457899999999999999999999999999999999999999764332211
Q ss_pred cCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 694 LLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 694 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+.. .....+... ...+...+.+++..|++.+|++|||++++++
T Consensus 243 ------~~i~~-~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 243 ------LNISQ-VNVDYSEET---FSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp ------HHHHH-TCCCCCTTT---TTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------HHHHh-cccccCchh---hcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 01111 111111110 1123456889999999999999999999975
No 182
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-38 Score=341.25 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=198.0
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 550 (763)
..++|.+.+.||+|+||.||+|... +|+.||+|++..... ...+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4678999999999999999999765 689999999975532 234688888887 7999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC----CcEEEeeecCceecC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED----MIAHLSDFGIAKLLS 626 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~~~~ 626 (763)
||+++|+|.+++.... .+++.....++.|+++||+|| |+.+|+||||||+||++.++ +.+||+|||+++.+.
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~l---H~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYL---HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999987654 589999999999999999999 77899999999999998433 359999999998765
Q ss_pred CCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
.... ......||+.|+|||++.+..++.++|||||||++|||++|..||....... ...+...+...
T Consensus 172 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----------~~~~~~~i~~~ 238 (342)
T 2qr7_A 172 AENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-----------PEEILARIGSG 238 (342)
T ss_dssp CTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-----------HHHHHHHHHHC
T ss_pred CCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-----------HHHHHHHHccC
Confidence 3322 2234578999999999988889999999999999999999999997521110 00111111111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
-...+.. ........+.+++.+|++.||++||++.++++
T Consensus 239 ~~~~~~~---~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 239 KFSLSGG---YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCCCCST---TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CcccCcc---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1100100 00112456889999999999999999999875
No 183
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.1e-38 Score=334.33 Aligned_cols=269 Identities=25% Similarity=0.318 Sum_probs=201.9
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 468999999999999999999765 58999999986442 234566789999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++++|..+..... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFC---HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHH---HHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999999988865543 589999999999999999999 778999999999999999999999999999987643222
Q ss_pred ccccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhh-hhcccCChhHHHHHHhhcC
Q 046240 631 SMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKH-WVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~ 708 (763)
......|++.|+|||++.+. .++.++|||||||++|||++|+.||............ ...+...+.......+.-.
T Consensus 180 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 180 --VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred --ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 22345689999999998765 7899999999999999999999999764332221111 1111122222222221110
Q ss_pred -C---Cc-----cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 709 -S---PP-----EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 709 -~---~~-----~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. .+ .........+...+.+++.+|++.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00 0000111123567899999999999999999999875
No 184
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-37 Score=341.04 Aligned_cols=250 Identities=20% Similarity=0.257 Sum_probs=189.6
Q ss_pred hccCcC-ceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHh-CCCCccceEEeeeec----CCceE
Q 046240 475 NRFGRD-NLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKN-IRHRNLVKIISGCSN----DDFKA 547 (763)
Q Consensus 475 ~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~----~~~~~ 547 (763)
++|.+. +.||+|+||+||+|... +|+.||||++... ..+.+|++++.+ .+||||+++++++.. ....|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999664 6899999998643 345678888754 589999999998865 56789
Q ss_pred EEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC---CCcEEEeeecCce
Q 046240 548 LVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE---DMIAHLSDFGIAK 623 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~ 623 (763)
+||||+++|+|.+++.... ..+++..+..++.|++.||.|| |+.+|+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999997653 3689999999999999999999 6789999999999999997 7899999999998
Q ss_pred ecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHH
Q 046240 624 LLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVV 703 (763)
Q Consensus 624 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 703 (763)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----------~~~~~~~i 279 (400)
T 1nxk_A 213 ETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----------SPGMKTRI 279 (400)
T ss_dssp ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS----------CCSHHHHH
T ss_pred ccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc----------cHHHHHHH
Confidence 764222 22346789999999999999999999999999999999999999976322110 01111111
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...-...+.... ..+..++.+++..||+.||++|||+.++++
T Consensus 280 ~~~~~~~~~~~~---~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 280 RMGQYEFPNPEW---SEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp HHTCCCCCTTTT---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HcCcccCCCccc---ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111111100 123456889999999999999999999986
No 185
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=8.3e-38 Score=337.79 Aligned_cols=263 Identities=23% Similarity=0.283 Sum_probs=186.7
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecC------C
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSND------D 544 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 544 (763)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999965 57899999998643 234456788999999999999999999998654 5
Q ss_pred ceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 545 FKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 545 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
..++|+||+ +++|.+++... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~L---H~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 68999888753 589999999999999999999 778999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhhh--------hcc
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKHW--------VNG 693 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~--------~~~ 693 (763)
.... .....||++|+|||++.+ ..++.++|||||||++|||++|+.||......... .... ...
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 5321 234578999999999876 68899999999999999999999999764322111 1111 111
Q ss_pred cCChhHHHHHHhhcCCCccccHH-HHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 694 LLPVSLMEVVNKTLLSPPEKDFA-AKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 694 ~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.........+.. +...+..... ........+.+++.+|+..||++|||+.++++
T Consensus 257 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 257 ISSESARNYIQS-LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CCCHHHHHHHHT-SCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhHHHHHHHhc-cCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 111222333332 2222222211 11122456889999999999999999999986
No 186
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.6e-37 Score=332.10 Aligned_cols=248 Identities=21% Similarity=0.281 Sum_probs=204.9
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 468999999999999999999765 57899999987542 34456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||+++++|.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYL---HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999886543 589999999999999999999 67899999999999999999999999999998764322
Q ss_pred CccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 630 QSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... .
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------------~~~~~~~~~-~ 259 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-------------YLRIKKNEY-S 259 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------HHHHHHTCC-C
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH-------------HHHHhcCCC-C
Confidence 2 22345689999999999998999999999999999999999999976332211 011111111 1
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. .+...+.+++.+||+.||++||++.++++
T Consensus 260 ~~~-------~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 260 IPK-------HINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CCT-------TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCc-------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 12345789999999999999999999986
No 187
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.7e-38 Score=340.22 Aligned_cols=275 Identities=20% Similarity=0.242 Sum_probs=203.7
Q ss_pred hHHHHHHHhccCcCceecccCCceEEEEEecCCceEEEEEeehhh-----------HHHHHHHHHHHHHHHhCCCCccce
Q 046240 467 YQDLSRATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQEC-----------ARAMKSFEVECEVMKNIRHRNLVK 535 (763)
Q Consensus 467 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~e~~~l~~l~h~niv~ 535 (763)
..++....++|.+.+.||+|+||.||+|...+|+.||||++.... ....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 456777889999999999999999999988889999999885321 123477899999999999999999
Q ss_pred EEeeeec-----CCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC
Q 046240 536 IISGCSN-----DDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE 610 (763)
Q Consensus 536 l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~ 610 (763)
+++++.. ....++||||++ |+|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVL---HEAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCcCEecCCChHHEEEcC
Confidence 9999843 346799999998 588888877666799999999999999999999 6789999999999999999
Q ss_pred CCcEEEeeecCceecCCCCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh--hh
Q 046240 611 DMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL--SL 687 (763)
Q Consensus 611 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~--~~ 687 (763)
++.+||+|||+++...... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp TCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9999999999997643222 2334578999999998876 7789999999999999999999999976432211 11
Q ss_pred hhhhccc--------CChhHHHHHHhhcCCCccccHH-HHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 688 KHWVNGL--------LPVSLMEVVNKTLLSPPEKDFA-AKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 688 ~~~~~~~--------~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
....... ......+.+.......+..... ........+.+++..|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1111110 0111222222222222222111 11223456899999999999999999999986
No 188
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-38 Score=337.23 Aligned_cols=272 Identities=22% Similarity=0.296 Sum_probs=198.3
Q ss_pred HHHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHH-----HHHHHHHHHHHHHhCCCCccceEEeeeecCCc
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECAR-----AMKSFEVECEVMKNIRHRNLVKIISGCSNDDF 545 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 545 (763)
...++|...+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999775 6899999998743221 23467889999999999999999999999999
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.++||||+++ +|..++......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL---HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 88888877666788889999999999999999 7789999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhh--hcccCChhHHH-
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHW--VNGLLPVSLME- 701 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~--~~~~~~~~~~~- 701 (763)
..... ......+|+.|+|||++.+ ..++.++|||||||++|||++|..||............+ ........+.+
T Consensus 163 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 163 GSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred cCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 43222 2344578999999999865 458999999999999999999999987643322111100 00000000000
Q ss_pred --HHHhh-cCCCccccH-HHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHH
Q 046240 702 --VVNKT-LLSPPEKDF-AAKEQCVLSIFSLAMECTMELPEKRINAKCCNFV 749 (763)
Q Consensus 702 --~i~~~-l~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~ 749 (763)
..+.. ....+.... .........+.+++..|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000 000000000 0001234578999999999999999999999863
No 189
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-37 Score=350.55 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=201.5
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH--HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA--RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
..++|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++......++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999765 789999999975432 2356788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEec---CCCcEEEeeecCceecC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLD---EDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~---~~~~~kl~Dfgla~~~~ 626 (763)
|||+++|+|.+.+.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++ .++.+||+|||+++.+.
T Consensus 100 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999988886543 589999999999999999999 778999999999999995 45679999999998764
Q ss_pred CCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
... ......||+.|+|||++.+ .++.++||||+||++|||++|..||........ .. .+....
T Consensus 176 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~------------~i~~~~ 238 (486)
T 3mwu_A 176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LK------------RVETGK 238 (486)
T ss_dssp CC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH------------HHHHTC
T ss_pred CCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH------------HHHhCC
Confidence 322 2334579999999999865 589999999999999999999999976432211 11 111111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.... ..........+.+++.+|++.+|++|||+.++++
T Consensus 239 ~~~~----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 239 YAFD----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp CCSC----SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCC----CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1100 0011123456889999999999999999999986
No 190
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.5e-37 Score=347.37 Aligned_cols=246 Identities=23% Similarity=0.318 Sum_probs=200.8
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 67899999999999999999775 699999999976532 23467889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCC
Q 046240 551 EYMPNGSLDIFLYSS---TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 551 e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 627 (763)
||++||+|..++... ...+++.....++.||+.||.|| |+.+|+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~L---H~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL---HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHH---HHcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999998654 23689999999999999999999 778999999999999999999999999999988653
Q ss_pred CCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHH-HHHHhh
Q 046240 628 EDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLM-EVVNKT 706 (763)
Q Consensus 628 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~ 706 (763)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+. .+....
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~----------~~~~~~~i~~~~ 409 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----------NKELKQRVLEQA 409 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC----------HHHHHHHHHHCC
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh----------HHHHHHHHhhcc
Confidence 322 22345799999999999999999999999999999999999999976321100 00111 111111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCH
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINA 743 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~ 743 (763)
.. .+. .....+.+++..|++.+|++||++
T Consensus 410 ~~-~p~-------~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 410 VT-YPD-------KFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CC-CCT-------TSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred cC-CCc-------ccCHHHHHHHHHhccCCHhHCCCC
Confidence 11 111 124567899999999999999975
No 191
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=332.11 Aligned_cols=251 Identities=27% Similarity=0.333 Sum_probs=200.6
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
..++|.+.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4578999999999999999999765 68999999997542 34678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++++|.+++......+++..+..++.+++.||.|| |+.+++||||||+||+++.++.+||+|||.+..+.....
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL---HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA- 180 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-
Confidence 9999999999975555789999999999999999999 778999999999999999999999999999987643221
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCc
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPP 711 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 711 (763)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||.......... .+.... .+
T Consensus 181 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--------------~~~~~~--~~ 243 (314)
T 3com_A 181 -KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF--------------MIPTNP--PP 243 (314)
T ss_dssp -CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--------------HHHHSC--CC
T ss_pred -ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH--------------HHhcCC--Cc
Confidence 2334568999999999999999999999999999999999999997643221100 000000 00
Q ss_pred cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 712 EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 712 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.. .....+...+.+++..|++.||++||++.++++
T Consensus 244 ~~--~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 244 TF--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp CC--SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00 001123456889999999999999999999975
No 192
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.7e-38 Score=340.72 Aligned_cols=265 Identities=26% Similarity=0.341 Sum_probs=205.3
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 368999999999999999999765 7899999998754 23445778999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTT-PIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
|+++++|.+++.... .+++.....++.++++||.|| |+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~l---h~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYL---REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999997654 588999999999999999999 443 8999999999999999999999999998765311
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhh--h-----------------
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHW--V----------------- 691 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~--~----------------- 691 (763)
......||+.|+|||++.+..++.++|||||||++|||++|+.||............. .
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 2234578999999999999999999999999999999999999997643322211100 0
Q ss_pred ------cccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 692 ------NGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 692 ------~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
....+....+.++......+.... ...+...+.+++..|++.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000011122222222211111100 0112456899999999999999999999985
No 193
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.7e-38 Score=334.55 Aligned_cols=252 Identities=25% Similarity=0.342 Sum_probs=199.0
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
.++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 468999999999999999999775 6899999999766555567888999999999999999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCcc
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSM 632 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 632 (763)
+++++|.+++......+++..+..++.|+++||.|| |+.+++||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL---HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQ 172 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HH
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cc
Confidence 999999999876555789999999999999999999 6789999999999999999999999999987543211 11
Q ss_pred ccccccccccccCcccc-----CCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhc
Q 046240 633 TQTQTLATIGYMAPEYG-----IERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTL 707 (763)
Q Consensus 633 ~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 707 (763)
......|+..|+|||++ .+..++.++||||||+++|||++|+.||........ ... +...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~------------~~~~-- 237 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLK------------IAKS-- 237 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHH------------HHHS--
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHH------------Hhcc--
Confidence 12335689999999987 467789999999999999999999999976432211 111 1110
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 708 LSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 708 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+.. .....+...+.+++..|++.+|++|||+.++++
T Consensus 238 -~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 238 -DPPTL--LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -CCCCC--SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -CCccc--CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000 001123456889999999999999999999975
No 194
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.6e-38 Score=330.61 Aligned_cols=252 Identities=29% Similarity=0.405 Sum_probs=198.4
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecC-CceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSND-DFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e~ 552 (763)
.++|+..+.||+|+||.||+|... |+.||+|+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 468999999999999999999875 8899999987543 356788999999999999999999997554 478999999
Q ss_pred cCCCChhhhhccCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 553 MPNGSLDIFLYSSTC-MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
+++++|.+++..... .+++..+..++.|+++||+|| |+.+++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH---HhCCccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 999999999976432 378889999999999999999 7789999999999999999999999999998865322
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCC
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSP 710 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 710 (763)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ....+.......
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--------------~~~~~~~~~~~~ 234 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------VVPRVEKGYKMD 234 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--------------HHHHHTTTCCCC
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHhcCCCCC
Confidence 122357889999999988899999999999999999998 999987632211 111111111000
Q ss_pred ccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 711 PEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 711 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
.. ..+...+.+++..||+.+|++||++.++++.|+++...
T Consensus 235 ~~------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 235 AP------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CC------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Cc------ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 00 12345688999999999999999999999999887544
No 195
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.5e-37 Score=325.85 Aligned_cols=248 Identities=27% Similarity=0.333 Sum_probs=204.8
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 46789999999999999999965 478999999997543 2345778999999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCc
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 631 (763)
|+++++|.+++... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 99999999998753 589999999999999999999 778999999999999999999999999999987653321
Q ss_pred cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCc
Q 046240 632 MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPP 711 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 711 (763)
......|++.|+|||++.+..++.++||||||+++|||++|+.||........ ...+.+......
T Consensus 175 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------------~~~~~~~~~~~~ 239 (303)
T 3a7i_A 175 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--------------LFLIPKNNPPTL 239 (303)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------------HHHHHHSCCCCC
T ss_pred -ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--------------HHHhhcCCCCCC
Confidence 23445789999999999999999999999999999999999999876432211 011111110000
Q ss_pred cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 712 EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 712 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.. .+...+.+++..||+.+|++||++.++++
T Consensus 240 ~~------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 240 EG------NYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp CS------SCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cc------ccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 01 12456889999999999999999999986
No 196
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-37 Score=335.07 Aligned_cols=271 Identities=22% Similarity=0.304 Sum_probs=201.3
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeec--------
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSN-------- 542 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 542 (763)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36899999999999999999976 578999999986442 2234567889999999999999999999876
Q ss_pred CCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCc
Q 046240 543 DDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIA 622 (763)
Q Consensus 543 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 622 (763)
.+..++||||+++ ++...+......+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999986 67777766555789999999999999999999 7789999999999999999999999999999
Q ss_pred eecCCCCC--ccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhhhhcccCCh
Q 046240 623 KLLSGEDQ--SMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKHWVNGLLPV 697 (763)
Q Consensus 623 ~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~~~~~~~~ 697 (763)
+.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .........+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 87753222 122345678999999998875 56899999999999999999999999864332211 11111111111
Q ss_pred hHHH-----HHHhhcCCCccc-cHHH---HHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 698 SLME-----VVNKTLLSPPEK-DFAA---KEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 698 ~~~~-----~i~~~l~~~~~~-~~~~---~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.... .....-...... .... .......+.+++.+|++.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000 000000000000 0000 0011345889999999999999999999986
No 197
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2e-37 Score=323.79 Aligned_cols=244 Identities=20% Similarity=0.259 Sum_probs=197.7
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehh--hHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQE--CARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 548 (763)
..++|.+.+.||+|+||+||+|... +++.||+|++... .......+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4678999999999999999999775 7899999998753 223456778899999999 99999999999999999999
Q ss_pred EEEccCCCChhhhhccCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC--------------
Q 046240 549 VLEYMPNGSLDIFLYSST---CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED-------------- 611 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~-------------- 611 (763)
||||+++++|.+++.... ..+++..+..++.|+++||+|| |+++|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI---HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997532 3589999999999999999999 77899999999999999844
Q ss_pred -----CcEEEeeecCceecCCCCCccccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh
Q 046240 612 -----MIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL 685 (763)
Q Consensus 612 -----~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 685 (763)
..+||+|||.+...... ....||+.|+|||.+.+. .++.++|||||||++|||++|.+|+.....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--- 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--- 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---
T ss_pred ccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---
Confidence 47999999999876432 223589999999998765 667899999999999999999987654211
Q ss_pred hhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 686 SLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 686 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. ..+........+. .+...+.+++..|++.||++||++.++++
T Consensus 237 -~------------~~~~~~~~~~~~~-------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 -W------------HEIRQGRLPRIPQ-------VLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -H------------HHHHTTCCCCCSS-------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -H------------HHHHcCCCCCCCc-------ccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 1111111111111 12456889999999999999999999976
No 198
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1e-37 Score=347.31 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=210.0
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCC-CccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRH-RNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... ...+.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999975 5789999998865432 2457789999999976 566666677778888999999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe---cCCCcEEEeeecCceecCCC
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL---DEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~ 628 (763)
|+ +++|.+++......+++..+..|+.||+.||+|| |+++|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV---HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 9999999986666799999999999999999999 77899999999999999 68899999999999987543
Q ss_pred CCc-----cccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHH
Q 046240 629 DQS-----MTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVV 703 (763)
Q Consensus 629 ~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 703 (763)
... .......||..|+|||++.+..++.++|||||||++|||++|+.||......... .....+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~----------~~~~~i~ 229 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK----------QKYEKIS 229 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH----------HHHHHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH----------HHHHHHh
Confidence 321 1223567999999999999999999999999999999999999999763221100 0111111
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
........ ......+..++.+++..||+.+|++||++.+|++.|++++.+.
T Consensus 230 ~~~~~~~~---~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 230 EKKVATSI---EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHHHHSCH---HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hccccccH---HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 11111110 0111223567899999999999999999999999999887764
No 199
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=336.88 Aligned_cols=257 Identities=26% Similarity=0.296 Sum_probs=189.2
Q ss_pred HHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CCccceEEeeee--------c
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIR-HRNLVKIISGCS--------N 542 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~ 542 (763)
...+|.+.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+.+++++. ||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 356899999999999999999976 478999999987665566678899999999996 999999999983 3
Q ss_pred CCceEEEEEccCCCChhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEecCCCcEEEee
Q 046240 543 DDFKALVLEYMPNGSLDIFLYS--STCMLDIFQRLNIMIDVASALEYLNFRHTTP--IIHCDLKSSNVLLDEDMIAHLSD 618 (763)
Q Consensus 543 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~dlk~~NIll~~~~~~kl~D 618 (763)
....++||||++ |+|.+++.. ....+++..+..++.|+++||.|| |+.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM---HRQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH---HTSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCEEEccCCcccEEECCCCCEEEec
Confidence 345789999996 688888754 334689999999999999999999 6677 99999999999999999999999
Q ss_pred ecCceecCCCCCcc----------ccccccccccccCcccc---CCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh
Q 046240 619 FGIAKLLSGEDQSM----------TQTQTLATIGYMAPEYG---IERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL 685 (763)
Q Consensus 619 fgla~~~~~~~~~~----------~~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 685 (763)
||+++......... ......+|+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~- 260 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR- 260 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-
Confidence 99998765322211 11234589999999988 56778999999999999999999999997532211
Q ss_pred hhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 686 SLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 686 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
++.......+... ....+.+++..||+.+|++||++.|+++.|+++...
T Consensus 261 ----------------~~~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 261 ----------------IVNGKYSIPPHDT------QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp ---------------------CCCCTTCC------SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------------hhcCcccCCcccc------cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1111111111111 123478999999999999999999999999877654
No 200
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.2e-37 Score=349.66 Aligned_cols=251 Identities=22% Similarity=0.287 Sum_probs=200.6
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH-------------HHHHHHHHHHHHHHhCCCCccceEEe
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA-------------RAMKSFEVECEVMKNIRHRNLVKIIS 538 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~ 538 (763)
..++|.+.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999765 688999999875421 22467889999999999999999999
Q ss_pred eeecCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC---cEE
Q 046240 539 GCSNDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM---IAH 615 (763)
Q Consensus 539 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~---~~k 615 (763)
++......++||||+++|+|.+++.... .+++..+..++.|++.||.|| |+.+|+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYL---HKHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999998886643 589999999999999999999 778999999999999998775 699
Q ss_pred EeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccC
Q 046240 616 LSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLL 695 (763)
Q Consensus 616 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 695 (763)
|+|||+++.+.... ......||+.|+|||++. +.++.++||||+||++|||++|..||........
T Consensus 190 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---------- 255 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI---------- 255 (504)
T ss_dssp ECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------
T ss_pred EEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH----------
Confidence 99999998875332 233457999999999876 4689999999999999999999999976432211
Q ss_pred ChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 696 PVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 696 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.....................+.+++..|++.||++|||++|+++
T Consensus 256 -------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 256 -------IKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp -------HHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------HHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111111111111111223556899999999999999999999985
No 201
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.7e-37 Score=319.79 Aligned_cols=246 Identities=25% Similarity=0.382 Sum_probs=195.1
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
++|.+.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 67999999999999999999775 789999999976532 23457889999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||+++++|.+++.... .+++.....++.|+++||.|| |+.+++||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 165 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYC---HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 165 (276)
T ss_dssp ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred eccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc-
Confidence 9999999999987643 588999999999999999999 67899999999999999999999999999998764322
Q ss_pred ccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
......+++.|+|||.+.+..+ +.++||||||+++|||++|+.||....... ..+.+......
T Consensus 166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------------~~~~~~~~~~~ 229 (276)
T 2h6d_A 166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--------------LFKKIRGGVFY 229 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------------HHHHHHHCCCC
T ss_pred --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--------------HHHHhhcCccc
Confidence 2234568999999999887765 689999999999999999999997632211 11111111111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+. .+...+.+++.+|++.||++||++.++++
T Consensus 230 ~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 230 IPE-------YLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp CCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cch-------hcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 111 12345889999999999999999999987
No 202
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.5e-37 Score=350.17 Aligned_cols=251 Identities=23% Similarity=0.312 Sum_probs=198.0
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
..++|.+.+.||+|+||+||+|... ++..||+|++.... ......+.+|+.+++.++||||+++++++......++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999999999765 78899999997543 22356788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC---CCcEEEeeecCceecC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE---DMIAHLSDFGIAKLLS 626 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~~~~ 626 (763)
|||+++|+|.+.+.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++. ++.+||+|||+++.+.
T Consensus 115 ~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYL---HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred EecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 99999999988886543 588999999999999999999 7789999999999999976 4559999999998875
Q ss_pred CCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
... ......||+.|+|||++. ..++.++||||+||++|||++|..||........ . ..+....
T Consensus 191 ~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~------------~~i~~~~ 253 (494)
T 3lij_A 191 NQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-L------------RKVEKGK 253 (494)
T ss_dssp TTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H------------HHHHHTC
T ss_pred CCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH-H------------HHHHhCC
Confidence 332 234467999999999876 5699999999999999999999999976432211 1 1111111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
... +... .......+.+++..|++.+|++|||+.++++
T Consensus 254 ~~~-~~~~---~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 254 YTF-DSPE---WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CCC-CSGG---GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCC-Cchh---cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 111 1100 0112456889999999999999999999984
No 203
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=323.11 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=197.6
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH----HHHHHHHHHHHHHHhCCCCccceEEeeee--cCCc
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA----RAMKSFEVECEVMKNIRHRNLVKIISGCS--NDDF 545 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 545 (763)
..++|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3478999999999999999999764 688999999976532 24567899999999999999999999984 4568
Q ss_pred eEEEEEccCCCChhhhhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 546 KALVLEYMPNGSLDIFLYS-STCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
.++||||++++ +.+++.. ....+++..+..++.|+++||.|| |+++|+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL---HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999987 5555543 344689999999999999999999 778999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccCCCC--CCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIERK--VSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
..............|+..|+|||++.+.. ++.++||||||+++|||++|+.||....... ..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------------~~~~ 224 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--------------LFEN 224 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------------HHHH
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--------------HHHH
Confidence 65433333334567899999999987643 4789999999999999999999997632211 1111
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.+.....+. .+...+.+++.+|++.||++||+++++++
T Consensus 225 i~~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 225 IGKGSYAIPG-------DCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp HHHCCCCCCS-------SSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HhcCCCCCCC-------ccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111111 12456889999999999999999999996
No 204
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.8e-37 Score=323.20 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=196.7
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeec----CCceE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSN----DDFKA 547 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 547 (763)
+.|.+.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 4577888999999999999966 468899999987542 3456778999999999999999999998864 45689
Q ss_pred EEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeCCCCCCCEEec-CCCcEEEeeecCcee
Q 046240 548 LVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTP--IIHCDLKSSNVLLD-EDMIAHLSDFGIAKL 624 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~--ivH~dlk~~NIll~-~~~~~kl~Dfgla~~ 624 (763)
+||||+++++|.+++.... .+++..+..++.|+++||.|| |+.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFL---HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHH---HcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999997643 588999999999999999999 6666 99999999999997 789999999999976
Q ss_pred cCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHH
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVN 704 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 704 (763)
.... ......|++.|+|||++. +.++.++|||||||++|||++|+.||..................+
T Consensus 182 ~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------- 248 (290)
T 1t4h_A 182 KRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP-------- 248 (290)
T ss_dssp CCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--------
T ss_pred cccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc--------
Confidence 4322 223456899999999876 458999999999999999999999997633222111111111000
Q ss_pred hhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 705 KTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 705 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. .........+.+++..||+.+|++|||+.++++
T Consensus 249 -------~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 -------A---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -------G---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------c---ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 001112346889999999999999999999986
No 205
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=327.15 Aligned_cols=250 Identities=26% Similarity=0.385 Sum_probs=196.8
Q ss_pred ccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEccC
Q 046240 476 RFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYMP 554 (763)
Q Consensus 476 ~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 554 (763)
+|.....||+|+||.||+|.. .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 344556899999999999975 5788999999976655556778999999999999999999999999999999999999
Q ss_pred CCChhhhhccCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC-CCcEEEeeecCceecCCCCCc
Q 046240 555 NGSLDIFLYSSTC--MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE-DMIAHLSDFGIAKLLSGEDQS 631 (763)
Q Consensus 555 ~g~L~~~l~~~~~--~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~-~~~~kl~Dfgla~~~~~~~~~ 631 (763)
+++|.+++..... ..++..+..++.|+++||.|| |+.+|+||||||+||+++. ++.+||+|||.++.......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL---HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH---HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 9999999976532 456888899999999999999 6789999999999999987 89999999999987643221
Q ss_pred cccccccccccccCccccCCCC--CCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 632 MTQTQTLATIGYMAPEYGIERK--VSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 632 ~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
......|++.|+|||++.+.. ++.++||||||+++|||++|+.||............ . .....
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~------------~--~~~~~ 243 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK------------V--GMFKV 243 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH------------H--HHHCC
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh------------h--ccccc
Confidence 223456899999999987543 789999999999999999999999753222111000 0 00111
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+... ..+...+.+++..||+.||++||++.++++
T Consensus 244 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 HPEIP----ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCCC----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccc----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11110 112456889999999999999999999985
No 206
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7e-38 Score=352.25 Aligned_cols=251 Identities=24% Similarity=0.323 Sum_probs=203.5
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
..++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4578999999999999999999765 78999999986542 2345678899999999999999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe---cCCCcEEEeeecCceec
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL---DEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~ 625 (763)
||||+.+|+|.+++.... .+++..+..++.|+++||.|| |+++|+||||||+||++ +.++.+||+|||+++.+
T Consensus 104 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYM---HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999887654 588999999999999999999 77899999999999999 56789999999999876
Q ss_pred CCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
.... ......||+.|+|||++.+ .++.++||||+||++|||++|..||........ .. .+...
T Consensus 180 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~------------~i~~~ 242 (484)
T 3nyv_A 180 EASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI-LK------------KVEKG 242 (484)
T ss_dssp CCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH------------HHHHC
T ss_pred cccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH-HH------------HHHcC
Confidence 5332 2234569999999998865 689999999999999999999999976432211 11 11111
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.... +. .........+.+++.+|++.+|++|||+.++++
T Consensus 243 ~~~~-~~---~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 243 KYTF-EL---PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCCC-CS---GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCC-CC---cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 1110 00 011123456889999999999999999999985
No 207
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.2e-37 Score=359.31 Aligned_cols=251 Identities=25% Similarity=0.382 Sum_probs=199.6
Q ss_pred ceecccCCceEEEEEec---CCceEEEEEeehhhH--HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEEccCC
Q 046240 481 NLIGIGSFGYVYKAELD---DGIEVAIKVFHQECA--RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLEYMPN 555 (763)
Q Consensus 481 ~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 555 (763)
+.||+|+||+||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999976532 345789999999999999999999999965 458899999999
Q ss_pred CChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC-cccc
Q 046240 556 GSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ-SMTQ 634 (763)
Q Consensus 556 g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~ 634 (763)
|+|.+++.... .+++..+..++.||++||+|| |+++|+||||||+|||++.++.+||+|||+++.+..... ....
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yL---H~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHH---HHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997643 589999999999999999999 678999999999999999999999999999987653332 1222
Q ss_pred ccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccc
Q 046240 635 TQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEK 713 (763)
Q Consensus 635 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 713 (763)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ..+.+.+......
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--------------~~~~i~~~~~~~~-- 593 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--------------VTAMLEKGERMGC-- 593 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--------------HHHHHHTTCCCCC--
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------------HHHHHHcCCCCCC--
Confidence 33456789999999999999999999999999999999 999997643322 1112221111100
Q ss_pred cHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhcccc
Q 046240 714 DFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVS 756 (763)
Q Consensus 714 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~ 756 (763)
...+..++.+++..||+.||++||++.+|++.|++.+.+
T Consensus 594 ----p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 594 ----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 112456789999999999999999999999999987654
No 208
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.1e-37 Score=332.34 Aligned_cols=269 Identities=23% Similarity=0.261 Sum_probs=192.9
Q ss_pred HHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
..++|.+.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 357899999999999999999965 478999999996443 22345677899999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe-----cCCCcEEEeeecCcee
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL-----DEDMIAHLSDFGIAKL 624 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll-----~~~~~~kl~Dfgla~~ 624 (763)
|||+++ +|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 112 ~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFC---HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999985 8988887654 588999999999999999999 77899999999999999 4555699999999987
Q ss_pred cCCCCCccccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhc-ccCCh-hHHH
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVN-GLLPV-SLME 701 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~-~~~~~-~~~~ 701 (763)
+..... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||............... +..+. ....
T Consensus 187 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 187 FGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp HC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred cCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence 642221 23345689999999998764 5899999999999999999999999764332211111000 00000 0000
Q ss_pred HHH-----hhcCCCccc--cHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 702 VVN-----KTLLSPPEK--DFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 702 ~i~-----~~l~~~~~~--~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
... ......... ..........++.+++.+|++.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 000000000 00011113456889999999999999999999976
No 209
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3e-37 Score=324.32 Aligned_cols=251 Identities=21% Similarity=0.286 Sum_probs=202.9
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---------HHHHHHHHHHHHHHHhCC-CCccceEEeeeec
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---------ARAMKSFEVECEVMKNIR-HRNLVKIISGCSN 542 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 542 (763)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 478999999999999999999765 68999999986432 233567789999999995 9999999999999
Q ss_pred CCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCc
Q 046240 543 DDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIA 622 (763)
Q Consensus 543 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 622 (763)
.+..++||||+++++|.+++.... .+++..+..++.|+++||.|| |+.+++||||||+||+++.++.+||+|||.+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEcCCCcEEEecccch
Confidence 999999999999999999997643 588999999999999999999 7789999999999999999999999999999
Q ss_pred eecCCCCCccccccccccccccCccccC------CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCC
Q 046240 623 KLLSGEDQSMTQTQTLATIGYMAPEYGI------ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLP 696 (763)
Q Consensus 623 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 696 (763)
..+.... ......+++.|+|||++. ...++.++||||||+++|||++|..||........
T Consensus 172 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----------- 237 (298)
T 1phk_A 172 CQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM----------- 237 (298)
T ss_dssp EECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----------
T ss_pred hhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH-----------
Confidence 8765332 223456899999999874 45788999999999999999999999976332111
Q ss_pred hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 697 VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 697 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...+....... +... ...+...+.+++..|++.||++||++.++++
T Consensus 238 --~~~~~~~~~~~-~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 --LRMIMSGNYQF-GSPE---WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp --HHHHHHTCCCC-CTTT---GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --HHHHhcCCccc-Cccc---ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 01111111111 1110 1123556899999999999999999999985
No 210
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.8e-38 Score=325.07 Aligned_cols=253 Identities=22% Similarity=0.267 Sum_probs=200.6
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeee--cCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCS--NDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 548 (763)
.++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999765 7899999999754 2345677899999999999999999999874 4568899
Q ss_pred EEEccCCCChhhhhccC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeCCCCCCCEEecCCCcEEEeeec
Q 046240 549 VLEYMPNGSLDIFLYSS---TCMLDIFQRLNIMIDVASALEYLNFRHTTP-----IIHCDLKSSNVLLDEDMIAHLSDFG 620 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~-----ivH~dlk~~NIll~~~~~~kl~Dfg 620 (763)
||||+++++|.+++... ...+++..+..++.|+++||+|| |+.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC---HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHH---hcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998753 23589999999999999999999 4555 9999999999999999999999999
Q ss_pred CceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHH
Q 046240 621 IAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLM 700 (763)
Q Consensus 621 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 700 (763)
.++....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||........ . .
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~------------~ 226 (279)
T 2w5a_A 162 LARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL-A------------G 226 (279)
T ss_dssp HHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-H------------H
T ss_pred hheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH-H------------H
Confidence 9987643221 12335689999999999988999999999999999999999999976432211 0 1
Q ss_pred HHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHh
Q 046240 701 EVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLC 751 (763)
Q Consensus 701 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~ 751 (763)
.+........+. .+...+.+++.+||+.+|++||++.++++.+.
T Consensus 227 ~i~~~~~~~~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 227 KIREGKFRRIPY-------RYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHTCCCCCCT-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHhhcccccCCc-------ccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 111111111111 12456889999999999999999999998543
No 211
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2e-37 Score=324.22 Aligned_cols=250 Identities=23% Similarity=0.252 Sum_probs=185.9
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.++|++.+.||+|+||+||+|.. .+|+.||+|++.... ....+.+..+...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46899999999999999999976 578999999997542 222333445555677789999999999999999999999
Q ss_pred EccCCCChhhhhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 551 EYMPNGSLDIFLYS---STCMLDIFQRLNIMIDVASALEYLNFRHTT-PIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 551 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
||+++ +|.+++.. ....+++..+..++.|+++||+|| |++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HHHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99985 77776643 345789999999999999999999 666 99999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCcccc----CCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYG----IERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||........... ..
T Consensus 162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~------------~~ 226 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK------------QV 226 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH------------HH
T ss_pred ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH------------HH
Confidence 322 22334689999999995 567789999999999999999999999975322221111 11
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.......+.. .+...+.+++..|++.+|++|||+.|+++
T Consensus 227 ~~~~~~~~~~~------~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 VEEPSPQLPAD------KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHSCCCCCCTT------TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hccCCCCcccc------cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 22111111111 12456889999999999999999999986
No 212
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.3e-37 Score=332.70 Aligned_cols=269 Identities=20% Similarity=0.203 Sum_probs=201.9
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecC-----Cce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSND-----DFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 546 (763)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999654 78899999997432 34457788999999999999999999998654 368
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
++||||+++ +|.+++... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYI---HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999999975 898888764 488999999999999999999 77899999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhhhhcccCC------
Q 046240 627 GEDQS-MTQTQTLATIGYMAPEYGI-ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKHWVNGLLP------ 696 (763)
Q Consensus 627 ~~~~~-~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~~~~~~~~------ 696 (763)
..... .......||+.|+|||++. +..++.++|||||||++|||++|+.||......... ..........
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 32221 1224457999999999865 455899999999999999999999999764322211 1111111110
Q ss_pred --hhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 697 --VSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 697 --~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
............................+.+++.+|++.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0111111111111110000011123456889999999999999999999986
No 213
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.6e-37 Score=332.45 Aligned_cols=264 Identities=22% Similarity=0.284 Sum_probs=204.8
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHH-----------------HHHHHHHHHHHHhCCCCccceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARA-----------------MKSFEVECEVMKNIRHRNLVKI 536 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~l 536 (763)
.++|.+.+.||+|+||.||+|.. +|+.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999988 89999999998654321 1788999999999999999999
Q ss_pred EeeeecCCceEEEEEccCCCChhhh------hccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEeCCCCCCCEEe
Q 046240 537 ISGCSNDDFKALVLEYMPNGSLDIF------LYSS-TCMLDIFQRLNIMIDVASALEYLNFRHT-TPIIHCDLKSSNVLL 608 (763)
Q Consensus 537 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~-~~ivH~dlk~~NIll 608 (763)
++++...+..++||||+++++|.++ +... ...+++..+..++.|+++||.|| |+ .+|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYI---HNEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHH---HHTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHH---hccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5542 44789999999999999999999 65 899999999999999
Q ss_pred cCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCC-CCCc-chhHHHHHHHHHHHHcCCCCCchhhhhhhh
Q 046240 609 DEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIER-KVST-RSDIYSYGIMLIETFTRKKPADKMFAAELS 686 (763)
Q Consensus 609 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~slGv~l~elltg~~p~~~~~~~~~~ 686 (763)
+.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++|||||||++|||++|+.||.........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999876432 23446789999999998877 6666 999999999999999999999764331111
Q ss_pred hhhhhcccC--ChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 687 LKHWVNGLL--PVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 687 ~~~~~~~~~--~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
......... +......... .. ..........+...+.+++..|++.||++||++.|+++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYP-LT--NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTT-TC--C--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHhccCcCCccchhhhhcc-cc--ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111 1000000000 00 00000011223567899999999999999999999986
No 214
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-38 Score=346.84 Aligned_cols=240 Identities=16% Similarity=0.155 Sum_probs=186.7
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh---hHHHHHHHHHHHH---HHHhCCCCccceEE-------ee
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE---CARAMKSFEVECE---VMKNIRHRNLVKII-------SG 539 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~---~l~~l~h~niv~l~-------~~ 539 (763)
.++|.+.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788999999999999999976 56899999998733 2334577889994 55555899999998 55
Q ss_pred eecCC-----------------ceEEEEEccCCCChhhhhccCCC------CCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 046240 540 CSNDD-----------------FKALVLEYMPNGSLDIFLYSSTC------MLDIFQRLNIMIDVASALEYLNFRHTTPI 596 (763)
Q Consensus 540 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~~ia~~L~~Lh~~h~~~i 596 (763)
+...+ ..++||||+ +|+|.+++...+. .+++..+..++.|+++||+|| |+.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHH---HHTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHH---HhCCe
Confidence 55443 378999999 6799999875322 233578888999999999999 77899
Q ss_pred EeCCCCCCCEEecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCC-----------CCCcchhHHHHHH
Q 046240 597 IHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIER-----------KVSTRSDIYSYGI 665 (763)
Q Consensus 597 vH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~slGv 665 (763)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986431 2234567 999999998877 8999999999999
Q ss_pred HHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHH
Q 046240 666 MLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKC 745 (763)
Q Consensus 666 ~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~ 745 (763)
++|||++|+.||........ ... .....+ .+...+.+++.+||+.||++||++.+
T Consensus 302 il~elltg~~Pf~~~~~~~~-~~~----------------~~~~~~--------~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG-SEW----------------IFRSCK--------NIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHSSCCC------CC-SGG----------------GGSSCC--------CCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHCCCCCcccccccc-hhh----------------hhhhcc--------CCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 99999999999976332111 000 000001 12346889999999999999999999
Q ss_pred HHH
Q 046240 746 CNF 748 (763)
Q Consensus 746 v~~ 748 (763)
+++
T Consensus 357 ~l~ 359 (377)
T 3byv_A 357 AME 359 (377)
T ss_dssp HHT
T ss_pred Hhh
Confidence 985
No 215
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-38 Score=337.26 Aligned_cols=253 Identities=25% Similarity=0.321 Sum_probs=199.2
Q ss_pred HhccCcCceecccCCceEEEEEe----cCCceEEEEEeehhh----HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCC
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL----DDGIEVAIKVFHQEC----ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDD 544 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 544 (763)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36899999999999999999976 368999999986432 12334567799999999 6999999999999999
Q ss_pred ceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 545 FKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 545 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
..++||||+++|+|.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999997644 588999999999999999999 678999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIE--RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...++
T Consensus 209 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-------------~~~~~ 274 (355)
T 1vzo_A 209 FVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-------------SQAEI 274 (355)
T ss_dssp CCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-------------CHHHH
T ss_pred cccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-------------hHHHH
Confidence 642221 22334579999999999875 457899999999999999999999997532111 11111
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCC-----CHHHHHH
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRI-----NAKCCNF 748 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----s~~~v~~ 748 (763)
........+... ..+...+.+++.+||..||++|| +++++++
T Consensus 275 ~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~ 321 (355)
T 1vzo_A 275 SRRILKSEPPYP----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321 (355)
T ss_dssp HHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred HHHHhccCCCCC----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence 111111111111 11245678999999999999999 8888875
No 216
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=326.21 Aligned_cols=268 Identities=20% Similarity=0.261 Sum_probs=195.9
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeee-----------
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCS----------- 541 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----------- 541 (763)
.++|...+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 368999999999999999999775 58999999997665566778899999999999999999999873
Q ss_pred ---cCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEec-CCCcEEEe
Q 046240 542 ---NDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLD-EDMIAHLS 617 (763)
Q Consensus 542 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~-~~~~~kl~ 617 (763)
+....++||||++ |+|.+++... .++......++.|+++||+|| |+.+|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYI---HSANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHH---HHTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999998 5999988653 488999999999999999999 778999999999999997 56799999
Q ss_pred eecCceecCCCCC-ccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcc--
Q 046240 618 DFGIAKLLSGEDQ-SMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNG-- 693 (763)
Q Consensus 618 Dfgla~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~-- 693 (763)
|||+++....... ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .......
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcC
Confidence 9999987643211 112234567999999998765 7789999999999999999999999976433221 1111111
Q ss_pred cCCh-hHHHHH-------HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 694 LLPV-SLMEVV-------NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 694 ~~~~-~~~~~i-------~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.... ...++. .................+...+.+++.+|++.||++||++.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0111 111111 111111111000111123567899999999999999999999986
No 217
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.7e-38 Score=331.24 Aligned_cols=261 Identities=27% Similarity=0.325 Sum_probs=185.0
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
.++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 578999999999999999999754 68899999986543 2345678889999999999999999999999999999999
Q ss_pred ccCCCChhhhhcc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 552 YMPNGSLDIFLYS-------STCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 552 ~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
|+++++|.+++.. ....+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||.+..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL---HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999864 234689999999999999999999 678999999999999999999999999999877
Q ss_pred cCCCCC---ccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHH
Q 046240 625 LSGEDQ---SMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLM 700 (763)
Q Consensus 625 ~~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 700 (763)
...... ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||............ .....+....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~ 249 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-LQNDPPSLET 249 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH-HTSSCCCTTC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH-hccCCCcccc
Confidence 643221 112234568999999998865 56899999999999999999999999764322211111 1111110000
Q ss_pred HHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 701 EVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 701 ~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
...+.... ..+...+.+++..||+.||++||++.++++
T Consensus 250 ~~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 250 GVQDKEML----------KKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----CCC----------CCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccchhh----------hhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00000000 012346889999999999999999999986
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5.3e-37 Score=332.73 Aligned_cols=264 Identities=22% Similarity=0.193 Sum_probs=193.4
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCC------
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD------ 544 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 544 (763)
.++|...+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367999999999999999999654 6899999999753 2344567889999999999999999999997654
Q ss_pred ceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 545 FKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 545 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
..++||||+++ +|.+++.. .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~l---H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHH---HHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 68999999975 67777753 478899999999999999999 778999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhccc----------
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGL---------- 694 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~---------- 694 (763)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ +.......
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTT
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHH
Confidence 54221 22345789999999999999999999999999999999999999976433221 11111110
Q ss_pred CChhHHHHHHhhcCCCc------------cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 695 LPVSLMEVVNKTLLSPP------------EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 695 ~~~~~~~~i~~~l~~~~------------~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
........+...-.... .............+.+++.+|+..||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 01111111111000000 0001112234667899999999999999999999986
No 219
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.6e-37 Score=328.65 Aligned_cols=252 Identities=23% Similarity=0.254 Sum_probs=196.7
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--------HHHHHHHHHHHHHHHhCCCCccceEEeeeecC
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--------ARAMKSFEVECEVMKNIRHRNLVKIISGCSND 543 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 543 (763)
..++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4578999999999999999999764 68899999986432 11234578999999999999999999999766
Q ss_pred CceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc---EEEeeec
Q 046240 544 DFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI---AHLSDFG 620 (763)
Q Consensus 544 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~---~kl~Dfg 620 (763)
+ .++||||+++++|.+++.... .+++.....++.|+++||.|| |+.+|+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYL---HENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 899999999999999887543 688999999999999999999 6789999999999999987654 9999999
Q ss_pred CceecCCCCCccccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCCh
Q 046240 621 IAKLLSGEDQSMTQTQTLATIGYMAPEYGI---ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPV 697 (763)
Q Consensus 621 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 697 (763)
+++...... ......||+.|+|||++. ...++.++|||||||++|||++|..||........
T Consensus 163 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------ 227 (322)
T 2ycf_A 163 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS------------ 227 (322)
T ss_dssp TCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC------------
T ss_pred cceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH------------
Confidence 998764221 223456899999999863 56789999999999999999999999976322111
Q ss_pred hHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 698 SLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 698 ~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+.+...... ............+.+++.+|++.||++||++.++++
T Consensus 228 -~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 228 -LKDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -HHHHHHHTCCC---CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHHHHhCccc---cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 11111111100 011111223567899999999999999999999984
No 220
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.9e-37 Score=330.99 Aligned_cols=268 Identities=24% Similarity=0.256 Sum_probs=201.7
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecC-----Cce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSND-----DFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 546 (763)
.++|.+.+.||+|+||.||+|... +|+.||||++... .......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999765 6899999998643 233456778999999999999999999988654 678
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
++||||++ ++|.+++... .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVL---HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5898888764 489999999999999999999 67899999999999999999999999999998764
Q ss_pred CCCCcc--------ccccccccccccCccccC-CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhh--hhhhcc--
Q 046240 627 GEDQSM--------TQTQTLATIGYMAPEYGI-ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSL--KHWVNG-- 693 (763)
Q Consensus 627 ~~~~~~--------~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~--~~~~~~-- 693 (763)
...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.......... ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 322111 122346899999999865 4778999999999999999999999997643222111 010000
Q ss_pred -------cCChhHHHHHHhhcCCCccccH-HHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 694 -------LLPVSLMEVVNKTLLSPPEKDF-AAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 694 -------~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.......+.+..... .+.... .....+...+.+++.+|++.||++|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPM-YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCC-CCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccccchhhHHhhcccC-CCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 001122222222111 111111 111233567889999999999999999999986
No 221
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.5e-37 Score=323.56 Aligned_cols=253 Identities=23% Similarity=0.282 Sum_probs=193.0
Q ss_pred HHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeec---------
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSN--------- 542 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 542 (763)
..++|+..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 467899999999999999999976 47899999999654 2345778899999999999999999998854
Q ss_pred ----CCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEee
Q 046240 543 ----DDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSD 618 (763)
Q Consensus 543 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~D 618 (763)
.+..++||||+++++|.+++......++......++.|+++||+|| |+.+|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI---HSQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHH---HhCCeecccCCHHhEEEcCCCCEEEee
Confidence 3567899999999999999987666678889999999999999999 678999999999999999999999999
Q ss_pred ecCceecCCCCC------------ccccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh
Q 046240 619 FGIAKLLSGEDQ------------SMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL 685 (763)
Q Consensus 619 fgla~~~~~~~~------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 685 (763)
||+++....... ........|++.|+|||++.+. .++.++|||||||++|||++ ||........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 999987642210 1122345689999999998754 78999999999999999998 5543221111
Q ss_pred hhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 686 SLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 686 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..... .......+.. ........+.+++..|++.||++|||+.++++
T Consensus 237 ~~~~~-------------~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKKL-------------RSVSIEFPPD---FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHH-------------HSTTCCCCTT---CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhc-------------cccccccCcc---ccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11111 1000000110 01122455789999999999999999999987
No 222
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.1e-38 Score=332.11 Aligned_cols=259 Identities=21% Similarity=0.302 Sum_probs=198.6
Q ss_pred ChHHHHHHHhccCcCceecccCCceEEEEEecCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCC--CCccceEEeeee
Q 046240 466 PYQDLSRATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIR--HRNLVKIISGCS 541 (763)
Q Consensus 466 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~ 541 (763)
.++.+....++|.+.+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++ ||||+++++++.
T Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 98 (313)
T 3cek_A 19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98 (313)
T ss_dssp -CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred CeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence 333444456789999999999999999998888999999998643 2345677899999999997 599999999999
Q ss_pred cCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecC
Q 046240 542 NDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGI 621 (763)
Q Consensus 542 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgl 621 (763)
..+..++||| +.+++|.+++.... .+++..+..++.|+++||.|| |+.+|+||||||+||++++ +.+||+|||+
T Consensus 99 ~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 99 TDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTI---HQHGIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp CSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred cCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEEEC-CeEEEeeccc
Confidence 9999999999 56889999997654 688999999999999999999 7789999999999999975 7999999999
Q ss_pred ceecCCCCCccccccccccccccCccccCC-----------CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhh
Q 046240 622 AKLLSGEDQSMTQTQTLATIGYMAPEYGIE-----------RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHW 690 (763)
Q Consensus 622 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~ 690 (763)
++.+.............|++.|+|||.+.+ ..++.++|||||||++|||++|+.||..........
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--- 249 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--- 249 (313)
T ss_dssp SCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH---
T ss_pred cccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH---
Confidence 987654333323345578999999998765 478889999999999999999999997632221111
Q ss_pred hcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 691 VNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 691 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+++......... .....+.+++..||+.||++||++.|+++
T Consensus 250 ---------~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 250 ---------HAIIDPNHEIEFPD------IPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ---------HHHHCTTSCCCCCC------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---------HHHHhcccccCCcc------cchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11111111111011 11346889999999999999999999986
No 223
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.9e-37 Score=356.30 Aligned_cols=261 Identities=23% Similarity=0.351 Sum_probs=207.5
Q ss_pred HHHhccCcCceecccCCceEEEEEec----CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCce
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAELD----DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 546 (763)
...++|.+.+.||+|+||.||+|... .+..||+|++... .....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cce
Confidence 34578999999999999999999764 2467999998754 23445778999999999999999999999854 568
Q ss_pred EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 547 ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
++||||+++|+|.+++......+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 999999999999999987666789999999999999999999 67899999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
.... .......+++.|+|||++.+..++.++|||||||++|||++ |..||........ ...+...
T Consensus 543 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~-------------~~~i~~~ 608 (656)
T 2j0j_A 543 DSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-------------IGRIENG 608 (656)
T ss_dssp C-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-------------HHHHHHT
T ss_pred CCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH-------------HHHHHcC
Confidence 3322 22233456789999999988899999999999999999997 9999976432211 0111111
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
.....+ ..+...+.+++..||+.||++||++.++++.|+++++.+
T Consensus 609 ~~~~~~-------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 609 ERLPMP-------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp CCCCCC-------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCC-------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 100111 123456889999999999999999999999999887653
No 224
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.3e-37 Score=355.14 Aligned_cols=243 Identities=22% Similarity=0.291 Sum_probs=200.7
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 548 (763)
.++|.+.+.||+|+||.||+|... +++.||||+++... ....+.+..|..++..+ +||+|+++++++...+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 468999999999999999999765 68899999998653 22356678899999987 79999999999999999999
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++|+|..++...+ .+++..+..++.||+.||+|| |+++|+||||||+|||++.++.+||+|||+++.....
T Consensus 420 V~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFL---QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 999999999999997654 589999999999999999999 7789999999999999999999999999999864322
Q ss_pred CCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcC
Q 046240 629 DQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLL 708 (763)
Q Consensus 629 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 708 (763)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ...++.....
T Consensus 496 ~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~-------------~~~i~~~~~~ 560 (674)
T 3pfq_A 496 GV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-------------FQSIMEHNVA 560 (674)
T ss_dssp TC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------------HHHHHSSCCC
T ss_pred Cc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH-------------HHHHHhCCCC
Confidence 22 33456799999999999999999999999999999999999999976432211 1111111111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHccccCcCCCCCH
Q 046240 709 SPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINA 743 (763)
Q Consensus 709 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~ 743 (763)
. |. ....++.+++..|++.||++||++
T Consensus 561 ~-p~-------~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 561 Y-PK-------SMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp C-CT-------TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred C-Cc-------cCCHHHHHHHHHHccCCHHHCCCC
Confidence 1 11 124568899999999999999997
No 225
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-37 Score=335.79 Aligned_cols=266 Identities=22% Similarity=0.285 Sum_probs=194.8
Q ss_pred HHHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeec-------
Q 046240 471 SRATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSN------- 542 (763)
Q Consensus 471 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 542 (763)
....++|.+.+.||+|+||+||+|.. .+|+.||||++.... ....+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999965 579999999986542 223469999999999999999999843
Q ss_pred -------------------------------CCceEEEEEccCCCChhhhhcc---CCCCCCHHHHHHHHHHHHHHHHHH
Q 046240 543 -------------------------------DDFKALVLEYMPNGSLDIFLYS---STCMLDIFQRLNIMIDVASALEYL 588 (763)
Q Consensus 543 -------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~ia~~L~~L 588 (763)
....++||||+++ +|.+.+.. ....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2347899999985 77666653 344689999999999999999999
Q ss_pred HhcCCCCeEeCCCCCCCEEec-CCCcEEEeeecCceecCCCCCccccccccccccccCccccCCC-CCCcchhHHHHHHH
Q 046240 589 NFRHTTPIIHCDLKSSNVLLD-EDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIM 666 (763)
Q Consensus 589 h~~h~~~ivH~dlk~~NIll~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~ 666 (763)
|+.+|+||||||+||+++ .++.+||+|||+++.+.... ......+|+.|+|||++.+. .++.++||||+||+
T Consensus 158 ---H~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 ---HSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp ---HTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred ---HHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 789999999999999998 68899999999998764332 22345689999999988764 58999999999999
Q ss_pred HHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHH--hhcCC--Cc---ccc--HHHHHHHHHHHHHHHHHccccCc
Q 046240 667 LIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVN--KTLLS--PP---EKD--FAAKEQCVLSIFSLAMECTMELP 737 (763)
Q Consensus 667 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~l~~--~~---~~~--~~~~~~~~~~l~~l~~~cl~~~P 737 (763)
+|||++|+.||........ +...+.....+...++.. ..... .+ ... ..........+.+++.+|++.+|
T Consensus 232 l~ell~g~~pf~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQ-LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 9999999999986433221 111111101111111111 00000 00 000 00111234568999999999999
Q ss_pred CCCCCHHHHHH
Q 046240 738 EKRINAKCCNF 748 (763)
Q Consensus 738 ~~Rps~~~v~~ 748 (763)
++|||+.|+++
T Consensus 311 ~~R~t~~e~l~ 321 (383)
T 3eb0_A 311 DLRINPYEAMA 321 (383)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999984
No 226
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=9.3e-37 Score=330.78 Aligned_cols=262 Identities=22% Similarity=0.262 Sum_probs=198.4
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh--hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCce----
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE--CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFK---- 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 546 (763)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46899999999999999999965 47899999999754 233457788999999999999999999999877655
Q ss_pred --EEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 547 --ALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 547 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
++||||++ ++|.+++.. .+++..+..++.|+++||+|| |+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHH---HHCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 578777743 488999999999999999999 778999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhh--hh--------hcc
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLK--HW--------VNG 693 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~--~~--------~~~ 693 (763)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||........... .. ...
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 5322 234568999999998876 7889999999999999999999999976432221111 10 011
Q ss_pred cCChhHHHHHHhhcCCCccccHH-HHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 694 LLPVSLMEVVNKTLLSPPEKDFA-AKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 694 ~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.........+. .+...+..... ....+...+.+++..|++.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 269 LNDKAAKSYIQ-SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CSCHHHHHHHH-HSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhhhhhhh-ccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 01111122222 22222222111 11123567899999999999999999999986
No 227
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-37 Score=333.56 Aligned_cols=250 Identities=24% Similarity=0.289 Sum_probs=196.5
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh-HHHHHHHHHHHHH-HHhCCCCccceEEeeeecCCceEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC-ARAMKSFEVECEV-MKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+..|..+ ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 46788999999999999999976 578999999987542 2233445556555 67789999999999999999999999
Q ss_pred EccCCCChhhhhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEecCCCcEEEeeecCceecC
Q 046240 551 EYMPNGSLDIFLYS---STCMLDIFQRLNIMIDVASALEYLNFRHTT-PIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLS 626 (763)
Q Consensus 551 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 626 (763)
||+++ +|.+++.. ....+++..+..++.|+++||+|| |++ +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~l---H~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL---HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHH---HHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99986 88888764 345789999999999999999999 555 99999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCccccC----CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGI----ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
.. .......||+.|+|||++. ...++.++|||||||++|||++|+.||.........+ ...
T Consensus 206 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~------------~~~ 270 (340)
T 3an0_A 206 DS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL------------KQV 270 (340)
T ss_dssp CH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH------------HHH
T ss_pred cc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHH------------HHH
Confidence 21 1223357899999999864 4578999999999999999999999997532221111 111
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.......+. ..+...+.+++..||+.+|++||++.++++
T Consensus 271 ~~~~~~~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 271 VEEPSPQLPA------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHSCCCCCCG------GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hcCCCCCCCc------ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 2111111111 113456899999999999999999999986
No 228
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.2e-38 Score=340.24 Aligned_cols=254 Identities=9% Similarity=0.058 Sum_probs=180.7
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhC--CCCccceEE-------eee
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNI--RHRNLVKII-------SGC 540 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~ 540 (763)
..+|...+.||+|+||+||+|... +|+.||||++.... ....+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 346889999999999999999764 78999999998642 23456677785555444 699988865 333
Q ss_pred ecC-----------------CceEEEEEccCCCChhhhhccCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeE
Q 046240 541 SND-----------------DFKALVLEYMPNGSLDIFLYSSTCMLDIFQR------LNIMIDVASALEYLNFRHTTPII 597 (763)
Q Consensus 541 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~ia~~L~~Lh~~h~~~iv 597 (763)
... ...++||||++ |+|.+++...+..+++..+ ..++.|+++||+|| |+++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~L---H~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANL---QSKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHH---HHTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHH---HHCCCc
Confidence 322 33799999999 8999999864434455556 78889999999999 778999
Q ss_pred eCCCCCCCEEecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHcCCC
Q 046240 598 HCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIE--RKVSTRSDIYSYGIMLIETFTRKK 675 (763)
Q Consensus 598 H~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~ 675 (763)
||||||+|||++.++.+||+|||+++..... .....+++.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999876321 113456799999999987 789999999999999999999999
Q ss_pred CCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 676 PADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 676 p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
||......... .+...... ..............+...+.+++.+||+.||++||++.++++
T Consensus 292 Pf~~~~~~~~~--~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKG--SWKRPSLR----------VPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTT--CCCBCCTT----------SCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCccccc--chhhhhhh----------hccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99764322110 00000000 000000000000123456889999999999999999999974
No 229
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=4.4e-37 Score=323.23 Aligned_cols=268 Identities=25% Similarity=0.323 Sum_probs=199.5
Q ss_pred hccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH--HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEEE
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA--RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 551 (763)
++|+..+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999765 789999999875432 234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 552 YMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
|++ ++|.+++.... ..++...+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||.++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 998 58988887643 3688899999999999999999 778999999999999999999999999999987643221
Q ss_pred ccccccccccccccCccccCCCC-CCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhc-ccCCh-hHHHHH----
Q 046240 631 SMTQTQTLATIGYMAPEYGIERK-VSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVN-GLLPV-SLMEVV---- 703 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~-~~~~~-~~~~~i---- 703 (763)
......+++.|+|||.+.+.. ++.++|||||||++|||++|+.||............... +..+. ......
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 159 --TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp --CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred --ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 223456899999999987755 799999999999999999999999764332211110000 00000 000000
Q ss_pred -HhhcCCCccccHH-HHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 704 -NKTLLSPPEKDFA-AKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 704 -~~~l~~~~~~~~~-~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
............. ........+.+++.+|++.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000000 00112456889999999999999999999986
No 230
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.4e-37 Score=336.15 Aligned_cols=258 Identities=24% Similarity=0.265 Sum_probs=197.7
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC--------CCccceEEeeee---
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIR--------HRNLVKIISGCS--- 541 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~--- 541 (763)
.++|.+.+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46899999999999999999965 568899999997542 34567788999999985 788999999987
Q ss_pred -cCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEecCCC-------
Q 046240 542 -NDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTT-PIIHCDLKSSNVLLDEDM------- 612 (763)
Q Consensus 542 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~dlk~~NIll~~~~------- 612 (763)
.....++||||+.++.+..+.......+++..+..++.|+++||+|| |++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYL---HTKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 56689999999955555555444445689999999999999999999 666 999999999999999775
Q ss_pred ------------------------------------------cEEEeeecCceecCCCCCccccccccccccccCccccC
Q 046240 613 ------------------------------------------IAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGI 650 (763)
Q Consensus 613 ------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 650 (763)
.+||+|||.++..... .....||+.|+|||++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHH
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhc
Confidence 7999999999876422 23457899999999999
Q ss_pred CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhh-----hhhhhhh--hcccCChhH------------------------
Q 046240 651 ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAA-----ELSLKHW--VNGLLPVSL------------------------ 699 (763)
Q Consensus 651 ~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-----~~~~~~~--~~~~~~~~~------------------------ 699 (763)
+..++.++|||||||++|||++|+.||...... ....... ..+..+...
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 999999999999999999999999999753211 0011100 011111110
Q ss_pred ----HHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 700 ----MEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 700 ----~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+.+.... .........+.+++.+||+.||++|||++|+++
T Consensus 347 ~~~~~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 347 PWGLFEVLVEKY--------EWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCHHHHHHHTS--------CCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CcchhHhhhhhc--------ccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01110000 011234667899999999999999999999985
No 231
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8.8e-37 Score=318.95 Aligned_cols=251 Identities=23% Similarity=0.300 Sum_probs=201.2
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhH--HHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA--RAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
..++|.+.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4578999999999999999999765 789999999975432 2456788999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC---CcEEEeeecCceecC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED---MIAHLSDFGIAKLLS 626 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~---~~~kl~Dfgla~~~~ 626 (763)
+||+++++|.+++.... .+++..+..++.|+++||.|| |+.+++||||||+||+++.+ +.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~L---H~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM---HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHH---HHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999988886543 588999999999999999999 77899999999999999754 479999999998764
Q ss_pred CCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhh
Q 046240 627 GEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKT 706 (763)
Q Consensus 627 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 706 (763)
... ......+++.|+|||.+.+ .++.++||||||+++|||++|..||........ ... +....
T Consensus 176 ~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~------------~~~~~ 238 (287)
T 2wei_A 176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKR------------VETGK 238 (287)
T ss_dssp CCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH------------HHHCC
T ss_pred CCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHH------------HHcCC
Confidence 322 1233458999999998765 489999999999999999999999976432211 111 11111
Q ss_pred cCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 707 LLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 707 l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.... ......+...+.+++..|++.+|++|||+.++++
T Consensus 239 ~~~~----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 239 YAFD----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCC----SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCC----chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1000 0011123456889999999999999999999987
No 232
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8e-37 Score=337.30 Aligned_cols=198 Identities=23% Similarity=0.288 Sum_probs=170.6
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhC------CCCccceEEeeeecCCce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNI------RHRNLVKIISGCSNDDFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~ 546 (763)
..+|++.+.||+|+||.||+|... +++.||||++.... .....+.+|+.+++.+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 467999999999999999999654 68999999997543 3345667788888877 577999999999999999
Q ss_pred EEEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc--EEEeeecCce
Q 046240 547 ALVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI--AHLSDFGIAK 623 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~ 623 (763)
++||||+. ++|.+++.... ..+++..+..++.|+++||+|| |+.+|+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL---HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 58888876643 3589999999999999999999 6779999999999999999887 9999999998
Q ss_pred ecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhh
Q 046240 624 LLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMF 681 (763)
Q Consensus 624 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~ 681 (763)
..... .....||+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 251 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 65322 233578999999999999999999999999999999999999997643
No 233
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=327.92 Aligned_cols=255 Identities=25% Similarity=0.304 Sum_probs=196.1
Q ss_pred HHHHHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCccceEEeeeec----
Q 046240 469 DLSRATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRNLVKIISGCSN---- 542 (763)
Q Consensus 469 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 542 (763)
++....++|.+.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3334568899999999999999999976 478999999987542 2346788999999999 79999999999976
Q ss_pred --CCceEEEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeee
Q 046240 543 --DDFKALVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDF 619 (763)
Q Consensus 543 --~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Df 619 (763)
.+..++||||+++++|.+++.... ..++......++.|++.||.|| |+.+|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCcHHHEEEcCCCCEEEeeC
Confidence 467899999999999999997643 3688999999999999999999 6789999999999999999999999999
Q ss_pred cCceecCCCCCccccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhccc
Q 046240 620 GIAKLLSGEDQSMTQTQTLATIGYMAPEYGI-----ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGL 694 (763)
Q Consensus 620 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 694 (763)
|++....... .......|++.|+|||++. +..++.++|||||||++|||++|..||..........
T Consensus 174 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------- 244 (326)
T 2x7f_A 174 GVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF------- 244 (326)
T ss_dssp TTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-------
T ss_pred cCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH-------
Confidence 9998764221 1223456899999999986 5678999999999999999999999997643221110
Q ss_pred CChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 695 LPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 695 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.+........... .+...+.+++..||..||++||++.++++
T Consensus 245 ------~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 ------LIPRNPAPRLKSK------KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ------HHHHSCCCCCSCS------CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ------HhhcCccccCCcc------ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0111000000000 12456889999999999999999999986
No 234
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=330.09 Aligned_cols=260 Identities=22% Similarity=0.290 Sum_probs=200.3
Q ss_pred HHhccCcCceecccCCceEEEEEecCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
..++|.+.+.||+|+||.||+|...+ .||+|+++... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35789999999999999999998764 59999986432 223355678999999999999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC-
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED- 629 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~- 629 (763)
||+++++|.+++...+..+++..+..++.|+++||+|| |+.+|+||||||+||+++ ++.+||+|||+++......
T Consensus 109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHH---HHTTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 99999999999987766789999999999999999999 678999999999999998 6799999999987653211
Q ss_pred --CccccccccccccccCccccCC---------CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChh
Q 046240 630 --QSMTQTQTLATIGYMAPEYGIE---------RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVS 698 (763)
Q Consensus 630 --~~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 698 (763)
.........|++.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~--------- 254 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW-Q--------- 254 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH-H---------
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-H---------
Confidence 1122234568999999998764 457889999999999999999999997643222110 0
Q ss_pred HHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 699 LMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 699 ~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
+.......... ..+...+.+++..||+.+|++||++.+++++|+++..+.
T Consensus 255 ----~~~~~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 255 ----MGTGMKPNLSQ-----IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp ----HHTTCCCCCCC-----SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred ----hccCCCCCCCc-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111000000 012345889999999999999999999999999887664
No 235
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.3e-36 Score=345.97 Aligned_cols=162 Identities=19% Similarity=0.205 Sum_probs=110.1
Q ss_pred cccceeecccccccCCCC-ccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccc-cCCcccCCCcC
Q 046240 233 SIFLLLDLELNKLTGPIP-VTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSG-DIPATIGGLKD 310 (763)
Q Consensus 233 ~~L~~L~L~~N~l~~~~p-~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~ 310 (763)
++|+.|++++|++++..| ..+..+++ |++|++++|.+++..|. .+.++++|++|++++|++++ .+|..|+.+++
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEK--LLYLDISYTNTKIDFDG--IFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTT--CCEEECTTSCCEECCTT--TTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred CCCCeeECCCCccCCccChhhhhcccc--CCEEECcCCCCCccchh--hhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 333333333333333333 33444433 55555555555555555 56667777777777777776 36777777888
Q ss_pred ccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCcc-ccccccccC
Q 046240 311 VQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFA-NFTAKSFMG 389 (763)
Q Consensus 311 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~l~~~~~~~ 389 (763)
|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|++|+++..++....++ .+..+++.+
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~ 554 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTN 554 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCS
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccC
Confidence 8888888888887777778888888888888888888778888888888888888888885444434444 478888888
Q ss_pred CCcccCCCC
Q 046240 390 NEKLCGLPH 398 (763)
Q Consensus 390 n~~~c~~p~ 398 (763)
||+.|+|+.
T Consensus 555 N~~~c~c~~ 563 (606)
T 3vq2_A 555 NSVACICEH 563 (606)
T ss_dssp CCCCCSSTT
T ss_pred CCcccCCcc
Confidence 988888873
No 236
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4e-36 Score=321.68 Aligned_cols=264 Identities=20% Similarity=0.271 Sum_probs=202.3
Q ss_pred HhccCcCceecccCCceEEEEEe--cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCc------cceEEeeeecCCc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL--DDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRN------LVKIISGCSNDDF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 545 (763)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999976 368899999997542 34567788999999887654 9999999999999
Q ss_pred eEEEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC--------------
Q 046240 546 KALVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE-------------- 610 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~-------------- 610 (763)
.++||||+ +++|.+++.... ..+++..+..++.|+++||+|| |+++|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFL---HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889988887654 3688999999999999999999 6789999999999999987
Q ss_pred -----CCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh
Q 046240 611 -----DMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL 685 (763)
Q Consensus 611 -----~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 685 (763)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|..||........
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 668999999999875422 2345689999999999999999999999999999999999999976433221
Q ss_pred -hhhhhhcccCChhHH-----------------------HHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCC
Q 046240 686 -SLKHWVNGLLPVSLM-----------------------EVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRI 741 (763)
Q Consensus 686 -~~~~~~~~~~~~~~~-----------------------~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp 741 (763)
.......+..+.... ..+......... .......+...+.+++.+|++.||++||
T Consensus 243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKE-FMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGG-GCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhh-hcccchhhHHHHHHHHHHHhCcCccccc
Confidence 111111111221111 111111110000 0001122356789999999999999999
Q ss_pred CHHHHHH
Q 046240 742 NAKCCNF 748 (763)
Q Consensus 742 s~~~v~~ 748 (763)
|+.|+++
T Consensus 322 t~~ell~ 328 (339)
T 1z57_A 322 TLREALK 328 (339)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
No 237
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.2e-36 Score=332.28 Aligned_cols=263 Identities=25% Similarity=0.318 Sum_probs=194.2
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCC------ceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDD------FKA 547 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~ 547 (763)
..+|...+.||+|+||+||+|....+..||+|++..... ...+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 357999999999999999999887777799998864321 2236999999999999999999985433 378
Q ss_pred EEEEccCCCChhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEec-CCCcEEEeeecCcee
Q 046240 548 LVLEYMPNGSLDIFLY--SSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLD-EDMIAHLSDFGIAKL 624 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~-~~~~~kl~Dfgla~~ 624 (763)
+||||++++.+..... .....+++..+..++.|+++||+|| |+.+|+||||||+||+++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI---HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---HHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998865544432 1234688999999999999999999 778999999999999999 789999999999988
Q ss_pred cCCCCCccccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhc--ccCCh-hHH
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVN--GLLPV-SLM 700 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~--~~~~~-~~~ 700 (763)
+.... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||........ +..... +..+. .+.
T Consensus 192 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 192 LIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ-LVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHH
T ss_pred ccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHH
Confidence 64332 22345789999999988664 589999999999999999999999976433221 111111 11111 111
Q ss_pred HHHHhhcCC--Cccc---cHH--HHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 701 EVVNKTLLS--PPEK---DFA--AKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 701 ~~i~~~l~~--~~~~---~~~--~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
. ....... .+.. ... .......++.+++.+|++.||++|||+.|+++
T Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 268 T-MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp H-HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred h-hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 1 1111100 0000 000 00113457899999999999999999999985
No 238
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=339.83 Aligned_cols=307 Identities=20% Similarity=0.176 Sum_probs=277.2
Q ss_pred CCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccC
Q 046240 75 NSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITN 154 (763)
Q Consensus 75 ~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~ 154 (763)
...++++|+|++|.+++..|..|.++++|++|+|++|.++ .+|...|.++++|++|+|++|++++..|..|.+
T Consensus 54 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-------~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 126 (477)
T 2id5_A 54 SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-------LIPLGVFTGLSNLTKLDISENKIVILLDYMFQD 126 (477)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-------SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred CCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-------ccCcccccCCCCCCEEECCCCccccCChhHccc
Confidence 3568999999999999988999999999999999999996 889888889999999999999999999999999
Q ss_pred CCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccc
Q 046240 155 ASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSI 234 (763)
Q Consensus 155 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~ 234 (763)
+++|++|+|++|+++++.+..|.++++|+.|+ +++|++++..+..+.++. +|++|+|++|++.+..+..|..+++
T Consensus 127 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~----l~~n~l~~~~~~~l~~l~-~L~~L~l~~n~i~~~~~~~~~~l~~ 201 (477)
T 2id5_A 127 LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLT----LEKCNLTSIPTEALSHLH-GLIVLRLRHLNINAIRDYSFKRLYR 201 (477)
T ss_dssp CTTCCEEEECCTTCCEECTTSSTTCTTCCEEE----EESCCCSSCCHHHHTTCT-TCCEEEEESCCCCEECTTCSCSCTT
T ss_pred cccCCEEECCCCccceeChhhccCCCCCCEEE----CCCCcCcccChhHhcccC-CCcEEeCCCCcCcEeChhhcccCcc
Confidence 99999999999999999999999999999999 889999987777788888 9999999999999999999999999
Q ss_pred cceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEE
Q 046240 235 FLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNI 314 (763)
Q Consensus 235 L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 314 (763)
|+.|++++|.+.+.+|.......+ |+.|+|++|++++..+. .+..+++|+.|+|++|++++..+..|.++++|+.|
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~--L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLN--LTSLSITHCNLTAVPYL--AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEI 277 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCC--CSEEEEESSCCCSCCHH--HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEE
T ss_pred cceeeCCCCccccccCcccccCcc--ccEEECcCCcccccCHH--HhcCccccCeeECCCCcCCccChhhccccccCCEE
Confidence 999999999988888877666654 99999999999944334 68899999999999999999889999999999999
Q ss_pred EccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCccc
Q 046240 315 SLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLC 394 (763)
Q Consensus 315 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c 394 (763)
+|++|++++..|..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|++++..+....+.......+.++...|
T Consensus 278 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C 357 (477)
T 2id5_A 278 QLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTC 357 (477)
T ss_dssp ECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBE
T ss_pred ECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCcee
Confidence 99999999988999999999999999999999999999999999999999999999876533222233345667777888
Q ss_pred CCC
Q 046240 395 GLP 397 (763)
Q Consensus 395 ~~p 397 (763)
..|
T Consensus 358 ~~p 360 (477)
T 2id5_A 358 ATP 360 (477)
T ss_dssp EES
T ss_pred CCc
Confidence 766
No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=324.97 Aligned_cols=262 Identities=22% Similarity=0.266 Sum_probs=196.5
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCc-----
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDF----- 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 545 (763)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 36789999999999999999976 478999999986532 3345678899999999999999999999987654
Q ss_pred -eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 546 -KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 546 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
.++||||++ ++|.+++.. .+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~L---H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYI---HSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHH---HHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588877743 488999999999999999999 678999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhh--hhh--------hhcc
Q 046240 625 LSGEDQSMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELS--LKH--------WVNG 693 (763)
Q Consensus 625 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~--~~~--------~~~~ 693 (763)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ... +...
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 5321 234568999999998876 67899999999999999999999999864322110 000 0011
Q ss_pred cCChhHHHHHHhhcCCCccccH-HHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 694 LLPVSLMEVVNKTLLSPPEKDF-AAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 694 ~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.........+. .+...+.... .........+.+++.+|++.||++||++.++++
T Consensus 251 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 251 LNDKAAKSYIQ-SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CSCHHHHHHHH-TSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhHHHHHHHH-hCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 01111111221 1111111110 001123557899999999999999999999985
No 240
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.1e-36 Score=327.19 Aligned_cols=201 Identities=25% Similarity=0.319 Sum_probs=171.4
Q ss_pred HHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CC-----ccceEEeeeecCCc
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIR-HR-----NLVKIISGCSNDDF 545 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~~ 545 (763)
..++|.+.+.||+|+||+||+|... +++.||||++.... .....+.+|+.+++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999665 68899999997542 33456778888888874 44 49999999999999
Q ss_pred eEEEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEec--CCCcEEEeeecCc
Q 046240 546 KALVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLD--EDMIAHLSDFGIA 622 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~--~~~~~kl~Dfgla 622 (763)
.++||||+++ +|.+++.... ..+++..+..++.|++.||.|||. |+.+|+||||||+||+++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 9999999965 8988887653 468999999999999999999953 468999999999999995 4788999999999
Q ss_pred eecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhh
Q 046240 623 KLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMF 681 (763)
Q Consensus 623 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~ 681 (763)
+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 876422 234578999999999999999999999999999999999999998643
No 241
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.7e-36 Score=325.06 Aligned_cols=275 Identities=21% Similarity=0.245 Sum_probs=189.2
Q ss_pred HHHHHHHhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCc-
Q 046240 468 QDLSRATNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDF- 545 (763)
Q Consensus 468 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 545 (763)
.......++|.+.+.||+|+||.||+|... +|+.||||++.... .......++++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999764 68999999886542 223345677888888999999999999865332
Q ss_pred ------eEEEEEccCCCChhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC-CCcEEE
Q 046240 546 ------KALVLEYMPNGSLDIFLY--SSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE-DMIAHL 616 (763)
Q Consensus 546 ------~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~-~~~~kl 616 (763)
.++||||++++.+..+.. .....++...+..++.|++.|+.|||. |+.+|+||||||+||+++. ++.+||
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 789999998753332221 233468889999999999999999942 3999999999999999997 899999
Q ss_pred eeecCceecCCCCCccccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhc--c
Q 046240 617 SDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVN--G 693 (763)
Q Consensus 617 ~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~--~ 693 (763)
+|||+++.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ...... +
T Consensus 174 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~ 249 (360)
T 3e3p_A 174 CDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-LHEIVRVLG 249 (360)
T ss_dssp CCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHC
T ss_pred eeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-HHHHHHHcC
Confidence 9999998765332 22345689999999988654 489999999999999999999999976433221 111111 1
Q ss_pred cCChhHHHHHHhhcCC-----CccccHHH-----HHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 694 LLPVSLMEVVNKTLLS-----PPEKDFAA-----KEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 694 ~~~~~~~~~i~~~l~~-----~~~~~~~~-----~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+......+...... ........ .......+.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111111111110000 00000000 0012567899999999999999999999985
No 242
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=334.19 Aligned_cols=200 Identities=23% Similarity=0.324 Sum_probs=153.4
Q ss_pred HhccCc-CceecccCCceEEEEEec---CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeee--cCCceE
Q 046240 474 TNRFGR-DNLIGIGSFGYVYKAELD---DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCS--NDDFKA 547 (763)
Q Consensus 474 ~~~~~~-~~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 547 (763)
.+.|.+ +++||+|+||+||+|... +++.||||++.... ....+.+|+.++++++||||+++++++. .....+
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 455665 568999999999999865 57899999987542 2346788999999999999999999994 467899
Q ss_pred EEEEccCCCChhhhhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe----cCCCcEE
Q 046240 548 LVLEYMPNGSLDIFLYSS--------TCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL----DEDMIAH 615 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~--------~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll----~~~~~~k 615 (763)
+||||+++ +|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HhCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999975 676666421 12488999999999999999999 77899999999999999 6778999
Q ss_pred EeeecCceecCCCCC-ccccccccccccccCccccCC-CCCCcchhHHHHHHHHHHHHcCCCCCch
Q 046240 616 LSDFGIAKLLSGEDQ-SMTQTQTLATIGYMAPEYGIE-RKVSTRSDIYSYGIMLIETFTRKKPADK 679 (763)
Q Consensus 616 l~Dfgla~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~elltg~~p~~~ 679 (763)
|+|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999987643221 122345678999999999877 4589999999999999999999999965
No 243
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.6e-36 Score=334.08 Aligned_cols=262 Identities=24% Similarity=0.301 Sum_probs=192.1
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeecC------Cce
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSND------DFK 546 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 546 (763)
..+|...+.||+|+||.||+|... +|+.||||++.... ....+|++++++++||||+++++++... ...
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 347899999999999999999775 68999999986542 2234699999999999999999988432 236
Q ss_pred EEEEEccCCCChhhhhc---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC-CcEEEeeecCc
Q 046240 547 ALVLEYMPNGSLDIFLY---SSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED-MIAHLSDFGIA 622 (763)
Q Consensus 547 ~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~-~~~kl~Dfgla 622 (763)
++||||+++ ++...+. .....+++..+..++.|+++||+|| |+.+|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999986 5554443 2344689999999999999999999 78999999999999999965 67899999999
Q ss_pred eecCCCCCccccccccccccccCccccCCC-CCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcc---cCChh
Q 046240 623 KLLSGEDQSMTQTQTLATIGYMAPEYGIER-KVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNG---LLPVS 698 (763)
Q Consensus 623 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~ 698 (763)
+.+.... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||....... .+...+.. ...+.
T Consensus 205 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~-~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 205 KQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQ 280 (420)
T ss_dssp EECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHH
T ss_pred hhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHH
Confidence 8764332 22345789999999998764 78999999999999999999999997643222 12221111 11111
Q ss_pred HHHHHHhhcCC--Ccc--ccHHH---HHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 699 LMEVVNKTLLS--PPE--KDFAA---KEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 699 ~~~~i~~~l~~--~~~--~~~~~---~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.+. ...... .+. ..... ......++.+++.+|+..||++||++.|+++
T Consensus 281 ~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 281 IREM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 1111 100000 000 00000 0112456899999999999999999999985
No 244
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.1e-36 Score=324.49 Aligned_cols=268 Identities=24% Similarity=0.300 Sum_probs=198.4
Q ss_pred HHhccCcCceecccCCceEEEEEe--cCCceEEEEEeehhhH--HHHHHHHHHHHHHHhC---CCCccceEEeeee----
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAEL--DDGIEVAIKVFHQECA--RAMKSFEVECEVMKNI---RHRNLVKIISGCS---- 541 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 541 (763)
+.++|.+.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999977 4688999999864321 1223456677777666 8999999999987
Q ss_pred -cCCceEEEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeee
Q 046240 542 -NDDFKALVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDF 619 (763)
Q Consensus 542 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Df 619 (763)
.....++||||++ |+|.+++.... ..+++..+..++.|+++||.|| |+.+|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999998 59999887643 3589999999999999999999 7789999999999999999999999999
Q ss_pred cCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhh---cccCC
Q 046240 620 GIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWV---NGLLP 696 (763)
Q Consensus 620 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~---~~~~~ 696 (763)
|+++..... .......++..|+|||++.+..++.++|||||||++|||++|+.||........ ..... .....
T Consensus 165 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCG
T ss_pred cccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHcCCCCc
Confidence 999875421 123446789999999999999999999999999999999999999976432211 11110 00000
Q ss_pred hhHHH---HHHhhcCCCcccc-HHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 697 VSLME---VVNKTLLSPPEKD-FAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 697 ~~~~~---~i~~~l~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
..+.. ............. ..........+.+++.+|++.+|++||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 0000000000000 0000123456889999999999999999999984
No 245
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.3e-36 Score=332.15 Aligned_cols=251 Identities=23% Similarity=0.298 Sum_probs=186.3
Q ss_pred hccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEEEEcc
Q 046240 475 NRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALVLEYM 553 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 553 (763)
+.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+.+++++ +||||+++++++...+..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 4455678899999999987766789999999987543 24567899999876 8999999999999999999999999
Q ss_pred CCCChhhhhccCCCCC------CHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCC-------------CcE
Q 046240 554 PNGSLDIFLYSSTCML------DIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDED-------------MIA 614 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~------~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~-------------~~~ 614 (763)
+ |+|.+++....... .+..+..++.|++.||+|| |+.+|+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH---HHCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 59999997653211 2223467999999999999 67899999999999999754 489
Q ss_pred EEeeecCceecCCCCCcc--ccccccccccccCccccCC-------CCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhh
Q 046240 615 HLSDFGIAKLLSGEDQSM--TQTQTLATIGYMAPEYGIE-------RKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAE 684 (763)
Q Consensus 615 kl~Dfgla~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~ 684 (763)
||+|||+++.+....... ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999999875433211 2234579999999998865 678999999999999999999 999997643222
Q ss_pred hhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 685 LSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.. ++...... +.........+..++.+++.+|++.||++||++.+|++
T Consensus 248 ~~---------------i~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 SN---------------IIRGIFSL-DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH---------------HHHTCCCC-CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH---------------HhcCCCCc-ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 11111111 00000011234567899999999999999999999985
No 246
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-35 Score=344.22 Aligned_cols=302 Identities=22% Similarity=0.250 Sum_probs=278.8
Q ss_pred ceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCC
Q 046240 78 RVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASK 157 (763)
Q Consensus 78 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~ 157 (763)
+++.|++++|.+++..+..|+.+++|++|+|++|.++ .+|..+. ++++|++|++++|.+++..|..+.++++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------~lp~~l~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 326 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-------ELPSGLV-GLSTLKKLVLSANKFENLCQISASNFPS 326 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-------CCCSSCC-SCTTCCEEECTTCCCSBGGGGCGGGCTT
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-------CCChhhc-ccccCCEEECccCCcCcCchhhhhccCc
Confidence 7999999999999888888999999999999999995 7888764 8999999999999999999999999999
Q ss_pred CCeeeecCcccccccc-cccCCCCchhhhhhhhhccCCcccccC--CcccccccccccEEEeecCccccccccccCCccc
Q 046240 158 LTILELGGNSFSGFIP-NTIGNLRNIEWLGLVIGLIGNPLNGIL--PSSIVNLSISLERLYISNCSITGNIPQVMGNLSI 234 (763)
Q Consensus 158 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~~l~~n~l~~~~--p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~ 234 (763)
|++|++++|++.+.+| ..|.++++|+.|+ +++|.+++.. |..+.+++ +|++|++++|++++..|..|..+++
T Consensus 327 L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~----l~~n~l~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~ 401 (606)
T 3t6q_A 327 LTHLSIKGNTKRLELGTGCLENLENLRELD----LSHDDIETSDCCNLQLRNLS-HLQSLNLSYNEPLSLKTEAFKECPQ 401 (606)
T ss_dssp CSEEECCSCSSCCBCCSSTTTTCTTCCEEE----CCSSCCCEEEESTTTTTTCT-TCCEEECCSCSCEEECTTTTTTCTT
T ss_pred CCEEECCCCCcccccchhhhhccCcCCEEE----CCCCccccccCcchhcccCC-CCCEEECCCCcCCcCCHHHhcCCcc
Confidence 9999999999986665 4599999999999 8899999876 88899998 9999999999999999999999999
Q ss_pred cceeecccccccCCCCcc-ccccCCCCccEEEecCCccccCCCCccccccCCcccEEEccccccccc---CCcccCCCcC
Q 046240 235 FLLLDLELNKLTGPIPVT-FGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGD---IPATIGGLKD 310 (763)
Q Consensus 235 L~~L~L~~N~l~~~~p~~-~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~ 310 (763)
|++|++++|++++..|.. +.++++ |++|++++|.+++..|. .+..+++|++|++++|++++. .+..+..+++
T Consensus 402 L~~L~l~~n~l~~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~ 477 (606)
T 3t6q_A 402 LELLDLAFTRLKVKDAQSPFQNLHL--LKVLNLSHSLLDISSEQ--LFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGR 477 (606)
T ss_dssp CSEEECTTCCEECCTTCCTTTTCTT--CCEEECTTCCCBTTCTT--TTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTT
T ss_pred CCeEECCCCcCCCcccchhhhCccc--CCEEECCCCccCCcCHH--HHhCCCCCCEEECCCCCCCccccccchhhccCCC
Confidence 999999999999876654 888876 99999999999988888 789999999999999999873 3467999999
Q ss_pred ccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC-CCccccccccccC
Q 046240 311 VQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG-GPFANFTAKSFMG 389 (763)
Q Consensus 311 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~ 389 (763)
|+.|++++|++++..|..|..+++|++|+|++|++++..|..+..++.| .|++++|++++.+|.. ..++.+..+++.+
T Consensus 478 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 556 (606)
T 3t6q_A 478 LEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQ 556 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTT
T ss_pred ccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCC
Confidence 9999999999998889999999999999999999999999999999999 9999999999988865 5577889999999
Q ss_pred CCcccCCC
Q 046240 390 NEKLCGLP 397 (763)
Q Consensus 390 n~~~c~~p 397 (763)
||+.|+|+
T Consensus 557 N~~~c~c~ 564 (606)
T 3t6q_A 557 NPLDCTCS 564 (606)
T ss_dssp CCEECSGG
T ss_pred CCccccCC
Confidence 99999987
No 247
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=333.67 Aligned_cols=250 Identities=21% Similarity=0.283 Sum_probs=187.1
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEEEEc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 552 (763)
..+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+....++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 457888999999999997766666789999999865432 2346799999999 799999999999999999999999
Q ss_pred cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC-----CCcEEEeeecCceecCC
Q 046240 553 MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE-----DMIAHLSDFGIAKLLSG 627 (763)
Q Consensus 553 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~-----~~~~kl~Dfgla~~~~~ 627 (763)
++ |+|.+++..............++.|+++||+|| |+.+|+||||||+||+++. ...+||+|||+++....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL---HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHH---HHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHH---HHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 96 599999987655455556678999999999999 7789999999999999953 33688999999987653
Q ss_pred CCCc-cccccccccccccCccccC---CCCCCcchhHHHHHHHHHHHHc-CCCCCchhhhhhhhhhhhhcccCChhHHHH
Q 046240 628 EDQS-MTQTQTLATIGYMAPEYGI---ERKVSTRSDIYSYGIMLIETFT-RKKPADKMFAAELSLKHWVNGLLPVSLMEV 702 (763)
Q Consensus 628 ~~~~-~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slGv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (763)
.... .......||+.|+|||++. ...++.++|||||||++|||++ |..||..........
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--------------- 240 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--------------- 240 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH---------------
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH---------------
Confidence 3221 2234567999999999987 4667889999999999999999 999986532221110
Q ss_pred HHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 703 VNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 703 i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+.......... . .......+.+++.+|++.||++||++.+|++
T Consensus 241 ~~~~~~~~~~~-~--~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 241 LLGACSLDCLH-P--EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HTTCCCCTTSC-T--TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhccCCccccC-c--cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00000000000 0 0112345789999999999999999999983
No 248
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.2e-36 Score=324.38 Aligned_cols=253 Identities=26% Similarity=0.276 Sum_probs=175.9
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh-HHHHHHHHHHHH-HHHhCCCCccceEEeeeecCCceEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC-ARAMKSFEVECE-VMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.++|...+.||+|+||.||+|... +|+.||||++.... ......+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367889999999999999999774 78999999997542 233445556665 666779999999999999999999999
Q ss_pred EccCCCChhhhhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 551 EYMPNGSLDIFLYS----STCMLDIFQRLNIMIDVASALEYLNFRHTT-PIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 551 e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
||+++ +|.+++.. ....+++..+..++.|+++||.|| |+. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL---KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHH---HHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHH---hccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99986 77766652 234688999999999999999999 566 9999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCcccc----CCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHH
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYG----IERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLME 701 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 701 (763)
.... ......|++.|+|||++ .+..++.++|||||||++|||++|+.||..................+.
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---- 249 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQ---- 249 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCC----
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCC----
Confidence 4322 22334689999999998 466789999999999999999999999976332211111111110000
Q ss_pred HHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 702 VVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 702 ~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+..... ..+...+.+++..||+.||++||++.++++
T Consensus 250 -----~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 250 -----LSNSEE------REFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -----CCCCSS------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----CCCccc------ccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000000 112456889999999999999999999975
No 249
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=319.66 Aligned_cols=251 Identities=22% Similarity=0.237 Sum_probs=179.7
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+..+..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467889999999999999999775 78999999997542 222334445556788889999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTT-PIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
||+ ++.+..+.......+++..+..++.|+++||.|| |++ +|+||||||+||+++.++.+||+|||++..+....
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL---KEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 5566666554445689999999999999999999 553 89999999999999999999999999997764322
Q ss_pred CccccccccccccccCccccC-----CCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHH
Q 046240 630 QSMTQTQTLATIGYMAPEYGI-----ERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVN 704 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 704 (763)
......+++.|+|||++. ...++.++|||||||++|||++|+.||............ ++.
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~------------~~~ 244 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK------------VLQ 244 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH------------HHH
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHH------------Hhc
Confidence 223456899999999984 567889999999999999999999999763222111111 111
Q ss_pred hhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 705 KTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 705 ~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
......+.. ..+...+.+++..||+.||++||+++++++
T Consensus 245 ~~~~~~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 245 EEPPLLPGH-----MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SCCCCCCSS-----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCCCCCcc-----CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111011110 012456889999999999999999999985
No 250
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.3e-35 Score=319.83 Aligned_cols=264 Identities=20% Similarity=0.262 Sum_probs=198.1
Q ss_pred HhccCcCceecccCCceEEEEEec-CC-ceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCc------cceEEeeeecCCc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DG-IEVAIKVFHQECARAMKSFEVECEVMKNIRHRN------LVKIISGCSNDDF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 545 (763)
.++|.+.+.||+|+||+||+|... ++ +.||+|+++... ...+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999764 44 689999997542 34567788999999997765 8999999999999
Q ss_pred eEEEEEccCCCChhhhhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe----------------
Q 046240 546 KALVLEYMPNGSLDIFLYS-STCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL---------------- 608 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll---------------- 608 (763)
.++||||+.+ ++.+++.. ....+++..+..++.|+++||+|| |+.+|+||||||+||++
T Consensus 97 ~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELLGK-NTFEFLKENNFQPYPLPHVRHMAYQLCHALRFL---HENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH---HTTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEeccCC-ChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEeccccccccccccccc
Confidence 9999999955 55555544 334689999999999999999999 78899999999999999
Q ss_pred ---cCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhh
Q 046240 609 ---DEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAEL 685 (763)
Q Consensus 609 ---~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~ 685 (763)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|..||........
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 56789999999999875322 2345789999999999999999999999999999999999999976433221
Q ss_pred -hhhhhhcccCChhHHH-----------------------HHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCC
Q 046240 686 -SLKHWVNGLLPVSLME-----------------------VVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRI 741 (763)
Q Consensus 686 -~~~~~~~~~~~~~~~~-----------------------~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp 741 (763)
.......+..|..... .+......... ...........+.+++.+||+.||++||
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKS-YMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGG-GCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccc-cccccchhHHHHHHHHHHHhcCChhhCc
Confidence 1111111112211110 01111000000 0000112245789999999999999999
Q ss_pred CHHHHHH
Q 046240 742 NAKCCNF 748 (763)
Q Consensus 742 s~~~v~~ 748 (763)
|+.|+++
T Consensus 327 t~~e~l~ 333 (355)
T 2eu9_A 327 TLAEALL 333 (355)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999974
No 251
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.7e-36 Score=322.53 Aligned_cols=256 Identities=19% Similarity=0.220 Sum_probs=174.0
Q ss_pred HhccCcCc-eecccCCceEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCccceEEeeeec----CCceE
Q 046240 474 TNRFGRDN-LIGIGSFGYVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNLVKIISGCSN----DDFKA 547 (763)
Q Consensus 474 ~~~~~~~~-~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 547 (763)
.++|.+.+ .||+|+||+||+|... +|+.||||++...... .......++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA----RQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH----HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH----HHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 57888854 6999999999999765 7899999999754211 1222334566799999999999875 44589
Q ss_pred EEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC---CCcEEEeeecCce
Q 046240 548 LVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE---DMIAHLSDFGIAK 623 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~ 623 (763)
+||||+++|+|.+++.... ..+++..+..++.|+++||.|| |+.+|+||||||+||+++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~L---H~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL---HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHH---HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999997654 3689999999999999999999 7789999999999999976 4569999999998
Q ss_pred ecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHH
Q 046240 624 LLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVV 703 (763)
Q Consensus 624 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 703 (763)
..... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||.......... .....+
T Consensus 180 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----------~~~~~~ 245 (336)
T 3fhr_A 180 ETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP----------GMKRRI 245 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred ecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----------hHHHhh
Confidence 76422 2234568999999999988899999999999999999999999997643221100 000000
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH--HHhhc
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF--VLCEQ 753 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~--~L~~~ 753 (763)
.......+... ...+...+.+++..|++.||++|||+.|+++ .+.+.
T Consensus 246 ~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 246 RLGQYGFPNPE---WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp -----CCCTTT---STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred hccccccCchh---hccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 00000001100 0123456889999999999999999999997 44443
No 252
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-35 Score=323.89 Aligned_cols=316 Identities=16% Similarity=0.143 Sum_probs=257.3
Q ss_pred CCCCCCCCCc----ccceeecC----------------CCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCC
Q 046240 57 NWTSNTSVCN----WIGITCDV----------------NSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGN 116 (763)
Q Consensus 57 ~w~~~~~~c~----w~gv~c~~----------------~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 116 (763)
+|..+.+||. |.++.|+. ...+++.|++++|.++...+..|..+++|++|+|++|.++
T Consensus 5 ~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~-- 82 (390)
T 3o6n_A 5 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-- 82 (390)
T ss_dssp --CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC--
T ss_pred CCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc--
Confidence 7887778875 54444431 1157889999999999655556899999999999999995
Q ss_pred CccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcc
Q 046240 117 NSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPL 196 (763)
Q Consensus 117 ~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l 196 (763)
.++...+..+++|++|+|++|.+++..|..|.++++|++|+|++|+++.+.+..|+++++|++|+ +++|.+
T Consensus 83 -----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~----L~~n~l 153 (390)
T 3o6n_A 83 -----EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS----MSNNNL 153 (390)
T ss_dssp -----EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE----CCSSCC
T ss_pred -----ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE----CCCCcc
Confidence 77777778999999999999999999899999999999999999999977777789999999999 889999
Q ss_pred cccCCcccccccccccEEEeecCccccccccccCCc----------------cccceeecccccccCCCCccccccCCCC
Q 046240 197 NGILPSSIVNLSISLERLYISNCSITGNIPQVMGNL----------------SIFLLLDLELNKLTGPIPVTFGRLQNSK 260 (763)
Q Consensus 197 ~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l----------------~~L~~L~L~~N~l~~~~p~~~~~l~~~~ 260 (763)
++..|..+.+++ +|++|++++|++++.....+..+ ++|+.|++++|.++.. |... . ++
T Consensus 154 ~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~-~~~~--~--~~ 227 (390)
T 3o6n_A 154 ERIEDDTFQATT-SLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV-RGPV--N--VE 227 (390)
T ss_dssp CBCCTTTTSSCT-TCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE-ECCC--C--SS
T ss_pred CccChhhccCCC-CCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeec-cccc--c--cc
Confidence 988888898888 99999999999996543333222 2345555555555522 2222 1 24
Q ss_pred ccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeC
Q 046240 261 LDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDL 340 (763)
Q Consensus 261 L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 340 (763)
|+.|++++|++++. + .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|
T Consensus 228 L~~L~l~~n~l~~~-~---~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 228 LTILKLQHNNLTDT-A---WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp CCEEECCSSCCCCC-G---GGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccEEECCCCCCccc-H---HHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 88999999999853 3 58899999999999999999999999999999999999999994 6777788999999999
Q ss_pred cCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCcccCCC
Q 046240 341 SNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 341 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~p 397 (763)
++|++++ +|..+..+++|+.|++++|+++... ...++.+..+++.+|++.|++.
T Consensus 303 ~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~~~ 356 (390)
T 3o6n_A 303 SHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNSL 356 (390)
T ss_dssp CSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHHH
T ss_pred CCCccee-cCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccchhH
Confidence 9999997 5667889999999999999998764 3457889999999999998753
No 253
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.5e-36 Score=320.58 Aligned_cols=242 Identities=21% Similarity=0.259 Sum_probs=198.2
Q ss_pred HHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHH------HHHHHHHHHHHHHhCC--CCccceEEeeeec
Q 046240 472 RATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECAR------AMKSFEVECEVMKNIR--HRNLVKIISGCSN 542 (763)
Q Consensus 472 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~~~~ 542 (763)
...++|.+.+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3457899999999999999999965 57899999999755321 2245667999999996 5999999999999
Q ss_pred CCceEEEEEccCC-CChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEec-CCCcEEEeeec
Q 046240 543 DDFKALVLEYMPN-GSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLD-EDMIAHLSDFG 620 (763)
Q Consensus 543 ~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~-~~~~~kl~Dfg 620 (763)
.+..++|+||+.+ ++|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||+++ +++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~L---H~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHC---HNCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999986 89999987643 588999999999999999999 788999999999999999 78999999999
Q ss_pred CceecCCCCCccccccccccccccCccccCCCCC-CcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhH
Q 046240 621 IAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKV-STRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSL 699 (763)
Q Consensus 621 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 699 (763)
+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 196 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---------------- 255 (320)
T 3a99_A 196 SGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI---------------- 255 (320)
T ss_dssp TCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH----------------
T ss_pred cccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh----------------
Confidence 99876432 2234568999999998876665 67899999999999999999999763211
Q ss_pred HHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 700 MEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 700 ~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
.......... +...+.+++.+||+.+|++||+++++++
T Consensus 256 ---~~~~~~~~~~--------~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 ---IRGQVFFRQR--------VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---HHCCCCCSSC--------CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---hccccccccc--------CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111111 2345789999999999999999999986
No 254
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=319.21 Aligned_cols=245 Identities=22% Similarity=0.321 Sum_probs=190.1
Q ss_pred HHHHHHhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhH------HHHHHHHHHHHHHHhC----CCCccceEE
Q 046240 469 DLSRATNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECA------RAMKSFEVECEVMKNI----RHRNLVKII 537 (763)
Q Consensus 469 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~l~ 537 (763)
+.....++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3445678899999999999999999966 4788999999965421 1223456789999998 899999999
Q ss_pred eeeecCCceEEEEEc-cCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEec-CCCcEE
Q 046240 538 SGCSNDDFKALVLEY-MPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLD-EDMIAH 615 (763)
Q Consensus 538 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~-~~~~~k 615 (763)
+++...+..++|+|| +.+++|.+++.... .+++..+..++.|+++||+|| |+.+|+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHC---HSRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH---HHHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999997644 589999999999999999999 677999999999999999 889999
Q ss_pred EeeecCceecCCCCCccccccccccccccCccccCCCCCC-cchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhccc
Q 046240 616 LSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVS-TRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGL 694 (763)
Q Consensus 616 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 694 (763)
|+|||+++...... .....|+..|+|||++.+..+. .++|||||||++|||++|+.||.....
T Consensus 181 l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------ 244 (312)
T 2iwi_A 181 LIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------------ 244 (312)
T ss_dssp ECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------------
T ss_pred EEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------------
Confidence 99999998765322 2345689999999988766664 589999999999999999999976321
Q ss_pred CChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 695 LPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 695 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
+......... .+...+.+++.+|++.+|++||++.|+++
T Consensus 245 -------~~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 -------ILEAELHFPA--------HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -------HHHTCCCCCT--------TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------HhhhccCCcc--------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111111 12345789999999999999999999987
No 255
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.6e-35 Score=315.00 Aligned_cols=279 Identities=18% Similarity=0.238 Sum_probs=179.5
Q ss_pred CChhhHHHHHHHHHhccCCCCcccccCC----CCCCCCCcccceeecC--------CCCceEEEEecCCCCCCcCCcccC
Q 046240 31 NITTDQQALLALEAHISYDPTNLLAQNW----TSNTSVCNWIGITCDV--------NSHRVTALNISSLNLQGEIPHEIG 98 (763)
Q Consensus 31 ~~~~~~~~l~~~~~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~~--------~~~~v~~L~L~~~~l~~~~~~~~~ 98 (763)
...+|..||++||+.+..||.+.+. +| ....++|.|.|+.|.. ...+|+.|+|++|+++ .+|+.++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~-~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHS-AWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHH-HHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhh-hhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 3568899999999998878887775 89 4567899999999952 3468899999999988 6788888
Q ss_pred CCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCC
Q 046240 99 YLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGN 178 (763)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 178 (763)
.+++|++|+|++|.++ .+|..+. .+++|++|+|++|.|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-------~lp~~~~-~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~ 172 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-------ELPDTMQ-QFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS 172 (328)
T ss_dssp GGTTCSEEEEESSCCC-------CCCSCGG-GGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEE
T ss_pred hCCCCCEEECCCCCcc-------chhHHHh-ccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhh
Confidence 8888888888888774 6666553 6777777777777777 56777777777777777777777666665443
Q ss_pred CCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCC
Q 046240 179 LRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQN 258 (763)
Q Consensus 179 l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 258 (763)
.. ++..+.++. +|++|+|++|+|+ .+|..++.+++|++|+|++|++++ +|..
T Consensus 173 ~~-------------------~~~~~~~l~-~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~------ 224 (328)
T 4fcg_A 173 TD-------------------ASGEHQGLV-NLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPA------ 224 (328)
T ss_dssp EC--------------------CCCEEEST-TCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGG------
T ss_pred cc-------------------chhhhccCC-CCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchh------
Confidence 11 112233343 5555666655555 445555555555555555555552 3333
Q ss_pred CCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEE
Q 046240 259 SKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEIL 338 (763)
Q Consensus 259 ~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 338 (763)
+..+++|++|+|++|++.+.+|..|+++++|+.|+|++|++.+.+|..+..+++|++|
T Consensus 225 ----------------------l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L 282 (328)
T 4fcg_A 225 ----------------------IHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKL 282 (328)
T ss_dssp ----------------------GGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEE
T ss_pred ----------------------hccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEE
Confidence 4444455555555555555555555555555555555555555555555555555555
Q ss_pred eCcCCccCCccchhhhhhccCceEEcccccCC
Q 046240 339 DLSNNKISGFILISLEKLLYLKKLNLSFNKLE 370 (763)
Q Consensus 339 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 370 (763)
+|++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 283 ~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 283 DLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred eCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 55555555555555555555555555555443
No 256
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.7e-35 Score=321.45 Aligned_cols=265 Identities=19% Similarity=0.241 Sum_probs=196.4
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-----------CCccceEEeeee
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVMKNIR-----------HRNLVKIISGCS 541 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~ 541 (763)
.++|.+.+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999976 578999999997543 23466788999998886 899999999987
Q ss_pred cCC----ceEEEEEccCCCChhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEeCCCCCCCEEec------
Q 046240 542 NDD----FKALVLEYMPNGSLDIFLYSS-TCMLDIFQRLNIMIDVASALEYLNFRHTT-PIIHCDLKSSNVLLD------ 609 (763)
Q Consensus 542 ~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~-~ivH~dlk~~NIll~------ 609 (763)
..+ ..++||||+ +++|.+++... ...+++..+..++.|++.||+|| |++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYM---HRRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH---HHTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHH---HhcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 88999998763 33589999999999999999999 666 999999999999994
Q ss_pred CCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhh-----h
Q 046240 610 EDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAA-----E 684 (763)
Q Consensus 610 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~-----~ 684 (763)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999876422 23356899999999999999999999999999999999999999753211 1
Q ss_pred hhhhhhh--cccCChhHHH---HHHhhcCC-----C-cc-----------ccHHHHHHHHHHHHHHHHHccccCcCCCCC
Q 046240 685 LSLKHWV--NGLLPVSLME---VVNKTLLS-----P-PE-----------KDFAAKEQCVLSIFSLAMECTMELPEKRIN 742 (763)
Q Consensus 685 ~~~~~~~--~~~~~~~~~~---~i~~~l~~-----~-~~-----------~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps 742 (763)
....... .+..|..... ........ . .. ............+.+++..|++.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111110 1111111000 00000000 0 00 000011234678899999999999999999
Q ss_pred HHHHHH
Q 046240 743 AKCCNF 748 (763)
Q Consensus 743 ~~~v~~ 748 (763)
++|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999986
No 257
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.5e-35 Score=331.01 Aligned_cols=285 Identities=22% Similarity=0.270 Sum_probs=245.2
Q ss_pred CCceEEEEecCCCCCCcC-CcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCc--c
Q 046240 76 SHRVTALNISSLNLQGEI-PHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSP--I 152 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~--~ 152 (763)
..+++.|+|++|.+.+.+ +..|.++++|++|+|++|.++ .+++..+.++++|++|+|++|.+++..|.. |
T Consensus 53 l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~-------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 125 (455)
T 3v47_A 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL-------QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFF 125 (455)
T ss_dssp CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTC-------EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTT
T ss_pred CccccEEECcCCcccceECcccccccccCCEEeCCCCccC-------ccChhhccCcccCCEEeCCCCCCCccccCcccc
Confidence 467888999988887555 557888899999999888885 455555568888888888888888755444 8
Q ss_pred cCCCCCCeeeecCcccccccccc-cCCCCchhhhhhhhhccCCcccccCCcccccc------------------------
Q 046240 153 TNASKLTILELGGNSFSGFIPNT-IGNLRNIEWLGLVIGLIGNPLNGILPSSIVNL------------------------ 207 (763)
Q Consensus 153 ~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l------------------------ 207 (763)
.++++|++|+|++|++++..|.. |.++++|++|+ +++|.+++..|..+..+
T Consensus 126 ~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~----L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~ 201 (455)
T 3v47_A 126 KPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLD----LTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG 201 (455)
T ss_dssp TTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEE----CTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTT
T ss_pred cCcccCCEEECCCCccCccCcccccCCCCcccEEe----CCCCcccccChhhhhccccccccccccccCcccccchhhcc
Confidence 88888888888888888877766 78888888888 77888888777766554
Q ss_pred ----------cccccEEEeecCccccccccccCC---------------------------------------cccccee
Q 046240 208 ----------SISLERLYISNCSITGNIPQVMGN---------------------------------------LSIFLLL 238 (763)
Q Consensus 208 ----------~~~L~~L~L~~N~l~~~~~~~~~~---------------------------------------l~~L~~L 238 (763)
+ +|++|+|++|++++..|..+.. .++|++|
T Consensus 202 ~~~~~~~~~~~-~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L 280 (455)
T 3v47_A 202 WEKCGNPFKNT-SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTC 280 (455)
T ss_dssp HHHHCCTTTTC-EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEE
T ss_pred ccccccccccc-eeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEE
Confidence 4 7999999999888766654432 2689999
Q ss_pred ecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccC
Q 046240 239 DLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPY 318 (763)
Q Consensus 239 ~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 318 (763)
++++|++++..|..+..+++ |++|+|++|++++..|. .+.++++|++|+|++|++++..|..|.++++|+.|+|++
T Consensus 281 ~l~~n~l~~~~~~~~~~l~~--L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 281 DLSKSKIFALLKSVFSHFTD--LEQLTLAQNEINKIDDN--AFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp ECCSSCCCEECTTTTTTCTT--CCEEECTTSCCCEECTT--TTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred EecCccccccchhhcccCCC--CCEEECCCCcccccChh--HhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 99999999999999999977 99999999999988887 799999999999999999998899999999999999999
Q ss_pred ccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC
Q 046240 319 NRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG 376 (763)
Q Consensus 319 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 376 (763)
|++++..|..|..+++|++|+|++|+|+++++..|..+++|+.|++++|++++.+|..
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9999888999999999999999999999988888999999999999999999999854
No 258
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.2e-35 Score=339.92 Aligned_cols=307 Identities=19% Similarity=0.224 Sum_probs=245.2
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
..+++|||++|+|+++.+.+|.++++|++|+|++|+|+ .+|+++|.++++|++|+|++|+|++..+..|.+++
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-------~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~ 124 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-------TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLS 124 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-------EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCT
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-------CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCC
Confidence 57999999999999888889999999999999999996 89999999999999999999999988888999999
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCccccc-CCcccccccccccEEEeecCccccccccccCCccc-
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGI-LPSSIVNLSISLERLYISNCSITGNIPQVMGNLSI- 234 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~-~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~- 234 (763)
+|++|+|++|+|+++.+..|+++++|++|+ +++|.+++. +|..+..+. +|++|+|++|+|++..+..|..+.+
T Consensus 125 ~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~----Ls~N~l~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~l~~L~~l 199 (635)
T 4g8a_A 125 SLQKLVAVETNLASLENFPIGHLKTLKELN----VAHNLIQSFKLPEYFSNLT-NLEHLDLSSNKIQSIYCTDLRVLHQM 199 (635)
T ss_dssp TCCEEECTTSCCCCSTTCCCTTCTTCCEEE----CCSSCCCCCCCCGGGGGCT-TCCEEECCSSCCCEECGGGGHHHHTC
T ss_pred CCCEEECCCCcCCCCChhhhhcCcccCeec----cccCccccCCCchhhccch-hhhhhcccCccccccccccccchhhh
Confidence 999999999999998888999999999999 889998764 577778887 9999999999887665544332221
Q ss_pred --------------------------------------------------------------------------------
Q 046240 235 -------------------------------------------------------------------------------- 234 (763)
Q Consensus 235 -------------------------------------------------------------------------------- 234 (763)
T Consensus 200 ~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 279 (635)
T 4g8a_A 200 PLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLC 279 (635)
T ss_dssp TTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGG
T ss_pred hhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccccccccc
Confidence
Q ss_pred --------------------------------------------------cceeecccccccCCCCccc-----------
Q 046240 235 --------------------------------------------------FLLLDLELNKLTGPIPVTF----------- 253 (763)
Q Consensus 235 --------------------------------------------------L~~L~L~~N~l~~~~p~~~----------- 253 (763)
|+.|++.+|.+.+..+..+
T Consensus 280 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n 359 (635)
T 4g8a_A 280 NLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSN 359 (635)
T ss_dssp GSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESC
T ss_pred chhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccc
Confidence 1222222222211100000
Q ss_pred --------cccCC-------------------------------------------------------------------
Q 046240 254 --------GRLQN------------------------------------------------------------------- 258 (763)
Q Consensus 254 --------~~l~~------------------------------------------------------------------- 258 (763)
..+++
T Consensus 360 ~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~ 439 (635)
T 4g8a_A 360 KGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFS 439 (635)
T ss_dssp CSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSC
T ss_pred cCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccc
Confidence 00111
Q ss_pred -----CCccEEEecCCccccCCCCccccccCCcccEEEcccccc-cccCCcccCCCcCccEEEccCccccCccccccccc
Q 046240 259 -----SKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNF-SGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYL 332 (763)
Q Consensus 259 -----~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 332 (763)
.+++.++++.|.+.+..|. .+..++.|+.|+|++|++ .+..|..|..+++|+.|+|++|+|++..|..|.++
T Consensus 440 ~~~~l~~l~~l~ls~n~l~~~~~~--~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l 517 (635)
T 4g8a_A 440 VFLSLRNLIYLDISHTHTRVAFNG--IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 517 (635)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTT--TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred cccccccccccccccccccccccc--ccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCC
Confidence 1133333344444433343 456677888888888874 44678899999999999999999999999999999
Q ss_pred ccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC-CCc-cccccccccCCCcccCCC
Q 046240 333 TSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG-GPF-ANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 333 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~-~~l~~~~~~~n~~~c~~p 397 (763)
++|++|+|++|+|+++.+..|..+++|++|+|++|+|++.+|.. ..+ ..++.+++.+|||.|+|.
T Consensus 518 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 518 SSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999999999999999999999999999998875 344 578999999999999986
No 259
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.3e-35 Score=338.89 Aligned_cols=316 Identities=16% Similarity=0.150 Sum_probs=260.1
Q ss_pred CCCCCCCCCc----ccceeecC----------------CCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCC
Q 046240 57 NWTSNTSVCN----WIGITCDV----------------NSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGN 116 (763)
Q Consensus 57 ~w~~~~~~c~----w~gv~c~~----------------~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 116 (763)
+|..+.+||. |.++.|+. ...+++.|++++|.+....+..|..+++|++|+|++|.++
T Consensus 11 ~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~-- 88 (597)
T 3oja_B 11 PRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-- 88 (597)
T ss_dssp CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCC--
T ss_pred CCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCC--
Confidence 7887777773 66655542 1146788999999998766667889999999999999985
Q ss_pred CccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcc
Q 046240 117 NSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPL 196 (763)
Q Consensus 117 ~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l 196 (763)
.+|+..|..+++|++|+|++|.|++..|..|+++++|++|+|++|+|+++.+..|+++++|++|+ +++|.+
T Consensus 89 -----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~----Ls~N~l 159 (597)
T 3oja_B 89 -----EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS----MSNNNL 159 (597)
T ss_dssp -----EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE----CCSSCC
T ss_pred -----CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE----eeCCcC
Confidence 67776777999999999999999998888999999999999999999988778889999999999 889999
Q ss_pred cccCCcccccccccccEEEeecCccccccccccCCc----------------cccceeecccccccCCCCccccccCCCC
Q 046240 197 NGILPSSIVNLSISLERLYISNCSITGNIPQVMGNL----------------SIFLLLDLELNKLTGPIPVTFGRLQNSK 260 (763)
Q Consensus 197 ~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l----------------~~L~~L~L~~N~l~~~~p~~~~~l~~~~ 260 (763)
++..|..+.+++ +|++|+|++|++++.....+.++ ++|+.|++++|.++.. |..+. ++
T Consensus 160 ~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~-~~~~~----~~ 233 (597)
T 3oja_B 160 ERIEDDTFQATT-SLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV-RGPVN----VE 233 (597)
T ss_dssp CBCCTTTTTTCT-TCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEE-ECSCC----SC
T ss_pred CCCChhhhhcCC-cCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCccccc-ccccC----CC
Confidence 998888899888 99999999999987643333221 2344455555555422 22221 24
Q ss_pred ccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeC
Q 046240 261 LDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDL 340 (763)
Q Consensus 261 L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 340 (763)
|+.|+|++|.+++. . .+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 234 L~~L~L~~n~l~~~--~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 308 (597)
T 3oja_B 234 LTILKLQHNNLTDT--A--WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 308 (597)
T ss_dssp CCEEECCSSCCCCC--G--GGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEEC
T ss_pred CCEEECCCCCCCCC--h--hhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEEC
Confidence 88999999999852 3 68899999999999999999999999999999999999999995 6777888999999999
Q ss_pred cCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCcccCCC
Q 046240 341 SNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 341 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~p 397 (763)
++|+++. +|..+..+++|+.|+|++|++++..+ ..++.+..+++.+|++.|.+.
T Consensus 309 s~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 309 SHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKL--STHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp CSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCC--CTTCCCSEEECCSSCEEHHHH
T ss_pred CCCCCCc-cCcccccCCCCCEEECCCCCCCCcCh--hhcCCCCEEEeeCCCCCChhH
Confidence 9999997 67778999999999999999997753 457889999999999998754
No 260
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.9e-35 Score=335.74 Aligned_cols=154 Identities=21% Similarity=0.241 Sum_probs=110.1
Q ss_pred CCcccceeecCC-----------CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCC
Q 046240 64 VCNWIGITCDVN-----------SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALP 132 (763)
Q Consensus 64 ~c~w~gv~c~~~-----------~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~ 132 (763)
.|.|.|+ |+.. ..++++|+|++|++++..|..|.++++|++|+|++|+++ .+++..|.+++
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-------~~~~~~~~~l~ 74 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-------TIEGDAFYSLG 74 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCC-------EECTTTTTTCT
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcC-------ccChhhccccc
Confidence 4888887 7642 247899999999999888888999999999999999885 55655566777
Q ss_pred CccEEEcccccccccCCCcccCCCCCCeeeecCcccccc-cccccCCCCchhhhhhhhhccCCcccccCC-ccccccccc
Q 046240 133 NVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGF-IPNTIGNLRNIEWLGLVIGLIGNPLNGILP-SSIVNLSIS 210 (763)
Q Consensus 133 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p-~~~~~l~~~ 210 (763)
+|++|+|++|+|++..|..|+++++|++|+|++|++++. .|..|+++++|++|+ +++|.+.+.+| ..+.+++ +
T Consensus 75 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~----L~~n~~~~~~~~~~~~~l~-~ 149 (549)
T 2z81_A 75 SLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR----IGNVETFSEIRRIDFAGLT-S 149 (549)
T ss_dssp TCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE----EEESSSCCEECTTTTTTCC-E
T ss_pred cCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE----CCCCccccccCHhhhhccc-c
Confidence 788888888877776666677777777777777777753 456677777777777 55666433333 4555555 6
Q ss_pred ccEEEeecCccccccccccC
Q 046240 211 LERLYISNCSITGNIPQVMG 230 (763)
Q Consensus 211 L~~L~L~~N~l~~~~~~~~~ 230 (763)
|++|++++|++++..|..++
T Consensus 150 L~~L~L~~n~l~~~~~~~l~ 169 (549)
T 2z81_A 150 LNELEIKALSLRNYQSQSLK 169 (549)
T ss_dssp EEEEEEEETTCCEECTTTTT
T ss_pred cCeeeccCCcccccChhhhh
Confidence 66666666666655555443
No 261
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.5e-35 Score=336.53 Aligned_cols=273 Identities=25% Similarity=0.315 Sum_probs=200.3
Q ss_pred HhccCcCceecccCCceEEEEEe-cCCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeec------CCc
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSN------DDF 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 545 (763)
.++|.+.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 37899999999999999999966 46899999998754 33456778999999999999999999998765 677
Q ss_pred eEEEEEccCCCChhhhhccCCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCc---EEEeeec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTC--MLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMI---AHLSDFG 620 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~---~kl~Dfg 620 (763)
.++||||+++|+|.+++..... .+++..+..++.+++.||+|| |+.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yL---Hs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL---HENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHH---HHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999976432 578889999999999999999 6789999999999999997664 9999999
Q ss_pred CceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHH
Q 046240 621 IAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLM 700 (763)
Q Consensus 621 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 700 (763)
.++...... ......|++.|+|||++.+..++.++|||||||++|||++|..||....... .|..........
T Consensus 170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~----~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV----QWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH----HSSTTCC-----
T ss_pred ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh----hhhhhhhcccch
Confidence 998764332 2234678999999999999999999999999999999999999997532211 111111000000
Q ss_pred HH-HHh----hcCCCc--cccHHHHHHHHHHHHHHHHHccccCcCCCCCHHH-----HHHHHhhcccc
Q 046240 701 EV-VNK----TLLSPP--EKDFAAKEQCVLSIFSLAMECTMELPEKRINAKC-----CNFVLCEQFVS 756 (763)
Q Consensus 701 ~~-i~~----~l~~~~--~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~-----v~~~L~~~~~~ 756 (763)
.. ... ...... .............+.+++..|+..||++|||+.+ ..+.+..++..
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00 000 000000 0000011124667899999999999999999987 34555544443
No 262
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-34 Score=330.26 Aligned_cols=143 Identities=18% Similarity=0.257 Sum_probs=124.5
Q ss_pred ccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCcccc-Ccccccccc
Q 046240 253 FGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLE-GPIPESFGY 331 (763)
Q Consensus 253 ~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~ 331 (763)
+..+++ |++|++++|.+.+..|.. .+..+++|++|++++|++++..|..|.++++|+.|++++|+++ +.+|..+..
T Consensus 392 ~~~l~~--L~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~ 468 (570)
T 2z63_A 392 FLGLEQ--LEHLDFQHSNLKQMSEFS-VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 468 (570)
T ss_dssp EETCTT--CCEEECTTSEEESCTTSC-TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred ccccCC--CCEEEccCCccccccchh-hhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhc
Confidence 555544 777777777777655521 5788999999999999999889999999999999999999998 578999999
Q ss_pred cccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC-CCccccccccccCCCcccCCCC
Q 046240 332 LTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG-GPFANFTAKSFMGNEKLCGLPH 398 (763)
Q Consensus 332 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~c~~p~ 398 (763)
+++|++|+|++|+++++.|..|..+++|+.|++++|++++.+|.. ..++.+..+++.+|++.|+||.
T Consensus 469 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999999999999988999999999999999999999988764 5678899999999999999884
No 263
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=346.50 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=59.9
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccc-cccccCCCccEEEcccccccccCC-Cccc
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPS-RIDLALPNVKALSLAYNRFSGTIQ-SPIT 153 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~-~~~~~l~~L~~L~L~~N~i~~~~p-~~~~ 153 (763)
..+++.|+|++|.|++..|..|+++++|++|+|++|.++ +.+|. ..+.++++|++|+|++|.+++..+ ..|+
T Consensus 72 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~------~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~ 145 (844)
T 3j0a_A 72 LPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLS------DAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG 145 (844)
T ss_dssp CTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCS------SCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG
T ss_pred CCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCC------cccccCccccccCCCCEEECCCCcccccccchhHh
Confidence 356777777777777777777777777777777777765 23332 234466666666666666665544 3566
Q ss_pred CCCCCCeeeecCccccccccccc
Q 046240 154 NASKLTILELGGNSFSGFIPNTI 176 (763)
Q Consensus 154 ~l~~L~~L~L~~N~l~~~~p~~~ 176 (763)
++++|++|+|++|++++..+..|
T Consensus 146 ~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 146 KLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp TCSSCCEEEEESSCCCCCCSGGG
T ss_pred hCCCCCEEECCCCcCCeeCHHHc
Confidence 66666666666666655444433
No 264
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.2e-34 Score=328.78 Aligned_cols=161 Identities=21% Similarity=0.247 Sum_probs=118.7
Q ss_pred CCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCC--CCccccccCCcccEEEcccccccccCC-cccC
Q 046240 230 GNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSI--PSCIDIGNLKVVVEINLSRNNFSGDIP-ATIG 306 (763)
Q Consensus 230 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~--p~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~ 306 (763)
..+++|++|++++|++++..|..+.++++ |++|+|++|++++.. |. .+.++++|++|++++|++++.+| ..+.
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 425 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKR--LQTLILQRNGLKNFFKVAL--MTKNMSSLETLDVSLNSLNSHAYDRTCA 425 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSS--CCEEECCSSCCCBTTHHHH--TTTTCTTCCEEECTTSCCBSCCSSCCCC
T ss_pred cCCCCceEEECCCCccccchhhhhcccCC--CCEEECCCCCcCCcccchh--hhcCCCCCCEEECCCCcCCCccChhhhc
Confidence 56677777777777777777777777765 777777777777422 23 46777777778888887776344 4477
Q ss_pred CCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCC-CCCccccccc
Q 046240 307 GLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPR-GGPFANFTAK 385 (763)
Q Consensus 307 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~l~~~ 385 (763)
.+++|+.|+|++|++++..|..+. ++|+.|+|++|+|+.+ |..+..+++|++|+|++|++++.++. ...++.+..+
T Consensus 426 ~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 502 (562)
T 3a79_B 426 WAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSI-PKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYI 502 (562)
T ss_dssp CCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCC-CTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCE
T ss_pred CcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCccc-ChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEE
Confidence 777788888888877766665544 6888888888888864 44444888999999999999865555 4567788888
Q ss_pred cccCCCcccCCC
Q 046240 386 SFMGNEKLCGLP 397 (763)
Q Consensus 386 ~~~~n~~~c~~p 397 (763)
++.+|++.|+|+
T Consensus 503 ~l~~N~~~c~c~ 514 (562)
T 3a79_B 503 WLHDNPWDCTCP 514 (562)
T ss_dssp ECCSCCBCCCHH
T ss_pred EecCCCcCCCcc
Confidence 899999988876
No 265
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.2e-34 Score=329.79 Aligned_cols=300 Identities=19% Similarity=0.164 Sum_probs=245.9
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|+|++|.|++..|..|+++++|++|+|++|.++ .+++..|.++++|++|+|++|++++..|..|.+++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 105 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIY-------WIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPK 105 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCC-------EECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCT
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccc-------eeChhhccCccccCeeeCCCCcccccChhhhcccc
Confidence 57999999999999888999999999999999999996 67667777999999999999999999999999999
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL 236 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 236 (763)
+|++|+|++|++++..|..|+++++|++|+ +++|.+++..+..+.++. +|++|+|++|++++..|..|+.+++|+
T Consensus 106 ~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~----L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~ 180 (606)
T 3t6q_A 106 ALKHLFFIQTGISSIDFIPLHNQKTLESLY----LGSNHISSIKLPKGFPTE-KLKVLDFQNNAIHYLSKEDMSSLQQAT 180 (606)
T ss_dssp TCCEEECTTSCCSCGGGSCCTTCTTCCEEE----CCSSCCCCCCCCTTCCCT-TCCEEECCSSCCCEECHHHHHTTTTCC
T ss_pred cccEeeccccCcccCCcchhccCCcccEEE----CCCCcccccCcccccCCc-ccCEEEcccCcccccChhhhhhhcccc
Confidence 999999999999998899999999999999 889999986656666677 999999999999988899999999999
Q ss_pred --eeecccccccCCCCcccccc-------------------------------------------------CCCCccEEE
Q 046240 237 --LLDLELNKLTGPIPVTFGRL-------------------------------------------------QNSKLDTLS 265 (763)
Q Consensus 237 --~L~L~~N~l~~~~p~~~~~l-------------------------------------------------~~~~L~~L~ 265 (763)
.|++++|++++..|..+... ...+|+.|+
T Consensus 181 ~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~ 260 (606)
T 3t6q_A 181 NLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESIN 260 (606)
T ss_dssp SEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEE
T ss_pred eeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEE
Confidence 88999999987776655321 001367777
Q ss_pred ecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCcc
Q 046240 266 LCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKI 345 (763)
Q Consensus 266 L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 345 (763)
+++|.+++..+. .+.++++|++|++++|+++ .+|..+.++++|++|++++|++++..|..+..+++|++|++++|.+
T Consensus 261 l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 337 (606)
T 3t6q_A 261 LQKHYFFNISSN--TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTK 337 (606)
T ss_dssp CTTCCCSSCCTT--TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSS
T ss_pred eecCccCccCHH--HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCc
Confidence 888888765555 5777888888888888887 6777788888888888888888877777777888888888888877
Q ss_pred CCcc-chhhhhhccCceEEcccccCCCCC--CC-CCCccccccccccCCC
Q 046240 346 SGFI-LISLEKLLYLKKLNLSFNKLEGEI--PR-GGPFANFTAKSFMGNE 391 (763)
Q Consensus 346 ~~~~-~~~~~~l~~L~~L~l~~N~l~~~~--p~-~~~~~~l~~~~~~~n~ 391 (763)
.+.. +..+..+++|++|++++|.+++.. |. ...++.++.+++.+|.
T Consensus 338 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 387 (606)
T 3t6q_A 338 RLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 387 (606)
T ss_dssp CCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCS
T ss_pred ccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCc
Confidence 7444 344777778888888888777654 32 3456667777777764
No 266
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.9e-34 Score=336.03 Aligned_cols=312 Identities=23% Similarity=0.230 Sum_probs=238.9
Q ss_pred ceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCC--cc----------------cc-----Ccc---ccccccC
Q 046240 78 RVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNN--SL----------------SG-----SLP---SRIDLAL 131 (763)
Q Consensus 78 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~----------------~~-----~lp---~~~~~~l 131 (763)
+++.|+|++|.+++..|..|+.+++|++|+|++|.+++.. .+ .+ .+| ...+..+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l 328 (680)
T 1ziw_A 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWL 328 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTC
T ss_pred CCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccC
Confidence 4777777777777777777777777777777777765310 00 00 122 2245567
Q ss_pred CCccEEEcccccccccCCCcccCCCCCCeeeecC----------------------------cccccccccccCCCCchh
Q 046240 132 PNVKALSLAYNRFSGTIQSPITNASKLTILELGG----------------------------NSFSGFIPNTIGNLRNIE 183 (763)
Q Consensus 132 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~----------------------------N~l~~~~p~~~~~l~~L~ 183 (763)
++|++|++++|.+++..+..|.++++|++|+|++ |+++++.|.+|.++++|+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 408 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCC
Confidence 7788888888888877777777766666665544 455556667777777777
Q ss_pred hhhhhhhccCCcccccCC-cccccccccccEEEeecCccccccccccCCccccceeeccccccc--CCCCccccccCCCC
Q 046240 184 WLGLVIGLIGNPLNGILP-SSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLT--GPIPVTFGRLQNSK 260 (763)
Q Consensus 184 ~L~L~~~l~~n~l~~~~p-~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~~~ 260 (763)
.|+ +++|.+++.+| ..+.++. +|++|++++|++++..+..|..+++|+.|++++|.++ +..|..|.++++
T Consensus 409 ~L~----L~~N~l~~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~-- 481 (680)
T 1ziw_A 409 VLD----LGLNEIGQELTGQEWRGLE-NIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN-- 481 (680)
T ss_dssp EEE----CCSSCCEEECCSGGGTTCT-TCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTT--
T ss_pred EEe----CCCCcCccccCcccccCcc-cccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCC--
Confidence 777 67777776665 4555665 7777777777777777777777888888888888776 467888888876
Q ss_pred ccEEEecCCccccCCCCccccccCCcccEEEcccccccccCC--------cccCCCcCccEEEccCccccCccccccccc
Q 046240 261 LDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIP--------ATIGGLKDVQNISLPYNRLEGPIPESFGYL 332 (763)
Q Consensus 261 L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 332 (763)
|+.|+|++|++++..|. .+.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|..+
T Consensus 482 L~~L~Ls~N~l~~i~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 482 LTILDLSNNNIANINDD--MLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp CCEEECCSSCCCCCCTT--TTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCEEECCCCCCCcCChh--hhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 99999999999976666 68899999999999999986522 237889999999999999996656679999
Q ss_pred ccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCC--CccccccccccCCCcccCCCC
Q 046240 333 TSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGG--PFANFTAKSFMGNEKLCGLPH 398 (763)
Q Consensus 333 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~--~~~~l~~~~~~~n~~~c~~p~ 398 (763)
++|+.|+|++|+|+++++..|..+++|+.|+|++|++++.+|... .++.+..+++.+|||.|+|+.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999999999888889999999999999999998777542 467889999999999999984
No 267
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.9e-35 Score=302.68 Aligned_cols=234 Identities=13% Similarity=0.044 Sum_probs=183.8
Q ss_pred HhccCcCceecccCCceEEEEEec-CCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEEE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD-DGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 549 (763)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999765 58999999997542 33457789999999999999999999999999999999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCC
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGED 629 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 629 (763)
|||+++++|.+++... ....+...++.|+++||+|| |+++|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~l---H~~givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAA---HRAGVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHH---HHTTCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHH---HHCCCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 9999999999999543 35557888999999999999 77899999999999999999999998443
Q ss_pred CccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCC
Q 046240 630 QSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLS 709 (763)
Q Consensus 630 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 709 (763)
|++ .++.++|||||||++|||+||+.||............ .. ....
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-~~-------------~~~~ 220 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-ER-------------DTAG 220 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-CB-------------CTTS
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-HH-------------Hhcc
Confidence 333 3688999999999999999999999864321100000 00 0000
Q ss_pred CccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 710 PPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 710 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
.+.........+...+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0000000111234568999999999999999 9999999999876553
No 268
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-34 Score=341.06 Aligned_cols=293 Identities=22% Similarity=0.227 Sum_probs=207.8
Q ss_pred CCcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEccccc
Q 046240 64 VCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNR 143 (763)
Q Consensus 64 ~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~ 143 (763)
.|.|..|.+ -+.++++|||++|.|++..|..|.++++|++|+|++|.+. +.+++..|.++++|++|+|++|.
T Consensus 13 ~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~------~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 13 FCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTP------LTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp CCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCC------CEECTTTTSSCTTCCEEECTTCC
T ss_pred CCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCc------cccCHHHhcCCCCCCEEECCCCc
Confidence 356777776 4578999999999999999999999999999999999654 58888888899999999999999
Q ss_pred ccccCCCcccCCCCCCeeeecCcccccccccc--cCCCCchhhhhhhhhccCCcccccCC-cccccccccccEEEeecCc
Q 046240 144 FSGTIQSPITNASKLTILELGGNSFSGFIPNT--IGNLRNIEWLGLVIGLIGNPLNGILP-SSIVNLSISLERLYISNCS 220 (763)
Q Consensus 144 i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~~l~~n~l~~~~p-~~~~~l~~~L~~L~L~~N~ 220 (763)
|++..|..|.++++|++|+|++|++++.+|.. |+++++|+.|+ +++|.+++..+ ..|.+++ +|++|+|++|.
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~----Ls~N~l~~~~~~~~~~~L~-~L~~L~Ls~N~ 159 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLD----LSKNQIRSLYLHPSFGKLN-SLKSIDFSSNQ 159 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEE----EESCCCCCCCCCGGGGTCS-SCCEEEEESSC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEE----CCCCcccccccchhHhhCC-CCCEEECCCCc
Confidence 99999999999999999999999999866655 99999999999 88999988765 5678888 99999999999
Q ss_pred cccccccccCCc--cccceeecccccccCCCCccccccCC----CCccEEEecCCc------------------------
Q 046240 221 ITGNIPQVMGNL--SIFLLLDLELNKLTGPIPVTFGRLQN----SKLDTLSLCGNS------------------------ 270 (763)
Q Consensus 221 l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~----~~L~~L~L~~N~------------------------ 270 (763)
+++..+..|..+ ++|+.|+|++|.+++..|..+..+.+ ..|+.|++++|.
T Consensus 160 i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~ 239 (844)
T 3j0a_A 160 IFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILA 239 (844)
T ss_dssp CCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECC
T ss_pred CCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecc
Confidence 998888888776 66777777777766655554433211 124555555554
Q ss_pred --------------------------------------cccCCCCccccccCCcccEEEcccccccccCCcccCCCcCcc
Q 046240 271 --------------------------------------FSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQ 312 (763)
Q Consensus 271 --------------------------------------l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 312 (763)
+.+..|. .+..+++|+.|+|++|++++..|..|.++++|+
T Consensus 240 ~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 317 (844)
T 3j0a_A 240 HHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR--VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQ 317 (844)
T ss_dssp SSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC--CSSSCCCCCEEEEESCCCCEECTTTTTTCSSCC
T ss_pred cccccccccccccCCCChhhhhccccCCccEEECCCCcccccChh--hhhcCCCCCEEECCCCcCCCCChHHhcCCCCCC
Confidence 4433333 344455555555555555544444555555555
Q ss_pred EEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCC
Q 046240 313 NISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEG 371 (763)
Q Consensus 313 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 371 (763)
.|+|++|++++..|..|..+++|+.|+|++|+++++.+..|..+++|+.|+|++|.+++
T Consensus 318 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 318 VLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 55555555554444455555555555555555555444445555555555555555543
No 269
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-34 Score=339.33 Aligned_cols=239 Identities=23% Similarity=0.289 Sum_probs=191.7
Q ss_pred HhccCcCceecccCCceEEEEEec--CCceEEEEEeehh-hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCc-----
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELD--DGIEVAIKVFHQE-CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDF----- 545 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 545 (763)
.++|.+.+.||+|+||.||+|... +|+.||||++... .......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999765 6899999998643 23445678899999999999999999999987665
Q ss_pred eEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 546 KALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 546 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
.|+||||+++++|.+++.. .+++..+..++.|+++||.|| |+++|+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~l---H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYL---HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHH---HHCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999987754 589999999999999999999 67899999999999999986 8999999999876
Q ss_pred CCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHh
Q 046240 626 SGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNK 705 (763)
Q Consensus 626 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 705 (763)
... ....||+.|+|||++.+.. +.++|||||||++|||++|..|+....... .+
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------~~--------- 285 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG----------LP--------- 285 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS----------CC---------
T ss_pred ccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc----------cc---------
Confidence 432 3456899999999886554 889999999999999999998876522110 00
Q ss_pred hcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCC-HHHHHHHHhhc
Q 046240 706 TLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRIN-AKCCNFVLCEQ 753 (763)
Q Consensus 706 ~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps-~~~v~~~L~~~ 753 (763)
.... .......+.+++.+|++.||++||+ ++++.+.+...
T Consensus 286 ------~~~~--~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 286 ------EDDP--VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp ------TTCH--HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------cccc--ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0000 0112356889999999999999995 56666665544
No 270
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-34 Score=325.05 Aligned_cols=298 Identities=23% Similarity=0.271 Sum_probs=184.6
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccc-cCCCcccC
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSG-TIQSPITN 154 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~-~~p~~~~~ 154 (763)
..++++|+|++|++++..|..|+++++|++|+|++|+++ .+|.. .+++|++|+|++|.|++ .+|..|++
T Consensus 44 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-------~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~ 113 (520)
T 2z7x_B 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-------KISCH---PTVNLKHLDLSFNAFDALPICKEFGN 113 (520)
T ss_dssp CTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-------EEECC---CCCCCSEEECCSSCCSSCCCCGGGGG
T ss_pred cccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-------ecCcc---ccCCccEEeccCCccccccchhhhcc
Confidence 356677777777777666667777777777777777664 55554 56677777777777765 35666777
Q ss_pred CCCCCeeeecCcccccccccccCCCCch--hhhhhhhhccCCcc--cccCCccccccc----------------------
Q 046240 155 ASKLTILELGGNSFSGFIPNTIGNLRNI--EWLGLVIGLIGNPL--NGILPSSIVNLS---------------------- 208 (763)
Q Consensus 155 l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~~l~~n~l--~~~~p~~~~~l~---------------------- 208 (763)
+++|++|+|++|+|++ ..|.++++| +.|+ +++|.+ .+..|..+..+.
T Consensus 114 l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~----l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~ 186 (520)
T 2z7x_B 114 MSQLKFLGLSTTHLEK---SSVLPIAHLNISKVL----LVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSV 186 (520)
T ss_dssp CTTCCEEEEEESSCCG---GGGGGGTTSCEEEEE----EEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCC
T ss_pred CCcceEEEecCcccch---hhccccccceeeEEE----eecccccccccccccccccccceEEEEeccCcchhhhhhhhh
Confidence 7777777777776653 233444444 4444 444444 334444333311
Q ss_pred ------------------------------------------------------------ccccEEEeecCccccccccc
Q 046240 209 ------------------------------------------------------------ISLERLYISNCSITGNIPQV 228 (763)
Q Consensus 209 ------------------------------------------------------------~~L~~L~L~~N~l~~~~~~~ 228 (763)
++|++|++++|++++.+|..
T Consensus 187 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~ 266 (520)
T 2z7x_B 187 KTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFR 266 (520)
T ss_dssp TTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCC
T ss_pred hcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccc
Confidence 14555566666665555554
Q ss_pred c-----------------------------------------------------CCccccceeecccccccCCCCccccc
Q 046240 229 M-----------------------------------------------------GNLSIFLLLDLELNKLTGPIPVTFGR 255 (763)
Q Consensus 229 ~-----------------------------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~ 255 (763)
+ ..+++|++|++++|++++.+|..+..
T Consensus 267 ~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 346 (520)
T 2z7x_B 267 DFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGH 346 (520)
T ss_dssp CCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCC
T ss_pred hhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhcc
Confidence 4 45556666666666666556666666
Q ss_pred cCCCCccEEEecCCcccc--CCCCccccccCCcccEEEcccccccccCCc-ccCCCcCccEEEccCccccCccccccccc
Q 046240 256 LQNSKLDTLSLCGNSFSG--SIPSCIDIGNLKVVVEINLSRNNFSGDIPA-TIGGLKDVQNISLPYNRLEGPIPESFGYL 332 (763)
Q Consensus 256 l~~~~L~~L~L~~N~l~~--~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 332 (763)
+++ |++|+|++|++++ .+|. .+..+++|++|++++|++++.+|. .+..+++|+.|++++|++++..|..+.
T Consensus 347 l~~--L~~L~L~~N~l~~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-- 420 (520)
T 2z7x_B 347 LTE--LETLILQMNQLKELSKIAE--MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-- 420 (520)
T ss_dssp CSS--CCEEECCSSCCCBHHHHHH--HHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--
T ss_pred CCC--CCEEEccCCccCccccchH--HHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--
Confidence 654 6666666666664 2333 455666666666666666653443 356666666666666666655555443
Q ss_pred ccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCC-CCCccccccccccCCCcccCCC
Q 046240 333 TSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPR-GGPFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 333 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~l~~~~~~~n~~~c~~p 397 (763)
++|+.|+|++|+|+. +|..+..+++|++|++++|+++..++. ...++.+..+++.+|++.|+|+
T Consensus 421 ~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 421 PRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp TTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCEEECCCCcccc-cchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 677777777777774 455555788888888888888865444 3456777788888888887765
No 271
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.6e-34 Score=332.17 Aligned_cols=296 Identities=17% Similarity=0.273 Sum_probs=185.8
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCc-ccCCCcccc-Cccccccc-----cCCCccEEEcccccccccC
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNS-LVGNNSLSG-SLPSRIDL-----ALPNVKALSLAYNRFSGTI 148 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~-~lp~~~~~-----~l~~L~~L~L~~N~i~~~~ 148 (763)
..++++|+|++|++.+.+|+.|+++++|++|+|++|+ ++ | .+|..++. .+++|++|+|++|+++ .+
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~------~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~i 320 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGIS------GEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TF 320 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSC------HHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SC
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCc------cccchHHHHhhhccccCCCCCEEECCCCcCC-cc
Confidence 4689999999999999999999999999999999998 75 5 56766541 2377777777777777 66
Q ss_pred CC--cccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCccccccccc-ccEEEeecCcccccc
Q 046240 149 QS--PITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSIS-LERLYISNCSITGNI 225 (763)
Q Consensus 149 p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~-L~~L~L~~N~l~~~~ 225 (763)
|. .|+++++|++|+|++|+++|.+| .|+++++|+.|+ +++|+++ .+|..+.++. + |++|+|++|+++ .+
T Consensus 321 p~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~----L~~N~l~-~lp~~l~~l~-~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 321 PVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN----LAYNQIT-EIPANFCGFT-EQVENLSFAHNKLK-YI 392 (636)
T ss_dssp CCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE----CCSSEEE-ECCTTSEEEC-TTCCEEECCSSCCS-SC
T ss_pred CchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE----CCCCccc-cccHhhhhhc-ccCcEEEccCCcCc-cc
Confidence 66 77777777777777777777777 777777777777 6677776 6666677766 5 777777777776 55
Q ss_pred ccccCCcc--ccceeecccccccCCCCcccc-------ccCCCCccEEEecCCccccCCCCccccccCC-----------
Q 046240 226 PQVMGNLS--IFLLLDLELNKLTGPIPVTFG-------RLQNSKLDTLSLCGNSFSGSIPSCIDIGNLK----------- 285 (763)
Q Consensus 226 ~~~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~----------- 285 (763)
|..+..++ +|++|++++|++++.+|..+. .+.+ |++|+|++|+++ .+|.. .+..++
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~--L~~L~Ls~N~l~-~lp~~-~~~~l~~L~~L~Ls~N~ 468 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGIN--VSSINLSNNQIS-KFPKE-LFSTGSPLSSINLMGNM 468 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCC--EEEEECCSSCCC-SCCTH-HHHTTCCCSEEECCSSC
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCC--CCEEECcCCccC-cCCHH-HHccCCCCCEEECCCCC
Confidence 66655543 666666666666666665555 3333 555555555555 33331 123344
Q ss_pred --------------------cccEEEcccccccccCCcccC--CCcCccEEEccCccccCcccccccccccccEEeC---
Q 046240 286 --------------------VVVEINLSRNNFSGDIPATIG--GLKDVQNISLPYNRLEGPIPESFGYLTSLEILDL--- 340 (763)
Q Consensus 286 --------------------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L--- 340 (763)
+|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 469 l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 469 LTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp CSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred CCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 4555555555555 3444443 55555555555555553 4445555555555555
Q ss_pred ---cCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCccc
Q 046240 341 ---SNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLC 394 (763)
Q Consensus 341 ---~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c 394 (763)
++|++.+.+|..+..+++|+.|+|++|++ +.+|... .+.+..+++.+|++.|
T Consensus 547 ~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNIS 601 (636)
T ss_dssp BCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCE
T ss_pred cccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcCCCCcc
Confidence 33444555555555555555555555555 3333321 1445555555555444
No 272
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.9e-34 Score=299.95 Aligned_cols=229 Identities=19% Similarity=0.244 Sum_probs=177.3
Q ss_pred hccCcC-ceecccCCceEEEEEe-cCCceEEEEEeehhhHHHHHHHHHHHHHH-HhCCCCccceEEeeeec----CCceE
Q 046240 475 NRFGRD-NLIGIGSFGYVYKAEL-DDGIEVAIKVFHQECARAMKSFEVECEVM-KNIRHRNLVKIISGCSN----DDFKA 547 (763)
Q Consensus 475 ~~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~ 547 (763)
++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 556666 7899999999999966 57899999998643 3456788887 55689999999999876 66789
Q ss_pred EEEEccCCCChhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecC---CCcEEEeeecCce
Q 046240 548 LVLEYMPNGSLDIFLYSST-CMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDE---DMIAHLSDFGIAK 623 (763)
Q Consensus 548 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~ 623 (763)
+||||+++|+|.+++.... ..+++..+..++.|++.||.|| |+.+|+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL---HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH---HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999997653 3689999999999999999999 7789999999999999998 7899999999987
Q ss_pred ecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHH
Q 046240 624 LLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVV 703 (763)
Q Consensus 624 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i 703 (763)
... +..++.++|||||||++|||++|+.||............ ..
T Consensus 169 ~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~-~~----------- 212 (299)
T 3m2w_A 169 ETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-KT----------- 212 (299)
T ss_dssp ECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS-CC-----------
T ss_pred ccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH-HH-----------
Confidence 642 234677999999999999999999999764322110000 00
Q ss_pred HhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHHH
Q 046240 704 NKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCNF 748 (763)
Q Consensus 704 ~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~~ 748 (763)
................+...+.+++..|++.||++||++.|+++
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 213 -RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp -SSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000011111111223567899999999999999999999986
No 273
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.3e-34 Score=307.84 Aligned_cols=242 Identities=19% Similarity=0.156 Sum_probs=183.7
Q ss_pred HhccCcCceecccCCceEEEEEecCCceEEEEEeehhh--------HHHHHHHHHHHHHHHhCC---------CCccceE
Q 046240 474 TNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQEC--------ARAMKSFEVECEVMKNIR---------HRNLVKI 536 (763)
Q Consensus 474 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~l 536 (763)
.++|.+.+.||+|+||+||+|.. +|+.||||++.... ....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999987 68999999997542 112367888999998886 6565555
Q ss_pred Eee-----------------eec-------------CCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 046240 537 ISG-----------------CSN-------------DDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALE 586 (763)
Q Consensus 537 ~~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~ 586 (763)
.+. +.. .+..++||||+++|++.+.+.. ..+++..+..++.|++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 433 6789999999999976666543 35789999999999999999
Q ss_pred HHHhcC-CCCeEeCCCCCCCEEecCCC--------------------cEEEeeecCceecCCCCCccccccccccccccC
Q 046240 587 YLNFRH-TTPIIHCDLKSSNVLLDEDM--------------------IAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMA 645 (763)
Q Consensus 587 ~Lh~~h-~~~ivH~dlk~~NIll~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~a 645 (763)
|| | +.+|+||||||+|||++.++ .+||+|||+|+.... ....||+.|+|
T Consensus 176 ~l---H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~a 245 (336)
T 2vuw_A 176 VA---EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMD 245 (336)
T ss_dssp HH---HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTC
T ss_pred HH---HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccC
Confidence 99 6 78999999999999999887 899999999987642 13478999999
Q ss_pred ccccCCCCCCcchhHHHHHHH-HHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHH
Q 046240 646 PEYGIERKVSTRSDIYSYGIM-LIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLS 724 (763)
Q Consensus 646 PE~~~~~~~~~~~Dv~slGv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 724 (763)
||++.+.. +.++||||+|++ .+++++|..||....... ...+.+....................+
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLH-------------YLTDKMLKQMTFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHH-------------HHHHHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhh-------------HHHHhhhhhhccCcccchhhhhhcCHH
Confidence 99988766 889999998777 788899999986521100 001111111111222222334456778
Q ss_pred HHHHHHHccccCcCCCCCHHHHH
Q 046240 725 IFSLAMECTMELPEKRINAKCCN 747 (763)
Q Consensus 725 l~~l~~~cl~~~P~~Rps~~~v~ 747 (763)
+.+++.+|++.| |++|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 999999999976 888887
No 274
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-34 Score=314.96 Aligned_cols=238 Identities=16% Similarity=0.121 Sum_probs=177.5
Q ss_pred hccCcCceecccCCceEEEEEe-cCCceEEEEEeehhh---HHHHHHHHHHHHHHHhCCC-CccceEE------------
Q 046240 475 NRFGRDNLIGIGSFGYVYKAEL-DDGIEVAIKVFHQEC---ARAMKSFEVECEVMKNIRH-RNLVKII------------ 537 (763)
Q Consensus 475 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~l~------------ 537 (763)
.+|...+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+.+++.++| +|.....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4577889999999999999974 579999999987332 2336778899999999977 3221111
Q ss_pred ---------eeeec-----CCceEEEEEccCCCChhhhhc------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 046240 538 ---------SGCSN-----DDFKALVLEYMPNGSLDIFLY------SSTCMLDIFQRLNIMIDVASALEYLNFRHTTPII 597 (763)
Q Consensus 538 ---------~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~iv 597 (763)
.++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+|| |+++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L---H~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL---HHYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHH---HHTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHH---HhCCcc
Confidence 11111 12356677765 678988884 2233577888999999999999999 788999
Q ss_pred eCCCCCCCEEecCCCcEEEeeecCceecCCCCCccccccccccccccCcccc----------CCCCCCcchhHHHHHHHH
Q 046240 598 HCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYG----------IERKVSTRSDIYSYGIML 667 (763)
Q Consensus 598 H~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~slGv~l 667 (763)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999999875321 334567 999999998 666788999999999999
Q ss_pred HHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccccHHHHHHHHHHHHHHHHHccccCcCCCCCHHHHH
Q 046240 668 IETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDFAAKEQCVLSIFSLAMECTMELPEKRINAKCCN 747 (763)
Q Consensus 668 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rps~~~v~ 747 (763)
|||++|+.||......... ...+...+. ++..+.+++..||+.||++||++.+++
T Consensus 308 ~elltg~~Pf~~~~~~~~~-----------------~~~~~~~~~--------~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGS-----------------EWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCS-----------------GGGGSSCCC--------CCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhhH-----------------HHHHhhccc--------CCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999999999764322110 001111111 134588999999999999999987774
No 275
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.1e-32 Score=323.61 Aligned_cols=301 Identities=23% Similarity=0.246 Sum_probs=254.7
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.++++|+|++|++++..+..|+++++|++|+|++|.++ .+++..+.++++|++|+|++|.|+++.+..|.+++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-------~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~ 97 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS-------KLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCT 97 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCC-------CCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccC-------ccCHHHHhcccCcCEEECCCCccCccChhhhccCC
Confidence 58999999999999888888999999999999999996 66667777999999999999999987777899999
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccC--Cccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMG--NLSI 234 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~--~l~~ 234 (763)
+|++|+|++|+++++.|..|+++++|++|+ +++|.+++..|..+.++. +|++|+|++|++++..+..+. .+++
T Consensus 98 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~----Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~~~~~ 172 (680)
T 1ziw_A 98 NLTELHLMSNSIQKIKNNPFVKQKNLITLD----LSHNGLSSTKLGTQVQLE-NLQELLLSNNKIQALKSEELDIFANSS 172 (680)
T ss_dssp TCSEEECCSSCCCCCCSCTTTTCTTCCEEE----CCSSCCSCCCCCSSSCCT-TCCEEECCSSCCCCBCHHHHGGGTTCE
T ss_pred CCCEEECCCCccCccChhHccccCCCCEEE----CCCCcccccCchhhcccc-cCCEEEccCCcccccCHHHhhcccccc
Confidence 999999999999988889999999999999 889999999999998888 999999999999988877665 4589
Q ss_pred cceeecccccccCCCCccccccCC-------------------------CCccEEEecCCccccCCCCccccccCCc--c
Q 046240 235 FLLLDLELNKLTGPIPVTFGRLQN-------------------------SKLDTLSLCGNSFSGSIPSCIDIGNLKV--V 287 (763)
Q Consensus 235 L~~L~L~~N~l~~~~p~~~~~l~~-------------------------~~L~~L~L~~N~l~~~~p~~~~~~~l~~--L 287 (763)
|++|++++|++++..|..+..+.+ .+|+.|++++|.+++..|. .+.+++. |
T Consensus 173 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~--~~~~l~~~~L 250 (680)
T 1ziw_A 173 LKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT--TFLGLKWTNL 250 (680)
T ss_dssp ESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT--TTGGGGGSCC
T ss_pred ccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChh--HhhccCcCCC
Confidence 999999999999888877765432 3478888888888877777 6777755 9
Q ss_pred cEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCC---------ccchhhhhhcc
Q 046240 288 VEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISG---------FILISLEKLLY 358 (763)
Q Consensus 288 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~---------~~~~~~~~l~~ 358 (763)
++|+|++|++++..|..|+.+++|+.|+|++|++++..|..|..+++|+.|++++|...+ +....|..+++
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~ 330 (680)
T 1ziw_A 251 TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 330 (680)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTT
T ss_pred CEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCC
Confidence 999999999988888889999999999999999988888888888888888888875442 12236778888
Q ss_pred CceEEcccccCCCCCCCC-CCccccccccccCCC
Q 046240 359 LKKLNLSFNKLEGEIPRG-GPFANFTAKSFMGNE 391 (763)
Q Consensus 359 L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~ 391 (763)
|+.|++++|++++.+|.. ..++.+..+++.+|.
T Consensus 331 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 364 (680)
T 1ziw_A 331 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSF 364 (680)
T ss_dssp CCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCB
T ss_pred CCEEECCCCccCCCChhHhccccCCcEEECCCCc
Confidence 888888888888876653 456677777777764
No 276
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.9e-33 Score=313.90 Aligned_cols=138 Identities=22% Similarity=0.287 Sum_probs=119.8
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.++++|+|++|.+++..|..|.++++|++|+|++|+++ .+++..|.++++|++|+|++|+|++ +|.. .++
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~-------~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~ 90 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQ-------YLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTV 90 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCC-------EEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccC-------CcChHHhhcccCCCEEecCCCceee-cCcc--ccC
Confidence 68999999999999888889999999999999999996 6666667799999999999999995 5554 899
Q ss_pred CCCeeeecCccccc-ccccccCCCCchhhhhhhhhccCCcccccCCcccccccccc--cEEEeecCcc--ccccccccCC
Q 046240 157 KLTILELGGNSFSG-FIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISL--ERLYISNCSI--TGNIPQVMGN 231 (763)
Q Consensus 157 ~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L--~~L~L~~N~l--~~~~~~~~~~ 231 (763)
+|++|+|++|+|++ .+|..|+++++|++|+ +++|.+++ ..+..+. +| ++|+|++|++ .+..|..|..
T Consensus 91 ~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~----L~~n~l~~---~~~~~l~-~L~L~~L~l~~n~l~~~~~~~~~l~~ 162 (520)
T 2z7x_B 91 NLKHLDLSFNAFDALPICKEFGNMSQLKFLG----LSTTHLEK---SSVLPIA-HLNISKVLLVLGETYGEKEDPEGLQD 162 (520)
T ss_dssp CCSEEECCSSCCSSCCCCGGGGGCTTCCEEE----EEESSCCG---GGGGGGT-TSCEEEEEEEECTTTTSSCCTTTTTT
T ss_pred CccEEeccCCccccccchhhhccCCcceEEE----ecCcccch---hhccccc-cceeeEEEeecccccccccccccccc
Confidence 99999999999997 4789999999999999 88999886 4566666 77 9999999999 6777776666
Q ss_pred c
Q 046240 232 L 232 (763)
Q Consensus 232 l 232 (763)
+
T Consensus 163 l 163 (520)
T 2z7x_B 163 F 163 (520)
T ss_dssp C
T ss_pred c
Confidence 3
No 277
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.1e-32 Score=291.76 Aligned_cols=268 Identities=18% Similarity=0.240 Sum_probs=193.6
Q ss_pred ceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCC
Q 046240 78 RVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASK 157 (763)
Q Consensus 78 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~ 157 (763)
+++.+++++++++ .+|..+. ++|++|+|++|.++ .++...+.++++|++|+|++|.|++..|..|.++++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~-------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-------EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVK 101 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCC-------CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTT
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCC-------EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCC
Confidence 3566777777777 4665554 67888888888885 666666678888888888888888777888888888
Q ss_pred CCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCcccc--ccccccCCcccc
Q 046240 158 LTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITG--NIPQVMGNLSIF 235 (763)
Q Consensus 158 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~--~~~~~~~~l~~L 235 (763)
|++|+|++|+++. +|..+. ++|++|+ +++|.+++..+..+.++. +|++|++++|+++. ..+..|.++++|
T Consensus 102 L~~L~Ls~n~l~~-l~~~~~--~~L~~L~----l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l~~L 173 (330)
T 1xku_A 102 LERLYLSKNQLKE-LPEKMP--KTLQELR----VHENEITKVRKSVFNGLN-QMIVVELGTNPLKSSGIENGAFQGMKKL 173 (330)
T ss_dssp CCEEECCSSCCSB-CCSSCC--TTCCEEE----CCSSCCCBBCHHHHTTCT-TCCEEECCSSCCCGGGBCTTGGGGCTTC
T ss_pred CCEEECCCCcCCc-cChhhc--ccccEEE----CCCCcccccCHhHhcCCc-cccEEECCCCcCCccCcChhhccCCCCc
Confidence 8888888888874 444333 5666666 677777766666666666 77777777777753 566677777777
Q ss_pred ceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEE
Q 046240 236 LLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNIS 315 (763)
Q Consensus 236 ~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 315 (763)
++|++++|+++ .+|..+. + +|++|++++|++++..|. .+.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 174 ~~L~l~~n~l~-~l~~~~~--~--~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 246 (330)
T 1xku_A 174 SYIRIADTNIT-TIPQGLP--P--SLTELHLDGNKITKVDAA--SLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246 (330)
T ss_dssp CEEECCSSCCC-SCCSSCC--T--TCSEEECTTSCCCEECTG--GGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred CEEECCCCccc-cCCcccc--c--cCCEEECCCCcCCccCHH--HhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEE
Confidence 77777777777 3454443 2 377777777777766565 677777777777777777776666777777777777
Q ss_pred ccCccccCcccccccccccccEEeCcCCccCCccchhhhhh------ccCceEEcccccCCC
Q 046240 316 LPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKL------LYLKKLNLSFNKLEG 371 (763)
Q Consensus 316 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~l~~N~l~~ 371 (763)
|++|+++ .+|..+..+++|++|+|++|+|+++.+..|... ..|+.|++++|++..
T Consensus 247 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 247 LNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 7777777 566677777777777777777777766666432 567777777777753
No 278
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.1e-32 Score=313.71 Aligned_cols=296 Identities=20% Similarity=0.261 Sum_probs=226.2
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.++++|+|++|.|++..|..|+++++|++|+|++|.++ .+++..|.++++|++|+|++|+|+ .+|.. .++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-------~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~ 121 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-------SLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMA 121 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCC-------EECTTTTTTCTTCCEEECTTSCCC-EECSC--CCT
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCC-------cCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccc
Confidence 57899999999999877788999999999999999885 676667778999999999999998 45554 788
Q ss_pred CCCeeeecCcccccc-cccccCCCCchhhhhhhhhccCCcccccCCcccccccccc--cEEEeecCcc--ccccccccCC
Q 046240 157 KLTILELGGNSFSGF-IPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISL--ERLYISNCSI--TGNIPQVMGN 231 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L--~~L~L~~N~l--~~~~~~~~~~ 231 (763)
+|++|+|++|+|++. +|..|+++++|++|+ +++|++++. .+.++. +| ++|+|++|++ ++..|..|..
T Consensus 122 ~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~----L~~n~l~~~---~~~~l~-~L~L~~L~L~~n~l~~~~~~~~~l~~ 193 (562)
T 3a79_B 122 SLRHLDLSFNDFDVLPVCKEFGNLTKLTFLG----LSAAKFRQL---DLLPVA-HLHLSCILLDLVSYHIKGGETESLQI 193 (562)
T ss_dssp TCSEEECCSSCCSBCCCCGGGGGCTTCCEEE----EECSBCCTT---TTGGGT-TSCEEEEEEEESSCCCCSSSCCEEEE
T ss_pred cCCEEECCCCCccccCchHhhcccCcccEEe----cCCCccccC---chhhhh-hceeeEEEeecccccccccCcccccc
Confidence 999999999999874 468899999999988 778888753 344444 55 8888888887 6666655554
Q ss_pred cc------------------------------------------------------------------------------
Q 046240 232 LS------------------------------------------------------------------------------ 233 (763)
Q Consensus 232 l~------------------------------------------------------------------------------ 233 (763)
+.
T Consensus 194 l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~ 273 (562)
T 3a79_B 194 PNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF 273 (562)
T ss_dssp CCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH
T ss_pred cCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhh
Confidence 33
Q ss_pred ---ccceeecccccccCCCCccc-----------------------------------------------------cccC
Q 046240 234 ---IFLLLDLELNKLTGPIPVTF-----------------------------------------------------GRLQ 257 (763)
Q Consensus 234 ---~L~~L~L~~N~l~~~~p~~~-----------------------------------------------------~~l~ 257 (763)
+|++|++++|+++|.+|..+ ..++
T Consensus 274 ~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~ 353 (562)
T 3a79_B 274 WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPS 353 (562)
T ss_dssp TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred hcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCC
Confidence 67777777777777777654 3443
Q ss_pred CCCccEEEecCCccccCCCCccccccCCcccEEEccccccccc--CCcccCCCcCccEEEccCccccCccc-cccccccc
Q 046240 258 NSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGD--IPATIGGLKDVQNISLPYNRLEGPIP-ESFGYLTS 334 (763)
Q Consensus 258 ~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~ 334 (763)
+ |++|++++|++++.+|. .+.++++|++|+|++|++++. +|..|.++++|+.|+|++|++++.+| ..+..+++
T Consensus 354 ~--L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 354 S--FTFLNFTQNVFTDSVFQ--GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp C--CCEEECCSSCCCTTTTT--TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred C--ceEEECCCCccccchhh--hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 3 88888888888877777 678888888888888888863 34667888888888888888887344 45778888
Q ss_pred ccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCcccCCC
Q 046240 335 LEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 335 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~p 397 (763)
|++|+|++|++++..|..+. ++|+.|+|++|+++..++....++.+..+++.+|... ..|
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~ 489 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVP 489 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCC-CCC
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCC-CCC
Confidence 88888888888776555443 6888888888888865555567778888888888644 444
No 279
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.3e-32 Score=324.49 Aligned_cols=296 Identities=19% Similarity=0.254 Sum_probs=203.6
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCc-ccCCCcccc-Ccccccc------ccCCCccEEEccccccccc
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNS-LVGNNSLSG-SLPSRID------LALPNVKALSLAYNRFSGT 147 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~-~lp~~~~------~~l~~L~~L~L~~N~i~~~ 147 (763)
..+++.|+|++|++.+.+|..|+++++|++|+|++|+ ++ | .+|..+. ..+++|++|+|++|+|+ .
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ls------g~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ 562 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGIS------AAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-E 562 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSC------HHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-B
T ss_pred CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcc------cccchHHHHhhhhcccccCCccEEEeeCCcCC-c
Confidence 4689999999999999999999999999999999998 75 5 5776543 34558999999999999 7
Q ss_pred CCC--cccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCccccccccc-ccEEEeecCccccc
Q 046240 148 IQS--PITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSIS-LERLYISNCSITGN 224 (763)
Q Consensus 148 ~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~-L~~L~L~~N~l~~~ 224 (763)
+|. .|.++++|++|+|++|+|+ .+| .|+++++|+.|+ +++|+++ .+|..+.++. + |++|+|++|+|+ .
T Consensus 563 ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~----Ls~N~l~-~lp~~l~~l~-~~L~~L~Ls~N~L~-~ 633 (876)
T 4ecn_A 563 FPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLK----LDYNQIE-EIPEDFCAFT-DQVEGLGFSHNKLK-Y 633 (876)
T ss_dssp CCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEE----CCSSCCS-CCCTTSCEEC-TTCCEEECCSSCCC-S
T ss_pred cCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEE----CcCCccc-cchHHHhhcc-ccCCEEECcCCCCC-c
Confidence 787 8999999999999999998 677 899999999998 7888888 7888888888 6 999999999988 6
Q ss_pred cccccCCccc--cceeecccccccCCCCccc---cccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccc
Q 046240 225 IPQVMGNLSI--FLLLDLELNKLTGPIPVTF---GRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSG 299 (763)
Q Consensus 225 ~~~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~ 299 (763)
+|..+..++. |+.|+|++|++++.+|... ..+...+|+.|+|++|+++ .+|.. .+..+++|+.|+|++|+|+
T Consensus 634 lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~-~~~~l~~L~~L~Ls~N~L~- 710 (876)
T 4ecn_A 634 IPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTE-LFATGSPISTIILSNNLMT- 710 (876)
T ss_dssp CCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHH-HHHTTCCCSEEECCSCCCS-
T ss_pred CchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHH-HHccCCCCCEEECCCCcCC-
Confidence 7777776654 8888888888876655322 2222123666666666666 44431 2235555666666666655
Q ss_pred cCCcccCC--------CcCccEEEccCccccCccccccc--ccccccEEeCcCCccCCccchhhhhhccCceEEccc---
Q 046240 300 DIPATIGG--------LKDVQNISLPYNRLEGPIPESFG--YLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSF--- 366 (763)
Q Consensus 300 ~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~--- 366 (763)
.+|..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++
T Consensus 711 ~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ 788 (876)
T 4ecn_A 711 SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRD 788 (876)
T ss_dssp CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBC
T ss_pred ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCC
Confidence 33332221 125556666666555 4455454 55566666666666555 354555555566665544
Q ss_pred ---ccCCCCCCCC-CCccccccccccCCCc
Q 046240 367 ---NKLEGEIPRG-GPFANFTAKSFMGNEK 392 (763)
Q Consensus 367 ---N~l~~~~p~~-~~~~~l~~~~~~~n~~ 392 (763)
|++.+.+|.. ..++.+..+++.+|..
T Consensus 789 ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 789 AEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp TTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred cccccccccChHHHhcCCCCCEEECCCCCC
Confidence 4455555533 3345555555555543
No 280
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.2e-32 Score=290.37 Aligned_cols=282 Identities=20% Similarity=0.228 Sum_probs=246.1
Q ss_pred CCcccceeecCC---------CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCc
Q 046240 64 VCNWIGITCDVN---------SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNV 134 (763)
Q Consensus 64 ~c~w~gv~c~~~---------~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L 134 (763)
.|.|..+.|... ..+++.|+|++|++++..+..|+++++|++|+|++|.++ .+++..+.++++|
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-------~~~~~~~~~l~~L 102 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-------KISPGAFAPLVKL 102 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC-------CBCTTTTTTCTTC
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCC-------eeCHHHhcCCCCC
Confidence 578999999642 257899999999999887889999999999999999996 5655566799999
Q ss_pred cEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccc--cCCccccccccccc
Q 046240 135 KALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNG--ILPSSIVNLSISLE 212 (763)
Q Consensus 135 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~--~~p~~~~~l~~~L~ 212 (763)
++|+|++|.|+ .+|..+. ++|++|++++|++++..+..|.++++|+.|+ +++|.+.. ..+..+.+++ +|+
T Consensus 103 ~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~----l~~n~l~~~~~~~~~~~~l~-~L~ 174 (330)
T 1xku_A 103 ERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVE----LGTNPLKSSGIENGAFQGMK-KLS 174 (330)
T ss_dssp CEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE----CCSSCCCGGGBCTTGGGGCT-TCC
T ss_pred CEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEE----CCCCcCCccCcChhhccCCC-CcC
Confidence 99999999999 4555554 7999999999999998889999999999999 88999964 7788888888 999
Q ss_pred EEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEc
Q 046240 213 RLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINL 292 (763)
Q Consensus 213 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~L 292 (763)
+|++++|+++. +|..+. ++|++|++++|++++..|..+..+++ |++|+|++|++++..+. .+..+++|++|+|
T Consensus 175 ~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~L 247 (330)
T 1xku_A 175 YIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNN--LAKLGLSFNSISAVDNG--SLANTPHLRELHL 247 (330)
T ss_dssp EEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTT--CCEEECCSSCCCEECTT--TGGGSTTCCEEEC
T ss_pred EEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCC--CCEEECCCCcCceeChh--hccCCCCCCEEEC
Confidence 99999999995 555443 89999999999999888999999977 99999999999987776 7899999999999
Q ss_pred ccccccccCCcccCCCcCccEEEccCccccCcccccccc------cccccEEeCcCCccCC--ccchhhhhhccCceEEc
Q 046240 293 SRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGY------LTSLEILDLSNNKISG--FILISLEKLLYLKKLNL 364 (763)
Q Consensus 293 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l 364 (763)
++|+++ .+|..+..+++|+.|++++|++++..+..|.. .+.|+.|++++|.+.. +.|..|..+..++.++|
T Consensus 248 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L 326 (330)
T 1xku_A 248 NNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 326 (330)
T ss_dssp CSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC
T ss_pred CCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEe
Confidence 999999 78889999999999999999999877777754 3789999999999874 67889999999999999
Q ss_pred cccc
Q 046240 365 SFNK 368 (763)
Q Consensus 365 ~~N~ 368 (763)
++|+
T Consensus 327 ~~N~ 330 (330)
T 1xku_A 327 GNYK 330 (330)
T ss_dssp ----
T ss_pred cccC
Confidence 9985
No 281
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.3e-32 Score=293.66 Aligned_cols=286 Identities=21% Similarity=0.265 Sum_probs=196.5
Q ss_pred ceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCC
Q 046240 78 RVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASK 157 (763)
Q Consensus 78 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~ 157 (763)
+++.+++++++++ .+|..+. ++|++|+|++|.++ .+++..+.++++|++|+|++|+|++..|..|.++++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~-------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 103 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDIS-------ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRK 103 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC-------EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTT
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCC-------ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCC
Confidence 3566777778777 5666553 67888888888875 566666667888888888888888777888888888
Q ss_pred CCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccc--cccccccCCcccc
Q 046240 158 LTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSIT--GNIPQVMGNLSIF 235 (763)
Q Consensus 158 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~--~~~~~~~~~l~~L 235 (763)
|++|+|++|+++. +|..+. ++|++|+ +++|.+++..+..+.+++ +|++|++++|+++ +..+..|..+ +|
T Consensus 104 L~~L~L~~n~l~~-l~~~~~--~~L~~L~----l~~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~l-~L 174 (332)
T 2ft3_A 104 LQKLYISKNHLVE-IPPNLP--SSLVELR----IHDNRIRKVPKGVFSGLR-NMNCIEMGGNPLENSGFEPGAFDGL-KL 174 (332)
T ss_dssp CCEEECCSSCCCS-CCSSCC--TTCCEEE----CCSSCCCCCCSGGGSSCS-SCCEEECCSCCCBGGGSCTTSSCSC-CC
T ss_pred CCEEECCCCcCCc-cCcccc--ccCCEEE----CCCCccCccCHhHhCCCc-cCCEEECCCCccccCCCCcccccCC-cc
Confidence 8888888888874 443333 6677766 667777766555666666 7777777777775 3566677777 77
Q ss_pred ceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEE
Q 046240 236 LLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNIS 315 (763)
Q Consensus 236 ~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 315 (763)
++|++++|++++ +|..+. + +|++|++++|++++..|. .+..+++|++|+|++|++++..+..|..+++|+.|+
T Consensus 175 ~~L~l~~n~l~~-l~~~~~--~--~L~~L~l~~n~i~~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 247 (332)
T 2ft3_A 175 NYLRISEAKLTG-IPKDLP--E--TLNELHLDHNKIQAIELE--DLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELH 247 (332)
T ss_dssp SCCBCCSSBCSS-CCSSSC--S--SCSCCBCCSSCCCCCCTT--SSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEE
T ss_pred CEEECcCCCCCc-cCcccc--C--CCCEEECCCCcCCccCHH--HhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEE
Confidence 777777777774 454443 2 377777777777765555 577777777777777777776666777777777777
Q ss_pred ccCccccCcccccccccccccEEeCcCCccCCccchhhhhh------ccCceEEcccccCC--CCCCCC-CCcccccccc
Q 046240 316 LPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKL------LYLKKLNLSFNKLE--GEIPRG-GPFANFTAKS 386 (763)
Q Consensus 316 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~l~~N~l~--~~~p~~-~~~~~l~~~~ 386 (763)
|++|+++ .+|..+..+++|+.|++++|+|+++.+..|... ..|+.|++++|+++ +..|.. ..++.+..++
T Consensus 248 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~ 326 (332)
T 2ft3_A 248 LDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQ 326 (332)
T ss_dssp CCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEE
T ss_pred CCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhh
Confidence 7777777 566667777777777777777777666666543 55777777777776 233321 2344455555
Q ss_pred ccCC
Q 046240 387 FMGN 390 (763)
Q Consensus 387 ~~~n 390 (763)
+.+|
T Consensus 327 l~~n 330 (332)
T 2ft3_A 327 FGNY 330 (332)
T ss_dssp C---
T ss_pred cccc
Confidence 5444
No 282
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=301.71 Aligned_cols=288 Identities=19% Similarity=0.244 Sum_probs=237.7
Q ss_pred CCCCCCCCcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEE
Q 046240 58 WTSNTSVCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKAL 137 (763)
Q Consensus 58 w~~~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L 137 (763)
|......|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|.++ .+|...+.++++|++|
T Consensus 23 ~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~-------~~~~~~~~~l~~L~~L 81 (353)
T 2z80_A 23 SNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRIT-------YISNSDLQRCVNLQAL 81 (353)
T ss_dssp ----CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCC-------EECTTTTTTCTTCCEE
T ss_pred CCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCc-------ccCHHHhccCCCCCEE
Confidence 4445678999887 74 5678888 5676655 58999999999995 7788777899999999
Q ss_pred EcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCC-cccccccccccEEEe
Q 046240 138 SLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILP-SSIVNLSISLERLYI 216 (763)
Q Consensus 138 ~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p-~~~~~l~~~L~~L~L 216 (763)
+|++|+|++..|..|.++++|++|+|++|+|+++.+..|+++++|++|+ +++|++++..+ ..+.+++ +|++|++
T Consensus 82 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~----L~~n~l~~l~~~~~~~~l~-~L~~L~l 156 (353)
T 2z80_A 82 VLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN----LLGNPYKTLGETSLFSHLT-KLQILRV 156 (353)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE----CTTCCCSSSCSSCSCTTCT-TCCEEEE
T ss_pred ECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE----CCCCCCcccCchhhhccCC-CCcEEEC
Confidence 9999999998889999999999999999999987777799999999999 88999886544 4677777 9999999
Q ss_pred ecC-ccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccc
Q 046240 217 SNC-SITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRN 295 (763)
Q Consensus 217 ~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N 295 (763)
++| .++...+..|.++++|++|++++|++++..|..+..+++ |++|++++|+++ .+|.. .+..+++|+.|++++|
T Consensus 157 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~--L~~L~l~~n~l~-~~~~~-~~~~~~~L~~L~L~~n 232 (353)
T 2z80_A 157 GNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQN--VSHLILHMKQHI-LLLEI-FVDVTSSVECLELRDT 232 (353)
T ss_dssp EESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSE--EEEEEEECSCST-THHHH-HHHHTTTEEEEEEESC
T ss_pred CCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcccc--CCeecCCCCccc-cchhh-hhhhcccccEEECCCC
Confidence 999 578777889999999999999999999888999999977 999999999987 44441 3556889999999999
Q ss_pred cccccCCcccC---CCcCccEEEccCccccC----cccccccccccccEEeCcCCccCCccchhhhhhccCceEEccccc
Q 046240 296 NFSGDIPATIG---GLKDVQNISLPYNRLEG----PIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNK 368 (763)
Q Consensus 296 ~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 368 (763)
++++..+..+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+++.+++..|..+++|++|++++|+
T Consensus 233 ~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 312 (353)
T 2z80_A 233 DLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNP 312 (353)
T ss_dssp BCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCC
Confidence 99976655544 35677888888888775 367788899999999999999998666667899999999999999
Q ss_pred CCCCCCC
Q 046240 369 LEGEIPR 375 (763)
Q Consensus 369 l~~~~p~ 375 (763)
+++.+|.
T Consensus 313 ~~~~~~~ 319 (353)
T 2z80_A 313 WDCSCPR 319 (353)
T ss_dssp BCCCHHH
T ss_pred ccCcCCC
Confidence 9987763
No 283
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.8e-32 Score=291.04 Aligned_cols=281 Identities=22% Similarity=0.263 Sum_probs=245.5
Q ss_pred CCcccceeecCC---------CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCc
Q 046240 64 VCNWIGITCDVN---------SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNV 134 (763)
Q Consensus 64 ~c~w~gv~c~~~---------~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L 134 (763)
.|.|..+.|... ..+++.|+|++|++++..|..|.++++|++|+|++|.++ .+++..+.++++|
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-------~~~~~~~~~l~~L 104 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS-------KIHEKAFSPLRKL 104 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-------EECGGGSTTCTTC
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccC-------ccCHhHhhCcCCC
Confidence 478999999653 247999999999999888889999999999999999996 6666667799999
Q ss_pred cEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCccc--ccCCccccccccccc
Q 046240 135 KALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLN--GILPSSIVNLSISLE 212 (763)
Q Consensus 135 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~--~~~p~~~~~l~~~L~ 212 (763)
++|+|++|.++ .+|..+. ++|++|++++|+++++.+..|.++++|+.|+ +++|.++ +..|..+..+ +|+
T Consensus 105 ~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~----l~~n~l~~~~~~~~~~~~l--~L~ 175 (332)
T 2ft3_A 105 QKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE----MGGNPLENSGFEPGAFDGL--KLN 175 (332)
T ss_dssp CEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE----CCSCCCBGGGSCTTSSCSC--CCS
T ss_pred CEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE----CCCCccccCCCCcccccCC--ccC
Confidence 99999999999 4555554 8999999999999988888899999999999 8899996 4677777776 899
Q ss_pred EEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEc
Q 046240 213 RLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINL 292 (763)
Q Consensus 213 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~L 292 (763)
+|++++|++++ +|..+. ++|++|+|++|++++..|..+..+++ |+.|+|++|++++..+. .+..+++|++|+|
T Consensus 176 ~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~--L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L 248 (332)
T 2ft3_A 176 YLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSK--LYRLGLGHNQIRMIENG--SLSFLPTLRELHL 248 (332)
T ss_dssp CCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTT--CSCCBCCSSCCCCCCTT--GGGGCTTCCEEEC
T ss_pred EEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCC--CCEEECCCCcCCcCChh--HhhCCCCCCEEEC
Confidence 99999999996 555544 79999999999999888899999977 99999999999987776 7899999999999
Q ss_pred ccccccccCCcccCCCcCccEEEccCccccCccccccccc------ccccEEeCcCCccC--CccchhhhhhccCceEEc
Q 046240 293 SRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYL------TSLEILDLSNNKIS--GFILISLEKLLYLKKLNL 364 (763)
Q Consensus 293 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~l 364 (763)
++|+++ .+|..+..+++|+.|++++|++++..+..|..+ ++|+.|++++|++. .+.|..|..+++|+.+++
T Consensus 249 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l 327 (332)
T 2ft3_A 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQF 327 (332)
T ss_dssp CSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC
T ss_pred CCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhc
Confidence 999999 788889999999999999999998777777653 67999999999998 778899999999999999
Q ss_pred cccc
Q 046240 365 SFNK 368 (763)
Q Consensus 365 ~~N~ 368 (763)
++|+
T Consensus 328 ~~n~ 331 (332)
T 2ft3_A 328 GNYK 331 (332)
T ss_dssp ----
T ss_pred cccc
Confidence 9985
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=2.7e-32 Score=298.09 Aligned_cols=295 Identities=22% Similarity=0.259 Sum_probs=242.8
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.++++|+|++|.+++..+..|..+++|++|+|++|.++ .+|+..+.++++|++|+|++|.|+...+..|.+++
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-------~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~ 141 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-------YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 141 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC-------cCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCC
Confidence 57999999999999877889999999999999999985 67777777899999999999999976666789999
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccc---------------cccccEEEeecCcc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNL---------------SISLERLYISNCSI 221 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l---------------~~~L~~L~L~~N~l 221 (763)
+|++|+|++|++++..|..|.++++|+.|+ +++|.+++.....+.++ ..+|++|++++|++
T Consensus 142 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~----l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l 217 (390)
T 3o6n_A 142 KLTTLSMSNNNLERIEDDTFQATTSLQNLQ----LSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSI 217 (390)
T ss_dssp TCCEEECCSSCCCBCCTTTTSSCTTCCEEE----CCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCC
T ss_pred CCcEEECCCCccCccChhhccCCCCCCEEE----CCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCee
Confidence 999999999999988888999999999999 78888886533322221 12566677777777
Q ss_pred ccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccC
Q 046240 222 TGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDI 301 (763)
Q Consensus 222 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~ 301 (763)
+.. |.. ..++|+.|++++|++++. ..+..+++ |++|+|++|.+++..|. .+..+++|++|+|++|++++ +
T Consensus 218 ~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~--L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~L~~n~l~~-~ 287 (390)
T 3o6n_A 218 NVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPG--LVEVDLSYNELEKIMYH--PFVKMQRLERLYISNNRLVA-L 287 (390)
T ss_dssp CEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTT--CSEEECCSSCCCEEESG--GGTTCSSCCEEECCSSCCCE-E
T ss_pred eec-ccc--ccccccEEECCCCCCccc--HHHcCCCC--ccEEECCCCcCCCcChh--HccccccCCEEECCCCcCcc-c
Confidence 644 322 247899999999999964 57888876 99999999999988788 89999999999999999995 5
Q ss_pred CcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccc
Q 046240 302 PATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFAN 381 (763)
Q Consensus 302 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 381 (763)
|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+.+. +..+++|+.|++++|++++.... ..+..
T Consensus 288 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~ 362 (390)
T 3o6n_A 288 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRN 362 (390)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTT
T ss_pred CcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccchhHH-HHHHH
Confidence 667788999999999999999 56777899999999999999999863 67789999999999999874322 12344
Q ss_pred cccccccCCCcccCCC
Q 046240 382 FTAKSFMGNEKLCGLP 397 (763)
Q Consensus 382 l~~~~~~~n~~~c~~p 397 (763)
+....+.+++..|..+
T Consensus 363 ~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 363 VARPAVDDADQHCKID 378 (390)
T ss_dssp CCTTTBCCCCSCCCTT
T ss_pred HHhhcccccCceeccc
Confidence 4555667777777765
No 285
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.98 E-value=1.3e-31 Score=310.15 Aligned_cols=161 Identities=22% Similarity=0.216 Sum_probs=144.4
Q ss_pred cccEEEeecCccccccc-cccCCccccceeecccccccCCCCccccccCCCCccEEEecCCcccc-CCCCccccccCCcc
Q 046240 210 SLERLYISNCSITGNIP-QVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSG-SIPSCIDIGNLKVV 287 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~-~~p~~~~~~~l~~L 287 (763)
+|++|++++|++.+..| ..|..+++|++|++++|.+++..|..+.++++ |++|++++|++++ .+|. .+..+++|
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~--~~~~l~~L 475 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTS--LNTLKMAGNSFKDNTLSN--VFANTTNL 475 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTT--CCEEECTTCEEGGGEECS--CCTTCTTC
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCC--CCEEECCCCcCCCcchHH--hhccCCCC
Confidence 56666666666666666 67889999999999999999999999999977 9999999999997 4777 78999999
Q ss_pred cEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhc-cCceEEccc
Q 046240 288 VEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLL-YLKKLNLSF 366 (763)
Q Consensus 288 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~ 366 (763)
++|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|+|+. +|..+..++ +|+.|++++
T Consensus 476 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~ 554 (606)
T 3vq2_A 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTN 554 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCS
T ss_pred CEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccC
Confidence 999999999999999999999999999999999999899999999999999999999997 555588887 599999999
Q ss_pred ccCCCCCCC
Q 046240 367 NKLEGEIPR 375 (763)
Q Consensus 367 N~l~~~~p~ 375 (763)
|++.+..+.
T Consensus 555 N~~~c~c~~ 563 (606)
T 3vq2_A 555 NSVACICEH 563 (606)
T ss_dssp CCCCCSSTT
T ss_pred CCcccCCcc
Confidence 999987764
No 286
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=3.2e-32 Score=313.91 Aligned_cols=295 Identities=23% Similarity=0.264 Sum_probs=248.6
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|+|++|.|++..|..|+.+++|++|+|++|.++ .+|+..|.++++|++|+|++|.|++..+..|.+++
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-------~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~ 147 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-------YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 147 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC-------CCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCC
Confidence 57999999999999888889999999999999999996 68888888999999999999999987777889999
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccc---------------cccccEEEeecCcc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNL---------------SISLERLYISNCSI 221 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l---------------~~~L~~L~L~~N~l 221 (763)
+|++|+|++|+|++..|..|+++++|+.|+ +++|.+++..+..+.++ ..+|++|++++|.+
T Consensus 148 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~----L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l 223 (597)
T 3oja_B 148 KLTTLSMSNNNLERIEDDTFQATTSLQNLQ----LSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSI 223 (597)
T ss_dssp TCCEEECCSSCCCBCCTTTTTTCTTCCEEE----CTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCC
T ss_pred CCCEEEeeCCcCCCCChhhhhcCCcCcEEE----CcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcc
Confidence 999999999999999999999999999999 88999887543332221 12456666666666
Q ss_pred ccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccC
Q 046240 222 TGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDI 301 (763)
Q Consensus 222 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~ 301 (763)
+...+.. .++|+.|+|++|.+++ +..+..+++ |+.|+|++|.+++.+|. .+..+++|+.|+|++|++++ +
T Consensus 224 ~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~--L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 224 NVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPG--LVEVDLSYNELEKIMYH--PFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp CEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTT--CSEEECCSSCCCEEESG--GGTTCSSCCEEECTTSCCCE-E
T ss_pred ccccccc---CCCCCEEECCCCCCCC--ChhhccCCC--CCEEECCCCccCCCCHH--HhcCccCCCEEECCCCCCCC-C
Confidence 6433332 2689999999999996 467888876 99999999999988888 89999999999999999996 5
Q ss_pred CcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccc
Q 046240 302 PATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFAN 381 (763)
Q Consensus 302 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 381 (763)
|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|+++. +..+++|+.|++++|++++..... .+..
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~-~~~~ 368 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRA-LFRN 368 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHH-HTTT
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHH-HHHH
Confidence 777888999999999999999 67778899999999999999999864 667889999999999998754321 2344
Q ss_pred cccccccCCCcccCCC
Q 046240 382 FTAKSFMGNEKLCGLP 397 (763)
Q Consensus 382 l~~~~~~~n~~~c~~p 397 (763)
+....+.+++..|+.+
T Consensus 369 ~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 369 VARPAVDDADQHCKID 384 (597)
T ss_dssp CCTTTBCCCCCCCCTT
T ss_pred HhhhccccccccCCcc
Confidence 4555677888888864
No 287
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=8.5e-32 Score=309.47 Aligned_cols=162 Identities=22% Similarity=0.265 Sum_probs=138.5
Q ss_pred cccEEEeecCccccccccccCCccccceeecccccccCCCC-ccccccCCCCccEEEecCCccccCCCCccccccCCccc
Q 046240 210 SLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIP-VTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVV 288 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~ 288 (763)
+|++|++++|++++..+. +..+++|++|++++|.+++..| ..+.++++ |++|++++|.+.+..|. .+.++++|+
T Consensus 374 ~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~--~~~~l~~L~ 448 (570)
T 2z63_A 374 SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN--LIYLDISHTHTRVAFNG--IFNGLSSLE 448 (570)
T ss_dssp CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTT--CCEEECTTSCCEECCTT--TTTTCTTCC
T ss_pred ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCC--CCEEeCcCCcccccchh--hhhcCCcCc
Confidence 344444444444433333 6677788888888888886665 46788876 99999999999988888 789999999
Q ss_pred EEEccccccc-ccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccc
Q 046240 289 EINLSRNNFS-GDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFN 367 (763)
Q Consensus 289 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 367 (763)
+|++++|+++ +.+|..+..+++|+.|+|++|++++..|..|..+++|++|+|++|+++++++..|..+++|+.|++++|
T Consensus 449 ~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 528 (570)
T 2z63_A 449 VLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528 (570)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCC
Confidence 9999999998 578999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCC
Q 046240 368 KLEGEIPRG 376 (763)
Q Consensus 368 ~l~~~~p~~ 376 (763)
++++.+|..
T Consensus 529 ~~~~~~~~~ 537 (570)
T 2z63_A 529 PWDCSCPRI 537 (570)
T ss_dssp CBCCCTTTT
T ss_pred cccCCCcch
Confidence 999998865
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=8e-31 Score=281.64 Aligned_cols=281 Identities=20% Similarity=0.310 Sum_probs=226.1
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCC
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNA 155 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l 155 (763)
..++++|+|++|.+++. +. +..+++|++|+|++|.++ .+| .+..+++|++|+|++|.+++..+ +.++
T Consensus 65 ~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~-------~~~--~~~~l~~L~~L~l~~n~i~~~~~--~~~l 131 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKIT-------DIS--ALQNLTNLRELYLNEDNISDISP--LANL 131 (347)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-------CCG--GGTTCTTCSEEECTTSCCCCCGG--GTTC
T ss_pred cCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCccc-------Cch--HHcCCCcCCEEECcCCcccCchh--hccC
Confidence 45788888888888854 33 888888888888888885 444 25578888888888888886543 7888
Q ss_pred CCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCcccc
Q 046240 156 SKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIF 235 (763)
Q Consensus 156 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L 235 (763)
++|++|++++|.....++ .+..+++|++|+ +++|.+.+..+ +..++ +|++|++++|++.+..+ +..+++|
T Consensus 132 ~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~----l~~~~~~~~~~--~~~l~-~L~~L~l~~n~l~~~~~--~~~l~~L 201 (347)
T 4fmz_A 132 TKMYSLNLGANHNLSDLS-PLSNMTGLNYLT----VTESKVKDVTP--IANLT-DLYSLSLNYNQIEDISP--LASLTSL 201 (347)
T ss_dssp TTCCEEECTTCTTCCCCG-GGTTCTTCCEEE----CCSSCCCCCGG--GGGCT-TCSEEECTTSCCCCCGG--GGGCTTC
T ss_pred CceeEEECCCCCCccccc-chhhCCCCcEEE----ecCCCcCCchh--hccCC-CCCEEEccCCccccccc--ccCCCcc
Confidence 888888888886654444 488888888888 77888876544 66676 89999999999886544 8888999
Q ss_pred ceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEE
Q 046240 236 LLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNIS 315 (763)
Q Consensus 236 ~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 315 (763)
+.|++++|.+++..+ +..+++ |++|++++|++++ ++. +..+++|++|++++|++++. ..+..+++|+.|+
T Consensus 202 ~~L~l~~n~l~~~~~--~~~~~~--L~~L~l~~n~l~~-~~~---~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~ 271 (347)
T 4fmz_A 202 HYFTAYVNQITDITP--VANMTR--LNSLKIGNNKITD-LSP---LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLN 271 (347)
T ss_dssp CEEECCSSCCCCCGG--GGGCTT--CCEEECCSSCCCC-CGG---GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEE
T ss_pred ceeecccCCCCCCch--hhcCCc--CCEEEccCCccCC-Ccc---hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEE
Confidence 999999999886544 777765 9999999999984 332 77889999999999999854 5688999999999
Q ss_pred ccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCc
Q 046240 316 LPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEK 392 (763)
Q Consensus 316 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~ 392 (763)
+++|++++. ..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++.+| ...++.+..+++.+|+.
T Consensus 272 l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 272 VGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQVI 345 (347)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC--
T ss_pred ccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhcc
Confidence 999999864 358889999999999999999889999999999999999999998877 55677888888888863
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.5e-31 Score=282.08 Aligned_cols=251 Identities=25% Similarity=0.303 Sum_probs=157.5
Q ss_pred CcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccc
Q 046240 65 CNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRF 144 (763)
Q Consensus 65 c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i 144 (763)
|.|.++.|+ +++++ .+|..+. ++|++|+|++|.++ .+|..+|.++++|++|+|++|.|
T Consensus 7 C~~~~l~c~------------~~~l~-~ip~~~~--~~l~~L~L~~n~l~-------~i~~~~~~~l~~L~~L~L~~n~l 64 (306)
T 2z66_A 7 CSGTEIRCN------------SKGLT-SVPTGIP--SSATRLELESNKLQ-------SLPHGVFDKLTQLTKLSLSSNGL 64 (306)
T ss_dssp EETTEEECC------------SSCCS-SCCSCCC--TTCCEEECCSSCCC-------CCCTTTTTTCTTCSEEECCSSCC
T ss_pred eCCCEEEcC------------CCCcc-cCCCCCC--CCCCEEECCCCccC-------ccCHhHhhccccCCEEECCCCcc
Confidence 566666664 45566 4555443 67888888888885 78888777888888888888888
Q ss_pred ccc--CCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCC-cccccccccccEEEeecCcc
Q 046240 145 SGT--IQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILP-SSIVNLSISLERLYISNCSI 221 (763)
Q Consensus 145 ~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p-~~~~~l~~~L~~L~L~~N~l 221 (763)
+.. .|..+.++++|++|+|++|++++ +|..|.++++|++|+ +++|++++..+ ..+.++. +|++|++++|++
T Consensus 65 ~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~----l~~n~l~~~~~~~~~~~l~-~L~~L~l~~n~l 138 (306)
T 2z66_A 65 SFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLD----FQHSNLKQMSEFSVFLSLR-NLIYLDISHTHT 138 (306)
T ss_dssp CEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEE----CTTSEEESSTTTTTTTTCT-TCCEEECTTSCC
T ss_pred CcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEE----CCCCcccccccchhhhhcc-CCCEEECCCCcC
Confidence 743 35666778888888888888874 555576666666665 55555554443 3444444 666666666666
Q ss_pred ccccccccCCccccceeecccccccC-CCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEccccccccc
Q 046240 222 TGNIPQVMGNLSIFLLLDLELNKLTG-PIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGD 300 (763)
Q Consensus 222 ~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~ 300 (763)
++..+..|..+++|++|+|++|.+++ ..|..+..+++ |++|+|++|++++..|. .+..+++|++|+|++|++++.
T Consensus 139 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~--L~~L~Ls~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 139 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN--LTFLDLSQCQLEQLSPT--AFNSLSSLQVLNMSHNNFFSL 214 (306)
T ss_dssp EECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT--CCEEECTTSCCCEECTT--TTTTCTTCCEEECTTSCCSBC
T ss_pred CccchhhcccCcCCCEEECCCCccccccchhHHhhCcC--CCEEECCCCCcCCcCHH--HhcCCCCCCEEECCCCccCcc
Confidence 65556666666666666666666654 34555555544 55666666655544444 455555555566665555555
Q ss_pred CCcccCCCcCccEEEccCccccCcccccccccc-cccEEeCcCCccCC
Q 046240 301 IPATIGGLKDVQNISLPYNRLEGPIPESFGYLT-SLEILDLSNNKISG 347 (763)
Q Consensus 301 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 347 (763)
.+..+..+++|+.|+|++|++++..|..+..++ +|++|+|++|+++.
T Consensus 215 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 215 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred ChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 454555555555555555555555555555553 55555555555554
No 290
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=9.2e-31 Score=290.49 Aligned_cols=249 Identities=22% Similarity=0.251 Sum_probs=166.6
Q ss_pred EEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCC
Q 046240 80 TALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLT 159 (763)
Q Consensus 80 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~ 159 (763)
..++.++++++ .+|..+. ++++.|+|++|+++ .++...|.++++|++|+|++|.|+++.+..|.++++|+
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~-------~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~ 115 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQ-------IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLN 115 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCC-------EECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCC
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCC-------eeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCC
Confidence 45667777777 5666554 56777777777774 56656666777777777777777766667777777777
Q ss_pred eeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceee
Q 046240 160 ILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLD 239 (763)
Q Consensus 160 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 239 (763)
+|+|++|+|+++.+..|.+++ +|++|+|++|+|+...+..|..+++|++|+
T Consensus 116 ~L~L~~n~l~~~~~~~~~~l~-----------------------------~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 166 (440)
T 3zyj_A 116 TLELFDNRLTTIPNGAFVYLS-----------------------------KLKELWLRNNPIESIPSYAFNRIPSLRRLD 166 (440)
T ss_dssp EEECCSSCCSSCCTTTSCSCS-----------------------------SCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred EEECCCCcCCeeCHhHhhccc-----------------------------cCceeeCCCCcccccCHHHhhhCcccCEeC
Confidence 777777777765555666655 455555555555555555566666666666
Q ss_pred ccc-ccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccC
Q 046240 240 LEL-NKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPY 318 (763)
Q Consensus 240 L~~-N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 318 (763)
|++ |.++...+..|.++++ |++|+|++|+++ .+|. +..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 167 l~~~~~l~~i~~~~~~~l~~--L~~L~L~~n~l~-~~~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 240 (440)
T 3zyj_A 167 LGELKRLSYISEGAFEGLSN--LRYLNLAMCNLR-EIPN---LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQ 240 (440)
T ss_dssp CCCCTTCCEECTTTTTTCSS--CCEEECTTSCCS-SCCC---CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCCCCcceeCcchhhcccc--cCeecCCCCcCc-cccc---cCCCcccCEEECCCCccCccChhhhccCccCCEEECCC
Confidence 665 3333333335555654 666666666666 4443 56667777777777777776677777777777777777
Q ss_pred ccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCC
Q 046240 319 NRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEI 373 (763)
Q Consensus 319 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 373 (763)
|++++..+..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|++.+..
T Consensus 241 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 241 SQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp CCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 7777666777777777777777777777776667777777777777777766543
No 291
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=4.4e-31 Score=302.08 Aligned_cols=293 Identities=20% Similarity=0.209 Sum_probs=230.2
Q ss_pred EEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCee
Q 046240 82 LNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTIL 161 (763)
Q Consensus 82 L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L 161 (763)
.|+++++++ .+|..+. ++|++|+|++|.++ .+++..+.++++|++|+|++|+|++..|..|.++++|++|
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~-------~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 79 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKIT-------YIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHL 79 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-------EECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccC-------ccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEE
Confidence 789999999 6777665 79999999999996 6666667799999999999999999999999999999999
Q ss_pred eecCcccccccccccCCCCchhhhhhhhhccCCcccc-cCCcccccccccccEEEeecCc-cccccccccCCccccceee
Q 046240 162 ELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNG-ILPSSIVNLSISLERLYISNCS-ITGNIPQVMGNLSIFLLLD 239 (763)
Q Consensus 162 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~-~~p~~~~~l~~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~ 239 (763)
+|++|++++..|..|+++++|++|+ +++|.+++ ..|..+.++. +|++|++++|+ +....+..|+++++|++|+
T Consensus 80 ~Ls~n~l~~~~~~~~~~l~~L~~L~----Ls~n~l~~~~~~~~~~~l~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 80 DLSDNHLSSLSSSWFGPLSSLKYLN----LMGNPYQTLGVTSLFPNLT-NLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp ECTTSCCCSCCHHHHTTCTTCCEEE----CTTCCCSSSCSSCSCTTCT-TCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred ECCCCccCccCHHHhccCCCCcEEE----CCCCcccccchhhhhhccC-CccEEECCCCccccccCHhhhhcccccCeee
Confidence 9999999999888899999999999 88999987 4678888998 99999999999 4544457899999999999
Q ss_pred cccccccCCCCccccccCC----------------------CCccEEEecCCccccCC--CCcccc--------------
Q 046240 240 LELNKLTGPIPVTFGRLQN----------------------SKLDTLSLCGNSFSGSI--PSCIDI-------------- 281 (763)
Q Consensus 240 L~~N~l~~~~p~~~~~l~~----------------------~~L~~L~L~~N~l~~~~--p~~~~~-------------- 281 (763)
+++|++++..|..+..+++ ++|++|++++|++++.. |.. ..
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~~~~~~~L~~L~l~~n 233 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLP-VDEVSSPMKKLAFRGS 233 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCS-SCCCCCCCCEEEEESC
T ss_pred ccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccc-hhhhhhcccceecccc
Confidence 9999999888888766532 23667777777766421 000 00
Q ss_pred -------------------------------------------------------------------------ccCCccc
Q 046240 282 -------------------------------------------------------------------------GNLKVVV 288 (763)
Q Consensus 282 -------------------------------------------------------------------------~~l~~L~ 288 (763)
...++|+
T Consensus 234 ~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~ 313 (549)
T 2z81_A 234 VLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVK 313 (549)
T ss_dssp EEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCC
T ss_pred ccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccce
Confidence 0012345
Q ss_pred EEEcccccccccCCccc-CCCcCccEEEccCccccCccc---ccccccccccEEeCcCCccCCccc--hhhhhhccCceE
Q 046240 289 EINLSRNNFSGDIPATI-GGLKDVQNISLPYNRLEGPIP---ESFGYLTSLEILDLSNNKISGFIL--ISLEKLLYLKKL 362 (763)
Q Consensus 289 ~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L 362 (763)
.|++++|+++ .+|..+ ..+++|+.|+|++|++++.+| ..++.+++|++|+|++|+++++.+ ..+..+++|++|
T Consensus 314 ~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L 392 (549)
T 2z81_A 314 RITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSL 392 (549)
T ss_dssp EEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEE
T ss_pred EEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEE
Confidence 5555555554 345444 468888888888888887654 346778888888888888887643 567888888888
Q ss_pred EcccccCCCCCCCCCCccccccccccCCC
Q 046240 363 NLSFNKLEGEIPRGGPFANFTAKSFMGNE 391 (763)
Q Consensus 363 ~l~~N~l~~~~p~~~~~~~l~~~~~~~n~ 391 (763)
++++|++++.++.....+.+..+++.+|.
T Consensus 393 ~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~ 421 (549)
T 2z81_A 393 DISRNTFHPMPDSCQWPEKMRFLNLSSTG 421 (549)
T ss_dssp ECTTCCCCCCCSCCCCCTTCCEEECTTSC
T ss_pred ECCCCCCccCChhhcccccccEEECCCCC
Confidence 88888888654444556778888888775
No 292
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2.1e-30 Score=288.73 Aligned_cols=249 Identities=22% Similarity=0.252 Sum_probs=154.9
Q ss_pred EEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCC
Q 046240 80 TALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLT 159 (763)
Q Consensus 80 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~ 159 (763)
..++.++++++ .+|..+. ++|++|+|++|.|+ .++...|.++++|++|+|++|+|+++.|..|.++++|+
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~-------~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 126 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQ-------MIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLN 126 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCC-------EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCc-------eECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCC
Confidence 34556666666 3454433 45566666665553 34444444555555555555555555555555555555
Q ss_pred eeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceee
Q 046240 160 ILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLD 239 (763)
Q Consensus 160 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 239 (763)
+|+|++|+|+++.+..|.+++ +|++|+|++|+|+...+..|..+++|+.|+
T Consensus 127 ~L~L~~n~l~~~~~~~~~~l~-----------------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 127 TLELFDNWLTVIPSGAFEYLS-----------------------------KLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp EEECCSSCCSBCCTTTSSSCT-----------------------------TCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred EEECCCCcCCccChhhhcccC-----------------------------CCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 555555555544444454444 566666666666655555666666666666
Q ss_pred ccc-ccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccC
Q 046240 240 LEL-NKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPY 318 (763)
Q Consensus 240 L~~-N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 318 (763)
|++ |.+....+..|.++++ |++|+|++|+++ .+|. +..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~--L~~L~L~~n~l~-~~~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 251 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFN--LKYLNLGMCNIK-DMPN---LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMN 251 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTT--CCEEECTTSCCS-SCCC---CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTT
T ss_pred CCCCCCccccChhhccCCCC--CCEEECCCCccc-cccc---ccccccccEEECcCCcCcccCcccccCccCCCEEEeCC
Confidence 666 3444333334666654 666666666666 3443 56667777777777777776677777777777777777
Q ss_pred ccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCC
Q 046240 319 NRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEI 373 (763)
Q Consensus 319 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 373 (763)
|++++..+..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|++.+..
T Consensus 252 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 252 SQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 7777666777777777777777777777766666777777777777777776544
No 293
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=2.4e-30 Score=301.15 Aligned_cols=282 Identities=24% Similarity=0.277 Sum_probs=229.4
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|+|++|+|+++.|.+|.+|++|++|+|++|+|+ .+|..+|.++++|++|+|++|+|+++.+..|++++
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-------~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~ 148 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-------SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLK 148 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-------EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCT
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-------CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCc
Confidence 57999999999999888889999999999999999996 88999998999999999999999988888899999
Q ss_pred CCCeeeecCcccccc-cccccCCCCchhhhhhhhhccCCcccccCCccccc-----------------------------
Q 046240 157 KLTILELGGNSFSGF-IPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVN----------------------------- 206 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~----------------------------- 206 (763)
+|++|+|++|+|++. .|..++++++|++|+ +++|++++..|..+..
T Consensus 149 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~----L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~ 224 (635)
T 4g8a_A 149 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLD----LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI 224 (635)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGGCTTCCEEE----CCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC
T ss_pred ccCeeccccCccccCCCchhhccchhhhhhc----ccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccch
Confidence 999999999999864 578888999999888 4455444332221110
Q ss_pred --------------------------------------------------------------------------------
Q 046240 207 -------------------------------------------------------------------------------- 206 (763)
Q Consensus 207 -------------------------------------------------------------------------------- 206 (763)
T Consensus 225 ~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 304 (635)
T 4g8a_A 225 RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNC 304 (635)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGG
T ss_pred hhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhh
Confidence
Q ss_pred -----------------------------------------------------------------ccccccEEEeecCcc
Q 046240 207 -----------------------------------------------------------------LSISLERLYISNCSI 221 (763)
Q Consensus 207 -----------------------------------------------------------------l~~~L~~L~L~~N~l 221 (763)
++ +|+.|++++|.+
T Consensus 305 ~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~-~L~~L~ls~n~l 383 (635)
T 4g8a_A 305 LTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP-SLEFLDLSRNGL 383 (635)
T ss_dssp GTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT-TCCEEECCSSCC
T ss_pred hcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc-ccccchhhcccc
Confidence 11 233344444433
Q ss_pred ccc--------------------------------------------------cccccCCccccceeecccccccCCCCc
Q 046240 222 TGN--------------------------------------------------IPQVMGNLSIFLLLDLELNKLTGPIPV 251 (763)
Q Consensus 222 ~~~--------------------------------------------------~~~~~~~l~~L~~L~L~~N~l~~~~p~ 251 (763)
... .+..|..+++++.++++.|.+++..|.
T Consensus 384 ~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~ 463 (635)
T 4g8a_A 384 SFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 463 (635)
T ss_dssp BEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTT
T ss_pred ccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhcccccccccccccccccccccccccccccccccc
Confidence 210 012234455556666666666666677
Q ss_pred cccccCCCCccEEEecCCccc-cCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCccccccc
Q 046240 252 TFGRLQNSKLDTLSLCGNSFS-GSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFG 330 (763)
Q Consensus 252 ~~~~l~~~~L~~L~L~~N~l~-~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 330 (763)
.+..++. ++.|+|++|++. +.+|. .+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.
T Consensus 464 ~~~~~~~--L~~L~Ls~N~~~~~~~~~--~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~ 539 (635)
T 4g8a_A 464 IFNGLSS--LEVLKMAGNSFQENFLPD--IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 539 (635)
T ss_dssp TTTTCTT--CCEEECTTCEEGGGEECS--CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGT
T ss_pred ccccchh--hhhhhhhhcccccccCch--hhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHh
Confidence 7777766 999999999854 45677 789999999999999999999999999999999999999999998899999
Q ss_pred ccccccEEeCcCCccCCccchhhhhh-ccCceEEcccccCCCCCC
Q 046240 331 YLTSLEILDLSNNKISGFILISLEKL-LYLKKLNLSFNKLEGEIP 374 (763)
Q Consensus 331 ~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~p 374 (763)
.+++|++|+|++|+|+++.|..+..+ ++|+.|+|++|+|++...
T Consensus 540 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 540 CLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999999999999988 689999999999998764
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=6.1e-31 Score=277.34 Aligned_cols=274 Identities=21% Similarity=0.252 Sum_probs=230.3
Q ss_pred CEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccc--cccccCCCCc
Q 046240 104 TKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGF--IPNTIGNLRN 181 (763)
Q Consensus 104 ~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~ 181 (763)
+.++.+++.++ .+|..++ ++|++|+|++|+|+.+.+..|.++++|++|+|++|+++.. .+..+.++++
T Consensus 10 ~~l~c~~~~l~-------~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~ 79 (306)
T 2z66_A 10 TEIRCNSKGLT-------SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTS 79 (306)
T ss_dssp TEEECCSSCCS-------SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSC
T ss_pred CEEEcCCCCcc-------cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccc
Confidence 57888888886 7887664 6899999999999977777789999999999999999843 3677888999
Q ss_pred hhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccc-cccCCccccceeecccccccCCCCccccccCCCC
Q 046240 182 IEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIP-QVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSK 260 (763)
Q Consensus 182 L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~ 260 (763)
|++|+ +++|.+++ +|..+.+++ +|++|++++|++++..+ ..+..+++|++|++++|.+++..|..+..+++
T Consensus 80 L~~L~----Ls~n~i~~-l~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-- 151 (306)
T 2z66_A 80 LKYLD----LSFNGVIT-MSSNFLGLE-QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS-- 151 (306)
T ss_dssp CCEEE----CCSCSEEE-EEEEEETCT-TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTT--
T ss_pred cCEEE----CCCCcccc-ChhhcCCCC-CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcC--
Confidence 99999 88998884 677788888 99999999999997665 68999999999999999999888888988876
Q ss_pred ccEEEecCCcccc-CCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEe
Q 046240 261 LDTLSLCGNSFSG-SIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILD 339 (763)
Q Consensus 261 L~~L~L~~N~l~~-~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 339 (763)
|++|++++|.+++ .+|. .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+
T Consensus 152 L~~L~l~~n~l~~~~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 152 LEVLKMAGNSFQENFLPD--IFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp CCEEECTTCEEGGGEECS--CCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred CCEEECCCCccccccchh--HHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 9999999999986 5677 788999999999999999988899999999999999999999987777889999999999
Q ss_pred CcCCccCCccchhhhhhc-cCceEEcccccCCCCCCCCC---CccccccccccCCCcccCCC
Q 046240 340 LSNNKISGFILISLEKLL-YLKKLNLSFNKLEGEIPRGG---PFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 340 L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~---~~~~l~~~~~~~n~~~c~~p 397 (763)
|++|++++..+..+..++ +|+.|+|++|++++..+... -+.....+....+...|..|
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 999999998888888884 89999999999988654221 11222333444555666554
No 295
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=4.5e-30 Score=275.76 Aligned_cols=283 Identities=22% Similarity=0.312 Sum_probs=243.5
Q ss_pred CCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccC
Q 046240 75 NSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITN 154 (763)
Q Consensus 75 ~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~ 154 (763)
...++++|+++++.+.. ++ .+..+++|++|+|++|.++ .+|. +..+++|++|+|++|.+++. +.|.+
T Consensus 42 ~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~-------~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~ 108 (347)
T 4fmz_A 42 ELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQIT-------DISP--LSNLVKLTNLYIGTNKITDI--SALQN 108 (347)
T ss_dssp HHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC-------CCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred hcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccc-------cchh--hhcCCcCCEEEccCCcccCc--hHHcC
Confidence 34689999999999984 44 4999999999999999996 5665 66999999999999999964 46999
Q ss_pred CCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccc
Q 046240 155 ASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSI 234 (763)
Q Consensus 155 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~ 234 (763)
+++|++|+|++|++++..+ +.++++|+.|+ +++|.....++. +..++ +|++|++++|.+.+..+ +..+++
T Consensus 109 l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~----l~~n~~~~~~~~-~~~l~-~L~~L~l~~~~~~~~~~--~~~l~~ 178 (347)
T 4fmz_A 109 LTNLRELYLNEDNISDISP--LANLTKMYSLN----LGANHNLSDLSP-LSNMT-GLNYLTVTESKVKDVTP--IANLTD 178 (347)
T ss_dssp CTTCSEEECTTSCCCCCGG--GTTCTTCCEEE----CTTCTTCCCCGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTT
T ss_pred CCcCCEEECcCCcccCchh--hccCCceeEEE----CCCCCCcccccc-hhhCC-CCcEEEecCCCcCCchh--hccCCC
Confidence 9999999999999997654 99999999999 788866655444 77887 99999999999996655 899999
Q ss_pred cceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEE
Q 046240 235 FLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNI 314 (763)
Q Consensus 235 L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 314 (763)
|++|++++|.+++..+ +..+++ |+.|++++|.+++. + .+..+++|++|++++|++++..+ +..+++|+.|
T Consensus 179 L~~L~l~~n~l~~~~~--~~~l~~--L~~L~l~~n~l~~~-~---~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 248 (347)
T 4fmz_A 179 LYSLSLNYNQIEDISP--LASLTS--LHYFTAYVNQITDI-T---PVANMTRLNSLKIGNNKITDLSP--LANLSQLTWL 248 (347)
T ss_dssp CSEEECTTSCCCCCGG--GGGCTT--CCEEECCSSCCCCC-G---GGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred CCEEEccCCccccccc--ccCCCc--cceeecccCCCCCC-c---hhhcCCcCCEEEccCCccCCCcc--hhcCCCCCEE
Confidence 9999999999995443 777866 99999999999854 3 27889999999999999996544 9999999999
Q ss_pred EccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC-CCccccccccccCCCcc
Q 046240 315 SLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG-GPFANFTAKSFMGNEKL 393 (763)
Q Consensus 315 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~ 393 (763)
++++|++++. ..+..+++|++|++++|+++++ ..+..+++|+.|++++|++++..|.. ..++.+..+++.+|+..
T Consensus 249 ~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 249 EIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred ECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccc
Confidence 9999999964 4689999999999999999985 46889999999999999999877653 45788999999999754
Q ss_pred c
Q 046240 394 C 394 (763)
Q Consensus 394 c 394 (763)
.
T Consensus 325 ~ 325 (347)
T 4fmz_A 325 D 325 (347)
T ss_dssp C
T ss_pred c
Confidence 4
No 296
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=6.7e-30 Score=285.74 Aligned_cols=279 Identities=28% Similarity=0.368 Sum_probs=182.4
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCC
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNA 155 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l 155 (763)
..++++|+|++|.+++..+ +.++++|++|+|++|.++ .++. +.++++|++|+|++|.+++..+ +.++
T Consensus 67 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~-------~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l 133 (466)
T 1o6v_A 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-------DITP--LANLTNLTGLTLFNNQITDIDP--LKNL 133 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-------CCGG--GTTCTTCCEEECCSSCCCCCGG--GTTC
T ss_pred hcCCCEEECCCCccCCchh--hhccccCCEEECCCCccc-------cChh--hcCCCCCCEEECCCCCCCCChH--HcCC
Confidence 4678899999998886543 888888999998888885 4444 4577888888888888876543 7777
Q ss_pred CCCCeeeecCcccccccc-------------------cccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEe
Q 046240 156 SKLTILELGGNSFSGFIP-------------------NTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYI 216 (763)
Q Consensus 156 ~~L~~L~L~~N~l~~~~p-------------------~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L 216 (763)
++|++|++++|++++... ..+.++++|+.|+ +++|.+++. ..+..+. +|++|++
T Consensus 134 ~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~----l~~n~l~~~--~~l~~l~-~L~~L~l 206 (466)
T 1o6v_A 134 TNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLD----ISSNKVSDI--SVLAKLT-NLESLIA 206 (466)
T ss_dssp TTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEE----CCSSCCCCC--GGGGGCT-TCSEEEC
T ss_pred CCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEE----CcCCcCCCC--hhhccCC-CCCEEEe
Confidence 888888888877765321 1255566666666 677777654 2356666 7778888
Q ss_pred ecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEccccc
Q 046240 217 SNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNN 296 (763)
Q Consensus 217 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~ 296 (763)
++|++++..| ++.+++|++|++++|++++. ..+..+++ |+.|++++|.+++..| +..+++|++|++++|+
T Consensus 207 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~--L~~L~l~~n~l~~~~~----~~~l~~L~~L~l~~n~ 276 (466)
T 1o6v_A 207 TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTN--LTDLDLANNQISNLAP----LSGLTKLTELKLGANQ 276 (466)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTT--CSEEECCSSCCCCCGG----GTTCTTCSEEECCSSC
T ss_pred cCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCC--CCEEECCCCccccchh----hhcCCCCCEEECCCCc
Confidence 8777776555 66677777777777777642 24555554 7777777777664322 5566666666666666
Q ss_pred ccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC
Q 046240 297 FSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG 376 (763)
Q Consensus 297 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 376 (763)
+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++. +..
T Consensus 277 l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l 349 (466)
T 1o6v_A 277 ISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSL 349 (466)
T ss_dssp CCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGG
T ss_pred cCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhh
Confidence 664333 6666666666666666664433 5566666666666666666544 55666666666666666654 333
Q ss_pred CCccccccccccCCC
Q 046240 377 GPFANFTAKSFMGNE 391 (763)
Q Consensus 377 ~~~~~l~~~~~~~n~ 391 (763)
..++.+..+++.+|.
T Consensus 350 ~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 350 ANLTNINWLSAGHNQ 364 (466)
T ss_dssp TTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCCCc
Confidence 445555555555554
No 297
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.9e-32 Score=306.95 Aligned_cols=235 Identities=21% Similarity=0.190 Sum_probs=135.5
Q ss_pred CCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCC
Q 046240 101 PSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLR 180 (763)
Q Consensus 101 ~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 180 (763)
++|++|+|++|.++ .+++..+..+++|++|+|++|.|++..| |.++++|++|+|++|+|+++.+. +
T Consensus 34 ~~L~~L~Ls~n~l~-------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~ 99 (487)
T 3oja_A 34 WNVKELDLSGNPLS-------QISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----P 99 (487)
T ss_dssp GGCCEEECCSSCCC-------CCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----T
T ss_pred CCccEEEeeCCcCC-------CCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----C
Confidence 36777777777664 4555555566777777777777665554 66667777777777776644322 5
Q ss_pred chhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCcccc-ccCCC
Q 046240 181 NIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFG-RLQNS 259 (763)
Q Consensus 181 ~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~~ 259 (763)
+|+.|+ +++|.+++..+..+ + +|++|+|++|+|++..|..|+.+++|++|+|++|.+++..|..+. .+++
T Consensus 100 ~L~~L~----L~~N~l~~~~~~~l---~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~- 170 (487)
T 3oja_A 100 SIETLH----AANNNISRVSCSRG---Q-GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT- 170 (487)
T ss_dssp TCCEEE----CCSSCCCCEEECCC---S-SCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTT-
T ss_pred CcCEEE----CcCCcCCCCCcccc---C-CCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCc-
Confidence 555555 55666655544322 2 566666666666665566666666666666666666655555554 4443
Q ss_pred CccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEe
Q 046240 260 KLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILD 339 (763)
Q Consensus 260 ~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 339 (763)
|+.|+|++|.+++. |. ...+++|+.|+|++|+|++. |..|..+++|+.|+|++|+|++ +|..+..+++|+.|+
T Consensus 171 -L~~L~Ls~N~l~~~-~~---~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~ 243 (487)
T 3oja_A 171 -LEHLNLQYNFIYDV-KG---QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFD 243 (487)
T ss_dssp -CCEEECTTSCCCEE-EC---CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEE
T ss_pred -ccEEecCCCccccc-cc---cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEE
Confidence 66666666666533 22 22355666666666666543 3335555666666666666653 454555556666666
Q ss_pred CcCCccC-CccchhhhhhccCceEEcc
Q 046240 340 LSNNKIS-GFILISLEKLLYLKKLNLS 365 (763)
Q Consensus 340 L~~N~l~-~~~~~~~~~l~~L~~L~l~ 365 (763)
+++|++. +.+|..+..++.|+.++++
T Consensus 244 l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 244 LRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 6666655 3345555555555555544
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-30 Score=281.34 Aligned_cols=278 Identities=19% Similarity=0.167 Sum_probs=240.3
Q ss_pred CCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCC
Q 046240 101 PSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLR 180 (763)
Q Consensus 101 ~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 180 (763)
+.....++++|.++ .+|..++ ++|++|+|++|+|++..+..|.++++|++|+|++|+|+++.|..|++++
T Consensus 31 ~~~~~c~~~~~~l~-------~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (353)
T 2z80_A 31 DRNGICKGSSGSLN-------SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLG 100 (353)
T ss_dssp CTTSEEECCSTTCS-------SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred CCCeEeeCCCCCcc-------ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCC
Confidence 34445788899886 8888775 5899999999999988888999999999999999999999899999999
Q ss_pred chhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccc-cccCCccccceeecccc-cccCCCCccccccCC
Q 046240 181 NIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIP-QVMGNLSIFLLLDLELN-KLTGPIPVTFGRLQN 258 (763)
Q Consensus 181 ~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~ 258 (763)
+|++|+ +++|++++..+..+.++. +|++|+|++|++++..+ ..|..+++|++|++++| .+++..|..|.++++
T Consensus 101 ~L~~L~----Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 175 (353)
T 2z80_A 101 SLEHLD----LSYNYLSNLSSSWFKPLS-SLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTF 175 (353)
T ss_dssp TCCEEE----CCSSCCSSCCHHHHTTCT-TCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred CCCEEE----CCCCcCCcCCHhHhCCCc-cCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCC
Confidence 999999 889999976555588888 99999999999996555 58999999999999999 577777888999977
Q ss_pred CCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCccccccc---ccccc
Q 046240 259 SKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFG---YLTSL 335 (763)
Q Consensus 259 ~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L 335 (763)
|++|++++|++++..|. .+..+++|++|++++|+++...+..+..+++|+.|++++|++++..+..+. ..+.+
T Consensus 176 --L~~L~l~~n~l~~~~~~--~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l 251 (353)
T 2z80_A 176 --LEELEIDASDLQSYEPK--SLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLI 251 (353)
T ss_dssp --EEEEEEEETTCCEECTT--TTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCC
T ss_pred --CCEEECCCCCcCccCHH--HHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchh
Confidence 99999999999988888 899999999999999999855545566789999999999999976665443 46778
Q ss_pred cEEeCcCCccCCc----cchhhhhhccCceEEcccccCCCCCCCC-CCccccccccccCCCcccCCC
Q 046240 336 EILDLSNNKISGF----ILISLEKLLYLKKLNLSFNKLEGEIPRG-GPFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 336 ~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~c~~p 397 (763)
+.++|++|.+++. +|..+..+++|+.|++++|+++..++.. ..++.+..+++.+|++.|++|
T Consensus 252 ~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 252 KKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 8899999988873 6778899999999999999999655543 578899999999999999886
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=3.2e-30 Score=268.85 Aligned_cols=262 Identities=22% Similarity=0.233 Sum_probs=189.7
Q ss_pred ceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccC
Q 046240 69 GITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTI 148 (763)
Q Consensus 69 gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~ 148 (763)
++.|... ..+.++.++++++ .+|..+ .++|++|+|++|.++ .+|...+..+++|++|+|++|.|++..
T Consensus 5 ~C~C~~~--~~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~-------~~~~~~~~~~~~L~~L~l~~n~l~~~~ 72 (285)
T 1ozn_A 5 ACVCYNE--PKVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRIS-------HVPAASFRACRNLTILWLHSNVLARID 72 (285)
T ss_dssp TCEEECS--SSCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCC-------EECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CceECCC--CCeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCC-------ccCHHHcccCCCCCEEECCCCccceeC
Confidence 5667543 2367888888888 456544 467888888888875 566666667778888888888877777
Q ss_pred CCcccCCCCCCeeeecCcc-cccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCcccccccc
Q 046240 149 QSPITNASKLTILELGGNS-FSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQ 227 (763)
Q Consensus 149 p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~ 227 (763)
|..|.++++|++|+|++|+ ++...|..|.+++ +|++|+|++|++++..|.
T Consensus 73 ~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~-----------------------------~L~~L~l~~n~l~~~~~~ 123 (285)
T 1ozn_A 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLG-----------------------------RLHTLHLDRCGLQELGPG 123 (285)
T ss_dssp TTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCT-----------------------------TCCEEECTTSCCCCCCTT
T ss_pred HhhcCCccCCCEEeCCCCCCccccCHHHhcCCc-----------------------------CCCEEECCCCcCCEECHh
Confidence 7777777778888887776 6655566666555 566666666666666666
Q ss_pred ccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCC
Q 046240 228 VMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGG 307 (763)
Q Consensus 228 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 307 (763)
.|..+++|++|+|++|++++..+..|..+++ |++|+|++|++++..+. .+..+++|++|+|++|++++..|..|..
T Consensus 124 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 199 (285)
T 1ozn_A 124 LFRGLAALQYLYLQDNALQALPDDTFRDLGN--LTHLFLHGNRISSVPER--AFRGLHSLDRLLLHQNRVAHVHPHAFRD 199 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTT--CCEEECCSSCCCEECTT--TTTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred HhhCCcCCCEEECCCCcccccCHhHhccCCC--ccEEECCCCcccccCHH--HhcCccccCEEECCCCcccccCHhHccC
Confidence 6777777777777777777655556666655 77777777777754444 5777888888888888888877888888
Q ss_pred CcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCC
Q 046240 308 LKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG 376 (763)
Q Consensus 308 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 376 (763)
+++|+.|++++|++++..+..+..+++|+.|+|++|++....+. ..-...++.+..+.|.+.+..|..
T Consensus 200 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 200 LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGG
T ss_pred cccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchH
Confidence 88888888888888877667788888888888888888764332 123345666677888888877754
No 300
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=1.5e-29 Score=282.94 Aligned_cols=214 Identities=24% Similarity=0.357 Sum_probs=94.8
Q ss_pred cCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCc
Q 046240 153 TNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNL 232 (763)
Q Consensus 153 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l 232 (763)
.++++|++|++++|++++. ..+..+++|+.|+ +++|.+++..| +..+. +|++|++++|++++. ..+..+
T Consensus 174 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~----l~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~~~--~~l~~l 242 (466)
T 1o6v_A 174 ANLTTLERLDISSNKVSDI--SVLAKLTNLESLI----ATNNQISDITP--LGILT-NLDELSLNGNQLKDI--GTLASL 242 (466)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEE----CCSSCCCCCGG--GGGCT-TCCEEECCSSCCCCC--GGGGGC
T ss_pred ccCCCCCEEECcCCcCCCC--hhhccCCCCCEEE----ecCCccccccc--ccccC-CCCEEECCCCCcccc--hhhhcC
Confidence 3344444444444444432 1244444444444 44444444333 33333 444555555444432 234444
Q ss_pred cccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCcc
Q 046240 233 SIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQ 312 (763)
Q Consensus 233 ~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 312 (763)
++|++|++++|.+++..| +..+++ |++|++++|.+++. +. +..+++|+.|++++|++++..+ +..+++|+
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~--L~~L~l~~n~l~~~-~~---~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 312 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTK--LTELKLGANQISNI-SP---LAGLTALTNLELNENQLEDISP--ISNLKNLT 312 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTT--CSEEECCSSCCCCC-GG---GTTCTTCSEEECCSSCCSCCGG--GGGCTTCS
T ss_pred CCCCEEECCCCccccchh--hhcCCC--CCEEECCCCccCcc-cc---ccCCCccCeEEcCCCcccCchh--hcCCCCCC
Confidence 445555555554443322 344433 44455555444422 11 3344444445555554443222 44444445
Q ss_pred EEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCc
Q 046240 313 NISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEK 392 (763)
Q Consensus 313 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~ 392 (763)
.|+|++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++.+| ...++.+..+++.+|++
T Consensus 313 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~ 387 (466)
T 1o6v_A 313 YLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAW 387 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEE
T ss_pred EEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcc
Confidence 55555554444333 34444455555555544442 234444445555555554444444 33344444444444433
No 301
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=9.2e-30 Score=283.47 Aligned_cols=230 Identities=20% Similarity=0.192 Sum_probs=180.9
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|+|++|+|++..|..|.++++|++|+|++|.|+ .++...|.++++|++|+|++|+|++..+..|.+++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 147 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-------QIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLS 147 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-------EECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCT
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-------CcChhhccCcccCCEEECCCCcCCccChhhhcccC
Confidence 57999999999999999999999999999999999996 77778888999999999999999988888999999
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL 236 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 236 (763)
+|++|+|++|+|+.+.+..|.++++|+.|+ +++| |.+....+..|.++++|+
T Consensus 148 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~----l~~~------------------------~~l~~i~~~~~~~l~~L~ 199 (452)
T 3zyi_A 148 KLRELWLRNNPIESIPSYAFNRVPSLMRLD----LGEL------------------------KKLEYISEGAFEGLFNLK 199 (452)
T ss_dssp TCCEEECCSCCCCEECTTTTTTCTTCCEEE----CCCC------------------------TTCCEECTTTTTTCTTCC
T ss_pred CCCEEECCCCCcceeCHhHHhcCCcccEEe----CCCC------------------------CCccccChhhccCCCCCC
Confidence 999999999999987777888777655555 3332 333333344566666666
Q ss_pred eeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEc
Q 046240 237 LLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISL 316 (763)
Q Consensus 237 ~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 316 (763)
+|+|++|++++ +| .+..+++ |++|+|++|++++..|. .|.++++|+.|+|++|++++..|..|.++++|+.|+|
T Consensus 200 ~L~L~~n~l~~-~~-~~~~l~~--L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 273 (452)
T 3zyi_A 200 YLNLGMCNIKD-MP-NLTPLVG--LEELEMSGNHFPEIRPG--SFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNL 273 (452)
T ss_dssp EEECTTSCCSS-CC-CCTTCTT--CCEEECTTSCCSEECGG--GGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred EEECCCCcccc-cc-ccccccc--ccEEECcCCcCcccCcc--cccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEEC
Confidence 66666666663 33 3555544 77777777777766666 6777777888888888887777777888888888888
Q ss_pred cCccccCcccccccccccccEEeCcCCccCC
Q 046240 317 PYNRLEGPIPESFGYLTSLEILDLSNNKISG 347 (763)
Q Consensus 317 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 347 (763)
++|+|++..+..|..+++|+.|+|++|++.-
T Consensus 274 ~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 274 AHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 8888887666777778888888888887654
No 302
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.9e-29 Score=279.89 Aligned_cols=251 Identities=22% Similarity=0.212 Sum_probs=220.5
Q ss_pred CCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCch
Q 046240 103 LTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNI 182 (763)
Q Consensus 103 L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 182 (763)
...++.+++.++ .+|..++ ++++.|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|.+++
T Consensus 45 ~~~v~c~~~~l~-------~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~-- 112 (440)
T 3zyj_A 45 FSKVICVRKNLR-------EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLA-- 112 (440)
T ss_dssp SCEEECCSCCCS-------SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCS--
T ss_pred CCEEEeCCCCcC-------cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCc--
Confidence 456888888885 7888765 6789999999999988888999999999999999999877777776655
Q ss_pred hhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCcc
Q 046240 183 EWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLD 262 (763)
Q Consensus 183 ~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~ 262 (763)
+|++|+|++|+|+...+..|..+++|++|+|++|+|+...+..|.++++ |+
T Consensus 113 ---------------------------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~--L~ 163 (440)
T 3zyj_A 113 ---------------------------NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPS--LR 163 (440)
T ss_dssp ---------------------------SCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTT--CC
T ss_pred ---------------------------cCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcc--cC
Confidence 6778888899999788889999999999999999999887888999977 99
Q ss_pred EEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcC
Q 046240 263 TLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSN 342 (763)
Q Consensus 263 ~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 342 (763)
+|+|++|+..+.++.. .|.++++|++|+|++|+++ .+| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 164 ~L~l~~~~~l~~i~~~-~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 240 (440)
T 3zyj_A 164 RLDLGELKRLSYISEG-AFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQ 240 (440)
T ss_dssp EEECCCCTTCCEECTT-TTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred EeCCCCCCCcceeCcc-hhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCC
Confidence 9999995544355442 6899999999999999999 455 489999999999999999988899999999999999999
Q ss_pred CccCCccchhhhhhccCceEEcccccCCCCCCCC-CCccccccccccCCCcccCCC
Q 046240 343 NKISGFILISLEKLLYLKKLNLSFNKLEGEIPRG-GPFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 343 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n~~~c~~p 397 (763)
|+|+++.+..|..+++|+.|+|++|++++.++.. ..++.+..+++.+|||.|+|.
T Consensus 241 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 241 SQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9999999999999999999999999999887765 567889999999999999986
No 303
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=1.7e-30 Score=274.51 Aligned_cols=229 Identities=29% Similarity=0.498 Sum_probs=170.8
Q ss_pred CCceEEEEecC-CCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccC
Q 046240 76 SHRVTALNISS-LNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITN 154 (763)
Q Consensus 76 ~~~v~~L~L~~-~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~ 154 (763)
..+++.|+|++ |++.+.+|..|+++++|++|+|++|.++ +.+|..+ .++++|++|+|++|.|++.+|..|.+
T Consensus 75 l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~------~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~ 147 (313)
T 1ogq_A 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVS------GAIPDFL-SQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCE------EECCGGG-GGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeC------CcCCHHH-hCCCCCCEEeCCCCccCCcCChHHhc
Confidence 46899999995 9999999999999999999999999986 4677655 48999999999999999999999999
Q ss_pred CCCCCeeeecCcccccccccccCCCC-chhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCcc
Q 046240 155 ASKLTILELGGNSFSGFIPNTIGNLR-NIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLS 233 (763)
Q Consensus 155 l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 233 (763)
+++|++|+|++|++++.+|..|..++ +|+ +|+|++|++++.+|..|..++
T Consensus 148 l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~-----------------------------~L~L~~N~l~~~~~~~~~~l~ 198 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFT-----------------------------SMTISRNRLTGKIPPTFANLN 198 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCCTTCC-----------------------------EEECCSSEEEEECCGGGGGCC
T ss_pred CCCCCeEECcCCcccCcCCHHHhhhhhcCc-----------------------------EEECcCCeeeccCChHHhCCc
Confidence 99999999999999988888887776 444 455555555555555555554
Q ss_pred ccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccE
Q 046240 234 IFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQN 313 (763)
Q Consensus 234 ~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 313 (763)
|++|+|++|++++..|..|..+++ |+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..|..+++|+.
T Consensus 199 -L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~---~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 272 (313)
T 1ogq_A 199 -LAFVDLSRNMLEGDASVLFGSDKN--TQKIHLAKNSLAFDLGK---VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHS 272 (313)
T ss_dssp -CSEEECCSSEEEECCGGGCCTTSC--CSEEECCSSEECCBGGG---CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCE
T ss_pred -ccEEECcCCcccCcCCHHHhcCCC--CCEEECCCCceeeecCc---ccccCCCCEEECcCCcccCcCChHHhcCcCCCE
Confidence 555555555555555555555544 55566666655544443 455666777777777777667777777777777
Q ss_pred EEccCccccCcccccccccccccEEeCcCCc-cCC
Q 046240 314 ISLPYNRLEGPIPESFGYLTSLEILDLSNNK-ISG 347 (763)
Q Consensus 314 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~ 347 (763)
|+|++|++++.+|.. ..+++|+.|++++|+ +.+
T Consensus 273 L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 273 LNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp EECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred EECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 777777777666664 667777777777776 554
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=8.8e-30 Score=265.52 Aligned_cols=251 Identities=23% Similarity=0.216 Sum_probs=203.7
Q ss_pred CEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchh
Q 046240 104 TKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIE 183 (763)
Q Consensus 104 ~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 183 (763)
++++.+++.++ .+|..+ .++|++|+|++|.|++..+..|.++++|++|+|++|+++++.|..|.+++
T Consensus 14 ~~~~c~~~~l~-------~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~--- 80 (285)
T 1ozn_A 14 VTTSCPQQGLQ-------AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLA--- 80 (285)
T ss_dssp CEEECCSSCCS-------SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT---
T ss_pred eEEEcCcCCcc-------cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCcc---
Confidence 56666666664 555543 24666667777766666666666666666666666666655555554443
Q ss_pred hhhhhhhccCCcccccCCcccccccccccEEEeecCc-cccccccccCCccccceeecccccccCCCCccccccCCCCcc
Q 046240 184 WLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCS-ITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLD 262 (763)
Q Consensus 184 ~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~ 262 (763)
+|++|+|++|+ ++...|..|..+++|++|+|++|++++..|..+.++++ |+
T Consensus 81 --------------------------~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~ 132 (285)
T 1ozn_A 81 --------------------------LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAA--LQ 132 (285)
T ss_dssp --------------------------TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT--CC
T ss_pred --------------------------CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcC--CC
Confidence 78888888897 88777899999999999999999999888999999977 99
Q ss_pred EEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcC
Q 046240 263 TLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSN 342 (763)
Q Consensus 263 ~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 342 (763)
+|++++|++++..+. .+..+++|++|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 133 ~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 210 (285)
T 1ozn_A 133 YLYLQDNALQALPDD--TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFA 210 (285)
T ss_dssp EEECCSSCCCCCCTT--TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEECCCCcccccCHh--HhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCC
Confidence 999999999966665 689999999999999999988778899999999999999999988899999999999999999
Q ss_pred CccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCcccCCC
Q 046240 343 NKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGLP 397 (763)
Q Consensus 343 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~~p 397 (763)
|+++++.+..+..+++|+.|++++|++++..+....+..+.......+...|..|
T Consensus 211 n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 211 NNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp SCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred CcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 9999988889999999999999999999876654333444555566677777665
No 305
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.7e-31 Score=282.18 Aligned_cols=273 Identities=18% Similarity=0.215 Sum_probs=178.9
Q ss_pred CCCCCCCCCcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCcccccc------cc
Q 046240 57 NWTSNTSVCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRID------LA 130 (763)
Q Consensus 57 ~w~~~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~------~~ 130 (763)
+|.....|+.+..+.......+++.|++++|.+ .+|..+... |++|+|++|.+.. +.+|..++ .+
T Consensus 23 ~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~-----~~~~~~~~~~~~~~~~ 93 (312)
T 1wwl_A 23 DWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRA-----ARIPSRILFGALRVLG 93 (312)
T ss_dssp CGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEE-----EECBHHHHHHHHHHHT
T ss_pred chHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccC-----CCcCHHHHHHHHHhcC
Confidence 454333444454444333344566666666666 455544443 6666666666631 23333332 13
Q ss_pred CCCccEEEcccccccccCCCcc--cCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCccccccc
Q 046240 131 LPNVKALSLAYNRFSGTIQSPI--TNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLS 208 (763)
Q Consensus 131 l~~L~~L~L~~N~i~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~ 208 (763)
+++|++|+|++|+|++.+|..+ .++++|++|+|++|++++. |..|+++... ..+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~-----------------------~~~ 149 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQW-----------------------LKP 149 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTT-----------------------CCT
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHh-----------------------hcC
Confidence 5666666666666666666554 5666666666666666654 4444333100 003
Q ss_pred ccccEEEeecCccccccccccCCccccceeecccccccCC--CCccc--cccCCCCccEEEecCCccccC--CCCccccc
Q 046240 209 ISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGP--IPVTF--GRLQNSKLDTLSLCGNSFSGS--IPSCIDIG 282 (763)
Q Consensus 209 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~~l~~~~L~~L~L~~N~l~~~--~p~~~~~~ 282 (763)
+|++|+|++|++++..|..|+.+++|++|+|++|++.+. .|..+ ..+++ |++|+|++|++++. ++. ..+.
T Consensus 150 -~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~-~~~~ 225 (312)
T 1wwl_A 150 -GLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPT--LQVLALRNAGMETPSGVCS-ALAA 225 (312)
T ss_dssp -TCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTT--CCEEECTTSCCCCHHHHHH-HHHH
T ss_pred -CCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCC--CCEEECCCCcCcchHHHHH-HHHh
Confidence 788888888888877778888888888888888887654 23333 66655 88888888888721 111 0245
Q ss_pred cCCcccEEEcccccccccCC-cccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCce
Q 046240 283 NLKVVVEINLSRNNFSGDIP-ATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKK 361 (763)
Q Consensus 283 ~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 361 (763)
++++|++|+|++|++++..| ..+..+++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 226 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~ 300 (312)
T 1wwl_A 226 ARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGN 300 (312)
T ss_dssp TTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEE
T ss_pred cCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCE
Confidence 67888888888888887665 55667888899999999888 6676665 8899999999999886 54 888889999
Q ss_pred EEcccccCCC
Q 046240 362 LNLSFNKLEG 371 (763)
Q Consensus 362 L~l~~N~l~~ 371 (763)
|++++|++++
T Consensus 301 L~L~~N~l~~ 310 (312)
T 1wwl_A 301 LSLKGNPFLD 310 (312)
T ss_dssp EECTTCTTTC
T ss_pred EeccCCCCCC
Confidence 9999998875
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.3e-29 Score=266.18 Aligned_cols=277 Identities=18% Similarity=0.246 Sum_probs=179.6
Q ss_pred CCCCcccccCCCC--CCCCCcccceeecCCCCceEEEEecCCCCCCc----CCccc--CCCCCCCEEEcCCCcccCCCcc
Q 046240 48 YDPTNLLAQNWTS--NTSVCNWIGITCDVNSHRVTALNISSLNLQGE----IPHEI--GYLPSLTKLALGYNSLVGNNSL 119 (763)
Q Consensus 48 ~~~~~~~~~~w~~--~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~----~~~~~--~~l~~L~~L~L~~n~l~~~~~~ 119 (763)
.|+...+. .|.. ..++|.|.+..|....... .-+...|. ++..+ ...+++++|+|++|.++
T Consensus 26 ~~~~~aLl-~~k~~~~~~~~~~~~~w~~~~~~~~-----~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~----- 94 (328)
T 4fcg_A 26 RPYHDVLS-QWQRHYNADRNRWHSAWRQANSNNP-----QIETRTGRALKATADLLEDATQPGRVALELRSVPLP----- 94 (328)
T ss_dssp CCHHHHHH-HHHHHHHHCCTTHHHHHHHHTTTCT-----TSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-----
T ss_pred chHHHHHH-HHHHhccCCchhhhhhhcccccccc-----cccccCCcchhhhHHHHhcccccceeEEEccCCCch-----
Confidence 35555565 6864 3578999999884322100 01111111 11111 12345555555555553
Q ss_pred ccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCccccc
Q 046240 120 SGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGI 199 (763)
Q Consensus 120 ~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~ 199 (763)
.+|..++ .+++|++|+|++|.|+ .+|..|.++++|++|+|++|+++ .+|..|++++
T Consensus 95 --~lp~~l~-~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~------------------- 150 (328)
T 4fcg_A 95 --QFPDQAF-RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLN------------------- 150 (328)
T ss_dssp --SCCSCGG-GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCT-------------------
T ss_pred --hcChhhh-hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCc-------------------
Confidence 4554444 3555555555555555 44455555555555555555554 3343333333
Q ss_pred CCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCcc
Q 046240 200 LPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCI 279 (763)
Q Consensus 200 ~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~ 279 (763)
+|++|+|++|++.+.+|..+... ..+..+.++++ |++|+|++|+++ .+|.
T Consensus 151 ----------~L~~L~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~--L~~L~L~~n~l~-~lp~-- 200 (328)
T 4fcg_A 151 ----------RLRELSIRACPELTELPEPLAST---------------DASGEHQGLVN--LQSLRLEWTGIR-SLPA-- 200 (328)
T ss_dssp ----------TCCEEEEEEETTCCCCCSCSEEE---------------C-CCCEEESTT--CCEEEEEEECCC-CCCG--
T ss_pred ----------CCCEEECCCCCCccccChhHhhc---------------cchhhhccCCC--CCEEECcCCCcC-cchH--
Confidence 44455555544444444433320 11122444654 778888888777 6776
Q ss_pred ccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccC
Q 046240 280 DIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYL 359 (763)
Q Consensus 280 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 359 (763)
.+.++++|++|+|++|++++ +|..++.+++|+.|+|++|++.+.+|..++.+++|++|+|++|++.+.+|..+..+++|
T Consensus 201 ~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 279 (328)
T 4fcg_A 201 SIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQL 279 (328)
T ss_dssp GGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTC
T ss_pred hhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCC
Confidence 68888999999999999995 67789999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEcccccCCCCCCCC-CCccccccccccCC
Q 046240 360 KKLNLSFNKLEGEIPRG-GPFANFTAKSFMGN 390 (763)
Q Consensus 360 ~~L~l~~N~l~~~~p~~-~~~~~l~~~~~~~n 390 (763)
+.|+|++|++.+.+|.. +.++.+..+.+..|
T Consensus 280 ~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 280 EKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp CEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred CEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 99999999999999965 44555555554433
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.5e-31 Score=280.85 Aligned_cols=226 Identities=18% Similarity=0.260 Sum_probs=166.2
Q ss_pred ceEEEEecCCCC-CCcCCcccC-------CCCCCCEEEcCCCcccCCCccccCcccccc-ccCCCccEEEcccccccccC
Q 046240 78 RVTALNISSLNL-QGEIPHEIG-------YLPSLTKLALGYNSLVGNNSLSGSLPSRID-LALPNVKALSLAYNRFSGTI 148 (763)
Q Consensus 78 ~v~~L~L~~~~l-~~~~~~~~~-------~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~-~~l~~L~~L~L~~N~i~~~~ 148 (763)
.++.|+|++|.+ .+.+|..+. ++++|++|+|++|.++ +.+|..+| ..+++|++|+|++|+|++.
T Consensus 64 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~------~~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 136 (312)
T 1wwl_A 64 IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVT------GTAPPPLLEATGPDLNILNLRNVSWATR- 136 (312)
T ss_dssp HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCB------SCCCCCSSSCCSCCCSEEEEESCBCSSS-
T ss_pred HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCccc------chhHHHHHHhcCCCccEEEccCCCCcch-
Confidence 388999999999 456777766 8999999999999986 58888875 7899999999999999987
Q ss_pred CCcccCC-----CCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCcccc
Q 046240 149 QSPITNA-----SKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITG 223 (763)
Q Consensus 149 p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~ 223 (763)
|..+.++ ++|++|+|++|+|++..|..|+++++|+.|+ |++|++.+
T Consensus 137 ~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~-----------------------------Ls~N~l~~ 187 (312)
T 1wwl_A 137 DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLD-----------------------------LSDNPELG 187 (312)
T ss_dssp SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEE-----------------------------CCSCTTCH
T ss_pred hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEE-----------------------------CCCCCcCc
Confidence 8888887 9999999999999988888888877555554 44444443
Q ss_pred c--ccccc--CCccccceeecccccccCC--CC-ccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEccccc
Q 046240 224 N--IPQVM--GNLSIFLLLDLELNKLTGP--IP-VTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNN 296 (763)
Q Consensus 224 ~--~~~~~--~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~ 296 (763)
. .+..+ ..+++|++|+|++|+|++. ++ ..+.++++ |++|+|++|++++.+|.. .+..+++|++|+|++|+
T Consensus 188 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~--L~~L~Ls~N~l~~~~~~~-~~~~l~~L~~L~Ls~N~ 264 (312)
T 1wwl_A 188 ERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQ--LQGLDLSHNSLRDAAGAP-SCDWPSQLNSLNLSFTG 264 (312)
T ss_dssp HHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCC--CSEEECTTSCCCSSCCCS-CCCCCTTCCEEECTTSC
T ss_pred chHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCC--CCEEECCCCcCCcccchh-hhhhcCCCCEEECCCCc
Confidence 2 12222 5566666666666666521 11 22334444 777777777776555321 35566778888888888
Q ss_pred ccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCC
Q 046240 297 FSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISG 347 (763)
Q Consensus 297 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 347 (763)
|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 265 l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 265 LK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 87 5666665 7788888888888855 55 7788888888888888875
No 308
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=8.2e-29 Score=275.00 Aligned_cols=255 Identities=20% Similarity=0.203 Sum_probs=163.5
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.++++|+|++|.+++. | .|+.+++|++|+|++|.++ .+| +..+++|++|+|++|+|++. + +++++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~-------~~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l~ 106 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNIT-------TLD---LSQNTNLTYLACDSNKLTNL-D--VTPLT 106 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCS-------CCC---CTTCTTCSEEECCSSCCSCC-C--CTTCT
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCC-------eEc---cccCCCCCEEECcCCCCcee-e--cCCCC
Confidence 5677777777777753 4 5777777777777777775 343 34677777777777777764 2 67777
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL 236 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 236 (763)
+|++|+|++|+++++ | ++++++|++|+ +++|++++. + +.++. +|++|++++|+..+.+ .++.+++|+
T Consensus 107 ~L~~L~L~~N~l~~l-~--~~~l~~L~~L~----l~~N~l~~l-~--l~~l~-~L~~L~l~~n~~~~~~--~~~~l~~L~ 173 (457)
T 3bz5_A 107 KLTYLNCDTNKLTKL-D--VSQNPLLTYLN----CARNTLTEI-D--VSHNT-QLTELDCHLNKKITKL--DVTPQTQLT 173 (457)
T ss_dssp TCCEEECCSSCCSCC-C--CTTCTTCCEEE----CTTSCCSCC-C--CTTCT-TCCEEECTTCSCCCCC--CCTTCTTCC
T ss_pred cCCEEECCCCcCCee-c--CCCCCcCCEEE----CCCCcccee-c--cccCC-cCCEEECCCCCccccc--ccccCCcCC
Confidence 777777777777763 3 67777777777 667777763 2 55555 6777777777544444 366677777
Q ss_pred eeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEc
Q 046240 237 LLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISL 316 (763)
Q Consensus 237 ~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 316 (763)
+|++++|++++ +| +..+++ |+.|++++|++++. .+..+++|++|++++|++++ +| ++.+++|+.|++
T Consensus 174 ~L~ls~n~l~~-l~--l~~l~~--L~~L~l~~N~l~~~-----~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 174 TLDCSFNKITE-LD--VSQNKL--LNRLNCDTNNITKL-----DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp EEECCSSCCCC-CC--CTTCTT--CCEEECCSSCCSCC-----CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred EEECCCCccce-ec--cccCCC--CCEEECcCCcCCee-----ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 77777777775 33 555544 77777777777643 25666777777777777775 34 666677777777
Q ss_pred cCccccCcccccccccc-------cccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCC
Q 046240 317 PYNRLEGPIPESFGYLT-------SLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIP 374 (763)
Q Consensus 317 s~N~l~~~~p~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 374 (763)
++|++++..+..+..++ +|+.|++++|++.+.+| +..+++|+.|++++|++.+.+|
T Consensus 241 ~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 241 SVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp CSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred eCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceec
Confidence 77777765544444443 34455555555444443 3445566666666666555554
No 309
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=1.4e-28 Score=273.03 Aligned_cols=275 Identities=19% Similarity=0.131 Sum_probs=219.5
Q ss_pred CCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccC
Q 046240 75 NSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITN 154 (763)
Q Consensus 75 ~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~ 154 (763)
...++++|+|++|++++. | ++.+++|++|+|++|.++ .+| +.++++|++|+|++|++++. | +++
T Consensus 62 ~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~-------~~~---~~~l~~L~~L~L~~N~l~~l-~--~~~ 125 (457)
T 3bz5_A 62 KLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLT-------NLD---VTPLTKLTYLNCDTNKLTKL-D--VSQ 125 (457)
T ss_dssp GCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCS-------CCC---CTTCTTCCEEECCSSCCSCC-C--CTT
T ss_pred ccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCc-------eee---cCCCCcCCEEECCCCcCCee-c--CCC
Confidence 356899999999999974 4 999999999999999996 344 45899999999999999974 4 899
Q ss_pred CCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccc
Q 046240 155 ASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSI 234 (763)
Q Consensus 155 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~ 234 (763)
+++|++|++++|+|+++ + ++++++|+.|+ +++|+..+.+ .+..++ +|++|++++|++++ +| ++.+++
T Consensus 126 l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~----l~~n~~~~~~--~~~~l~-~L~~L~ls~n~l~~-l~--l~~l~~ 192 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEI-D--VSHNTQLTELD----CHLNKKITKL--DVTPQT-QLTTLDCSFNKITE-LD--VSQNKL 192 (457)
T ss_dssp CTTCCEEECTTSCCSCC-C--CTTCTTCCEEE----CTTCSCCCCC--CCTTCT-TCCEEECCSSCCCC-CC--CTTCTT
T ss_pred CCcCCEEECCCCcccee-c--cccCCcCCEEE----CCCCCccccc--ccccCC-cCCEEECCCCccce-ec--cccCCC
Confidence 99999999999999975 3 88999999999 7788666666 466777 99999999999996 44 888999
Q ss_pred cceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCc-----
Q 046240 235 FLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLK----- 309 (763)
Q Consensus 235 L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~----- 309 (763)
|+.|++++|++++. .+..+++ |++|++++|++++ +| +..+++|+.|++++|++++..+..+..++
T Consensus 193 L~~L~l~~N~l~~~---~l~~l~~--L~~L~Ls~N~l~~-ip----~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~ 262 (457)
T 3bz5_A 193 LNRLNCDTNNITKL---DLNQNIQ--LTFLDCSSNKLTE-ID----VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCI 262 (457)
T ss_dssp CCEEECCSSCCSCC---CCTTCTT--CSEEECCSSCCSC-CC----CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECT
T ss_pred CCEEECcCCcCCee---ccccCCC--CCEEECcCCcccc-cC----ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEecc
Confidence 99999999999965 3777766 9999999999996 44 66788999999999999987665555554
Q ss_pred --CccEEEccCccccCcccccccccccccEEeCcCCccCCccch--------hhhhhccCceEEcccccCCCCCCCCCCc
Q 046240 310 --DVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILI--------SLEKLLYLKKLNLSFNKLEGEIPRGGPF 379 (763)
Q Consensus 310 --~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~--------~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 379 (763)
+|+.|++++|.+.+.+| ++.+++|+.|+|++|++.+.+|. .+..+++|+.|++++|++++. + ...+
T Consensus 263 ~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~-l~~l 338 (457)
T 3bz5_A 263 QTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D-VSHN 338 (457)
T ss_dssp TCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C-CTTC
T ss_pred CCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c-cccC
Confidence 55666777776666665 46778888888888876665543 245557788888888888884 3 4556
Q ss_pred cccccccccCCCc
Q 046240 380 ANFTAKSFMGNEK 392 (763)
Q Consensus 380 ~~l~~~~~~~n~~ 392 (763)
+.+..+++.+|..
T Consensus 339 ~~L~~L~l~~N~l 351 (457)
T 3bz5_A 339 TKLKSLSCVNAHI 351 (457)
T ss_dssp TTCSEEECCSSCC
T ss_pred CcCcEEECCCCCC
Confidence 7777787777753
No 310
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.9e-30 Score=274.86 Aligned_cols=270 Identities=20% Similarity=0.190 Sum_probs=226.9
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.++++.+.+...++..+..+++|++|+|++|.++ .+++..+..+++|++|+|++|.+++..+ |.+++
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~-------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~ 80 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLS-------QISAADLAPFTKLELLNLSSNVLYETLD--LESLS 80 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCC-------CCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCT
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccC-------cCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcC
Confidence 45777788888887666667778889999999999885 6666667789999999999999987665 88999
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL 236 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 236 (763)
+|++|+|++|+|+++.+ .++|+.|+ +++|++++..+.. +. +|++|++++|++++..+..|+.+++|+
T Consensus 81 ~L~~L~Ls~n~l~~l~~-----~~~L~~L~----l~~n~l~~~~~~~---~~-~L~~L~l~~N~l~~~~~~~~~~l~~L~ 147 (317)
T 3o53_A 81 TLRTLDLNNNYVQELLV-----GPSIETLH----AANNNISRVSCSR---GQ-GKKNIYLANNKITMLRDLDEGCRSRVQ 147 (317)
T ss_dssp TCCEEECCSSEEEEEEE-----CTTCCEEE----CCSSCCSEEEECC---CS-SCEEEECCSSCCCSGGGBCTGGGSSEE
T ss_pred CCCEEECcCCccccccC-----CCCcCEEE----CCCCccCCcCccc---cC-CCCEEECCCCCCCCccchhhhccCCCC
Confidence 99999999999986543 37888888 8899988776554 33 899999999999998888999999999
Q ss_pred eeecccccccCCCCcccc-ccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEE
Q 046240 237 LLDLELNKLTGPIPVTFG-RLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNIS 315 (763)
Q Consensus 237 ~L~L~~N~l~~~~p~~~~-~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 315 (763)
+|+|++|++++..|..+. .+++ |++|+|++|.+++. |. ...+++|++|+|++|++++ +|..+..+++|+.|+
T Consensus 148 ~L~Ls~N~l~~~~~~~~~~~l~~--L~~L~L~~N~l~~~-~~---~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 148 YLDLKLNEIDTVNFAELAASSDT--LEHLNLQYNFIYDV-KG---QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (317)
T ss_dssp EEECTTSCCCEEEGGGGGGGTTT--CCEEECTTSCCCEE-EC---CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred EEECCCCCCCcccHHHHhhccCc--CCEEECCCCcCccc-cc---ccccccCCEEECCCCcCCc-chhhhcccCcccEEE
Confidence 999999999987777764 6665 99999999999854 43 3458999999999999995 455699999999999
Q ss_pred ccCccccCcccccccccccccEEeCcCCccC-CccchhhhhhccCceEEcc-cccCCCCCCCC
Q 046240 316 LPYNRLEGPIPESFGYLTSLEILDLSNNKIS-GFILISLEKLLYLKKLNLS-FNKLEGEIPRG 376 (763)
Q Consensus 316 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~-~N~l~~~~p~~ 376 (763)
|++|+++ .+|..+..+++|+.|+|++|+++ +..+..+..+++|+.|+++ .+.+++..|..
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 9999999 57888999999999999999999 7788899999999999999 44577766543
No 311
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2e-28 Score=279.91 Aligned_cols=283 Identities=21% Similarity=0.262 Sum_probs=183.3
Q ss_pred CCcccccCCCCCCCCCcccceeec------CCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCc
Q 046240 50 PTNLLAQNWTSNTSVCNWIGITCD------VNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSL 123 (763)
Q Consensus 50 ~~~~~~~~w~~~~~~c~w~gv~c~------~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l 123 (763)
....++ .|..+.++|.|.|..|. ....+++.|++++|+|+ .+|..+. ++|++|+|++|.|+ .+
T Consensus 8 ~~~~w~-~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-------~l 76 (622)
T 3g06_A 8 YDAVWS-AWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-------SL 76 (622)
T ss_dssp --CHHH-HHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-------CC
T ss_pred HHHHHH-HHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-------CC
Confidence 344455 68877889999664321 11245899999999999 7787776 89999999999986 67
Q ss_pred cccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcc
Q 046240 124 PSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSS 203 (763)
Q Consensus 124 p~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~ 203 (763)
|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|+++ |. .+++|+.|+ +++|++++ +|..
T Consensus 77 p~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~----L~~N~l~~-lp~~ 139 (622)
T 3g06_A 77 PA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLW----IFGNQLTS-LPVL 139 (622)
T ss_dssp CC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEE----CCSSCCSC-CCCC
T ss_pred CC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEE----CCCCCCCc-CCCC
Confidence 76 47899999999999985 444 678899999999999864 43 567777777 78888876 4543
Q ss_pred cccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCcccccc
Q 046240 204 IVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGN 283 (763)
Q Consensus 204 ~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~ 283 (763)
+ + +|++|+|++|+|++ +|. .+++|+.|++++|+|++ +| ..+++ |+.|++++|++++ +|. .
T Consensus 140 l---~-~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~--L~~L~Ls~N~l~~-l~~--~--- 199 (622)
T 3g06_A 140 P---P-GLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSG--LQELSVSDNQLAS-LPT--L--- 199 (622)
T ss_dssp C---T-TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTT--CCEEECCSSCCSC-CCC--C---
T ss_pred C---C-CCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCC--CcEEECCCCCCCC-CCC--c---
Confidence 3 3 88899999998885 343 23566777777777773 44 22332 6777777777763 443 1
Q ss_pred CCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEE
Q 046240 284 LKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLN 363 (763)
Q Consensus 284 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 363 (763)
+++|+.|++++|.++. +|.. +++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+.+++ .+++|+.|+
T Consensus 200 ~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~ 267 (622)
T 3g06_A 200 PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM----LPSGLLSLS 267 (622)
T ss_dssp CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEE
T ss_pred cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc----ccccCcEEe
Confidence 2455666666666652 3322 3556666666666653 33 234556666666666655332 345566666
Q ss_pred cccccCCCCCCCCCCccccccccccCCCc
Q 046240 364 LSFNKLEGEIPRGGPFANFTAKSFMGNEK 392 (763)
Q Consensus 364 l~~N~l~~~~p~~~~~~~l~~~~~~~n~~ 392 (763)
|++|+|+..++....++++..+++.+|+.
T Consensus 268 Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 268 VYRNQLTRLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp CCSSCCCSCCGGGGGSCTTCEEECCSCCC
T ss_pred CCCCCCCcCCHHHhhccccCEEEecCCCC
Confidence 66666663322223445555555555544
No 312
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=1.5e-27 Score=246.43 Aligned_cols=218 Identities=22% Similarity=0.298 Sum_probs=165.5
Q ss_pred CCCCcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEccc
Q 046240 62 TSVCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAY 141 (763)
Q Consensus 62 ~~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~ 141 (763)
.++|.|.|+.|... .+++.+++++++++ .+|..+. ++|++|+|++|.++ .+|...|.++++|++|+|++
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~-------~~~~~~~~~l~~L~~L~l~~ 70 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLS-------SLPSKAFHRLTKLRLLYLND 70 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCS-------CCCTTSSSSCTTCCEEECCS
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCC-------eeCHHHhcCCCCCCEEECCC
Confidence 47999999999643 45778999999999 4676554 67888888888885 67776777888888888888
Q ss_pred ccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCcc
Q 046240 142 NRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSI 221 (763)
Q Consensus 142 N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l 221 (763)
|.|+.+.+..|.++++|++|+|++|+++++.+..|.+++ +|++|+|++|++
T Consensus 71 n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-----------------------------~L~~L~l~~n~l 121 (270)
T 2o6q_A 71 NKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLV-----------------------------NLAELRLDRNQL 121 (270)
T ss_dssp SCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCS-----------------------------SCCEEECCSSCC
T ss_pred CccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHccccc-----------------------------CCCEEECCCCcc
Confidence 888877667778888888888888888866666666555 566666666777
Q ss_pred ccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccC
Q 046240 222 TGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDI 301 (763)
Q Consensus 222 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~ 301 (763)
++..+..|..+++|++|+|++|++++..+..|..+++ |++|+|++|++++..+. .+.++++|++|+|++|++++..
T Consensus 122 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~--L~~L~L~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 122 KSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTS--LKELRLYNNQLKRVPEG--AFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT--CCEEECCSSCCSCCCTT--TTTTCTTCCEEECCSSCCSCCC
T ss_pred CeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcc--cceeEecCCcCcEeChh--HhccCCCcCEEECCCCcCCcCC
Confidence 6666666777777777777777777655555666655 77777777777755554 5777888888888888888766
Q ss_pred CcccCCCcCccEEEccCccccC
Q 046240 302 PATIGGLKDVQNISLPYNRLEG 323 (763)
Q Consensus 302 p~~~~~l~~L~~L~Ls~N~l~~ 323 (763)
+..|..+++|+.|+|++|.+..
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCC
T ss_pred HHHhccccCCCEEEecCCCeeC
Confidence 6778888888888888888764
No 313
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=9.5e-29 Score=276.97 Aligned_cols=244 Identities=21% Similarity=0.167 Sum_probs=200.0
Q ss_pred CCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCccccccccc
Q 046240 131 LPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSIS 210 (763)
Q Consensus 131 l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~ 210 (763)
.++|++|+|++|.|++..|..|.++++|++|+|++|+|++..| |+++++|++|+ +++|.+++..+. + +
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~----Ls~N~l~~l~~~-----~-~ 100 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLD----LNNNYVQELLVG-----P-S 100 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEE----CCSSEEEEEEEC-----T-T
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEE----ecCCcCCCCCCC-----C-C
Confidence 4489999999999998888899999999999999999987766 99999999999 889988865432 3 8
Q ss_pred ccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccc-cCCcccE
Q 046240 211 LERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIG-NLKVVVE 289 (763)
Q Consensus 211 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~-~l~~L~~ 289 (763)
|++|+|++|.|++..+.. +++|+.|+|++|.+++..|..+.++++ |++|+|++|.+++.+|. .+. .+++|+.
T Consensus 101 L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~~~~~~--~l~~~l~~L~~ 173 (487)
T 3oja_A 101 IETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSR--VQYLDLKLNEIDTVNFA--ELAASSDTLEH 173 (487)
T ss_dssp CCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSS--EEEEECTTSCCCEEEGG--GGGGGTTTCCE
T ss_pred cCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCC--CCEEECCCCCCCCcChH--HHhhhCCcccE
Confidence 999999999999877654 578999999999999888888888876 99999999999987776 554 7899999
Q ss_pred EEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccC
Q 046240 290 INLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKL 369 (763)
Q Consensus 290 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 369 (763)
|+|++|.|++..+ +..+++|+.|+|++|++++.+| .+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|++
T Consensus 174 L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l 249 (487)
T 3oja_A 174 LNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGF 249 (487)
T ss_dssp EECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCB
T ss_pred EecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCC
Confidence 9999999987633 4468999999999999996444 58899999999999999997 566788889999999999999
Q ss_pred C-CCCCC-CCCcccccccccc-------CCCcccCCC
Q 046240 370 E-GEIPR-GGPFANFTAKSFM-------GNEKLCGLP 397 (763)
Q Consensus 370 ~-~~~p~-~~~~~~l~~~~~~-------~n~~~c~~p 397 (763)
+ +.+|. ...++.+..+.+. .|+..|.++
T Consensus 250 ~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 250 HCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp CHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred cCcchHHHHHhCCCCcEEeccccccccCCCcccccCC
Confidence 8 33332 2445555555554 677777776
No 314
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=3.3e-29 Score=284.60 Aligned_cols=185 Identities=17% Similarity=0.072 Sum_probs=131.1
Q ss_pred ecccCCceEEEE-EecCCceEEEEEeehh----------hHHHHHHHHHHHHHHHhC-CCCccceEEeeeecCCceEEEE
Q 046240 483 IGIGSFGYVYKA-ELDDGIEVAIKVFHQE----------CARAMKSFEVECEVMKNI-RHRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 483 lg~G~~g~v~~~-~~~~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 550 (763)
.+.|++|.+..+ +.--|+.+|+|++... .....+++.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 455666655554 2335789999999642 233456799999999999 7999999999999999999999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCC
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQ 630 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 630 (763)
||++|++|.+++...+ +++.. +|+.||++||+|+ |++|||||||||+|||+++++.+||+|||+|+.......
T Consensus 322 Eyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~yl---H~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAAL---EKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp ECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHH---HHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred ecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHH---HHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 9999999999998754 45543 5899999999999 889999999999999999999999999999987653322
Q ss_pred ccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCC
Q 046240 631 SMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPA 677 (763)
Q Consensus 631 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~ 677 (763)
.....+||+.|||||++.+ .+..++|+||+|++++++.++..|+
T Consensus 395 --~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 395 --WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred --cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 2344679999999999865 4677899999999998887765543
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.3e-29 Score=264.36 Aligned_cols=261 Identities=20% Similarity=0.125 Sum_probs=218.0
Q ss_pred CCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCch
Q 046240 103 LTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNI 182 (763)
Q Consensus 103 L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 182 (763)
++.++++.+.+. .++..++..+++|++|+|++|.|++..|..|.++++|++|+|++|++++..+ |.++++|
T Consensus 12 l~i~~ls~~~l~-------~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L 82 (317)
T 3o53_A 12 YKIEKVTDSSLK-------QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTL 82 (317)
T ss_dssp EEEESCCTTTHH-------HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTC
T ss_pred eeEeeccccchh-------hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCC
Confidence 445667777663 6677777788999999999999999888999999999999999999997765 9999999
Q ss_pred hhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCcc
Q 046240 183 EWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLD 262 (763)
Q Consensus 183 ~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~ 262 (763)
++|+ +++|++++..+ .+ +|++|++++|++++..+.. +++|++|++++|++++..|..+..+++ |+
T Consensus 83 ~~L~----Ls~n~l~~l~~-----~~-~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~--L~ 147 (317)
T 3o53_A 83 RTLD----LNNNYVQELLV-----GP-SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSR--VQ 147 (317)
T ss_dssp CEEE----CCSSEEEEEEE-----CT-TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSS--EE
T ss_pred CEEE----CcCCccccccC-----CC-CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCC--CC
Confidence 9999 88999886432 24 9999999999999877655 578999999999999888888998876 99
Q ss_pred EEEecCCccccCCCCcccc-ccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCc
Q 046240 263 TLSLCGNSFSGSIPSCIDI-GNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLS 341 (763)
Q Consensus 263 ~L~L~~N~l~~~~p~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 341 (763)
+|+|++|.+++..|. .+ ..+++|++|+|++|++++. | ....+++|+.|+|++|++++ +|..+..+++|+.|+|+
T Consensus 148 ~L~Ls~N~l~~~~~~--~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~ 222 (317)
T 3o53_A 148 YLDLKLNEIDTVNFA--ELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLR 222 (317)
T ss_dssp EEECTTSCCCEEEGG--GGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECT
T ss_pred EEECCCCCCCcccHH--HHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECc
Confidence 999999999976666 44 4789999999999999966 3 34458999999999999995 55559999999999999
Q ss_pred CCccCCccchhhhhhccCceEEcccccCC-CCCCCC-CCccccccccccCCCcc
Q 046240 342 NNKISGFILISLEKLLYLKKLNLSFNKLE-GEIPRG-GPFANFTAKSFMGNEKL 393 (763)
Q Consensus 342 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~-~~~~~l~~~~~~~n~~~ 393 (763)
+|+|+. +|..+..+++|+.|++++|+++ +.+|.. ..++.+..+++.+++.+
T Consensus 223 ~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l 275 (317)
T 3o53_A 223 NNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKL 275 (317)
T ss_dssp TSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhc
Confidence 999997 5777899999999999999998 433332 44556666666644333
No 316
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=7e-27 Score=259.24 Aligned_cols=268 Identities=22% Similarity=0.320 Sum_probs=161.5
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|++++|++++ +|.. .++|++|+|++|+++ .+|. +.++++|++|++++|++++ +|..+ .
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~-------~lp~--~~~l~~L~~L~l~~N~l~~-lp~~~---~ 173 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLE-------KLPE--LQNSSFLKIIDVDNNSLKK-LPDLP---P 173 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCS-------SCCC--CTTCTTCCEEECCSSCCSC-CCCCC---T
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCC-------CCcc--cCCCCCCCEEECCCCcCcc-cCCCc---c
Confidence 355566666665553 2211 157777888777775 4662 4577777777777777775 44433 4
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL 236 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 236 (763)
+|++|++++|++++ +| .|+++++|+.|+ +++|++++ +|... .+|++|++++|+++ .+| .++.+++|+
T Consensus 174 ~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~----l~~N~l~~-l~~~~----~~L~~L~l~~n~l~-~lp-~~~~l~~L~ 240 (454)
T 1jl5_A 174 SLEFIAAGNNQLEE-LP-ELQNLPFLTAIY----ADNNSLKK-LPDLP----LSLESIVAGNNILE-ELP-ELQNLPFLT 240 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEE----CCSSCCSS-CCCCC----TTCCEEECCSSCCS-SCC-CCTTCTTCC
T ss_pred cccEEECcCCcCCc-Cc-cccCCCCCCEEE----CCCCcCCc-CCCCc----CcccEEECcCCcCC-ccc-ccCCCCCCC
Confidence 77777777777776 44 577777777777 66777765 33322 26777777777777 455 377777777
Q ss_pred eeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccc--cCCcc----------
Q 046240 237 LLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSG--DIPAT---------- 304 (763)
Q Consensus 237 ~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~---------- 304 (763)
+|++++|++++ +|..+ . +|+.|++++|++++ +|. . .++|++|++++|++++ ..|..
T Consensus 241 ~L~l~~N~l~~-l~~~~---~--~L~~L~l~~N~l~~-l~~--~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~ 308 (454)
T 1jl5_A 241 TIYADNNLLKT-LPDLP---P--SLEALNVRDNYLTD-LPE--L---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNE 308 (454)
T ss_dssp EEECCSSCCSS-CCSCC---T--TCCEEECCSSCCSC-CCC--C---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSC
T ss_pred EEECCCCcCCc-ccccc---c--ccCEEECCCCcccc-cCc--c---cCcCCEEECcCCccCcccCcCCcCCEEECcCCc
Confidence 77777777774 44322 2 26666666666663 443 1 2445555555555544 12211
Q ss_pred ---cCCC-cCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCC--CCCCC-C
Q 046240 305 ---IGGL-KDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEG--EIPRG-G 377 (763)
Q Consensus 305 ---~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~-~ 377 (763)
+..+ ++|+.|++++|++++ +|.. +++|+.|++++|+++++ |. .+++|+.|++++|++++ .+|.. +
T Consensus 309 l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~l-p~---~l~~L~~L~L~~N~l~~l~~ip~~l~ 380 (454)
T 1jl5_A 309 IRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEV-PE---LPQNLKQLHVEYNPLREFPDIPESVE 380 (454)
T ss_dssp CSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSSCCCCCTTCC
T ss_pred CCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccccc-cc---hhhhccEEECCCCCCCcCCCChHHHH
Confidence 1123 578888888888885 5543 58899999999999874 43 46889999999999988 55543 2
Q ss_pred Cc-------------cccccccccCCCccc
Q 046240 378 PF-------------ANFTAKSFMGNEKLC 394 (763)
Q Consensus 378 ~~-------------~~l~~~~~~~n~~~c 394 (763)
.+ +.++.+++.+|+...
T Consensus 381 ~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 381 DLRMNSHLAEVPELPQNLKQLHVETNPLRE 410 (454)
T ss_dssp EEECCC------------------------
T ss_pred hhhhcccccccccccCcCCEEECCCCcCCc
Confidence 23 567778888886543
No 317
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=5.4e-26 Score=252.12 Aligned_cols=263 Identities=24% Similarity=0.324 Sum_probs=165.4
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|++++|.+++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|++++ +| .|.+++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-------~l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~ 153 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-------ALSDL----PPLLEYLGVSNNQLEK-LP-ELQNSS 153 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-------CCCSC----CTTCCEEECCSSCCSS-CC-CCTTCT
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-------cccCC----CCCCCEEECcCCCCCC-Cc-ccCCCC
Confidence 467777777777775 5543 367777777777775 33321 1577888888888875 55 477788
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL 236 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 236 (763)
+|++|++++|++++ +|..+ ++|++|+ +++|++++ +| ++.+++ +|++|++++|++++ +|... ++|+
T Consensus 154 ~L~~L~l~~N~l~~-lp~~~---~~L~~L~----L~~n~l~~-l~-~~~~l~-~L~~L~l~~N~l~~-l~~~~---~~L~ 218 (454)
T 1jl5_A 154 FLKIIDVDNNSLKK-LPDLP---PSLEFIA----AGNNQLEE-LP-ELQNLP-FLTAIYADNNSLKK-LPDLP---LSLE 218 (454)
T ss_dssp TCCEEECCSSCCSC-CCCCC---TTCCEEE----CCSSCCSS-CC-CCTTCT-TCCEEECCSSCCSS-CCCCC---TTCC
T ss_pred CCCEEECCCCcCcc-cCCCc---ccccEEE----CcCCcCCc-Cc-cccCCC-CCCEEECCCCcCCc-CCCCc---Cccc
Confidence 88888888888775 45443 3666666 77777776 45 577776 78888888888775 33322 4778
Q ss_pred eeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEc
Q 046240 237 LLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISL 316 (763)
Q Consensus 237 ~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 316 (763)
+|++++|+++ .+|. +..+++ |++|++++|++++ +|. . +++|+.|++++|++++ +|.. +++|+.|++
T Consensus 219 ~L~l~~n~l~-~lp~-~~~l~~--L~~L~l~~N~l~~-l~~--~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l 284 (454)
T 1jl5_A 219 SIVAGNNILE-ELPE-LQNLPF--LTTIYADNNLLKT-LPD--L---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDV 284 (454)
T ss_dssp EEECCSSCCS-SCCC-CTTCTT--CCEEECCSSCCSS-CCS--C---CTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred EEECcCCcCC-cccc-cCCCCC--CCEEECCCCcCCc-ccc--c---ccccCEEECCCCcccc-cCcc---cCcCCEEEC
Confidence 8888888887 5663 777765 8888888888874 554 1 3678888888888875 4443 367777888
Q ss_pred cCccccCc--cccccc-------------cc-ccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCcc
Q 046240 317 PYNRLEGP--IPESFG-------------YL-TSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFA 380 (763)
Q Consensus 317 s~N~l~~~--~p~~~~-------------~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 380 (763)
++|++++. .|..+. .+ ++|+.|++++|+++++ |.. +++|+.|++++|++++ +|. .+.
T Consensus 285 s~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~l-p~~---~~~L~~L~L~~N~l~~-lp~--~l~ 357 (454)
T 1jl5_A 285 SENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIEL-PAL---PPRLERLIASFNHLAE-VPE--LPQ 357 (454)
T ss_dssp CSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSC-CCC--CCT
T ss_pred cCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCccccc-ccc---CCcCCEEECCCCcccc-ccc--hhh
Confidence 88777752 221111 11 3455555555555542 221 3455555555555553 222 244
Q ss_pred ccccccccCCCc
Q 046240 381 NFTAKSFMGNEK 392 (763)
Q Consensus 381 ~l~~~~~~~n~~ 392 (763)
.++.+++.+|+.
T Consensus 358 ~L~~L~L~~N~l 369 (454)
T 1jl5_A 358 NLKQLHVEYNPL 369 (454)
T ss_dssp TCCEEECCSSCC
T ss_pred hccEEECCCCCC
Confidence 555555555543
No 318
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.3e-26 Score=240.22 Aligned_cols=210 Identities=21% Similarity=0.269 Sum_probs=112.8
Q ss_pred ccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccE
Q 046240 134 VKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLER 213 (763)
Q Consensus 134 L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~ 213 (763)
|++|+|++|+|++..+..|.++++|++|+|++|+++++.+..|.++++|++|+ +++|.+++..+..+.++. +|++
T Consensus 30 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~----L~~n~l~~~~~~~~~~l~-~L~~ 104 (276)
T 2z62_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLI----LTGNPIQSLALGAFSGLS-SLQK 104 (276)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEE----CTTCCCCEECTTTTTTCT-TCCE
T ss_pred ccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEE----CCCCccCccChhhhcCCc-cccE
Confidence 44444444444444444455555555555555555544444444433222222 222222222222222222 4445
Q ss_pred EEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcc
Q 046240 214 LYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLS 293 (763)
Q Consensus 214 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 293 (763)
|++++|++++..+..++.+++|++|+|++|++++. .+|. .+.++++|++|+|+
T Consensus 105 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------------------~l~~--~~~~l~~L~~L~Ls 157 (276)
T 2z62_A 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-------------------------KLPE--YFSNLTNLEHLDLS 157 (276)
T ss_dssp EECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-------------------------CCCG--GGGGCTTCCEEECC
T ss_pred EECCCCCccccCchhcccCCCCCEEECcCCcccee-------------------------cCch--hhccCCCCCEEECC
Confidence 55555555544444455555555555555555432 1344 45555566666666
Q ss_pred cccccccCCcccCCCcCcc----EEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccC
Q 046240 294 RNNFSGDIPATIGGLKDVQ----NISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKL 369 (763)
Q Consensus 294 ~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 369 (763)
+|++++..+..|..+++|+ .|++++|++++..+..+. ..+|+.|+|++|+++++++..|..+++|+.|++++|++
T Consensus 158 ~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 236 (276)
T 2z62_A 158 SNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 236 (276)
T ss_dssp SSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCB
T ss_pred CCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcc
Confidence 6666655555555555555 677777777754444443 34788888888888877777777888888888888888
Q ss_pred CCCCCCC
Q 046240 370 EGEIPRG 376 (763)
Q Consensus 370 ~~~~p~~ 376 (763)
++..|..
T Consensus 237 ~c~c~~l 243 (276)
T 2z62_A 237 DCSCPRI 243 (276)
T ss_dssp CCCTTTT
T ss_pred cccCCch
Confidence 8766543
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=8.3e-26 Score=234.19 Aligned_cols=225 Identities=23% Similarity=0.283 Sum_probs=163.4
Q ss_pred EEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCee
Q 046240 82 LNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTIL 161 (763)
Q Consensus 82 L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L 161 (763)
++..+.+++ .+|..+. ++|++|+|++|.++ .++...+.++++|++|+|++|+|++..+..|.++++|++|
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~-------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLR-------HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTL 81 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCC-------EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCccc-------ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEE
Confidence 344455565 4666554 57888999888885 6676666788889999999999888888888889999999
Q ss_pred eecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccc-cccccCCccccceeec
Q 046240 162 ELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGN-IPQVMGNLSIFLLLDL 240 (763)
Q Consensus 162 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L 240 (763)
+|++|++++..+..|.++++|++|+ +++|++.+..+..+.++. +|++|+|++|++++. +|..|..+++|++|+|
T Consensus 82 ~L~~n~l~~~~~~~~~~l~~L~~L~----l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~L 156 (276)
T 2z62_A 82 ILTGNPIQSLALGAFSGLSSLQKLV----AVETNLASLENFPIGHLK-TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDL 156 (276)
T ss_dssp ECTTCCCCEECTTTTTTCTTCCEEE----CTTSCCCCSTTCCCTTCT-TCCEEECCSSCCCCCCCCGGGGGCTTCCEEEC
T ss_pred ECCCCccCccChhhhcCCccccEEE----CCCCCccccCchhcccCC-CCCEEECcCCccceecCchhhccCCCCCEEEC
Confidence 9999999888888889999999888 778888887777788887 999999999999874 5889999999999999
Q ss_pred ccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCccc-EEEcccccccccCCcccCCCcCccEEEccCc
Q 046240 241 ELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVV-EINLSRNNFSGDIPATIGGLKDVQNISLPYN 319 (763)
Q Consensus 241 ~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 319 (763)
++|++++..+..+..+.+ |+ .|. .|++++|++++..+..+.. .+|+.|+|++|
T Consensus 157 s~N~l~~~~~~~~~~l~~--L~-----------------------~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n 210 (276)
T 2z62_A 157 SSNKIQSIYCTDLRVLHQ--MP-----------------------LLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTN 210 (276)
T ss_dssp CSSCCCEECGGGGHHHHT--CT-----------------------TCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSS
T ss_pred CCCCCCcCCHHHhhhhhh--cc-----------------------ccceeeecCCCcccccCccccCC-CcccEEECCCC
Confidence 999998766666665543 43 111 3444444444333333322 25556666666
Q ss_pred cccCcccccccccccccEEeCcCCccCC
Q 046240 320 RLEGPIPESFGYLTSLEILDLSNNKISG 347 (763)
Q Consensus 320 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 347 (763)
++++..+..|..+++|+.|+|++|+++.
T Consensus 211 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 211 QLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ceeecCHhHhcccccccEEEccCCcccc
Confidence 6654444455666666666666666664
No 320
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=2.3e-25 Score=254.54 Aligned_cols=242 Identities=26% Similarity=0.307 Sum_probs=203.9
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|.|+++ |. .++
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-------~lp~----~l~~L~~L~Ls~N~l~~l-~~---~l~ 121 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-------SLPV----LPPGLLELSIFSNPLTHL-PA---LPS 121 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-------CCCC----CCTTCCEEEECSCCCCCC-CC---CCT
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-------cCCC----CCCCCCEEECcCCcCCCC-CC---CCC
Confidence 58999999999999 5665 6799999999999996 6776 679999999999999964 44 678
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL 236 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 236 (763)
+|++|+|++|+|++ +|.. +++|++|+ +++|++++ +|..+ . +|+.|++++|+|++ +| ..+++|+
T Consensus 122 ~L~~L~L~~N~l~~-lp~~---l~~L~~L~----Ls~N~l~~-l~~~~---~-~L~~L~L~~N~l~~-l~---~~~~~L~ 184 (622)
T 3g06_A 122 GLCKLWIFGNQLTS-LPVL---PPGLQELS----VSDNQLAS-LPALP---S-ELCKLWAYNNQLTS-LP---MLPSGLQ 184 (622)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEE----CCSSCCSC-CCCCC---T-TCCEEECCSSCCSC-CC---CCCTTCC
T ss_pred CcCEEECCCCCCCc-CCCC---CCCCCEEE----CcCCcCCC-cCCcc---C-CCCEEECCCCCCCC-Cc---ccCCCCc
Confidence 99999999999996 5544 48888888 88999986 34422 3 89999999999995 55 5578999
Q ss_pred eeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEc
Q 046240 237 LLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISL 316 (763)
Q Consensus 237 ~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 316 (763)
.|+|++|+|++ +|..+ . +|+.|++++|.++ .+|. . +++|+.|+|++|+|++ +| ..+++|+.|+|
T Consensus 185 ~L~Ls~N~l~~-l~~~~---~--~L~~L~L~~N~l~-~l~~--~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~L 248 (622)
T 3g06_A 185 ELSVSDNQLAS-LPTLP---S--ELYKLWAYNNRLT-SLPA--L---PSGLKELIVSGNRLTS-LP---VLPSELKELMV 248 (622)
T ss_dssp EEECCSSCCSC-CCCCC---T--TCCEEECCSSCCS-SCCC--C---CTTCCEEECCSSCCSC-CC---CCCTTCCEEEC
T ss_pred EEECCCCCCCC-CCCcc---c--hhhEEECcCCccc-ccCC--C---CCCCCEEEccCCccCc-CC---CCCCcCcEEEC
Confidence 99999999995 55433 3 4999999999999 5665 2 4789999999999996 55 56689999999
Q ss_pred cCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCC
Q 046240 317 PYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPR 375 (763)
Q Consensus 317 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 375 (763)
++|+|+ .+|. .+++|+.|+|++|+|+. +|..+..+++|+.|+|++|++++.+|.
T Consensus 249 s~N~L~-~lp~---~~~~L~~L~Ls~N~L~~-lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 249 SGNRLT-SLPM---LPSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CSSCCS-CCCC---CCTTCCEEECCSSCCCS-CCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCCCCC-cCCc---ccccCcEEeCCCCCCCc-CCHHHhhccccCEEEecCCCCCCcCHH
Confidence 999999 4565 57899999999999996 578899999999999999999987764
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=3.8e-25 Score=228.39 Aligned_cols=136 Identities=23% Similarity=0.268 Sum_probs=76.9
Q ss_pred cccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccE
Q 046240 210 SLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVE 289 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~ 289 (763)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+.. +..+++|++
T Consensus 86 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~----------------------------~~~l~~L~~ 137 (270)
T 2o6q_A 86 NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRV----------------------------FDSLTKLTY 137 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTT----------------------------TTTCTTCCE
T ss_pred CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHH----------------------------hCcCcCCCE
Confidence 4555555555555444445555555555555555555433333 445555555
Q ss_pred EEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccC
Q 046240 290 INLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKL 369 (763)
Q Consensus 290 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 369 (763)
|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+++++.+..|..+++|+.|+|++|++
T Consensus 138 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 138 LSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 55555555544444455566666666666666655555566666666666666666665555566666666666666666
Q ss_pred CCCC
Q 046240 370 EGEI 373 (763)
Q Consensus 370 ~~~~ 373 (763)
.+..
T Consensus 218 ~c~c 221 (270)
T 2o6q_A 218 DCTC 221 (270)
T ss_dssp CCSS
T ss_pred eCCC
Confidence 5543
No 322
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=4.5e-25 Score=229.91 Aligned_cols=201 Identities=20% Similarity=0.191 Sum_probs=100.1
Q ss_pred cCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccc
Q 046240 130 ALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSI 209 (763)
Q Consensus 130 ~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~ 209 (763)
++++|+++++++|.++. +|..+. ++|++|+|++|+|++..+..|.+++
T Consensus 8 ~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~----------------------------- 55 (290)
T 1p9a_G 8 KVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYT----------------------------- 55 (290)
T ss_dssp CSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCT-----------------------------
T ss_pred ccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCC-----------------------------
Confidence 55566666666666663 333332 4556666666666555444444433
Q ss_pred cccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccE
Q 046240 210 SLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVE 289 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~ 289 (763)
+|++|+|++|+|++..+. +.+++|++|+|++|+|+ .+|..+..+++ |++|+|++|++++..|. .|.++++|++
T Consensus 56 ~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~--L~~L~l~~N~l~~l~~~--~~~~l~~L~~ 128 (290)
T 1p9a_G 56 RLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPA--LTVLDVSFNRLTSLPLG--ALRGLGELQE 128 (290)
T ss_dssp TCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTT--CCEEECCSSCCCCCCSS--TTTTCTTCCE
T ss_pred CCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCC--CCEEECCCCcCcccCHH--HHcCCCCCCE
Confidence 455555555555533322 45556666666666665 44444444443 55555555555533333 3445555555
Q ss_pred EEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccC
Q 046240 290 INLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKL 369 (763)
Q Consensus 290 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 369 (763)
|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+. +|..+..+.+|+.|+|++|++
T Consensus 129 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCB
T ss_pred EECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCc
Confidence 5555555554444444445555555555555554333344445555555555555543 233333334444444444444
Q ss_pred C
Q 046240 370 E 370 (763)
Q Consensus 370 ~ 370 (763)
.
T Consensus 208 ~ 208 (290)
T 1p9a_G 208 L 208 (290)
T ss_dssp C
T ss_pred c
Confidence 3
No 323
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.92 E-value=3.1e-28 Score=272.15 Aligned_cols=279 Identities=18% Similarity=0.161 Sum_probs=141.2
Q ss_pred ceEEEEecCCCCCC----cCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCC----CccEEEcccccccc---
Q 046240 78 RVTALNISSLNLQG----EIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALP----NVKALSLAYNRFSG--- 146 (763)
Q Consensus 78 ~v~~L~L~~~~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~----~L~~L~L~~N~i~~--- 146 (763)
+++.|+|++|+++. .++..+..+++|++|+|++|.+. +..+..++..++ +|++|+|++|+|+.
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~------~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~ 102 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG------DVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGC 102 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCH------HHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCC------hHHHHHHHHHHhhCCCceeEEEccCCCCCHHHH
Confidence 45566666666553 23445555566666666665553 112222333333 46666666666553
Q ss_pred -cCCCcccCCCCCCeeeecCcccccccccccC-----CCCchhhhhhhhhccCCcccccC----CcccccccccccEEEe
Q 046240 147 -TIQSPITNASKLTILELGGNSFSGFIPNTIG-----NLRNIEWLGLVIGLIGNPLNGIL----PSSIVNLSISLERLYI 216 (763)
Q Consensus 147 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~~l~~n~l~~~~----p~~~~~l~~~L~~L~L 216 (763)
.++..|.++++|++|+|++|++++..+..+. .+++|++|+ +++|.+++.. +..+..++ +|++|+|
T Consensus 103 ~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~----L~~n~l~~~~~~~l~~~l~~~~-~L~~L~L 177 (461)
T 1z7x_W 103 GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQ----LEYCSLSAASCEPLASVLRAKP-DFKELTV 177 (461)
T ss_dssp HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE----CTTSCCBGGGHHHHHHHHHHCT-TCCEEEC
T ss_pred HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEE----CCCCCCCHHHHHHHHHHHhhCC-CCCEEEC
Confidence 3355555666666666666665543332222 234455555 5555555432 33333334 5666666
Q ss_pred ecCccccccccccCC-----ccccceeecccccccCC----CCccccccCCCCccEEEecCCccccCC-----CCccccc
Q 046240 217 SNCSITGNIPQVMGN-----LSIFLLLDLELNKLTGP----IPVTFGRLQNSKLDTLSLCGNSFSGSI-----PSCIDIG 282 (763)
Q Consensus 217 ~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~----~p~~~~~l~~~~L~~L~L~~N~l~~~~-----p~~~~~~ 282 (763)
++|.++...+..+.. +++|++|+|++|.+++. ++..+..+++ |++|++++|.+++.. +. .+.
T Consensus 178 ~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~--L~~L~Ls~n~l~~~~~~~l~~~--~~~ 253 (461)
T 1z7x_W 178 SNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKAS--LRELALGSNKLGDVGMAELCPG--LLH 253 (461)
T ss_dssp CSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTT--CCEEECCSSBCHHHHHHHHHHH--HTS
T ss_pred cCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCC--ccEEeccCCcCChHHHHHHHHH--Hhc
Confidence 666655443333322 34566666666665542 3444444443 666666666554321 11 112
Q ss_pred cCCcccEEEccccccccc----CCcccCCCcCccEEEccCccccCccccccccc-----ccccEEeCcCCccCCc----c
Q 046240 283 NLKVVVEINLSRNNFSGD----IPATIGGLKDVQNISLPYNRLEGPIPESFGYL-----TSLEILDLSNNKISGF----I 349 (763)
Q Consensus 283 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~ 349 (763)
.+++|++|++++|+++.. ++..+..+++|+.|+|++|.+++..+..+... ++|++|+|++|.+++. .
T Consensus 254 ~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 333 (461)
T 1z7x_W 254 PSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF 333 (461)
T ss_dssp TTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHH
Confidence 355566666666665543 34445555666666666666554333333322 4566666666665544 2
Q ss_pred chhhhhhccCceEEcccccCCC
Q 046240 350 LISLEKLLYLKKLNLSFNKLEG 371 (763)
Q Consensus 350 ~~~~~~l~~L~~L~l~~N~l~~ 371 (763)
+..+..+++|+.|++++|+++.
T Consensus 334 ~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 334 SSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp HHHHHHCSSCCEEECCSSBCHH
T ss_pred HHHHhhCCCccEEEccCCcccc
Confidence 3444445666666666665554
No 324
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.3e-24 Score=226.50 Aligned_cols=205 Identities=22% Similarity=0.271 Sum_probs=166.3
Q ss_pred ccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccc
Q 046240 96 EIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNT 175 (763)
Q Consensus 96 ~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 175 (763)
.++++++|+++++++|.++ .+|..++ ++|+.|+|++|.|++..+..|.++++|++|+|++|+|+++.+.
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-------~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~- 73 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-------ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD- 73 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-------SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-
T ss_pred cccccCCccEEECCCCCCC-------cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-
Confidence 4677888899999888885 7777765 6788899999999888888888889999999999988854331
Q ss_pred cCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccc
Q 046240 176 IGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGR 255 (763)
Q Consensus 176 ~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 255 (763)
+.++ +|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|.+
T Consensus 74 -~~l~-----------------------------~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~ 122 (290)
T 1p9a_G 74 -GTLP-----------------------------VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRG 122 (290)
T ss_dssp -SCCT-----------------------------TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTT
T ss_pred -CCCC-----------------------------cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcC
Confidence 2222 6778888888887 66778888889999999999998777788888
Q ss_pred cCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccc
Q 046240 256 LQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSL 335 (763)
Q Consensus 256 l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 335 (763)
+++ |++|+|++|++++..+. .|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++ .+|..+..+++|
T Consensus 123 l~~--L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L 197 (290)
T 1p9a_G 123 LGE--LQELYLKGNELKTLPPG--LLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLL 197 (290)
T ss_dssp CTT--CCEEECTTSCCCCCCTT--TTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCC
T ss_pred CCC--CCEEECCCCCCCccChh--hcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccC
Confidence 876 89999999998866555 6788888999999999998776777788889999999999988 677777778889
Q ss_pred cEEeCcCCccCC
Q 046240 336 EILDLSNNKISG 347 (763)
Q Consensus 336 ~~L~L~~N~l~~ 347 (763)
+.|+|++|++..
T Consensus 198 ~~l~L~~Np~~C 209 (290)
T 1p9a_G 198 PFAFLHGNPWLC 209 (290)
T ss_dssp SEEECCSCCBCC
T ss_pred CeEEeCCCCccC
Confidence 999999988764
No 325
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.92 E-value=9.6e-28 Score=268.09 Aligned_cols=283 Identities=18% Similarity=0.154 Sum_probs=172.6
Q ss_pred ceEEEEecCCCCCC----cCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccC----C
Q 046240 78 RVTALNISSLNLQG----EIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTI----Q 149 (763)
Q Consensus 78 ~v~~L~L~~~~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~----p 149 (763)
++++|+|++|+++. .++..|..+++|++|+|++|.+++. ....+...++...++|++|+|++|++++.. +
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~--~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDA--GLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHH--HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchH--HHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 57777777777763 4466677777777777777766410 000111222223456777777777776533 4
Q ss_pred CcccCCCCCCeeeecCcccccccccccC-----CCCchhhhhhhhhccCCccccc----CCcccccccccccEEEeecCc
Q 046240 150 SPITNASKLTILELGGNSFSGFIPNTIG-----NLRNIEWLGLVIGLIGNPLNGI----LPSSIVNLSISLERLYISNCS 220 (763)
Q Consensus 150 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~~l~~n~l~~~----~p~~~~~l~~~L~~L~L~~N~ 220 (763)
..+..+++|++|+|++|+++...+..+. .+++|+.|+ +++|.+++. ++..+..++ +|++|+|++|+
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~----L~~n~l~~~~~~~l~~~l~~~~-~L~~L~Ls~n~ 238 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALK----LESCGVTSDNCRDLCGIVASKA-SLRELALGSNK 238 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEE----CTTSCCBTTHHHHHHHHHHHCT-TCCEEECCSSB
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEE----ccCCCCcHHHHHHHHHHHHhCC-CccEEeccCCc
Confidence 4555567777777777777654444443 245666666 667766653 355555555 77777777777
Q ss_pred ccccc-----ccccCCccccceeecccccccCC----CCccccccCCCCccEEEecCCccccCCCCccccc-----cCCc
Q 046240 221 ITGNI-----PQVMGNLSIFLLLDLELNKLTGP----IPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIG-----NLKV 286 (763)
Q Consensus 221 l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~-----~l~~ 286 (763)
+++.. +..+..+++|++|+|++|+++.. ++..+..+++ |++|+|++|.+++..+. .+. ..++
T Consensus 239 l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~--L~~L~Ls~n~i~~~~~~--~l~~~l~~~~~~ 314 (461)
T 1z7x_W 239 LGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKES--LKELSLAGNELGDEGAR--LLCETLLEPGCQ 314 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTT--CCEEECTTCCCHHHHHH--HHHHHHTSTTCC
T ss_pred CChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCC--cceEECCCCCCchHHHH--HHHHHhccCCcc
Confidence 66432 22333567777777777777643 4555555554 77777777776543222 122 2256
Q ss_pred ccEEEccccccccc----CCcccCCCcCccEEEccCccccCcccccccc-----cccccEEeCcCCccCC----ccchhh
Q 046240 287 VVEINLSRNNFSGD----IPATIGGLKDVQNISLPYNRLEGPIPESFGY-----LTSLEILDLSNNKISG----FILISL 353 (763)
Q Consensus 287 L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~ 353 (763)
|++|+|++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|++|+|++|++++ .++..+
T Consensus 315 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l 394 (461)
T 1z7x_W 315 LESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATL 394 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHH
T ss_pred ceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHH
Confidence 77777777777654 3455566677777777777776554444432 5577777777777775 466666
Q ss_pred hhhccCceEEcccccCCC
Q 046240 354 EKLLYLKKLNLSFNKLEG 371 (763)
Q Consensus 354 ~~l~~L~~L~l~~N~l~~ 371 (763)
..+++|++|++++|++++
T Consensus 395 ~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 395 LANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHCCCCCEEECCSSSCCH
T ss_pred HhCCCccEEECCCCCCCH
Confidence 777777777777777764
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=3.9e-25 Score=228.51 Aligned_cols=209 Identities=23% Similarity=0.261 Sum_probs=98.7
Q ss_pred cCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCccccccccccc
Q 046240 97 IGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTI 176 (763)
Q Consensus 97 ~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 176 (763)
+..+++|+.|++++|.++ .++. +..+++|++|+|++|.+++. ..+.++++|++|+|++|++++..+..|
T Consensus 37 ~~~l~~L~~L~l~~~~i~-------~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~ 105 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-------SVQG--IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVF 105 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-------CCTT--GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred cccccceeeeeeCCCCcc-------cccc--cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHh
Confidence 334455555555555543 2221 22455555555555555532 245555555555555555555444444
Q ss_pred CCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCcccccc
Q 046240 177 GNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRL 256 (763)
Q Consensus 177 ~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 256 (763)
+++++ |++|+|++|++++..+..|+.+++|++|+|++|++++..+..+..+
T Consensus 106 ~~l~~-----------------------------L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 156 (272)
T 3rfs_A 106 DKLTN-----------------------------LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL 156 (272)
T ss_dssp TTCTT-----------------------------CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cCCcC-----------------------------CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccC
Confidence 44443 3444444444443333344444444444444444443333334444
Q ss_pred CCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCccccccccccccc
Q 046240 257 QNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLE 336 (763)
Q Consensus 257 ~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 336 (763)
++ |++|++++|++++..+. .+..+++|++|+|++|++++..|..|..+++|+.|+|++|.+.+. +++|+
T Consensus 157 ~~--L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~ 225 (272)
T 3rfs_A 157 TN--LTELDLSYNQLQSLPEG--VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIR 225 (272)
T ss_dssp TT--CCEEECCSSCCCCCCTT--TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTH
T ss_pred cc--CCEEECCCCCcCccCHH--HhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHH
Confidence 33 44444444444433333 344445555555555555544444455555555555555544422 33455
Q ss_pred EEeCcCCccCCccchhhhhh
Q 046240 337 ILDLSNNKISGFILISLEKL 356 (763)
Q Consensus 337 ~L~L~~N~l~~~~~~~~~~l 356 (763)
.|++..|+++|.+|..++.+
T Consensus 226 ~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 226 YLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp HHHHHHHHTGGGBBCTTSCB
T ss_pred HHHHHHHhCCCcccCccccc
Confidence 55555555555555544433
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=1.4e-24 Score=221.43 Aligned_cols=191 Identities=23% Similarity=0.317 Sum_probs=133.0
Q ss_pred CCCcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccc
Q 046240 63 SVCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYN 142 (763)
Q Consensus 63 ~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N 142 (763)
+||.|.|++|.. ..+++++++++++ .+|..+. ++|++|+|++|.++ .++...+.++++|++|+|++|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~-------~~~~~~~~~l~~L~~L~L~~n 69 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLA-------TLSDATFRGLTKLTWLNLDYN 69 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCC-------CCCTTTTTTCTTCCEEECTTS
T ss_pred cCCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcC-------ccCHhHhcCcccCCEEECCCC
Confidence 588999999963 4567899999998 5676655 57888888888885 566666667888888888888
Q ss_pred cccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccc
Q 046240 143 RFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSIT 222 (763)
Q Consensus 143 ~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~ 222 (763)
.|++..+..|.++++|++|+|++|+|++..+..|.+++ +|++|+|++|+|+
T Consensus 70 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-----------------------------~L~~L~L~~N~l~ 120 (251)
T 3m19_A 70 QLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLT-----------------------------QLDKLYLGGNQLK 120 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT-----------------------------TCCEEECCSSCCC
T ss_pred cCCccCHhHhccCCcCCEEECCCCcccccChhHhcccC-----------------------------CCCEEEcCCCcCC
Confidence 88877777788888888888888888876666666665 4555555555555
Q ss_pred cccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccc
Q 046240 223 GNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSG 299 (763)
Q Consensus 223 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~ 299 (763)
+..+..|..+++|++|+|++|+|++..+..|..+++ |++|+|++|++++..+. .+..+++|+.|+|++|+++.
T Consensus 121 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 121 SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN--LQTLSLSTNQLQSVPHG--AFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT--CCEEECCSSCCSCCCTT--TTTTCTTCCEEECCSCCBCT
T ss_pred CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcC--CCEEECCCCcCCccCHH--HHhCCCCCCEEEeeCCceeC
Confidence 555555566666666666666666555545655554 66666666666654444 46666667777777777664
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=1.9e-24 Score=218.82 Aligned_cols=196 Identities=21% Similarity=0.247 Sum_probs=116.4
Q ss_pred CCCEEEcCCCcccCCCccccCccccccccCCCccEEEccccc-ccccCCCcccCCCCCCeeeecC-cccccccccccCCC
Q 046240 102 SLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNR-FSGTIQSPITNASKLTILELGG-NSFSGFIPNTIGNL 179 (763)
Q Consensus 102 ~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~-i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l 179 (763)
+|++|+|++|+++ .+|...|.++++|++|+|++|+ ++++.+..|.++++|++|+|++ |+|+++.+..|.++
T Consensus 32 ~l~~L~l~~n~l~-------~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l 104 (239)
T 2xwt_C 32 STQTLKLIETHLR-------TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKEL 104 (239)
T ss_dssp TCCEEEEESCCCS-------EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECC
T ss_pred cccEEEEeCCcce-------EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCC
Confidence 6777777777774 5666666667777777777775 6666666677777777777776 77766555566555
Q ss_pred CchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc---eeecccc-cccCCCCccccc
Q 046240 180 RNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL---LLDLELN-KLTGPIPVTFGR 255 (763)
Q Consensus 180 ~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~ 255 (763)
++| ++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|.+
T Consensus 105 ~~L-----------------------------~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~ 153 (239)
T 2xwt_C 105 PLL-----------------------------KFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQG 153 (239)
T ss_dssp TTC-----------------------------CEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTT
T ss_pred CCC-----------------------------CEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccc
Confidence 544 444444444443 232 44444444 5555555 554444444555
Q ss_pred cCCCCcc-EEEecCCccccCCCCccccccCCcccEEEccccc-ccccCCcccCCC-cCccEEEccCccccCccccccccc
Q 046240 256 LQNSKLD-TLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNN-FSGDIPATIGGL-KDVQNISLPYNRLEGPIPESFGYL 332 (763)
Q Consensus 256 l~~~~L~-~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l 332 (763)
+++ |+ +|++++|+++ .+|.. .+.. ++|++|+|++|+ +++..+..|.++ ++|+.|++++|++++. |.. .+
T Consensus 154 l~~--L~~~L~l~~n~l~-~i~~~-~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~ 225 (239)
T 2xwt_C 154 LCN--ETLTLKLYNNGFT-SVQGY-AFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GL 225 (239)
T ss_dssp TBS--SEEEEECCSCCCC-EECTT-TTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TC
T ss_pred hhc--ceeEEEcCCCCCc-ccCHh-hcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--Hh
Confidence 544 55 5555555555 33331 2333 567777777773 665556667777 7777777777777743 332 46
Q ss_pred ccccEEeCcCC
Q 046240 333 TSLEILDLSNN 343 (763)
Q Consensus 333 ~~L~~L~L~~N 343 (763)
++|+.|+++++
T Consensus 226 ~~L~~L~l~~~ 236 (239)
T 2xwt_C 226 EHLKELIARNT 236 (239)
T ss_dssp TTCSEEECTTC
T ss_pred ccCceeeccCc
Confidence 67777777665
No 329
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=2.4e-25 Score=251.44 Aligned_cols=187 Identities=17% Similarity=0.165 Sum_probs=145.0
Q ss_pred cCcCceecccCCceEEEEEecCCceEEEEEeehh--------hHHHHHHHHHHHHHHHhCCCCccceEEeeeecCCceEE
Q 046240 477 FGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQE--------CARAMKSFEVECEVMKNIRHRNLVKIISGCSNDDFKAL 548 (763)
Q Consensus 477 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 548 (763)
+...+.||+|+||.||+|... ++.+++|+.... .....+.+.+|++++++++||||+++..++...+..++
T Consensus 338 ~~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 338 KIPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ----------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 345678999999999999554 678999976321 11224568999999999999999976666667778899
Q ss_pred EEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCC
Q 046240 549 VLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGE 628 (763)
Q Consensus 549 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 628 (763)
||||+++++|.+++.. +..++.|+++||+|| |+++|+||||||+|||++. .+||+|||+++.....
T Consensus 417 VmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~L---H~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 417 MMSYINGKLAKDVIED---------NLDIAYKIGEIVGKL---HKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHH---HHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHH---HHCcCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 9999999999999875 457999999999999 7789999999999999998 9999999999987532
Q ss_pred CCcc-----ccccccccccccCccccCC--CCCCcchhHHHHHHHHHHHHcCCCCCc
Q 046240 629 DQSM-----TQTQTLATIGYMAPEYGIE--RKVSTRSDIYSYGIMLIETFTRKKPAD 678 (763)
Q Consensus 629 ~~~~-----~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slGv~l~elltg~~p~~ 678 (763)
.... ......||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2111 1235679999999999876 668888999999999888887776653
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.9e-24 Score=223.30 Aligned_cols=208 Identities=21% Similarity=0.261 Sum_probs=147.5
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCC
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNA 155 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l 155 (763)
..+++.|++++|.++. + +.++.+++|++|+|++|.++ .++ .+..+++|++|+|++|.|++..+..|.++
T Consensus 40 l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~-------~~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l 108 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLH-------DIS--ALKELTNLTYLILTGNQLQSLPNGVFDKL 108 (272)
T ss_dssp HTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCC-------CCG--GGTTCTTCCEEECTTSCCCCCCTTTTTTC
T ss_pred ccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCC-------Cch--hhcCCCCCCEEECCCCccCccChhHhcCC
Confidence 3679999999999984 3 46899999999999999996 343 34589999999999999999888899999
Q ss_pred CCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCcccc
Q 046240 156 SKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIF 235 (763)
Q Consensus 156 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L 235 (763)
++|++|+|++|++++..+..|+++++|+ +|+|++|++++..+..|+.+++|
T Consensus 109 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~-----------------------------~L~L~~n~l~~~~~~~~~~l~~L 159 (272)
T 3rfs_A 109 TNLKELVLVENQLQSLPDGVFDKLTNLT-----------------------------YLNLAHNQLQSLPKGVFDKLTNL 159 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCC-----------------------------EEECCSSCCCCCCTTTTTTCTTC
T ss_pred cCCCEEECCCCcCCccCHHHhccCCCCC-----------------------------EEECCCCccCccCHHHhccCccC
Confidence 9999999999999988887787777555 45555555554444455555555
Q ss_pred ceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEE
Q 046240 236 LLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNIS 315 (763)
Q Consensus 236 ~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 315 (763)
++|+|++|++++..+..+..+++ |++|++++|++++..|. .+..+++|++|+|++|++.+. +++|+.|+
T Consensus 160 ~~L~l~~n~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~ 228 (272)
T 3rfs_A 160 TELDLSYNQLQSLPEGVFDKLTQ--LKDLRLYQNQLKSVPDG--VFDRLTSLQYIWLHDNPWDCT-------CPGIRYLS 228 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTT--CCEEECCSSCCSCCCTT--TTTTCTTCCEEECCSSCBCCC-------TTTTHHHH
T ss_pred CEEECCCCCcCccCHHHhcCCcc--CCEEECCCCcCCccCHH--HHhCCcCCCEEEccCCCcccc-------CcHHHHHH
Confidence 55555555555444444555544 56666666666544444 455666666666666666532 34566666
Q ss_pred ccCccccCccccccccccc
Q 046240 316 LPYNRLEGPIPESFGYLTS 334 (763)
Q Consensus 316 Ls~N~l~~~~p~~~~~l~~ 334 (763)
++.|+++|.+|..++.++.
T Consensus 229 ~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 229 EWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp HHHHHTGGGBBCTTSCBCG
T ss_pred HHHHhCCCcccCcccccCC
Confidence 7777777777766665544
No 331
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=4.5e-26 Score=243.37 Aligned_cols=263 Identities=18% Similarity=0.230 Sum_probs=182.8
Q ss_pred CCcccceeecCCCCceEEEEecCCCCCCcCCcccCCC--CCCCEEEcCCCcccCCCccccCccccccccCCCccEEEccc
Q 046240 64 VCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYL--PSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAY 141 (763)
Q Consensus 64 ~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~ 141 (763)
|..|.++.|+ ...++.|+++++.+. +..+..+ ++++.|++++|.+. ..+..++ .+++|++|+|++
T Consensus 36 c~~W~~~~~~--~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~-------~~~~~~~-~~~~L~~L~L~~ 102 (336)
T 2ast_B 36 CKRWYRLASD--ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMD-------QPLAEHF-SPFRVQHMDLSN 102 (336)
T ss_dssp CHHHHHHHTC--STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEEC-------SCCCSCC-CCBCCCEEECTT
T ss_pred HHHHHHHhcC--chhheeeccccccCC---HHHHHhhhhccceEEEcCCcccc-------ccchhhc-cCCCCCEEEccC
Confidence 4479999886 346888999998877 4566666 78888888888775 3333344 678888888888
Q ss_pred cccccc-CCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecC-
Q 046240 142 NRFSGT-IQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNC- 219 (763)
Q Consensus 142 N~i~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N- 219 (763)
|.+++. +|..+.++++|++|+|++|++++..+..|++++ +|++|+|++|
T Consensus 103 ~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~-----------------------------~L~~L~L~~~~ 153 (336)
T 2ast_B 103 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNS-----------------------------NLVRLNLSGCS 153 (336)
T ss_dssp CEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCT-----------------------------TCSEEECTTCB
T ss_pred CCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCC-----------------------------CCCEEECCCCC
Confidence 887765 666777778888888888877766666665555 4555555555
Q ss_pred ccccc-cccccCCccccceeecccc-cccCC-CCccccccC-CCCccEEEecCCc--cc-cCCCCccccccCCcccEEEc
Q 046240 220 SITGN-IPQVMGNLSIFLLLDLELN-KLTGP-IPVTFGRLQ-NSKLDTLSLCGNS--FS-GSIPSCIDIGNLKVVVEINL 292 (763)
Q Consensus 220 ~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~~~L~~L~L~~N~--l~-~~~p~~~~~~~l~~L~~L~L 292 (763)
.+++. ++..+..+++|++|+|++| .+++. ++..+..++ + |++|++++|. ++ +.+|. .+..+++|++|++
T Consensus 154 ~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~--L~~L~l~~~~~~~~~~~l~~--~~~~~~~L~~L~l 229 (336)
T 2ast_B 154 GFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET--ITQLNLSGYRKNLQKSDLST--LVRRCPNLVHLDL 229 (336)
T ss_dssp SCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTT--CCEEECCSCGGGSCHHHHHH--HHHHCTTCSEEEC
T ss_pred CCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccC--CCEEEeCCCcccCCHHHHHH--HHhhCCCCCEEeC
Confidence 44432 4445556666666666666 66543 455555555 4 7777777773 33 23444 4667788888888
Q ss_pred cccc-ccccCCcccCCCcCccEEEccCcc-ccCcccccccccccccEEeCcCCccCCccchhhhhhc-cCceEEcccccC
Q 046240 293 SRNN-FSGDIPATIGGLKDVQNISLPYNR-LEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLL-YLKKLNLSFNKL 369 (763)
Q Consensus 293 s~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l 369 (763)
++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++| ++ ...+..+. .++.|++++|++
T Consensus 230 ~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l 305 (336)
T 2ast_B 230 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHF 305 (336)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCS
T ss_pred CCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccC
Confidence 8888 676777788888999999999885 33222236788999999999999 43 34455553 478888999999
Q ss_pred CCCCCCC
Q 046240 370 EGEIPRG 376 (763)
Q Consensus 370 ~~~~p~~ 376 (763)
++..|..
T Consensus 306 ~~~~~~~ 312 (336)
T 2ast_B 306 TTIARPT 312 (336)
T ss_dssp CCTTCSS
T ss_pred ccccCCc
Confidence 9888754
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=7e-26 Score=244.38 Aligned_cols=253 Identities=18% Similarity=0.197 Sum_probs=157.8
Q ss_pred EEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccc----cccccCC-CccEEEcccccccccCCCcccCC
Q 046240 81 ALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPS----RIDLALP-NVKALSLAYNRFSGTIQSPITNA 155 (763)
Q Consensus 81 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~----~~~~~l~-~L~~L~L~~N~i~~~~p~~~~~l 155 (763)
.++|++|++++.+|..+...++|++|+|++|.++ .++. ..+..++ +|++|+|++|.|++..+..|..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~-------~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 74 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLY-------SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQI 74 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGG-------GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCC-------hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHH
Confidence 3678999999988888888888999999999985 5554 5556788 89999999999998888877775
Q ss_pred -----CCCCeeeecCcccccccccccCCC-----CchhhhhhhhhccCCcccccCCcccccc----cccccEEEeecCcc
Q 046240 156 -----SKLTILELGGNSFSGFIPNTIGNL-----RNIEWLGLVIGLIGNPLNGILPSSIVNL----SISLERLYISNCSI 221 (763)
Q Consensus 156 -----~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~~l~~n~l~~~~p~~~~~l----~~~L~~L~L~~N~l 221 (763)
++|++|+|++|+|++..+..+... ++|+.|+ +++|.+++..+..+... ..+|++|+|++|++
T Consensus 75 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~----Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 150 (362)
T 3goz_A 75 LAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLD----LGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDL 150 (362)
T ss_dssp HHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEE----CCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCG
T ss_pred HhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEE----CcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcC
Confidence 899999999999987766644433 6666666 66666665554444332 22666666666666
Q ss_pred ccccc----cccCCcc-ccceeecccccccCCCCcccccc-----CCCCccEEEecCCccccC----CCCcccccc-CCc
Q 046240 222 TGNIP----QVMGNLS-IFLLLDLELNKLTGPIPVTFGRL-----QNSKLDTLSLCGNSFSGS----IPSCIDIGN-LKV 286 (763)
Q Consensus 222 ~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~~~L~~L~L~~N~l~~~----~p~~~~~~~-l~~ 286 (763)
++..+ ..+..++ +|++|+|++|++++..+..+... .+ |++|+|++|.+++. ++. .+.. .++
T Consensus 151 ~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~--L~~L~Ls~N~i~~~~~~~l~~--~l~~~~~~ 226 (362)
T 3goz_A 151 GIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPAS--VTSLDLSANLLGLKSYAELAY--IFSSIPNH 226 (362)
T ss_dssp GGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTT--CCEEECTTSCGGGSCHHHHHH--HHHHSCTT
T ss_pred CHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCC--CCEEECCCCCCChhHHHHHHH--HHhcCCCC
Confidence 64322 2233343 66666666666665554433322 22 66666666666531 222 2222 235
Q ss_pred ccEEEcccccccccCC----cccCCCcCccEEEccCccccCc-------ccccccccccccEEeCcCCccCCc
Q 046240 287 VVEINLSRNNFSGDIP----ATIGGLKDVQNISLPYNRLEGP-------IPESFGYLTSLEILDLSNNKISGF 348 (763)
Q Consensus 287 L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~L~~N~l~~~ 348 (763)
|++|+|++|++++..+ ..+..+++|+.|+|++|.+.+. ++..+..+++|+.||+++|++...
T Consensus 227 L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 227 VVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred ceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 6666666666654332 2234455566666666653322 222444555555555555555544
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=9.6e-24 Score=213.66 Aligned_cols=201 Identities=15% Similarity=0.194 Sum_probs=163.6
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCc-ccCCCccccCccccccccCCCccEEEccc-ccccccCCCccc
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNS-LVGNNSLSGSLPSRIDLALPNVKALSLAY-NRFSGTIQSPIT 153 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~lp~~~~~~l~~L~~L~L~~-N~i~~~~p~~~~ 153 (763)
..+++.|+|++|++++..+..|.++++|++|+|++|. ++ .+|...|.++++|++|+|++ |+|+++.+..|.
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-------~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~ 102 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-------QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALK 102 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-------EECTTTEESCTTCCEEEEEEETTCCEECTTSEE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-------eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhC
Confidence 3579999999999998777899999999999999997 74 88988888999999999999 999988889999
Q ss_pred CCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecC-ccccccccccCCc
Q 046240 154 NASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNC-SITGNIPQVMGNL 232 (763)
Q Consensus 154 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N-~l~~~~~~~~~~l 232 (763)
++++|++|+|++|++++ +|. |.++++|+ .|++|++++| ++++..+..|.++
T Consensus 103 ~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~--------------------------~L~~L~l~~N~~l~~i~~~~~~~l 154 (239)
T 2xwt_C 103 ELPLLKFLGIFNTGLKM-FPD-LTKVYSTD--------------------------IFFILEITDNPYMTSIPVNAFQGL 154 (239)
T ss_dssp CCTTCCEEEEEEECCCS-CCC-CTTCCBCC--------------------------SEEEEEEESCTTCCEECTTTTTTT
T ss_pred CCCCCCEEeCCCCCCcc-ccc-cccccccc--------------------------cccEEECCCCcchhhcCcccccch
Confidence 99999999999999996 554 66666544 3558888888 8887777778888
Q ss_pred cccc-eeecccccccCCCCccccccCCCCccEEEecCCc-cccCCCCccccccC-CcccEEEcccccccccCCcccCCCc
Q 046240 233 SIFL-LLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNS-FSGSIPSCIDIGNL-KVVVEINLSRNNFSGDIPATIGGLK 309 (763)
Q Consensus 233 ~~L~-~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~-l~~~~p~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~ 309 (763)
++|+ +|++++|+++...+..|.. .+ |+.|+|++|+ +++..+. .|.++ ++|+.|++++|++++. |.. .++
T Consensus 155 ~~L~~~L~l~~n~l~~i~~~~~~~-~~--L~~L~L~~n~~l~~i~~~--~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~ 226 (239)
T 2xwt_C 155 CNETLTLKLYNNGFTSVQGYAFNG-TK--LDAVYLNKNKYLTVIDKD--AFGGVYSGPSLLDVSQTSVTAL-PSK--GLE 226 (239)
T ss_dssp BSSEEEEECCSCCCCEECTTTTTT-CE--EEEEECTTCTTCCEECTT--TTTTCSBCCSEEECTTCCCCCC-CCT--TCT
T ss_pred hcceeEEEcCCCCCcccCHhhcCC-CC--CCEEEcCCCCCcccCCHH--HhhccccCCcEEECCCCccccC-Chh--Hhc
Confidence 8888 8888888888333333443 44 8888888884 8755555 67788 8899999999988854 433 567
Q ss_pred CccEEEccCc
Q 046240 310 DVQNISLPYN 319 (763)
Q Consensus 310 ~L~~L~Ls~N 319 (763)
+|+.|+++++
T Consensus 227 ~L~~L~l~~~ 236 (239)
T 2xwt_C 227 HLKELIARNT 236 (239)
T ss_dssp TCSEEECTTC
T ss_pred cCceeeccCc
Confidence 8888888775
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=2.2e-24 Score=227.48 Aligned_cols=208 Identities=17% Similarity=0.186 Sum_probs=138.5
Q ss_pred CCCccEEEcccccccccCCCcc--cCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCccccccc
Q 046240 131 LPNVKALSLAYNRFSGTIQSPI--TNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLS 208 (763)
Q Consensus 131 l~~L~~L~L~~N~i~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~ 208 (763)
+++|++|+|++|.+++..|..+ .++++|++|+|++|++++..+. +.. ..+..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~-------~~~-----------------~~~~~~~ 145 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSW-------LAE-----------------LQQWLKP 145 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSS-------HHH-----------------HHTTBCS
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhh-------hHH-----------------HHhhhcc
Confidence 3456666666666666666655 5666666666666666543220 000 1222333
Q ss_pred ccccEEEeecCccccccccccCCccccceeecccccccCC--C--CccccccCCCCccEEEecCCccccCCCCc-c-ccc
Q 046240 209 ISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGP--I--PVTFGRLQNSKLDTLSLCGNSFSGSIPSC-I-DIG 282 (763)
Q Consensus 209 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~~~L~~L~L~~N~l~~~~p~~-~-~~~ 282 (763)
+|++|+|++|++++..+..|+.+++|++|+|++|++.+. + +..+..+++ |++|+|++|+++ .++.. . .+.
T Consensus 146 -~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~--L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 146 -GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPA--IQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp -CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCC--CCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred -CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCC--CCEEECCCCCCC-chHHHHHHHHh
Confidence 777788888888777777777788888888888876542 1 122345554 778888888776 22220 0 135
Q ss_pred cCCcccEEEcccccccccCCcccCCC---cCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccC
Q 046240 283 NLKVVVEINLSRNNFSGDIPATIGGL---KDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYL 359 (763)
Q Consensus 283 ~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 359 (763)
.+++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+++ |. +..+++|
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 67788888888888887777777766 58888888888888 5666554 7888888888888875 32 6777888
Q ss_pred ceEEcccccCCC
Q 046240 360 KKLNLSFNKLEG 371 (763)
Q Consensus 360 ~~L~l~~N~l~~ 371 (763)
+.|+|++|+++.
T Consensus 297 ~~L~L~~N~l~~ 308 (310)
T 4glp_A 297 DNLTLDGNPFLV 308 (310)
T ss_dssp SCEECSSTTTSC
T ss_pred cEEECcCCCCCC
Confidence 888888888873
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=3.6e-24 Score=225.74 Aligned_cols=228 Identities=16% Similarity=0.164 Sum_probs=150.7
Q ss_pred ceEEEEecCCCCCCcCCc---ccCCCCCCCEEEcCCCcccCCCccccCcccccc-ccCCCccEEEcccccccccCC----
Q 046240 78 RVTALNISSLNLQGEIPH---EIGYLPSLTKLALGYNSLVGNNSLSGSLPSRID-LALPNVKALSLAYNRFSGTIQ---- 149 (763)
Q Consensus 78 ~v~~L~L~~~~l~~~~~~---~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~-~~l~~L~~L~L~~N~i~~~~p---- 149 (763)
+++.|.+.++.++...-. .+..+++|++|+|++|.++ +.+|..++ ..+++|++|+|++|.|++..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~------~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~ 138 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKIT------GTMPPLPLEATGLALSSLRLRNVSWATGRSWLAE 138 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCB------SCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHH
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEec------cchhhhhhhccCCCCCEEEeecccccchhhhhHH
Confidence 467788888776532111 1223567999999999986 56776664 689999999999999998665
Q ss_pred CcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCcccccc-ccc
Q 046240 150 SPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNI-PQV 228 (763)
Q Consensus 150 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~-~~~ 228 (763)
..+..+++|++|+|++|+|++..+..|+++++|++|+ +++|++.+... .. +..
T Consensus 139 ~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~----Ls~N~l~~~~~----------------------~~~~~~ 192 (310)
T 4glp_A 139 LQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLD----LSDNPGLGERG----------------------LMAALC 192 (310)
T ss_dssp HHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEE----CCSCTTCHHHH----------------------HHTTSC
T ss_pred HHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEE----CCCCCCccchh----------------------hhHHHh
Confidence 3456789999999999999988888888877655555 44454432100 11 122
Q ss_pred cCCccccceeecccccccCCCCc----cccccCCCCccEEEecCCccccCCCCccccccC---CcccEEEcccccccccC
Q 046240 229 MGNLSIFLLLDLELNKLTGPIPV----TFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNL---KVVVEINLSRNNFSGDI 301 (763)
Q Consensus 229 ~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l---~~L~~L~Ls~N~l~~~~ 301 (763)
++.+++|++|+|++|+++ .+|. .+.++++ |++|+|++|++++..|. .+..+ ++|++|+|++|+|+ .+
T Consensus 193 ~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~--L~~L~Ls~N~l~~~~p~--~~~~~~~~~~L~~L~Ls~N~l~-~l 266 (310)
T 4glp_A 193 PHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQ--PHSLDLSHNSLRATVNP--SAPRCMWSSALNSLNLSFAGLE-QV 266 (310)
T ss_dssp TTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCC--CSSEECTTSCCCCCCCS--CCSSCCCCTTCCCEECCSSCCC-SC
T ss_pred hhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCC--CCEEECCCCCCCccchh--hHHhccCcCcCCEEECCCCCCC-ch
Confidence 345555666666666654 2222 1334443 66666666666655454 33333 57777777777777 45
Q ss_pred CcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCC
Q 046240 302 PATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISG 347 (763)
Q Consensus 302 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 347 (763)
|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 267 p~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 267 PKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred hhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 65554 6788888888888753 33 5677888888888888764
No 336
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=2.9e-23 Score=222.68 Aligned_cols=150 Identities=16% Similarity=0.149 Sum_probs=91.8
Q ss_pred EEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCC-CcccCCCCCCe
Q 046240 82 LNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQ-SPITNASKLTI 160 (763)
Q Consensus 82 L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~ 160 (763)
++.++++|+ .+|..+ .+++++|+|++|+|+ .||++.|.++++|++|+|++|++.+.+| ..|.++++|++
T Consensus 14 v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-------~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~ 83 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-------VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHE 83 (350)
T ss_dssp EEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-------EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCE
T ss_pred EEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-------CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhh
Confidence 445567777 566655 357888888888885 7777777778888888888887755444 46777777654
Q ss_pred -eeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeec-CccccccccccCCcc-ccce
Q 046240 161 -LELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISN-CSITGNIPQVMGNLS-IFLL 237 (763)
Q Consensus 161 -L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~ 237 (763)
+++++|+|+.+.|+.|.++++|++|+ +++|.+.+..+..+.... ++..|++.+ |++....+..|..+. .++.
T Consensus 84 ~l~~~~N~l~~l~~~~f~~l~~L~~L~----l~~n~l~~~~~~~~~~~~-~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~ 158 (350)
T 4ay9_X 84 IRIEKANNLLYINPEAFQNLPNLQYLL----ISNTGIKHLPDVHKIHSL-QKVLLDIQDNINIHTIERNSFVGLSFESVI 158 (350)
T ss_dssp EEEEEETTCCEECTTSBCCCTTCCEEE----EEEECCSSCCCCTTCCBS-SCEEEEEESCTTCCEECTTSSTTSBSSCEE
T ss_pred hhcccCCcccccCchhhhhcccccccc----ccccccccCCchhhcccc-hhhhhhhccccccccccccchhhcchhhhh
Confidence 55666777777777777777665555 455555544444444444 455555543 344444444444443 3444
Q ss_pred eeccccccc
Q 046240 238 LDLELNKLT 246 (763)
Q Consensus 238 L~L~~N~l~ 246 (763)
|+|++|+|+
T Consensus 159 L~L~~N~i~ 167 (350)
T 4ay9_X 159 LWLNKNGIQ 167 (350)
T ss_dssp EECCSSCCC
T ss_pred hcccccccc
Confidence 455555544
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.5e-25 Score=244.06 Aligned_cols=244 Identities=18% Similarity=0.210 Sum_probs=154.1
Q ss_pred cCCcccCCCCCCCEEEcCCCcccCCCccccCcccc---ccccCCCccEEEcccc---cccccCCCcc-------cCCCCC
Q 046240 92 EIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSR---IDLALPNVKALSLAYN---RFSGTIQSPI-------TNASKL 158 (763)
Q Consensus 92 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~---~~~~l~~L~~L~L~~N---~i~~~~p~~~-------~~l~~L 158 (763)
.++..+..+++|++|+|++|.++ +..+.. .+..+++|++|+|++| ++++.+|..+ .++++|
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~------~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L 96 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIG------TEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKL 96 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEEC------HHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHhcCCCccEEECCCCCCC------HHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcc
Confidence 45566777777777777777764 111111 1335677777777774 3444445443 566667
Q ss_pred CeeeecCccccc----ccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccC----
Q 046240 159 TILELGGNSFSG----FIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMG---- 230 (763)
Q Consensus 159 ~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~---- 230 (763)
++|+|++|+|++ .+|..+.+++ +|++|+|++|.++...+..+.
T Consensus 97 ~~L~Ls~n~l~~~~~~~l~~~l~~~~-----------------------------~L~~L~L~~n~l~~~~~~~l~~~l~ 147 (386)
T 2ca6_A 97 HTVRLSDNAFGPTAQEPLIDFLSKHT-----------------------------PLEHLYLHNNGLGPQAGAKIARALQ 147 (386)
T ss_dssp CEEECCSCCCCTTTHHHHHHHHHHCT-----------------------------TCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred cEEECCCCcCCHHHHHHHHHHHHhCC-----------------------------CCCEEECcCCCCCHHHHHHHHHHHH
Confidence 777777777664 2344444444 555666666665533333222
Q ss_pred Cc---------cccceeeccccccc-CCCC---ccccccCCCCccEEEecCCccc--c---CCCCccccccCCcccEEEc
Q 046240 231 NL---------SIFLLLDLELNKLT-GPIP---VTFGRLQNSKLDTLSLCGNSFS--G---SIPSCIDIGNLKVVVEINL 292 (763)
Q Consensus 231 ~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~~~L~~L~L~~N~l~--~---~~p~~~~~~~l~~L~~L~L 292 (763)
.+ ++|++|+|++|+++ +.+| ..+..+++ |++|+|++|+++ | .+|. .+..+++|++|+|
T Consensus 148 ~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~--L~~L~L~~n~l~~~g~~~l~~~--~l~~~~~L~~L~L 223 (386)
T 2ca6_A 148 ELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRL--LHTVKMVQNGIRPEGIEHLLLE--GLAYCQELKVLDL 223 (386)
T ss_dssp HHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTT--CCEEECCSSCCCHHHHHHHHHT--TGGGCTTCCEEEC
T ss_pred HHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCC--cCEEECcCCCCCHhHHHHHHHH--HhhcCCCccEEEC
Confidence 22 66777777777665 2333 34445544 777777777766 2 3343 4667778888888
Q ss_pred cccccc----ccCCcccCCCcCccEEEccCccccCc----ccccc--cccccccEEeCcCCccCC----ccchhh-hhhc
Q 046240 293 SRNNFS----GDIPATIGGLKDVQNISLPYNRLEGP----IPESF--GYLTSLEILDLSNNKISG----FILISL-EKLL 357 (763)
Q Consensus 293 s~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~ 357 (763)
++|.++ +.+|..+..+++|+.|+|++|++++. ++..+ +.+++|+.|+|++|++++ .+|..+ .+++
T Consensus 224 s~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~ 303 (386)
T 2ca6_A 224 QDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMP 303 (386)
T ss_dssp CSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCT
T ss_pred cCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCC
Confidence 888875 45677777888888888888888755 45555 337888888888888887 355555 5678
Q ss_pred cCceEEcccccCCCCCC
Q 046240 358 YLKKLNLSFNKLEGEIP 374 (763)
Q Consensus 358 ~L~~L~l~~N~l~~~~p 374 (763)
+|+.|++++|++++..+
T Consensus 304 ~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 304 DLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TCCEEECTTSBSCTTSH
T ss_pred CceEEEccCCcCCcchh
Confidence 88888888888876543
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=8.3e-26 Score=246.18 Aligned_cols=267 Identities=16% Similarity=0.175 Sum_probs=205.2
Q ss_pred CceEEEEecCCCCCCcCC----cccCCCCCCCEEEcCCCcccCCCccccCccccc------cccCCCccEEEcccccccc
Q 046240 77 HRVTALNISSLNLQGEIP----HEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRI------DLALPNVKALSLAYNRFSG 146 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~------~~~l~~L~~L~L~~N~i~~ 146 (763)
.+++.|+|++|.+++..+ ..|..+++|++|+|++|.+ +.+.+.+|..+ +..+++|++|+|++|.|++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~---~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 108 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFT---GRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 108 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCT---TSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCccccc---CccccchhHHHHHHHHHHhhCCcccEEECCCCcCCH
Confidence 579999999999987644 4588999999999999876 34556777766 3588999999999999997
Q ss_pred ----cCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccc
Q 046240 147 ----TIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSIT 222 (763)
Q Consensus 147 ----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~ 222 (763)
.+|..+.++++|++|+|++|+|+...+..+... |..+ ..|++.+.. + +|++|+|++|+++
T Consensus 109 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~l------~~~~~~~~~-------~-~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 109 TAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQEL------AVNKKAKNA-------P-PLRSIICGRNRLE 172 (386)
T ss_dssp TTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHHH------HHHHHHHTC-------C-CCCEEECCSSCCT
T ss_pred HHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHHH------hhhhhcccC-------C-CCcEEECCCCCCC
Confidence 477788999999999999999986555444431 1111 112222111 2 8999999999987
Q ss_pred -cccc---cccCCccccceeecccccccC-----CCCccccccCCCCccEEEecCCccc----cCCCCccccccCCcccE
Q 046240 223 -GNIP---QVMGNLSIFLLLDLELNKLTG-----PIPVTFGRLQNSKLDTLSLCGNSFS----GSIPSCIDIGNLKVVVE 289 (763)
Q Consensus 223 -~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~~~L~~L~L~~N~l~----~~~p~~~~~~~l~~L~~ 289 (763)
+.++ ..+..+++|++|+|++|+++. ..|..+..+++ |+.|+|++|.++ +.+|. .+..+++|++
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~--L~~L~Ls~n~l~~~g~~~l~~--~l~~~~~L~~ 248 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQE--LKVLDLQDNTFTHLGSSALAI--ALKSWPNLRE 248 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTT--CCEEECCSSCCHHHHHHHHHH--HGGGCTTCCE
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCC--ccEEECcCCCCCcHHHHHHHH--HHccCCCcCE
Confidence 3444 467788899999999999872 34547777766 999999999995 46666 6888999999
Q ss_pred EEccccccccc----CCccc--CCCcCccEEEccCccccC----cccccc-cccccccEEeCcCCccCCccc--hhh-hh
Q 046240 290 INLSRNNFSGD----IPATI--GGLKDVQNISLPYNRLEG----PIPESF-GYLTSLEILDLSNNKISGFIL--ISL-EK 355 (763)
Q Consensus 290 L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~~--~~~-~~ 355 (763)
|+|++|+|++. +|..+ +.+++|+.|+|++|.+++ .+|..+ ..+++|+.|+|++|++++..+ ..+ ..
T Consensus 249 L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~ 328 (386)
T 2ca6_A 249 LGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREV 328 (386)
T ss_dssp EECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHH
T ss_pred EECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHH
Confidence 99999999875 56666 448999999999999997 477777 668999999999999998763 333 34
Q ss_pred hccCceEEccc
Q 046240 356 LLYLKKLNLSF 366 (763)
Q Consensus 356 l~~L~~L~l~~ 366 (763)
++.++.+++..
T Consensus 329 l~~~~~~~l~~ 339 (386)
T 2ca6_A 329 FSTRGRGELDE 339 (386)
T ss_dssp HHHHTCCEECC
T ss_pred hhhcCcchhhh
Confidence 56666555543
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.3e-22 Score=206.94 Aligned_cols=133 Identities=23% Similarity=0.259 Sum_probs=67.2
Q ss_pred cEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEE
Q 046240 212 ERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEIN 291 (763)
Q Consensus 212 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~ 291 (763)
++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++ |++|+|++|++++..+. .+..+++|++|+
T Consensus 62 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~ 137 (251)
T 3m19_A 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQ--LDKLYLGGNQLKSLPSG--VFDRLTKLKELR 137 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTT--CCEEECCSSCCCCCCTT--TTTTCTTCCEEE
T ss_pred CEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCC--CCEEEcCCCcCCCcChh--HhccCCcccEEE
Confidence 33333333333333333444444444444444444333333444433 44444444444433332 344555556666
Q ss_pred cccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCc
Q 046240 292 LSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGF 348 (763)
Q Consensus 292 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 348 (763)
|++|+|++..+..|+.+++|+.|+|++|++++..+..|..+++|+.|+|++|++...
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 666666555455566666666666666666655555566666666666666666553
No 340
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=7.6e-23 Score=219.45 Aligned_cols=238 Identities=16% Similarity=0.135 Sum_probs=186.9
Q ss_pred CcccceeecCC---------CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCcc
Q 046240 65 CNWIGITCDVN---------SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVK 135 (763)
Q Consensus 65 c~w~gv~c~~~---------~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~ 135 (763)
|+|..|.|+.. ..++++|+|++|+|+.+.+.+|.++++|++|+|++|++. +.+|..+|.++++|+
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~------~~i~~~~f~~L~~l~ 82 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVL------EVIEADVFSNLPKLH 82 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTC------CEECTTSBCSCTTCC
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCC------CccChhHhhcchhhh
Confidence 78889999753 257999999999999666678999999999999999986 478999999999987
Q ss_pred E-EEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEE
Q 046240 136 A-LSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERL 214 (763)
Q Consensus 136 ~-L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L 214 (763)
+ +.++.|+|+++.|+.|.++++|++|++++|+|++..+..+.+..++..|++ ...|++....+..|..+...|++|
T Consensus 83 ~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l---~~~~~i~~l~~~~f~~~~~~l~~L 159 (350)
T 4ay9_X 83 EIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI---QDNINIHTIERNSFVGLSFESVIL 159 (350)
T ss_dssp EEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE---ESCTTCCEECTTSSTTSBSSCEEE
T ss_pred hhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh---ccccccccccccchhhcchhhhhh
Confidence 6 677789999999999999999999999999999888888888888888883 244677776677788877679999
Q ss_pred EeecCccccccccccCCccccceeeccc-ccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcc
Q 046240 215 YISNCSITGNIPQVMGNLSIFLLLDLEL-NKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLS 293 (763)
Q Consensus 215 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 293 (763)
+|++|+|+.+.+..| ..++|+.|++++ |.++...+..|.++++ |++|+|++|+|+ .+|.. . +.+|+.|.+.
T Consensus 160 ~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~--L~~LdLs~N~l~-~lp~~-~---~~~L~~L~~l 231 (350)
T 4ay9_X 160 WLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASG--PVILDISRTRIH-SLPSY-G---LENLKKLRAR 231 (350)
T ss_dssp ECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEEC--CSEEECTTSCCC-CCCSS-S---CTTCCEEECT
T ss_pred ccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcc--cchhhcCCCCcC-ccChh-h---hccchHhhhc
Confidence 999999996555555 557899999975 6777554556788876 889999999888 45541 3 3445555554
Q ss_pred cccccccCCcccCCCcCccEEEccCcc
Q 046240 294 RNNFSGDIPATIGGLKDVQNISLPYNR 320 (763)
Q Consensus 294 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 320 (763)
++.--..+| .+..+++|+.++++++.
T Consensus 232 ~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 232 STYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred cCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 443333555 37777888888877654
No 341
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=4.6e-25 Score=237.93 Aligned_cols=255 Identities=16% Similarity=0.166 Sum_probs=187.9
Q ss_pred EEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCC----CcccCCC-CCCeeeecCcccccccccccCCC
Q 046240 105 KLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQ----SPITNAS-KLTILELGGNSFSGFIPNTIGNL 179 (763)
Q Consensus 105 ~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l 179 (763)
.++|++|.++ |.+|... ...++|++|+|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..|..+
T Consensus 2 ~~~ls~n~~~------~~~~~~~-~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 74 (362)
T 3goz_A 2 NYKLTLHPGS------NPVEEFT-SIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQI 74 (362)
T ss_dssp EEECCCCTTC------CHHHHHH-TSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ccccccccch------HHHHHHH-hCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHH
Confidence 4567777775 4555543 355669999999999998777 7788888 89999999999998888778776
Q ss_pred -----CchhhhhhhhhccCCcccccCCcccccc-----cccccEEEeecCccccccccccCC-----ccccceeeccccc
Q 046240 180 -----RNIEWLGLVIGLIGNPLNGILPSSIVNL-----SISLERLYISNCSITGNIPQVMGN-----LSIFLLLDLELNK 244 (763)
Q Consensus 180 -----~~L~~L~L~~~l~~n~l~~~~p~~~~~l-----~~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~ 244 (763)
++|++|+ +++|.+++..+..+... . +|++|+|++|+|++..+..+.. .++|++|+|++|+
T Consensus 75 l~~~~~~L~~L~----Ls~n~l~~~~~~~l~~~l~~~~~-~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 75 LAAIPANVTSLN----LSGNFLSYKSSDELVKTLAAIPF-TITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp HHTSCTTCCEEE----CCSSCGGGSCHHHHHHHHHTSCT-TCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSC
T ss_pred HhccCCCccEEE----CcCCcCChHHHHHHHHHHHhCCC-CccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCc
Confidence 8888888 88898888777765554 4 8999999999998776655443 2689999999999
Q ss_pred ccCCCCccc----cccCCCCccEEEecCCccccCCCCcc--ccccC-CcccEEEccccccccc----CCcccCC-CcCcc
Q 046240 245 LTGPIPVTF----GRLQNSKLDTLSLCGNSFSGSIPSCI--DIGNL-KVVVEINLSRNNFSGD----IPATIGG-LKDVQ 312 (763)
Q Consensus 245 l~~~~p~~~----~~l~~~~L~~L~L~~N~l~~~~p~~~--~~~~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~ 312 (763)
++...+..+ ...+ .+|++|+|++|++++..+... .+... ++|++|+|++|+|+.. ++..+.. .++|+
T Consensus 150 l~~~~~~~l~~~l~~~~-~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~ 228 (362)
T 3goz_A 150 LGIKSSDELIQILAAIP-ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVV 228 (362)
T ss_dssp GGGSCHHHHHHHHHTSC-TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCC
T ss_pred CCHHHHHHHHHHHhcCC-ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCce
Confidence 885444333 3333 148999999999886555310 12334 5889999999988863 3445555 35899
Q ss_pred EEEccCccccCccc----ccccccccccEEeCcCCccCCccch-------hhhhhccCceEEcccccCCCC
Q 046240 313 NISLPYNRLEGPIP----ESFGYLTSLEILDLSNNKISGFILI-------SLEKLLYLKKLNLSFNKLEGE 372 (763)
Q Consensus 313 ~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~~-------~~~~l~~L~~L~l~~N~l~~~ 372 (763)
.|+|++|++++..+ ..+..+++|+.|+|++|.+..+.+. .+..+++|+.||+++|++...
T Consensus 229 ~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 229 SLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp EEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred EEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 99999998886544 3446678899999999986655433 455677888889999888755
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=8.6e-24 Score=238.59 Aligned_cols=209 Identities=24% Similarity=0.373 Sum_probs=137.2
Q ss_pred CCCCCCCCC-----cccce-eecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCcccccccc
Q 046240 57 NWTSNTSVC-----NWIGI-TCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLA 130 (763)
Q Consensus 57 ~w~~~~~~c-----~w~gv-~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~ 130 (763)
+|..+.++| .|.|+ .|.. .+++.|+|++|+|++ +|..+. ++|++|+|++|.|+ .+| ..
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-------~ip----~~ 98 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-------SLP----EL 98 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-------CCC----CC
T ss_pred HHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-------ccc----cc
Confidence 676667788 79999 7863 489999999999996 777663 88999999999995 677 24
Q ss_pred CCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCccccccccc
Q 046240 131 LPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSIS 210 (763)
Q Consensus 131 l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~ 210 (763)
+++|++|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+ +++|.+++ +|.
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~----Ls~N~l~~-lp~-------- 157 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYIN----ADNNQLTM-LPE-------- 157 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEE----CCSSCCSC-CCC--------
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEe----CCCCccCc-CCC--------
Confidence 7899999999999997 666 665 89999999999986 444 445444444 44444443 332
Q ss_pred ccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCcccccc-----CC
Q 046240 211 LERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGN-----LK 285 (763)
Q Consensus 211 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~-----l~ 285 (763)
.+++|++|+|++|+|++ +|. |. + +|+.|+|++|+|+ .+|. +.. .+
T Consensus 158 --------------------~l~~L~~L~Ls~N~L~~-lp~-l~--~--~L~~L~Ls~N~L~-~lp~---~~~~L~~~~~ 207 (571)
T 3cvr_A 158 --------------------LPTSLEVLSVRNNQLTF-LPE-LP--E--SLEALDVSTNLLE-SLPA---VPVRNHHSEE 207 (571)
T ss_dssp --------------------CCTTCCEEECCSSCCSC-CCC-CC--T--TCCEEECCSSCCS-SCCC---CC--------
T ss_pred --------------------cCCCcCEEECCCCCCCC-cch-hh--C--CCCEEECcCCCCC-chhh---HHHhhhcccc
Confidence 33445555555555543 333 32 2 2555555555555 3333 111 11
Q ss_pred cccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccc
Q 046240 286 VVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLT 333 (763)
Q Consensus 286 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 333 (763)
.|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..++
T Consensus 208 ~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 208 TEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred cceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 2266666666666 4566666667777777777777666666665543
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.6e-22 Score=212.70 Aligned_cols=130 Identities=22% Similarity=0.283 Sum_probs=75.7
Q ss_pred cCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCC
Q 046240 229 MGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGL 308 (763)
Q Consensus 229 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 308 (763)
+..+++|++|+|++|++++. +. +..+++ |++|++++|++++ ++ .+..+++|++|+|++|++++..+ +..+
T Consensus 103 ~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~--L~~L~l~~n~l~~-~~---~l~~l~~L~~L~l~~n~l~~~~~--l~~l 172 (308)
T 1h6u_A 103 IAGLQSIKTLDLTSTQITDV-TP-LAGLSN--LQVLYLDLNQITN-IS---PLAGLTNLQYLSIGNAQVSDLTP--LANL 172 (308)
T ss_dssp GTTCTTCCEEECTTSCCCCC-GG-GTTCTT--CCEEECCSSCCCC-CG---GGGGCTTCCEEECCSSCCCCCGG--GTTC
T ss_pred hcCCCCCCEEECCCCCCCCc-hh-hcCCCC--CCEEECCCCccCc-Cc---cccCCCCccEEEccCCcCCCChh--hcCC
Confidence 44444444444444444432 21 444433 5555555555542 22 14555666666666666664322 6666
Q ss_pred cCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCC
Q 046240 309 KDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGE 372 (763)
Q Consensus 309 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 372 (763)
++|+.|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|++++|++++.
T Consensus 173 ~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 173 SKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred CCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 777777777777764433 6667777777777777776543 66777777777777777653
No 344
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.5e-22 Score=198.59 Aligned_cols=183 Identities=22% Similarity=0.263 Sum_probs=103.2
Q ss_pred CCcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEccccc
Q 046240 64 VCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNR 143 (763)
Q Consensus 64 ~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~ 143 (763)
.|+|.+|.|+. ++++ .+|..+ .++|++|+|++|.++ .+|...+..+++|++|+|++|+
T Consensus 6 ~C~~~~v~c~~------------~~l~-~~p~~~--~~~l~~L~l~~n~l~-------~~~~~~~~~l~~L~~L~l~~n~ 63 (208)
T 2o6s_A 6 SCSGTTVECYS------------QGRT-SVPTGI--PAQTTYLDLETNSLK-------SLPNGVFDELTSLTQLYLGGNK 63 (208)
T ss_dssp EEETTEEECCS------------SCCS-SCCSCC--CTTCSEEECCSSCCC-------CCCTTTTTTCTTCSEEECCSSC
T ss_pred EECCCEEEecC------------CCcc-CCCCCC--CCCCcEEEcCCCccC-------cCChhhhcccccCcEEECCCCc
Confidence 47888888853 4444 344333 347777777777774 5666666667777777777777
Q ss_pred ccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCcccc
Q 046240 144 FSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITG 223 (763)
Q Consensus 144 i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~ 223 (763)
|++..+..|.++++|++|+|++|+|+++.+..|.+++ +|++|+|++|+|++
T Consensus 64 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-----------------------------~L~~L~L~~N~l~~ 114 (208)
T 2o6s_A 64 LQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLT-----------------------------QLKELALNTNQLQS 114 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-----------------------------TCCEEECCSSCCCC
T ss_pred cCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCcc-----------------------------CCCEEEcCCCcCcc
Confidence 7766556666677777777777776655554454444 45555555555554
Q ss_pred ccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCc
Q 046240 224 NIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPA 303 (763)
Q Consensus 224 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 303 (763)
..+..|..+++|++|+|++|++++..+..+..+++ |++|++++|.+.+. ++.|+.|+++.|+++|.+|.
T Consensus 115 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~--L~~L~l~~N~~~~~---------~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 115 LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS--LQYIWLHDNPWDCT---------CPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT--CCEEECCSCCBCCC---------TTTTHHHHHHHHHCTTTBBC
T ss_pred cCHhHhccCCcCCEEECCCCccceeCHHHhccCCC--ccEEEecCCCeecC---------CCCHHHHHHHHHhCCceeec
Confidence 44445555555555555555555444433444433 44555554444321 22344444444444444444
Q ss_pred ccCCC
Q 046240 304 TIGGL 308 (763)
Q Consensus 304 ~~~~l 308 (763)
.++.+
T Consensus 184 ~~~~l 188 (208)
T 2o6s_A 184 SAGSV 188 (208)
T ss_dssp TTSSB
T ss_pred cCccc
Confidence 44433
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=3e-22 Score=210.63 Aligned_cols=63 Identities=22% Similarity=0.399 Sum_probs=30.6
Q ss_pred cccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCC
Q 046240 281 IGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISG 347 (763)
Q Consensus 281 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 347 (763)
+..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 169 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 169 LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 3444445555555555443222 4445555555555555553322 4555555555555555544
No 346
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=4.7e-22 Score=205.72 Aligned_cols=147 Identities=15% Similarity=0.096 Sum_probs=117.6
Q ss_pred HHhccCcCceecccCCceEEEEEecCCceEEEEEeehhhH------------------HHHHHHHHHHHHHHhCCCCccc
Q 046240 473 ATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECA------------------RAMKSFEVECEVMKNIRHRNLV 534 (763)
Q Consensus 473 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~niv 534 (763)
....|.+.+.||+|+||.||+|...+|+.||+|+++.... .....+.+|++++++++ | +
T Consensus 88 ~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~ 164 (282)
T 1zar_A 88 SGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-L 164 (282)
T ss_dssp TTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-S
T ss_pred CCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-C
Confidence 3455667799999999999999888899999999864321 13466889999999999 4 5
Q ss_pred eEEeeeecCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcE
Q 046240 535 KIISGCSNDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIA 614 (763)
Q Consensus 535 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~ 614 (763)
++.+++.. +..++||||++|++|.+ +... ....++.|+++||.|| |+.+|+||||||+||+++ ++.+
T Consensus 165 ~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~~-------~~~~i~~qi~~~l~~l---H~~giiHrDlkp~NILl~-~~~v 231 (282)
T 1zar_A 165 AVPKVYAW-EGNAVLMELIDAKELYR-VRVE-------NPDEVLDMILEEVAKF---YHRGIVHGDLSQYNVLVS-EEGI 231 (282)
T ss_dssp SSCCEEEE-ETTEEEEECCCCEEGGG-CCCS-------CHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEE-TTEE
T ss_pred CcCeEEec-cceEEEEEecCCCcHHH-cchh-------hHHHHHHHHHHHHHHH---HHCCCEeCCCCHHHEEEE-CCcE
Confidence 56665443 56699999999999988 4221 2446999999999999 788999999999999999 9999
Q ss_pred EEeeecCceecCCCCCccccccccccccccCccccC
Q 046240 615 HLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGI 650 (763)
Q Consensus 615 kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 650 (763)
||+|||+++.. ..|+|||++.
T Consensus 232 kl~DFG~a~~~---------------~~~~a~e~l~ 252 (282)
T 1zar_A 232 WIIDFPQSVEV---------------GEEGWREILE 252 (282)
T ss_dssp EECCCTTCEET---------------TSTTHHHHHH
T ss_pred EEEECCCCeEC---------------CCCCHHHHHH
Confidence 99999998743 2467888763
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.6e-21 Score=220.18 Aligned_cols=189 Identities=24% Similarity=0.330 Sum_probs=133.6
Q ss_pred CccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCccccccccccc
Q 046240 133 NVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLE 212 (763)
Q Consensus 133 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~ 212 (763)
+|+.|+|++|.|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+ +++|++++ +|. +.+ +|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~----Ls~N~l~~-ip~-l~~---~L~ 123 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLD----ACDNRLST-LPE-LPA---SLK 123 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEE----CCSSCCSC-CCC-CCT---TCC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEE----ccCCCCCC-cch-hhc---CCC
Confidence 45555555555554 333231 44555555555555 233 2344455444 44555554 444 332 688
Q ss_pred EEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEc
Q 046240 213 RLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINL 292 (763)
Q Consensus 213 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~L 292 (763)
+|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++ |++|+|++|+|++ +|. +. ++|+.|+|
T Consensus 124 ~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~--L~~L~Ls~N~L~~-lp~---l~--~~L~~L~L 187 (571)
T 3cvr_A 124 HLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTS--LEVLSVRNNQLTF-LPE---LP--ESLEALDV 187 (571)
T ss_dssp EEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTT--CCEEECCSSCCSC-CCC---CC--TTCCEEEC
T ss_pred EEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCC--cCEEECCCCCCCC-cch---hh--CCCCEEEC
Confidence 99999999987 555 67899999999999996 665 3444 9999999999995 776 33 89999999
Q ss_pred ccccccccCCcccCCCcCc-------cEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhcc
Q 046240 293 SRNNFSGDIPATIGGLKDV-------QNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLY 358 (763)
Q Consensus 293 s~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 358 (763)
++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..|..+..+..
T Consensus 188 s~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 188 STNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred cCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 999999 5666 665 77 99999999999 57887888999999999999999999999888765
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=4.5e-21 Score=189.48 Aligned_cols=181 Identities=22% Similarity=0.239 Sum_probs=128.5
Q ss_pred CEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchh
Q 046240 104 TKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIE 183 (763)
Q Consensus 104 ~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 183 (763)
+.++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|.+++
T Consensus 10 ~~v~c~~~~l~-------~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--- 76 (208)
T 2o6s_A 10 TTVECYSQGRT-------SVPTGIP---AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT--- 76 (208)
T ss_dssp TEEECCSSCCS-------SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT---
T ss_pred CEEEecCCCcc-------CCCCCCC---CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCC---
Confidence 45666666664 5565443 4677777777777766666667777777777777777655444444433
Q ss_pred hhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccE
Q 046240 184 WLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDT 263 (763)
Q Consensus 184 ~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~ 263 (763)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++ |++
T Consensus 77 --------------------------~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~ 128 (208)
T 2o6s_A 77 --------------------------SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQ--LKD 128 (208)
T ss_dssp --------------------------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT--CCE
T ss_pred --------------------------CcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCc--CCE
Confidence 6778888888888777777888888888888888888766666777765 888
Q ss_pred EEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCccccccccccc
Q 046240 264 LSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTS 334 (763)
Q Consensus 264 L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 334 (763)
|+|++|++++..+. .+..+++|++|++++|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 129 L~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 129 LRLYQNQLKSVPDG--VFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp EECCSSCCSCCCTT--TTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred EECCCCccceeCHH--HhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 88888888755554 56777888888888887663 3456777777778887777777766654
No 349
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=1.4e-22 Score=216.27 Aligned_cols=243 Identities=16% Similarity=0.188 Sum_probs=180.4
Q ss_pred CCCEEEcCCCcccCCCccccCccccccccC--CCccEEEcccccccccCCCcccCCCCCCeeeecCcccccc-cccccCC
Q 046240 102 SLTKLALGYNSLVGNNSLSGSLPSRIDLAL--PNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGF-IPNTIGN 178 (763)
Q Consensus 102 ~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l--~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~ 178 (763)
.+++|++++|.+. +..+..+ ++++.|++++|.+++..+. +.++++|++|+|++|++++. ++..+
T Consensus 48 ~~~~l~l~~~~~~----------~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~-- 114 (336)
T 2ast_B 48 LWQTLDLTGKNLH----------PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGIL-- 114 (336)
T ss_dssp TSSEEECTTCBCC----------HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHH--
T ss_pred hheeeccccccCC----------HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHH--
Confidence 3667777776552 1222244 6677777777777665554 44567777777777766543 33333
Q ss_pred CCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccc-cccCC-CCcccccc
Q 046240 179 LRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELN-KLTGP-IPVTFGRL 256 (763)
Q Consensus 179 l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l 256 (763)
..++ +|++|+|++|++++..+..++.+++|++|+|++| .+++. ++..+.++
T Consensus 115 --------------------------~~~~-~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~ 167 (336)
T 2ast_B 115 --------------------------SQCS-KLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 167 (336)
T ss_dssp --------------------------TTBC-CCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHC
T ss_pred --------------------------hhCC-CCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcC
Confidence 3333 7888999999998888999999999999999999 68753 67778888
Q ss_pred CCCCccEEEecCC-ccccC-CCCccccccCC-cccEEEcccc--ccc-ccCCcccCCCcCccEEEccCcc-ccCcccccc
Q 046240 257 QNSKLDTLSLCGN-SFSGS-IPSCIDIGNLK-VVVEINLSRN--NFS-GDIPATIGGLKDVQNISLPYNR-LEGPIPESF 329 (763)
Q Consensus 257 ~~~~L~~L~L~~N-~l~~~-~p~~~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~ 329 (763)
++ |++|++++| .+++. ++. .+..++ +|++|++++| .++ +.+|..+..+++|+.|++++|. +++..+..+
T Consensus 168 ~~--L~~L~l~~~~~l~~~~~~~--~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 168 SR--LDELNLSWCFDFTEKHVQV--AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp TT--CCEEECCCCTTCCHHHHHH--HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred CC--CCEEcCCCCCCcChHHHHH--HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 76 999999999 88853 455 578899 9999999999 555 4567788899999999999999 777788899
Q ss_pred cccccccEEeCcCCc-cCCccchhhhhhccCceEEcccccCCCCCCCCC--Cc-cccccccccCCCcc
Q 046240 330 GYLTSLEILDLSNNK-ISGFILISLEKLLYLKKLNLSFNKLEGEIPRGG--PF-ANFTAKSFMGNEKL 393 (763)
Q Consensus 330 ~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~--~~-~~l~~~~~~~n~~~ 393 (763)
..+++|++|+|++|. +.......+..+++|+.|++++| ++..+ .+ ..+..+.+.+|...
T Consensus 244 ~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-----i~~~~~~~l~~~l~~L~l~~n~l~ 306 (336)
T 2ast_B 244 FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-----VPDGTLQLLKEALPHLQINCSHFT 306 (336)
T ss_dssp GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-----SCTTCHHHHHHHSTTSEESCCCSC
T ss_pred hCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-----cCHHHHHHHHhhCcceEEecccCc
Confidence 999999999999995 43333336888999999999999 33321 12 23666777666543
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=5.1e-22 Score=232.48 Aligned_cols=227 Identities=22% Similarity=0.211 Sum_probs=99.6
Q ss_pred CCChhhHHHHHHHHHhccCCCCcccccCCCC-CCCCCcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEc
Q 046240 30 SNITTDQQALLALEAHISYDPTNLLAQNWTS-NTSVCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLAL 108 (763)
Q Consensus 30 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~w~~-~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L 108 (763)
+....++++++++......+....-. .|.. .+..++|.++.++ ..+++.|+|.+|++.. .+..+ |+.++|
T Consensus 128 s~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~-~~~~~-----l~~l~L 198 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDSKTAKKQ-QPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDE-ANQAL-----LQHKKL 198 (727)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC--------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccccCcccC-CCcCCCCccccCCCceec--CCccceEEeeCCCCCc-chhhH-----hhcCcc
Confidence 34567888999998765432222222 4643 3456789998886 3689999999999985 34333 445555
Q ss_pred CCCcccCC----CccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhh
Q 046240 109 GYNSLVGN----NSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEW 184 (763)
Q Consensus 109 ~~n~l~~~----~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 184 (763)
+.|.|.+. +.+ .+|...+..+++|+.|+|++|.|+ .+|..+.++++|++|+|++|+|+ .+|..|++|++|+.
T Consensus 199 s~~~i~~~~~~~n~~--~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~ 274 (727)
T 4b8c_D 199 SQYSIDEDDDIENRM--VMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRV 274 (727)
T ss_dssp -------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCE
T ss_pred CcccccCccccccce--ecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCE
Confidence 55555321 111 245555556777777777777776 45555556777777777777776 56666677776666
Q ss_pred hhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEE
Q 046240 185 LGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTL 264 (763)
Q Consensus 185 L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L 264 (763)
|+ |++|+|+ .+|..|.++. +|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. .+..|
T Consensus 275 L~----Ls~N~l~-~lp~~~~~l~-~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~-~~~~l 346 (727)
T 4b8c_D 275 LD----LSHNRLT-SLPAELGSCF-QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV-TGLIF 346 (727)
T ss_dssp EE----CTTSCCS-SCCSSGGGGT-TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH-HHHHH
T ss_pred Ee----CcCCcCC-ccChhhcCCC-CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcch-hhhHH
Confidence 66 5666666 5566666666 6666666666665 45555666666666666666666666665544321 12235
Q ss_pred EecCCccccCCCC
Q 046240 265 SLCGNSFSGSIPS 277 (763)
Q Consensus 265 ~L~~N~l~~~~p~ 277 (763)
+|++|.+++.+|.
T Consensus 347 ~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 347 YLRDNRPEIPLPH 359 (727)
T ss_dssp HHHHCCCCCCCCC
T ss_pred hhccCcccCcCcc
Confidence 5666666655554
No 351
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=3.2e-20 Score=186.13 Aligned_cols=162 Identities=21% Similarity=0.223 Sum_probs=110.6
Q ss_pred CCCCCCCCcccceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEE
Q 046240 58 WTSNTSVCNWIGITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKAL 137 (763)
Q Consensus 58 w~~~~~~c~w~gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L 137 (763)
|..+...|+|.+|.|.. ++++ .+|..+. ++|++|+|++|.|+ .+++..+.++++|++|
T Consensus 12 ~~~~~~~Cs~~~v~c~~------------~~l~-~ip~~~~--~~L~~L~Ls~n~i~-------~~~~~~~~~l~~L~~L 69 (229)
T 3e6j_A 12 ACPSQCSCSGTTVDCRS------------KRHA-SVPAGIP--TNAQILYLHDNQIT-------KLEPGVFDSLINLKEL 69 (229)
T ss_dssp CCCTTCEEETTEEECTT------------SCCS-SCCSCCC--TTCSEEECCSSCCC-------CCCTTTTTTCTTCCEE
T ss_pred cCCCCCEEeCCEeEccC------------CCcC-ccCCCCC--CCCCEEEcCCCccC-------ccCHHHhhCccCCcEE
Confidence 55577899999999863 3344 4554443 77788888888775 4555556677778888
Q ss_pred EcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEee
Q 046240 138 SLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYIS 217 (763)
Q Consensus 138 ~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~ 217 (763)
+|++|+|+.+.+..|.++++|++|+|++|+|+++.+..|..+++|+.|+ +++|+++ .+|..+..+. +|++|+|+
T Consensus 70 ~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~----Ls~N~l~-~lp~~~~~l~-~L~~L~L~ 143 (229)
T 3e6j_A 70 YLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF----MCCNKLT-ELPRGIERLT-HLTHLALD 143 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE----CCSSCCC-SCCTTGGGCT-TCSEEECC
T ss_pred ECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe----ccCCccc-ccCcccccCC-CCCEEECC
Confidence 8888887766666777778888888888888776666677777666666 5566655 4455555555 66666666
Q ss_pred cCccccccccccCCccccceeecccccccC
Q 046240 218 NCSITGNIPQVMGNLSIFLLLDLELNKLTG 247 (763)
Q Consensus 218 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 247 (763)
+|+|++..+..|..+++|+.|+|++|.+..
T Consensus 144 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 144 QNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 666665555566666666666666666653
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.2e-20 Score=188.03 Aligned_cols=157 Identities=23% Similarity=0.226 Sum_probs=122.4
Q ss_pred ccEEEeecCccccccccccCCccccceeecccccccCCCC-ccccccCCCCccEEEecCCccccCCCCccccccCCcccE
Q 046240 211 LERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIP-VTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVE 289 (763)
Q Consensus 211 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~ 289 (763)
-+++++++|.++. +|..+. ..+++|+|++|+|++..| ..|..+++ |++|+|++|++++..+. .|.++++|++
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~--L~~L~L~~N~i~~i~~~--~~~~l~~L~~ 85 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQ--LRKINFSNNKITDIEEG--AFEGASGVNE 85 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTT--CCEEECCSSCCCEECTT--TTTTCTTCCE
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCC--CCEEECCCCcCCEECHH--HhCCCCCCCE
Confidence 3577788887774 455443 345778888888876644 34677765 88888888888866665 6788888888
Q ss_pred EEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccC
Q 046240 290 INLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKL 369 (763)
Q Consensus 290 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 369 (763)
|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.|..|..+++|+.|+|++|++
T Consensus 86 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 86 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp EECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred EECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 88888888877777788888888888888888877788888888888888888888888788888888888888888888
Q ss_pred CCCCC
Q 046240 370 EGEIP 374 (763)
Q Consensus 370 ~~~~p 374 (763)
++..+
T Consensus 166 ~c~c~ 170 (220)
T 2v70_A 166 NCNCY 170 (220)
T ss_dssp ECSGG
T ss_pred cCCCc
Confidence 87655
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=5e-20 Score=183.46 Aligned_cols=152 Identities=21% Similarity=0.269 Sum_probs=107.1
Q ss_pred EEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCe
Q 046240 81 ALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTI 160 (763)
Q Consensus 81 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 160 (763)
.+++++|+++ .+|..+. +.+++|+|++|.|+ +..|..+|..+++|++|+|++|+|+++.+..|.++++|++
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~------~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 85 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFT------VLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNE 85 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCC------EECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCC------ccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCE
Confidence 7888999998 4676654 35689999999886 2335667778899999999999999888888899999999
Q ss_pred eeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeec
Q 046240 161 LELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDL 240 (763)
Q Consensus 161 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 240 (763)
|+|++|+|+++.+..|.++++|++|+ |++|++++..|..|.++. +|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 86 L~Ls~N~l~~~~~~~~~~l~~L~~L~----Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 160 (220)
T 2v70_A 86 ILLTSNRLENVQHKMFKGLESLKTLM----LRSNRITCVGNDSFIGLS-SVRLLSLYDNQITTVAPGAFDTLHSLSTLNL 160 (220)
T ss_dssp EECCSSCCCCCCGGGGTTCSSCCEEE----CTTSCCCCBCTTSSTTCT-TCSEEECTTSCCCCBCTTTTTTCTTCCEEEC
T ss_pred EECCCCccCccCHhHhcCCcCCCEEE----CCCCcCCeECHhHcCCCc-cCCEEECCCCcCCEECHHHhcCCCCCCEEEe
Confidence 99999999888787787777666555 555555555555555554 5555555555555554555555555555555
Q ss_pred cccccc
Q 046240 241 ELNKLT 246 (763)
Q Consensus 241 ~~N~l~ 246 (763)
++|.+.
T Consensus 161 ~~N~l~ 166 (220)
T 2v70_A 161 LANPFN 166 (220)
T ss_dssp CSCCEE
T ss_pred cCcCCc
Confidence 555554
No 354
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=1.9e-22 Score=228.87 Aligned_cols=188 Identities=17% Similarity=0.192 Sum_probs=93.6
Q ss_pred cCCCccEEEcccccccccCCCcccCCCCCCeeeecCcc-------------cccccccccCCCCchhhhhhhhhccCCcc
Q 046240 130 ALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNS-------------FSGFIPNTIGNLRNIEWLGLVIGLIGNPL 196 (763)
Q Consensus 130 ~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~L~~~l~~n~l 196 (763)
.+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+. +..|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~---l~~n~~ 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDP---MRAAYL 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCG---GGHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcc---hhhccc
Confidence 4556666666666665 456666666666666665554 33444445555555554441 111111
Q ss_pred cccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCC
Q 046240 197 NGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIP 276 (763)
Q Consensus 197 ~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p 276 (763)
. +|..+.+++|.|+...+. .|+.|+|++|+|++ +|. +..+++ |+.|+|++|+|+ .+|
T Consensus 423 -----------~-~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~--L~~L~Ls~N~l~-~lp 479 (567)
T 1dce_A 423 -----------D-DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLL--VTHLDLSHNRLR-ALP 479 (567)
T ss_dssp -----------H-HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTT--CCEEECCSSCCC-CCC
T ss_pred -----------c-hhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-cccccc--CcEeecCccccc-ccc
Confidence 1 344444444444432221 24555555555553 333 444443 555555555555 444
Q ss_pred CccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcc-cccccccccccEEeCcCCccCCc
Q 046240 277 SCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPI-PESFGYLTSLEILDLSNNKISGF 348 (763)
Q Consensus 277 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ 348 (763)
. .++++++|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.. |..++.+++|+.|+|++|+|++.
T Consensus 480 ~--~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 480 P--ALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp G--GGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred h--hhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 4 44555555555555555553 33 4555555555555555555443 44555555555555555555543
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=5.2e-20 Score=183.38 Aligned_cols=151 Identities=22% Similarity=0.283 Sum_probs=103.4
Q ss_pred EEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCe
Q 046240 81 ALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTI 160 (763)
Q Consensus 81 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 160 (763)
.+++++++++ .+|..+. ++|++|+|++|.|+ .+|...|..+++|++|+|++|+|+++.|..|.++++|++
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~-------~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~ 84 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIK-------VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNS 84 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCC-------EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCE
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCC-------CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCE
Confidence 5667778888 5666554 67888888888885 677777778888888888888888888888888888888
Q ss_pred eeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeec
Q 046240 161 LELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDL 240 (763)
Q Consensus 161 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 240 (763)
|+|++|+|+.+.+..|.++++| ++|+|++|+|++..|..|..+++|++|+|
T Consensus 85 L~Ls~N~l~~l~~~~f~~l~~L-----------------------------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 85 LVLYGNKITELPKSLFEGLFSL-----------------------------QLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp EECCSSCCCCCCTTTTTTCTTC-----------------------------CEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred EECCCCcCCccCHhHccCCCCC-----------------------------CEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 8888888886666666666654 45555555555555555555555555555
Q ss_pred ccccccCCCCccccccCCCCccEEEecCCccc
Q 046240 241 ELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFS 272 (763)
Q Consensus 241 ~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~ 272 (763)
++|+|++..+..|..+++ |++|+|++|.+.
T Consensus 136 ~~N~l~~~~~~~~~~l~~--L~~L~L~~N~~~ 165 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRA--IQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCSCCCTTTTTTCTT--CCEEECCSSCEE
T ss_pred CCCcCCEECHHHHhCCCC--CCEEEeCCCCcC
Confidence 555555544445555544 555555555554
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=4.2e-20 Score=198.87 Aligned_cols=159 Identities=23% Similarity=0.174 Sum_probs=122.6
Q ss_pred cccEEEeecCccccccccccC-CccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCccc
Q 046240 210 SLERLYISNCSITGNIPQVMG-NLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVV 288 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~ 288 (763)
.+++|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++ |++|+|++|+|++..+. .|.++++|+
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~--L~~L~Ls~N~l~~~~~~--~~~~l~~L~ 115 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPN--LRYLDLSSNHLHTLDEF--LFSDLQALE 115 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTT--CCEEECCSSCCCEECTT--TTTTCTTCC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCC--CCEEECCCCcCCcCCHH--HhCCCcCCC
Confidence 567778888888777777776 7888888888888888766677777765 88888888888765555 577888888
Q ss_pred EEEcccccccccCCcccCCCcCccEEEccCccccCcccccc---cccccccEEeCcCCccCCccchhhhhhcc--CceEE
Q 046240 289 EINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESF---GYLTSLEILDLSNNKISGFILISLEKLLY--LKKLN 363 (763)
Q Consensus 289 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~ 363 (763)
+|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+.+.+..+..++. |+.|+
T Consensus 116 ~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~ 195 (361)
T 2xot_A 116 VLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLY 195 (361)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEE
T ss_pred EEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEE
Confidence 88888888887778888888888888888888886555555 56888888888888888877777887776 37788
Q ss_pred cccccCCCC
Q 046240 364 LSFNKLEGE 372 (763)
Q Consensus 364 l~~N~l~~~ 372 (763)
|++|++.+.
T Consensus 196 l~~N~~~C~ 204 (361)
T 2xot_A 196 LHNNPLECD 204 (361)
T ss_dssp CCSSCEECC
T ss_pred ecCCCccCC
Confidence 888877754
No 357
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=2.5e-22 Score=227.89 Aligned_cols=205 Identities=16% Similarity=0.153 Sum_probs=174.6
Q ss_pred cCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEccccc-------------ccccCCCcccCCCCCCeee-
Q 046240 97 IGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNR-------------FSGTIQSPITNASKLTILE- 162 (763)
Q Consensus 97 ~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~-------------i~~~~p~~~~~l~~L~~L~- 162 (763)
+..+++|+.|+|++|+++ .+|.++. ++++|+.|++++|. +.+.+|..++++++|+.|+
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-------~Lp~~i~-~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~ 416 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-------VLQSELE-SCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDP 416 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-------HHHHHHH-HHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCG
T ss_pred cccCccceeccCChhhHH-------hhHHHHH-HHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcc
Confidence 367899999999999995 8999987 89999999998886 6778888999999999999
Q ss_pred ecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeeccc
Q 046240 163 LGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLEL 242 (763)
Q Consensus 163 L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 242 (763)
++.|.+ ++|+.+. +.+|.++...+. .|++|+|++|+|++ +|. |+.+++|+.|+|++
T Consensus 417 l~~n~~-----------~~L~~l~----l~~n~i~~l~~~-------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~ 472 (567)
T 1dce_A 417 MRAAYL-----------DDLRSKF----LLENSVLKMEYA-------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSH 472 (567)
T ss_dssp GGHHHH-----------HHHHHHH----HHHHHHHHHHHT-------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCS
T ss_pred hhhccc-----------chhhhhh----hhcccccccCcc-------CceEEEecCCCCCC-CcC-ccccccCcEeecCc
Confidence 788765 3566666 567776653322 68999999999996 565 99999999999999
Q ss_pred ccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccC-CcccCCCcCccEEEccCccc
Q 046240 243 NKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDI-PATIGGLKDVQNISLPYNRL 321 (763)
Q Consensus 243 N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l 321 (763)
|+|+ .+|..+.++++ |+.|+|++|+|++ +| .++++++|+.|+|++|+|++.. |..|+.+++|+.|+|++|++
T Consensus 473 N~l~-~lp~~~~~l~~--L~~L~Ls~N~l~~-lp---~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 473 NRLR-ALPPALAALRC--LEVLQASDNALEN-VD---GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp SCCC-CCCGGGGGCTT--CCEEECCSSCCCC-CG---GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred cccc-ccchhhhcCCC--CCEEECCCCCCCC-Cc---ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 9999 88999999987 9999999999995 66 4899999999999999999887 99999999999999999999
Q ss_pred cCccccc---ccccccccEEeC
Q 046240 322 EGPIPES---FGYLTSLEILDL 340 (763)
Q Consensus 322 ~~~~p~~---~~~l~~L~~L~L 340 (763)
++.+|.. +..+++|+.|++
T Consensus 546 ~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 546 CQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCccHHHHHHHHCcccCccCC
Confidence 9765532 233677777764
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=2e-20 Score=186.35 Aligned_cols=154 Identities=20% Similarity=0.256 Sum_probs=92.3
Q ss_pred cEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEE
Q 046240 212 ERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEIN 291 (763)
Q Consensus 212 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~ 291 (763)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++ |++|+|++|++++..|. .|.++++|++|+
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~--L~~L~Ls~N~i~~~~~~--~~~~l~~L~~L~ 86 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKK--LRRIDLSNNQISELAPD--AFQGLRSLNSLV 86 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTT--CCEEECCSSCCCEECTT--TTTTCSSCCEEE
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCC--CCEEECCCCcCCCcCHH--HhhCCcCCCEEE
Confidence 34555555555 3333332 45556666666665544445555544 66666666666555455 556666666666
Q ss_pred cccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCC
Q 046240 292 LSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEG 371 (763)
Q Consensus 292 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 371 (763)
|++|+|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++.+..|..+++|+.|+|++|++.+
T Consensus 87 Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 87 LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 66666665545556666666666666666666666666666666666666666666666666666666666666666655
Q ss_pred C
Q 046240 372 E 372 (763)
Q Consensus 372 ~ 372 (763)
.
T Consensus 167 ~ 167 (220)
T 2v9t_B 167 D 167 (220)
T ss_dssp S
T ss_pred C
Confidence 3
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=4.6e-20 Score=198.53 Aligned_cols=182 Identities=20% Similarity=0.217 Sum_probs=117.4
Q ss_pred ceeecCCCCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccc-cCCCccEEEccccccccc
Q 046240 69 GITCDVNSHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDL-ALPNVKALSLAYNRFSGT 147 (763)
Q Consensus 69 gv~c~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~-~l~~L~~L~L~~N~i~~~ 147 (763)
++.|.. +.+++++++|+ .+|..+. +.++.|+|++|+|+ .++...|. ++++|++|+|++|+|+++
T Consensus 15 ~C~C~~-----~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~-------~l~~~~~~~~l~~L~~L~L~~N~i~~i 79 (361)
T 2xot_A 15 NCLCAS-----NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLS-------RLRAEWTPTRLTNLHSLLLSHNHLNFI 79 (361)
T ss_dssp TCEEET-----TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCC-------EECTTSSSSCCTTCCEEECCSSCCCEE
T ss_pred CCEECC-----CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCC-------ccChhhhhhcccccCEEECCCCcCCcc
Confidence 456753 36888899998 4676554 45888999988885 67777776 788888888888888888
Q ss_pred CCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCcccccccc
Q 046240 148 IQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQ 227 (763)
Q Consensus 148 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~ 227 (763)
.+..|.++++|++|+|++|+|+++.+..|.++++|+.|+ |++|+|++..|.
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~-----------------------------L~~N~i~~~~~~ 130 (361)
T 2xot_A 80 SSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL-----------------------------LYNNHIVVVDRN 130 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE-----------------------------CCSSCCCEECTT
T ss_pred ChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE-----------------------------CCCCcccEECHH
Confidence 888888888888888888888877777777776555554 444444444444
Q ss_pred ccCCccccceeecccccccCCCCccc---cccCCCCccEEEecCCccccCCCCccccccCCc--ccEEEccccccc
Q 046240 228 VMGNLSIFLLLDLELNKLTGPIPVTF---GRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKV--VVEINLSRNNFS 298 (763)
Q Consensus 228 ~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~--L~~L~Ls~N~l~ 298 (763)
.|.++++|+.|+|++|+|++..+..| ..+++ |+.|+|++|+|++..+. .+..++. |+.|+|++|++.
T Consensus 131 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~--L~~L~L~~N~l~~l~~~--~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 131 AFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPK--LMLLDLSSNKLKKLPLT--DLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp TTTTCTTCCEEECCSSCCCSCCGGGTC----CTT--CCEEECCSSCCCCCCHH--HHHHSCHHHHTTEECCSSCEE
T ss_pred HhCCcccCCEEECCCCcCCeeCHHHhcCcccCCc--CCEEECCCCCCCccCHH--HhhhccHhhcceEEecCCCcc
Confidence 55555555555555555553322223 23433 55555555555532222 3444444 356666666665
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=3.6e-20 Score=192.99 Aligned_cols=192 Identities=22% Similarity=0.293 Sum_probs=140.3
Q ss_pred CCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccc
Q 046240 132 PNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISL 211 (763)
Q Consensus 132 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L 211 (763)
.++..+.+..+.+++.. .+..+++|++|++++|.++.. + .+..++ +|
T Consensus 24 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~-----------------------------~L 70 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLP-----------------------------NV 70 (291)
T ss_dssp HHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCT-----------------------------TC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCC-----------------------------CC
Confidence 44555667777766433 345677888888888887743 2 233333 67
Q ss_pred cEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEE
Q 046240 212 ERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEIN 291 (763)
Q Consensus 212 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~ 291 (763)
++|+|++|++++..+ +..+++|++|+|++|++++ +| .+..+++ |++|+|++|++++ ++ .+..+++|+.|+
T Consensus 71 ~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~--L~~L~L~~n~i~~-~~---~l~~l~~L~~L~ 140 (291)
T 1h6t_A 71 TKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKK--LKSLSLEHNGISD-IN---GLVHLPQLESLY 140 (291)
T ss_dssp CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTT--CCEEECTTSCCCC-CG---GGGGCTTCCEEE
T ss_pred CEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCC--CCEEECCCCcCCC-Ch---hhcCCCCCCEEE
Confidence 777777777775544 7777778888888887774 33 3667765 8888888888874 33 477788888888
Q ss_pred cccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCC
Q 046240 292 LSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEG 371 (763)
Q Consensus 292 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 371 (763)
+++|++++. ..+..+++|+.|+|++|++++..+ +..+++|+.|+|++|+|+++ + .+..+++|+.|++++|+++.
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 888888864 578888888888888888886555 88888889999999888874 3 47888889999999998876
Q ss_pred C
Q 046240 372 E 372 (763)
Q Consensus 372 ~ 372 (763)
.
T Consensus 215 ~ 215 (291)
T 1h6t_A 215 K 215 (291)
T ss_dssp C
T ss_pred C
Confidence 4
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.2e-19 Score=178.89 Aligned_cols=157 Identities=21% Similarity=0.208 Sum_probs=128.2
Q ss_pred cccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccE
Q 046240 210 SLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVE 289 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~ 289 (763)
+.+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++ |++|+|++|++++..+. .|..+++|++
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~--L~~L~L~~N~l~~i~~~--~~~~l~~L~~ 92 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLIN--LKELYLGSNQLGALPVG--VFDSLTQLTV 92 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTT--CCEEECCSSCCCCCCTT--TTTTCTTCCE
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccC--CcEEECCCCCCCCcChh--hcccCCCcCE
Confidence 4567888888887 4554443 78888888888888877888888866 88888888888754444 5788888889
Q ss_pred EEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccC
Q 046240 290 INLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKL 369 (763)
Q Consensus 290 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 369 (763)
|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+++.+..|..+++|+.|+|++|++
T Consensus 93 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 93 LDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred EECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 999999888777777888889999999999988 6788888889999999999999888778888888999999999988
Q ss_pred CCCCC
Q 046240 370 EGEIP 374 (763)
Q Consensus 370 ~~~~p 374 (763)
++..+
T Consensus 172 ~c~c~ 176 (229)
T 3e6j_A 172 DCECR 176 (229)
T ss_dssp CTTBG
T ss_pred cCCcc
Confidence 87665
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.1e-19 Score=189.40 Aligned_cols=108 Identities=23% Similarity=0.356 Sum_probs=60.1
Q ss_pred cCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCC
Q 046240 229 MGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGL 308 (763)
Q Consensus 229 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 308 (763)
+..+++|++|+|++|++++. ..+..+++ |++|++++|++++. + .+..+++|++|++++|++++..| +..+
T Consensus 108 l~~l~~L~~L~L~~n~i~~~--~~l~~l~~--L~~L~l~~n~l~~~-~---~l~~l~~L~~L~L~~N~l~~~~~--l~~l 177 (291)
T 1h6t_A 108 LKDLKKLKSLSLEHNGISDI--NGLVHLPQ--LESLYLGNNKITDI-T---VLSRLTKLDTLSLEDNQISDIVP--LAGL 177 (291)
T ss_dssp GTTCTTCCEEECTTSCCCCC--GGGGGCTT--CCEEECCSSCCCCC-G---GGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred hccCCCCCEEECCCCcCCCC--hhhcCCCC--CCEEEccCCcCCcc-h---hhccCCCCCEEEccCCccccchh--hcCC
Confidence 44444444444444444422 23444433 55555555555532 2 35566666666666666664433 6666
Q ss_pred cCccEEEccCccccCcccccccccccccEEeCcCCccCCc
Q 046240 309 KDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGF 348 (763)
Q Consensus 309 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 348 (763)
++|+.|+|++|++++ ++ .+..+++|+.|++++|+++..
T Consensus 178 ~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 178 TKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp TTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred CccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 666777777776664 33 266677777777777766653
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=7.3e-20 Score=208.91 Aligned_cols=169 Identities=28% Similarity=0.381 Sum_probs=82.8
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|+|++|.|.. ++ .|..+++|+.|+|++|.|+ .+|+ +..+++|+.|+|++|.|++. ..+..++
T Consensus 43 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~-------~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~ 109 (605)
T 1m9s_A 43 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLT-------DIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLK 109 (605)
T ss_dssp TTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCC-------CCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCT
T ss_pred CCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCC-------CChh--hccCCCCCEEECcCCCCCCC--hhhccCC
Confidence 345555555555552 22 3555555555555555553 2332 33555555555555555532 2455555
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFL 236 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 236 (763)
+|++|+|++|+|+++ ..|..++ +|+.|+|++|+|++. ..|..+++|+
T Consensus 110 ~L~~L~Ls~N~l~~l--~~l~~l~-----------------------------~L~~L~Ls~N~l~~l--~~l~~l~~L~ 156 (605)
T 1m9s_A 110 KLKSLSLEHNGISDI--NGLVHLP-----------------------------QLESLYLGNNKITDI--TVLSRLTKLD 156 (605)
T ss_dssp TCCEEECTTSCCCCC--GGGGGCT-----------------------------TCSEEECCSSCCCCC--GGGGSCTTCS
T ss_pred CCCEEEecCCCCCCC--ccccCCC-----------------------------ccCEEECCCCccCCc--hhhcccCCCC
Confidence 555555555555532 2244444 455555555555533 3445555555
Q ss_pred eeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccc
Q 046240 237 LLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSG 299 (763)
Q Consensus 237 ~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~ 299 (763)
.|+|++|+|++..| +..+++ |+.|+|++|+|++ +| .+..+++|+.|+|++|++++
T Consensus 157 ~L~Ls~N~l~~~~~--l~~l~~--L~~L~Ls~N~i~~-l~---~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 157 TLSLEDNQISDIVP--LAGLTK--LQNLYLSKNHISD-LR---ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp EEECCSSCCCCCGG--GTTCTT--CCEEECCSSCCCB-CG---GGTTCTTCSEEECCSEEEEC
T ss_pred EEECcCCcCCCchh--hccCCC--CCEEECcCCCCCC-Ch---HHccCCCCCEEEccCCcCcC
Confidence 55555555554333 444433 5555555555542 22 24445555555555555543
No 364
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.80 E-value=1.4e-21 Score=225.42 Aligned_cols=66 Identities=9% Similarity=0.063 Sum_probs=33.8
Q ss_pred CceEEEEecCCCCCCc----CCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEccccccc
Q 046240 77 HRVTALNISSLNLQGE----IPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFS 145 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~ 145 (763)
.++++|+|++|.+++. ++..+..+++|++|+|++|.+++.. .+.++ .++.++++|++|+|++|.+.
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~--~~~l~-~~~~~~~~L~~L~L~~~~~~ 233 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKIS--PKDLE-TIARNCRSLVSVKVGDFEIL 233 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCC--HHHHH-HHHHHCTTCCEEECSSCBGG
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccC--HHHHH-HHHhhCCCCcEEeccCccHH
Confidence 4567777777766544 2334455666666666666653100 00111 12234556666666665554
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=3.8e-20 Score=211.19 Aligned_cols=190 Identities=22% Similarity=0.311 Sum_probs=91.3
Q ss_pred ccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccE
Q 046240 134 VKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLER 213 (763)
Q Consensus 134 L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~ 213 (763)
+..+.++.+.++...+ +..+++|+.|+|++|.|+.+ + .|..+++|+.|+ |++|.+++..| +..+. +|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~----Ls~N~l~~~~~--l~~l~-~L~~ 91 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLF----LNGNKLTDIKP--LTNLK-NLGW 91 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEE----CTTSCCCCCGG--GGGCT-TCCE
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEE----eeCCCCCCChh--hccCC-CCCE
Confidence 4444444444443322 34455555555555555432 1 234444333333 33333333222 33333 5555
Q ss_pred EEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcc
Q 046240 214 LYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLS 293 (763)
Q Consensus 214 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls 293 (763)
|+|++|+|++ +| .+..+++|+.|+|++|+|++. ..+..+++ |+.|+|++|++++. + .+..+++|+.|+|+
T Consensus 92 L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~--L~~L~Ls~N~l~~l-~---~l~~l~~L~~L~Ls 161 (605)
T 1m9s_A 92 LFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQ--LESLYLGNNKITDI-T---VLSRLTKLDTLSLE 161 (605)
T ss_dssp EECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTT--CSEEECCSSCCCCC-G---GGGSCTTCSEEECC
T ss_pred EECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCc--cCEEECCCCccCCc-h---hhcccCCCCEEECc
Confidence 5555555553 22 455555555555555555532 23444443 55555555555532 1 34555555555555
Q ss_pred cccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCc
Q 046240 294 RNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGF 348 (763)
Q Consensus 294 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 348 (763)
+|+|++..| +..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.
T Consensus 162 ~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 162 DNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred CCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 555554433 55555555555555555532 2 355555555555555555543
No 366
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.79 E-value=4.7e-22 Score=229.34 Aligned_cols=182 Identities=10% Similarity=0.073 Sum_probs=112.7
Q ss_pred ceEEEEecCCC-CCC-cCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccc----cCCCc
Q 046240 78 RVTALNISSLN-LQG-EIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSG----TIQSP 151 (763)
Q Consensus 78 ~v~~L~L~~~~-l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~----~~p~~ 151 (763)
++++|+|++|. ++. .++..+..+++|++|+|++|.+++... ..++ .+...+++|++|+|++|.+++ .++..
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~--~~l~-~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~ 215 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDG--KWLH-ELAQHNTSLEVLNFYMTEFAKISPKDLETI 215 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCS--HHHH-HHHHHCCCCCEEECTTCCCSSCCHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcch--hHHH-HHHhcCCCccEEEeeccCCCccCHHHHHHH
Confidence 49999999886 221 122334578999999999998752100 0022 233478899999999999873 34455
Q ss_pred ccCCCCCCeeeecCcccccccccccCCCCchhhhhhhh-----------------------hccCCcccccCCccccccc
Q 046240 152 ITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVI-----------------------GLIGNPLNGILPSSIVNLS 208 (763)
Q Consensus 152 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-----------------------~l~~n~l~~~~p~~~~~l~ 208 (763)
+.++++|++|+|++|.+.+ +|..+.++++|+.|+++. ++.++ ..+.+|..+..++
T Consensus 216 ~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~-~~~~l~~~~~~~~ 293 (592)
T 3ogk_B 216 ARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM-GPNEMPILFPFAA 293 (592)
T ss_dssp HHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC-CTTTGGGGGGGGG
T ss_pred HhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc-chhHHHHHHhhcC
Confidence 6678999999999998875 556666666776666320 01111 1233455555565
Q ss_pred ccccEEEeecCccccccc-cccCCccccceeecccccccCCCCccccccCCCCccEEEec
Q 046240 209 ISLERLYISNCSITGNIP-QVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLC 267 (763)
Q Consensus 209 ~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~ 267 (763)
+|++|+|++|.+++... ..+..+++|++|+|++|...+.++..+..+++ |++|+++
T Consensus 294 -~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~--L~~L~L~ 350 (592)
T 3ogk_B 294 -QIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQ--LKRLRIE 350 (592)
T ss_dssp -GCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTT--CCEEEEE
T ss_pred -CCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCC--CCEEEee
Confidence 88888888888765443 33567777777777733222222333334443 6666666
No 367
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=1.9e-19 Score=191.14 Aligned_cols=278 Identities=13% Similarity=0.110 Sum_probs=178.3
Q ss_pred CceEEEEecCCCCCCcCCcccCC-CCCCCEEEcCCCccc--CC--Ccccc---------Ccccccccc--------CCCc
Q 046240 77 HRVTALNISSLNLQGEIPHEIGY-LPSLTKLALGYNSLV--GN--NSLSG---------SLPSRIDLA--------LPNV 134 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~-l~~L~~L~L~~n~l~--~~--~~~~~---------~lp~~~~~~--------l~~L 134 (763)
.+++.|.++++ +.+.--..+.. +++|++|||++|+|. .. ..+.+ .||+..|.+ +++|
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L 103 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTL 103 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTC
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCC
Confidence 35677777654 21111122333 677888888888875 10 11111 567777877 8888
Q ss_pred cEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCccccccccccc-E
Q 046240 135 KALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLE-R 213 (763)
Q Consensus 135 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~-~ 213 (763)
+.|+|.+ .++.+.+.+|.++++|+.|++++|.++.+.+.+|.++.++..+.+............-+..|.+.. +|+ .
T Consensus 104 ~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~-~L~~~ 181 (329)
T 3sb4_A 104 EKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE-PLETT 181 (329)
T ss_dssp CC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC-CCEEE
T ss_pred cEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccc-cccee
Confidence 8888888 788777788888888888888888888788888888777776653211111122222333444444 454 4
Q ss_pred EEeecCc-cccccccccCCccccceeecccccccCCCCcccc-ccCCCCccEEEecCCccccCCCCccccccCCcccEEE
Q 046240 214 LYISNCS-ITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFG-RLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEIN 291 (763)
Q Consensus 214 L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~ 291 (763)
+.+.... +.......-....+++.+.+.++-.. .....+. .+.+ |+.|+|++|+++ .+|.. .|.++++|+.|+
T Consensus 182 i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~--L~~l~L~~n~i~-~I~~~-aF~~~~~L~~l~ 256 (329)
T 3sb4_A 182 IQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPN--LVSLDISKTNAT-TIPDF-TFAQKKYLLKIK 256 (329)
T ss_dssp EEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTT--CCEEECTTBCCC-EECTT-TTTTCTTCCEEE
T ss_pred EEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCC--CeEEECCCCCcc-eecHh-hhhCCCCCCEEE
Confidence 4443322 11111111123455566666554222 1111111 2433 888888888888 44442 688888888888
Q ss_pred cccccccccCCcccCCCcCcc-EEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEc
Q 046240 292 LSRNNFSGDIPATIGGLKDVQ-NISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNL 364 (763)
Q Consensus 292 Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 364 (763)
|++| ++.+.+.+|.++++|+ .|++.+ +++...+.+|.++++|+.|++++|+++.+.+.+|.++++|+.++.
T Consensus 257 l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 257 LPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 8887 7777788888888888 888888 677666788888888888888888888888888888888888764
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=1e-18 Score=178.96 Aligned_cols=163 Identities=23% Similarity=0.330 Sum_probs=126.2
Q ss_pred ccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCc
Q 046240 191 LIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNS 270 (763)
Q Consensus 191 l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~ 270 (763)
+.+|.+++.. .+..+. +|++|++++|+++. ++ .+..+++|++|+|++|+|++..| +..+++ |++|+|++|+
T Consensus 26 l~~~~i~~~~--~~~~l~-~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~--L~~L~L~~N~ 96 (263)
T 1xeu_A 26 LGKQSVTDLV--SQKELS-GVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTK--LEELSVNRNR 96 (263)
T ss_dssp HTCSCTTSEE--CHHHHT-TCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSS--CCEEECCSSC
T ss_pred hcCCCccccc--chhhcC-cCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCC--CCEEECCCCc
Confidence 4445444332 344454 78888888888874 44 67888888888888888885544 777766 8888888888
Q ss_pred cccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccc
Q 046240 271 FSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFIL 350 (763)
Q Consensus 271 l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 350 (763)
+++ +|. +.. ++|++|+|++|++++. ..+..+++|+.|+|++|++++. + .+..+++|+.|+|++|++++.
T Consensus 97 l~~-l~~---~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 97 LKN-LNG---IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp CSC-CTT---CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred cCC-cCc---ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 884 554 223 8899999999999863 3588899999999999999854 4 688899999999999999986
Q ss_pred hhhhhhccCceEEcccccCCCCC
Q 046240 351 ISLEKLLYLKKLNLSFNKLEGEI 373 (763)
Q Consensus 351 ~~~~~l~~L~~L~l~~N~l~~~~ 373 (763)
..+..+++|+.|++++|++++.+
T Consensus 166 ~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 166 GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TTSTTCCCCCEEEEEEEEEECCC
T ss_pred HHhccCCCCCEEeCCCCcccCCc
Confidence 67888999999999999998764
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2.6e-18 Score=167.95 Aligned_cols=154 Identities=19% Similarity=0.288 Sum_probs=132.0
Q ss_pred ccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccC
Q 046240 205 VNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNL 284 (763)
Q Consensus 205 ~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l 284 (763)
..+. +|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++ |++|++++|++++..|. .+..+
T Consensus 41 ~~l~-~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~--L~~L~l~~n~l~~~~~~--~l~~l 111 (197)
T 4ezg_A 41 AQMN-SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSN--LERLRIMGKDVTSDKIP--NLSGL 111 (197)
T ss_dssp HHHH-TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTT--CCEEEEECTTCBGGGSC--CCTTC
T ss_pred hhcC-CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCC--CCEEEeECCccCcccCh--hhcCC
Confidence 4555 8999999999999 555 6899999999999999876 3347888876 99999999999977777 78999
Q ss_pred CcccEEEcccccccccCCcccCCCcCccEEEccCcc-ccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEE
Q 046240 285 KVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNR-LEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLN 363 (763)
Q Consensus 285 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 363 (763)
++|++|+|++|++++..|..++.+++|+.|++++|+ ++ .+| .+..+++|+.|++++|+++++. .+..+++|+.|+
T Consensus 112 ~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~ 187 (197)
T 4ezg_A 112 TSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLY 187 (197)
T ss_dssp TTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEE
T ss_pred CCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEE
Confidence 999999999999998889999999999999999998 66 555 6899999999999999999844 788999999999
Q ss_pred cccccCCC
Q 046240 364 LSFNKLEG 371 (763)
Q Consensus 364 l~~N~l~~ 371 (763)
+++|++.+
T Consensus 188 l~~N~i~~ 195 (197)
T 4ezg_A 188 AFSQTIGG 195 (197)
T ss_dssp ECBC----
T ss_pred eeCcccCC
Confidence 99999864
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.3e-19 Score=212.22 Aligned_cols=186 Identities=22% Similarity=0.240 Sum_probs=67.5
Q ss_pred CCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCC
Q 046240 101 PSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLR 180 (763)
Q Consensus 101 ~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 180 (763)
+.++.|+|.+|.+. .+|..+ |+.++|+.|.|++ ++++.|++. ..|+.|..++
T Consensus 173 ~~~~~l~L~~n~~~-------~~~~~~------l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~ 224 (727)
T 4b8c_D 173 PLTPKIELFANGKD-------EANQAL------LQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQ 224 (727)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred CccceEEeeCCCCC-------cchhhH------hhcCccCcccccC--------------cccccccee-cChhhhccCC
Confidence 45677777777764 233222 4455555555442 233333333 3344444444
Q ss_pred chhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCC
Q 046240 181 NIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSK 260 (763)
Q Consensus 181 ~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~ 260 (763)
+|+.|+ |++|.+. .+|..++++. +|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|.++.+
T Consensus 225 ~L~~L~----Ls~n~l~-~l~~~~~~l~-~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~-- 294 (727)
T 4b8c_D 225 LWHALD----LSNLQIF-NISANIFKYD-FLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQ-- 294 (727)
T ss_dssp CCCEEE----CTTSCCS-CCCGGGGGCC-SCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTT--
T ss_pred CCcEEE----CCCCCCC-CCChhhcCCC-CCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCC--
Confidence 444444 3334333 3333344443 5555555555555 44555555555555555555555 44555555544
Q ss_pred ccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcC-ccEEEccCccccCcccc
Q 046240 261 LDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKD-VQNISLPYNRLEGPIPE 327 (763)
Q Consensus 261 L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~ 327 (763)
|++|+|++|.|+ .+|. .|.++++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 295 L~~L~L~~N~l~-~lp~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 295 LKYFYFFDNMVT-TLPW--EFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CSEEECCSSCCC-CCCS--STTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCEEECCCCCCC-ccCh--hhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 555555555554 4444 4555555555555555555555554443321 12345555555555444
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=3e-19 Score=183.04 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=17.1
Q ss_pred cCCCccEEEcccccccccCCCcccCCCCCCeeeecCccccc
Q 046240 130 ALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSG 170 (763)
Q Consensus 130 ~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 170 (763)
.+++|++|++++|.|+. +| .+..+++|++|+|++|+|++
T Consensus 39 ~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~ 77 (263)
T 1xeu_A 39 ELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD 77 (263)
T ss_dssp HHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC
T ss_pred hcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC
Confidence 34444444444444442 22 34444444444444444443
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.8e-18 Score=168.37 Aligned_cols=129 Identities=25% Similarity=0.297 Sum_probs=70.3
Q ss_pred cEEEeecCccccccccccCCccccceeecccccccCCCCc-cccccCCCCccEEEecCCccccCCCCccccccCCcccEE
Q 046240 212 ERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPV-TFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEI 290 (763)
Q Consensus 212 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L 290 (763)
+++++++|+++ .+|..+.. +|++|+|++|+|++..+. .|..+++ |++|+|++|++++..|. .|.++++|++|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~--L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L 83 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPH--LVKLELKRNQLTGIEPN--AFEGASHIQEL 83 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTT--CCEEECCSSCCCCBCTT--TTTTCTTCCEE
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCC--CCEEECCCCCCCCcCHh--HcCCcccCCEE
Confidence 45666666665 34443322 556666666666544433 2555544 55555555555554454 45555555555
Q ss_pred EcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCC
Q 046240 291 NLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISG 347 (763)
Q Consensus 291 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 347 (763)
+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|++.+
T Consensus 84 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 555555555555555555555555555555555555555555555555555555554
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=4.3e-18 Score=166.43 Aligned_cols=150 Identities=15% Similarity=0.263 Sum_probs=91.8
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.|++++|+++ .+| .+..+++|++|++++|.++ .++ .+..+++|++|+|++|.+++..+..|.+++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-------~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 112 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-------NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLT 112 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-------CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCT
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-------cch--hhhcCCCCCEEEeECCccCcccChhhcCCC
Confidence 36777888888777 455 5777777888888777663 222 233677777777777777766677777777
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCc-cccccccccCCcccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCS-ITGNIPQVMGNLSIF 235 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~-l~~~~~~~~~~l~~L 235 (763)
+|++|+|++|++++..|..|+++++|+ +|+|++|+ ++ .+| .+..+++|
T Consensus 113 ~L~~L~Ls~n~i~~~~~~~l~~l~~L~-----------------------------~L~L~~n~~i~-~~~-~l~~l~~L 161 (197)
T 4ezg_A 113 SLTLLDISHSAHDDSILTKINTLPKVN-----------------------------SIDLSYNGAIT-DIM-PLKTLPEL 161 (197)
T ss_dssp TCCEEECCSSBCBGGGHHHHTTCSSCC-----------------------------EEECCSCTBCC-CCG-GGGGCSSC
T ss_pred CCCEEEecCCccCcHhHHHHhhCCCCC-----------------------------EEEccCCCCcc-ccH-hhcCCCCC
Confidence 777777777777766666666665554 55555554 33 223 35555555
Q ss_pred ceeecccccccCCCCccccccCCCCccEEEecCCccc
Q 046240 236 LLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFS 272 (763)
Q Consensus 236 ~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~ 272 (763)
++|++++|++++ ++ .+..+++ |++|++++|++.
T Consensus 162 ~~L~l~~n~i~~-~~-~l~~l~~--L~~L~l~~N~i~ 194 (197)
T 4ezg_A 162 KSLNIQFDGVHD-YR-GIEDFPK--LNQLYAFSQTIG 194 (197)
T ss_dssp CEEECTTBCCCC-CT-TGGGCSS--CCEEEECBC---
T ss_pred CEEECCCCCCcC-hH-HhccCCC--CCEEEeeCcccC
Confidence 555555555553 22 4445543 566666665554
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=1.9e-18 Score=176.46 Aligned_cols=136 Identities=20% Similarity=0.248 Sum_probs=105.5
Q ss_pred cCcCceecccCCceEEEEEe-cCCce--EEEEEeehhhH------------------------HHHHHHHHHHHHHHhCC
Q 046240 477 FGRDNLIGIGSFGYVYKAEL-DDGIE--VAIKVFHQECA------------------------RAMKSFEVECEVMKNIR 529 (763)
Q Consensus 477 ~~~~~~lg~G~~g~v~~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l~ 529 (763)
|.+.+.||+|+||.||+|.. .+|+. ||||+++.... .....+.+|+.+++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999987 68889 99998753211 11236788999999998
Q ss_pred CCcc--ceEEeeeecCCceEEEEEccCC-C----ChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-CCCeEeCCC
Q 046240 530 HRNL--VKIISGCSNDDFKALVLEYMPN-G----SLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRH-TTPIIHCDL 601 (763)
Q Consensus 530 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h-~~~ivH~dl 601 (763)
|+++ ..++++ +..++||||+.+ | +|.++... .+......++.|+++++.|| | +.+|+||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~l---H~~~givHrDl 197 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRL---YQEAELVHADL 197 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHH---HHTSCEECSSC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHH---HHHCCEEeCCC
Confidence 8764 344432 357899999942 4 56655432 12335678999999999999 6 889999999
Q ss_pred CCCCEEecCCCcEEEeeecCceec
Q 046240 602 KSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 602 k~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
||+|||++. .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999764
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.8e-17 Score=161.25 Aligned_cols=156 Identities=26% Similarity=0.293 Sum_probs=119.9
Q ss_pred ceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEE
Q 046240 236 LLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNIS 315 (763)
Q Consensus 236 ~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 315 (763)
+.+++++|+++ .+|..+.. ++++|++++|++++..+. ..+..+++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~----~l~~L~l~~n~i~~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL----HTTELLLNDNELGRISSD-GLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT----TCSEEECCSCCCCSBCCS-CSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CEEEcCCCCcC-cCccCCCC----CCCEEECCCCcCCccCCc-cccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 67888888887 66765543 388899999988855543 1378888899999999999888888888889999999
Q ss_pred ccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCCCCCCCccccccccccCCCcccC
Q 046240 316 LPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCG 395 (763)
Q Consensus 316 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~~~~~~n~~~c~ 395 (763)
|++|+|++..+..|..+++|++|+|++|+|+++.|..|..+++|+.|+|++|++++..+...-...+....+.++...|+
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 99999988777888888899999999999988888888888889999999998888765321111223334455556676
Q ss_pred CC
Q 046240 396 LP 397 (763)
Q Consensus 396 ~p 397 (763)
.|
T Consensus 165 ~P 166 (192)
T 1w8a_A 165 AP 166 (192)
T ss_dssp SS
T ss_pred CC
Confidence 55
No 376
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.72 E-value=3.5e-20 Score=213.67 Aligned_cols=282 Identities=13% Similarity=0.096 Sum_probs=143.8
Q ss_pred CceEEEEecCC-CCCCc-CCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEccccc--cccc-CCCc
Q 046240 77 HRVTALNISSL-NLQGE-IPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNR--FSGT-IQSP 151 (763)
Q Consensus 77 ~~v~~L~L~~~-~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~--i~~~-~p~~ 151 (763)
.++++|+|++| .++.. ++..+.++++|++|+|++|.+++... ..+ ..+...+++|++|+|++|. ++.. ++..
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~--~~l-~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l 206 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSG--HWL-SHFPDTYTSLVSLNISCLASEVSFSALERL 206 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCG--GGG-GGSCTTCCCCCEEECTTCCSCCCHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcch--HHH-HHHhhcCCcCcEEEecccCCcCCHHHHHHH
Confidence 57888999888 55432 34445578889999998888752110 011 1222356788888888876 2211 1112
Q ss_pred ccCCCCCCeeeecCc-ccccccccccCCCCchhhhhhhhh---------------------------ccCCcccccCCcc
Q 046240 152 ITNASKLTILELGGN-SFSGFIPNTIGNLRNIEWLGLVIG---------------------------LIGNPLNGILPSS 203 (763)
Q Consensus 152 ~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~~---------------------------l~~n~l~~~~p~~ 203 (763)
+.++++|++|+|++| .+++ +|..+..+++|+.|++... +.+ ...+.++..
T Consensus 207 ~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~-~~~~~l~~~ 284 (594)
T 2p1m_B 207 VTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWD-AVPAYLPAV 284 (594)
T ss_dssp HHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBT-CCGGGGGGG
T ss_pred HHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcc-cchhhHHHH
Confidence 234578888888877 3333 5555556666665542100 110 011123333
Q ss_pred cccccccccEEEeecCccccccc-cccCCccccceeecccccccCC-CCccccccCCCCccEEEecC---------Cccc
Q 046240 204 IVNLSISLERLYISNCSITGNIP-QVMGNLSIFLLLDLELNKLTGP-IPVTFGRLQNSKLDTLSLCG---------NSFS 272 (763)
Q Consensus 204 ~~~l~~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~~~L~~L~L~~---------N~l~ 272 (763)
+..++ +|++|+|++|.+++... ..+..+++|++|++++| ++.. ++.....+++ |++|++++ |.++
T Consensus 285 ~~~~~-~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~--L~~L~L~~~~~~g~~~~~~l~ 360 (594)
T 2p1m_B 285 YSVCS-RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKD--LRELRVFPSEPFVMEPNVALT 360 (594)
T ss_dssp HHHHT-TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTT--CCEEEEECSCTTCSSCSSCCC
T ss_pred HHhhC-CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCC--CCEEEEecCcccccccCCCCC
Confidence 33445 78888888888764332 23567788888888877 4321 1212223443 77776632 3333
Q ss_pred cCCCCcccc-ccCCcccEEEcccccccccCCcccC-CCcCccEEEcc--C----ccccCc-----ccccccccccccEEe
Q 046240 273 GSIPSCIDI-GNLKVVVEINLSRNNFSGDIPATIG-GLKDVQNISLP--Y----NRLEGP-----IPESFGYLTSLEILD 339 (763)
Q Consensus 273 ~~~p~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~ 339 (763)
+.... .+ .++++|++|+++.|++++..+..+. .+++|+.|+++ + |.+++. ++..+..+++|+.|+
T Consensus 361 ~~~l~--~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~ 438 (594)
T 2p1m_B 361 EQGLV--SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLS 438 (594)
T ss_dssp HHHHH--HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEE
T ss_pred HHHHH--HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEe
Confidence 21111 11 1245555555555555544333333 35555555555 2 334311 111133444555555
Q ss_pred CcCCccCCccchhhhh-hccCceEEcccccCC
Q 046240 340 LSNNKISGFILISLEK-LLYLKKLNLSFNKLE 370 (763)
Q Consensus 340 L~~N~l~~~~~~~~~~-l~~L~~L~l~~N~l~ 370 (763)
|++ .+++..+..+.. +++|+.|+|++|.++
T Consensus 439 L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~ 469 (594)
T 2p1m_B 439 LSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDS 469 (594)
T ss_dssp CCS-SCCHHHHHHHHHHCTTCCEEEEESCCSS
T ss_pred ecC-cccHHHHHHHHHhchhccEeeccCCCCc
Confidence 544 344333333333 444555555555543
No 377
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.72 E-value=6.3e-20 Score=211.54 Aligned_cols=298 Identities=13% Similarity=0.078 Sum_probs=202.5
Q ss_pred CceEEEEecCCCCCCcCCcccC-CCCCCCEEEcCCC-cccCCCccccCccccccccCCCccEEEcccccccccCCCccc-
Q 046240 77 HRVTALNISSLNLQGEIPHEIG-YLPSLTKLALGYN-SLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPIT- 153 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~-~l~~L~~L~L~~n-~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~- 153 (763)
.++++|+|++|.+++..+..+. .+++|++|+|++| .++ ..-...+..++++|++|+|++|.+++..+..+.
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~------~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~ 178 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFS------TDGLAAIAATCRNLKELDLRESDVDDVSGHWLSH 178 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEE------HHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGG
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCC------HHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHH
Confidence 5789999999988877777775 6889999999988 442 111223334789999999999998876554443
Q ss_pred ---CCCCCCeeeecCcc--ccc-ccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCc-------
Q 046240 154 ---NASKLTILELGGNS--FSG-FIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCS------- 220 (763)
Q Consensus 154 ---~l~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~------- 220 (763)
.+++|++|+|++|. ++. .++..+.++++|+.|+ +.+|...+.+|..+..++ +|++|+++.+.
T Consensus 179 ~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~----L~~~~~~~~l~~~~~~~~-~L~~L~l~~~~~~~~~~~ 253 (594)
T 2p1m_B 179 FPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLK----LNRAVPLEKLATLLQRAP-QLEELGTGGYTAEVRPDV 253 (594)
T ss_dssp SCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEE----CCTTSCHHHHHHHHHHCT-TCSEEECSBCCCCCCHHH
T ss_pred HhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEe----cCCCCcHHHHHHHHhcCC-cceEcccccccCccchhh
Confidence 66789999999997 321 1222234568888888 667633333666666666 88888765542
Q ss_pred -------------------ccc----ccccccCCccccceeecccccccCCCCc-cccccCCCCccEEEecCCccccC-C
Q 046240 221 -------------------ITG----NIPQVMGNLSIFLLLDLELNKLTGPIPV-TFGRLQNSKLDTLSLCGNSFSGS-I 275 (763)
Q Consensus 221 -------------------l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~~~L~~L~L~~N~l~~~-~ 275 (763)
+.. .++..+..+++|++|+|++|.+++.... .+..+++ |+.|++++| +... +
T Consensus 254 ~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~--L~~L~l~~~-~~~~~l 330 (594)
T 2p1m_B 254 YSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPK--LQRLWVLDY-IEDAGL 330 (594)
T ss_dssp HHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTT--CCEEEEEGG-GHHHHH
T ss_pred HHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCC--cCEEeCcCc-cCHHHH
Confidence 111 2333344679999999999998743322 2456655 999999998 4421 2
Q ss_pred CCccccccCCcccEEEcc---------cccccccCCcccC-CCcCccEEEccCccccCccccccc-ccccccEEeCc--C
Q 046240 276 PSCIDIGNLKVVVEINLS---------RNNFSGDIPATIG-GLKDVQNISLPYNRLEGPIPESFG-YLTSLEILDLS--N 342 (763)
Q Consensus 276 p~~~~~~~l~~L~~L~Ls---------~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~--~ 342 (763)
+. ....+++|++|+++ .|.++......+. ++++|+.|.++.|++++..+..+. .+++|+.|+|+ +
T Consensus 331 ~~--l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~ 408 (594)
T 2p1m_B 331 EV--LASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIE 408 (594)
T ss_dssp HH--HHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESS
T ss_pred HH--HHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeeccc
Confidence 22 23358899999994 3566544333343 489999999999999877666665 58999999999 5
Q ss_pred ----CccCCc-----cchhhhhhccCceEEcccccCCCCCCCC-C-CccccccccccCCC
Q 046240 343 ----NKISGF-----ILISLEKLLYLKKLNLSFNKLEGEIPRG-G-PFANFTAKSFMGNE 391 (763)
Q Consensus 343 ----N~l~~~-----~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~-~~~~l~~~~~~~n~ 391 (763)
|.++.. .+..+..+++|+.|+|++ .++...+.. . ..+++..+++.+|.
T Consensus 409 ~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~ 467 (594)
T 2p1m_B 409 PKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAG 467 (594)
T ss_dssp TTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCC
Confidence 667743 233467789999999977 555432211 1 14567778887765
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=3.4e-17 Score=173.76 Aligned_cols=243 Identities=12% Similarity=0.092 Sum_probs=184.5
Q ss_pred CCceEEEEecCCCCC--------------------CcCCcccCC--------CCCCCEEEcCCCcccCCCccccCccccc
Q 046240 76 SHRVTALNISSLNLQ--------------------GEIPHEIGY--------LPSLTKLALGYNSLVGNNSLSGSLPSRI 127 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~--------------------~~~~~~~~~--------l~~L~~L~L~~n~l~~~~~~~~~lp~~~ 127 (763)
..+++.|||++|+|. .+.+..|.+ +++|++|+|.+ .++ .|++.+
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~-------~I~~~a 119 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIK-------NIEDAA 119 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCC-------EECTTT
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-ccc-------chhHHH
Confidence 457999999999888 233456778 99999999998 775 899999
Q ss_pred cccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcc----cccccccccCCCCchh-hhhhhhhccCCcccccCCc
Q 046240 128 DLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNS----FSGFIPNTIGNLRNIE-WLGLVIGLIGNPLNGILPS 202 (763)
Q Consensus 128 ~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~~~~l~~L~-~L~L~~~l~~n~l~~~~p~ 202 (763)
|.++++|++|+|++|.++.+.+..|.++.++..+.+..+. ...+...+|.++.+|+ .+. +... +.++.
T Consensus 120 F~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~----~~~~---~~l~~ 192 (329)
T 3sb4_A 120 FKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQ----VGAM---GKLED 192 (329)
T ss_dssp TTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEE----ECTT---CCHHH
T ss_pred hhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEE----ecCC---CcHHH
Confidence 9999999999999999998999999999988888887743 2334556676777666 222 1111 11122
Q ss_pred ccc----cccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCc
Q 046240 203 SIV----NLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSC 278 (763)
Q Consensus 203 ~~~----~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~ 278 (763)
.++ ... ++..+.+.++-...........+++|+.|+|++|+++.+.+..|.++.+ |+.|+|.+| ++...+.
T Consensus 193 ~~~~~~~~~~-~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~--L~~l~l~~n-i~~I~~~- 267 (329)
T 3sb4_A 193 EIMKAGLQPR-DINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKY--LLKIKLPHN-LKTIGQR- 267 (329)
T ss_dssp HHHHTTCCGG-GCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTT--CCEEECCTT-CCEECTT-
T ss_pred HHhhcccCcc-ccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCC--CCEEECCcc-cceehHH-
Confidence 111 122 6777777766433222222224789999999999999777778998876 999999988 7644444
Q ss_pred cccccCCccc-EEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeC
Q 046240 279 IDIGNLKVVV-EINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDL 340 (763)
Q Consensus 279 ~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 340 (763)
.|.++++|+ .|++.+ +++.+.+.+|.++++|+.|++++|+++...+.+|.++++|+.++.
T Consensus 268 -aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 268 -VFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp -TTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred -HhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 789999999 999998 788788899999999999999999999777889999999999874
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=3.6e-17 Score=159.06 Aligned_cols=130 Identities=27% Similarity=0.355 Sum_probs=96.0
Q ss_pred ceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEE
Q 046240 236 LLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNIS 315 (763)
Q Consensus 236 ~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 315 (763)
+.+++++|+++ .+|..+. ++|++|+|++|+++ .+|. .+.++++|++|+|++|+|++..+..|.++++|+.|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~----~~l~~L~L~~n~i~-~ip~--~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ 84 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP----RDVTELYLDGNQFT-LVPK--ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLI 84 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC----TTCCEEECCSSCCC-SCCG--GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CEEEcCCCCCC-cCCCCCC----CCCCEEECCCCcCc-hhHH--HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEE
Confidence 35566666665 4454433 13777777777776 5665 677777888888888888877777788888888888
Q ss_pred ccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCC
Q 046240 316 LPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEI 373 (763)
Q Consensus 316 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 373 (763)
|++|+|++..|..|..+++|++|+|++|+|+.+.+..|..+++|+.|+|++|++.+..
T Consensus 85 Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 8888888777777888888888888888888777777888888888888888887644
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.68 E-value=5.1e-16 Score=168.40 Aligned_cols=246 Identities=11% Similarity=0.113 Sum_probs=183.6
Q ss_pred CCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCC
Q 046240 99 YLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGN 178 (763)
Q Consensus 99 ~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 178 (763)
....++.+.+..+ ++ .|+...|.+. +|+.++|..| ++.+...+|.+. +|+.+.|.+ .++.+.+.+|.+
T Consensus 111 ~~~~l~~i~ip~~-i~-------~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~ 178 (401)
T 4fdw_A 111 ILKGYNEIILPNS-VK-------SIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYY 178 (401)
T ss_dssp ECSSCSEEECCTT-CC-------EECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTT
T ss_pred ecCCccEEEECCc-cC-------EehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhC
Confidence 3466777777643 32 6777777664 6888888766 676777777774 688888875 677677788888
Q ss_pred CCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCC
Q 046240 179 LRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQN 258 (763)
Q Consensus 179 l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 258 (763)
+++|+.++ +.+|+++......|. .. +|+++.|.++ ++.+...+|.++++|+.+++..| ++.+....|.+ .+
T Consensus 179 c~~L~~l~----l~~n~l~~I~~~aF~-~~-~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~ 249 (401)
T 4fdw_A 179 CYNLKKAD----LSKTKITKLPASTFV-YA-GIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SG 249 (401)
T ss_dssp CTTCCEEE----CTTSCCSEECTTTTT-TC-CCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CC
T ss_pred cccCCeee----cCCCcceEechhhEe-ec-ccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CC
Confidence 88888887 667777755444444 44 8888888744 77677888888888999988875 55566667776 33
Q ss_pred CCccEEEecCCccccCCCCccccccCCcccEEEccccccc-----ccCCcccCCCcCccEEEccCccccCcccccccccc
Q 046240 259 SKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFS-----GDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLT 333 (763)
Q Consensus 259 ~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 333 (763)
|+.+.+. |.++...+. .|.++++|+.+++.+|.+. .+.+.+|.++++|+.+.|. |.++.....+|.+++
T Consensus 250 --L~~i~lp-~~i~~I~~~--aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~ 323 (401)
T 4fdw_A 250 --ITTVKLP-NGVTNIASR--AFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNR 323 (401)
T ss_dssp --CSEEEEE-TTCCEECTT--TTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCC
T ss_pred --ccEEEeC-CCccEEChh--HhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCC
Confidence 8888884 456534344 7888888999998888765 4667888889999999998 457766677888889
Q ss_pred cccEEeCcCCccCCccchhhhhhccCceEEcccccCCCCC
Q 046240 334 SLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLEGEI 373 (763)
Q Consensus 334 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 373 (763)
+|+.++|.+| ++.+...+|.++ +|+.+++++|.+....
T Consensus 324 ~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~ 361 (401)
T 4fdw_A 324 KVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVF 361 (401)
T ss_dssp SCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCC
T ss_pred CccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccc
Confidence 9999998555 777778888888 8999999988776543
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.6e-16 Score=150.83 Aligned_cols=134 Identities=20% Similarity=0.239 Sum_probs=84.7
Q ss_pred cccEEEeecCccc-cccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCccc
Q 046240 210 SLERLYISNCSIT-GNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVV 288 (763)
Q Consensus 210 ~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~ 288 (763)
+|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. . .+..+++|+
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~----------------------------~~~~l~~L~ 74 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--S----------------------------NLPKLPKLK 74 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--S----------------------------SCCCCSSCC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--h----------------------------hhccCCCCC
Confidence 5555666655555 44454455555555555555555422 2 455566666
Q ss_pred EEEcccccccccCCcccCCCcCccEEEccCccccCccc-ccccccccccEEeCcCCccCCccc---hhhhhhccCceEEc
Q 046240 289 EINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIP-ESFGYLTSLEILDLSNNKISGFIL---ISLEKLLYLKKLNL 364 (763)
Q Consensus 289 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l 364 (763)
+|+|++|++++.+|..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|++++..+ ..+..+++|+.|++
T Consensus 75 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 154 (168)
T 2ell_A 75 KLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDG 154 (168)
T ss_dssp EEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETT
T ss_pred EEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecC
Confidence 66666666665566666667777777777777764322 567777777777777777777555 46777778888888
Q ss_pred ccccCCCCC
Q 046240 365 SFNKLEGEI 373 (763)
Q Consensus 365 ~~N~l~~~~ 373 (763)
++|.+...+
T Consensus 155 ~~n~~~~~~ 163 (168)
T 2ell_A 155 YDREDQEAP 163 (168)
T ss_dssp EETTSCBCC
T ss_pred CCCChhhcc
Confidence 887776443
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.1e-16 Score=150.12 Aligned_cols=134 Identities=18% Similarity=0.184 Sum_probs=103.5
Q ss_pred CCchhhhhhhhhccCCccc-ccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccC
Q 046240 179 LRNIEWLGLVIGLIGNPLN-GILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQ 257 (763)
Q Consensus 179 l~~L~~L~L~~~l~~n~l~-~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 257 (763)
.++|+.|+ +++|.++ +.+|..+..+. +|++|+|++|+|++. ..|..+++|++|+|++|++++.+|..+..++
T Consensus 23 ~~~L~~L~----l~~n~l~~~~i~~~~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 95 (168)
T 2ell_A 23 PAAVRELV----LDNCKSNDGKIEGLTAEFV-NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLP 95 (168)
T ss_dssp TTSCSEEE----CCSCBCBTTBCSSCCGGGG-GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCT
T ss_pred cccCCEEE----CCCCCCChhhHHHHHHhCC-CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCC
Confidence 36788888 8899998 78898888888 999999999999976 7899999999999999999977777777776
Q ss_pred CCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCC---cccCCCcCccEEEccCcccc
Q 046240 258 NSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIP---ATIGGLKDVQNISLPYNRLE 322 (763)
Q Consensus 258 ~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 322 (763)
+ |++|+|++|++++ +|....+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 96 ~--L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 96 N--LTHLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp T--CCEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred C--CCEEeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5 8888888888874 3311156667777777777777765444 35666666666666666665
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=5.2e-16 Score=148.76 Aligned_cols=112 Identities=21% Similarity=0.230 Sum_probs=70.9
Q ss_pred ccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeC
Q 046240 261 LDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDL 340 (763)
Q Consensus 261 L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 340 (763)
|++|++++|++++..+. .+..+++|++|+|++|++++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|
T Consensus 30 l~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 30 ATRLELESNKLQSLPHG--VFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp CSEEECCSSCCCCCCTT--TTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcEEEeCCCcccEeCHH--HhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 55566666665543333 4555666666666666666555555666666666666666666555555666666777777
Q ss_pred cCCccCCccchhhhhhccCceEEcccccCCCCCC
Q 046240 341 SNNKISGFILISLEKLLYLKKLNLSFNKLEGEIP 374 (763)
Q Consensus 341 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 374 (763)
++|+++++++..+..+++|+.|++++|++++.+|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7777666655556666677777777777666554
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=4.7e-16 Score=151.15 Aligned_cols=127 Identities=24% Similarity=0.281 Sum_probs=83.8
Q ss_pred EEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCC
Q 046240 80 TALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLT 159 (763)
Q Consensus 80 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~ 159 (763)
+.+++++|+|+ .+|..+. ++|++|+|++|.|+ .+| ..+.++++|++|+|++|.|+++.+..|.++++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-------~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~ 81 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-------LVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLL 81 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-------SCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-------hhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCC
Confidence 35778888888 5665543 57777888777774 566 3445677777777777777766666777777777
Q ss_pred eeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceee
Q 046240 160 ILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLD 239 (763)
Q Consensus 160 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 239 (763)
+|+|++|+|+++.|..|.+++ +|++|+|++|+|+...+..|..+++|+.|+
T Consensus 82 ~L~Ls~N~l~~i~~~~f~~l~-----------------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (193)
T 2wfh_A 82 TLILSYNRLRCIPPRTFDGLK-----------------------------SLRLLSLHGNDISVVPEGAFNDLSALSHLA 132 (193)
T ss_dssp EEECCSSCCCBCCTTTTTTCT-----------------------------TCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred EEECCCCccCEeCHHHhCCCC-----------------------------CCCEEECCCCCCCeeChhhhhcCccccEEE
Confidence 777777777766666665555 455555666666655555566666666666
Q ss_pred ccccccc
Q 046240 240 LELNKLT 246 (763)
Q Consensus 240 L~~N~l~ 246 (763)
|++|.+.
T Consensus 133 L~~N~~~ 139 (193)
T 2wfh_A 133 IGANPLY 139 (193)
T ss_dssp CCSSCEE
T ss_pred eCCCCee
Confidence 6666655
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=3.4e-16 Score=145.39 Aligned_cols=128 Identities=20% Similarity=0.205 Sum_probs=85.2
Q ss_pred cccceeeccccccc-CCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCc
Q 046240 233 SIFLLLDLELNKLT-GPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDV 311 (763)
Q Consensus 233 ~~L~~L~L~~N~l~-~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 311 (763)
++|+.|++++|.++ +.+|..+..+++ |++|++++|.+++. . .+..+++|++|+|++|++++.+|..+..+++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~--L~~L~l~~n~l~~~--~--~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 90 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEE--LEFLSTINVGLTSI--A--NLPKLNKLKKLELSDNRVSGGLEVLAEKCPNL 90 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTT--CCEEECTTSCCCCC--T--TCCCCTTCCEEECCSSCCCSCTHHHHHHCTTC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCC--CcEEECcCCCCCCc--h--hhhcCCCCCEEECCCCcccchHHHHhhhCCCC
Confidence 34444444444444 344444444433 55555555555533 2 46667777777777777776677777777888
Q ss_pred cEEEccCccccCc-ccccccccccccEEeCcCCccCCccc---hhhhhhccCceEEccc
Q 046240 312 QNISLPYNRLEGP-IPESFGYLTSLEILDLSNNKISGFIL---ISLEKLLYLKKLNLSF 366 (763)
Q Consensus 312 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~ 366 (763)
+.|++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 91 ~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 91 THLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888888888753 34678888888888888888887665 5788888888888763
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=3.6e-15 Score=161.75 Aligned_cols=264 Identities=12% Similarity=0.117 Sum_probs=215.0
Q ss_pred ceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCC
Q 046240 78 RVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASK 157 (763)
Q Consensus 78 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~ 157 (763)
.++.+.+.+ +++.+-..+|.+. +|+.++|..| ++ .|+...|.+ .+|+.++|.. .++.+.+..|.++++
T Consensus 114 ~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~-------~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~ 181 (401)
T 4fdw_A 114 GYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LK-------SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYN 181 (401)
T ss_dssp SCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CC-------EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTT
T ss_pred CccEEEECC-ccCEehHhhcccC-CccEEEeCCC-cc-------EECHHhcCC-CCceEEEeCC-CccEehHHHhhCccc
Confidence 344555544 4665666788885 7999999876 54 788888877 4799999986 778788889999999
Q ss_pred CCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccce
Q 046240 158 LTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLL 237 (763)
Q Consensus 158 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 237 (763)
|+.++|++|+++.+...+|. .++|+.+. +. +++..+-...|.++. +|+.+++.+| ++.+...+|.+ .+|+.
T Consensus 182 L~~l~l~~n~l~~I~~~aF~-~~~L~~l~----lp-~~l~~I~~~aF~~~~-~L~~l~l~~~-l~~I~~~aF~~-~~L~~ 252 (401)
T 4fdw_A 182 LKKADLSKTKITKLPASTFV-YAGIEEVL----LP-VTLKEIGSQAFLKTS-QLKTIEIPEN-VSTIGQEAFRE-SGITT 252 (401)
T ss_dssp CCEEECTTSCCSEECTTTTT-TCCCSEEE----CC-TTCCEECTTTTTTCT-TCCCEECCTT-CCEECTTTTTT-CCCSE
T ss_pred CCeeecCCCcceEechhhEe-ecccCEEE----eC-CchheehhhHhhCCC-CCCEEecCCC-ccCcccccccc-CCccE
Confidence 99999999999988888887 58898888 54 447767777788887 9999999875 67677888888 89999
Q ss_pred eecccccccCCCCccccccCCCCccEEEecCCccc-----cCCCCccccccCCcccEEEcccccccccCCcccCCCcCcc
Q 046240 238 LDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFS-----GSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQ 312 (763)
Q Consensus 238 L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~-----~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 312 (763)
+.| .|.++...+..|.++.+ |+.+++.+|.+. ...+. .|.++++|+.++|. |.++.+...+|.++++|+
T Consensus 253 i~l-p~~i~~I~~~aF~~c~~--L~~l~l~~~~~~~~~~~~I~~~--aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 253 VKL-PNGVTNIASRAFYYCPE--LAEVTTYGSTFNDDPEAMIHPY--CLEGCPKLARFEIP-ESIRILGQGLLGGNRKVT 326 (401)
T ss_dssp EEE-ETTCCEECTTTTTTCTT--CCEEEEESSCCCCCTTCEECTT--TTTTCTTCCEECCC-TTCCEECTTTTTTCCSCC
T ss_pred EEe-CCCccEEChhHhhCCCC--CCEEEeCCccccCCcccEECHH--HhhCCccCCeEEeC-CceEEEhhhhhcCCCCcc
Confidence 999 56677677888999977 999999988775 23333 78999999999999 568878889999999999
Q ss_pred EEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhc-cCceEEcccccCC
Q 046240 313 NISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLL-YLKKLNLSFNKLE 370 (763)
Q Consensus 313 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~ 370 (763)
.+.|..| ++...+.+|.++ +|+.+++++|.+..+.+..|.+++ .++.|++..|.+.
T Consensus 327 ~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 327 QLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 9999665 776777899999 999999999999988888888884 7889998877654
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.1e-15 Score=146.43 Aligned_cols=130 Identities=24% Similarity=0.275 Sum_probs=83.6
Q ss_pred EEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCe
Q 046240 81 ALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTI 160 (763)
Q Consensus 81 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~ 160 (763)
.+++++++++ .+|..+ .++|++|+|++|+++ .+|...+..+++|++|+|++|+|++..+..|.++++|++
T Consensus 11 ~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~-------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (177)
T 2o6r_A 11 EIRCNSKGLT-SVPTGI--PSSATRLELESNKLQ-------SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTI 80 (177)
T ss_dssp EEECCSSCCS-SCCTTC--CTTCSEEECCSSCCC-------CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred EEEecCCCCc-cCCCCC--CCCCcEEEeCCCccc-------EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCE
Confidence 3444556676 455433 367778888877774 566666667777777777777777666666677777777
Q ss_pred eeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeec
Q 046240 161 LELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDL 240 (763)
Q Consensus 161 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 240 (763)
|+|++|+|++..+..|.+++ +|++|+|++|+|++..+..|..+++|++|+|
T Consensus 81 L~l~~N~l~~~~~~~~~~l~-----------------------------~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 131 (177)
T 2o6r_A 81 LYLHENKLQSLPNGVFDKLT-----------------------------QLKELALDTNQLKSVPDGIFDRLTSLQKIWL 131 (177)
T ss_dssp EECCSSCCCCCCTTTTTTCT-----------------------------TCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred EECCCCCccccCHHHhhCCc-----------------------------ccCEEECcCCcceEeCHHHhcCCcccCEEEe
Confidence 77777777765555555544 5556666666666555555566666666666
Q ss_pred ccccccCCC
Q 046240 241 ELNKLTGPI 249 (763)
Q Consensus 241 ~~N~l~~~~ 249 (763)
++|.+++..
T Consensus 132 ~~N~~~~~~ 140 (177)
T 2o6r_A 132 HTNPWDCSC 140 (177)
T ss_dssp CSSCBCCCH
T ss_pred cCCCeeccC
Confidence 666666433
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.7e-16 Score=145.14 Aligned_cols=127 Identities=19% Similarity=0.237 Sum_probs=111.6
Q ss_pred cccEEEeecCccc-cccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCccc
Q 046240 210 SLERLYISNCSIT-GNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVV 288 (763)
Q Consensus 210 ~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~ 288 (763)
+|++|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++ |++|++++|++++.+|. .+..+++|+
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~--L~~L~Ls~n~i~~~~~~--~~~~l~~L~ 91 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNK--LKKLELSDNRVSGGLEV--LAEKCPNLT 91 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTT--CCEEECCSSCCCSCTHH--HHHHCTTCC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCC--CCEEECCCCcccchHHH--HhhhCCCCC
Confidence 8999999999998 78888899999999999999999965 77888876 99999999999976777 677799999
Q ss_pred EEEccccccccc-CCcccCCCcCccEEEccCccccCccc---ccccccccccEEeCcC
Q 046240 289 EINLSRNNFSGD-IPATIGGLKDVQNISLPYNRLEGPIP---ESFGYLTSLEILDLSN 342 (763)
Q Consensus 289 ~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~ 342 (763)
+|++++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999999964 34889999999999999999997665 5789999999999874
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=4.5e-16 Score=164.76 Aligned_cols=137 Identities=13% Similarity=0.150 Sum_probs=98.8
Q ss_pred cCcCceecccCCceEEEEEecCCceEEEEEeehhhH------------------H----HHHHHHHHHHHHHhCCCCccc
Q 046240 477 FGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECA------------------R----AMKSFEVECEVMKNIRHRNLV 534 (763)
Q Consensus 477 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~------------------~----~~~~~~~e~~~l~~l~h~niv 534 (763)
|.+.+.||+|++|.||+|...+|+.||||+++.... . ......+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 888999999999999999999999999998752210 0 011123466666666444332
Q ss_pred eEEeeeecCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCC--
Q 046240 535 KIISGCSNDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDM-- 612 (763)
Q Consensus 535 ~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~-- 612 (763)
...-+.. ...++||||++|++|..+.... ....++.|++.++.+| |+.+||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~~-------~~~~l~~qll~~l~~l---H~~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSVP-------DPASLYADLIALILRL---AKHGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCCS-------CHHHHHHHHHHHHHHH---HHTTEECSCCSTTSEEEEEEECS
T ss_pred CCeeeec--cCceEEEEecCCccHhhhcccH-------HHHHHHHHHHHHHHHH---HHCCCcCCCCCHHHEEEeCCCCc
Confidence 1111111 1237999999999887664321 2356789999999999 678999999999999998776
Q ss_pred --------cEEEeeecCceec
Q 046240 613 --------IAHLSDFGIAKLL 625 (763)
Q Consensus 613 --------~~kl~Dfgla~~~ 625 (763)
.+.|+||+-+...
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEET
T ss_pred ccccccccceEEEEeCCcccC
Confidence 3899999977654
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=5.3e-15 Score=141.51 Aligned_cols=134 Identities=19% Similarity=0.167 Sum_probs=92.8
Q ss_pred cCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCC
Q 046240 229 MGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGL 308 (763)
Q Consensus 229 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 308 (763)
+..+++|+.|++++|+++. +|. +..+. ++|++|+|++|.+++. . .+..+++|++|+|++|+|++..+..|..+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~-~~L~~L~Ls~N~l~~~--~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 87 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATL-DQFDAIDFSDNEIRKL--D--GFPLLRRLKTLLVNNNRICRIGEGLDQAL 87 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGT-TCCSEEECCSSCCCEE--C--CCCCCSSCCEEECCSSCCCEECSCHHHHC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcC-CCCCEEECCCCCCCcc--c--ccccCCCCCEEECCCCcccccCcchhhcC
Confidence 4455566666666666663 333 33332 1277777777777643 2 46777788888888888886555556788
Q ss_pred cCccEEEccCccccCcccc--cccccccccEEeCcCCccCCccch---hhhhhccCceEEcccccCC
Q 046240 309 KDVQNISLPYNRLEGPIPE--SFGYLTSLEILDLSNNKISGFILI---SLEKLLYLKKLNLSFNKLE 370 (763)
Q Consensus 309 ~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~l~~N~l~ 370 (763)
++|+.|+|++|+++ .+|. .+..+++|+.|++++|+++...+. .+..+++|+.||+++|.+.
T Consensus 88 ~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 88 PDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888888888886 4554 677888888888888888764333 4788888888888888765
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=8e-17 Score=157.50 Aligned_cols=151 Identities=22% Similarity=0.234 Sum_probs=111.8
Q ss_pred cccEEEeecCcccccccc------ccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCcccccc
Q 046240 210 SLERLYISNCSITGNIPQ------VMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGN 283 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~ 283 (763)
+++.++++.|.+.+..|. .|..+++|++|+|++|++++ +| .+.++++ |++|++++|.++ .+|. .+..
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~--L~~L~l~~n~l~-~l~~--~~~~ 91 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMEN--LRILSLGRNLIK-KIEN--LDAV 91 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTT--CCEEEEEEEEEC-SCSS--HHHH
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCC--CCEEECCCCCcc-cccc--hhhc
Confidence 555566666666655555 77778888888888888875 56 7777765 888888888887 5666 5666
Q ss_pred CCcccEEEcccccccccCCcccCCCcCccEEEccCccccCccc-ccccccccccEEeCcCCccCCccch----------h
Q 046240 284 LKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIP-ESFGYLTSLEILDLSNNKISGFILI----------S 352 (763)
Q Consensus 284 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~----------~ 352 (763)
+++|++|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|++++..|. .
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 7888888888888885 34 57788888888888888885433 4678888888888888888776554 3
Q ss_pred hhhhccCceEEcccccCCC
Q 046240 353 LEKLLYLKKLNLSFNKLEG 371 (763)
Q Consensus 353 ~~~l~~L~~L~l~~N~l~~ 371 (763)
+..+++|+.|| +|+++.
T Consensus 170 ~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHCSSCSEEC--CGGGTT
T ss_pred HHhCCCcEEEC--CcccCH
Confidence 77888888876 666663
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=3.6e-15 Score=142.69 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=17.6
Q ss_pred CccEEEcccccccccCCCcccCCCCCCeeeecCcccccc
Q 046240 133 NVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGF 171 (763)
Q Consensus 133 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 171 (763)
+|++|+|++|.|++. ..|.++++|++|+|++|+|+++
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~ 79 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRI 79 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCccccc
Confidence 444444444444433 3444444555555555554433
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=2.6e-14 Score=135.74 Aligned_cols=108 Identities=22% Similarity=0.276 Sum_probs=63.0
Q ss_pred cEEEecCCccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCc
Q 046240 262 DTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLS 341 (763)
Q Consensus 262 ~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 341 (763)
+.+++++|+++ .+|. .+ .++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 12 ~~l~~s~n~l~-~ip~--~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPT--GI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TEEECTTSCCS-SCCS--CC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCc--cC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 44555555555 3443 22 2455566666666665555566666666666666666665555555666666666666
Q ss_pred CCccCCccchhhhhhccCceEEcccccCCCCCC
Q 046240 342 NNKISGFILISLEKLLYLKKLNLSFNKLEGEIP 374 (763)
Q Consensus 342 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 374 (763)
+|+|+++.+..|..+++|+.|+|++|++++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 666666555556666666666666666665544
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=2e-16 Score=154.68 Aligned_cols=162 Identities=19% Similarity=0.237 Sum_probs=120.6
Q ss_pred ccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCC
Q 046240 152 ITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGN 231 (763)
Q Consensus 152 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~ 231 (763)
+.....++.+++++|.+++..|. + + .+|..+..+. +|++|+|++|++++ +| .+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~-l---~------------------~l~~~~~~l~-~L~~L~ls~n~l~~-l~-~~~~ 68 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPP-I---E------------------KMDATLSTLK-ACKHLALSTNNIEK-IS-SLSG 68 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTT-C---C------------------CCHHHHHHTT-TCSEEECSEEEESC-CC-CHHH
T ss_pred HHhcccccCcchheeEeccccCc-H---h------------------hhhHHHhcCC-CCCEEECCCCCCcc-cc-cccc
Confidence 44556777777777777765443 1 1 1222455555 78888888888885 55 7888
Q ss_pred ccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCC-cccCCCcC
Q 046240 232 LSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIP-ATIGGLKD 310 (763)
Q Consensus 232 l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~ 310 (763)
+++|++|+|++|+++ .+|..+..+++ |++|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++
T Consensus 69 l~~L~~L~l~~n~l~-~l~~~~~~~~~--L~~L~L~~N~l~~-l~---~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~ 141 (198)
T 1ds9_A 69 MENLRILSLGRNLIK-KIENLDAVADT--LEELWISYNQIAS-LS---GIEKLVNLRVLYMSNNKITNWGEIDKLAALDK 141 (198)
T ss_dssp HTTCCEEEEEEEEEC-SCSSHHHHHHH--CSEEEEEEEECCC-HH---HHHHHHHSSEEEESEEECCCHHHHHHHTTTTT
T ss_pred CCCCCEEECCCCCcc-cccchhhcCCc--CCEEECcCCcCCc-CC---ccccCCCCCEEECCCCcCCchhHHHHHhcCCC
Confidence 888888888888888 56777766665 8888888888884 44 47788889999999999885433 57888999
Q ss_pred ccEEEccCccccCccccc----------ccccccccEEeCcCCccCC
Q 046240 311 VQNISLPYNRLEGPIPES----------FGYLTSLEILDLSNNKISG 347 (763)
Q Consensus 311 L~~L~Ls~N~l~~~~p~~----------~~~l~~L~~L~L~~N~l~~ 347 (763)
|+.|++++|.+++..|.. +..+++|+.|| +|.++.
T Consensus 142 L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 142 LEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp CSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 999999999998776653 78899999987 777765
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=5.9e-14 Score=133.71 Aligned_cols=89 Identities=22% Similarity=0.249 Sum_probs=48.3
Q ss_pred CcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEc
Q 046240 285 KVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNL 364 (763)
Q Consensus 285 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 364 (763)
++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|+++++..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 44555555555555554555555555555555555555444444555555555555555555544444555555555555
Q ss_pred ccccCCCCC
Q 046240 365 SFNKLEGEI 373 (763)
Q Consensus 365 ~~N~l~~~~ 373 (763)
++|+|.+.+
T Consensus 113 ~~N~~~c~~ 121 (174)
T 2r9u_A 113 YNNPWDCEC 121 (174)
T ss_dssp CSSCBCTTB
T ss_pred CCCCccccc
Confidence 555555443
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.2e-13 Score=131.01 Aligned_cols=48 Identities=19% Similarity=0.229 Sum_probs=25.3
Q ss_pred CccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCC
Q 046240 133 NVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLR 180 (763)
Q Consensus 133 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 180 (763)
+|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|.+++
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~ 78 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCC
Confidence 344555555555555555555555555555555555554444444444
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.9e-13 Score=130.17 Aligned_cols=48 Identities=15% Similarity=0.176 Sum_probs=23.6
Q ss_pred CccEEEcccccccccCCCcccCCCCCCeeeecCcccccccccccCCCC
Q 046240 133 NVKALSLAYNRFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLR 180 (763)
Q Consensus 133 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 180 (763)
+|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.+++
T Consensus 34 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 81 (174)
T 2r9u_A 34 DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLT 81 (174)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcc
Confidence 344444444444444455555555555555555555544443344333
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.43 E-value=1.9e-12 Score=140.68 Aligned_cols=264 Identities=14% Similarity=0.083 Sum_probs=157.1
Q ss_pred CCceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccc-------------
Q 046240 76 SHRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYN------------- 142 (763)
Q Consensus 76 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N------------- 142 (763)
-.+++.+.|.. +++.+-..+|.++++|+.++|..+ ++ .|+...|.++++|+.+.+..+
T Consensus 70 c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~-------~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 70 CRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK-------MIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCD 140 (394)
T ss_dssp CTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC-------EECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCC
T ss_pred CCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce-------EccchhhcccccchhhcccCceeeecceeeeccc
Confidence 35788898874 477666778999999999998755 32 344444444444444333222
Q ss_pred --------cccccCCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCC-------------
Q 046240 143 --------RFSGTIQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILP------------- 201 (763)
Q Consensus 143 --------~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p------------- 201 (763)
.+..+...+|.++++|+.+.+.++. ..+...+|.++++|+.+.+ ..| ++..-.
T Consensus 141 ~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l----~~~-~~~I~~~~F~~~~~L~~i~ 214 (394)
T 4fs7_A 141 FKEITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKL----PRN-LKIIRDYCFAECILLENME 214 (394)
T ss_dssp CSEEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCC----CTT-CCEECTTTTTTCTTCCBCC
T ss_pred ccccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEc----CCC-ceEeCchhhccccccceee
Confidence 0111122334444444444444332 2233444444444444442 111 221112
Q ss_pred ---------cccccccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccc
Q 046240 202 ---------SSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFS 272 (763)
Q Consensus 202 ---------~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~ 272 (763)
...+... +|+.+.+.++ ++......|..+..|+.+.+..+..+ .....|..... ++.+....+.+.
T Consensus 215 ~~~~~~~i~~~~~~~~-~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~--l~~~~~~~~~i~ 289 (394)
T 4fs7_A 215 FPNSLYYLGDFALSKT-GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSG--LKKVIYGSVIVP 289 (394)
T ss_dssp CCTTCCEECTTTTTTC-CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTT--CCEEEECSSEEC
T ss_pred cCCCceEeehhhcccC-CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccc--cceeccCceeec
Confidence 2222222 5555555433 33345556677777777777766554 55556666654 666666655432
Q ss_pred cCCCCccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchh
Q 046240 273 GSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILIS 352 (763)
Q Consensus 273 ~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 352 (763)
.. .|..+.+|+.+.+.++ ++.+...+|.++++|+.+++..+ ++.....+|.++++|+.++|..| ++.+...+
T Consensus 290 ----~~-~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~a 361 (394)
T 4fs7_A 290 ----EK-TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANA 361 (394)
T ss_dssp ----TT-TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ----cc-cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHH
Confidence 21 5677788888888654 66666778888888888888654 66556678888888888888776 77777788
Q ss_pred hhhhccCceEEcccc
Q 046240 353 LEKLLYLKKLNLSFN 367 (763)
Q Consensus 353 ~~~l~~L~~L~l~~N 367 (763)
|.++.+|+.+++..|
T Consensus 362 F~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 362 FQGCINLKKVELPKR 376 (394)
T ss_dssp BTTCTTCCEEEEEGG
T ss_pred hhCCCCCCEEEECCC
Confidence 888888888888654
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=2.5e-14 Score=153.62 Aligned_cols=93 Identities=19% Similarity=0.296 Sum_probs=49.9
Q ss_pred ccEEEecCCccccC----CCCccccccCCcccEEEccccccccc----CCcccCCCcCccEEEccCccccCc----cccc
Q 046240 261 LDTLSLCGNSFSGS----IPSCIDIGNLKVVVEINLSRNNFSGD----IPATIGGLKDVQNISLPYNRLEGP----IPES 328 (763)
Q Consensus 261 L~~L~L~~N~l~~~----~p~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 328 (763)
|++|+|++|.++.. ++. .+...++|++|+|++|+|+.. ++..+...++|+.|+|++|.|+.. +...
T Consensus 157 L~~L~Ls~n~l~~~~~~~l~~--~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 157 ITTLRLSNNPLTAAGVAVLME--GLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCEEECCSSCCHHHHHHHHHH--HHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred cceeeCCCCCCChHHHHHHHH--HHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 55555555555421 111 234455566666666666532 234455556666666666666542 2233
Q ss_pred ccccccccEEeCcCCccCCccchhhhh
Q 046240 329 FGYLTSLEILDLSNNKISGFILISLEK 355 (763)
Q Consensus 329 ~~~l~~L~~L~L~~N~l~~~~~~~~~~ 355 (763)
+...++|++|+|++|.|+......+..
T Consensus 235 L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 235 AREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 344566777777777766554444444
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=1.5e-12 Score=139.01 Aligned_cols=133 Identities=16% Similarity=0.081 Sum_probs=93.6
Q ss_pred ceeecccc-cccCCCCccccccCCCCccEEEecC-CccccCCCCccccccCCcccEEEcccccccccCCcccCCCcCccE
Q 046240 236 LLLDLELN-KLTGPIPVTFGRLQNSKLDTLSLCG-NSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQN 313 (763)
Q Consensus 236 ~~L~L~~N-~l~~~~p~~~~~l~~~~L~~L~L~~-N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 313 (763)
..++++++ +|+ .+|. +..+.+ |+.|+|++ |+|++..|. .|.++++|+.|+|++|+|++..|..|.++++|+.
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~--L~~L~l~~~n~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 84 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAEN--LTELYIENQQHLQHLELR--DLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSC--CSEEECCSCSSCCEECGG--GSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCC--eeEEEccCCCCCCCcChh--HhccccCCCEEECCCCccceeCHHHhcCCcCCCE
Confidence 35678887 788 4676 777765 88888885 888866656 6788888888888888888877888888888888
Q ss_pred EEccCccccCcccccccccccccEEeCcCCccCCccc-hhhhhhccCceEEcccccCCCCCCC
Q 046240 314 ISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFIL-ISLEKLLYLKKLNLSFNKLEGEIPR 375 (763)
Q Consensus 314 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~ 375 (763)
|+|++|+|++..+..|..++ |+.|+|++|++...-. ..|..+.......+..+.+++..|.
T Consensus 85 L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 85 LNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp EECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred EeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 88888888866666666665 8888888888775322 3344443344444555666655554
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=5.9e-12 Score=134.34 Aligned_cols=90 Identities=21% Similarity=0.299 Sum_probs=42.9
Q ss_pred cccCCcccEEEccc-ccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccC
Q 046240 281 IGNLKVVVEINLSR-NNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYL 359 (763)
Q Consensus 281 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 359 (763)
+..+++|++|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+++++..|..++ |
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L 105 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-L 105 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-C
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-c
Confidence 34444444555543 444444444444455555555555555444444444455555555555555444444443333 4
Q ss_pred ceEEcccccCCC
Q 046240 360 KKLNLSFNKLEG 371 (763)
Q Consensus 360 ~~L~l~~N~l~~ 371 (763)
+.|+|++|+|.+
T Consensus 106 ~~l~l~~N~~~c 117 (347)
T 2ifg_A 106 QELVLSGNPLHC 117 (347)
T ss_dssp CEEECCSSCCCC
T ss_pred eEEEeeCCCccC
Confidence 455555554444
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=1.4e-13 Score=147.78 Aligned_cols=158 Identities=19% Similarity=0.177 Sum_probs=121.3
Q ss_pred cccEEEeecCccccccccccCCc-----cccceeecccccccCCCCcccc-ccCCCCccEEEecCCccccCCCCcccc--
Q 046240 210 SLERLYISNCSITGNIPQVMGNL-----SIFLLLDLELNKLTGPIPVTFG-RLQNSKLDTLSLCGNSFSGSIPSCIDI-- 281 (763)
Q Consensus 210 ~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~-~l~~~~L~~L~L~~N~l~~~~p~~~~~-- 281 (763)
+|++|+|++|.|+......+... ++|++|+|++|.|+......+. .+.+ |+.|+|++|.++..... .+
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~--L~~L~Ls~n~l~~~~~~--~L~~ 148 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLR--ARKLGLQLNSLGPEACK--DLRD 148 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHT--EEEEECCSSCCCHHHHH--HHHH
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHh--ccHhhcCCCCCCHHHHH--HHHH
Confidence 78999999999986555554443 7999999999999754333332 3444 99999999999743222 22
Q ss_pred ---ccCCcccEEEccccccccc----CCcccCCCcCccEEEccCccccCc----ccccccccccccEEeCcCCccCCcc-
Q 046240 282 ---GNLKVVVEINLSRNNFSGD----IPATIGGLKDVQNISLPYNRLEGP----IPESFGYLTSLEILDLSNNKISGFI- 349 (763)
Q Consensus 282 ---~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~- 349 (763)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|+|+.. ++..+...++|++|+|++|.|+...
T Consensus 149 ~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~ 228 (372)
T 3un9_A 149 LLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAA 228 (372)
T ss_dssp HHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHH
T ss_pred HHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHH
Confidence 2457899999999999753 445567889999999999999854 3556777889999999999998753
Q ss_pred ---chhhhhhccCceEEcccccCCC
Q 046240 350 ---LISLEKLLYLKKLNLSFNKLEG 371 (763)
Q Consensus 350 ---~~~~~~l~~L~~L~l~~N~l~~ 371 (763)
...+...++|++|+|++|+|+.
T Consensus 229 ~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 229 LALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHHHhCCCCCEEeccCCCCCH
Confidence 3445566899999999999874
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.26 E-value=1e-10 Score=126.92 Aligned_cols=265 Identities=9% Similarity=0.103 Sum_probs=152.3
Q ss_pred ceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCc---ccCCCccccCccccccccCCCccEEEcccccccccCCCcccC
Q 046240 78 RVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNS---LVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITN 154 (763)
Q Consensus 78 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~---l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~ 154 (763)
.++.+.+..+ ++.+-..+|.++++|+.+.+..|. ++ .|+...|.+..+|+.+.+..+ ++.+....|.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-------~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVK-------KIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCC-------EECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeee-------EechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 3666777643 665566678888888888877653 32 667777777777777777654 45466667777
Q ss_pred CCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccc
Q 046240 155 ASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSI 234 (763)
Q Consensus 155 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~ 234 (763)
+.+|+.+.+..+ +..+...+|.++.+|+.+. +.. .++.+-...| ... +|+.+.+..+-.. ....+|..+.+
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~----~~~-~~~~I~~~aF-~~~-~l~~i~ip~~~~~-i~~~af~~c~~ 206 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVT----LPD-SVTAIEERAF-TGT-ALTQIHIPAKVTR-IGTNAFSECFA 206 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEE----CCT-TCCEECTTTT-TTC-CCSEEEECTTCCE-ECTTTTTTCTT
T ss_pred hcccccccccce-eeeecccceeccccccccc----ccc-eeeEeccccc-ccc-ceeEEEECCcccc-cccchhhhccc
Confidence 788888887644 3446667777777777766 322 2333333333 333 6777777655433 55666777766
Q ss_pred cceeeccccccc------------------------------------CCCCccccccCCCCccEEEecCCccccCCCCc
Q 046240 235 FLLLDLELNKLT------------------------------------GPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSC 278 (763)
Q Consensus 235 L~~L~L~~N~l~------------------------------------~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~ 278 (763)
|.......+... ......|.+... |+.+.+.++... ....
T Consensus 207 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~--L~~i~lp~~~~~-I~~~- 282 (394)
T 4gt6_A 207 LSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAY--LASVKMPDSVVS-IGTG- 282 (394)
T ss_dssp CCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSS--CCEEECCTTCCE-ECTT-
T ss_pred cceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeeccc--ccEEecccccce-ecCc-
Confidence 666655443322 111223333333 555555443322 2222
Q ss_pred cccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhcc
Q 046240 279 IDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLY 358 (763)
Q Consensus 279 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 358 (763)
.|.+++.|+.+.+. +.++.+...+|.++.+|+.+.+..+ ++.....+|.++++|+.+.|..+ ++.+...+|.++++
T Consensus 283 -aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~ 358 (394)
T 4gt6_A 283 -AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTA 358 (394)
T ss_dssp -TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTT
T ss_pred -ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCC
Confidence 45555556666554 3444445555666666666666543 44344455666666666666433 55555566666666
Q ss_pred CceEEccccc
Q 046240 359 LKKLNLSFNK 368 (763)
Q Consensus 359 L~~L~l~~N~ 368 (763)
|+.+++.+|.
T Consensus 359 L~~i~~~~~~ 368 (394)
T 4gt6_A 359 LNNIEYSGSR 368 (394)
T ss_dssp CCEEEESSCH
T ss_pred CCEEEECCce
Confidence 6666665553
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.24 E-value=4.6e-11 Score=129.72 Aligned_cols=255 Identities=11% Similarity=-0.001 Sum_probs=138.9
Q ss_pred CCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCcc
Q 046240 88 NLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGNS 167 (763)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~ 167 (763)
.++.+-..+|.++++|+++.|..+ ++ .|++.+|.++++|+.++|.+| ++.+....|.++.+|+.+.+..+
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~-------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~- 127 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VR-------EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM- 127 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CC-------EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-cc-------CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-
Confidence 355566678999999999999754 64 899999999999999999866 77677889999999999887655
Q ss_pred cccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccCCccccceeecccccccC
Q 046240 168 FSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTG 247 (763)
Q Consensus 168 l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 247 (763)
+..+...+|.+...++... .+.....-...|.++. +|+.+.+.++. ......+|.++++|+.+.+..| ++.
T Consensus 128 l~~i~~~aF~~~~~~~~~~------~~~~~~i~~~aF~~c~-~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~ 198 (394)
T 4fs7_A 128 LKSIGVEAFKGCDFKEITI------PEGVTVIGDEAFATCE-SLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKI 198 (394)
T ss_dssp CCEECTTTTTTCCCSEEEC------CTTCCEECTTTTTTCT-TCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCE
T ss_pred eeeecceeeeccccccccc------CccccccchhhhcccC-CCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceE
Confidence 3334444444443322111 1112222223333333 44444444332 2233444444444444444433 221
Q ss_pred CCCccccccCC--------------------CCccEEEecCCccccCCCCccccccCCcccEEEcccccccccCCc----
Q 046240 248 PIPVTFGRLQN--------------------SKLDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNNFSGDIPA---- 303 (763)
Q Consensus 248 ~~p~~~~~l~~--------------------~~L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~---- 303 (763)
.....|.+... ..|+.+.+..+. +..... .+.+...|+.+.+..+... +...
T Consensus 199 I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~-~~i~~~--~f~~~~~l~~~~~~~~~~~-i~~~~F~~ 274 (394)
T 4fs7_A 199 IRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSF-TELGKS--VFYGCTDLESISIQNNKLR-IGGSLFYN 274 (394)
T ss_dssp ECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECTTC-CEECSS--TTTTCSSCCEEEECCTTCE-ECSCTTTT
T ss_pred eCchhhccccccceeecCCCceEeehhhcccCCCceEEECCCc-eecccc--cccccccceeEEcCCCcce-eecccccc
Confidence 22222222211 124444443221 111112 4556666666666655332 3333
Q ss_pred -----------------ccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCceEEccc
Q 046240 304 -----------------TIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSF 366 (763)
Q Consensus 304 -----------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 366 (763)
.|.++.+|+.+.+..+ ++.....+|.++++|+.++|.++ ++.+...+|.++.+|+.+++..
T Consensus 275 ~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~ 352 (394)
T 4fs7_A 275 CSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPL 352 (394)
T ss_dssp CTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCT
T ss_pred ccccceeccCceeeccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECc
Confidence 4445555555555443 44344455666666666666533 5555556666666666666654
Q ss_pred c
Q 046240 367 N 367 (763)
Q Consensus 367 N 367 (763)
|
T Consensus 353 ~ 353 (394)
T 4fs7_A 353 S 353 (394)
T ss_dssp T
T ss_pred c
Confidence 4
No 405
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=4.2e-11 Score=122.28 Aligned_cols=147 Identities=14% Similarity=0.087 Sum_probs=114.4
Q ss_pred HHHHhccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CCccceEEeeeecCCceEEE
Q 046240 471 SRATNRFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIR-HRNLVKIISGCSNDDFKALV 549 (763)
Q Consensus 471 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 549 (763)
...-+.|.....++.|+.+.||++... ++.+++|+...........+.+|+.+++.+. +..+.++++++...+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 334467877888888888999999765 6789999987532223346888999999984 67788999999888899999
Q ss_pred EEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 046240 550 LEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFR-------------------------------------- 591 (763)
Q Consensus 550 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~-------------------------------------- 591 (763)
|||++|.++.+..... .....++.++++++..||..
T Consensus 89 ~e~i~G~~l~~~~~~~------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 89 MSEADGVLCSEEYEDE------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EECCSSEEHHHHCCTT------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEecCCeehhhccCCc------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 9999999997764211 12346788999999999861
Q ss_pred ------------------CCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 592 ------------------HTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 592 ------------------h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
+...++|||++|.||+++++..+.|.||+.+..
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 114589999999999998766677999987654
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.14 E-value=4.1e-10 Score=122.24 Aligned_cols=265 Identities=8% Similarity=0.131 Sum_probs=178.2
Q ss_pred CceEEEEecCCC---CCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCccc
Q 046240 77 HRVTALNISSLN---LQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPIT 153 (763)
Q Consensus 77 ~~v~~L~L~~~~---l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~ 153 (763)
.+++.+.+..|. ++.+-..+|.++.+|+.+.+..+ ++ .++...|.+..+|+.+.+..+ ++.+....|.
T Consensus 87 ~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-------~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~ 157 (394)
T 4gt6_A 87 TSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-------EIDSEAFHHCEELDTVTIPEG-VTSVADGMFS 157 (394)
T ss_dssp TTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-------EECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred ccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-------eehhhhhhhhcccccccccce-eeeeccccee
Confidence 578888887653 66555678888888988887654 32 677888888888888888754 4446667788
Q ss_pred CCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccc----------------------
Q 046240 154 NASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISL---------------------- 211 (763)
Q Consensus 154 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L---------------------- 211 (763)
++.+|+.+.+.++ ++.+...+|.+ .+|+.+.+ .. .+.......+.+.. +|
T Consensus 158 ~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~i----p~-~~~~i~~~af~~c~-~l~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
T 4gt6_A 158 YCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHI----PA-KVTRIGTNAFSECF-ALSTITSDSESYPAIDNVLYEKSA 229 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEE----CT-TCCEECTTTTTTCT-TCCEEEECCSSSCBSSSCEEEECT
T ss_pred cccccccccccce-eeEeccccccc-cceeEEEE----CC-cccccccchhhhcc-ccceecccccccccccceeecccc
Confidence 8888888888665 44455556654 34555542 11 11111111222221 22
Q ss_pred ---------------cEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCC
Q 046240 212 ---------------ERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIP 276 (763)
Q Consensus 212 ---------------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p 276 (763)
..+.+. +.++.....+|.++.+|+.+.+..+..+ .....|.+... |+.+.+. +.++ .++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~--L~~i~l~-~~i~-~I~ 303 (394)
T 4gt6_A 230 NGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPA--LQDIEFS-SRIT-ELP 303 (394)
T ss_dssp TSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTT--CCEEECC-TTCC-EEC
T ss_pred cccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccc--cccccCC-Cccc-ccC
Confidence 222222 3344455678999999999999877665 67778888876 9999996 4565 344
Q ss_pred CccccccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhh
Q 046240 277 SCIDIGNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKL 356 (763)
Q Consensus 277 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 356 (763)
.. .|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.....+|.++++|+.+++.+|... ...+...
T Consensus 304 ~~-aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~ 377 (394)
T 4gt6_A 304 ES-VFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTD 377 (394)
T ss_dssp TT-TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCC
T ss_pred ce-eecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhcc
Confidence 42 7999999999999865 77778899999999999999765 77567789999999999999998653 2456677
Q ss_pred ccCceEEcccccCC
Q 046240 357 LYLKKLNLSFNKLE 370 (763)
Q Consensus 357 ~~L~~L~l~~N~l~ 370 (763)
..|+.+.+..|.+.
T Consensus 378 ~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 378 SGLQNLPVAPGSID 391 (394)
T ss_dssp CCC-----------
T ss_pred CCCCEEEeCCCCEE
Confidence 88888888776543
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=1.3e-10 Score=118.33 Aligned_cols=129 Identities=14% Similarity=0.099 Sum_probs=97.3
Q ss_pred cccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCc--cceEEeeeecCCceEEEEEccCCCChhhh
Q 046240 484 GIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRN--LVKIISGCSNDDFKALVLEYMPNGSLDIF 561 (763)
Q Consensus 484 g~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 561 (763)
+.|..+.||++...+|..+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 355669999998877889999997643 2245678999999885444 556888888888899999999998884
Q ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------------
Q 046240 562 LYSSTCMLDIFQRLNIMIDVASALEYLNFRH------------------------------------------------- 592 (763)
Q Consensus 562 l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h------------------------------------------------- 592 (763)
... .+ ...++.++++.+..||...
T Consensus 104 ~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 176 (264)
T 1nd4_A 104 SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKA 176 (264)
T ss_dssp TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHH
T ss_pred cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHH
Confidence 211 11 2356778888888885421
Q ss_pred ------CCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 593 ------TTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 593 ------~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
...++|||++|.||++++++.+.|.||+.+..
T Consensus 177 ~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 177 RMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12299999999999998876677999998764
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.95 E-value=1.5e-08 Score=109.16 Aligned_cols=261 Identities=11% Similarity=0.079 Sum_probs=141.4
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.+.+.. +++.+-..+|.++.+|+.++|..+ ++ .|+..+|.+. +|+.+.+..+ ++.+...+|.+.
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~-------~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~- 113 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT-------SIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT- 113 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC-------EECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce-------EechhhhcCC-CCceEECCce-eeEeccceeccC-
Confidence 3577777764 466566678888888888888654 53 6777777665 5777776644 554555566554
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccc--------------
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSIT-------------- 222 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~-------------- 222 (763)
+|+.+.+.++- +.+...+|.+. +|+.+. ..+.++..-...+.... +|+.+.+..+...
T Consensus 114 ~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~-----~~~~v~~i~~~~f~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (379)
T 4h09_A 114 DLDDFEFPGAT-TEIGNYIFYNS-SVKRIV-----IPKSVTTIKDGIGYKAE-NLEKIEVSSNNKNYVAENYVLYNKNKT 185 (379)
T ss_dssp CCSEEECCTTC-CEECTTTTTTC-CCCEEE-----ECTTCCEECSCTTTTCT-TCCEEEECTTCSSEEEETTEEEETTSS
T ss_pred CcccccCCCcc-ccccccccccc-eeeeee-----ccceeeccccchhcccc-cccccccccccceeecccceecccccc
Confidence 67777776553 32444455443 233222 11223323333333333 4444444332211
Q ss_pred ---------------------cccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCcccc
Q 046240 223 ---------------------GNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDI 281 (763)
Q Consensus 223 ---------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~ 281 (763)
......+....+|+.+.+..+ ++......|.+... |+.+.+..+ ++..-.. .|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~--L~~i~lp~~-v~~I~~~--aF 259 (379)
T 4h09_A 186 ILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKA--LDEIAIPKN-VTSIGSF--LL 259 (379)
T ss_dssp EEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSS--CCEEEECTT-CCEECTT--TT
T ss_pred eeccccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCcc--ceEEEcCCC-ccEeCcc--cc
Confidence 122334444555555555443 22234444555544 666666544 3322222 45
Q ss_pred ccCCcccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhccCce
Q 046240 282 GNLKVVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKK 361 (763)
Q Consensus 282 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 361 (763)
.+...|+.+.+..+ ++.+...+|.++++|+.+.+.++.++.....+|.++.+|+.+.|.++ ++.+...+|.++.+|+.
T Consensus 260 ~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 337 (379)
T 4h09_A 260 QNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALST 337 (379)
T ss_dssp TTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCC
T ss_pred ceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCE
Confidence 55666666666433 44444556666666666666666665444556666666666666543 55555566666666666
Q ss_pred EEcc
Q 046240 362 LNLS 365 (763)
Q Consensus 362 L~l~ 365 (763)
+.+.
T Consensus 338 i~ip 341 (379)
T 4h09_A 338 ISYP 341 (379)
T ss_dssp CCCC
T ss_pred EEEC
Confidence 6553
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=3.4e-10 Score=120.37 Aligned_cols=211 Identities=15% Similarity=0.175 Sum_probs=113.4
Q ss_pred CCCccEEEcccccccc-c-------CCCcccCCCCCCeeeecCcccccccccccCCCCchhhhhhhhhccCCcccccCCc
Q 046240 131 LPNVKALSLAYNRFSG-T-------IQSPITNASKLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPS 202 (763)
Q Consensus 131 l~~L~~L~L~~N~i~~-~-------~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~ 202 (763)
+..++.|.+......+ . +..++..+++|+.|.+.++..... .+..+. .+.++.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~---~is~~~----------------~~~L~~ 166 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ---EISWIE----------------QVDLSP 166 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC---CGGGCB----------------CCBCHH
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc---cccccc----------------ccCHHH
Confidence 4567788888665442 1 123355677888888876543210 000000 001111
Q ss_pred ccccccccccEEEeecCc-cccccccccCCccccceeecccccccCCCCcccc--ccCCCCccEEEecC--CccccC---
Q 046240 203 SIVNLSISLERLYISNCS-ITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFG--RLQNSKLDTLSLCG--NSFSGS--- 274 (763)
Q Consensus 203 ~~~~l~~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~~~L~~L~L~~--N~l~~~--- 274 (763)
.+..++ +|++|+|++|. +. ++. + .+++|++|+|..|.++......+. .+++ |+.|+|+. |...+.
T Consensus 167 ll~~~P-~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~--L~~L~L~~~~~~~~~~~~~ 239 (362)
T 2ra8_A 167 VLDAMP-LLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPN--LEKLVLYVGVEDYGFDGDM 239 (362)
T ss_dssp HHHTCT-TCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTT--CCEEEEECBCGGGTCCSCG
T ss_pred HHhcCC-CCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCC--CcEEEEeccccccccchhH
Confidence 122233 67777777663 22 222 3 267777777777776533333333 3443 77777643 221111
Q ss_pred --CCCccccccCCcccEEEcccccccccCCcccC---CCcCccEEEccCccccCc----ccccccccccccEEeCcCCcc
Q 046240 275 --IPSCIDIGNLKVVVEINLSRNNFSGDIPATIG---GLKDVQNISLPYNRLEGP----IPESFGYLTSLEILDLSNNKI 345 (763)
Q Consensus 275 --~p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l 345 (763)
+........+++|++|+|++|.+....+..+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|
T Consensus 240 ~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 240 NVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp GGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred HHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 00100113467788888888877643333332 467888888888887753 333445678888888888877
Q ss_pred CCccchhhhhhccCceEEccccc
Q 046240 346 SGFILISLEKLLYLKKLNLSFNK 368 (763)
Q Consensus 346 ~~~~~~~~~~l~~L~~L~l~~N~ 368 (763)
+......+...- ...+++++|+
T Consensus 320 ~d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 320 SDEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp CHHHHHHHHHHC-CSEEECCSBC
T ss_pred CHHHHHHHHHHc-CCEEEecCCc
Confidence 754444444311 3567777776
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=7.8e-09 Score=110.59 Aligned_cols=142 Identities=13% Similarity=0.155 Sum_probs=106.3
Q ss_pred cCceecccCCceEEEEEecCCceEEEEEee--hhh-HHHHHHHHHHHHHHHhCC--CCccceEEeeeecC---CceEEEE
Q 046240 479 RDNLIGIGSFGYVYKAELDDGIEVAIKVFH--QEC-ARAMKSFEVECEVMKNIR--HRNLVKIISGCSND---DFKALVL 550 (763)
Q Consensus 479 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 550 (763)
..+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999998764 578888875 332 123456788999999996 45688899988776 4589999
Q ss_pred EccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 046240 551 EYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRH-------------------------------------- 592 (763)
Q Consensus 551 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h-------------------------------------- 592 (763)
||++|..+.+... ..++..++..++.+++++|..||...
T Consensus 121 e~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9999988754221 13567788889999999999998621
Q ss_pred -----------------CCCeEeCCCCCCCEEecCCCc--EEEeeecCcee
Q 046240 593 -----------------TTPIIHCDLKSSNVLLDEDMI--AHLSDFGIAKL 624 (763)
Q Consensus 593 -----------------~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~~ 624 (763)
...++|||+++.||+++.++. +.|.||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997653 68999999875
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.82 E-value=7.2e-10 Score=117.81 Aligned_cols=206 Identities=16% Similarity=0.222 Sum_probs=116.5
Q ss_pred CCCCCEEEcCCCcccCCCcc---ccCccccccccCCCccEEEccccccc---------ccCCCcccCCCCCCeeeecCcc
Q 046240 100 LPSLTKLALGYNSLVGNNSL---SGSLPSRIDLALPNVKALSLAYNRFS---------GTIQSPITNASKLTILELGGNS 167 (763)
Q Consensus 100 l~~L~~L~L~~n~l~~~~~~---~~~lp~~~~~~l~~L~~L~L~~N~i~---------~~~p~~~~~l~~L~~L~L~~N~ 167 (763)
++.++.|.+......+ +.. ...+...+ ..+++|+.|.+..+... +.+...+..+++|+.|+|++|.
T Consensus 106 ~~~v~~L~lg~~~~~~-~~~~~~~~~L~~s~-~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~ 183 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEG-EDCSDIADGIVENK-EKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTN 183 (362)
T ss_dssp GGGCSEEEECCCCSSS-CCSHHHHHHHHTTH-HHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCB
T ss_pred chhcceEEEcccccCC-CcHHHHHHHHHHhh-hhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCC
Confidence 3567889888654321 000 00112222 26789999999776432 1133344566777777777662
Q ss_pred -cccccccccCCCCchhhhhhhhhccCCcccccCCcccccccccccEEEeecCccccccccccC--Cccccceeeccc--
Q 046240 168 -FSGFIPNTIGNLRNIEWLGLVIGLIGNPLNGILPSSIVNLSISLERLYISNCSITGNIPQVMG--NLSIFLLLDLEL-- 242 (763)
Q Consensus 168 -l~~~~p~~~~~l~~L~~L~L~~~l~~n~l~~~~p~~~~~l~~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~-- 242 (763)
++ ++. +. ++ +|++|+|..|.+.......+. .+++|++|+|+.
T Consensus 184 ~l~--l~~-~~-~~-----------------------------~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~ 230 (362)
T 2ra8_A 184 NLS--IGK-KP-RP-----------------------------NLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGV 230 (362)
T ss_dssp TCB--CCS-CB-CT-----------------------------TCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBC
T ss_pred Cce--ecc-cc-CC-----------------------------CCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccc
Confidence 11 111 11 22 666777776666543333333 567777777643
Q ss_pred ccccCC-----CCcccc--ccCCCCccEEEecCCccccCCCCc-cccccCCcccEEEcccccccccC----CcccCCCcC
Q 046240 243 NKLTGP-----IPVTFG--RLQNSKLDTLSLCGNSFSGSIPSC-IDIGNLKVVVEINLSRNNFSGDI----PATIGGLKD 310 (763)
Q Consensus 243 N~l~~~-----~p~~~~--~l~~~~L~~L~L~~N~l~~~~p~~-~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~ 310 (763)
|...+. +...+. .+ ++|++|+|.+|.+.+..+.. +....+++|++|+|+.|.|+... +..+..+++
T Consensus 231 ~~~~~~~~~~~l~~~l~~~~~--p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~ 308 (362)
T 2ra8_A 231 EDYGFDGDMNVFRPLFSKDRF--PNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKH 308 (362)
T ss_dssp GGGTCCSCGGGTGGGSCTTTC--TTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTT
T ss_pred cccccchhHHHHHHHHhcCCC--CCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCc
Confidence 221111 111121 23 34888888888876432220 01124788999999999988643 333455789
Q ss_pred ccEEEccCccccCcccccccc-cccccEEeCcCCc
Q 046240 311 VQNISLPYNRLEGPIPESFGY-LTSLEILDLSNNK 344 (763)
Q Consensus 311 L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~ 344 (763)
|+.|+|++|.|+...-..+.. + ...+++++|+
T Consensus 309 L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 309 LKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred ceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 999999999887544444433 2 3668998887
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.81 E-value=1.9e-11 Score=123.21 Aligned_cols=24 Identities=17% Similarity=0.022 Sum_probs=19.3
Q ss_pred CCCcccceeecCCCCceEEEEecC
Q 046240 63 SVCNWIGITCDVNSHRVTALNISS 86 (763)
Q Consensus 63 ~~c~w~gv~c~~~~~~v~~L~L~~ 86 (763)
..|.|.|+.|+.+..+|+.+...+
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHHhcCcEEECCCCCEEEEEEecC
Confidence 479999999998877887776655
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=4.3e-09 Score=109.76 Aligned_cols=185 Identities=15% Similarity=0.170 Sum_probs=122.0
Q ss_pred CceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhC-CCCc--cceEEeeeecCC---ceEEEEEcc
Q 046240 480 DNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNI-RHRN--LVKIISGCSNDD---FKALVLEYM 553 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv~e~~ 553 (763)
.+.++.|....||+.. ..+++|+.... .....+.+|..+++.+ .+.. +.++++.....+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568899999999864 56899986543 3356788899999888 3332 445555544333 458999999
Q ss_pred CCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 046240 554 PNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFR------------------------------------------ 591 (763)
Q Consensus 554 ~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~------------------------------------------ 591 (763)
+|.++...... .++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888653321 245666777888888888888741
Q ss_pred -------------CCCCeEeCCCCCCCEEecC--CCcEEEeeecCceecCCCCCccccccccccccc---cCccccCC--
Q 046240 592 -------------HTTPIIHCDLKSSNVLLDE--DMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGY---MAPEYGIE-- 651 (763)
Q Consensus 592 -------------h~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y---~aPE~~~~-- 651 (763)
....++|+|++|.||++++ +..+.|.||+.+..-++...- .....+ ..|+....
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl------~~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF------ISLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH------HTTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH------HHHHhhccccCHHHHHHHH
Confidence 1235899999999999998 556889999998764321100 000001 12221100
Q ss_pred ---CC---------CCcchhHHHHHHHHHHHHcCCCCCch
Q 046240 652 ---RK---------VSTRSDIYSYGIMLIETFTRKKPADK 679 (763)
Q Consensus 652 ---~~---------~~~~~Dv~slGv~l~elltg~~p~~~ 679 (763)
+. .....+.|++|.++|++.+|..+|-.
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 01 11236899999999999999888644
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.81 E-value=9.6e-08 Score=102.85 Aligned_cols=257 Identities=9% Similarity=0.047 Sum_probs=179.9
Q ss_pred CceEEEEecCCCCCCcCCcccCCCCCCCEEEcCCCcccCCCccccCccccccccCCCccEEEcccccccccCCCcccCCC
Q 046240 77 HRVTALNISSLNLQGEIPHEIGYLPSLTKLALGYNSLVGNNSLSGSLPSRIDLALPNVKALSLAYNRFSGTIQSPITNAS 156 (763)
Q Consensus 77 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 156 (763)
.+++.++|..+ ++.+-..+|.+. +|+.+.+..+ ++ .++..+|.. .+|+.+.+..+ ++.+....|.+.
T Consensus 69 ~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-------~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~- 135 (379)
T 4h09_A 69 YNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-------KFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS- 135 (379)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-------EECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-
T ss_pred CCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-------Eeccceecc-CCcccccCCCc-cccccccccccc-
Confidence 57999999754 776666788886 6888888654 42 677778854 47899988765 333445555554
Q ss_pred CCCeeeecCcccccccccccCCCCchhhhhhhhh-------------------------------ccCCcccccCCcccc
Q 046240 157 KLTILELGGNSFSGFIPNTIGNLRNIEWLGLVIG-------------------------------LIGNPLNGILPSSIV 205 (763)
Q Consensus 157 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~~-------------------------------l~~n~l~~~~p~~~~ 205 (763)
+|+.+.+..+ ++.+...+|.+..+|+....... ...+.........+.
T Consensus 136 ~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~ 214 (379)
T 4h09_A 136 SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFS 214 (379)
T ss_dssp CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTT
T ss_pred eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccc
Confidence 4665555443 44455566666666655442100 000011111222333
Q ss_pred cccccccEEEeecCccccccccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccCC
Q 046240 206 NLSISLERLYISNCSITGNIPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNLK 285 (763)
Q Consensus 206 ~l~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l~ 285 (763)
... +|+.+.+..+ +......+|.++..|+.+.+..+ ++......|.+..+ |+.+.+..+ +. .++.. .|.+++
T Consensus 215 ~~~-~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~--l~~i~l~~~-i~-~i~~~-aF~~c~ 286 (379)
T 4h09_A 215 YGK-NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTA--LKTLNFYAK-VK-TVPYL-LCSGCS 286 (379)
T ss_dssp TCS-SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTT--CCEEEECCC-CS-EECTT-TTTTCT
T ss_pred ccc-ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeeh--hcccccccc-ce-ecccc-cccccc
Confidence 344 7888888655 55577788999999999999876 66566778888876 999999765 54 33332 789999
Q ss_pred cccEEEcccccccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcCCccCCccchhhhhhc
Q 046240 286 VVVEINLSRNNFSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSNNKISGFILISLEKLL 357 (763)
Q Consensus 286 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 357 (763)
+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.....+|.++++|+.+.+..+ ++.+...+|.+..
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 9999999999999888899999999999999865 76566789999999999999765 7777777786653
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.50 E-value=7.7e-07 Score=93.29 Aligned_cols=137 Identities=15% Similarity=0.204 Sum_probs=99.5
Q ss_pred ccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCC----CccceEEeeeecCCceEEEEE
Q 046240 476 RFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRH----RNLVKIISGCSNDDFKALVLE 551 (763)
Q Consensus 476 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e 551 (763)
.+...+.++.|....||+. |..+++|+..... ....+.+|..+++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4556778999999999998 6789999875432 23457889999998865 234455555 56789999
Q ss_pred ccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 046240 552 YMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRH--------------------------------------- 592 (763)
Q Consensus 552 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h--------------------------------------- 592 (763)
|++|.++...... .++..+...++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988643221 2455556667777777777776321
Q ss_pred ---------------------CCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 593 ---------------------TTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 593 ---------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
...++|+|++|.||+++.+..+.|.||+.+..-
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 223599999999999999766799999998653
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.40 E-value=3.1e-08 Score=99.72 Aligned_cols=79 Identities=22% Similarity=0.310 Sum_probs=41.8
Q ss_pred cCCcccEEEcccccccc--cCCcccCCCcCccEEEccCccccCcccccccccc--cccEEeCcCCccCCccc-------h
Q 046240 283 NLKVVVEINLSRNNFSG--DIPATIGGLKDVQNISLPYNRLEGPIPESFGYLT--SLEILDLSNNKISGFIL-------I 351 (763)
Q Consensus 283 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~-------~ 351 (763)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+++..| .
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34555555555555554 2334445556666666666666543 2233333 66666666666654332 2
Q ss_pred hhhhhccCceEE
Q 046240 352 SLEKLLYLKKLN 363 (763)
Q Consensus 352 ~~~~l~~L~~L~ 363 (763)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 355566666554
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=6.6e-08 Score=92.57 Aligned_cols=62 Identities=21% Similarity=0.261 Sum_probs=29.5
Q ss_pred cCccEEEccCccccCc----ccccccccccccEEeC--cCCccCCcc----chhhhhhccCceEEcccccCC
Q 046240 309 KDVQNISLPYNRLEGP----IPESFGYLTSLEILDL--SNNKISGFI----LISLEKLLYLKKLNLSFNKLE 370 (763)
Q Consensus 309 ~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 370 (763)
++|++|+|++|.|... +...+...++|++|+| ++|.|.... ...+...+.|++|+|++|.+.
T Consensus 93 ~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 93 NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4444444444444432 2333444455555555 555555432 223333355666666655543
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.37 E-value=2.9e-06 Score=86.50 Aligned_cols=135 Identities=18% Similarity=0.115 Sum_probs=97.0
Q ss_pred eecccCCc-eEEEEEec-CCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CCccceEEeeeecCCceEEEEEccCCCCh
Q 046240 482 LIGIGSFG-YVYKAELD-DGIEVAIKVFHQECARAMKSFEVECEVMKNIR-HRNLVKIISGCSNDDFKALVLEYMPNGSL 558 (763)
Q Consensus 482 ~lg~G~~g-~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L 558 (763)
.+..|..+ .||+.... ++..+++|+-... ....+.+|..+|+.+. +--+.++++++...+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 44556555 68988665 5678999987643 3456778999998884 33467889999888999999999999887
Q ss_pred hhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------------
Q 046240 559 DIFLYSSTCMLDIFQRLNIMIDVASALEYLNFR----------------------------------------------- 591 (763)
Q Consensus 559 ~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~----------------------------------------------- 591 (763)
.+...... .....++.++++.+..||..
T Consensus 108 ~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 76543221 12334566666666666631
Q ss_pred --------CCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 592 --------HTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 592 --------h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
+...++|+|+.+.||++++++.+-|.||+.+..
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 122378999999999999887778999988764
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.33 E-value=4.3e-06 Score=86.88 Aligned_cols=136 Identities=15% Similarity=0.112 Sum_probs=93.3
Q ss_pred CceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCC---ccceEEeeee-cCCceEEEEEccCC
Q 046240 480 DNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHR---NLVKIISGCS-NDDFKALVLEYMPN 555 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 555 (763)
.+.++.|....||+. |..+++|+-.. ......+.+|.++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356778888899987 57789998532 23356788999999999642 3566677764 45568899999999
Q ss_pred CChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 046240 556 GSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFR-------------------------------------------- 591 (763)
Q Consensus 556 g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~-------------------------------------------- 591 (763)
..+...... .++..+...++.++++.|..||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888653211 123334444455555555444432
Q ss_pred -------------CCCCeEeCCCCCCCEEecC---CCc-EEEeeecCcee
Q 046240 592 -------------HTTPIIHCDLKSSNVLLDE---DMI-AHLSDFGIAKL 624 (763)
Q Consensus 592 -------------h~~~ivH~dlk~~NIll~~---~~~-~kl~Dfgla~~ 624 (763)
....++|+|++|.||+++. ++. +.|.||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 3345799999999999987 345 58999998765
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.33 E-value=2.4e-06 Score=87.80 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=60.3
Q ss_pred cCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCC---ccceEEeeeecCCceEEEEEccCC
Q 046240 479 RDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHR---NLVKIISGCSNDDFKALVLEYMPN 555 (763)
Q Consensus 479 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 555 (763)
..+.++.|.++.||++...+|+.+++|+...........+.+|++.++.+.+. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45679999999999999888999999996543222235678999999999764 577888763 46899999999
Q ss_pred CCh
Q 046240 556 GSL 558 (763)
Q Consensus 556 g~L 558 (763)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.24 E-value=9.8e-08 Score=91.36 Aligned_cols=66 Identities=12% Similarity=0.118 Sum_probs=44.7
Q ss_pred ccCCcccEEEccccccccc----CCcccCCCcCccEEEc--cCccccCc----ccccccccccccEEeCcCCccCC
Q 046240 282 GNLKVVVEINLSRNNFSGD----IPATIGGLKDVQNISL--PYNRLEGP----IPESFGYLTSLEILDLSNNKISG 347 (763)
Q Consensus 282 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 347 (763)
...+.|++|+|++|.|+.. +...+...++|++|+| ++|.|... +...+...++|++|+|++|.+..
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 3445666777777776642 3455666677888888 77888754 33445556889999999998764
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.16 E-value=8.3e-06 Score=86.76 Aligned_cols=141 Identities=11% Similarity=0.115 Sum_probs=90.1
Q ss_pred cCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCc--cceEEeeeecC-CceEEEEEccCC
Q 046240 479 RDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRN--LVKIISGCSND-DFKALVLEYMPN 555 (763)
Q Consensus 479 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~ 555 (763)
..+.++.|....+|+... +|..+++|+.... ..+.+|+.+++.+.... +.++++++... +..++||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 346688899999999876 4788999987533 24778889999886433 56677776654 568999999998
Q ss_pred CChhhh------------------hccCC----C------------CCCHHHH---------------------HHHHHH
Q 046240 556 GSLDIF------------------LYSST----C------------MLDIFQR---------------------LNIMID 580 (763)
Q Consensus 556 g~L~~~------------------l~~~~----~------------~~~~~~~---------------------~~i~~~ 580 (763)
..+.+. ++... . .-.|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 766421 01000 0 0001111 011111
Q ss_pred HHHHHHHHHhc-CCCCeEeCCCCCCCEEecCCCcEEEeeecCceec
Q 046240 581 VASALEYLNFR-HTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLL 625 (763)
Q Consensus 581 ia~~L~~Lh~~-h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 625 (763)
+.....++... ....++|+|+++.||++++++.+.|.||+.+..-
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 22222333211 1246899999999999988777889999988753
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.10 E-value=6e-06 Score=87.88 Aligned_cols=81 Identities=6% Similarity=-0.027 Sum_probs=56.6
Q ss_pred Ccee-cccCCceEEEEEec-------CCceEEEEEeehhhH---HHHHHHHHHHHHHHhCC-C--CccceEEeeeecC--
Q 046240 480 DNLI-GIGSFGYVYKAELD-------DGIEVAIKVFHQECA---RAMKSFEVECEVMKNIR-H--RNLVKIISGCSND-- 543 (763)
Q Consensus 480 ~~~l-g~G~~g~v~~~~~~-------~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~-- 543 (763)
.+.| +.|....+|+.... +++.+++|+...... .....+.+|+.+++.+. + -.+.++++++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78888999998664 267899998654320 01245678888888884 3 3567788887655
Q ss_pred -CceEEEEEccCCCChhh
Q 046240 544 -DFKALVLEYMPNGSLDI 560 (763)
Q Consensus 544 -~~~~lv~e~~~~g~L~~ 560 (763)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35789999999977654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.88 E-value=7e-06 Score=76.56 Aligned_cols=81 Identities=21% Similarity=0.171 Sum_probs=35.8
Q ss_pred ccEEEcccccccccCCcccCCCcCccEEEccCcc-ccCccccccccc----ccccEEeCcCC-ccCCccchhhhhhccCc
Q 046240 287 VVEINLSRNNFSGDIPATIGGLKDVQNISLPYNR-LEGPIPESFGYL----TSLEILDLSNN-KISGFILISLEKLLYLK 360 (763)
Q Consensus 287 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~L~ 360 (763)
|+.||++++.++...-..+.++++|+.|+|++|. |+..--..++.+ ++|++|+|++| +|+...-..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 4444444444443333334444455555555442 333222233332 24555555554 24444334444455555
Q ss_pred eEEcccc
Q 046240 361 KLNLSFN 367 (763)
Q Consensus 361 ~L~l~~N 367 (763)
.|+|+++
T Consensus 143 ~L~L~~c 149 (176)
T 3e4g_A 143 YLFLSDL 149 (176)
T ss_dssp EEEEESC
T ss_pred EEECCCC
Confidence 5555554
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.77 E-value=5.8e-05 Score=81.50 Aligned_cols=75 Identities=13% Similarity=0.188 Sum_probs=48.9
Q ss_pred CceecccCCceEEEEEec-CCceEEEEEeehhhH-------HHHHHHHHHHHHHHhCCC--Cc-cceEEeeeecCCceEE
Q 046240 480 DNLIGIGSFGYVYKAELD-DGIEVAIKVFHQECA-------RAMKSFEVECEVMKNIRH--RN-LVKIISGCSNDDFKAL 548 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 548 (763)
.+.+|.|..+.||++... +++.|+||....... .....+..|.++++.+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999754 468899997643211 112445778888887732 33 4455544 3445689
Q ss_pred EEEccCCC
Q 046240 549 VLEYMPNG 556 (763)
Q Consensus 549 v~e~~~~g 556 (763)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.77 E-value=0.00014 Score=76.57 Aligned_cols=139 Identities=16% Similarity=0.207 Sum_probs=78.7
Q ss_pred ceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCC--CccceEEe------eeecCCceEEEEEc
Q 046240 481 NLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRH--RNLVKIIS------GCSNDDFKALVLEY 552 (763)
Q Consensus 481 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e~ 552 (763)
+.++.|..+.||+....+| .+++|+..... ..+..|..+++.+.. -.+.+++. +....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3455567889999987655 58999887532 223345555554421 12333333 11245667899999
Q ss_pred cCCCChhh--------------hhcc--CCC-----------CCCHHHHH------------------------------
Q 046240 553 MPNGSLDI--------------FLYS--STC-----------MLDIFQRL------------------------------ 575 (763)
Q Consensus 553 ~~~g~L~~--------------~l~~--~~~-----------~~~~~~~~------------------------------ 575 (763)
++|..+.. .++. ... ...|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 99875430 0111 000 11232110
Q ss_pred -HHHHHHHHHHHHHHh----------cCCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 576 -NIMIDVASALEYLNF----------RHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 576 -~i~~~ia~~L~~Lh~----------~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
.+...+.+++.+|+. .....++|||+++.||+++.++.+.|.||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 011123345556642 1357899999999999998888999999997653
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.73 E-value=0.00024 Score=73.49 Aligned_cols=75 Identities=12% Similarity=0.122 Sum_probs=60.1
Q ss_pred CceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC---CCccceEEeeeecCCceEEEEEccCCC
Q 046240 480 DNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIR---HRNLVKIISGCSNDDFKALVLEYMPNG 556 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g 556 (763)
.+.|+.|....+|+.... +..+++|+.... ....+..|...|+.+. ...+.++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 456889999999999864 678899987643 2456788988888873 356888898888888899999999987
Q ss_pred Ch
Q 046240 557 SL 558 (763)
Q Consensus 557 ~L 558 (763)
.+
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.65 E-value=7.6e-05 Score=76.65 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=57.3
Q ss_pred ccCcCceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-C--CccceEEeeeecCCceEEEEEc
Q 046240 476 RFGRDNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIR-H--RNLVKIISGCSNDDFKALVLEY 552 (763)
Q Consensus 476 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~e~ 552 (763)
+...++.+|.|..+.||+.+..||+.|++|+...........+..|+..|+.+. . --+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 345567789999999999999999999999876443333446788999999884 2 1344555542 34789999
Q ss_pred cCCCCh
Q 046240 553 MPNGSL 558 (763)
Q Consensus 553 ~~~g~L 558 (763)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987653
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.60 E-value=1.8e-05 Score=73.82 Aligned_cols=85 Identities=12% Similarity=0.116 Sum_probs=62.4
Q ss_pred ccEEEecCCccccCCCCccccccCCcccEEEccccc-ccccCCcccCCC----cCccEEEccCcc-ccCccccccccccc
Q 046240 261 LDTLSLCGNSFSGSIPSCIDIGNLKVVVEINLSRNN-FSGDIPATIGGL----KDVQNISLPYNR-LEGPIPESFGYLTS 334 (763)
Q Consensus 261 L~~L~L~~N~l~~~~p~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 334 (763)
|+.||++++.++..--. .+.++++|++|+|++|. |+...-..++.+ ++|++|+|++|. |+..--..+..+++
T Consensus 63 L~~LDLs~~~Itd~GL~--~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFD--HMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp EEEEEEESCCCCGGGGG--GGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred EeEEeCcCCCccHHHHH--HhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 77777777776643333 56778888888888885 665444556654 479999999974 87665667788999
Q ss_pred ccEEeCcCCc-cCC
Q 046240 335 LEILDLSNNK-ISG 347 (763)
Q Consensus 335 L~~L~L~~N~-l~~ 347 (763)
|+.|+|+++. ++.
T Consensus 141 L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 141 LKYLFLSDLPGVKE 154 (176)
T ss_dssp CCEEEEESCTTCCC
T ss_pred CCEEECCCCCCCCc
Confidence 9999999985 654
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.37 E-value=0.0003 Score=76.38 Aligned_cols=79 Identities=14% Similarity=0.140 Sum_probs=49.9
Q ss_pred CCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCcccccccc--ccccccCccccCCC---CCCcchhHHHHHHH
Q 046240 592 HTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQTQTL--ATIGYMAPEYGIER---KVSTRSDIYSYGIM 666 (763)
Q Consensus 592 h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~--g~~~y~aPE~~~~~---~~~~~~Dv~slGv~ 666 (763)
+...++|||++|.||+++.++ +++.||+.+..-++.- ...... -...|++|+..... ......++.+....
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~---Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF---DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQ 305 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH---HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH---HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHH
Confidence 567899999999999999876 9999999887532110 000001 12346666654321 11223556688888
Q ss_pred HHHHHcCC
Q 046240 667 LIETFTRK 674 (763)
Q Consensus 667 l~elltg~ 674 (763)
+|+.+++.
T Consensus 306 ~~~~y~~~ 313 (420)
T 2pyw_A 306 TWNLFNKR 313 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877653
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.34 E-value=0.00068 Score=70.59 Aligned_cols=157 Identities=13% Similarity=0.141 Sum_probs=88.6
Q ss_pred CChHHHHHHHhccCcC-----ceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCc--cceEE
Q 046240 465 LPYQDLSRATNRFGRD-----NLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRN--LVKII 537 (763)
Q Consensus 465 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~ 537 (763)
++.+++.....+|... +.|+.|....+|+....+| .+++|+.... .....+..|..+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4556666666667653 3466688889999987765 6889988652 12234556777777763212 23333
Q ss_pred ee------eecCCceEEEEEccCCCChhhh--------------hccC--C--CC----C---CHHHHHH----------
Q 046240 538 SG------CSNDDFKALVLEYMPNGSLDIF--------------LYSS--T--CM----L---DIFQRLN---------- 576 (763)
Q Consensus 538 ~~------~~~~~~~~lv~e~~~~g~L~~~--------------l~~~--~--~~----~---~~~~~~~---------- 576 (763)
.. ....+..+++++|++|..+... ++.. . .. . .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 1223567899999998654210 1110 0 00 1 1222100
Q ss_pred --HHHHHHHHHHHHHhc----CCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 577 --IMIDVASALEYLNFR----HTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 577 --i~~~ia~~L~~Lh~~----h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
+...+.+.++++... ....++|+|+++.||+++++..+.|.||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234445555321 235689999999999999876668999987653
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.09 E-value=0.00065 Score=60.23 Aligned_cols=56 Identities=20% Similarity=0.221 Sum_probs=30.6
Q ss_pred EEEccCcccc-CcccccccccccccEEeCcCCccCCccchhhhhhccCceEEcccccCC
Q 046240 313 NISLPYNRLE-GPIPESFGYLTSLEILDLSNNKISGFILISLEKLLYLKKLNLSFNKLE 370 (763)
Q Consensus 313 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 370 (763)
.++.+++.|+ ..+|..+ -++|+.|+|++|+|+.+.+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 1233222 134666666666666666666666666666666555554
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.05 E-value=0.0017 Score=67.98 Aligned_cols=139 Identities=12% Similarity=0.083 Sum_probs=72.9
Q ss_pred ceecccCCce-EEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-C-CccceEEeeeecCCceEEEEEccCCCC
Q 046240 481 NLIGIGSFGY-VYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIR-H-RNLVKIISGCSNDDFKALVLEYMPNGS 557 (763)
Q Consensus 481 ~~lg~G~~g~-v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~niv~l~~~~~~~~~~~lv~e~~~~g~ 557 (763)
+.++.|+... +|+....+|+.+++|...... ...+..|+.+++.+. + -.+.+++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455554443 677766546778888654321 123445677777663 2 23556676643333 78999997766
Q ss_pred hhhhhccC---------------------C----CCCCHHHHH--------------------HHHHHHHHHHHHHH---
Q 046240 558 LDIFLYSS---------------------T----CMLDIFQRL--------------------NIMIDVASALEYLN--- 589 (763)
Q Consensus 558 L~~~l~~~---------------------~----~~~~~~~~~--------------------~i~~~ia~~L~~Lh--- 589 (763)
+.+++... . ..++..... .....+.+.+..+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 54332110 0 011111000 00011111222221
Q ss_pred hcCCCCeEeCCCCCCCEEecCC----CcEEEeeecCcee
Q 046240 590 FRHTTPIIHCDLKSSNVLLDED----MIAHLSDFGIAKL 624 (763)
Q Consensus 590 ~~h~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~~ 624 (763)
..+...++|||+.+.||+++.+ +.+.|.||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1245679999999999999874 6899999998865
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.02 E-value=0.0045 Score=64.49 Aligned_cols=156 Identities=12% Similarity=0.117 Sum_probs=88.6
Q ss_pred CChHHHHHHHhccCc-----CceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCC--ccceEE
Q 046240 465 LPYQDLSRATNRFGR-----DNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHR--NLVKII 537 (763)
Q Consensus 465 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~ 537 (763)
++.+++...-..|.. ...++ |....||+....+|+.+++|+..... .....+..|..+++.+... .+.+++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 444555555455543 23466 77889999887778889999986331 1234556677777777421 234444
Q ss_pred ee-----eecCCceEEEEEccCCCChhh-----h---------hcc--C------CCCCCHHHH----HHH---------
Q 046240 538 SG-----CSNDDFKALVLEYMPNGSLDI-----F---------LYS--S------TCMLDIFQR----LNI--------- 577 (763)
Q Consensus 538 ~~-----~~~~~~~~lv~e~~~~g~L~~-----~---------l~~--~------~~~~~~~~~----~~i--------- 577 (763)
.. ....+..+++|||++|..+.. . ++. . ....++... ..+
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 43 122445678999998865421 0 111 0 011222211 000
Q ss_pred ------HHHHHHHHHHHHhc----CCCCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 578 ------MIDVASALEYLNFR----HTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 578 ------~~~ia~~L~~Lh~~----h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
...+.+.++.+... ....++|||+++.||+++ + .+.+.||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333211 345689999999999999 4 899999987754
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.01 E-value=0.0017 Score=66.88 Aligned_cols=71 Identities=8% Similarity=0.066 Sum_probs=45.2
Q ss_pred CceecccCCceEEEEEecCCceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCcc-ceEEeeeecCCceEEEEEcc-CCCC
Q 046240 480 DNLIGIGSFGYVYKAELDDGIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNL-VKIISGCSNDDFKALVLEYM-PNGS 557 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g~ 557 (763)
.+.++.|....+|+. ..+++|+....... .....+|+.+++.+....+ .+++++. .+..++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 678888999999998 56899987643211 1223567777777642222 4555543 33457899999 6655
Q ss_pred h
Q 046240 558 L 558 (763)
Q Consensus 558 L 558 (763)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 5
No 436
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.00 E-value=0.0019 Score=68.50 Aligned_cols=140 Identities=14% Similarity=0.161 Sum_probs=81.0
Q ss_pred CceecccCCceEEEEEec--------CCceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CCccceEEeeeecCCceEEEE
Q 046240 480 DNLIGIGSFGYVYKAELD--------DGIEVAIKVFHQECARAMKSFEVECEVMKNIR-HRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 550 (763)
.+.+..|-...+|+.... +++.+++|+.... ........+|..+++.+. +.-..++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 355666778889998775 3578999986432 122345668988888874 3333567776654 2899
Q ss_pred EccCCCChhhh-----------------hccC----CCCCC--HHHHHHHHHHHH-------------------HHHHHH
Q 046240 551 EYMPNGSLDIF-----------------LYSS----TCMLD--IFQRLNIMIDVA-------------------SALEYL 588 (763)
Q Consensus 551 e~~~~g~L~~~-----------------l~~~----~~~~~--~~~~~~i~~~ia-------------------~~L~~L 588 (763)
||++|..+..- ++.. ..... +.+..++..++. +.+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665321 1111 11122 223333332221 112222
Q ss_pred H----h-cCCCCeEeCCCCCCCEEecCC----CcEEEeeecCcee
Q 046240 589 N----F-RHTTPIIHCDLKSSNVLLDED----MIAHLSDFGIAKL 624 (763)
Q Consensus 589 h----~-~h~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~~ 624 (763)
. . .....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 1 133468999999999999876 6899999988764
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.98 E-value=0.00098 Score=59.05 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=18.8
Q ss_pred ccEEEcccccccccCCCcccCCCCCCeeeecCcccc
Q 046240 134 VKALSLAYNRFSGTIQSPITNASKLTILELGGNSFS 169 (763)
Q Consensus 134 L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 169 (763)
|++|+|++|+|+.+.++.|..+++|++|+|++|.+.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 444444444444444445555555555566665553
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.88 E-value=0.0021 Score=69.80 Aligned_cols=73 Identities=16% Similarity=0.193 Sum_probs=49.2
Q ss_pred CceecccCCceEEEEEecC--------CceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CCccceEEeeeecCCceEEEE
Q 046240 480 DNLIGIGSFGYVYKAELDD--------GIEVAIKVFHQECARAMKSFEVECEVMKNIR-HRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 550 (763)
.+.|+.|....+|+....+ ++.+++|+..... ....+.+|..+++.+. +.-..++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4567778889999998753 5789999884321 1134457888888874 3223567776543 3899
Q ss_pred EccCCCCh
Q 046240 551 EYMPNGSL 558 (763)
Q Consensus 551 e~~~~g~L 558 (763)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987554
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.88 E-value=0.0003 Score=66.74 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=37.6
Q ss_pred CcccEEEcccccccccC----CcccCCCcCccEEEccCccccCc----ccccccccccccEEeCcCC---ccCCc----c
Q 046240 285 KVVVEINLSRNNFSGDI----PATIGGLKDVQNISLPYNRLEGP----IPESFGYLTSLEILDLSNN---KISGF----I 349 (763)
Q Consensus 285 ~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N---~l~~~----~ 349 (763)
+.|+.|+|++|+|.... ...+..-+.|+.|+|++|.|... +-+.+..-+.|++|+|++| .+... +
T Consensus 70 ~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~i 149 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDM 149 (197)
T ss_dssp SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHH
T ss_pred CCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHH
Confidence 34444444444444221 12222334555555555555532 2223334455666666644 22321 2
Q ss_pred chhhhhhccCceEEcccc
Q 046240 350 LISLEKLLYLKKLNLSFN 367 (763)
Q Consensus 350 ~~~~~~l~~L~~L~l~~N 367 (763)
...+..-+.|+.|+++.|
T Consensus 150 a~aL~~N~tL~~L~l~~~ 167 (197)
T 1pgv_A 150 MMAIEENESLLRVGISFA 167 (197)
T ss_dssp HHHHHHCSSCCEEECCCC
T ss_pred HHHHHhCCCcCeEeccCC
Confidence 233444456666666544
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.84 E-value=0.00018 Score=68.35 Aligned_cols=113 Identities=11% Similarity=0.057 Sum_probs=62.7
Q ss_pred cccEEEeecC-ccccc----cccccCCccccceeecccccccCCCCccccccCCCCccEEEecCCccccCCCCccccccC
Q 046240 210 SLERLYISNC-SITGN----IPQVMGNLSIFLLLDLELNKLTGPIPVTFGRLQNSKLDTLSLCGNSFSGSIPSCIDIGNL 284 (763)
Q Consensus 210 ~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~~L~~L~L~~N~l~~~~p~~~~~~~l 284 (763)
+|++|+|++| +|... +.+++..-+.|+.|+|++|+|.......+.. .+..-
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~------------------------aL~~N 97 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIE------------------------LIETS 97 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHH------------------------HHHHC
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHH------------------------HHhcC
Confidence 6777888775 66532 2334455566666666666665322222211 22233
Q ss_pred CcccEEEccccccccc----CCcccCCCcCccEEEccCc---cccC----cccccccccccccEEeCcCCccC
Q 046240 285 KVVVEINLSRNNFSGD----IPATIGGLKDVQNISLPYN---RLEG----PIPESFGYLTSLEILDLSNNKIS 346 (763)
Q Consensus 285 ~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~----~~p~~~~~l~~L~~L~L~~N~l~ 346 (763)
+.|++|+|++|.|+.. +-.++..-+.|+.|+|++| .+.. .+...+..-+.|+.|+++.|.+.
T Consensus 98 ~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 98 PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred CccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 4556666666666532 2234445566778888754 3332 13344556678888888887654
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.68 E-value=0.0047 Score=67.32 Aligned_cols=74 Identities=16% Similarity=0.151 Sum_probs=48.0
Q ss_pred CceecccCCceEEEEEecC-CceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCcc-ceEEeeeecCCceEEEEEccCCCC
Q 046240 480 DNLIGIGSFGYVYKAELDD-GIEVAIKVFHQECARAMKSFEVECEVMKNIRHRNL-VKIISGCSNDDFKALVLEYMPNGS 557 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~ 557 (763)
.+.|+.|-...+|+....+ +..+++|+...... ..-+..+|..+++.+...++ .++++++. + .+|+||++|..
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4567778889999998775 57899998753321 11122578888888864444 56777763 2 25999999855
Q ss_pred h
Q 046240 558 L 558 (763)
Q Consensus 558 L 558 (763)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.62 E-value=0.0036 Score=66.53 Aligned_cols=74 Identities=14% Similarity=0.218 Sum_probs=44.8
Q ss_pred CceecccCCceEEEEEecC---------CceEEEEEeehhhHHHHHHHHHHHHHHHhCCCCc-cceEEeeeecCCceEEE
Q 046240 480 DNLIGIGSFGYVYKAELDD---------GIEVAIKVFHQECARAMKSFEVECEVMKNIRHRN-LVKIISGCSNDDFKALV 549 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 549 (763)
.+.++.|....+|+....+ +..+++|+....... ......|..+++.+...+ +.++++... -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC----CcEE
Confidence 3457778888999997654 268899987643221 122356888888774323 446665542 3689
Q ss_pred EEccCCCCh
Q 046240 550 LEYMPNGSL 558 (763)
Q Consensus 550 ~e~~~~g~L 558 (763)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999998654
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.59 E-value=0.022 Score=54.30 Aligned_cols=168 Identities=11% Similarity=0.024 Sum_probs=98.6
Q ss_pred CChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEecCCCcEEEeeecCceecCCCCCccccc
Q 046240 556 GSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLLDEDMIAHLSDFGIAKLLSGEDQSMTQT 635 (763)
Q Consensus 556 g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~ 635 (763)
-+|.+++...+.+++..+.+.++.|.+.+|.-+-.. +.-..+=..|..|++..+|.|...+ ..+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 378999988888999999999999999998776321 1111223456889999999887763 1110
Q ss_pred cccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhhhhhhhhhhhcccCChhHHHHHHhhcCCCccccH
Q 046240 636 QTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFAAELSLKHWVNGLLPVSLMEVVNKTLLSPPEKDF 715 (763)
Q Consensus 636 ~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~ 715 (763)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-+. ...+++++..+++.|........
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e------------E~eLS~~LE~LL~~Mt~~~~d~~- 161 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE------------ERELSPPLEQLIDHMANTVEADG- 161 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE------------EECCCHHHHHHHHHHTTCCC----
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc------------chhhCHHHHHHHHHHHhcccccc-
Confidence 1122456888753 3556788999999999999874444222 34467788888888875522100
Q ss_pred HHHHHHH---HHHHHHHHHccccCcCCCCCHHHHHHHHhhccccC
Q 046240 716 AAKEQCV---LSIFSLAMECTMELPEKRINAKCCNFVLCEQFVSN 757 (763)
Q Consensus 716 ~~~~~~~---~~l~~l~~~cl~~~P~~Rps~~~v~~~L~~~~~~~ 757 (763)
...+..- +.-.+ -.. ...+..|++.++|++.-...+.++
T Consensus 162 ~~DeG~~~~~eg~~d-~~~--~~~~~~~~sl~~Vi~~C~~hl~~p 203 (229)
T 2yle_A 162 SNDEGYEAAEEGLGD-EDE--KRKISAIRSYRDVMKLCAAHLPTE 203 (229)
T ss_dssp ------------------C--CSCCCCCCSHHHHHHHHHTTSSSG
T ss_pred ccccccccccccccc-ccc--cccccCcCCHHHHHHHHHhhccCc
Confidence 0000000 00000 000 234667777888877777666654
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.30 E-value=0.01 Score=62.15 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=27.7
Q ss_pred CCeEeCCCCCCCEEecCCCcEEEeeecCcee
Q 046240 594 TPIIHCDLKSSNVLLDEDMIAHLSDFGIAKL 624 (763)
Q Consensus 594 ~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 624 (763)
..++|+|+.+.||++++++.+.+.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999888899999988765
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.00 E-value=0.024 Score=60.32 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=80.1
Q ss_pred ceecccCCceEEEEEecC--------CceEEEEEeehhhHH------------------HHHHHHHHHHHHHhCC-CCcc
Q 046240 481 NLIGIGSFGYVYKAELDD--------GIEVAIKVFHQECAR------------------AMKSFEVECEVMKNIR-HRNL 533 (763)
Q Consensus 481 ~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~-h~ni 533 (763)
+.+..|-...+|+....+ +..|.+++.-..... ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 455557777899887753 367888876432210 0112234888888874 4445
Q ss_pred ceEEeeeecCCceEEEEEccCCCChhhh-----------------hccC----CCCCCHH--HHHHHHHHHH--------
Q 046240 534 VKIISGCSNDDFKALVLEYMPNGSLDIF-----------------LYSS----TCMLDIF--QRLNIMIDVA-------- 582 (763)
Q Consensus 534 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-----------------l~~~----~~~~~~~--~~~~i~~~ia-------- 582 (763)
.++++++..+ +|+||++|.+|..- ++.. .....|. ...++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6777776532 89999997655221 0111 1112211 2222222211
Q ss_pred --------------HHHH----HHHh-cCCCCeEeCCCCCCCEEecCC------CcEEEeeecCcee
Q 046240 583 --------------SALE----YLNF-RHTTPIIHCDLKSSNVLLDED------MIAHLSDFGIAKL 624 (763)
Q Consensus 583 --------------~~L~----~Lh~-~h~~~ivH~dlk~~NIll~~~------~~~kl~Dfgla~~ 624 (763)
+-+. ++.. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 2211 133458999999999999876 7899999988754
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.17 E-value=0.029 Score=60.26 Aligned_cols=74 Identities=12% Similarity=0.195 Sum_probs=47.6
Q ss_pred CceecccCCceEEEEEecC--------CceEEEEEeehhhHHHHHHHHHHHHHHHhCC-CCccceEEeeeecCCceEEEE
Q 046240 480 DNLIGIGSFGYVYKAELDD--------GIEVAIKVFHQECARAMKSFEVECEVMKNIR-HRNLVKIISGCSNDDFKALVL 550 (763)
Q Consensus 480 ~~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 550 (763)
.+.+..|-...+|+....+ ++.+++|+..... ...-+..+|..+++.+. +.-..++++.+. -++|+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3456667788999997763 5789999865332 11122356888888774 333445565432 36899
Q ss_pred EccCCCCh
Q 046240 551 EYMPNGSL 558 (763)
Q Consensus 551 e~~~~g~L 558 (763)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.11 E-value=0.38 Score=51.27 Aligned_cols=29 Identities=31% Similarity=0.425 Sum_probs=24.7
Q ss_pred eEeCCCCCCCEEe------cCCCcEEEeeecCcee
Q 046240 596 IIHCDLKSSNVLL------DEDMIAHLSDFGIAKL 624 (763)
Q Consensus 596 ivH~dlk~~NIll------~~~~~~kl~Dfgla~~ 624 (763)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998764
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=82.61 E-value=5.5 Score=37.76 Aligned_cols=120 Identities=13% Similarity=0.146 Sum_probs=78.6
Q ss_pred CCCccceEEeeeecCCceEEEEEccCCCChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEEe
Q 046240 529 RHRNLVKIISGCSNDDFKALVLEYMPNGSLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVLL 608 (763)
Q Consensus 529 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIll 608 (763)
.||+++.. ..-.+.+...+.++.-+ ....+-.-. ..+...+++++..|+....++ ..-+|--+.|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~ik--~~~~~eKlr~l~ni~~l~~~~-----~~r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNIK--SFTKNEKLRYLLNIKNLEEVN-----RTRYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGGG--GSCHHHHHHHHHHGGGGGGGG-----GSSEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHHH--hcCHHHHHHHHHHHHHHHHHh-----cCceEEEEecceEEE
Confidence 58888866 45555666555555433 222222211 267788999999888876544 234677899999999
Q ss_pred cCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhhh
Q 046240 609 DEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMFA 682 (763)
Q Consensus 609 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~~ 682 (763)
+.++.+++.-.|+-..+. |. ..++..=.-.+=|++..+++++..|+....
T Consensus 113 ~~~~~p~i~~RGik~~l~-------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~ 162 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVVD-------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDALVE 162 (215)
T ss_dssp CTTSCEEESCCEETTTBS-------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred cCCCCEEEEEccCccCCC-------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHc
Confidence 999999998777643322 21 112222344677889999999999876543
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=71.70 E-value=12 Score=35.59 Aligned_cols=118 Identities=9% Similarity=0.128 Sum_probs=76.4
Q ss_pred CCCccceEEeeeecCCceEEEEEccCCC-ChhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEeCCCCCCCEE
Q 046240 529 RHRNLVKIISGCSNDDFKALVLEYMPNG-SLDIFLYSSTCMLDIFQRLNIMIDVASALEYLNFRHTTPIIHCDLKSSNVL 607 (763)
Q Consensus 529 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~ia~~L~~Lh~~h~~~ivH~dlk~~NIl 607 (763)
.||.+ -...-.+++...+.++.-+++ ++. .+. ..+...+++++..++.... .|...-+|--+.|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~----~~~~~eKlrll~nl~~L~~----~~~~~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR----KTTLLSRIRAAIHLVSKVK----HHSARRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH----TSCHHHHHHHHHHHHHHHS----SCCSSSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH----hcCHHHHHHHHHHHHHHHH----HhhhCceeEEEeCceEE
Confidence 57877 344446666766666654333 233 222 3677888888888776554 23345678889999999
Q ss_pred ecCCCcEEEeeecCceecCCCCCccccccccccccccCccccCCCCCCcchhHHHHHHHHHHHHcCCCCCchhh
Q 046240 608 LDEDMIAHLSDFGIAKLLSGEDQSMTQTQTLATIGYMAPEYGIERKVSTRSDIYSYGIMLIETFTRKKPADKMF 681 (763)
Q Consensus 608 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slGv~l~elltg~~p~~~~~ 681 (763)
+|.++.+++.-.|+-..+ +|.- .++.-=.-.+=|++..++.++..|+...
T Consensus 117 f~~~~~p~i~hRGi~~~l-------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~l~ 166 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL-------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDEYL 166 (219)
T ss_dssp ECTTCCEEESCCEETTTB-------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHHHH
T ss_pred EeCCCcEEEEEcCCcccC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 999999999987764322 2221 1222223466788888999988887643
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.14 E-value=0.63 Score=50.55 Aligned_cols=59 Identities=12% Similarity=0.052 Sum_probs=16.7
Q ss_pred cCceecccCCceEEEEEecC-CceEEE------EEeehhh--HHHHHHHHHHHHHHHhCCCCccceEEeee
Q 046240 479 RDNLIGIGSFGYVYKAELDD-GIEVAI------KVFHQEC--ARAMKSFEVECEVMKNIRHRNLVKIISGC 540 (763)
Q Consensus 479 ~~~~lg~G~~g~v~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 540 (763)
..+.+| ||.||+|.+.. ..+||| |..+... .+....+.+|..+++..+|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 345666 99999997764 367888 7665432 22335677888888889999999988765
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=55.12 E-value=31 Score=28.09 Aligned_cols=43 Identities=12% Similarity=0.148 Sum_probs=19.0
Q ss_pred ccccccccCCCccEEEcccccccccCCCcccCCCCCCeeeecCc
Q 046240 123 LPSRIDLALPNVKALSLAYNRFSGTIQSPITNASKLTILELGGN 166 (763)
Q Consensus 123 lp~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L~~N 166 (763)
|....|.+..+|+.+.|..+ ++.+...+|.++.+|+.+.+.+.
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 33333334444444444332 23344445555555555555443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.21 E-value=22 Score=29.03 Aligned_cols=45 Identities=22% Similarity=0.169 Sum_probs=22.7
Q ss_pred ccccCCcccCCCcCccEEEccCccccCcccccccccccccEEeCcC
Q 046240 297 FSGDIPATIGGLKDVQNISLPYNRLEGPIPESFGYLTSLEILDLSN 342 (763)
Q Consensus 297 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 342 (763)
++.+...+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455555555555555543 3324444555555555555544
No 453
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.13 E-value=4.4e+02 Score=29.04 Aligned_cols=82 Identities=12% Similarity=0.098 Sum_probs=47.7
Q ss_pred ceEEeeeecCCceEEEEEccCCCChhhhhccCC-----------C-----CCCHHHHHHHHHHHH--HHHHHHHhcCCCC
Q 046240 534 VKIISGCSNDDFKALVLEYMPNGSLDIFLYSST-----------C-----MLDIFQRLNIMIDVA--SALEYLNFRHTTP 595 (763)
Q Consensus 534 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~-----~~~~~~~~~i~~~ia--~~L~~Lh~~h~~~ 595 (763)
++.|.+.......-+ .|++++.++.+.+...+ . ...+..+..++...| ..+.|+ -+
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YI---LG-- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYI---LG-- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHH---HT--
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhhee---ee--
Confidence 445555555555444 47777655554443211 0 012333444444433 235555 22
Q ss_pred eEeCCCCCCCEEecCCCcEEEeeecCce
Q 046240 596 IIHCDLKSSNVLLDEDMIAHLSDFGIAK 623 (763)
Q Consensus 596 ivH~dlk~~NIll~~~~~~kl~Dfgla~ 623 (763)
=||=.++||+++.+|++.=+|||.+-
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 35778999999999999999999863
Done!