Query 046242
Match_columns 97
No_of_seqs 109 out of 578
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 17:40:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.2 8.4E-12 2.9E-16 89.5 5.3 70 15-86 90-162 (195)
2 1u8s_A Glycine cleavage system 99.1 3.3E-10 1.1E-14 80.2 6.6 70 15-85 90-164 (192)
3 2ko1_A CTR148A, GTP pyrophosph 98.7 7.2E-08 2.5E-12 59.3 7.2 48 18-65 5-52 (88)
4 1u8s_A Glycine cleavage system 98.6 2.5E-07 8.5E-12 65.3 8.6 65 18-87 6-70 (192)
5 1zpv_A ACT domain protein; str 98.5 9.1E-07 3.1E-11 55.1 9.4 39 18-56 5-43 (91)
6 2nyi_A Unknown protein; protei 98.4 8.4E-07 2.9E-11 63.3 8.0 69 18-87 5-73 (195)
7 2jhe_A Transcription regulator 98.1 2.1E-05 7.1E-10 52.8 8.3 58 20-84 2-59 (190)
8 2f1f_A Acetolactate synthase i 97.7 0.00016 5.5E-09 51.2 8.3 64 18-86 3-68 (164)
9 2pc6_A Probable acetolactate s 97.6 0.00037 1.3E-08 49.5 8.1 64 18-86 4-69 (165)
10 3n0v_A Formyltetrahydrofolate 97.4 0.0002 6.9E-09 54.4 5.1 47 17-65 7-53 (286)
11 3lou_A Formyltetrahydrofolate 97.3 0.00037 1.3E-08 53.2 5.3 48 16-65 8-55 (292)
12 3p96_A Phosphoserine phosphata 97.2 0.00054 1.8E-08 52.6 5.4 44 17-64 11-54 (415)
13 3nrb_A Formyltetrahydrofolate 97.1 0.00053 1.8E-08 52.1 5.1 47 17-65 6-52 (287)
14 3obi_A Formyltetrahydrofolate 97.1 0.00079 2.7E-08 51.2 5.8 47 17-65 5-51 (288)
15 1y7p_A Hypothetical protein AF 97.0 0.00096 3.3E-08 49.8 5.5 38 18-55 4-41 (223)
16 3o1l_A Formyltetrahydrofolate 97.0 0.0011 3.7E-08 50.9 5.3 48 16-65 20-67 (302)
17 2fgc_A Acetolactate synthase, 96.9 0.0048 1.7E-07 44.9 8.4 63 18-85 29-93 (193)
18 2f06_A Conserved hypothetical 95.9 0.011 3.8E-07 39.3 4.4 35 18-52 6-40 (144)
19 2f06_A Conserved hypothetical 95.6 0.033 1.1E-06 36.9 6.1 44 19-62 73-116 (144)
20 2qmx_A Prephenate dehydratase; 95.3 0.07 2.4E-06 40.5 7.7 56 17-72 199-255 (283)
21 1sc6_A PGDH, D-3-phosphoglycer 95.0 0.082 2.8E-06 41.5 7.4 48 18-65 331-378 (404)
22 1ygy_A PGDH, D-3-phosphoglycer 94.9 0.16 5.6E-06 40.8 9.1 64 15-81 451-516 (529)
23 3p96_A Phosphoserine phosphata 94.5 0.18 6.1E-06 38.4 8.2 49 16-65 99-149 (415)
24 3luy_A Probable chorismate mut 94.5 0.33 1.1E-05 37.5 9.7 55 17-73 205-264 (329)
25 3mwb_A Prephenate dehydratase; 94.4 0.15 5E-06 39.3 7.4 56 16-73 199-258 (313)
26 3mtj_A Homoserine dehydrogenas 93.7 0.067 2.3E-06 42.8 4.5 51 16-66 357-409 (444)
27 2qmw_A PDT, prephenate dehydra 93.5 0.3 1E-05 36.7 7.5 51 17-67 185-239 (267)
28 2re1_A Aspartokinase, alpha an 93.0 0.082 2.8E-06 36.2 3.5 38 15-52 22-60 (167)
29 2re1_A Aspartokinase, alpha an 92.9 0.11 3.8E-06 35.5 4.0 36 16-53 101-139 (167)
30 2dtj_A Aspartokinase; protein- 91.6 0.16 5.5E-06 35.2 3.6 45 16-64 93-140 (178)
31 2dtj_A Aspartokinase; protein- 91.5 0.42 1.4E-05 33.0 5.6 40 15-54 12-52 (178)
32 2dt9_A Aspartokinase; protein- 91.2 0.15 5.2E-06 34.7 3.1 36 15-50 13-49 (167)
33 2dt9_A Aspartokinase; protein- 89.0 0.45 1.6E-05 32.3 4.0 34 16-49 93-129 (167)
34 4go7_X Aspartokinase; transfer 87.8 0.49 1.7E-05 34.0 3.7 51 15-65 32-86 (200)
35 3k5p_A D-3-phosphoglycerate de 87.2 1.3 4.3E-05 35.2 6.0 45 16-60 341-385 (416)
36 1phz_A Protein (phenylalanine 84.0 2.4 8.3E-05 34.0 6.2 70 15-86 31-101 (429)
37 3s1t_A Aspartokinase; ACT doma 83.5 1.4 4.8E-05 30.7 4.2 52 15-66 13-68 (181)
38 3s1t_A Aspartokinase; ACT doma 78.5 1.8 6.1E-05 30.1 3.3 35 16-50 94-131 (181)
39 3dhx_A Methionine import ATP-b 73.2 14 0.00049 23.3 6.4 49 18-68 21-73 (106)
40 3ab4_A Aspartokinase; aspartat 72.4 20 0.00067 27.7 8.1 39 15-53 261-300 (421)
41 3ced_A Methionine import ATP-b 71.8 16 0.00053 22.8 7.7 48 20-68 22-72 (98)
42 3mah_A Aspartokinase; aspartat 71.2 2.4 8.3E-05 28.3 2.4 35 16-50 16-53 (157)
43 2qrr_A Methionine import ATP-b 68.8 18 0.00061 22.4 6.4 50 19-69 24-76 (101)
44 2qsw_A Methionine import ATP-b 68.0 19 0.00064 22.3 6.9 49 20-69 25-76 (100)
45 3ab4_A Aspartokinase; aspartat 61.0 7.5 0.00026 30.1 3.6 34 16-49 342-378 (421)
46 3tfg_A ALR2278 protein; heme-b 60.4 22 0.00076 24.5 5.7 63 5-70 116-185 (189)
47 3c1m_A Probable aspartokinase; 59.7 7 0.00024 30.9 3.3 48 16-65 316-366 (473)
48 1zvp_A Hypothetical protein VC 59.0 14 0.00047 24.8 4.3 33 15-47 68-103 (133)
49 2jys_A Protease/reverse transc 58.0 3.6 0.00012 27.1 1.2 37 37-73 34-73 (107)
50 2cdq_A Aspartokinase; aspartat 55.5 10 0.00036 30.5 3.7 35 15-49 338-375 (510)
51 3tvi_A Aspartokinase; structur 54.6 9.1 0.00031 30.3 3.2 46 16-65 296-344 (446)
52 3l76_A Aspartokinase; alloster 53.4 11 0.00039 30.8 3.6 32 16-47 442-474 (600)
53 1zhv_A Hypothetical protein AT 51.4 14 0.00046 24.9 3.2 31 17-47 61-94 (134)
54 1uiz_A MIF, macrophage migrati 50.5 20 0.00068 22.3 3.8 59 28-87 16-84 (115)
55 1hfo_A Migration inhibitory fa 43.6 30 0.001 21.3 3.8 59 28-87 15-83 (113)
56 3b64_A Macrophage migration in 42.1 26 0.00089 21.7 3.3 59 28-87 15-84 (112)
57 3fxd_A Protein ICMQ; helix bun 40.9 9.5 0.00033 22.6 1.0 28 69-96 3-30 (57)
58 3c1m_A Probable aspartokinase; 40.6 16 0.00056 28.8 2.6 34 16-49 402-438 (473)
59 3l76_A Aspartokinase; alloster 39.2 24 0.00083 28.8 3.5 50 16-65 268-319 (600)
60 4esb_A Transcriptional regulat 38.4 49 0.0017 20.9 4.3 63 28-91 41-106 (115)
61 1tke_A Threonyl-tRNA synthetas 36.9 37 0.0013 23.7 3.8 67 18-89 54-130 (224)
62 3f8b_A Transcriptional regulat 36.8 31 0.0011 21.8 3.1 64 28-92 46-112 (116)
63 3tvi_A Aspartokinase; structur 35.6 32 0.0011 27.2 3.5 34 17-50 373-409 (446)
64 3c2i_A Methyl-CPG-binding prot 35.5 51 0.0017 21.2 3.9 25 58-84 43-67 (97)
65 2yh5_A DAPX protein, BAMC; lip 35.5 75 0.0025 20.8 4.9 70 15-89 47-119 (127)
66 2os5_A Acemif; macrophage migr 35.5 35 0.0012 21.3 3.2 60 28-87 16-84 (119)
67 2ky8_A Methyl-CPG-binding doma 34.9 25 0.00087 21.2 2.3 18 57-74 31-48 (72)
68 4go7_X Aspartokinase; transfer 34.6 16 0.00056 25.9 1.6 33 17-49 114-149 (200)
69 4dh4_A MIF; trimer, isomerase; 32.3 39 0.0013 21.0 3.0 60 26-86 14-83 (114)
70 1t4a_A PURS; tetramer, complex 32.1 85 0.0029 18.9 6.1 61 27-96 10-75 (84)
71 3oox_A Putative 2OG-Fe(II) oxy 32.1 51 0.0018 24.2 4.0 48 27-93 18-65 (312)
72 3vxv_A Methyl-CPG-binding doma 31.6 41 0.0014 20.1 2.8 15 60-74 27-41 (69)
73 2dgb_A Hypothetical protein PU 27.7 1E+02 0.0036 18.5 4.7 65 23-96 8-76 (84)
74 3ri2_A Transcriptional regulat 26.5 88 0.003 20.1 4.0 65 28-95 51-118 (123)
75 2dnr_A Synaptojanin-1; RRM dom 25.9 68 0.0023 20.2 3.3 24 29-53 26-49 (91)
76 1d9n_A Methyl-CPG-binding prot 25.8 19 0.00065 22.0 0.6 17 58-74 30-46 (75)
77 3hhh_A Transcriptional regulat 25.6 63 0.0022 20.4 3.1 61 28-89 45-108 (116)
78 3zzm_A Bifunctional purine bio 23.9 1E+02 0.0034 25.4 4.6 28 17-47 11-38 (523)
79 2j0w_A Lysine-sensitive aspart 23.9 13 0.00045 29.3 -0.6 47 15-65 305-354 (449)
80 1gp6_A Leucoanthocyanidin diox 22.7 88 0.003 23.5 3.9 47 28-93 63-109 (356)
81 1otg_A 5-carboxymethyl-2-hydro 22.7 1.5E+02 0.0053 18.8 4.9 62 26-89 15-89 (125)
82 1qf6_A THRRS, threonyl-tRNA sy 22.3 81 0.0028 25.8 3.8 38 49-87 90-128 (642)
83 4ehi_A Bifunctional purine bio 22.2 1.1E+02 0.0039 25.1 4.6 28 17-47 25-52 (534)
84 1cf7_A Protein (transcription 21.9 32 0.0011 20.8 1.1 17 31-47 47-63 (76)
85 1ub1_A MECP2, attachment regio 20.8 75 0.0026 21.5 2.8 17 58-74 57-73 (133)
86 3l7w_A Putative uncharacterize 20.7 1.4E+02 0.0046 18.3 3.9 60 28-89 39-101 (108)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.23 E-value=8.4e-12 Score=89.50 Aligned_cols=70 Identities=16% Similarity=0.151 Sum_probs=57.6
Q ss_pred CCCeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCC--ceeEEEEEEcc-CCCCCChHHHHHHHHHHHHh
Q 046242 15 GPNRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEE--LLAKAKFHVSY-KGEAIIKPLQQVLANSLRYF 86 (97)
Q Consensus 15 ~~~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~G--era~DvFyVt~-~g~~L~~~~~~~L~~~L~~~ 86 (97)
+..+++|+|.++|||||+++|+++|.++|+||..+++.|.+ ++++|.||+.. .+.+ .+.. +.|+++|...
T Consensus 90 ~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~~l~~~ 162 (195)
T 2nyi_A 90 DTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVTALSRV 162 (195)
T ss_dssp TEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHHHHHHH
T ss_pred CCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHHHHHHH
Confidence 55689999999999999999999999999999999999999 99999999963 2333 1223 5666766643
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.05 E-value=3.3e-10 Score=80.23 Aligned_cols=70 Identities=16% Similarity=0.144 Sum_probs=52.1
Q ss_pred CCCeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCc----eeEEEEEEcc-CCCCCChHHHHHHHHHHHH
Q 046242 15 GPNRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEEL----LAKAKFHVSY-KGEAIIKPLQQVLANSLRY 85 (97)
Q Consensus 15 ~~~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Ge----ra~DvFyVt~-~g~~L~~~~~~~L~~~L~~ 85 (97)
+...++|+|.++||||+|++|+++|.++|+||..+++.|.|+ +.+|.||++. .+.+ .+...+.|+++|..
T Consensus 90 ~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~~l~~~l~~ 164 (192)
T 1u8s_A 90 HAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLMQLQEEFDA 164 (192)
T ss_dssp CSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHHHHHHHHHH
T ss_pred CCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHHHHHHHHHH
Confidence 345899999999999999999999999999999999999995 7999999963 2222 11123556666554
No 3
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.69 E-value=7.2e-08 Score=59.33 Aligned_cols=48 Identities=6% Similarity=0.189 Sum_probs=42.1
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
.+.|.|.+.||||+|++|+++|.++|++|.+.++.+.++.+...|.+.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~ 52 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIF 52 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEE
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEE
Confidence 567899999999999999999999999999999988776666666663
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.59 E-value=2.5e-07 Score=65.27 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=49.9
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHHHHHHHHHHHhc
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQQVLANSLRYFL 87 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~~~L 87 (97)
..+|.|.++||||++++|+.+|.++|+||..|++.+.+.+..=.|.|... +...+.|+++|...+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-----~~~~~~l~~~L~~~~ 70 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-----PSNITRVETTLPLLG 70 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-----HHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-----CCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999876665555555421 123456666665443
No 5
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.55 E-value=9.1e-07 Score=55.07 Aligned_cols=39 Identities=10% Similarity=0.257 Sum_probs=35.8
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCc
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEEL 56 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Ge 56 (97)
...|.|.+.||||+|++|+++|+++|+||.+....+.+.
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~ 43 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDE 43 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETT
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcC
Confidence 568999999999999999999999999999998887763
No 6
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.43 E-value=8.4e-07 Score=63.30 Aligned_cols=69 Identities=25% Similarity=0.199 Sum_probs=49.5
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHHHHHHHHHHHhc
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQQVLANSLRYFL 87 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~~~L 87 (97)
..+|.|.++|||||.+.|+.+|.++|+||..|++.|.+.+-.=.|.|...+.. .+...+.|+++|...+
T Consensus 5 ~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~~-~~~~~~~l~~~L~~~~ 73 (195)
T 2nyi_A 5 SFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAKD-GKLIQSALESALPGFQ 73 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSSS-SHHHHHHHHHHSTTCE
T ss_pred EEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCcc-chhHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999866553335555422211 1123456666665443
No 7
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.08 E-value=2.1e-05 Score=52.81 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=42.9
Q ss_pred EEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHHHHHHHHHH
Q 046242 20 LLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQQVLANSLR 84 (97)
Q Consensus 20 ~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~ 84 (97)
-|+|.|.||+|||++|+++|.+++++|.++.+.+-|. .|+.-. ....+....|...+.
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~--~~~~~~~~~L~~~l~ 59 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFA--ELEFESFSSLMAEIR 59 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEEC--CCCHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEE--eCCHHHHHHHHHHHH
Confidence 3799999999999999999999999999999988753 555422 122333445555544
No 8
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.74 E-value=0.00016 Score=51.22 Aligned_cols=64 Identities=20% Similarity=0.375 Sum_probs=46.2
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEe-cCC-ceeEEEEEEccCCCCCChHHHHHHHHHHHHh
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFD-TEE-LLAKAKFHVSYKGEAIIKPLQQVLANSLRYF 86 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~-T~G-era~DvFyVt~~g~~L~~~~~~~L~~~L~~~ 86 (97)
...|.|.+.||||+|++|+.+|++.|+||.+..+. |.. ..+.=+|-|. |. +...+.|.++|.+.
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~--~d---~~~leqI~kqL~Kl 68 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV--GD---EKVLEQIEKQLHKL 68 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE--SC---HHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe--cc---HHHHHHHHHHHcCC
Confidence 46789999999999999999999999999998886 432 2333344443 22 33456777777643
No 9
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.57 E-value=0.00037 Score=49.50 Aligned_cols=64 Identities=19% Similarity=0.348 Sum_probs=46.4
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEe-cCC-ceeEEEEEEccCCCCCChHHHHHHHHHHHHh
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFD-TEE-LLAKAKFHVSYKGEAIIKPLQQVLANSLRYF 86 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~-T~G-era~DvFyVt~~g~~L~~~~~~~L~~~L~~~ 86 (97)
+..|.|.+.||||+|++|+.+|++.|+||.+.-+. |.. ..+.=+|-|. |. +...+.|.++|.+.
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~--~d---~~~leql~kQL~Kl 69 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN--GP---DEIVEQITKQLNKL 69 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE--EC---HHHHHHHHHHHHHS
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe--cc---HHHHHHHHHHhcCC
Confidence 46789999999999999999999999999998885 443 3333344443 22 33456777777643
No 10
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.38 E-value=0.0002 Score=54.44 Aligned_cols=47 Identities=9% Similarity=0.039 Sum_probs=39.0
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 17 NRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 17 ~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
+..+|.|.++||||+.+.|++.|.++|+||....=.+ +...+.||..
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~--d~~~g~Ffmr 53 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFD--DRQSGRFFIR 53 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTTTEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeec--cCCCCeeEEE
Confidence 3578999999999999999999999999999877653 3445667774
No 11
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.26 E-value=0.00037 Score=53.18 Aligned_cols=48 Identities=17% Similarity=0.194 Sum_probs=39.5
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 16 PNRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 16 ~~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
....+|.|.++||||+.+.|++.|.++|+||....=.+ ....+.||..
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~--d~~~g~Ffmr 55 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFD--DDLSARFFVR 55 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEE--ETTTTEEEEE
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEe--cCCCCceEEE
Confidence 44678999999999999999999999999999877653 3344567774
No 12
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=97.16 E-value=0.00054 Score=52.63 Aligned_cols=44 Identities=18% Similarity=0.263 Sum_probs=38.6
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEE
Q 046242 17 NRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHV 64 (97)
Q Consensus 17 ~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyV 64 (97)
...+|.|+++||||+.+.|+..|+++|.||....=.+.++ .|+.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~----~f~~ 54 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRH----RLTL 54 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETT----EEEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECC----EeEE
Confidence 4679999999999999999999999999999998877665 4555
No 13
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.14 E-value=0.00053 Score=52.14 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=38.9
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 17 NRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 17 ~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
...+|.|.++||||+.+.|++.|.++|+||....=.+ ....+.||..
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~--d~~~g~Ffmr 52 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFN--DEDSSKFFMR 52 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTTTEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeee--cCCCCeEEEE
Confidence 4678999999999999999999999999999887642 3344578874
No 14
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.11 E-value=0.00079 Score=51.19 Aligned_cols=47 Identities=13% Similarity=0.205 Sum_probs=38.0
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 17 NRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 17 ~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
...+|.|.++||||+.+.|++.|.++|+||....=.+ ....+.||..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~--d~~~g~Ffmr 51 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYN--DTESGHFFMR 51 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEE--ETTTTEEEEE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeee--cCCCCceEEE
Confidence 3568999999999999999999999999999887642 2334567763
No 15
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=97.04 E-value=0.00096 Score=49.78 Aligned_cols=38 Identities=18% Similarity=0.110 Sum_probs=30.5
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCC
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEE 55 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~G 55 (97)
..-|+|.+.||||+|++|+++|+++++||.+....+..
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 35689999999999999999999999999999988754
No 16
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=96.95 E-value=0.0011 Score=50.91 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=39.1
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 16 PNRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 16 ~~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
....+|.|.++||||+.+.|++.|.++|+||..+.=.+. +..+.||..
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d--~~~g~FfMr 67 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSD--NLSGWFFMR 67 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEE--TTTTEEEEE
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEec--CCCCeEEEE
Confidence 446799999999999999999999999999998775532 334567764
No 17
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.94 E-value=0.0048 Score=44.95 Aligned_cols=63 Identities=13% Similarity=0.150 Sum_probs=45.2
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEe-cCCceeEEE-EEEccCCCCCChHHHHHHHHHHHH
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFD-TEELLAKAK-FHVSYKGEAIIKPLQQVLANSLRY 85 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~-T~Gera~Dv-FyVt~~g~~L~~~~~~~L~~~L~~ 85 (97)
...|.|...|+||.|++|+.+|++.|+||.+=-+. |......-+ +-|+.+ +...+.|.++|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-----e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-----DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-----TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-----HHHHHHHHHHhcC
Confidence 46899999999999999999999999999986664 555444443 333322 2244666676664
No 18
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=95.85 E-value=0.011 Score=39.27 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=31.2
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEe
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFD 52 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~ 52 (97)
...+.|.-+||||.|++|+..|.+.|+||.+--++
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~ 40 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIA 40 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence 35678888999999999999999999999987665
No 19
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=95.63 E-value=0.033 Score=36.89 Aligned_cols=44 Identities=14% Similarity=0.160 Sum_probs=33.2
Q ss_pred EEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEE
Q 046242 19 SLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKF 62 (97)
Q Consensus 19 T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvF 62 (97)
+++-+.-+|+||.|++|+++|.+.|+||.+.....-+.++.=+|
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i 116 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVI 116 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEE
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEE
Confidence 57777889999999999999999999997655442234443333
No 20
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=95.32 E-value=0.07 Score=40.49 Aligned_cols=56 Identities=11% Similarity=0.178 Sum_probs=42.3
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEE-ecCCceeEEEEEEccCCCCCC
Q 046242 17 NRSLLLVETADRPGLLVDLVKIFTVINVNVESGEF-DTEELLAKAKFHVSYKGEAII 72 (97)
Q Consensus 17 ~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI-~T~Gera~DvFyVt~~g~~L~ 72 (97)
+.|.|-+...|+||-|+++-..|..+|||+..=.= -+-+..-+=.|||+-+|+.-+
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~eg~~~d 255 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFIGHRED 255 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEESCTTS
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEecCCCc
Confidence 46777777889999999999999999999863211 233455678899987777633
No 21
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=94.96 E-value=0.082 Score=41.54 Aligned_cols=48 Identities=25% Similarity=0.378 Sum_probs=40.2
Q ss_pred eEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 18 RSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 18 ~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
...|-+.-.|+||.+.+|+.+|.++|+||..-...+-|+.|-=++-|+
T Consensus 331 ~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD 378 (404)
T 1sc6_A 331 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIE 378 (404)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEE
T ss_pred cceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcC
Confidence 344668889999999999999999999999999999888776555553
No 22
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=94.88 E-value=0.16 Score=40.83 Aligned_cols=64 Identities=16% Similarity=0.294 Sum_probs=46.6
Q ss_pred CCCeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecC--CceeEEEEEEccCCCCCChHHHHHHHH
Q 046242 15 GPNRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTE--ELLAKAKFHVSYKGEAIIKPLQQVLAN 81 (97)
Q Consensus 15 ~~~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~--Gera~DvFyVt~~g~~L~~~~~~~L~~ 81 (97)
...+..|-+.-.||||.+.+|+..|.++|+||.+-++.-. |+.+-=++-+ ..+++++..++|++
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v---d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL---DQDVPDDVRTAIAA 516 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE---SSCCCHHHHHHHHH
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE---CCCCCHHHHHHHhc
Confidence 3456778899999999999999999999999999999654 4544433333 23555655555554
No 23
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=94.54 E-value=0.18 Score=38.45 Aligned_cols=49 Identities=12% Similarity=0.129 Sum_probs=39.0
Q ss_pred CCeEEEEEEeCC-cccHHHHHHHHHHhCCeEEEEEEEecCCceeEEE-EEEc
Q 046242 16 PNRSLLLVETAD-RPGLLVDLVKIFTVINVNVESGEFDTEELLAKAK-FHVS 65 (97)
Q Consensus 16 ~~~T~ieV~a~D-RpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~Dv-FyVt 65 (97)
..+.++.+.+.| +||++++|+.++.++|+||...+--+- ....-+ |+|.
T Consensus 99 ~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~-~~~~~~~~~v~ 149 (415)
T 3p96_A 99 PSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD-YPVIGLELRVS 149 (415)
T ss_dssp CCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES-SSSEEEEEEEE
T ss_pred CCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC-CCceEEEEEee
Confidence 358899999999 999999999999999999988777662 223334 6663
No 24
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=94.52 E-value=0.33 Score=37.54 Aligned_cols=55 Identities=18% Similarity=0.287 Sum_probs=39.7
Q ss_pred CeEEEEEEeC--CcccHHHHHHHHHHhCCeEEEEEEEe---cCCceeEEEEEEccCCCCCCh
Q 046242 17 NRSLLLVETA--DRPGLLVDLVKIFTVINVNVESGEFD---TEELLAKAKFHVSYKGEAIIK 73 (97)
Q Consensus 17 ~~T~ieV~a~--DRpGLL~~I~~~~~~~~l~I~~AkI~---T~Gera~DvFyVt~~g~~L~~ 73 (97)
+.|.+-+..+ |+||-|+++-..|..+|||+. ||. +.+..-+=+|||+-+|+.-++
T Consensus 205 ~kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~~~d~ 264 (329)
T 3luy_A 205 EYESVLTLIPLVTGPGVLANLLDVFRDAGLNMT--SFISRPIKGRTGTYSFIVTLDAAPWEE 264 (329)
T ss_dssp CEEEEEEEECSCCSTTHHHHHHHHHHHTTCCEE--EEEEEEETTEEEEEEEEEEESSCTTSH
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHCCcceE--EEEeeECCCCCccEEEEEEEeCCcCCH
Confidence 3444444554 799999999999999999875 442 345556778999877876443
No 25
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=94.41 E-value=0.15 Score=39.28 Aligned_cols=56 Identities=23% Similarity=0.450 Sum_probs=41.1
Q ss_pred CCeEEEEEEeC-CcccHHHHHHHHHHhCCeEEEEEEEe---cCCceeEEEEEEccCCCCCCh
Q 046242 16 PNRSLLLVETA-DRPGLLVDLVKIFTVINVNVESGEFD---TEELLAKAKFHVSYKGEAIIK 73 (97)
Q Consensus 16 ~~~T~ieV~a~-DRpGLL~~I~~~~~~~~l~I~~AkI~---T~Gera~DvFyVt~~g~~L~~ 73 (97)
.+.|-|-+..+ |+||-|+++-..|..+|||+. ||. +-+..-+=.|||+-+|+.-++
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~~~d~ 258 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLS--RIESRPTGQYLGHYFFSIDADGHATDS 258 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTSEEEEEEEESCTTSH
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEE--EEEEeecCCCCccEEEEEEEeCCCCcH
Confidence 34788878885 999999999999999999874 442 223334557999877775333
No 26
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.74 E-value=0.067 Score=42.80 Aligned_cols=51 Identities=16% Similarity=0.225 Sum_probs=35.8
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecC--CceeEEEEEEcc
Q 046242 16 PNRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTE--ELLAKAKFHVSY 66 (97)
Q Consensus 16 ~~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~--Gera~DvFyVt~ 66 (97)
....-+.+...|+||.|++|+.+|.++|++|.+-.=.-. ++....+.++|+
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 346688899999999999999999999999988543211 111235566675
No 27
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=93.54 E-value=0.3 Score=36.71 Aligned_cols=51 Identities=27% Similarity=0.428 Sum_probs=37.9
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCeEEEEEEE-ecCCceeEEEEEEccC
Q 046242 17 NRSLLLVET---ADRPGLLVDLVKIFTVINVNVESGEF-DTEELLAKAKFHVSYK 67 (97)
Q Consensus 17 ~~T~ieV~a---~DRpGLL~~I~~~~~~~~l~I~~AkI-~T~Gera~DvFyVt~~ 67 (97)
+.|.|-+.. .|+||-|+++-..|..+|||+..=.= -+-+..-+=.|||+-+
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe
Confidence 456666777 89999999999999999999863211 2234455678999855
No 28
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=93.05 E-value=0.082 Score=36.20 Aligned_cols=38 Identities=18% Similarity=0.292 Sum_probs=32.2
Q ss_pred CCCeEEEEEEe-CCcccHHHHHHHHHHhCCeEEEEEEEe
Q 046242 15 GPNRSLLLVET-ADRPGLLVDLVKIFTVINVNVESGEFD 52 (97)
Q Consensus 15 ~~~~T~ieV~a-~DRpGLL~~I~~~~~~~~l~I~~AkI~ 52 (97)
.++.+.|.|.. +|+||.+++|..+|.++|++|..--.+
T Consensus 22 ~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s 60 (167)
T 2re1_A 22 DKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQN 60 (167)
T ss_dssp ECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC
T ss_pred cCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcC
Confidence 34678888884 999999999999999999999876543
No 29
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=92.93 E-value=0.11 Score=35.52 Aligned_cols=36 Identities=8% Similarity=0.148 Sum_probs=32.5
Q ss_pred CCeEEEEEEeCC---cccHHHHHHHHHHhCCeEEEEEEEec
Q 046242 16 PNRSLLLVETAD---RPGLLVDLVKIFTVINVNVESGEFDT 53 (97)
Q Consensus 16 ~~~T~ieV~a~D---RpGLL~~I~~~~~~~~l~I~~AkI~T 53 (97)
.+.+++.|.+.+ +||.++++..+|.+.|++|.. |+|
T Consensus 101 ~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~--ist 139 (167)
T 2re1_A 101 DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM--IST 139 (167)
T ss_dssp SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE--EEE
T ss_pred CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE--EEc
Confidence 458899999988 999999999999999999998 555
No 30
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=91.62 E-value=0.16 Score=35.16 Aligned_cols=45 Identities=20% Similarity=0.355 Sum_probs=35.3
Q ss_pred CCeEEEEEEeC---CcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEE
Q 046242 16 PNRSLLLVETA---DRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHV 64 (97)
Q Consensus 16 ~~~T~ieV~a~---DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyV 64 (97)
.+.+++.|.+. ++||.++++.++|.+.|++|.. |+|-. ..=.|.|
T Consensus 93 ~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~--istSe--~~Is~vV 140 (178)
T 2dtj_A 93 DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL--ISTSE--IRISVLI 140 (178)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE--EEEET--TEEEEEE
T ss_pred CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE--EEcCC--CeEEEEE
Confidence 45788888887 8999999999999999999988 55322 3335666
No 31
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=91.50 E-value=0.42 Score=33.02 Aligned_cols=40 Identities=13% Similarity=0.253 Sum_probs=33.5
Q ss_pred CCCeEEEEE-EeCCcccHHHHHHHHHHhCCeEEEEEEEecC
Q 046242 15 GPNRSLLLV-ETADRPGLLVDLVKIFTVINVNVESGEFDTE 54 (97)
Q Consensus 15 ~~~~T~ieV-~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~ 54 (97)
.++.+.|.| ...|+||.+++|...|.+.|++|..--.++.
T Consensus 12 ~~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~ 52 (178)
T 2dtj_A 12 DKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVS 52 (178)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCC
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 456888888 4699999999999999999999887666654
No 32
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=91.25 E-value=0.15 Score=34.74 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=30.9
Q ss_pred CCCeEEEEEEe-CCcccHHHHHHHHHHhCCeEEEEEE
Q 046242 15 GPNRSLLLVET-ADRPGLLVDLVKIFTVINVNVESGE 50 (97)
Q Consensus 15 ~~~~T~ieV~a-~DRpGLL~~I~~~~~~~~l~I~~Ak 50 (97)
.++.++|.|.. +|+||.+++|..+|.+.|++|..--
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~ 49 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMII 49 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEE
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEE
Confidence 45678888876 8999999999999999999998743
No 33
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=88.97 E-value=0.45 Score=32.33 Aligned_cols=34 Identities=12% Similarity=0.207 Sum_probs=30.2
Q ss_pred CCeEEEEEEeCC---cccHHHHHHHHHHhCCeEEEEE
Q 046242 16 PNRSLLLVETAD---RPGLLVDLVKIFTVINVNVESG 49 (97)
Q Consensus 16 ~~~T~ieV~a~D---RpGLL~~I~~~~~~~~l~I~~A 49 (97)
.+.+++.|.+.+ +||.++++..+|.+.|++|..-
T Consensus 93 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 93 PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 457889999987 9999999999999999999654
No 34
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=87.83 E-value=0.49 Score=34.01 Aligned_cols=51 Identities=14% Similarity=0.173 Sum_probs=35.7
Q ss_pred CCCeEEEEEE-eCCcccHHHHHHHHHHhCCeEEEEEEE--ecC-CceeEEEEEEc
Q 046242 15 GPNRSLLLVE-TADRPGLLVDLVKIFTVINVNVESGEF--DTE-ELLAKAKFHVS 65 (97)
Q Consensus 15 ~~~~T~ieV~-a~DRpGLL~~I~~~~~~~~l~I~~AkI--~T~-Gera~DvFyVt 65 (97)
.++.+.|.|. -+|+||.+++|-.+|.+.|++|-.=-- +.. +....-.|-+.
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~ 86 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCS 86 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEE
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecc
Confidence 3456777775 489999999999999999999987422 111 22455567664
No 35
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=87.24 E-value=1.3 Score=35.17 Aligned_cols=45 Identities=22% Similarity=0.438 Sum_probs=39.7
Q ss_pred CCeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEE
Q 046242 16 PNRSLLLVETADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKA 60 (97)
Q Consensus 16 ~~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~D 60 (97)
...+-|-+.-.|+||.|.+|..+|.++|+||..=.-.|-|+-+==
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~ 385 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYL 385 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEE
Confidence 346788889999999999999999999999999999999987633
No 36
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=84.01 E-value=2.4 Score=34.05 Aligned_cols=70 Identities=17% Similarity=0.213 Sum_probs=45.6
Q ss_pred CCCeEEEEEEeCCcccHHHHHHHHHHhCCeEEEEEEE-ecCCceeEEEEEEccCCCCCChHHHHHHHHHHHHh
Q 046242 15 GPNRSLLLVETADRPGLLVDLVKIFTVINVNVESGEF-DTEELLAKAKFHVSYKGEAIIKPLQQVLANSLRYF 86 (97)
Q Consensus 15 ~~~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~~AkI-~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~~~ 86 (97)
..+.|.|-++..|+||-|+++-.+|+.+|||+..=.= -+-+..-+=.|||+-+ +. .++..+.+.+.|...
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e-h~-~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD-KR-TKPVLGSIIKSLRND 101 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC-GG-GHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe-eC-CCHHHHHHHHHHHhh
Confidence 3457788888899999999999999999999752111 1234445678999755 33 333333333444433
No 37
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=83.45 E-value=1.4 Score=30.67 Aligned_cols=52 Identities=13% Similarity=0.198 Sum_probs=36.0
Q ss_pred CCCeEEEEEE-eCCcccHHHHHHHHHHhCCeEEEEEEEe-cC--CceeEEEEEEcc
Q 046242 15 GPNRSLLLVE-TADRPGLLVDLVKIFTVINVNVESGEFD-TE--ELLAKAKFHVSY 66 (97)
Q Consensus 15 ~~~~T~ieV~-a~DRpGLL~~I~~~~~~~~l~I~~AkI~-T~--Gera~DvFyVt~ 66 (97)
.++.+.|.|. -+|+||.+++|-.+|.+.|++|-.---+ +. .....=.|+|..
T Consensus 13 ~~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~ 68 (181)
T 3s1t_A 13 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSR 68 (181)
T ss_dssp ECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEET
T ss_pred cCCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEeh
Confidence 4456666664 4799999999999999999999654321 22 234455677753
No 38
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=78.49 E-value=1.8 Score=30.12 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=31.0
Q ss_pred CCeEEEEEEeC---CcccHHHHHHHHHHhCCeEEEEEE
Q 046242 16 PNRSLLLVETA---DRPGLLVDLVKIFTVINVNVESGE 50 (97)
Q Consensus 16 ~~~T~ieV~a~---DRpGLL~~I~~~~~~~~l~I~~Ak 50 (97)
.+.+++.|.+. ++||.++++.++|.+.|++|...-
T Consensus 94 ~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 94 DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 46888888876 899999999999999999998855
No 39
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=73.25 E-value=14 Score=23.25 Aligned_cols=49 Identities=24% Similarity=0.350 Sum_probs=37.5
Q ss_pred eEEEEEE----eCCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCC
Q 046242 18 RSLLLVE----TADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKG 68 (97)
Q Consensus 18 ~T~ieV~----a~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g 68 (97)
..++.+. ..+.| +|+++++.| ...+||-.|.|..++++..-.+.|.-.|
T Consensus 21 ~~lvrL~f~g~~~~~P-iIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l~G 73 (106)
T 3dhx_A 21 VPMLRLEFTGQSVDAP-LLSETARRF-NVNNNIISAQMDYAGGVKFGIMLTEMHG 73 (106)
T ss_dssp EEEEEEEEEEECTTCC-HHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEEES
T ss_pred ceEEEEEEcCCccChh-HHHHHHHHH-CCCEEEEEEEeEEECCeeEEEEEEEEeC
Confidence 4556554 23444 888888777 4679999999999999999999996545
No 40
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=72.44 E-value=20 Score=27.71 Aligned_cols=39 Identities=13% Similarity=0.241 Sum_probs=32.6
Q ss_pred CCCeEEEEEE-eCCcccHHHHHHHHHHhCCeEEEEEEEec
Q 046242 15 GPNRSLLLVE-TADRPGLLVDLVKIFTVINVNVESGEFDT 53 (97)
Q Consensus 15 ~~~~T~ieV~-a~DRpGLL~~I~~~~~~~~l~I~~AkI~T 53 (97)
.++.+.|.|. -.|+||.+++|-..|.+.|++|..--.+|
T Consensus 261 ~~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~ 300 (421)
T 3ab4_A 261 DKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV 300 (421)
T ss_dssp ECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECC
T ss_pred eCCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccC
Confidence 3467888888 58999999999999999999998765444
No 41
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=71.76 E-value=16 Score=22.85 Aligned_cols=48 Identities=8% Similarity=0.076 Sum_probs=37.0
Q ss_pred EEEEEeCCc---ccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCC
Q 046242 20 LLLVETADR---PGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKG 68 (97)
Q Consensus 20 ~ieV~a~DR---pGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g 68 (97)
++.|.=... ..+++++++.| ...+||-.|+|..++.+..-.+.|.-.|
T Consensus 22 lvrL~f~g~~~~~PvIs~l~~~~-~v~vnIL~g~I~~i~~~~~G~L~v~l~G 72 (98)
T 3ced_A 22 IVRLVFAGSTTTEPIVSSLSTAY-DIKINILEANIKNTKNGTVGFLVLHIPY 72 (98)
T ss_dssp EEEEEEEEESCHHHHHHHHHHHH-TCCCEEEEEEEEEETTEEEEEEEEEESC
T ss_pred EEEEEECCCccCchHHHHHHHHH-CCcEEEEEEEeEEeCCEeEEEEEEEEeC
Confidence 555554433 45677777777 4789999999999999999999997555
No 42
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=71.22 E-value=2.4 Score=28.35 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=29.2
Q ss_pred CCeEEEEEEe---CCcccHHHHHHHHHHhCCeEEEEEE
Q 046242 16 PNRSLLLVET---ADRPGLLVDLVKIFTVINVNVESGE 50 (97)
Q Consensus 16 ~~~T~ieV~a---~DRpGLL~~I~~~~~~~~l~I~~Ak 50 (97)
++.+.+.|.. +|+||.+++|-.+|.+.|+++..--
T Consensus 16 ~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~ 53 (157)
T 3mah_A 16 DGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA 53 (157)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE
T ss_pred CCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE
Confidence 4578888885 4899999999999999999986543
No 43
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=68.75 E-value=18 Score=22.38 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=39.0
Q ss_pred EEEEEEeCCc---ccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCC
Q 046242 19 SLLLVETADR---PGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGE 69 (97)
Q Consensus 19 T~ieV~a~DR---pGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~ 69 (97)
.++.|.=... ..+++++++.| ...+||-.|+|..++.+..-.+.|.-.|.
T Consensus 24 ~lv~l~f~g~~~~~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l~G~ 76 (101)
T 2qrr_A 24 PLVRMEFTGATVDAPLMSQISRKY-NIDVSILSSDLDYAGGVKFGMMVAELFGN 76 (101)
T ss_dssp EEEEEEECTTSCSSCHHHHHHHHS-CCEEEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred EEEEEEEcCCCcCchHHHHHHHHh-CCCEEEEEeeeeEcCCeeEEEEEEEEeCC
Confidence 5777776544 35778887776 47789999999999999999999964453
No 44
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=68.02 E-value=19 Score=22.27 Aligned_cols=49 Identities=12% Similarity=0.252 Sum_probs=38.3
Q ss_pred EEEEEeCC---cccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCC
Q 046242 20 LLLVETAD---RPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGE 69 (97)
Q Consensus 20 ~ieV~a~D---RpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~ 69 (97)
++.|.=.. ...+++++++.| ...+||-.|.|..++.+..-.+.|.-.|.
T Consensus 25 lv~l~f~g~~~~~pvis~l~~~~-~v~vnIl~g~i~~i~~~~~G~L~v~l~G~ 76 (100)
T 2qsw_A 25 IVRLLFHGEQAKLPIISHIVQEY-QVEVSIIQGNIQQTKQGAVGSLYIQLLGE 76 (100)
T ss_dssp EEEEEEESCSCSSCHHHHHHHHH-TCEEEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred EEEEEEcCCCcCchHHHHHHHHh-CCCEEEEEeeceEcCCeeEEEEEEEEECC
Confidence 56655443 345788888887 57899999999999999999999964453
No 45
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=60.98 E-value=7.5 Score=30.11 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=29.2
Q ss_pred CCeEEEEEEeC---CcccHHHHHHHHHHhCCeEEEEE
Q 046242 16 PNRSLLLVETA---DRPGLLVDLVKIFTVINVNVESG 49 (97)
Q Consensus 16 ~~~T~ieV~a~---DRpGLL~~I~~~~~~~~l~I~~A 49 (97)
.+..++.|.+. ++||.++++-.+|.+.|++|..-
T Consensus 342 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 342 DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp CCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE
Confidence 35677888886 79999999999999999999843
No 46
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=60.41 E-value=22 Score=24.55 Aligned_cols=63 Identities=21% Similarity=0.189 Sum_probs=42.1
Q ss_pred ccceEEEecCCCCeEEEEEEeCCcc-------cHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCC
Q 046242 5 IATHISIYDDGPNRSLLLVETADRP-------GLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEA 70 (97)
Q Consensus 5 v~~~V~~~~~~~~~T~ieV~a~DRp-------GLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~ 70 (97)
-||.+.+...+++ ++.=.....|| |||..+|+- ....+.|....... +..-.++|.|+..+..
T Consensus 116 ~~Psf~~~~~~~~-~l~l~Y~S~R~gl~~~~~Gli~~~A~~-f~~~v~i~~~~~~~-~~~~h~~f~i~~~~~~ 185 (189)
T 3tfg_A 116 RPPAFECQHTSSK-SMELHYQSTRCGLAPMVLGLLHGLGKR-FQTKVEVTQTAFRE-TGEDHDIFSIKYEDSN 185 (189)
T ss_dssp CCCEEEEEEEETT-EEEEEEECSSSSCHHHHHHHHHHHHHH-TTCEEEEEEEECTT-TTSSSEEEEEEEEC--
T ss_pred CCCeEEEEECCCC-EEEEEEECCCCCHHHHHHHHHHHHHHH-hCCCeEEEEEeccC-CCCCeEEEEEEECCCC
Confidence 4688888755433 45555677887 899999995 56677777666544 4445789999854443
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=59.75 E-value=7 Score=30.90 Aligned_cols=48 Identities=19% Similarity=0.095 Sum_probs=36.3
Q ss_pred CCeEEEEEEe---CCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 16 PNRSLLLVET---ADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 16 ~~~T~ieV~a---~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
++.++|.|.. .++||.+++|-.+|.+.|++|..--.+| ++ ..=.|.|.
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~t-se-~~Is~~V~ 366 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGS-SE-TNISLVVS 366 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECC-TT-CCEEEEEE
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecC-CC-CEEEEEEe
Confidence 4678889986 6889999999999999999998766534 23 22236664
No 48
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=58.96 E-value=14 Score=24.84 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=27.2
Q ss_pred CCCeEEEEEEe---CCcccHHHHHHHHHHhCCeEEE
Q 046242 15 GPNRSLLLVET---ADRPGLLVDLVKIFTVINVNVE 47 (97)
Q Consensus 15 ~~~~T~ieV~a---~DRpGLL~~I~~~~~~~~l~I~ 47 (97)
...|..|.|.. .|-.|+++.|+..|.+.||+|.
T Consensus 68 ~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif 103 (133)
T 1zvp_A 68 SALFSLITLTVHSSLEAVGLTAAFATKLAEHGISAN 103 (133)
T ss_dssp CSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCE
T ss_pred CCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcE
Confidence 34577787765 7999999999999999999984
No 49
>2jys_A Protease/reverse transcriptase; retroviral protease, hydrolase; NMR {Simian foamy virus type 1}
Probab=58.05 E-value=3.6 Score=27.11 Aligned_cols=37 Identities=8% Similarity=0.117 Sum_probs=29.6
Q ss_pred HHHHhCCeEEEEEEEecC-CceeEEEEEEcc--CCCCCCh
Q 046242 37 KIFTVINVNVESGEFDTE-ELLAKAKFHVSY--KGEAIIK 73 (97)
Q Consensus 37 ~~~~~~~l~I~~AkI~T~-Gera~DvFyVt~--~g~~L~~ 73 (97)
++|..-..-|...-|.|+ |++-.|+||++. +|+++..
T Consensus 34 ~~fL~~E~PI~~~~I~TIHG~k~q~vYYl~fKv~GRKvea 73 (107)
T 2jys_A 34 EAFLEDERPIQTMLIKTIHGEKQQDVYYLTFKVQGRKVEA 73 (107)
T ss_dssp GGGTTTCCCSEEEEEECSSCEEEEEEEEEEEEESSCEEEE
T ss_pred hHHhcccccccceEEEEecCceeceEEEEEEEEcCeEEEE
Confidence 456677778888899886 799999999983 6988754
No 50
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=55.45 E-value=10 Score=30.54 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=30.8
Q ss_pred CCCeEEEEEEe---CCcccHHHHHHHHHHhCCeEEEEE
Q 046242 15 GPNRSLLLVET---ADRPGLLVDLVKIFTVINVNVESG 49 (97)
Q Consensus 15 ~~~~T~ieV~a---~DRpGLL~~I~~~~~~~~l~I~~A 49 (97)
.++.++|.|.. .++||.+++|-.+|.++|++|..-
T Consensus 338 ~~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I 375 (510)
T 2cdq_A 338 KRNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV 375 (510)
T ss_dssp EEEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE
T ss_pred cCCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE
Confidence 34688999986 789999999999999999999876
No 51
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=54.58 E-value=9.1 Score=30.34 Aligned_cols=46 Identities=13% Similarity=0.246 Sum_probs=34.7
Q ss_pred CCeEEEEEEe---CCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 16 PNRSLLLVET---ADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 16 ~~~T~ieV~a---~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
++.+.|.|.. .+.||.+++|-.+|.++|+++..- ++ |+. .=.|+|.
T Consensus 296 ~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~-~~~-~is~~V~ 344 (446)
T 3tvi_A 296 KNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PS-GVD-SVSLVIE 344 (446)
T ss_dssp EEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CE-ETT-EEEEEEE
T ss_pred CCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ec-CCC-EEEEEEe
Confidence 4578899986 599999999999999999999763 32 321 2246674
No 52
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=53.43 E-value=11 Score=30.78 Aligned_cols=32 Identities=22% Similarity=0.540 Sum_probs=26.5
Q ss_pred CCeEEEEEE-eCCcccHHHHHHHHHHhCCeEEE
Q 046242 16 PNRSLLLVE-TADRPGLLVDLVKIFTVINVNVE 47 (97)
Q Consensus 16 ~~~T~ieV~-a~DRpGLL~~I~~~~~~~~l~I~ 47 (97)
.+.+.|.|. -+|+||..++|-..|.+.|+++-
T Consensus 442 ~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vD 474 (600)
T 3l76_A 442 QDQAQIAIRHVPDRPGMAAQLFTALAEANISVD 474 (600)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCcEE
Confidence 345666664 48999999999999999999984
No 53
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=51.43 E-value=14 Score=24.92 Aligned_cols=31 Identities=10% Similarity=0.274 Sum_probs=25.6
Q ss_pred CeEEEEEEeC---CcccHHHHHHHHHHhCCeEEE
Q 046242 17 NRSLLLVETA---DRPGLLVDLVKIFTVINVNVE 47 (97)
Q Consensus 17 ~~T~ieV~a~---DRpGLL~~I~~~~~~~~l~I~ 47 (97)
.|-.|.|... |-.|+++.|+..|.+.||+|.
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif 94 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIF 94 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCE
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeE
Confidence 4667776644 888999999999999999984
No 54
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=50.50 E-value=20 Score=22.27 Aligned_cols=59 Identities=20% Similarity=0.139 Sum_probs=39.0
Q ss_pred cccHHHHHHHHHHh--------CCeEEEEEEEecCCceeEEEEEEc-c-CCCCCChHHHHHHHHHHHHhc
Q 046242 28 RPGLLVDLVKIFTV--------INVNVESGEFDTEELLAKAKFHVS-Y-KGEAIIKPLQQVLANSLRYFL 87 (97)
Q Consensus 28 RpGLL~~I~~~~~~--------~~l~I~~AkI~T~Gera~DvFyVt-~-~g~~L~~~~~~~L~~~L~~~L 87 (97)
+..|+..+++++.+ .-+.++...--++|.+-++.+||+ . -| ..++++++++.++|.+.|
T Consensus 16 ~~~l~~~~~~~l~~~lgkP~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~-g~~~eqk~~l~~~i~~~l 84 (115)
T 1uiz_A 16 PDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAVCSLCSIG-KIGGPQNKSYTKLLCDIL 84 (115)
T ss_dssp CTTHHHHHHHHHHHHHTCCGGGCEEEEECSCEEEETTBCSSCEEEEEEESS-CCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcChhHEEEEEECCcceEECCCCCCeEEEEEEEec-CCCHHHHHHHHHHHHHHH
Confidence 78899999999876 345555554456777788999986 2 23 345666655555555443
No 55
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=43.62 E-value=30 Score=21.28 Aligned_cols=59 Identities=10% Similarity=0.010 Sum_probs=38.1
Q ss_pred cccHHHHHHHHHHh--------CCeEEEEEEEecCCceeEEEEEEc-c-CCCCCChHHHHHHHHHHHHhc
Q 046242 28 RPGLLVDLVKIFTV--------INVNVESGEFDTEELLAKAKFHVS-Y-KGEAIIKPLQQVLANSLRYFL 87 (97)
Q Consensus 28 RpGLL~~I~~~~~~--------~~l~I~~AkI~T~Gera~DvFyVt-~-~g~~L~~~~~~~L~~~L~~~L 87 (97)
+..|+..+++++.+ .-+.++...--.+|.+-++.+||+ . -| ..++++++++.++|.+.|
T Consensus 15 ~~~l~~~l~~~l~~~l~kPe~~~~v~~~~~~~~~~~g~~~~~~~i~i~~~~-g~~~eqk~~l~~~i~~~l 83 (113)
T 1hfo_A 15 PSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTNPAAFGTLMSIG-GIEPSRNRDHSAKLFDHL 83 (113)
T ss_dssp CTTHHHHHHHHHHHHHTCCGGGCEEEEECSCEEEETTBCSSCEEEEEEESS-SCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCChHHEEEEEeCCccEEecCCCCCeEEEEEEEec-CCCHHHHHHHHHHHHHHH
Confidence 77899999988875 235555544456777778999986 2 33 345666655555555443
No 56
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=42.06 E-value=26 Score=21.65 Aligned_cols=59 Identities=7% Similarity=-0.081 Sum_probs=37.6
Q ss_pred cccHHHHHHHHHH-h-CC-------eEEEEEEEecCCceeEEEEEEc-c-CCCCCChHHHHHHHHHHHHhc
Q 046242 28 RPGLLVDLVKIFT-V-IN-------VNVESGEFDTEELLAKAKFHVS-Y-KGEAIIKPLQQVLANSLRYFL 87 (97)
Q Consensus 28 RpGLL~~I~~~~~-~-~~-------l~I~~AkI~T~Gera~DvFyVt-~-~g~~L~~~~~~~L~~~L~~~L 87 (97)
+..|+..+++++. + +| +.++...=-++|.+-++.+||+ . -| ..++++++++.++|.+.|
T Consensus 15 ~~~l~~~~~~~l~~~~~gkPe~~~~v~~~~~~~~~~~G~~~~~~~i~i~~~~-g~~~eqk~~l~~~i~~~l 84 (112)
T 3b64_A 15 KRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVACVRVEALG-GYGPSEPEKVTSIVTAAI 84 (112)
T ss_dssp HHHHHHHHHHHHHHHTSCSCGGGCEEEEECSCCCCBTTBCSSCEEEEEECTT-CCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHEEEEEeCCceEEECCCCCCEEEEEEEEcC-CCCHHHHHHHHHHHHHHH
Confidence 6789999999998 3 23 4555555567777779999986 2 23 345555555555444433
No 57
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=40.91 E-value=9.5 Score=22.59 Aligned_cols=28 Identities=4% Similarity=0.176 Sum_probs=21.5
Q ss_pred CCCChHHHHHHHHHHHHhcCCCCccccC
Q 046242 69 EAIIKPLQQVLANSLRYFLRRPTTEEAS 96 (97)
Q Consensus 69 ~~L~~~~~~~L~~~L~~~L~~~~~~~~~ 96 (97)
..|++++.+++.++|-++|..+.-|+..
T Consensus 3 d~lt~eq~~aILkaLdeaIe~GPWe~SN 30 (57)
T 3fxd_A 3 DQLSDEQKETILKALNDAIEKGPWDKSN 30 (57)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHSCTTSCH
T ss_pred chhhHHHHHHHHHHHHHHHHcCCchHHH
Confidence 3577777789999999999887766644
No 58
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=40.57 E-value=16 Score=28.77 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=28.8
Q ss_pred CCeEEEEEEeC---CcccHHHHHHHHHHhCCeEEEEE
Q 046242 16 PNRSLLLVETA---DRPGLLVDLVKIFTVINVNVESG 49 (97)
Q Consensus 16 ~~~T~ieV~a~---DRpGLL~~I~~~~~~~~l~I~~A 49 (97)
.+..++.|.+. ++||.++++-.+|.+.|++|+.-
T Consensus 402 ~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi 438 (473)
T 3c1m_A 402 KDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI 438 (473)
T ss_dssp EEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE
T ss_pred CCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE
Confidence 35778888886 49999999999999999999543
No 59
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=39.19 E-value=24 Score=28.81 Aligned_cols=50 Identities=16% Similarity=0.221 Sum_probs=34.6
Q ss_pred CCeEEEEEEe-CCcccHHHHHHHHHHhCCeEEEEEEEe-cCCceeEEEEEEc
Q 046242 16 PNRSLLLVET-ADRPGLLVDLVKIFTVINVNVESGEFD-TEELLAKAKFHVS 65 (97)
Q Consensus 16 ~~~T~ieV~a-~DRpGLL~~I~~~~~~~~l~I~~AkI~-T~Gera~DvFyVt 65 (97)
++.++|.|.. +|+||.+++|-..|.++++++-.---+ ..+....=.|+|.
T Consensus 268 ~~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~ 319 (600)
T 3l76_A 268 ADQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVV 319 (600)
T ss_dssp CCCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEEC
T ss_pred CCEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEe
Confidence 3456666654 689999999999999999999543211 1244455567774
No 60
>4esb_A Transcriptional regulator, PADR family; DNA binding protein, HTH fold; 2.50A {Bacillus cereus}
Probab=38.41 E-value=49 Score=20.87 Aligned_cols=63 Identities=10% Similarity=0.134 Sum_probs=41.3
Q ss_pred cccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHH---HHHHHHHHHHhcCCCC
Q 046242 28 RPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPL---QQVLANSLRYFLRRPT 91 (97)
Q Consensus 28 RpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~---~~~L~~~L~~~L~~~~ 91 (97)
-+|-||.+-+-|.+.|+--..-. ...+.+..=+|.+|+.|...-... -+.+.+.+...+....
T Consensus 41 s~gtlY~~L~rLe~~GlI~~~~~-~~~~g~~rk~Y~LT~~G~~~l~~~~~~~~~~~~~i~~il~~~~ 106 (115)
T 4esb_A 41 SEGSIYPLLLRMQKEKLIEGTLK-ASSLGPKRKYYHITDKGLEQLEEFKQSWGMVSTTVNNLLQGES 106 (115)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEE-ECTTSCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred CcChHHHHHHHHHHCCCeEEEee-ecCCCCCcEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 47899999999999998544333 233445555677898877655432 2566677667665543
No 61
>1tke_A Threonyl-tRNA synthetase; ligase; 1.46A {Escherichia coli} SCOP: d.15.10.1 d.67.1.1 PDB: 1tje_A 1tkg_A* 1tky_A*
Probab=36.89 E-value=37 Score=23.73 Aligned_cols=67 Identities=12% Similarity=0.104 Sum_probs=42.4
Q ss_pred eEEEEEEeCCcc-cHHH-------HHHHHHHhC-CeEEEEEEEecCCceeEEEEEEc-cCCCCCChHHHHHHHHHHHHhc
Q 046242 18 RSLLLVETADRP-GLLV-------DLVKIFTVI-NVNVESGEFDTEELLAKAKFHVS-YKGEAIIKPLQQVLANSLRYFL 87 (97)
Q Consensus 18 ~T~ieV~a~DRp-GLL~-------~I~~~~~~~-~l~I~~AkI~T~Gera~DvFyVt-~~g~~L~~~~~~~L~~~L~~~L 87 (97)
-..||+.+.+.+ |+-. =++.++.+. + .+++ +.|.-.+|-||.+ ..+.++++++.+++.+...+.+
T Consensus 54 ~~~ve~it~~~~~g~~~~~HS~~HlL~~A~~~~~~----~~~~-~~g~~~~~g~y~d~~~~~~~t~edl~~IE~~m~~iI 128 (224)
T 1tke_A 54 DAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWP----HTKM-AIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELA 128 (224)
T ss_dssp CEEEEEECTTSHHHHHHHHHHHHHHHHHHHHHHST----TCEE-CCCCEETTEEEEEEECSSCCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCchhHHHHHHHHHHHHHHHHHHHHCC----CcEE-EECCccCCeEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 356788888776 4322 234444433 1 1333 4577778889997 4477899887777777776666
Q ss_pred CC
Q 046242 88 RR 89 (97)
Q Consensus 88 ~~ 89 (97)
..
T Consensus 129 ~~ 130 (224)
T 1tke_A 129 EK 130 (224)
T ss_dssp TT
T ss_pred hC
Confidence 54
No 62
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=36.75 E-value=31 Score=21.78 Aligned_cols=64 Identities=5% Similarity=-0.029 Sum_probs=38.7
Q ss_pred cccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHH---HHHHHHHHHhcCCCCc
Q 046242 28 RPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQ---QVLANSLRYFLRRPTT 92 (97)
Q Consensus 28 RpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~---~~L~~~L~~~L~~~~~ 92 (97)
-+|-||.+-+-|.+.|+--....-. .+.+-.-.|.+|+.|...-.... +.+.+.+...+....+
T Consensus 46 ~~gtly~~L~rLe~~GlI~~~~~~~-~~~~~rk~Y~LT~~G~~~l~~~~~~~~~~~~~i~~il~~~~~ 112 (116)
T 3f8b_A 46 NEATLYTIFKRLEKDGIISSYWGDE-SQGGRRKYYRLTEIGHENMRLAFESWSRVDKIIENLEANKKS 112 (116)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEEC-----CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred CcchHHHHHHHHHHCCCEEEEeecc-CCCCCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 4789999999999999854433222 23344556778888776554322 5566666677665444
No 63
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=35.62 E-value=32 Score=27.20 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=29.5
Q ss_pred CeEEEEEEeC---CcccHHHHHHHHHHhCCeEEEEEE
Q 046242 17 NRSLLLVETA---DRPGLLVDLVKIFTVINVNVESGE 50 (97)
Q Consensus 17 ~~T~ieV~a~---DRpGLL~~I~~~~~~~~l~I~~Ak 50 (97)
+..++.|... .+||..+++-.+|.+.|++|+.--
T Consensus 373 ~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 373 NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 5778888876 589999999999999999998754
No 64
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=35.48 E-value=51 Score=21.16 Aligned_cols=25 Identities=12% Similarity=0.102 Sum_probs=17.6
Q ss_pred eEEEEEEccCCCCCChHHHHHHHHHHH
Q 046242 58 AKAKFHVSYKGEAIIKPLQQVLANSLR 84 (97)
Q Consensus 58 a~DvFyVt~~g~~L~~~~~~~L~~~L~ 84 (97)
--|+||++..|.++-.. .+|..-|.
T Consensus 43 k~DvYY~sP~GkkfRSk--~ev~ryL~ 67 (97)
T 3c2i_A 43 KYDVYLINPQGKAFRSK--VELIMYFE 67 (97)
T ss_dssp CEEEEEECTTSCEECSH--HHHHHHHH
T ss_pred cceEEEECCCCCEEECH--HHHHHHHH
Confidence 36999999999998864 23444443
No 65
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=35.48 E-value=75 Score=20.83 Aligned_cols=70 Identities=6% Similarity=0.043 Sum_probs=40.2
Q ss_pred CCCeEEEEEEeCCcccHHHHHHHH---HHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHHHHHHHHHHHhcCC
Q 046242 15 GPNRSLLLVETADRPGLLVDLVKI---FTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQQVLANSLRYFLRR 89 (97)
Q Consensus 15 ~~~~T~ieV~a~DRpGLL~~I~~~---~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~~~L~~ 89 (97)
+.....+.-..+| +|+..+++.- +....+.|. +...|++ .-+-+.+.+|+|++.+..+.|-..|.+.|+.
T Consensus 47 s~G~y~V~Y~~~~-~gf~~~lg~~~~~~~~~~Y~i~---v~~~g~~-t~V~v~d~~G~p~~~~~a~~ll~~L~~~l~~ 119 (127)
T 2yh5_A 47 SQGNMAVTYKPLS-DSDWQELGASDPGLASGDYKLQ---VGDLDNR-SSLQFIDPKGHTLTQSQNDALVAVFQAAFSK 119 (127)
T ss_dssp GGTEEEEEECCCC-HHHHHHHTSCCCCCCSEEEEEE---EEEETTE-EEEEEECTTSCBCCHHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEEeCCCC-cchHHHhcCCCccCCCCCEEEE---EEeCCCc-eEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4444444444444 6888887310 111223333 3445666 3555556779999988777777777776654
No 66
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=35.45 E-value=35 Score=21.33 Aligned_cols=60 Identities=10% Similarity=-0.001 Sum_probs=37.2
Q ss_pred cccHHHHHHHHHHhC--------CeEEEEEEEecCCceeEEEEEEc-cCCCCCChHHHHHHHHHHHHhc
Q 046242 28 RPGLLVDLVKIFTVI--------NVNVESGEFDTEELLAKAKFHVS-YKGEAIIKPLQQVLANSLRYFL 87 (97)
Q Consensus 28 RpGLL~~I~~~~~~~--------~l~I~~AkI~T~Gera~DvFyVt-~~g~~L~~~~~~~L~~~L~~~L 87 (97)
+..|+..+++++.+. -+.++...--.+|.+-++.+||+ .--...+++++++|.++|.+.|
T Consensus 16 ~~~l~~~~~~~l~~~lgkP~~~~~v~~~~~~~~~~~g~~~~~~~i~I~~~~g~~~eqk~~l~~~i~~~l 84 (119)
T 2os5_A 16 PANFEERLTDLLAESMNKPRNRIAIEVLAGQRITHGASRNPVAVIKVESIGALSADDNIRHTQKITQFC 84 (119)
T ss_dssp CTTHHHHHHHHHHHHHTCCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcChHHEEEEEECCccEEEcCCCCCeEEEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 788999999988753 34444443445666668999996 2222345666655555555443
No 67
>2ky8_A Methyl-CPG-binding domain protein 2; DNA binding domain, transcription-DNA complex; HET: DNA 5CM TED; NMR {Gallus gallus}
Probab=34.94 E-value=25 Score=21.19 Aligned_cols=18 Identities=11% Similarity=0.021 Sum_probs=14.7
Q ss_pred eeEEEEEEccCCCCCChH
Q 046242 57 LAKAKFHVSYKGEAIIKP 74 (97)
Q Consensus 57 ra~DvFyVt~~g~~L~~~ 74 (97)
.--|+||+++.|.++-.-
T Consensus 31 ~k~DvyY~sP~Gkr~RS~ 48 (72)
T 2ky8_A 31 GKSDVYYFSPSGKKFRSK 48 (72)
T ss_dssp TCEEEEEECTTCCEEESH
T ss_pred CceEEEEECCCCCEeEcH
Confidence 457999999999998753
No 68
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=34.55 E-value=16 Score=25.92 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=26.9
Q ss_pred CeEEEEEEe---CCcccHHHHHHHHHHhCCeEEEEE
Q 046242 17 NRSLLLVET---ADRPGLLVDLVKIFTVINVNVESG 49 (97)
Q Consensus 17 ~~T~ieV~a---~DRpGLL~~I~~~~~~~~l~I~~A 49 (97)
+...+.|.. ..+||..+++-.+|.+.|+||..-
T Consensus 114 ~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mI 149 (200)
T 4go7_X 114 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELI 149 (200)
T ss_dssp CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEE
Confidence 345555554 579999999999999999999875
No 69
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=32.30 E-value=39 Score=21.01 Aligned_cols=60 Identities=17% Similarity=0.007 Sum_probs=39.6
Q ss_pred CCcccHHHHHHHHHHhC--------CeEEEEEEEecCCceeEEEEEEc-c-CCCCCChHHHHHHHHHHHHh
Q 046242 26 ADRPGLLVDLVKIFTVI--------NVNVESGEFDTEELLAKAKFHVS-Y-KGEAIIKPLQQVLANSLRYF 86 (97)
Q Consensus 26 ~DRpGLL~~I~~~~~~~--------~l~I~~AkI~T~Gera~DvFyVt-~-~g~~L~~~~~~~L~~~L~~~ 86 (97)
.++.+||.++++++++. -+.++...--++|..-+..+|++ . -| .+++++.+++.++|.+.
T Consensus 14 ~~~~~l~~~ls~~~a~~lgKPe~~v~V~~~~~~~m~fgGs~~p~a~v~i~~ig-~~~~e~~~~l~~~i~~~ 83 (114)
T 4dh4_A 14 AQQDALLKDAEKAVADALGKPLSYVMVGYSQTGQMRFGGSSDPCAFIRVASIG-GITSSTNCKIAAALSAA 83 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEEECSCCCBTTBCSCCEEEEEEEES-CCCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHCCChHHEEEEEeCCceEEECCcCCCeEEEEEEEEc-CCCHHHHHHHHHHHHHH
Confidence 45678999999888753 35555555568888889999996 3 25 36666555544444433
No 70
>1t4a_A PURS; tetramer, complex formyl glycinamide synthetase, FGAR, structural protein; 2.00A {Bacillus subtilis} SCOP: d.284.1.1 PDB: 1twj_A
Probab=32.12 E-value=85 Score=18.92 Aligned_cols=61 Identities=8% Similarity=0.122 Sum_probs=36.5
Q ss_pred CcccHH----HHHHHHHHhCCe-EEEEEEEecCCceeEEEEEEccCCCCCChHHHHHHHHHHHHhcCCCCccccC
Q 046242 27 DRPGLL----VDLVKIFTVINV-NVESGEFDTEELLAKAKFHVSYKGEAIIKPLQQVLANSLRYFLRRPTTEEAS 96 (97)
Q Consensus 27 DRpGLL----~~I~~~~~~~~l-~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~~~L~~~~~~~~~ 96 (97)
-+||.| ..|.+++..+|+ ++...|+ -..|.++-++. .++..+.+..--...|..|+.|..+
T Consensus 10 lK~gVlDpqG~av~~al~~LG~~~v~~VR~-------gK~~~l~~~~~--~~~a~~~v~~~~~~LLaNpVie~y~ 75 (84)
T 1t4a_A 10 LKESVLDPQGSAVQHALHSMTYNEVQDVRI-------GKYMELTIEKS--DRDLDVLVKEMCEKLLANTVIEDYR 75 (84)
T ss_dssp ECTTSCCHHHHHHHHHHHHTTCTTEEEEEE-------EEEEEEEECCC--SSCHHHHHHHHHHHTTCCTTTEEEE
T ss_pred ECCCCcCcHHHHHHHHHHHcCCCChhheEE-------EEEEEEEecCc--hHHHHHHHHHHHHHhcCCCcceEEE
Confidence 345555 366778999999 6888775 34577754442 2222223333333458888888654
No 71
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=32.10 E-value=51 Score=24.20 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=34.6
Q ss_pred CcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHHHHHHHHHHHhcCCCCcc
Q 046242 27 DRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQQVLANSLRYFLRRPTTE 93 (97)
Q Consensus 27 DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~~~L~~~~~~ 93 (97)
+|..+..+|.+++.+.|. |||.+.| ++.+..+.+.+..++.-+.+..|
T Consensus 18 ~~~~~~~~l~~A~~~~GF-----------------f~v~nHG--i~~~~~~~~~~~~~~fF~lP~e~ 65 (312)
T 3oox_A 18 DFTRFAQELGASFERYGF-----------------AVLSDYD--LDQARIDAAVDSAKAFFALPVET 65 (312)
T ss_dssp CHHHHHHHHHHHHHHHSE-----------------EEEESCC--SCHHHHHHHHHHHHHHHTSCHHH
T ss_pred cHHHHHHHHHHHHHhCcE-----------------EEEECCC--CCHHHHHHHHHHHHHHHCCCHHH
Confidence 678899999999999986 8997655 44655566666666666665443
No 72
>3vxv_A Methyl-CPG-binding domain protein 4; methyl CPG binding domain, protein-DNA complex, versatIle BA recognition, hydrolase-DNA complex; HET: DNA 5CM; 2.00A {Mus musculus} PDB: 3vxx_A* 3vyb_A* 3vyq_A*
Probab=31.59 E-value=41 Score=20.11 Aligned_cols=15 Identities=13% Similarity=0.184 Sum_probs=13.3
Q ss_pred EEEEEccCCCCCChH
Q 046242 60 AKFHVSYKGEAIIKP 74 (97)
Q Consensus 60 DvFyVt~~g~~L~~~ 74 (97)
|+||++..|.++-..
T Consensus 27 DvyY~sP~Gkk~RSk 41 (69)
T 3vxv_A 27 DVYFISPQGLKFRSK 41 (69)
T ss_dssp EEEEECTTSCEECSH
T ss_pred eEEEEcCCCCEeeCH
Confidence 999999999998864
No 73
>2dgb_A Hypothetical protein PURS; purine, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Thermus thermophilus} PDB: 2cuw_A
Probab=27.68 E-value=1e+02 Score=18.51 Aligned_cols=65 Identities=12% Similarity=0.141 Sum_probs=38.1
Q ss_pred EEeCCcccHH----HHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHHHHHHHHHHHhcCCCCccccC
Q 046242 23 VETADRPGLL----VDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQQVLANSLRYFLRRPTTEEAS 96 (97)
Q Consensus 23 V~a~DRpGLL----~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~~~L~~~~~~~~~ 96 (97)
|.-.-+||.| ..|.+++..+|+++...|+ -..|.++.++.. .+...+.+...- +.|..++.|..+
T Consensus 8 V~V~lK~gVlDpqG~av~~al~~LG~~v~~VR~-------gK~~~l~~~~~~-~~~a~~~v~~~~-~LLaNpVie~y~ 76 (84)
T 2dgb_A 8 LLIELKKGILDPQGRAVEGVLKDLGHPVEEVRV-------GKVLEIVFPAEN-LLEAEEKAKAMG-ALLANPVMEVYA 76 (84)
T ss_dssp EEEEECTTSCCHHHHHHHHHHHHTTCCCSEEEE-------EEEEEEEEECSS-HHHHHHHHHHHH-HHHSCTTTEEEE
T ss_pred EEEEECCCCcChHHHHHHHHHHHCCCChhhEEE-------EEEEEEEecCCC-HHHHHHHHHHHH-HHhCCccceEEE
Confidence 3333456655 3667789999998766664 456777643221 122233344444 578898888654
No 74
>3ri2_A Transcriptional regulator, PADR-like family; PSI-biology, midwest center for structural genomics, MCSG, transcription regulator; 2.10A {Eggerthella lenta} PDB: 4ejo_A
Probab=26.55 E-value=88 Score=20.09 Aligned_cols=65 Identities=11% Similarity=0.180 Sum_probs=40.6
Q ss_pred cccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHH---HHHHHHHHHHhcCCCCcccc
Q 046242 28 RPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPL---QQVLANSLRYFLRRPTTEEA 95 (97)
Q Consensus 28 RpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~---~~~L~~~L~~~L~~~~~~~~ 95 (97)
.||-||.+-+-|.+.|+--..- ...-| +..=+|-+|+.|...-... -+.+.+.+...+.. ..|++
T Consensus 51 s~gtlY~~L~rLe~~GlI~~~~-~~~~~-~~rk~Y~LT~~Gr~~l~~~~~~~~~~~~~i~~il~~-~~~~~ 118 (123)
T 3ri2_A 51 EANTLYPLMRRLESQGLLASEW-DNGGS-KPRKYYRTTDEGLRVLREVEAQWHVLCDGVGKLLET-NGEDR 118 (123)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEE-EECSS-CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTC-C----
T ss_pred CcchHHHHHHHHHHCCCEEEEe-ccCCC-CCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCchh
Confidence 4899999999999999854332 22233 5666677898877654432 25666776666655 34444
No 75
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.93 E-value=68 Score=20.19 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=21.8
Q ss_pred ccHHHHHHHHHHhCCeEEEEEEEec
Q 046242 29 PGLLVDLVKIFTVINVNVESGEFDT 53 (97)
Q Consensus 29 pGLL~~I~~~~~~~~l~I~~AkI~T 53 (97)
+-|...+-+.|.++| .|.++||.+
T Consensus 26 ~~l~~~L~~~F~~~G-~Vi~vr~~~ 49 (91)
T 2dnr_A 26 DALIDELLQQFASFG-EVILIRFVE 49 (91)
T ss_dssp HHHHHHHHHHHHTTC-CEEEEEECS
T ss_pred HHHHHHHHHHHHhCC-CeEEEEEec
Confidence 468999999999999 899999977
No 76
>1d9n_A Methyl-CPG-binding protein MBD1; PCM1, methylation, DNA binding domain, gene regulation; NMR {Homo sapiens} SCOP: d.10.1.3 PDB: 1ig4_A*
Probab=25.76 E-value=19 Score=22.02 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=14.4
Q ss_pred eEEEEEEccCCCCCChH
Q 046242 58 AKAKFHVSYKGEAIIKP 74 (97)
Q Consensus 58 a~DvFyVt~~g~~L~~~ 74 (97)
-.|+||++..|.++-..
T Consensus 30 k~DvyY~sP~Gkk~RS~ 46 (75)
T 1d9n_A 30 RSDTYYQSPTGDRIRSK 46 (75)
T ss_dssp CCCEEEECSSSCEECST
T ss_pred ceEEEEECCCCCeeecH
Confidence 57999999999998753
No 77
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=25.61 E-value=63 Score=20.44 Aligned_cols=61 Identities=10% Similarity=0.120 Sum_probs=37.8
Q ss_pred cccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHH---HHHHHHHHHhcCC
Q 046242 28 RPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQ---QVLANSLRYFLRR 89 (97)
Q Consensus 28 RpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~---~~L~~~L~~~L~~ 89 (97)
.+|-||.+-+-|.+.|+--..- ..+.+.+..=.|.+|+.|...-.+.. +.+.+.+...+..
T Consensus 45 s~gtlY~~L~rLe~~GlI~~~~-~~~~~g~~rk~Y~lT~~G~~~l~~~~~~~~~~~~~i~~il~~ 108 (116)
T 3hhh_A 45 VEGTVYTILLRLEKNQWVIAEK-KPSEKGPMRKFYRLTSSGEAELADFWQRWTLLSKQVNKMKKN 108 (116)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEE-EECC--CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHCCCEEEEe-eecCCCCCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 4789999999999999854433 32334455556778887775443322 4555555555544
No 78
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=23.90 E-value=1e+02 Score=25.39 Aligned_cols=28 Identities=32% Similarity=0.544 Sum_probs=23.8
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCeEEE
Q 046242 17 NRSLLLVETADRPGLLVDLVKIFTVINVNVE 47 (97)
Q Consensus 17 ~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~ 47 (97)
.+-+|.| .|++||+ .+++.|.++|+.|.
T Consensus 11 ~~aLISV--sDK~glv-elAk~L~~lGfeI~ 38 (523)
T 3zzm_A 11 RRALISV--YDKTGLV-DLAQGLSAAGVEII 38 (523)
T ss_dssp CEEEEEE--SSCTTHH-HHHHHHHHTTCEEE
T ss_pred cEEEEEE--eccccHH-HHHHHHHHCCCEEE
Confidence 4567777 7999966 89999999999986
No 79
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=23.87 E-value=13 Score=29.30 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=35.0
Q ss_pred CCCeEEEEEEe---CCcccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEc
Q 046242 15 GPNRSLLLVET---ADRPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVS 65 (97)
Q Consensus 15 ~~~~T~ieV~a---~DRpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt 65 (97)
.++.++|.|.. .+.||.+++|-.+|.++|+++..-- | ++ ..=.|+|.
T Consensus 305 ~~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--s-s~-~sis~~v~ 354 (449)
T 2j0w_A 305 RRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--T-SE-VSVALTLD 354 (449)
T ss_dssp EEEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--E-ET-TEEEEEEC
T ss_pred eCCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--e-CC-CeEEEEEe
Confidence 34678888887 4789999999999999999987644 3 22 22247775
No 80
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=22.73 E-value=88 Score=23.50 Aligned_cols=47 Identities=21% Similarity=0.214 Sum_probs=33.2
Q ss_pred cccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHHHHHHHHHHHHhcCCCCcc
Q 046242 28 RPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPLQQVLANSLRYFLRRPTTE 93 (97)
Q Consensus 28 RpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~~~~L~~~L~~~L~~~~~~ 93 (97)
|.-+..+|.+++.+.|. |||.+.| +..+..+.+.+..++.-+.+..|
T Consensus 63 ~~~~~~~l~~A~~~~GF-----------------F~v~nHG--i~~~l~~~~~~~~~~FF~lP~ee 109 (356)
T 1gp6_A 63 RENCIEELKKASLDWGV-----------------MHLINHG--IPADLMERVKKAGEEFFSLSVEE 109 (356)
T ss_dssp HHHHHHHHHHHHHHTSE-----------------EEEESCS--CCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHhCCE-----------------EEEeCCC--CCHHHHHHHHHHHHHHHCCCHHH
Confidence 34488999999999996 8886555 55665666666666666665444
No 81
>1otg_A 5-carboxymethyl-2-hydroxymuconate isomerase; 2.10A {Escherichia coli} SCOP: d.80.1.2
Probab=22.71 E-value=1.5e+02 Score=18.79 Aligned_cols=62 Identities=19% Similarity=0.182 Sum_probs=36.9
Q ss_pred CCcccHHHHHHHHHHhCCe------EEEEEEEec--CCc-eeE-EEEEEc---cCCCCCChHHHHHHHHHHHHhcCC
Q 046242 26 ADRPGLLVDLVKIFTVINV------NVESGEFDT--EEL-LAK-AKFHVS---YKGEAIIKPLQQVLANSLRYFLRR 89 (97)
Q Consensus 26 ~DRpGLL~~I~~~~~~~~l------~I~~AkI~T--~Ge-ra~-DvFyVt---~~g~~L~~~~~~~L~~~L~~~L~~ 89 (97)
.|+++|+..|-+++.+.++ ..+.-+..+ +|+ +.+ +.-+|+ ..|+ +++++++|.++|.++|..
T Consensus 15 ~~~~~L~~~lh~~l~~~~~fp~~~ik~Ra~~~~~~~vg~~~~~~~fvhi~i~i~~GR--s~eqK~~L~~~v~~~l~~ 89 (125)
T 1otg_A 15 ADLPGLFAKVNPTLAATGIFPLAGIRSRVHWVDTWQMADGQHDYAFVHMTLKIGAGR--SLESRQQAGEMLFELIKT 89 (125)
T ss_dssp HTHHHHHHHHHHHHHTTSSSCGGGCEEEEEEESSEEETTSCSCEEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCCcCceEeeEEcccEEEcCCCCCcceEEEEEEECCCC--CHHHHHHHHHHHHHHHHH
Confidence 4889999999999888772 222222221 232 332 233445 2477 577777777777666543
No 82
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=22.26 E-value=81 Score=25.80 Aligned_cols=38 Identities=5% Similarity=0.025 Sum_probs=27.2
Q ss_pred EEEecCCceeEEEEEEc-cCCCCCChHHHHHHHHHHHHhc
Q 046242 49 GEFDTEELLAKAKFHVS-YKGEAIIKPLQQVLANSLRYFL 87 (97)
Q Consensus 49 AkI~T~Gera~DvFyVt-~~g~~L~~~~~~~L~~~L~~~L 87 (97)
|++ |.|.-++|-||.+ ..+.++++++.++|.+...+.+
T Consensus 90 ~~~-~~G~~i~~gfy~Df~~~~~~t~edl~~IE~~m~~iI 128 (642)
T 1qf6_A 90 TKM-AIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELA 128 (642)
T ss_dssp CEE-CCCCEETTEEEEEEECSSCCCHHHHHHHHHHHHHHH
T ss_pred cEE-EECCccCCeeEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 455 8999889999997 4477999886666665544433
No 83
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=22.16 E-value=1.1e+02 Score=25.15 Aligned_cols=28 Identities=25% Similarity=0.456 Sum_probs=23.7
Q ss_pred CeEEEEEEeCCcccHHHHHHHHHHhCCeEEE
Q 046242 17 NRSLLLVETADRPGLLVDLVKIFTVINVNVE 47 (97)
Q Consensus 17 ~~T~ieV~a~DRpGLL~~I~~~~~~~~l~I~ 47 (97)
.+.+|.| .|++||+ .+++.|.++|+.|.
T Consensus 25 ~raLISV--~DK~glv-~~Ak~L~~lGfeI~ 52 (534)
T 4ehi_A 25 MRALLSV--SDKEGIV-EFGKELENLGFEIL 52 (534)
T ss_dssp CEEEEEE--SSCTTHH-HHHHHHHHTTCEEE
T ss_pred cEEEEEE--cccccHH-HHHHHHHHCCCEEE
Confidence 4567777 7999966 89999999999986
No 84
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=21.93 E-value=32 Score=20.84 Aligned_cols=17 Identities=12% Similarity=0.241 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhCCeEEE
Q 046242 31 LLVDLVKIFTVINVNVE 47 (97)
Q Consensus 31 LL~~I~~~~~~~~l~I~ 47 (97)
=+|||.++|...|+--.
T Consensus 47 RiYDI~NVLe~igli~K 63 (76)
T 1cf7_A 47 RIYDITNVLEGIGLIEK 63 (76)
T ss_dssp HHHHHHHHHHHHTSEEE
T ss_pred ehhhHHHHHhHhcceee
Confidence 38999999999998544
No 85
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=20.80 E-value=75 Score=21.55 Aligned_cols=17 Identities=12% Similarity=0.186 Sum_probs=14.4
Q ss_pred eEEEEEEccCCCCCChH
Q 046242 58 AKAKFHVSYKGEAIIKP 74 (97)
Q Consensus 58 a~DvFyVt~~g~~L~~~ 74 (97)
-.|+||++..|.++-..
T Consensus 57 k~DVYY~SP~GKkfRSk 73 (133)
T 1ub1_A 57 KYDVYLINPQGKAFRSK 73 (133)
T ss_dssp SEEEEEECTTSCEESSH
T ss_pred ceeEEEECCCCCeeeCH
Confidence 48999999889998764
No 86
>3l7w_A Putative uncharacterized protein SMU.1704; PADR, transcriptional factor, transcription; HET: MSE; 2.20A {Streptococcus mutans} SCOP: a.4.5.0
Probab=20.72 E-value=1.4e+02 Score=18.25 Aligned_cols=60 Identities=12% Similarity=0.121 Sum_probs=39.5
Q ss_pred cccHHHHHHHHHHhCCeEEEEEEEecCCceeEEEEEEccCCCCCChHH---HHHHHHHHHHhcCC
Q 046242 28 RPGLLVDLVKIFTVINVNVESGEFDTEELLAKAKFHVSYKGEAIIKPL---QQVLANSLRYFLRR 89 (97)
Q Consensus 28 RpGLL~~I~~~~~~~~l~I~~AkI~T~Gera~DvFyVt~~g~~L~~~~---~~~L~~~L~~~L~~ 89 (97)
.+|-||.+-+.|.+.|+--.... .. +.+..=.|.+|+.|...-... -+.+.+.+...+..
T Consensus 39 ~~~tly~~L~~Le~~GlI~~~~~-~~-~~r~r~~y~LT~~G~~~l~~~~~~~~~~~~~i~~~l~~ 101 (108)
T 3l7w_A 39 KESTLYPILKKLEKAGYLSTYTQ-EH-QGRRRKYYHLTDSGEKHLVYLTKEWSVYKMTIDGIVEG 101 (108)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEE-EE-TTEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcChHHHHHHHHHHCCCeEEEee-cC-CCCcceEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 47889999999999999655433 23 445555677888777654432 25556666665544
Done!