BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046251
MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEES
MDSELAKLDFACKE

High Scoring Gene Products

Symbol, full name Information P value
AT1G17010 protein from Arabidopsis thaliana 7.6e-11
SRG1
senescence-related gene 1
protein from Arabidopsis thaliana 1.5e-09
AT4G25300 protein from Arabidopsis thaliana 1.9e-09
AT4G25310 protein from Arabidopsis thaliana 4.1e-09
AT1G78550 protein from Arabidopsis thaliana 1.4e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046251
        (74 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2020422 - symbol:AT1G17010 species:3702 "Arabi...   157  7.6e-11   1
TAIR|locus:2020407 - symbol:SRG1 "senescence-related gene...   145  1.5e-09   1
TAIR|locus:2122669 - symbol:AT4G25300 species:3702 "Arabi...   144  1.9e-09   1
TAIR|locus:2122679 - symbol:AT4G25310 species:3702 "Arabi...   141  4.1e-09   1
TAIR|locus:2202980 - symbol:AT1G78550 species:3702 "Arabi...   127  1.4e-07   1


>TAIR|locus:2020422 [details] [associations]
            symbol:AT1G17010 species:3702 "Arabidopsis thaliana"
            [GO:0005506 "iron ion binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009813 "flavonoid biosynthetic
            process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
            evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
            paired donors, with incorporation or reduction of molecular oxygen,
            2-oxoglutarate as one donor, and incorporation of one atom each of
            oxygen into both donors" evidence=IEA;ISS] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0009686
            "gibberellin biosynthetic process" evidence=RCA] [GO:0009740
            "gibberellic acid mediated signaling pathway" evidence=RCA]
            InterPro:IPR002283 InterPro:IPR005123 Pfam:PF03171 PRINTS:PR00682
            PROSITE:PS51471 EMBL:CP002684 GO:GO:0005506 GO:GO:0016706
            InterPro:IPR026992 Pfam:PF14226 IPI:IPI00535751 RefSeq:NP_173144.1
            UniGene:At.41857 ProteinModelPortal:F4I629 SMR:F4I629
            EnsemblPlants:AT1G17010.1 GeneID:838271 KEGG:ath:AT1G17010
            OMA:PWSSILV Uniprot:F4I629
        Length = 361

 Score = 157 (60.3 bits), Expect = 7.6e-11, P = 7.6e-11
 Identities = 36/71 (50%), Positives = 43/71 (60%)

Query:     7 SLLVPCVQEWVKNPMLV-VPPRYIRPDEDSP--LNSDDTLISQIPIIDMQXXXXXXXXXX 63
             S+LVP VQE VK+ M+  VPPRY+R D+D    +  D  LIS+IPIIDM           
Sbjct:    11 SILVPSVQEMVKDKMITTVPPRYVRYDQDKTEVVVHDSGLISEIPIIDMNRLCSSTAVDS 70

Query:    64 XXAKLDFACKE 74
                KLDFACKE
Sbjct:    71 EVEKLDFACKE 81


>TAIR|locus:2020407 [details] [associations]
            symbol:SRG1 "senescence-related gene 1" species:3702
            "Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0009813 "flavonoid biosynthetic process" evidence=ISS]
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016706
            "oxidoreductase activity, acting on paired donors, with
            incorporation or reduction of molecular oxygen, 2-oxoglutarate as
            one donor, and incorporation of one atom each of oxygen into both
            donors" evidence=IEA;ISS] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] [GO:0009737 "response to abscisic acid stimulus"
            evidence=RCA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=RCA] [GO:0009830 "cell wall modification
            involved in abscission" evidence=RCA] [GO:0009845 "seed
            germination" evidence=RCA] [GO:0010162 "seed dormancy process"
            evidence=RCA] [GO:0010260 "organ senescence" evidence=IEP;RCA]
            [GO:0016682 "oxidoreductase activity, acting on diphenols and
            related substances as donors, oxygen as acceptor" evidence=ISS]
            InterPro:IPR005123 Pfam:PF03171 PROSITE:PS51471 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0046872 eggNOG:COG3491
            HOGENOM:HOG000276735 GO:GO:0016706 InterPro:IPR026992 Pfam:PF14226
            HSSP:Q96323 GO:GO:0016682 EMBL:AC007651 GO:GO:0010260 EMBL:X79052
            EMBL:AY048302 EMBL:AY139794 IPI:IPI00545969 PIR:S44261
            RefSeq:NP_173145.1 UniGene:At.21208 ProteinModelPortal:Q39224
            SMR:Q39224 STRING:Q39224 PaxDb:Q39224 PRIDE:Q39224
            EnsemblPlants:AT1G17020.1 GeneID:838272 KEGG:ath:AT1G17020
            TAIR:At1g17020 InParanoid:Q39224 OMA:ILIAKMA PhylomeDB:Q39224
            ProtClustDB:PLN02216 Genevestigator:Q39224 Uniprot:Q39224
        Length = 358

 Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 33/70 (47%), Positives = 40/70 (57%)

Query:     7 SLLVPCVQEWVKNPMLV-VPPRYIRPDEDSPLNSDDTLIS-QIPIIDMQXXXXXXXXXXX 64
             S+LVP VQE VK   +  VPPRY+R D+D     DD  +  +IPIIDM+           
Sbjct:    11 SILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSE 70

Query:    65 XAKLDFACKE 74
               KLDFACKE
Sbjct:    71 VEKLDFACKE 80


>TAIR|locus:2122669 [details] [associations]
            symbol:AT4G25300 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0009813 "flavonoid
            biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
            acting on paired donors, with incorporation or reduction of
            molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
            one atom each of oxygen into both donors" evidence=IEA;ISS]
            [GO:0055114 "oxidation-reduction process" evidence=IEA]
            InterPro:IPR005123 Pfam:PF03171 PROSITE:PS51471 EMBL:CP002687
            EMBL:AL161563 GO:GO:0016706 InterPro:IPR026992 Pfam:PF14226
            HSSP:Q96323 EMBL:AL035396 ProtClustDB:PLN02216 IPI:IPI00548837
            PIR:T05551 RefSeq:NP_194260.1 UniGene:At.27751
            ProteinModelPortal:Q9SB33 SMR:Q9SB33 PRIDE:Q9SB33
            EnsemblPlants:AT4G25300.1 GeneID:828633 KEGG:ath:AT4G25300
            TAIR:At4g25300 InParanoid:Q9SB33 OMA:WADMFFL PhylomeDB:Q9SB33
            ArrayExpress:Q9SB33 Genevestigator:Q9SB33 Uniprot:Q9SB33
        Length = 356

 Score = 144 (55.7 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 33/70 (47%), Positives = 41/70 (58%)

Query:     7 SLLVPCVQEWVKNPMLV-VPPRYIRPDED-SPLNSDDTLISQIPIIDMQXXXXXXXXXXX 64
             S++VP VQE VK  M+  VPPRY+R D+D + +  D  L +QIPIIDM            
Sbjct:    10 SIIVPSVQEMVKEKMITTVPPRYVRSDQDVAEIAVDSGLRNQIPIIDMSLLCSSTSMDSE 69

Query:    65 XAKLDFACKE 74
               KLD ACKE
Sbjct:    70 IDKLDSACKE 79


>TAIR|locus:2122679 [details] [associations]
            symbol:AT4G25310 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0009813 "flavonoid
            biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
            acting on paired donors, with incorporation or reduction of
            molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
            one atom each of oxygen into both donors" evidence=IEA;ISS]
            [GO:0055114 "oxidation-reduction process" evidence=IEA]
            InterPro:IPR005123 Pfam:PF03171 PROSITE:PS51471 EMBL:CP002687
            GenomeReviews:CT486007_GR EMBL:AL161563 eggNOG:COG3491
            HOGENOM:HOG000276735 GO:GO:0016706 InterPro:IPR026992 Pfam:PF14226
            HSSP:Q96323 EMBL:AL035396 ProtClustDB:PLN02216 EMBL:BT011229
            EMBL:BT012157 IPI:IPI00530814 PIR:T05552 RefSeq:NP_194261.1
            UniGene:At.32271 ProteinModelPortal:Q9SB32 SMR:Q9SB32 PaxDb:Q9SB32
            PRIDE:Q9SB32 EnsemblPlants:AT4G25310.1 GeneID:828634
            KEGG:ath:AT4G25310 TAIR:At4g25310 InParanoid:Q9SB32 OMA:FTHSELE
            PhylomeDB:Q9SB32 ArrayExpress:Q9SB32 Genevestigator:Q9SB32
            Uniprot:Q9SB32
        Length = 353

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 31/70 (44%), Positives = 42/70 (60%)

Query:     7 SLLVPCVQEWVKNPML--VVPPRYIRPDEDSPLNSDDTLISQIPIIDMQXXXXXXXXXXX 64
             S++VP VQE VK  ++  V+PPRY+R D++    + D+  +QIPIIDM            
Sbjct:    10 SVIVPSVQEMVKEKVITTVLPPRYVRSDQEKGEAAIDSGENQIPIIDMSLLSSSTSMDSE 69

Query:    65 XAKLDFACKE 74
               KLDFACKE
Sbjct:    70 IDKLDFACKE 79


>TAIR|locus:2202980 [details] [associations]
            symbol:AT1G78550 species:3702 "Arabidopsis thaliana"
            [GO:0005506 "iron ion binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0016491 "oxidoreductase activity"
            evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
            paired donors, with incorporation or reduction of molecular oxygen,
            2-oxoglutarate as one donor, and incorporation of one atom each of
            oxygen into both donors" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] InterPro:IPR002283
            InterPro:IPR005123 Pfam:PF03171 PRINTS:PR00682 PROSITE:PS51471
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005506
            eggNOG:COG3491 HOGENOM:HOG000276735 GO:GO:0016706
            InterPro:IPR026992 Pfam:PF14226 HSSP:Q96323 EMBL:AC007260
            ProtClustDB:PLN02216 EMBL:AF360338 EMBL:AY051076 IPI:IPI00531067
            PIR:A96814 RefSeq:NP_177976.1 UniGene:At.19032
            ProteinModelPortal:Q9SYM7 SMR:Q9SYM7 PaxDb:Q9SYM7 PRIDE:Q9SYM7
            EnsemblPlants:AT1G78550.1 GeneID:844191 KEGG:ath:AT1G78550
            TAIR:At1g78550 InParanoid:Q9SYM7 OMA:VSAMDSE PhylomeDB:Q9SYM7
            ArrayExpress:Q9SYM7 Genevestigator:Q9SYM7 Uniprot:Q9SYM7
        Length = 356

 Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 28/70 (40%), Positives = 41/70 (58%)

Query:     7 SLLVPCVQEWVKNP-MLVVPPRYIRPDED-SPLNSDDTLISQIPIIDMQXXXXXXXXXXX 64
             SL+VP V E VK      +PPRY+R D++ + + +D +L S+IP+IDM            
Sbjct:    11 SLIVPFVLEIVKEKNFTTIPPRYVRVDQEKTEILNDSSLSSEIPVIDMTRLCSVSAMDSE 70

Query:    65 XAKLDFACKE 74
               KLDFAC++
Sbjct:    71 LKKLDFACQD 80


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.139   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       74        62   0.00091  102 3  11 22  0.41    28
                                                     29  0.41    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  521 (55 KB)
  Total size of DFA:  98 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.22u 0.13s 7.35t   Elapsed:  00:00:00
  Total cpu time:  7.22u 0.13s 7.35t   Elapsed:  00:00:00
  Start:  Sat May 11 03:18:31 2013   End:  Sat May 11 03:18:31 2013

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