Query 046254
Match_columns 321
No_of_seqs 126 out of 1174
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 17:50:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046254.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046254hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.4E-55 4.9E-60 415.1 23.7 298 4-321 18-391 (413)
2 2apr_A Rhizopuspepsin; hydrola 100.0 6.1E-53 2.1E-57 386.3 24.5 278 3-321 12-316 (325)
3 3aup_A SBG7S, BG, basic 7S glo 100.0 1.4E-52 4.7E-57 394.6 23.7 296 4-321 19-378 (403)
4 3c9x_A Trichoderma reesei aspa 100.0 1.4E-52 4.9E-57 384.4 21.9 279 3-321 12-322 (329)
5 3psg_A Pepsinogen; hydrolase(a 100.0 2.3E-52 8E-57 388.4 23.6 280 3-321 53-362 (370)
6 1oew_A Endothiapepsin; hydrola 100.0 2.8E-52 9.7E-57 382.4 22.2 278 3-321 12-322 (329)
7 2x0b_A Renin; hydrolase-hormon 100.0 4.4E-52 1.5E-56 387.6 21.2 278 4-321 59-375 (383)
8 3cms_A Chymosin B; hydrolase, 100.0 2.1E-51 7.2E-56 375.8 23.5 274 4-321 12-315 (323)
9 1dpj_A Proteinase A; proteinas 100.0 3.2E-51 1.1E-55 375.6 24.1 278 4-321 11-321 (329)
10 4aa9_A Chymosin; hydrolase, as 100.0 1.1E-51 3.8E-56 377.2 20.4 277 3-321 8-312 (320)
11 1htr_B Gastricsin; aspartyl pr 100.0 3.6E-51 1.2E-55 375.2 23.1 279 3-321 9-321 (329)
12 1tzs_A Cathepsin E; hydrolase, 100.0 3.7E-51 1.3E-55 378.3 22.8 279 4-321 21-334 (351)
13 1am5_A Pepsin, acid proteinase 100.0 2.5E-51 8.5E-56 375.5 20.8 276 4-321 10-316 (324)
14 1j71_A Candidapepsin, aspartic 100.0 7.1E-51 2.4E-55 373.9 22.7 270 3-321 9-316 (334)
15 2qzx_A Candidapepsin-5; aspart 100.0 1.4E-50 4.7E-55 373.2 19.4 273 3-321 9-323 (342)
16 1izd_A Aspartic proteinase; su 100.0 1.1E-49 3.9E-54 364.2 22.5 275 3-321 12-315 (323)
17 1ibq_A Aspergillopepsin; aspar 100.0 1.2E-49 4.1E-54 364.4 22.6 275 3-321 11-317 (325)
18 3fv3_A SAPP1P-secreted asparti 100.0 1.2E-49 4.2E-54 366.5 22.6 272 2-321 8-321 (339)
19 3k1w_A Renin; protease, altern 100.0 7E-50 2.4E-54 368.3 20.7 278 4-321 16-332 (341)
20 1miq_A Plasmepsin; aspartic pr 100.0 8.7E-50 3E-54 371.8 21.4 275 4-321 60-366 (375)
21 1yg9_A Aspartic protease BLA G 100.0 1.3E-49 4.6E-54 364.8 22.3 276 4-321 15-321 (330)
22 1mpp_A Pepsin; hydrolase(acid 100.0 1.2E-49 4E-54 369.6 21.6 276 4-321 16-347 (361)
23 2bju_A Plasmepsin II; aspartic 100.0 7.7E-50 2.6E-54 378.7 20.4 279 4-321 136-442 (453)
24 3pvk_A Candidapepsin-2; hydrol 100.0 1.5E-49 5E-54 366.3 19.9 272 2-321 8-323 (342)
25 1bxo_A Protein (penicillopepsi 100.0 1.7E-49 5.8E-54 363.1 19.3 275 3-321 12-315 (323)
26 1qdm_A Prophytepsin; aspartic 100.0 1.3E-48 4.5E-53 373.6 24.8 292 4-321 50-470 (478)
27 3qvc_A Histo-aspartic protease 100.0 6.3E-49 2.2E-53 372.7 22.2 275 4-321 135-441 (451)
28 2ewy_A Beta-secretase 2; BACE2 100.0 4.9E-48 1.7E-52 361.4 25.4 286 5-321 12-347 (383)
29 2qp8_A Beta-secretase 1; BACE1 100.0 2.3E-47 8E-52 358.2 26.3 286 5-321 20-359 (395)
30 1t6e_X Xylanase inhibitor; two 100.0 6.1E-48 2.1E-52 360.4 21.6 288 3-321 11-365 (381)
31 3vf3_A Beta-secretase 1; struc 100.0 5.4E-47 1.9E-51 356.5 27.6 286 5-321 27-366 (402)
32 3lpj_A Beta-secretase 1; alzhe 100.0 1.4E-46 4.7E-51 358.9 27.3 286 5-321 73-412 (455)
33 1wkr_A Polyporopepsin; hydrola 100.0 4.8E-46 1.7E-50 342.6 20.2 267 4-321 10-325 (340)
34 1b5f_A Protein (cardosin A); h 100.0 3.9E-39 1.3E-43 282.1 18.0 200 3-228 10-237 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 2.2E-29 7.7E-34 220.4 16.9 198 111-321 3-233 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 3.6E-24 1.2E-28 160.0 9.4 82 3-103 10-95 (97)
37 1b5f_B Protein (cardosin A); h 99.3 5.2E-13 1.8E-17 97.4 3.8 72 246-321 4-79 (87)
38 2i1a_A DNA damage-inducible pr 84.6 0.91 3.1E-05 35.2 4.1 33 2-36 21-53 (148)
39 3s8i_A Protein DDI1 homolog 1; 82.5 1.2 4.2E-05 34.7 4.0 34 2-37 19-52 (148)
40 3liy_A Protease; hydrolase, hy 81.7 1.4 4.6E-05 32.7 3.6 31 9-39 12-45 (116)
41 2hs1_A HIV-1 protease; ultra-h 79.8 2.5 8.7E-05 30.5 4.5 27 9-37 10-36 (99)
42 1fmb_A EIAV protease; hydrolas 79.6 2.1 7.1E-05 31.3 4.0 25 9-35 10-34 (104)
43 3ec0_A Protease; HIV-2, inhibi 72.2 5.4 0.00019 28.7 4.5 27 9-37 10-36 (99)
44 2hah_A Protease, retropepsin; 68.5 5.1 0.00017 29.8 3.8 23 12-36 18-40 (116)
45 3sqf_A Protease; folded monome 62.1 9 0.00031 28.3 4.0 28 9-38 11-38 (114)
46 3slz_A GAG-Pro-POL polyprotein 50.5 21 0.00073 27.0 4.6 28 8-37 23-50 (132)
47 2i1a_A DNA damage-inducible pr 46.7 10 0.00034 29.0 2.3 21 301-321 109-129 (148)
48 3s8i_A Protein DDI1 homolog 1; 44.7 9.3 0.00032 29.6 1.8 23 201-223 35-57 (148)
49 2rsp_A RSV protease; hydrolase 43.7 20 0.00068 26.9 3.4 19 19-37 30-48 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 43.4 22 0.00075 29.1 3.9 26 8-35 9-34 (203)
51 3c9x_A Trichoderma reesei aspa 42.8 23 0.00078 31.0 4.3 33 5-37 192-230 (329)
52 1bxo_A Protein (penicillopepsi 38.1 24 0.00082 30.8 3.7 33 5-37 188-224 (323)
53 1izd_A Aspartic proteinase; su 36.8 27 0.00092 30.5 3.8 33 5-37 188-225 (323)
54 1oew_A Endothiapepsin; hydrola 35.7 28 0.00094 30.5 3.7 33 5-37 191-229 (329)
55 2apr_A Rhizopuspepsin; hydrola 35.1 28 0.00096 30.3 3.6 33 5-37 192-229 (325)
56 1ibq_A Aspergillopepsin; aspar 34.4 34 0.0012 29.8 4.1 33 5-37 187-225 (325)
57 1lya_B Cathepsin D; lysosomal 32.5 39 0.0013 27.8 4.0 32 6-37 99-137 (241)
58 1yg9_A Aspartic protease BLA G 27.9 27 0.00092 30.6 2.2 32 6-37 193-230 (330)
59 1qdm_A Prophytepsin; aspartic 26.1 55 0.0019 30.4 4.1 32 6-37 231-270 (478)
60 3ka2_A [L-Ala51;Gly51']HIV-1 p 23.0 78 0.0027 25.8 3.9 25 9-35 114-138 (203)
61 2x0b_A Renin; hydrolase-hormon 20.4 71 0.0024 28.6 3.5 32 6-37 242-280 (383)
62 3k1w_A Renin; protease, altern 20.3 56 0.0019 28.4 2.8 32 6-37 199-237 (341)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.4e-55 Score=415.14 Aligned_cols=298 Identities=18% Similarity=0.234 Sum_probs=237.8
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCC-C-C---------
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKS-P-F--------- 72 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~-~-~--------- 72 (321)
.+++|+++|.||||||++.|++||||+++||+|++| .+|+||+.++|.++.|.. . +
T Consensus 18 ~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~ 84 (413)
T 3vla_A 18 STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSGSIACGDCFNGP 84 (413)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTTCCEEECCSSCC
T ss_pred CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccccccCCCcccccCC
Confidence 478999999999999999999999999999998865 379999999999988876 2 2
Q ss_pred --CCCCCCceEEEEEC-CCCceEEEEEEEEEEecCCCCCC----CccccceeEeeccccCCcccccccCcceEEeeCCCC
Q 046254 73 --HCFEGDCFYGITYG-DVYETKEVDSLDTSTLLPPDEPS----PVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDS 145 (321)
Q Consensus 73 --~c~~~~~~~~~~Y~-~g~~~~G~l~~D~v~~~~~~~~~----~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~ 145 (321)
.|.++.|.|.+.|+ +|+.+.|.|++|+|+|+ +.++. .+.++++.|||++.+.....+ ...+||||||+++
T Consensus 85 ~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~-~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~--~~~dGIlGLg~~~ 161 (413)
T 3vla_A 85 RPGCNNNTCGVFPENPVINTATGGEVAEDVVSVE-STDGSSSGRVVTVPRFIFSCAPTSLLQNLA--SGVVGMAGLGRTR 161 (413)
T ss_dssp BTTBCSSEEEECCEETTTTEECCEEEEEEEEEEE-EECSSBEEEEEEEEEEEEEEECGGGGTTSC--TTCCEEEECSSSS
T ss_pred CCCCCCCcCcceeecCcCCceeeeEEEEEEEEec-ccCCCCcccceeeCCEEEECcccccccCcc--cccccccccCCCC
Confidence 25556799999994 77779999999999998 55443 267889999999986320023 5689999999999
Q ss_pred CchHHHhhhc--cCCceEEeecCCCCCCcceEEeCCCCCC-----------cceEecCC---------------Cceeee
Q 046254 146 TSFMVQLGRL--VPDRFSCCLVQPDKSFHSRLEFGDQIIA-----------GKSLNLPP---------------NSFTIK 197 (321)
Q Consensus 146 ~s~~~ql~~~--~~~~Fs~~l~~~~~~~~g~l~~G~~d~~-----------~t~l~i~~---------------~~~~i~ 197 (321)
+|++.||..+ ++++||+||.+.. ..+|.|+||+.+.. -+++++-. ..|.++
T Consensus 162 lSl~sql~~~~~i~~~FS~cL~~~~-~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~ 240 (413)
T 3vla_A 162 IALPSQFASAFSFKRKFAMCLSGST-SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240 (413)
T ss_dssp SSHHHHHHHHHTCCSEEEEECCSCS-SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred cchHHHHhhhcCCCceEEEeCCCCC-CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence 9999999874 4689999999853 46899999999841 13444321 456653
Q ss_pred e------------c---------CCcceEEeccCceEeechHHHHHHHHHHHHHhc--cCCcccccccCCCccceEecCC
Q 046254 198 L------------N---------GQRGCINDCGSVLTVIECEVYAVLTAEFIDYFS--QHDIEKLFTCRKCGVTCFNLPA 254 (321)
Q Consensus 198 ~------------~---------~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~C~~~~~ 254 (321)
. . +..++||||||++++||+++|++|+++|.+.+. +++...... .+..||..+.
T Consensus 241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~---~~~~C~~~~~ 317 (413)
T 3vla_A 241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVA---PFGACFSTDN 317 (413)
T ss_dssp CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCT---TCSCEEECTT
T ss_pred EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCC---CCcceeccCC
Confidence 1 1 346799999999999999999999999998864 333333222 5789999864
Q ss_pred CC-----CCCCeEEEEEeC--cEEEeCCCceEEEcCCCeEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 255 RF-----NSFPSMTYHFQG--ADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 255 ~~-----~~~P~i~~~f~g--~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
.. ..+|+|+|+|+| .+|+|++++|+++..++..|++++.......+.||||++|||++|+|||++|+
T Consensus 318 ~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~ 391 (413)
T 3vla_A 318 ILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATS 391 (413)
T ss_dssp CCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTT
T ss_pred ccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCC
Confidence 31 378999999998 49999999999987667899998875212236899999999999999999984
No 2
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=6.1e-53 Score=386.27 Aligned_cols=278 Identities=17% Similarity=0.237 Sum_probs=227.6
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG 82 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~ 82 (321)
..+..|+++|.||||+|++.|++||||+++||+|+.|..| .+.++.|+|++|+||+.. .|.|.
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~----------------~~~~~ 74 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQAD----------------GRTWS 74 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEE----------------EEEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeC----------------CCEEE
Confidence 4678999999999999999999999999999999999999 777889999999999984 37999
Q ss_pred EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCC-------chHHHhhhc
Q 046254 83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDST-------SFMVQLGRL 155 (321)
Q Consensus 83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~-------s~~~ql~~~ 155 (321)
+.|++|+.++|.+++|+|+++ + +.++++.|||++...+ .|.....+||||||++.. +++.+|..+
T Consensus 75 i~Yg~Gs~~~G~~~~D~v~~g-~-----~~v~~~~fg~~~~~~~--~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~q 146 (325)
T 2apr_A 75 ISYGDGSSASGILAKDNVNLG-G-----LLIKGQTIELAKREAA--SFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQ 146 (325)
T ss_dssp EECTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEECH--HHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHT
T ss_pred EEECCCCCEEEEEEEEEEEEC-C-----EEECcEEEEEEeccCc--ccccCCCceEEEeCCcccccccCCCCHHHHHHhc
Confidence 999999989999999999999 7 8999999999998766 454445899999998765 366777654
Q ss_pred ---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC--CCceeeee----------cCCcceEEeccCceEee
Q 046254 156 ---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP--PNSFTIKL----------NGQRGCINDCGSVLTVI 215 (321)
Q Consensus 156 ---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~--~~~~~i~~----------~~~~~~iiDSGTt~~~l 215 (321)
.+++||+||.+......|.|+||++|+.+ +++++. ...|.+.. .....+||||||++++|
T Consensus 147 g~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~l 226 (325)
T 2apr_A 147 GLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLIL 226 (325)
T ss_dssp TSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEE
T ss_pred CCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCEecCCCceEEEecCCccEEC
Confidence 36899999965422468999999999753 566663 35676542 23457999999999999
Q ss_pred chHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEEEEecCC
Q 046254 216 ECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAF 295 (321)
Q Consensus 216 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~~~~~~~ 295 (321)
|+++|+++.+++.+.+.. . + ....+|+. ..+|+|+|+|+|++++||+++|++... +..|++.+..
T Consensus 227 P~~~~~~~~~~~~~~~~~---~---g--~~~~~C~~-----~~~p~i~f~f~g~~~~ip~~~~~~~~~-~~~C~~~i~~- 291 (325)
T 2apr_A 227 PNNIAASVARAYGASDNG---D---G--TYTISCDT-----SAFKPLVFSINGASFQVSPDSLVFEEF-QGQCIAGFGY- 291 (325)
T ss_dssp EHHHHHHHHHHHTCEECS---S---S--CEEECSCG-----GGCCCEEEEETTEEEEECGGGGEEEEE-TTEEEESEEE-
T ss_pred CHHHHHHHHHHHhcccCC---C---C--eEEEECCC-----CCCCcEEEEECCEEEEECHHHEEEcCC-CCeEEEEEEc-
Confidence 999999999998765421 1 1 13446763 247999999999999999999998755 5689975543
Q ss_pred CCCCCceeeechheeeeEEEEeCCCC
Q 046254 296 TPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 296 ~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
...+.+|||+.|||++|+|||++|.
T Consensus 292 -~~~~~~iLG~~fl~~~y~vfD~~~~ 316 (325)
T 2apr_A 292 -GNWGFAIIGDTFLKNNYVVFNQGVP 316 (325)
T ss_dssp -ESSSSEEECHHHHTTEEEEEETTTT
T ss_pred -CCCCCEEECHHHhcceEEEEECCCC
Confidence 1256899999999999999999974
No 3
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.4e-52 Score=394.63 Aligned_cols=296 Identities=18% Similarity=0.250 Sum_probs=227.9
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCC-C-C---------
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKS-P-F--------- 72 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~-~-~--------- 72 (321)
.++.|+++|.||||||++.|+|||||++|||+|++| .+|+||+.++|.++.|.. . +
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~ 85 (403)
T 3aup_A 19 STGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRANTHQCLSCPAAS 85 (403)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTTCCCEEECSSSC
T ss_pred CCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCccccCccccCCCC
Confidence 578999999999999999999999999999998764 479999999998877765 1 2
Q ss_pred --CCCCCCceEEEEEC-CCCceEEEEEEEEEEecCCCCCCC------ccccceeEeeccccCCccc-ccccCcceEEeeC
Q 046254 73 --HCFEGDCFYGITYG-DVYETKEVDSLDTSTLLPPDEPSP------VSVQNIRFGCSLESKDFVS-IQKKIIAGIMGLN 142 (321)
Q Consensus 73 --~c~~~~~~~~~~Y~-~g~~~~G~l~~D~v~~~~~~~~~~------~~~~~~~Fg~~~~~~~~~~-~~~~~~~GIlGLg 142 (321)
.|.++.|.|.+.|+ +|+.+.|.+++|+|+|+ +.++.. +.++++.|||++.+.. . +.....+||||||
T Consensus 86 ~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig-~~~g~~~~~~~~~~v~~~~Fg~~~~~~~--~~~~~~~~dGIlGLg 162 (403)
T 3aup_A 86 RPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIH-ATQGSTQQLGPLVTVPQFLFSCAPSFLV--QKGLPRNTQGVAGLG 162 (403)
T ss_dssp BTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEE-ECCC----CCCEEEEEEEEEEEECGGGG--SSSSSTTCCEEEECS
T ss_pred CCCCCCCcceeEeecCCCCceeeEEEEEEEEEec-ccCCccccccccccccCEEEECCccccc--ccCCCCCCceEEECC
Confidence 25456799999998 77779999999999998 654433 6788999999998743 2 2235789999999
Q ss_pred CCCCchHHHhhhc--cCCceEEeecCCCCCCcceEEeCCCCCC------------c-ceEecC---CCceeee-------
Q 046254 143 WDSTSFMVQLGRL--VPDRFSCCLVQPDKSFHSRLEFGDQIIA------------G-KSLNLP---PNSFTIK------- 197 (321)
Q Consensus 143 ~~~~s~~~ql~~~--~~~~Fs~~l~~~~~~~~g~l~~G~~d~~------------~-t~l~i~---~~~~~i~------- 197 (321)
+++++++.|+++. .+++||+||.+.. ..+|.|+||+ |+. . +++++. ...|.++
T Consensus 163 ~~~~s~~~ql~~~~~~~~~FS~~L~~~~-~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~ 240 (403)
T 3aup_A 163 HAPISLPNQLASHFGLQRQFTTCLSRYP-TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRIN 240 (403)
T ss_dssp SSTTSHHHHHHHHHTCCSEEEEECCSCT-TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEET
T ss_pred CCCcCHHHHHHhhcCCCCeEEEEcCCCC-CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEEEEC
Confidence 9999999999763 4689999998753 4689999999 531 1 344432 2456543
Q ss_pred ---e------------cCCcceEEeccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeE
Q 046254 198 ---L------------NGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSM 262 (321)
Q Consensus 198 ---~------------~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i 262 (321)
. .+..++||||||++++||+++|++|+++|.+.+..++...... ....|+.... ...+|+|
T Consensus 241 g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~---~~~~c~~c~~-~~~~P~i 316 (403)
T 3aup_A 241 QHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVA---PFGLCFNSNK-INAYPSV 316 (403)
T ss_dssp TEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCT---TCSCEECGGG-CCCCCCE
T ss_pred CEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCC---CCCceEECCC-cCcCCcE
Confidence 1 1123599999999999999999999999987654333322211 3457876432 2478999
Q ss_pred EEEEeCc---EEEeCCCceEEEcCCCeEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 263 TYHFQGA---DLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 263 ~~~f~g~---~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+|+|+|+ +|+|++++|+++..++..|+++........+.||||+.|||++|+|||++|.
T Consensus 317 ~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~ 378 (403)
T 3aup_A 317 DLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARS 378 (403)
T ss_dssp EEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTT
T ss_pred EEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCC
Confidence 9999986 9999999999987656799988876211236899999999999999999974
No 4
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.4e-52 Score=384.39 Aligned_cols=279 Identities=17% Similarity=0.235 Sum_probs=224.1
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG 82 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~ 82 (321)
..+..|+++|.||||+|++.|++||||+++||+|+.|..|..+.++.|||++|+||+.++ .|.|.
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~---------------~~~~~ 76 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVS---------------GASWS 76 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECT---------------TCBEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcC---------------CCeEE
Confidence 467899999999999999999999999999999999998877778899999999999864 37999
Q ss_pred EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCccccc-ccCcceEEeeCCCCCc---------hHHHh
Q 046254 83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQ-KKIIAGIMGLNWDSTS---------FMVQL 152 (321)
Q Consensus 83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql 152 (321)
+.|++|+.++|.+++|+|+|+ + +.++++.|||++.+.+ .+. ....+||||||++..+ ++.+|
T Consensus 77 i~Yg~Gs~~~G~~~~D~v~ig-~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 148 (329)
T 3c9x_A 77 ISYGDGSSSSGDVYTDKVTIG-G-----FSVNTQGVESATRVST--EFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNA 148 (329)
T ss_dssp EECTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEECH--HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred EEeCCCCcEEEEEEEEEEEEC-C-----EEEcceEEEEEEecCc--cccccCCCceeEEeCcccccccCCCCCCCHHHHH
Confidence 999999989999999999999 7 8999999999998765 332 2468999999987644 55666
Q ss_pred hhcc-CCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC--CCceeeee-----------cCCcceEEeccCceE
Q 046254 153 GRLV-PDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP--PNSFTIKL-----------NGQRGCINDCGSVLT 213 (321)
Q Consensus 153 ~~~~-~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~--~~~~~i~~-----------~~~~~~iiDSGTt~~ 213 (321)
..++ +++||+||.+ ...|.|+||++|+.+ +++++. ...|.++. .....+||||||+++
T Consensus 149 ~~~i~~~~FS~~l~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 225 (329)
T 3c9x_A 149 ASSLAEPLFTADLRH---GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLL 225 (329)
T ss_dssp HTTSSSSEEEEECCS---SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSE
T ss_pred HHhcCCCEEEEEecC---CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCcE
Confidence 5543 6899999987 368999999999753 466663 35676542 134569999999999
Q ss_pred eechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeEEEE-
Q 046254 214 VIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSFFFF- 290 (321)
Q Consensus 214 ~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~~- 290 (321)
+||++++++|.+++.... + ....+ ....+|+ ..+|+|+|+|+|.+++||+++|++...+ ...|++
T Consensus 226 ~lp~~~~~~i~~~i~~a~--~--~~~~~--~~~~~C~------~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~ 293 (329)
T 3c9x_A 226 LLDDNVVDAYYANVQSAQ--Y--DNQQE--GVVFDCD------EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGG 293 (329)
T ss_dssp EECHHHHHHHHTTCTTCE--E--ETTTT--EEEEETT------CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEES
T ss_pred eCCHHHHHHHHHhCCCcE--E--cCCCC--EEEEECC------CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEE
Confidence 999999999988764321 0 11101 1234565 3589999999988999999999987633 379997
Q ss_pred EecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 291 FGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 291 ~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+... ...+.||||+.|||++|+|||++|.
T Consensus 294 i~~~--~~~~~~ILG~~fl~~~y~vfD~~~~ 322 (329)
T 3c9x_A 294 LQSS--SGIGINIFGDVALKAALVVFDLGNE 322 (329)
T ss_dssp EEEC--TTTTSEEECHHHHTTEEEEEETTTT
T ss_pred EEcC--CCCCcEEEChHHhccEEEEEECCCC
Confidence 4443 2346899999999999999999974
No 5
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.3e-52 Score=388.41 Aligned_cols=280 Identities=20% Similarity=0.229 Sum_probs=221.6
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG 82 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~ 82 (321)
..+..|+++|+||||||++.|+|||||+++||+|..|..|.++.++.|||++|+||+... |.|.
T Consensus 53 ~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~----------------~~~~ 116 (370)
T 3psg_A 53 YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS----------------QELS 116 (370)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE----------------EEEE
T ss_pred ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC----------------cEEE
Confidence 357789999999999999999999999999999999997665678899999999999865 7899
Q ss_pred EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc------hHHHhhhc-
Q 046254 83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS------FMVQLGRL- 155 (321)
Q Consensus 83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~- 155 (321)
+.|++|+ ++|.+++|+|+++ + +.++++.|||++.+.+. .+.....+||||||++.++ ++.+|..+
T Consensus 117 i~Yg~Gs-~~G~~~~Dtv~ig-~-----~~v~~~~Fg~a~~~~~~-~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg 188 (370)
T 3psg_A 117 ITYGTGS-MTGILGYDTVQVG-G-----ISDTNQIFGLSETEPGS-FLYYAPFDGILGLAYPSISASGATPVFDNLWDQG 188 (370)
T ss_dssp EESSSCE-EEEEEEEEEEEET-T-----EEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTT
T ss_pred EEeCCce-EEEEEEEEEEeeC-C-----cccCCeEEEEEEeeccc-ccccCCccceeccCCccccccCCCCHHHHHHHCC
Confidence 9999998 8999999999999 7 89999999999988652 3445678999999998754 55566553
Q ss_pred --cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecCC-Cceeee------------ecCCcceEEeccCceEee
Q 046254 156 --VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIK------------LNGQRGCINDCGSVLTVI 215 (321)
Q Consensus 156 --~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~------------~~~~~~~iiDSGTt~~~l 215 (321)
.+++||+||.+.. ..+|.|+|||+|+.. +++++.. ..|.+. ......+||||||++++|
T Consensus 189 ~i~~~~FS~~L~~~~-~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~aiiDTGTs~~~l 267 (370)
T 3psg_A 189 LVSQDLFSVYLSSND-DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTG 267 (370)
T ss_dssp CSSSSEEEEEEC------CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEECTTCEEEEECTTCCSEEE
T ss_pred CCCCCEEEEEEccCC-CCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEecCCCceEEEcCCCCcEEC
Confidence 4689999999863 468999999999763 4566543 456543 124557999999999999
Q ss_pred chHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEEE-EecC
Q 046254 216 ECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFF-FGPA 294 (321)
Q Consensus 216 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~~-~~~~ 294 (321)
|++++++|.+++.+.. ...+ .....|... ..+|+|+|+|+|.+++||+++|+++ .++ .|+. +...
T Consensus 268 P~~~~~~i~~~i~a~~------~~~g--~~~v~C~~~----~~lP~i~f~~~g~~~~l~~~~yi~~-~~~-~C~~~~~~~ 333 (370)
T 3psg_A 268 PTSAIANIQSDIGASE------NSDG--EMVISCSSI----DSLPDIVFTIDGVQYPLSPSAYILQ-DDD-SCTSGFEGM 333 (370)
T ss_dssp EHHHHHHHHHHTTCEE------CTTC--CEECCGGGG----GGCCCEEEEETTEEEEECHHHHEEE-CSS-CEEESEEEE
T ss_pred CHHHHHHHHHHhCCcc------cCCC--cEEEECCCc----ccCCcEEEEECCEEEEECHHHhccc-CCC-EEEEEEEeC
Confidence 9999999999885431 1111 134556543 4689999999988999999999998 333 6985 5443
Q ss_pred CC--CCCCceeeechheeeeEEEEeCCCC
Q 046254 295 FT--PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 295 ~~--~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
.. ..++.||||++|||++|+|||++|.
T Consensus 334 ~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~ 362 (370)
T 3psg_A 334 DVPTSSGELWILGDVFIRQYYTVFDRANN 362 (370)
T ss_dssp CCCTTSCCEEEECHHHHTTEEEEEETTTT
T ss_pred CCCCCCCCcEEeChHHhcceEEEEECCCC
Confidence 11 1234799999999999999999984
No 6
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.8e-52 Score=382.44 Aligned_cols=278 Identities=18% Similarity=0.201 Sum_probs=222.4
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG 82 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~ 82 (321)
..+..|+++|.||||+|++.|++||||+++||+|+.|..|.. .++.|||++|+||+.++| |.|.
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~---------------~~~~ 75 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG---------------ATWS 75 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE---------------EEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC---------------CeEE
Confidence 467899999999999999999999999999999999998876 688999999999999753 7999
Q ss_pred EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCccccc-ccCcceEEeeCCCCCc---------hHHHh
Q 046254 83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQ-KKIIAGIMGLNWDSTS---------FMVQL 152 (321)
Q Consensus 83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql 152 (321)
+.|++|+.++|.+++|+|+|+ + +.++++.|||++.+.+ .+. ....+||||||++..+ ++.+|
T Consensus 76 i~Yg~Gs~~~G~~~~D~v~~g-~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 76 ISYGDGSSSSGDVYTDTVSVG-G-----LTVTGQAVESAKKVSS--SFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp EECTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEECH--HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred EEeCCCCcEEEEEEEEEEEEC-C-----EEEeeeEEEEEEecCc--cccccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 999999989999999999999 7 8999999999998765 332 2468999999987644 55677
Q ss_pred hhcc-CCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC--CCceeeee-----------cCCcceEEeccCceE
Q 046254 153 GRLV-PDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP--PNSFTIKL-----------NGQRGCINDCGSVLT 213 (321)
Q Consensus 153 ~~~~-~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~--~~~~~i~~-----------~~~~~~iiDSGTt~~ 213 (321)
..++ +++||+||.+ ...|.|+||++|+.+ +++++. ...|.+.. .....+||||||+++
T Consensus 148 ~~~i~~~~FS~~L~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 224 (329)
T 1oew_A 148 KASLDSPVFTADLGY---HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLL 224 (329)
T ss_dssp TTTSSSSEEEEECCS---SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSE
T ss_pred HHhccCcEEEEEccC---CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCCE
Confidence 6554 6899999987 368999999999763 566663 35676642 123469999999999
Q ss_pred eechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeEEEEE
Q 046254 214 VIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSFFFFF 291 (321)
Q Consensus 214 ~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~~~ 291 (321)
+||++++++|.+++.... + ....+ ....+|+ ..+|+|+|+|+|.+++||+++|++...+ ...|++.
T Consensus 225 ~lP~~~~~~l~~~i~~a~--~--~~~~g--~~~~~C~------~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~ 292 (329)
T 1oew_A 225 YLPATVVSAYWAQVSGAK--S--SSSVG--GYVFPCS------ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGG 292 (329)
T ss_dssp EECHHHHHHHHTTSTTCE--E--ETTTT--EEEEETT------CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEES
T ss_pred ECCHHHHHHHHHhCCCcE--E--cCCCC--EEEEECC------CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEE
Confidence 999999999988774321 0 11111 1234566 3579999999777999999999987532 3689974
Q ss_pred -ecCCCCCCCceeeechheeeeEEEEeC-CCC
Q 046254 292 -GPAFTPRKGKTILGARHQHNTQFVYDL-DTF 321 (321)
Q Consensus 292 -~~~~~~~~~~~ilG~~fl~~~~vvfD~-~~~ 321 (321)
... ...+.||||+.|||++|+|||+ +|.
T Consensus 293 i~~~--~~~~~~iLG~~fl~~~y~vfD~~~~~ 322 (329)
T 1oew_A 293 IQSS--AGIGINIFGDVALKAAFVVFNGATTP 322 (329)
T ss_dssp EEES--TTTSSEEECHHHHTTEEEEEECSSSC
T ss_pred EEeC--CCCCceEEChHHhcCEEEEEECCCCc
Confidence 443 2346899999999999999999 874
No 7
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=4.4e-52 Score=387.61 Aligned_cols=278 Identities=15% Similarity=0.227 Sum_probs=224.3
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC----CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCc
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK----SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDC 79 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~----~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~ 79 (321)
.+..|+++|.||||||++.|+|||||+++||+|..|. .|.. ++.|||++|+||+... |
T Consensus 59 ~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~--~~~y~~~~SsT~~~~~----------------~ 120 (383)
T 2x0b_A 59 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY--HKLFDASDSSSYKHNG----------------T 120 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT--SCCBCGGGCTTCEEEE----------------E
T ss_pred CCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC--CCCCCCCCCCcEEECC----------------c
Confidence 5789999999999999999999999999999999996 4864 5799999999999864 7
Q ss_pred eEEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc------hHHHhh
Q 046254 80 FYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS------FMVQLG 153 (321)
Q Consensus 80 ~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~ 153 (321)
.|.+.|++|+ ++|.+++|+|+|+ + +.++ +.|||++.+.+. .|.....|||||||++.++ ++.+|.
T Consensus 121 ~~~i~Yg~Gs-~~G~~~~Dtv~ig-~-----~~v~-~~Fg~a~~~~g~-~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~ 191 (383)
T 2x0b_A 121 ELTLRYSTGT-VSGFLSQDIITVG-G-----ITVT-QMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQAIGRVTPIFDNII 191 (383)
T ss_dssp EEEEECSSCE-EEEEEEEEEEEET-T-----EEEE-EEEEEEEECCHH-HHTTCSSSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred EEEEEcCCcc-EEEEEEeeEEEEc-C-----ceEE-EEEEEEEecCCc-ccccCCCceEeccCCCccccCCCCcHHHHHH
Confidence 9999999998 8999999999999 7 7888 999999987652 2444678999999998765 445565
Q ss_pred hc---cCCceEEeecCCCCC---CcceEEeCCCCCCc-----ceEecC-CCceeeee------------cCCcceEEecc
Q 046254 154 RL---VPDRFSCCLVQPDKS---FHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL------------NGQRGCINDCG 209 (321)
Q Consensus 154 ~~---~~~~Fs~~l~~~~~~---~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~------------~~~~~~iiDSG 209 (321)
.+ .+++||+||.+.... .+|.|+|||+|+.. +++++. ...|.+.. .....+|||||
T Consensus 192 ~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTG 271 (383)
T 2x0b_A 192 SQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDTG 271 (383)
T ss_dssp TTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEESSCCCBSTTCEEEEECTT
T ss_pred hCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEeCCceEEcCCCcEEEEcCC
Confidence 54 368999999886422 38999999999763 566664 35676541 23457999999
Q ss_pred CceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeE
Q 046254 210 SVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSF 287 (321)
Q Consensus 210 Tt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~ 287 (321)
|+++++|++++++|.+++.+.. ... .....|+.. ..+|+|+|+|+|.+++||+++|+++..+ +..
T Consensus 272 Ts~~~lP~~~~~~i~~~i~a~~-----~~g----~~~v~C~~~----~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~ 338 (383)
T 2x0b_A 272 ASYISGSTSSIEKLMEALGAKK-----RLF----DYVVKCNEG----PTLPDISFHLGGKEYTLTSADYVFQESYSSKKL 338 (383)
T ss_dssp CSSEEECHHHHHHHHHHHTCEE-----CSS----CEEEEGGGT----TTCCCEEEEETTEEEEECHHHHBCCCCCCTTSE
T ss_pred CceEEcCHHHHHHHHHHhCCcc-----cCC----cEEEecccc----ccCceEEEEECCEEEEECHHHhEeeccCCCCCe
Confidence 9999999999999999985431 111 134568765 3689999999988999999999998654 458
Q ss_pred EE-EEecCCC--CCCCceeeechheeeeEEEEeCCCC
Q 046254 288 FF-FFGPAFT--PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 288 C~-~~~~~~~--~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
|+ ++..... +..+.||||++|||++|+|||++|+
T Consensus 339 C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ 375 (383)
T 2x0b_A 339 CTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNN 375 (383)
T ss_dssp EEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTT
T ss_pred EEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCC
Confidence 99 5655421 1346899999999999999999984
No 8
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.1e-51 Score=375.79 Aligned_cols=274 Identities=19% Similarity=0.237 Sum_probs=219.7
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK--SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFY 81 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~--~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~ 81 (321)
.+..|+++|.||||||++.|++||||+++||+|+.|. .|. .++.|||++|+||+... |.|
T Consensus 12 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~----------------~~~ 73 (323)
T 3cms_A 12 LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACK--NHQRFDPRKSSTFQNLG----------------KPL 73 (323)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH--TSCCBCGGGCTTCEEEE----------------EEE
T ss_pred cCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCccccc--CCCCCCCccCCCeEECC----------------cEE
Confidence 5789999999999999999999999999999999994 576 46789999999999865 789
Q ss_pred EEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCC------chHHHhhhc
Q 046254 82 GITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDST------SFMVQLGRL 155 (321)
Q Consensus 82 ~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~ 155 (321)
.+.|++|+ ++|.+++|+|+++ + +.++++.|||+..+.+. .|.....+||||||++.. +++.+|..+
T Consensus 74 ~i~Yg~Gs-~~G~~~~D~v~ig-~-----~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 145 (323)
T 3cms_A 74 SIHYGTGS-MQGILGYDTVTVS-N-----IVDIQQTVGLSTQEPGD-FFTYAEFDGILGMAYPSLASEYSIPVFDNMMNR 145 (323)
T ss_dssp EEEETTEE-EEEEEEEEEEEET-T-----EEEEEEEEEEEEECCSH-HHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHT
T ss_pred EEEeCCCC-eEEEEEEEEEEEC-C-----eEEeccEEEEEEecccc-cccccCCceEEecCcchhhccCCCCHHHHHHHC
Confidence 99999998 8999999999999 7 89999999999987551 233456899999998865 456666654
Q ss_pred ---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC-CCceeeee------------cCCcceEEeccCceEe
Q 046254 156 ---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL------------NGQRGCINDCGSVLTV 214 (321)
Q Consensus 156 ---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~------------~~~~~~iiDSGTt~~~ 214 (321)
.+++||+||.+.. ..|.|+||++|+.+ +++++. ...|.+.. .....+||||||++++
T Consensus 146 ~~i~~~~FS~~l~~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~ 223 (323)
T 3cms_A 146 HLVAQDLFSVYMDRNG--QESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACEGGCQAILDTGTSKLV 223 (323)
T ss_dssp TCSSSSEEEEECCTTS--SCEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEESTTCEEEEECTTCCSEE
T ss_pred CCCCCCEEEEEECCCC--CCEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecCCCcEEEEecCCccEe
Confidence 3689999998863 34999999999763 455654 35665531 2345799999999999
Q ss_pred echHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEEE-Eec
Q 046254 215 IECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFF-FGP 293 (321)
Q Consensus 215 lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~~-~~~ 293 (321)
||++++++|.+++.+.. ... + .....|+.. ..+|+|+|+|+|.+++||+++|+++ .+..|+. +..
T Consensus 224 lP~~~~~~l~~~~~~~~----~~~--g--~~~~~C~~~----~~~P~i~f~f~g~~~~i~~~~y~~~--~~~~C~~~i~~ 289 (323)
T 3cms_A 224 GPSSDILNIQQAIGATQ----NQY--G--EFDIDCDNL----SYMPTVVFEINGKMYPLTPSAYTSQ--DQGFCTSGFQS 289 (323)
T ss_dssp ECHHHHHHHHHHHTCEE----ETT--T--EEEECTTCT----TTSCCEEEEETTEEEEECHHHHEEE--ETTEEEESEEE
T ss_pred CCHHHHHHHHHHhCCee----cCC--C--cEEEECCCC----ccCceEEEEECCEEEEECHHHhccC--CCCEEEEEEEe
Confidence 99999999999885431 111 1 123456643 4689999999888999999999998 3468985 655
Q ss_pred CCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 294 AFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 294 ~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
. ...+.||||+.|||++|+|||++|.
T Consensus 290 ~--~~~~~~iLG~~fl~~~y~vfD~~~~ 315 (323)
T 3cms_A 290 E--NHSQKWILGDVFIREYYSVFDRANN 315 (323)
T ss_dssp C-----CCEEECHHHHTTEEEEEETTTT
T ss_pred C--CCCCcEEECHHHhhceEEEEECCCC
Confidence 4 2346899999999999999999974
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.2e-51 Score=375.56 Aligned_cols=278 Identities=19% Similarity=0.301 Sum_probs=219.5
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCC--CCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKS--CYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFY 81 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~--C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~ 81 (321)
.+..|+++|.||||+|++.|++||||+++||+|+.|.. |. .++.|||++|+||+... |.|
T Consensus 11 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~----------------~~~ 72 (329)
T 1dpj_A 11 LNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACF--LHSKYDHEASSSYKANG----------------TEF 72 (329)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH--TSCCBCGGGCTTCEEEE----------------EEE
T ss_pred CCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccC--CcCcCCcccCcCeEECC----------------cEE
Confidence 56899999999999999999999999999999999987 65 46789999999999854 799
Q ss_pred EEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCch------HHHhhhc
Q 046254 82 GITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSF------MVQLGRL 155 (321)
Q Consensus 82 ~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s~------~~ql~~~ 155 (321)
.+.|++|+ ++|.+++|+|+|+ + +.++++.|||++.+.+. .|.....+||||||++..++ +.+|..+
T Consensus 73 ~i~Yg~Gs-~~G~~~~D~v~ig-~-----~~~~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 144 (329)
T 1dpj_A 73 AIQYGTGS-LEGYISQDTLSIG-D-----LTIPKQDFAEATSEPGL-TFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQ 144 (329)
T ss_dssp EEEETTEE-EEEEEEEEEEEET-T-----EEEEEEEEEEEEECCHH-HHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHT
T ss_pred EEEECCce-EEEEEEEEEEEEC-C-----eEECCeEEEEEEecCcc-ccccCCcceEEEeCCchhhccCCCCHHHHHHhc
Confidence 99999995 9999999999999 7 89999999999887541 23335689999999987653 3455543
Q ss_pred ---cCCceEEeecCCC--CCCcceEEeCCCCCCc-----ceEecCC-Cceeeee-----------cCCcceEEeccCceE
Q 046254 156 ---VPDRFSCCLVQPD--KSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL-----------NGQRGCINDCGSVLT 213 (321)
Q Consensus 156 ---~~~~Fs~~l~~~~--~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~-----------~~~~~~iiDSGTt~~ 213 (321)
.+++||+||.+.. ...+|.|+||++|+.+ +++++.. ..|.+.. ..+..+||||||+++
T Consensus 145 g~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 224 (329)
T 1dpj_A 145 DLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLI 224 (329)
T ss_dssp TCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEECSSCEEEECTTCSCE
T ss_pred CCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEecCCCccEEeeCCCCcE
Confidence 3589999997642 1247999999999763 4566543 5666541 245679999999999
Q ss_pred eechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEE-EEe
Q 046254 214 VIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFF-FFG 292 (321)
Q Consensus 214 ~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~-~~~ 292 (321)
+||+++|++|.+++.+.. ...+ .....|... ..+|+|+|+|+|.+++||+++|+++.. ..|+ ++.
T Consensus 225 ~lP~~~~~~l~~~~~~~~------~~~g--~~~~~C~~~----~~~P~i~f~f~g~~~~i~~~~y~~~~~--~~C~~~~~ 290 (329)
T 1dpj_A 225 TLPSGLAEMINAEIGAKK------GWTG--QYTLDCNTR----DNLPDLIFNFNGYNFTIGPYDYTLEVS--GSCISAIT 290 (329)
T ss_dssp EECHHHHHHHHHHHTCEE------CTTS--SEEECGGGG----GGCCCEEEEETTEEEEECTTTSEEEET--TEEEECEE
T ss_pred ECCHHHHHHHHHHhCCcc------CCCC--eEEEECCCC----CcCCcEEEEECCEEEEECHHHhEecCC--CEEEEEEE
Confidence 999999999999885431 1001 122345433 468999999998899999999999865 5898 455
Q ss_pred cCCC--CCCCceeeechheeeeEEEEeCCCC
Q 046254 293 PAFT--PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 293 ~~~~--~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
.... ..++.||||+.|||++|+|||++|.
T Consensus 291 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 321 (329)
T 1dpj_A 291 PMDFPEPVGPLAIVGDAFLRKYYSIYDLGNN 321 (329)
T ss_dssp ECCCCTTTCSEEEECHHHHTTEEEEEETTTT
T ss_pred ecccCCCCCCcEEEChHHhcceEEEEECCCC
Confidence 4311 1246899999999999999999974
No 10
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.1e-51 Score=377.19 Aligned_cols=277 Identities=20% Similarity=0.224 Sum_probs=222.9
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG 82 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~ 82 (321)
..+..|+++|.||||||++.|++||||+++||+|+.|..|.++.++.|||++|+||+... |.|.
T Consensus 8 ~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~----------------~~~~ 71 (320)
T 4aa9_A 8 YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG----------------KPLS 71 (320)
T ss_dssp CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE----------------EEEE
T ss_pred ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC----------------cEEE
Confidence 357899999999999999999999999999999999985333456899999999999875 7899
Q ss_pred EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCC------chHHHhhhc-
Q 046254 83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDST------SFMVQLGRL- 155 (321)
Q Consensus 83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~- 155 (321)
+.|++|+ ++|.+++|+|+++ + +.++++.|||++...+. .+.....+||||||++.. +++.+|..+
T Consensus 72 i~Yg~gs-~~G~~~~D~v~ig-~-----~~v~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g 143 (320)
T 4aa9_A 72 IHYGTGS-MEGFLGYDTVTVS-N-----IVDPNQTVGLSTEQPGE-VFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRH 143 (320)
T ss_dssp EEETTEE-EEEEEEEEEEEET-T-----EEEEEEEEEEEEECCSH-HHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTT
T ss_pred EEECCcE-EEEEEEEEEEEEC-C-----EeecCeEEEEEEEcccc-cccccCcccEEecCcccccccCCCCHHHHHHhCC
Confidence 9999998 8999999999999 7 89999999999887651 243456799999998754 466777654
Q ss_pred --cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecCC-Cceeeee------------cCCcceEEeccCceEee
Q 046254 156 --VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL------------NGQRGCINDCGSVLTVI 215 (321)
Q Consensus 156 --~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~------------~~~~~~iiDSGTt~~~l 215 (321)
.+++||+||.+. ...|.|+|||+|+.+ +++++.. ..|.++. .....+||||||++++|
T Consensus 144 ~i~~~~Fs~~l~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~l 221 (320)
T 4aa9_A 144 LVARDLFSVYMDRN--GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACVGGCQAILDTGTSVLFG 221 (320)
T ss_dssp CSSSSEEEEECCSS--SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEESTTCEEEEECTTCSSEEE
T ss_pred CCCCceEEEEeCCC--CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccCCCcEEEEECCCCcEEC
Confidence 368899999985 468999999999764 4555543 5565531 23457999999999999
Q ss_pred chHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEEE-EecC
Q 046254 216 ECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFF-FGPA 294 (321)
Q Consensus 216 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~~-~~~~ 294 (321)
|++++++|.+++.+... .. + .....|... ..+|+|+|+|+|.+++||+++|+.+. +..|+. +...
T Consensus 222 P~~~~~~i~~~~~~~~~----~~--g--~~~~~C~~~----~~~p~i~f~f~g~~~~l~~~~y~~~~--~~~C~~~i~~~ 287 (320)
T 4aa9_A 222 PSSDILKIQMAIGATEN----RY--G--EFDVNCGNL----RSMPTVVFEINGRDYPLSPSAYTSKD--QGFCTSGFQGD 287 (320)
T ss_dssp EHHHHHHHHHHTTCEEC----TT--S--CEEECGGGG----GGCCCEEEEETTEEEEECHHHHEEEE--TTEEEESEEEE
T ss_pred CHHHHHHHHHHhCCccc----CC--C--cEEEeCCCC----CcCceEEEEECCEEEEECHHHhccCC--CCeEEEEEEcC
Confidence 99999999998854320 11 1 134566654 35899999999889999999999863 368985 6554
Q ss_pred CCCCCCceeeechheeeeEEEEeCCCC
Q 046254 295 FTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 295 ~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
..++.+|||+.|||++|+|||++|.
T Consensus 288 --~~~~~~ilG~~fl~~~y~vfD~~~~ 312 (320)
T 4aa9_A 288 --NNSELWILGDVFIREYYSVFDRANN 312 (320)
T ss_dssp --TTCCCEEECHHHHTTEEEEEETTTT
T ss_pred --CCCCcEEEChHHhcceEEEEECCCC
Confidence 3346899999999999999999974
No 11
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3.6e-51 Score=375.21 Aligned_cols=279 Identities=21% Similarity=0.289 Sum_probs=223.5
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCC--CCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCce
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKS--CYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCF 80 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~--C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~ 80 (321)
..+..|+++|.||||+|++.|++||||+++||+|+.|.. |.. ++.|||++|+||+... |.
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~--~~~y~~~~SsT~~~~~----------------~~ 70 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS--HSRFNPSESSTYSTNG----------------QT 70 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT--SCCBCGGGCTTCEEEE----------------EE
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC--CCcCCCccCCCeEECC----------------cE
Confidence 457899999999999999999999999999999999985 753 6799999999999864 79
Q ss_pred EEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc------hHHHhhh
Q 046254 81 YGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS------FMVQLGR 154 (321)
Q Consensus 81 ~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~ 154 (321)
|.+.|++|+ +.|.+++|+|+++ + +.++++.|||+..+.+. .+.....+||||||++..+ ++.+|..
T Consensus 71 ~~i~Yg~gs-~~G~~~~D~v~~g-~-----~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (329)
T 1htr_B 71 FSLQYGSGS-LTGFFGYDTLTVQ-S-----IQVPNQEFGLSENEPGT-NFVYAQFDGIMGLAYPALSVDEATTAMQGMVQ 142 (329)
T ss_dssp EEEEETTEE-EEEEEEEEEEEET-T-----EEEEEEEEEEESSCSSG-GGGGCSCCEEEECCCCSCCCTTCCSHHHHHHH
T ss_pred EEEEeCCCC-eEEEEEeeeEEEc-c-----eEECceEEEEEEEcccc-ccccCCCceEEecCCCcccccCCCCHHHHHHh
Confidence 999999998 6999999999999 7 89999999999987652 2444678999999998764 5666765
Q ss_pred c---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC-CCceeeee-------------cCCcceEEeccCce
Q 046254 155 L---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL-------------NGQRGCINDCGSVL 212 (321)
Q Consensus 155 ~---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~-------------~~~~~~iiDSGTt~ 212 (321)
+ .+++||+||.+......|.|+||++|+.+ +++++. ...|.+.. .....+||||||++
T Consensus 143 qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~ 222 (329)
T 1htr_B 143 EGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSL 222 (329)
T ss_dssp TTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCS
T ss_pred cCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCcc
Confidence 4 36899999988642238999999999763 455654 35665431 13457999999999
Q ss_pred EeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEE-EE
Q 046254 213 TVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFF-FF 291 (321)
Q Consensus 213 ~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~-~~ 291 (321)
++||+++|++|.+++.+... .. + .....|+.. ..+|+|+|+|+|.+++||+++|+++.. + .|+ ++
T Consensus 223 ~~lp~~~~~~l~~~~~~~~~----~~--g--~~~~~C~~~----~~~P~i~f~f~g~~~~i~~~~y~~~~~-g-~C~~~~ 288 (329)
T 1htr_B 223 LTVPQQYMSALLQATGAQED----EY--G--QFLVNCNSI----QNLPSLTFIINGVEFPLPPSSYILSNN-G-YCTVGV 288 (329)
T ss_dssp EEEEGGGHHHHHHHHTCEEC----TT--S--CEEECGGGG----GGSCCEEEEETTEEEEECHHHHEEECS-S-CEEESE
T ss_pred EECCHHHHHHHHHHhCCeec----CC--C--eEEEeCCCc----ccCCcEEEEECCEEEEECHHHhcccCC-C-EEEEEE
Confidence 99999999999998855321 11 1 134567754 358999999988899999999999876 4 898 46
Q ss_pred ecCCC--CCCC-ceeeechheeeeEEEEeCCCC
Q 046254 292 GPAFT--PRKG-KTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 292 ~~~~~--~~~~-~~ilG~~fl~~~~vvfD~~~~ 321 (321)
..... +.++ .||||+.|||++|+|||++|.
T Consensus 289 ~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~ 321 (329)
T 1htr_B 289 EPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNN 321 (329)
T ss_dssp EEECCCCTTSSCEEEECHHHHTTEEEEEETTTT
T ss_pred EECCCCCCCCCceEEEChHHhccEEEEEECCCC
Confidence 54311 1235 899999999999999999974
No 12
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.7e-51 Score=378.27 Aligned_cols=279 Identities=19% Similarity=0.266 Sum_probs=222.0
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK--SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFY 81 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~--~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~ 81 (321)
.+..|+++|.||||+|++.|++||||+++||+|+.|. .|. .++.|||++|+||+.. .|.|
T Consensus 21 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~--~~~~y~~~~SsT~~~~----------------~~~~ 82 (351)
T 1tzs_A 21 LDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACK--THSRFQPSQSSTYSQP----------------GQSF 82 (351)
T ss_dssp SSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGT--TSCCBCGGGCTTCBCC----------------SCEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccC--CCCcCCcccCcceEEC----------------CCEE
Confidence 5788999999999999999999999999999999998 575 4679999999999874 4799
Q ss_pred EEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc------hHHHhhhc
Q 046254 82 GITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS------FMVQLGRL 155 (321)
Q Consensus 82 ~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~ 155 (321)
.+.|++|+ ++|.+++|+|+|+ + +.++++.|||++.+.+. .+.....+||||||++.++ ++.+|..+
T Consensus 83 ~i~Yg~Gs-~~G~~~~D~v~ig-~-----~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 154 (351)
T 1tzs_A 83 SIQYGTGS-LSGIIGADQVSVE-G-----LTVVGQQFGESVTEPGQ-TFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQ 154 (351)
T ss_dssp EEESSSCE-EEEEEEEEEEEET-T-----EEEEEEEEEEECSCCCG-GGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHT
T ss_pred EEEeCCCC-eEEEEEEeEEEEC-C-----eEECCeEEEEEEecccc-ccccCCCceEEecCCccccccCCCcHHHHHHHC
Confidence 99999998 8999999999999 7 89999999999987652 3444678999999998754 55666654
Q ss_pred ---cCCceEEeecCCCC-CCcceEEeCCCCCCc-----ceEecC-CCceeeee------------cCCcceEEeccCceE
Q 046254 156 ---VPDRFSCCLVQPDK-SFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL------------NGQRGCINDCGSVLT 213 (321)
Q Consensus 156 ---~~~~Fs~~l~~~~~-~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~------------~~~~~~iiDSGTt~~ 213 (321)
.+++||+||.+... ..+|.|+|||+|+.. +++++. ...|.+.. .....+||||||+++
T Consensus 155 g~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~ 234 (351)
T 1tzs_A 155 NLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLI 234 (351)
T ss_dssp TCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEECTTCEEEEECTTCSSE
T ss_pred CCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEEcCCCceEEeccCCcce
Confidence 36899999988631 138999999999753 455554 25565431 234579999999999
Q ss_pred eechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeEEEE-
Q 046254 214 VIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSFFFF- 290 (321)
Q Consensus 214 ~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~~- 290 (321)
+||+++|++|.+++.+... . + .....|+.. ..+|+|+|+|+|.+++||+++|+++..+ +..|+.
T Consensus 235 ~lP~~~~~~l~~~~~~~~~-----~--g--~~~~~C~~~----~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~ 301 (351)
T 1tzs_A 235 TGPSDKIKQLQNAIGAAPV-----D--G--EYAVECANL----NVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSG 301 (351)
T ss_dssp EECHHHHHHHHHHHTCEEC-----S--S--SEEECGGGG----GGSCCEEEEETTEEEEECTTTSEECC-----CCEEES
T ss_pred eCCHHHHHHHHHHhCCccc-----C--C--eEEEeCCCC----ccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEE
Confidence 9999999999998854321 1 1 134567764 3579999999888999999999997653 358994
Q ss_pred EecCCC--CCCCceeeechheeeeEEEEeCCCC
Q 046254 291 FGPAFT--PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 291 ~~~~~~--~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+..... +..+.||||+.|||++|+|||++|.
T Consensus 302 ~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 334 (351)
T 1tzs_A 302 FQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNN 334 (351)
T ss_dssp EEECCCCTTTCSCEEECHHHHHHEEEEEETTTT
T ss_pred EEECCCCCCCCCeEEEChHHhhheEEEEECCCC
Confidence 654321 1346899999999999999999974
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.5e-51 Score=375.49 Aligned_cols=276 Identities=19% Similarity=0.240 Sum_probs=220.9
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCC--CCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKS--CYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFY 81 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~--C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~ 81 (321)
.+..|+++|.||||||++.|++||||+++||+|+.|.. |. .++.|||++|+||+... |.|
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~----------------~~~ 71 (324)
T 1am5_A 10 ADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACS--NHNKFKPRQSSTYVETG----------------KTV 71 (324)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHH--TSCCBCGGGCTTCEEEE----------------EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccc--CCCcCCCccCCCeEeCC----------------cEE
Confidence 57899999999999999999999999999999999984 75 36799999999999864 799
Q ss_pred EEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc------hHHHhhhc
Q 046254 82 GITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS------FMVQLGRL 155 (321)
Q Consensus 82 ~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~ 155 (321)
.+.|++|+ ++|.+++|+|+++ + +.++++.|||++.+.+. .+.....+||||||++..+ ++.+|..+
T Consensus 72 ~i~Yg~Gs-~~G~~~~D~v~~g-~-----~~~~~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 143 (324)
T 1am5_A 72 DLTYGTGG-MRGILGQDTVSVG-G-----GSDPNQELGESQTEPGP-FQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQ 143 (324)
T ss_dssp EEECSSCE-EEEEEEEEEEESS-S-----SCEEEEEEEEEEECCST-TTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHT
T ss_pred EEEECCCC-eEEEEEECceeEC-C-----cEEcccEEEEEEecccc-cccCCCCceEEecCCccccccCCCchHHhHHhc
Confidence 99999998 6999999999999 7 78999999999987651 2444678999999998654 55666654
Q ss_pred ---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC-CCceeeee-----------cCCcceEEeccCceEee
Q 046254 156 ---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL-----------NGQRGCINDCGSVLTVI 215 (321)
Q Consensus 156 ---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~-----------~~~~~~iiDSGTt~~~l 215 (321)
.+++||+||.+.. ...|.|+||++|+.+ +++++. ...|.+.. .....+||||||++++|
T Consensus 144 g~i~~~~FS~~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~l 222 (324)
T 1am5_A 144 SLVEKDLFSFYLSGGG-ANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAACEGCQAIVDTGTSKIVA 222 (324)
T ss_dssp TCSSSSEEEEECCSTT-CSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCCCCEEEEECTTCSSEEE
T ss_pred CCCCCCEEEEEecCCC-CCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeeccCceEEEecCCccEEC
Confidence 3689999998863 358999999999753 444443 35565431 11267999999999999
Q ss_pred chHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEE-EEecC
Q 046254 216 ECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFF-FFGPA 294 (321)
Q Consensus 216 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~-~~~~~ 294 (321)
|+++|++|.+++.+. . .. + .....|+.. ..+|+|+|+|+|.+++||+++|+++. +..|+ ++...
T Consensus 223 p~~~~~~l~~~~~~~-~----~~--g--~~~~~C~~~----~~~P~i~f~f~g~~~~i~~~~y~~~~--~~~C~~~~~~~ 287 (324)
T 1am5_A 223 PVSALANIMKDIGAS-E----NQ--G--EMMGNCASV----QSLPDITFTINGVKQPLPPSAYIEGD--QAFCTSGLGSS 287 (324)
T ss_dssp CTTTHHHHHHHHTCE-E----CC--C--CEECCTTSS----SSSCCEEEEETTEEEEECHHHHEEES--SSCEEECEEEC
T ss_pred CHHHHHHHHHHhCCc-c----cC--C--cEEEeCCCc----ccCCcEEEEECCEEEEECHHHhcccC--CCeEEEEEEEC
Confidence 999999999988543 1 11 1 134566653 46899999998889999999999987 46898 46544
Q ss_pred CC--CCCCceeeechheeeeEEEEeCCCC
Q 046254 295 FT--PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 295 ~~--~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
.. ...+.||||+.|||++|+|||++|.
T Consensus 288 ~~~~~~~~~~ilG~~fl~~~y~vfD~~~~ 316 (324)
T 1am5_A 288 GVPSNTSELWIFGDVFLRNYYTIYDRTNN 316 (324)
T ss_dssp CSCCSSSCEEEECHHHHHHEEEEEETTTT
T ss_pred ccCCCCCCcEEEChHHhccEEEEEECCCC
Confidence 21 1246899999999999999999974
No 14
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=7.1e-51 Score=373.95 Aligned_cols=270 Identities=18% Similarity=0.275 Sum_probs=217.5
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCC--CCCCC-------CCCCCCCccCCCCCccceeeCCCCCCCCCCC
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQ--PCKSC-------YEQNDPIYNSRSFKSYKKLPCYDASCKSPFH 73 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~--~C~~C-------~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~ 73 (321)
+.+..|+++|.||||+|++.|++||||+++||+|+ .|..| .++.++.|||++|+||+...
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----------- 77 (334)
T 1j71_A 9 NEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN----------- 77 (334)
T ss_dssp ECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE-----------
T ss_pred cCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC-----------
Confidence 45779999999999999999999999999999876 67643 12357799999999999875
Q ss_pred CCCCCceEEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCC-------
Q 046254 74 CFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDST------- 146 (321)
Q Consensus 74 c~~~~~~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~------- 146 (321)
|.|.+.|++|+.++|.+++|+|+++ + +.++++.|||++.... .+||||||++..
T Consensus 78 -----~~~~i~Yg~Gs~~~G~~~~D~v~~g-~-----~~~~~~~fg~~~~~~~--------~~GilGLg~~~~~~~~~~~ 138 (334)
T 1j71_A 78 -----QDFSIEYGDLTSSQGSFYKDTVGFG-G-----ISIKNQQFADVTTTSV--------DQGIMGIGFTADEAGYNLY 138 (334)
T ss_dssp -----EEEEEEBTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEESS--------SSCEEECSCGGGSSTTCCC
T ss_pred -----CceEEEECCCCEEEEEEEEEEEEEC-C-----EEEccEEEEEEEecCC--------CccEEEEcCCcccCccccC
Confidence 7999999999888999999999999 7 8999999999987643 699999999764
Q ss_pred -chHHHhhhc---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecCC-Cceeeee----------cCCcceEE
Q 046254 147 -SFMVQLGRL---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL----------NGQRGCIN 206 (321)
Q Consensus 147 -s~~~ql~~~---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~----------~~~~~~ii 206 (321)
+++.+|..+ .+++||+||.+.. ...|.|+|||+|+.+ +++++.. ..|.+.. .....+||
T Consensus 139 ~~~~~~L~~qg~i~~~~Fs~~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~ii 217 (334)
T 1j71_A 139 DNVPVTLKKQGIINKNAYSLYLNSED-ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVSTNADVVL 217 (334)
T ss_dssp CCHHHHHHHTTSCSSSEEEEECCCTT-CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcHHHHHHHCCCCCccEEEEEeCCCC-CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccCCccEEE
Confidence 678888764 3589999998753 468999999999764 4566543 4566542 12356999
Q ss_pred eccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCc-cceEecCCCCCCCCeEEEEEe-CcEEEeCCCceEEEcCC
Q 046254 207 DCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCG-VTCFNLPARFNSFPSMTYHFQ-GADLVVEPENVFIFNHQ 284 (321)
Q Consensus 207 DSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~P~i~~~f~-g~~~~i~~~~y~~~~~~ 284 (321)
||||++++||+++|++|.+++.+... ... . ... ..|+ .+|+|+|+|. |.+++||+++|+++..+
T Consensus 218 DSGTt~~~lP~~~~~~l~~~~~~~~~----~~~-~--~~~~~~C~-------~~p~i~f~f~~g~~~~i~~~~y~~~~~~ 283 (334)
T 1j71_A 218 DSGTTITYFSQSTADKFARIVGATWD----SRN-E--IYRLPSCD-------LSGDAVFNFDQGVKITVPLSELILKDSD 283 (334)
T ss_dssp CTTCSSEEECHHHHHHHHHHHTCEEE----TTT-T--EEECSSSC-------CCSEEEEEESTTCEEEEEGGGGEEECSS
T ss_pred eCCCCcEecCHHHHHHHHHHcCCccc----CCC-c--eEEEEcCC-------CCCceEEEEcCCcEEEECHHHheeecCC
Confidence 99999999999999999999876531 010 0 122 5665 2699999996 55999999999998766
Q ss_pred CeEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 285 DSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 285 ~~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+..|+..+.. .+.+|||+.|||++|+|||++|.
T Consensus 284 ~~~C~~~i~~----~~~~iLG~~fl~~~y~vfD~~~~ 316 (334)
T 1j71_A 284 SSICYFGISR----NDANILGDNFLRRAYIVYDLDDK 316 (334)
T ss_dssp SSCEEESEEE----CTTCEECHHHHTTEEEEEETTTT
T ss_pred CCeeEEEEeE----CCCcEEChHhhccEEEEEECCCC
Confidence 5569875554 23699999999999999999974
No 15
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.4e-50 Score=373.23 Aligned_cols=273 Identities=18% Similarity=0.219 Sum_probs=215.8
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCC--CCCCCC-------CCCCCCccCCCCCccceeeCCCCCCCCCCC
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQ--PCKSCY-------EQNDPIYNSRSFKSYKKLPCYDASCKSPFH 73 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~--~C~~C~-------~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~ 73 (321)
..+..|+++|.||||+|++.|++||||+++||+|+ .|..|. ++.++.|||++|+||+...
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----------- 77 (342)
T 2qzx_A 9 NEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN----------- 77 (342)
T ss_dssp ECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE-----------
T ss_pred cCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC-----------
Confidence 46789999999999999999999999999999865 676431 2346799999999999875
Q ss_pred CCCCCceEEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCC-------
Q 046254 74 CFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDST------- 146 (321)
Q Consensus 74 c~~~~~~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~------- 146 (321)
|.|.+.|++|+.++|.+++|+|+|+ + +.++++.|||++.... .+||||||++..
T Consensus 78 -----~~~~i~Yg~Gs~~~G~~~~D~v~~g-~-----~~v~~~~fg~~~~~~~--------~~GilGLg~~~~~~~~~~~ 138 (342)
T 2qzx_A 78 -----TRFDIKYGDGSYAKGKLYKDTVGIG-G-----VSVRDQLFANVWSTSA--------RKGILGIGFQSGEATEFDY 138 (342)
T ss_dssp -----EEEEEECTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEECS--------SSCEEECSCGGGCSSSSCC
T ss_pred -----CcEEEEeCCCCeEEEEEEEEEEEEC-C-----EEecceEEEEEEecCC--------CcCEEEEccccccCCCccC
Confidence 7899999999888999999999999 7 8999999999987643 699999999764
Q ss_pred -chHHHhhhc---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecCC-Cceeeee----------cCCcceEE
Q 046254 147 -SFMVQLGRL---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL----------NGQRGCIN 206 (321)
Q Consensus 147 -s~~~ql~~~---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~----------~~~~~~ii 206 (321)
+++.+|..+ .+++||+||.+.. ...|.|+|||+|+.+ +++++.. ..|.+.. .....+||
T Consensus 139 ~~~~~~L~~qg~i~~~~Fs~~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~aii 217 (342)
T 2qzx_A 139 DNLPISLRNQGIIGKAAYSLYLNSAE-ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDANTNVLL 217 (342)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCCTT-CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccHHHHHHHCCCcCccEEEEEeCCCC-CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCCCcCEEE
Confidence 678888765 3589999998753 468999999999763 4666643 4566541 12346999
Q ss_pred eccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEe-CcEEEeCCCceEEEcC--
Q 046254 207 DCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQ-GADLVVEPENVFIFNH-- 283 (321)
Q Consensus 207 DSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~-g~~~~i~~~~y~~~~~-- 283 (321)
||||++++||+++|++|.+++.+... +...... ....+|+ .+|+|+|+|. |.+++||+++|+++..
T Consensus 218 DSGTt~~~lP~~~~~~l~~~~~~~~~-~~~~~~~---~~~~~C~-------~~p~i~f~f~~g~~~~i~~~~~~~~~~~~ 286 (342)
T 2qzx_A 218 DSGTTISYFTRSIVRNILYAIGAQMK-FDSAGNK---VYVADCK-------TSGTIDFQFGNNLKISVPVSEFLFQTYYT 286 (342)
T ss_dssp CTTCSSEEECHHHHHHHHHHHTCEEE-ECTTSCE---EEEECTT-------CCCEEEEEETTTEEEEEEGGGGEECCBCT
T ss_pred eCCCCCEEcCHHHHHHHHHHhCCeee-eccCCCc---EEEEECC-------CCCcEEEEECCCcEEEEcHHHhccccccc
Confidence 99999999999999999999876542 1111100 0223453 3799999996 4599999999999742
Q ss_pred --C-CeEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 284 --Q-DSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 284 --~-~~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+ +..|++.+.. .+.+|||+.|||++|+|||++|.
T Consensus 287 ~~~~~~~C~~~i~~----~~~~iLG~~fl~~~y~vfD~~~~ 323 (342)
T 2qzx_A 287 SGKPFPKCEVRIRE----SEDNILGDNFLRSAYVVYNLDDK 323 (342)
T ss_dssp TSCBCSSEEESEEE----CSSCEECHHHHTTEEEEEETTTT
T ss_pred CCCCCCccEEEEec----CCCcEeChHhhhcEEEEEECCCC
Confidence 2 3589976554 23699999999999999999974
No 16
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.1e-49 Score=364.21 Aligned_cols=275 Identities=15% Similarity=0.154 Sum_probs=219.5
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG 82 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~ 82 (321)
..+..|+++|.|| ||++.|++||||+++||+|+.|..|.++.++.|||++|+ ++.. .|.|.
T Consensus 12 ~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~----------------~~~~~ 72 (323)
T 1izd_A 12 SNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKID----------------GATWS 72 (323)
T ss_dssp GGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEE----------------EEEEE
T ss_pred CCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccC----------------CCeEE
Confidence 3578899999999 899999999999999999999998776678899999999 5532 48999
Q ss_pred EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCccccc-ccCcceEEeeCCCCCc---------hHHHh
Q 046254 83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQ-KKIIAGIMGLNWDSTS---------FMVQL 152 (321)
Q Consensus 83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql 152 (321)
+.|++|+.++|.+++|+|+|+ + +.++++.|||++.+.+ .+. ....+||||||++.++ ++.+|
T Consensus 73 i~Yg~Gs~~~G~~~~D~v~ig-~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 144 (323)
T 1izd_A 73 ISYGDGSSASGDVYKDKVTVG-G-----VSYDSQAVESAEKVSS--EFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNV 144 (323)
T ss_dssp EECTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEECH--HHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred EEcCCCCeEEEEEEEEEEEEC-C-----EEECceEEEEEEeccc--cccccCCCceEEecCcccccccCCCCCCCHHHHH
Confidence 999999989999999999999 7 8999999999998765 332 2467999999987654 45666
Q ss_pred hhc-cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC--CCceeeee----------cCCcceEEeccCceEe
Q 046254 153 GRL-VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP--PNSFTIKL----------NGQRGCINDCGSVLTV 214 (321)
Q Consensus 153 ~~~-~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~--~~~~~i~~----------~~~~~~iiDSGTt~~~ 214 (321)
..+ .+++||+||.+. ..|.|+||++|+.+ +++++. ...|.++. .....+||||||++++
T Consensus 145 ~~~i~~~~FS~~L~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~ 221 (323)
T 1izd_A 145 KSSLSEPIFAVALKHN---APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLL 221 (323)
T ss_dssp GGGSSSSEEEEECCTT---SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETTEEECCCEEEEECTTCCSEE
T ss_pred HHhccCcEEEEEccCC---CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECCcccCCCceEEEeCCCccee
Confidence 654 458999999873 58999999999864 466663 35676642 2345799999999999
Q ss_pred echHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEEE-Eec
Q 046254 215 IECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFF-FGP 293 (321)
Q Consensus 215 lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~~-~~~ 293 (321)
||++++++|.+++.... +..... ....+|+ ..+|+|+|+|+|.+++||+++|++...++..|++ +..
T Consensus 222 lp~~~~~~i~~~i~ga~--~~~~~g----~~~~~C~------~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~~~i~~ 289 (323)
T 1izd_A 222 LDDSIVDAYYEQVNGAS--YDSSQG----GYVFPSS------ASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQS 289 (323)
T ss_dssp ECHHHHHHHHTTSTTCE--EETTTT----EEEEETT------CCCCCEEEEETTEEEEECHHHHEEEECSTTEEEESEEE
T ss_pred CCHHHHHHHHHhCCCcE--EcCcCC----EEEEECC------CCCceEEEEECCEEEecCHHHeEEecCCCCeEEEEEEc
Confidence 99999999988774221 000011 1234565 3589999999777999999999988654578997 554
Q ss_pred CCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 294 AFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 294 ~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
. ...+.||||+.|||++|+|||++|.
T Consensus 290 ~--~~~~~~IlG~~fl~~~y~vfD~~~~ 315 (323)
T 1izd_A 290 N--SGIGFSIFGDVFLKSQYVVFDASGP 315 (323)
T ss_dssp C--TTTSSEEECHHHHTTEEEEEETTTT
T ss_pred C--CCCCcEEEChHHhcCEEEEEECCCC
Confidence 4 2346899999999999999999974
No 17
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-49 Score=364.44 Aligned_cols=275 Identities=16% Similarity=0.174 Sum_probs=219.7
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG 82 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~ 82 (321)
..+..|+++|.|| +|++.|++||||+++||+|+.|..|.++.++.|||++|+ ++. +.|.|.
T Consensus 11 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~----------------~~~~~~ 71 (325)
T 1ibq_A 11 NNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKL----------------SGYSWD 71 (325)
T ss_dssp TTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EEC----------------TTCBEE
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-Ccc----------------CCCEEE
Confidence 4678999999999 899999999999999999999998776778899999998 442 258999
Q ss_pred EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCccccc-ccCcceEEeeCCCCCc---------hHHHh
Q 046254 83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQ-KKIIAGIMGLNWDSTS---------FMVQL 152 (321)
Q Consensus 83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~-~~~~~GIlGLg~~~~s---------~~~ql 152 (321)
+.|++|+.++|.+++|+|+++ + +.++++.|||++.+.+ .+. ....+||||||++..+ ++.||
T Consensus 72 i~Yg~Gs~~~G~~~~D~v~ig-~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 143 (325)
T 1ibq_A 72 ISYGDGSSASGDVYRDTVTVG-G-----VTTNKQAVEAASKISS--EFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTV 143 (325)
T ss_dssp EECSSSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEECH--HHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred EEeCCCCEEEEEEEEeEEEEC-C-----EEEcceEEEEEEecCc--cccccCCCceEEEeCcccccccCcCCCCCHHHHH
Confidence 999999989999999999999 7 8999999999998765 332 2468999999987654 56777
Q ss_pred hhc-cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC--CCceeeee-----------cCCcceEEeccCceE
Q 046254 153 GRL-VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP--PNSFTIKL-----------NGQRGCINDCGSVLT 213 (321)
Q Consensus 153 ~~~-~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~--~~~~~i~~-----------~~~~~~iiDSGTt~~ 213 (321)
..+ .+++||+||.+. ..|.|+||++|+.+ +++++. ...|.++. .....+||||||+++
T Consensus 144 ~~~i~~~~FS~~l~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 220 (325)
T 1ibq_A 144 KSQLDSPLFAVQLKHD---APGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLI 220 (325)
T ss_dssp GGGSSSSEEEEEEETT---EEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSE
T ss_pred HHhcCCcEEEEEecCC---CCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCCcE
Confidence 665 368999999873 58999999999753 566763 35676542 234579999999999
Q ss_pred eechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC-C-eEEEEE
Q 046254 214 VIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ-D-SFFFFF 291 (321)
Q Consensus 214 ~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~-~-~~C~~~ 291 (321)
+||+++|++|.+++.... +.... + ....+|+ ..+|+|+|+|+|.+++||+++|++...+ + ..|++.
T Consensus 221 ~lP~~~~~~i~~~i~~a~--~~~~~--g--~~~~~C~------~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~ 288 (325)
T 1ibq_A 221 LLDDEIVSAYYEQVSGAQ--ESYEA--G--GYVFSCS------TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGG 288 (325)
T ss_dssp EECHHHHHHHHTTSTTCB--CCSSS--S--SCEEETT------CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEES
T ss_pred eCCHHHHHHHHHhCCCce--EcCcC--C--eEEEEcC------CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEE
Confidence 999999999998874321 11111 1 1334676 2579999999777999999999987633 3 689974
Q ss_pred -ecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 292 -GPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 292 -~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
... ...+.||||+.|||++|+|||++|.
T Consensus 289 i~~~--~~~~~~iLG~~fl~~~y~vfD~~~~ 317 (325)
T 1ibq_A 289 IQSN--SGLGLSILGDVFLKSQYVVFNSEGP 317 (325)
T ss_dssp EEEC--TTTCSEEECHHHHTTEEEEEETTTT
T ss_pred EEcC--CCCCceEEChHHhcCEEEEEECCCC
Confidence 443 2346899999999999999999974
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.2e-49 Score=366.47 Aligned_cols=272 Identities=22% Similarity=0.307 Sum_probs=217.8
Q ss_pred cccCceEEEEEEecCCCcEEEEEEEcCCCceeEe-----CCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCC
Q 046254 2 FTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQ-----CQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFE 76 (321)
Q Consensus 2 ~~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~-----~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~ 76 (321)
...+..|+++|.||||||++.|++||||+++||+ |..|..|. .++.|+|++|+||+.+.
T Consensus 8 ~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~-------------- 71 (339)
T 3fv3_A 8 INEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCK--SSGTFTPSSSSSYKNLG-------------- 71 (339)
T ss_dssp EECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTT--TTCCBCGGGCTTCEEEE--------------
T ss_pred EcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCC--CCCcCCCccCcceeeCC--------------
Confidence 3457789999999999999999999999999998 65566776 36799999999999975
Q ss_pred CCceEEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc---------
Q 046254 77 GDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS--------- 147 (321)
Q Consensus 77 ~~~~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s--------- 147 (321)
|.|.+.|++|+.++|.+++|+|+|+ + +.++++.|||++...+ .+||||||++..+
T Consensus 72 --~~~~i~Yg~gs~~~G~~~~D~v~~g-~-----~~v~~~~fg~~~~~~~--------~~GilGLg~~~~~~~~~~~~~~ 135 (339)
T 3fv3_A 72 --AAFTIRYGDGSTSQGTWGKDTVTIN-G-----VSITGQQIADVTQTSV--------DQGILGIGYTSNEAVYDTSGRQ 135 (339)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEESS--------SSCEEECSCGGGCCCBCTTSCB
T ss_pred --ceEEEEECCCceEEEEEEEEEEEEC-C-----EEECceEEEEEEecCC--------CceeEEecCccccccccccccc
Confidence 6999999999889999999999999 7 8999999999988755 5999999987643
Q ss_pred -------hHHHhhhc---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecCC-Cceeeee----------cCC
Q 046254 148 -------FMVQLGRL---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL----------NGQ 201 (321)
Q Consensus 148 -------~~~ql~~~---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~----------~~~ 201 (321)
++.||..+ .+++||+||.+.. ...|.|+|||+|+.+ +++++.. ..|.++. ...
T Consensus 136 ~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~ 214 (339)
T 3fv3_A 136 TTPNYDNVPVTLKKQGKIRTNAYSLYLNSPS-AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSFG 214 (339)
T ss_dssp CSCCCCCHHHHHHHTTSCSSSEEEEECCCTT-CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEEE
T ss_pred cCccCCcHHHHHHHCCCCCCceEEEEECCCC-CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecCC
Confidence 77888764 3579999998754 468999999999763 4666543 4566541 123
Q ss_pred cceEEeccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEe-CcEEEeCCCceEE
Q 046254 202 RGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQ-GADLVVEPENVFI 280 (321)
Q Consensus 202 ~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~-g~~~~i~~~~y~~ 280 (321)
..+||||||++++||+++|++|.+++.+.....+... + ....+|+. ..+|+|+|+|+ |.+++||+++|++
T Consensus 215 ~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~--~--~~~~~C~~-----~~~p~i~f~f~~g~~~~v~~~~~~~ 285 (339)
T 3fv3_A 215 DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQ--Y--LYFIDCNT-----DTSGTTVFNFGNGAKITVPNTEYVY 285 (339)
T ss_dssp EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTE--E--EEEECTTC-----CCCSEEEEEETTSCEEEEEGGGGEE
T ss_pred ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccC--c--eEEEecCC-----CCCCcEEEEECCCCEEEECHHHhee
Confidence 4699999999999999999999999975432100011 1 13445654 35799999997 5599999999999
Q ss_pred EcCCCeEEE-EEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 281 FNHQDSFFF-FFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 281 ~~~~~~~C~-~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+..++ .|+ ++.. .+.+|||+.|||++|+|||++|.
T Consensus 286 ~~~~~-~C~~~i~~-----~~~~ilG~~fl~~~y~vfD~~~~ 321 (339)
T 3fv3_A 286 QNGDG-TCLWGIQP-----SDDTILGDNFLRHAYLLYNLDAN 321 (339)
T ss_dssp ECSSS-CEEESEEE-----CSSCEECHHHHTTEEEEEETTTT
T ss_pred eCCCC-eEEEEEEe-----CCcEEeChHHHhCEEEEEECCCC
Confidence 86544 675 5554 24799999999999999999974
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=7e-50 Score=368.34 Aligned_cols=278 Identities=16% Similarity=0.227 Sum_probs=221.4
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC----CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCc
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK----SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDC 79 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~----~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~ 79 (321)
.+..|+++|.||||||++.|++||||+++||+|..|. .|. .++.|+|++|+||+... |
T Consensus 16 ~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~--~~~~y~~~~SsT~~~~~----------------~ 77 (341)
T 3k1w_A 16 MDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHNG----------------T 77 (341)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHH--TSCCBCGGGCTTCEEEE----------------E
T ss_pred cCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCccc--CCCCCCCCcCcCeeECC----------------C
Confidence 4789999999999999999999999999999999998 465 46799999999999854 7
Q ss_pred eEEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc------hHHHhh
Q 046254 80 FYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS------FMVQLG 153 (321)
Q Consensus 80 ~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~ 153 (321)
.|.+.|++|+ ++|.+++|+|+|+ + +.+ ++.|||++...+. .+.....+||||||++..+ ++.+|.
T Consensus 78 ~~~i~Yg~gs-~~G~~~~D~v~ig-~-----~~v-~~~fg~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 148 (341)
T 3k1w_A 78 ELTLRYSTGT-VSGFLSQDIITVG-G-----ITV-TQMFGEVTEMPAL-PFMLAEFDGVVGMGFIEQAIGRVTPIFDNII 148 (341)
T ss_dssp EEEEEETTEE-EEEEEEEEEEEET-T-----EEE-EEEEEEEEECCHH-HHTTCSSSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred EEEEEECCcE-EEEEEEEEEEEEC-C-----cee-eEEEEEEEEcccc-ccccCCcceEEECCchhhcccCCCCHHHHHH
Confidence 9999999998 8999999999999 7 788 9999999987651 1444668999999998764 566666
Q ss_pred hc---cCCceEEeecCCCC---CCcceEEeCCCCCCc-----ceEecC-CCceeeee------------cCCcceEEecc
Q 046254 154 RL---VPDRFSCCLVQPDK---SFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL------------NGQRGCINDCG 209 (321)
Q Consensus 154 ~~---~~~~Fs~~l~~~~~---~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~------------~~~~~~iiDSG 209 (321)
.+ .+++||+||.+... ...|.|+|||+|+.+ +++++. ...|.+.. .....+|||||
T Consensus 149 ~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsG 228 (341)
T 3k1w_A 149 SQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLLCEDGCLALVDTG 228 (341)
T ss_dssp HHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEECTTCEEEEECTT
T ss_pred HCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEeecCCCCEEEEECC
Confidence 54 46899999987631 248999999999764 455654 35565531 23457999999
Q ss_pred CceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeE
Q 046254 210 SVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSF 287 (321)
Q Consensus 210 Tt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~ 287 (321)
|++++||++++++|.+++.+... .. + ...+|... ..+|+|+|+|+|.+++||+++|+++... +..
T Consensus 229 tt~~~lP~~~~~~i~~~~~~~~~----~~--g---~~~~C~~~----~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~ 295 (341)
T 3k1w_A 229 ASYISGSTSSIEKLMEALGAKKR----LF--D---YVVKCNEG----PTLPDISFHLGGKEYTLTSADYVFQESYSSKKL 295 (341)
T ss_dssp CSSEEECHHHHHHHHHHHTCEEC----SS--C---EEEEGGGG----GGCCCEEEEETTEEEEECHHHHBCCSCCCTTSE
T ss_pred CChhcCCHHHHHHHHHHcCCeec----CC--C---eEEeCCCC----CcCCcEEEEECCEEEEECHHHheeEccCCCCCe
Confidence 99999999999999998854321 01 1 23455543 3689999999988999999999987653 578
Q ss_pred EEE-EecCCC--CCCCceeeechheeeeEEEEeCCCC
Q 046254 288 FFF-FGPAFT--PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 288 C~~-~~~~~~--~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
|+. +..... ...+.||||+.|||++|+|||++|.
T Consensus 296 C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 332 (341)
T 3k1w_A 296 CTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNN 332 (341)
T ss_dssp EEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTT
T ss_pred EEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCC
Confidence 995 554211 2246899999999999999999974
No 20
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=8.7e-50 Score=371.76 Aligned_cols=275 Identities=22% Similarity=0.236 Sum_probs=221.5
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK--SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFY 81 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~--~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~ 81 (321)
.+..|+++|.||||+|++.|+|||||+++||+|+.|. .|. .++.|||++|+||+... |.|
T Consensus 60 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~----------------~~~ 121 (375)
T 1miq_A 60 ANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCS--IKNLYDSSKSKSYEKDG----------------TKV 121 (375)
T ss_dssp BCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGG--GSCCBCGGGCTTCEEEE----------------EEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCccccc--CCCcCCCccCCceEECC----------------cEE
Confidence 5678999999999999999999999999999999997 465 46799999999999864 799
Q ss_pred EEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccc----cCCcccccccCcceEEeeCCCCCc------hHHH
Q 046254 82 GITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLE----SKDFVSIQKKIIAGIMGLNWDSTS------FMVQ 151 (321)
Q Consensus 82 ~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~----~~~~~~~~~~~~~GIlGLg~~~~s------~~~q 151 (321)
.+.|++|+ ++|.+++|+|+|+ + +.+++ .|||+.. +.. |.....+||||||++..+ ++.+
T Consensus 122 ~i~Yg~Gs-~~G~~~~Dtv~ig-~-----~~v~~-~Fg~~~~~~~~~~~---f~~~~~dGilGLg~~~~s~~~~~~~~~~ 190 (375)
T 1miq_A 122 DITYGSGT-VKGFFSKDLVTLG-H-----LSMPY-KFIEVTDTDDLEPI---YSSVEFDGILGLGWKDLSIGSIDPIVVE 190 (375)
T ss_dssp EEEETTEE-EEEEEEEEEEEET-T-----EEEEE-EEEEEEECGGGTTH---HHHSCCCEEEECSSCCTTCSSCCCHHHH
T ss_pred EEEeCCCe-EEEEEEEEEEEEc-C-----ceECc-EEEEEEeccccccc---cccCCCceEEeCCCCcccccCCCCHHHH
Confidence 99999999 8999999999999 7 88999 9999988 432 333568999999998754 5666
Q ss_pred hhhc---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC-CCceeeee----c----CCcceEEeccCceEe
Q 046254 152 LGRL---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL----N----GQRGCINDCGSVLTV 214 (321)
Q Consensus 152 l~~~---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~----~----~~~~~iiDSGTt~~~ 214 (321)
|..+ .+++||+||.+.. ..+|.|+|||+|+.. +++++. ...|.+.. . ....+||||||++++
T Consensus 191 l~~qg~i~~~~FS~~L~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~i~v~g~~~~~~~aiiDSGTs~~~ 269 (375)
T 1miq_A 191 LKNQNKIDNALFTFYLPVHD-VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTTTIT 269 (375)
T ss_dssp HHHTTSSSSSEEEEECCTTC-TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEEEEETTEEEEEEEEEECTTBSSEE
T ss_pred HHhccCcCCCEEEEEecCCC-CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEEEEECCEEcccceEEecCCCccEE
Confidence 6654 3689999998864 368999999999763 456654 35565432 1 235799999999999
Q ss_pred echHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeEEE-EE
Q 046254 215 IECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSFFF-FF 291 (321)
Q Consensus 215 lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~-~~ 291 (321)
||+++|++|.+++.+.. +.... .....|+. ..+|+|+|+|+|.+++||+++|+++..+ ...|+ ++
T Consensus 270 lP~~~~~~l~~~~~~~~---~~~~g----~~~~~C~~-----~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~ 337 (375)
T 1miq_A 270 APSEFLNKFFANLNVIK---VPFLP----FYVTTCDN-----KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITM 337 (375)
T ss_dssp ECHHHHHHHHHHHTCEE---CTTSS----CEEEETTC-----TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESE
T ss_pred cCHHHHHHHHHHhCCcc---cCCCC----eEEEECCC-----CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEE
Confidence 99999999999986532 11111 13466775 3589999999888999999999998753 35898 66
Q ss_pred ecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 292 GPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 292 ~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
.... ...+.||||+.|||++|+|||++|.
T Consensus 338 ~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~ 366 (375)
T 1miq_A 338 LPVD-IDSNTFILGDPFMRKYFTVFDYDKE 366 (375)
T ss_dssp EECC-SSSSEEEECHHHHHHEEEEEETTTT
T ss_pred EECC-CCCCcEEECHHHhccEEEEEECCCC
Confidence 6551 1136899999999999999999974
No 21
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.3e-49 Score=364.79 Aligned_cols=276 Identities=13% Similarity=0.137 Sum_probs=220.3
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK--SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFY 81 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~--~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~ 81 (321)
.+..|+++|.|| +|++.|++||||+++||+|+.|. .|....++.|||++| ||+... |.|
T Consensus 15 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~----------------~~~ 75 (330)
T 1yg9_A 15 INTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG----------------NVQ 75 (330)
T ss_dssp ECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE----------------EEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC----------------CEE
Confidence 467899999999 89999999999999999999997 585456789999999 999854 689
Q ss_pred EEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc-------hHHHhhh
Q 046254 82 GITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS-------FMVQLGR 154 (321)
Q Consensus 82 ~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s-------~~~ql~~ 154 (321)
.+.|++|+ ++|.+++|+|+++ + +.++++.|||++.+.. .|.....+||||||++..+ ++.+|..
T Consensus 76 ~i~Yg~Gs-~~G~~~~Dtv~ig-~-----~~~~~~~fg~~~~~~~--~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~ 146 (330)
T 1yg9_A 76 VKFFDTGS-AVGRGIEDSLTIS-Q-----LTTSQQDIVLADELSQ--EVCILSADVVVGIAAPGCPNALKGKTVLENFVE 146 (330)
T ss_dssp EEETTTEE-EEEEEEEEEEEET-T-----EEEEEEEEEEEEEECT--HHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHH
T ss_pred EEEECCce-EEEEEEEEEEEEC-C-----EEEcCeEEEEEEEccc--ccccccCceEEEcCcchhccccCCCCHHHHHHh
Confidence 99999998 6999999999999 7 8999999999998743 3544578999999998776 6677765
Q ss_pred c--cCCceEEeecCCCC-CCcceEEeCCCCCCc-----ceEecC-CCceeeee-----------cCCcceEEeccCceEe
Q 046254 155 L--VPDRFSCCLVQPDK-SFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL-----------NGQRGCINDCGSVLTV 214 (321)
Q Consensus 155 ~--~~~~Fs~~l~~~~~-~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~-----------~~~~~~iiDSGTt~~~ 214 (321)
+ ++++||+||.+... ...|.|+||++|+.+ +++++. ...|.++. .....+||||||++++
T Consensus 147 qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~ 226 (330)
T 1yg9_A 147 ENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIV 226 (330)
T ss_dssp TTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEECTTCEEEECTTCSSEE
T ss_pred cCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEcCCCcEEEEecCCcccc
Confidence 3 47899999987531 238999999999763 466664 35665541 2346799999999999
Q ss_pred echHHHHHHHHHHHHHhccCCcccccccCCC-ccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEEE-Ee
Q 046254 215 IECEVYAVLTAEFIDYFSQHDIEKLFTCRKC-GVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFF-FG 292 (321)
Q Consensus 215 lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~~-~~ 292 (321)
||++++++|.+++.+... .... ... ..+|... ..+|+|+|+|+|.+++||+++|+++. +..|+. +.
T Consensus 227 lP~~~~~~l~~~~~~~~~----~~g~--~~~~~~~C~~~----~~~p~i~f~fgg~~~~l~~~~y~~~~--~~~C~~~i~ 294 (330)
T 1yg9_A 227 GPKAYVNPINEAIGCVVE----KTTT--RRICKLDCSKI----PSLPDVTFVINGRNFNISSQYYIQQN--GNLCYSGFQ 294 (330)
T ss_dssp EEHHHHHHHHHHHTCEEE----ECSS--CEEEEECGGGG----GGSCCEEEEETTEEEEECHHHHEEEE--TTEEEESEE
T ss_pred CCHHHHHHHHHHhCCccc----CCCc--eEEEEEECCCc----cccCcEEEEECCEEEEECHHHhcccC--CCcEEEEEE
Confidence 999999999999854321 0000 002 3446543 35899999998789999999999987 468985 55
Q ss_pred cCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 293 PAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 293 ~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
.. ...+.||||+.|||++|+|||++|.
T Consensus 295 ~~--~~~~~~ilG~~fl~~~y~vfD~~~~ 321 (330)
T 1yg9_A 295 PC--GHSDHFFIGDFFVDHYYSEFNWENK 321 (330)
T ss_dssp EE--TTCSSEEECHHHHTTEEEEEETTTT
T ss_pred eC--CCCCeEEecHHHhhheEEEEECCCC
Confidence 43 2346899999999999999999974
No 22
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.2e-49 Score=369.59 Aligned_cols=276 Identities=15% Similarity=0.196 Sum_probs=221.6
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC---CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCce
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK---SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCF 80 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~---~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~ 80 (321)
.+..|+++|.||||+|++.|++||||+++||+|+.|. .|.. ++.|+|++|+||+... |.
T Consensus 16 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~--~~~y~~~~SsT~~~~~----------------~~ 77 (361)
T 1mpp_A 16 DLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG--KRFFDPSSSSTFKETD----------------YN 77 (361)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS--SCCBCGGGCTTCEEEE----------------EE
T ss_pred CCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC--CCcCCCccCCceEecC----------------Ce
Confidence 4789999999999999999999999999999999998 6864 6799999999999865 78
Q ss_pred EEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCC-----cccccccCcceEEeeCCCCCc--------
Q 046254 81 YGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKD-----FVSIQKKIIAGIMGLNWDSTS-------- 147 (321)
Q Consensus 81 ~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~-----~~~~~~~~~~GIlGLg~~~~s-------- 147 (321)
|.+.|++|+ ++|.+++|+|+|+ + +.++++.|||++.+.+ . .+.....+||||||++.++
T Consensus 78 ~~i~Yg~Gs-~~G~~~~D~v~~g-~-----~~v~~~~fg~~~~~~~~~~~~~-~~~~~~~~GilGLg~~~~s~~~~~~~~ 149 (361)
T 1mpp_A 78 LNITYGTGG-ANGIYFRDSITVG-G-----ATVKQQTLAYVDNVSGPTAEQS-PDSELFLDGIFGAAYPDNTAMEAEYGD 149 (361)
T ss_dssp EEEECSSCE-EEEEEEEEEEEET-T-----EEEEEEEEEEEEEEESGGGSSC-TTCSSCCCEEEECSCGGGSHHHHHHSC
T ss_pred EEEEECCce-EEEEEEEEEEEEC-C-----EEEeceEEEEEEeccCcccccc-ccccCCCCCEEEeCCcccccccccccc
Confidence 999999999 8999999999999 7 8999999999988753 1 2434578999999998655
Q ss_pred ----hHHHhhhc---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecCC-C----ceeeee------------
Q 046254 148 ----FMVQLGRL---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLPP-N----SFTIKL------------ 198 (321)
Q Consensus 148 ----~~~ql~~~---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~~-~----~~~i~~------------ 198 (321)
++.+|..+ .+++||+||.+. ...|.|+||++|+.+ +++++.. . .|.+..
T Consensus 150 ~~~~~~~~l~~~g~i~~~~FS~~l~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~ 227 (361)
T 1mpp_A 150 TYNTVHVNLYKQGLISSPVFSVYMNTN--DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVS 227 (361)
T ss_dssp CCCCHHHHHHHTTSSSSSEEEEECCCS--SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEE
T ss_pred cCCCHHHHHHHcCCCCCcEEEEEecCC--CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeecc
Confidence 44466554 368999999885 468999999999753 4555532 2 565531
Q ss_pred cCCcceE-EeccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCC-CeEEEEE--e-----Cc
Q 046254 199 NGQRGCI-NDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSF-PSMTYHF--Q-----GA 269 (321)
Q Consensus 199 ~~~~~~i-iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~-P~i~~~f--~-----g~ 269 (321)
.....+| |||||++++||+++|++|.+++.+.. +.... .....|+.. ..+ |+|+|+| + |.
T Consensus 228 ~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~---~~~~g----~~~~~C~~~----~~~~p~i~f~f~~g~~~~~g~ 296 (361)
T 1mpp_A 228 FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA---TESQQ----GYTVPCSKY----QDSKTTFSLVLQKSGSSSDTI 296 (361)
T ss_dssp EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC---EEETT----EEEEEHHHH----TTCCCEEEEEEECTTCSSCEE
T ss_pred CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc---cCCCC----cEEEECCCc----ccCCCcEEEEEEcCCcCCCCe
Confidence 1235689 99999999999999999999986532 11111 134678764 356 9999999 5 45
Q ss_pred EEEeCCCceEEEcCC-CeEEE-EEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 270 DLVVEPENVFIFNHQ-DSFFF-FFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 270 ~~~i~~~~y~~~~~~-~~~C~-~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+++||+++|+++... +..|+ ++... ..+.||||+.|||++|+|||++|.
T Consensus 297 ~~~i~~~~y~~~~~~~~~~C~~~i~~~---~~~~~iLG~~fl~~~yvvfD~~~~ 347 (361)
T 1mpp_A 297 DVSVPISKMLLPVDKSGETCMFIVLPD---GGNQFIVGNLFLRFFVNVYDFGKN 347 (361)
T ss_dssp EEEEEGGGGEEECSSSSCEEEESEEEE---SSSCCEEEHHHHTTEEEEEETTTT
T ss_pred EEEECHHHhEEecCCCCCeeEEEEEeC---CCCCEEEChHHhccEEEEEECCCC
Confidence 999999999998764 46898 56653 246899999999999999999974
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7.7e-50 Score=378.66 Aligned_cols=279 Identities=18% Similarity=0.231 Sum_probs=220.2
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEEE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGI 83 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~~ 83 (321)
.+..|+++|.||||||++.|++||||+++||+|+.|..+.+..++.|||++|+||+... |.|.+
T Consensus 136 ~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~----------------~~~~i 199 (453)
T 2bju_A 136 QNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG----------------TKVEM 199 (453)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE----------------EEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC----------------cEEEE
Confidence 56799999999999999999999999999999999974332347899999999999864 79999
Q ss_pred EECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccC--CcccccccCcceEEeeCCCCC------chHHHhhhc
Q 046254 84 TYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESK--DFVSIQKKIIAGIMGLNWDST------SFMVQLGRL 155 (321)
Q Consensus 84 ~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~--~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~ 155 (321)
.|++|+ ++|.+++|+|+++ + +.++ +.|||++.+. +. .+.....+||||||++.. +++.+|..+
T Consensus 200 ~YgdGs-~~G~~~~Dtv~ig-~-----~~v~-~~Fg~a~~~~~~g~-~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~q 270 (453)
T 2bju_A 200 NYVSGT-VSGFFSKDLVTVG-N-----LSLP-YKFIEVIDTNGFEP-TYTASTFDGILGLGWKDLSIGSVDPIVVELKNQ 270 (453)
T ss_dssp ECSSSE-EEEEEEEEEEEET-T-----EEEE-EEEEEEEECGGGTT-HHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHT
T ss_pred EcCCCC-eEEEEEEEEEEEe-C-----cEEE-EEEEEEEEecccCc-cccccCCceeEeccCCcccccCCCcHHHHHHHC
Confidence 999999 8999999999999 7 7888 9999999876 41 243457899999998765 355666654
Q ss_pred ---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC-CCceeeeec--------CCcceEEeccCceEeechH
Q 046254 156 ---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKLN--------GQRGCINDCGSVLTVIECE 218 (321)
Q Consensus 156 ---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~~--------~~~~~iiDSGTt~~~lp~~ 218 (321)
..++||+||.+.+ ..+|.|+|||+|+.. +++++. ...|.+... ....+||||||++++||++
T Consensus 271 g~i~~~~FS~~L~~~~-~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~I~Vgg~~~~~~~aIiDSGTsl~~lP~~ 349 (453)
T 2bju_A 271 NKIENALFTFYLPVHD-KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLDAHVGNIMLEKANCIVDSGTSAITVPTD 349 (453)
T ss_dssp TSSSSCEEEEECCBTT-TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEEEEETTEEEEEEEEEECTTCCSEEECHH
T ss_pred CCCCCCEEEEEeCCCC-CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEEEEECcEEeccccEEEcCCCCeEecCHH
Confidence 3689999998863 468999999999763 344442 245554321 2357999999999999999
Q ss_pred HHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeEEE-EEecCC
Q 046254 219 VYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSFFF-FFGPAF 295 (321)
Q Consensus 219 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~-~~~~~~ 295 (321)
+|++|.+++.+. +...+. ....+|+. ..+|+|+|+|+|.+++|||++|+++..+ +..|+ ++....
T Consensus 350 ~~~~l~~~i~~~----~~~~g~---~~~v~C~~-----~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~ 417 (453)
T 2bju_A 350 FLNKMLQNLDVI----KVPFLP---FYVTLCNN-----SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLD 417 (453)
T ss_dssp HHHHHTTTSSCE----ECTTSS---CEEEETTC-----TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECEEECC
T ss_pred HHHHHHHHhCCc----ccCCCc---eEEEecCC-----CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEEEEEeCC
Confidence 999998877442 111110 13456765 3589999999888999999999998764 46898 465541
Q ss_pred CCCCCceeeechheeeeEEEEeCCCC
Q 046254 296 TPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 296 ~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
...+.||||+.|||++|+|||++|.
T Consensus 418 -~~~~~~ILGd~Flr~~yvVFD~~n~ 442 (453)
T 2bju_A 418 -FPVPTFILGDPFMRKYFTVFDYDNH 442 (453)
T ss_dssp -CSSCEEEECHHHHHHEEEEEETTTT
T ss_pred -CCCCCEEECHHHhhcEEEEEECCCC
Confidence 1135899999999999999999974
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.5e-49 Score=366.34 Aligned_cols=272 Identities=19% Similarity=0.278 Sum_probs=214.3
Q ss_pred cccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCC--CC---------CCCCCCCCCccCCCCCccceeeCCCCCCCC
Q 046254 2 FTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQP--CK---------SCYEQNDPIYNSRSFKSYKKLPCYDASCKS 70 (321)
Q Consensus 2 ~~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~--C~---------~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~ 70 (321)
...+..|+++|.||||||++.|++||||+++||+|+. |. .|. .++.|+|++|+||+...
T Consensus 8 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~--~~~~y~~~~SsT~~~~~-------- 77 (342)
T 3pvk_A 8 HNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCK--QKGTYDPSGSSASQDLN-------- 77 (342)
T ss_dssp EECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGG--TTCCBCGGGCTTCEEEE--------
T ss_pred ecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCC--CCCcCCCccCcceeecC--------
Confidence 3467899999999999999999999999999998654 63 354 46799999999999975
Q ss_pred CCCCCCCCceEEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCC-----
Q 046254 71 PFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDS----- 145 (321)
Q Consensus 71 ~~~c~~~~~~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~----- 145 (321)
|.|.+.|++|+.++|.+++|+|+|+ + +.++++.|||++.... .+||||||++.
T Consensus 78 --------~~~~i~Yg~gs~~~G~~~~D~v~ig-~-----~~v~~~~fg~~~~~~~--------~~GilGLg~~~~~~~~ 135 (342)
T 3pvk_A 78 --------TPFKIGYGDGSSSQGTLYKDTVGFG-G-----VSIKNQVLADVDSTSI--------DQGILGVGYKTNEAGG 135 (342)
T ss_dssp --------EEEEEECSSSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEESS--------SSCEEECSCGGGCSSC
T ss_pred --------CeEEEEecCCCeEEEEEEEEEEEEC-C-----EEecceEEEEEEccCC--------CccEEEecCccccccc
Confidence 6899999999889999999999999 7 8999999999987643 69999999987
Q ss_pred --CchHHHhhhc---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecCC-Cceeeee-----------cCCcc
Q 046254 146 --TSFMVQLGRL---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL-----------NGQRG 203 (321)
Q Consensus 146 --~s~~~ql~~~---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~-----------~~~~~ 203 (321)
.+++.+|..+ .+++||+||.+.. ...|.|+|||+|+.+ +++++.. ..|.+.. .....
T Consensus 136 ~~~~~~~~L~~qg~i~~~~fs~~l~~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~ 214 (342)
T 3pvk_A 136 SYDNVPVTLKKQGVIAKNAYSLYLNSPD-AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINTDNVD 214 (342)
T ss_dssp SSCCHHHHHHHTTSSSSSEEEEECCCTT-CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEEEEEE
T ss_pred cCCcHHHHHHhcCCCCCceEEEEeCCCC-CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecCCCce
Confidence 4688888775 3579999998754 468999999999764 4566543 4565541 11257
Q ss_pred eEEeccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeC-cEEEeCCCceEEEc
Q 046254 204 CINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQG-ADLVVEPENVFIFN 282 (321)
Q Consensus 204 ~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g-~~~~i~~~~y~~~~ 282 (321)
+||||||++++||+++|++|.+++.+.... .. ....+|..+|. ..|+|+|+|++ .+++||+++|+++.
T Consensus 215 ~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~----~~-----~~~~~~~~~C~--~~p~i~f~f~~g~~~~vp~~~~~~~~ 283 (342)
T 3pvk_A 215 VLLDSGTTITYLQQDLADQIIKAFNGKLTQ----DS-----NGNSFYEVDCN--LSGDVVFNFSKNAKISVPASEFAASL 283 (342)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHTTCEEEE----CT-----TSCEEEEECSC--CCSEEEEEESTTCEEEEEGGGGEEC-
T ss_pred EEEeCCCCCeecCHHHHHHHHHHcCCeecc----cC-----CCceEEEEecC--CCCceEEEECCCCEEEEcHHHheeec
Confidence 999999999999999999999998654311 00 01122333332 35999999994 59999999999873
Q ss_pred C--CC---eEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 283 H--QD---SFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 283 ~--~~---~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
. ++ ..|+..+.. .+.+|||+.|||++|+|||++|+
T Consensus 284 ~~~~g~~~~~C~~~i~~----~~~~ilG~~fl~~~y~vfD~~~~ 323 (342)
T 3pvk_A 284 QGDDGQPYDKCQLLFDV----NDANILGDNFLRSAYIVYDLDDN 323 (342)
T ss_dssp ---------CEEESEEE----CTTCEECHHHHTTEEEEEETTTT
T ss_pred cccCCCcCCeeEEEEee----CCCeEeCHHHHhcEEEEEECCCC
Confidence 2 23 679865554 25799999999999999999974
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.7e-49 Score=363.10 Aligned_cols=275 Identities=16% Similarity=0.186 Sum_probs=218.8
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG 82 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~ 82 (321)
..+..|+++|.|| +|++.|++||||+++||+|+.|..|..+.++.|||++|+ ++.. .|.|.
T Consensus 12 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~----------------~~~~~ 72 (323)
T 1bxo_A 12 ANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELS----------------GYTWS 72 (323)
T ss_dssp GGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEE----------------EEEEE
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccC----------------CCeEE
Confidence 4678899999999 899999999999999999999998876778899999998 5542 48999
Q ss_pred EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccc-cCcceEEeeCCCCCc---------hHHHh
Q 046254 83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQK-KIIAGIMGLNWDSTS---------FMVQL 152 (321)
Q Consensus 83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~-~~~~GIlGLg~~~~s---------~~~ql 152 (321)
+.|++|+.++|.+++|+|+++ + +.++++.|||++.+.+ .+.. ...+||||||++..+ ++.+|
T Consensus 73 i~Yg~Gs~~~G~~~~D~v~ig-~-----~~v~~~~fg~~~~~~~--~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 144 (323)
T 1bxo_A 73 ISYGDGSSASGNVFTDSVTVG-G-----VTAHGQAVQAAQQISA--QFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTV 144 (323)
T ss_dssp EECTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEECH--HHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred EEeCCCCeEEEEEEEEEEEEC-C-----EEECcEEEEEEEecCc--ccccCCCCceEEEeCcccccccccCCCCCHHHHH
Confidence 999999989999999999999 7 8999999999998765 3322 467999999987543 55666
Q ss_pred hhc-cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC--CCceeeeec---------CCcceEEeccCceEee
Q 046254 153 GRL-VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP--PNSFTIKLN---------GQRGCINDCGSVLTVI 215 (321)
Q Consensus 153 ~~~-~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~--~~~~~i~~~---------~~~~~iiDSGTt~~~l 215 (321)
..+ .+++||+||.+. ..|.|+||++|+.+ +++++. ...|.++.. ....+||||||++++|
T Consensus 145 ~~~i~~~~FS~~L~~~---~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~l 221 (323)
T 1bxo_A 145 KSSLAQPLFAVALKHQ---QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLL 221 (323)
T ss_dssp GGGBSSSEEEEECCSS---SCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEE
T ss_pred HHhcCCcEEEEEEeCC---CCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECCccCCCceEEEeCCCCceeC
Confidence 654 458999999873 58999999999753 567763 356766521 2357999999999999
Q ss_pred chHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC-CeEEEE-Eec
Q 046254 216 ECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ-DSFFFF-FGP 293 (321)
Q Consensus 216 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~-~~~C~~-~~~ 293 (321)
|++++++|.+++.... +.... + ....+|+ ..+|+|+|+|+|.+++||+++|++...+ ...|++ +..
T Consensus 222 P~~~~~~l~~~i~~a~--~~~~~--g--~~~~~C~------~~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~~i~~ 289 (323)
T 1bxo_A 222 DDSVVSQYYSQVSGAQ--QDSNA--G--GYVFDCS------TNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQS 289 (323)
T ss_dssp CHHHHHHHHTTSTTCE--EETTT--T--EEEECTT------CCCCCEEEEETTEEEEECHHHHEEEECSSSSCEEESEEE
T ss_pred CHHHHHHHHHhCCCce--EcCcC--C--EEEEECC------CCCceEEEEECCEEEEECHHHeEEeccCCCCeEEEEEEC
Confidence 9999999988874321 01011 1 1234565 3589999999777999999999987644 368997 444
Q ss_pred CCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 294 AFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 294 ~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
. ...+.||||+.|||++|+|||++|.
T Consensus 290 ~--~~~~~~ILG~~fl~~~y~vfD~~~~ 315 (323)
T 1bxo_A 290 N--SGIGFSIFGDIFLKSQYVVFDSDGP 315 (323)
T ss_dssp C--TTCSSEEECHHHHTTEEEEEETTTT
T ss_pred C--CCCCcEEEChHHHcCEEEEEECCCC
Confidence 4 2346899999999999999999974
No 26
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.3e-48 Score=373.56 Aligned_cols=292 Identities=18% Similarity=0.266 Sum_probs=219.2
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC---CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCce
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK---SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCF 80 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~---~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~ 80 (321)
.+..|+++|.||||||++.|+|||||+++||+|..|. .|.. ++.|||++|+||+.. +|.
T Consensus 50 ~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~--~~~y~~~~SsT~~~~----------------~~~ 111 (478)
T 1qdm_A 50 MNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL--HSRYKAGASSTYKKN----------------GKP 111 (478)
T ss_dssp GGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG--SCCBCGGGCTTCBCC----------------CCE
T ss_pred cCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC--CCCCCcccCCCeeeC----------------CcE
Confidence 5678999999999999999999999999999999996 5864 578999999999874 478
Q ss_pred EEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCch------HHHhhh
Q 046254 81 YGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSF------MVQLGR 154 (321)
Q Consensus 81 ~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s~------~~ql~~ 154 (321)
|.+.|++|+ ++|.+++|+|+|+ + +.++++.|||++.+.+. .|.....+||||||++.++. +.+|..
T Consensus 112 ~~i~Yg~Gs-~~G~~~~Dtv~ig-~-----~~v~~~~Fg~a~~~~~~-~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~ 183 (478)
T 1qdm_A 112 AAIQYGTGS-IAGYFSEDSVTVG-D-----LVVKDQEFIEATKEPGI-TFLVAKFDGILGLGFKEISVGKAVPVWYKMIE 183 (478)
T ss_dssp EEEEETTEE-EEEEEEEEEEEET-T-----EEEEEEEEEEEEECCBS-HHHHCSSSEEEECSCGGGCGGGCCCHHHHHTT
T ss_pred EEEEcCCCC-eEEEEEEEEEEEC-C-----eEECCEEEEEEEecCCc-ccccccccceecccccccccCCCCcHHHHHHH
Confidence 999999998 8999999999999 7 89999999999887652 34345689999999987763 345544
Q ss_pred c---cCCceEEeecCCC-CCCcceEEeCCCCCCc-----ceEecC-CCceeeee-------------cCCcceEEeccCc
Q 046254 155 L---VPDRFSCCLVQPD-KSFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL-------------NGQRGCINDCGSV 211 (321)
Q Consensus 155 ~---~~~~Fs~~l~~~~-~~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~-------------~~~~~~iiDSGTt 211 (321)
+ .+++||+||.+.. ...+|.|+|||+|+.. +++++. ...|.+.. .....+||||||+
T Consensus 184 qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs 263 (478)
T 1qdm_A 184 QGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTS 263 (478)
T ss_dssp TTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETTEECSTTTTCEEEEECSSCC
T ss_pred CCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECCEEEeecCCCceEEEcCCCC
Confidence 3 3589999998752 2358999999999864 455543 35565431 1245799999999
Q ss_pred eEeechHHHHHHHHHHHHHh----------------------ccCCcc-----------cc-----------ccc-----
Q 046254 212 LTVIECEVYAVLTAEFIDYF----------------------SQHDIE-----------KL-----------FTC----- 242 (321)
Q Consensus 212 ~~~lp~~~~~~l~~~~~~~~----------------------~~~~~~-----------~~-----------~~~----- 242 (321)
+++||+++|++|.+++.+.. ...+.. .. .+.
T Consensus 264 ~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~ 343 (478)
T 1qdm_A 264 LLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKS 343 (478)
T ss_dssp SEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-----------------------
T ss_pred ceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccccccccccc
Confidence 99999999999999885420 000000 00 000
Q ss_pred ---------------------------------CCCccceEecCC---------C-CCCCCeEEEEEeCcEEEeCCCceE
Q 046254 243 ---------------------------------RKCGVTCFNLPA---------R-FNSFPSMTYHFQGADLVVEPENVF 279 (321)
Q Consensus 243 ---------------------------------~~~~~~C~~~~~---------~-~~~~P~i~~~f~g~~~~i~~~~y~ 279 (321)
......|+..+. . ...+|+|+|+|+|..++|+|++|+
T Consensus 344 ~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~gg~~~~l~p~~yi 423 (478)
T 1qdm_A 344 NGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYI 423 (478)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEEEEETTEEEEECHHHHE
T ss_pred ccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEEEEECCEEEEEChHHhE
Confidence 000123433322 1 246899999998889999999999
Q ss_pred EEcCC--CeEEEE-EecCCC--CCCCceeeechheeeeEEEEeCCCC
Q 046254 280 IFNHQ--DSFFFF-FGPAFT--PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 280 ~~~~~--~~~C~~-~~~~~~--~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+.... +..|++ |..... +.++.||||++|||++|+|||++|.
T Consensus 424 ~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~ 470 (478)
T 1qdm_A 424 LKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKL 470 (478)
T ss_dssp EECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTT
T ss_pred EEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCC
Confidence 98765 358996 544321 2346899999999999999999974
No 27
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=6.3e-49 Score=372.74 Aligned_cols=275 Identities=19% Similarity=0.244 Sum_probs=220.8
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK--SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFY 81 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~--~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~ 81 (321)
.+..|+++|.||||||++.|++||||+++||+|+.|. .|. .++.|||++|+||+... |.|
T Consensus 135 ~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~--~~~~ydps~SsT~~~~~----------------~~f 196 (451)
T 3qvc_A 135 ANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCE--SKNHYDSSKSKTYEKDD----------------TPV 196 (451)
T ss_dssp BCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGT--TSCCBCGGGCTTCEEEE----------------EEE
T ss_pred CCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccC--CCCCCCCCCCcccccCC----------------CEE
Confidence 4678999999999999999999999999999999996 575 46799999999999864 799
Q ss_pred EEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccc----cCCcccccccCcceEEeeCCCCC------chHHH
Q 046254 82 GITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLE----SKDFVSIQKKIIAGIMGLNWDST------SFMVQ 151 (321)
Q Consensus 82 ~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~----~~~~~~~~~~~~~GIlGLg~~~~------s~~~q 151 (321)
.+.|++|+ ++|.+++|+|+++ + +.++ +.|||++. ..+ +.....+||||||++.. +++.+
T Consensus 197 ~i~YgdGs-~~G~~~~Dtv~ig-g-----~~v~-~~Fg~a~~t~~~~~~---f~~~~~dGILGLg~~~~s~~~~~~~~~~ 265 (451)
T 3qvc_A 197 KLTSKAGT-ISGIFSKDLVTIG-K-----LSVP-YKFIEMTEIVGFEPF---YSESDVDGVFGLGWKDLSIGSIDPYIVE 265 (451)
T ss_dssp EEECSSEE-EEEEEEEEEEEET-T-----EEEE-EEEEEEEEEEECTTH---HHHSCCCEEEECSSBCSSSSCCCCHHHH
T ss_pred EEEECCCE-EEEEEEEEEEEEC-C-----EEEE-EEEEEEEeccccCCC---ccCCCCCEEEecCCCcccccCCCCHHHH
Confidence 99999999 9999999999999 7 7888 99999988 443 32356799999998764 56777
Q ss_pred hhhc---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecCC-Cceeeeec--------CCcceEEeccCceEe
Q 046254 152 LGRL---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKLN--------GQRGCINDCGSVLTV 214 (321)
Q Consensus 152 l~~~---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~~--------~~~~~iiDSGTt~~~ 214 (321)
|..+ .+++||+||.+.. ..+|.|+|||+|+.. +++++.. ..|.+... ....+||||||++++
T Consensus 266 L~~qg~I~~~~FS~~L~~~~-~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~I~Vgg~~~~~~~aiiDSGTt~i~ 344 (451)
T 3qvc_A 266 LKTQNKIEQAVYSIYLPPEN-KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSATSVIT 344 (451)
T ss_dssp HHHTTSSSSSEEEEECCTTC-TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEEEEETTEEEEEEEEEECTTBSSEE
T ss_pred HHHcCCCCCCEEEEEEcCCC-CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEEEEECCccCCCceEEEeCCCcccc
Confidence 7664 3679999999864 468999999999864 4566543 55655422 345699999999999
Q ss_pred echHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeEEEE-E
Q 046254 215 IECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSFFFF-F 291 (321)
Q Consensus 215 lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~~-~ 291 (321)
||++++++|.+++.+... ...+ ....+|. . ..+|+|+|+|+|.+++||+++|+++..+ +..|+. +
T Consensus 345 lP~~~~~~i~~~i~a~~~-----~~~g--~y~v~C~-~----~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~~i 412 (451)
T 3qvc_A 345 VPTEFFNQFVESASVFKV-----PFLS--LYVTTCG-N----TKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNI 412 (451)
T ss_dssp ECHHHHHHHHTTTTCEEC-----TTSS--CEEEETT-C----TTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEECE
T ss_pred CCHHHHHHHHHHcCCeec-----CCCC--eEEeeCC-c----CcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEEEE
Confidence 999999999988754321 1011 1345665 2 4689999999988999999999998753 468985 4
Q ss_pred ecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 292 GPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 292 ~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
.... ...+.||||+.|||++|+|||++|.
T Consensus 413 ~~~~-~~~~~~ILG~~FLr~~YvVfD~~n~ 441 (451)
T 3qvc_A 413 VPID-LEKNTFVLGDPFMRKYFTVYDYDNH 441 (451)
T ss_dssp EECC-CSTTEEEECHHHHHHEEEEEETTTT
T ss_pred EeCC-CCCCCEEECHHHhhcEEEEEECCCC
Confidence 4441 1156899999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=4.9e-48 Score=361.43 Aligned_cols=286 Identities=16% Similarity=0.197 Sum_probs=213.8
Q ss_pred CceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEEEE
Q 046254 5 NHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGIT 84 (321)
Q Consensus 5 ~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~~~ 84 (321)
+..|+++|.||||+|++.|+|||||+++||+|+.|..| ++.|||++|+||+... |.|.+.
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~----------------~~~~i~ 71 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG----------------FDVTVK 71 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE----------------EEEEEE
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC----------------ceEEEE
Confidence 45799999999999999999999999999999999776 5689999999999875 689999
Q ss_pred ECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCccccc-ccCcceEEeeCCCCCc--------hHHHhhhc
Q 046254 85 YGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQ-KKIIAGIMGLNWDSTS--------FMVQLGRL 155 (321)
Q Consensus 85 Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~-~~~~~GIlGLg~~~~s--------~~~ql~~~ 155 (321)
|++|+ ++|.+++|+|+|+ +.. .....+.|++..++.+ .+. ....+||||||++.++ ++.+|..+
T Consensus 72 Yg~Gs-~~G~~~~Dtv~i~-~~~---~~~~~~~~~~~~~~~~--~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q 144 (383)
T 2ewy_A 72 YTQGS-WTGFVGEDLVTIP-KGF---NTSFLVNIATIFESEN--FFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQ 144 (383)
T ss_dssp CSSCE-EEEEEEEEEEEET-TTE---EEEEEEEEEEEEEEES--CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHH
T ss_pred ECCcE-EEEEEEEEEEEEC-CCc---cceeEEEEEEEEeecc--eeeccCcCceEEecCchhcccccccccCHHHHHHHc
Confidence 99998 7999999999998 521 1112467888776655 331 2467999999987653 34455443
Q ss_pred --cCCceEEeecCC------CCCCcceEEeCCCCCCc-----ceEecCC-Cceeeee------------c----CCcceE
Q 046254 156 --VPDRFSCCLVQP------DKSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL------------N----GQRGCI 205 (321)
Q Consensus 156 --~~~~Fs~~l~~~------~~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~------------~----~~~~~i 205 (321)
++++||+||.+. .....|.|+||++|+.+ +++++.. ..|.+.. . ....+|
T Consensus 145 ~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~ai 224 (383)
T 2ewy_A 145 ANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAI 224 (383)
T ss_dssp HTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEE
T ss_pred cCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEE
Confidence 468999998531 12468999999999753 4556543 4554420 0 135799
Q ss_pred EeccCceEeechHHHHHHHHHHHHHhccCCccc-ccccCCCccceEecCCC-CCCCCeEEEEEeCc------EEEeCCCc
Q 046254 206 NDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEK-LFTCRKCGVTCFNLPAR-FNSFPSMTYHFQGA------DLVVEPEN 277 (321)
Q Consensus 206 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~C~~~~~~-~~~~P~i~~~f~g~------~~~i~~~~ 277 (321)
|||||++++||+++|++|.+++.+... .+... .. .......|+..... ...+|+|+|+|+|+ +++||+++
T Consensus 225 iDSGTt~~~lP~~~~~~l~~~i~~~~~-~~~~~~~~-~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~ 302 (383)
T 2ewy_A 225 VDSGTTLLRLPQKVFDAVVEAVARASL-IPEFSDGF-WTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQL 302 (383)
T ss_dssp ECTTCSSEEEEHHHHHHHHHHHHHTTC-SSCCCHHH-HHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHH
T ss_pred EEcCCccccCCHHHHHHHHHHHhhhcc-cccCcccc-ccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChHH
Confidence 999999999999999999999988642 11111 10 00135789976433 34689999999985 79999999
Q ss_pred eEEEcC---CCeEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 278 VFIFNH---QDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 278 y~~~~~---~~~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
|+.+.. .+..|+++... ...+.||||+.|||++|+|||++|.
T Consensus 303 yi~~~~~~~~~~~C~~~~i~--~~~~~~ILG~~fl~~~yvvfD~~~~ 347 (383)
T 2ewy_A 303 YIQPMMGAGLNYECYRFGIS--PSTNALVIGATVMEGFYVIFDRAQK 347 (383)
T ss_dssp HEEEECCCTTCSEEEEESEE--EESSCEEECHHHHTTEEEEEETTTT
T ss_pred heeecccCCCCceeEEEEec--CCCCcEEEChHHhCCeeEEEECCCC
Confidence 999864 25689875222 1245799999999999999999974
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.3e-47 Score=358.20 Aligned_cols=286 Identities=17% Similarity=0.196 Sum_probs=214.9
Q ss_pred CceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEEEE
Q 046254 5 NHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGIT 84 (321)
Q Consensus 5 ~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~~~ 84 (321)
+..|+++|.||||+|++.|+|||||+++||+|+.|..| ++.|||++|+||+... |.|.+.
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~----------------~~~~i~ 79 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR----------------KGVYVP 79 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE----------------EEEEEE
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC----------------ceEEEE
Confidence 55799999999999999999999999999999988665 5689999999999875 689999
Q ss_pred ECCCCceEEEEEEEEEEecCCCCCCCcccc-ceeEeeccccCCccccc-ccCcceEEeeCCCCC--------chHHHhhh
Q 046254 85 YGDVYETKEVDSLDTSTLLPPDEPSPVSVQ-NIRFGCSLESKDFVSIQ-KKIIAGIMGLNWDST--------SFMVQLGR 154 (321)
Q Consensus 85 Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~-~~~Fg~~~~~~~~~~~~-~~~~~GIlGLg~~~~--------s~~~ql~~ 154 (321)
|++|+ ++|.+++|+|+|+ +. ..+. .+.|++..+..+ .|. ....+||||||++.+ +++.+|..
T Consensus 80 Yg~Gs-~~G~~~~Dtv~ig-~g----~~~~~~~~~~~~~~~~~--~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~ 151 (395)
T 2qp8_A 80 YTQGK-WEGELGTDLVSIP-HG----PNVTVRANIAAITESDK--FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 151 (395)
T ss_dssp CSSCE-EEEEEEEEEEECT-TS----CSCEEEEEEEEEEEEES--CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred ECCcE-EEEEEEeEEEEEC-CC----CCceEEEEEEEEEccCc--ccccccCccceEEcCchhhccCCCCCCCHHHHHHH
Confidence 99998 6999999999997 42 2222 366787776554 332 246799999998764 34556655
Q ss_pred c--cCCceEEeecCCC---------CCCcceEEeCCCCCCc-----ceEecCC-Cceeeee-----c-----------CC
Q 046254 155 L--VPDRFSCCLVQPD---------KSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL-----N-----------GQ 201 (321)
Q Consensus 155 ~--~~~~Fs~~l~~~~---------~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~-----~-----------~~ 201 (321)
+ ++++||+||.+.. ....|.|+||++|+.+ +++++.. ..|.+.. . ..
T Consensus 152 q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~ 231 (395)
T 2qp8_A 152 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNY 231 (395)
T ss_dssp HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGS
T ss_pred ccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCC
Confidence 4 4579999997521 1357999999999763 4555543 4555431 0 13
Q ss_pred cceEEeccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCC-CCCCCeEEEEEeCc------EEEeC
Q 046254 202 RGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPAR-FNSFPSMTYHFQGA------DLVVE 274 (321)
Q Consensus 202 ~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~P~i~~~f~g~------~~~i~ 274 (321)
..+||||||++++||+++|++|.+++.+........... .......|+..... ...+|+|+|+|+|+ +++|+
T Consensus 232 ~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 310 (395)
T 2qp8_A 232 DKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGF-WLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 310 (395)
T ss_dssp SCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHH-HTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred ceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccc-cccccccccccccchHhhCCcEEEEEccCCCCceEEEEEC
Confidence 579999999999999999999999998875211111110 00135789976533 34689999999986 69999
Q ss_pred CCceEEEcCC----CeEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 275 PENVFIFNHQ----DSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 275 ~~~y~~~~~~----~~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
|++|+.+..+ ...|+++... +..+.||||+.|||++|+|||++|.
T Consensus 311 p~~yi~~~~~~~~~~~~C~~~~i~--~~~~~~ILG~~fl~~~yvvfD~~~~ 359 (395)
T 2qp8_A 311 PQQYLRPVEDVATSQDDCYKFAIS--QSSTGTVMGAVIMEGFYVVFDRARK 359 (395)
T ss_dssp HHHHEEEECCTTCCSCEEEEECEE--EESSCEEECHHHHTTEEEEEETTTT
T ss_pred HHHhEeecccCCCCCceEEEEEec--CCCCcEEEChHHhCCeeEEEECCCC
Confidence 9999998653 2589754222 1245799999999999999999974
No 30
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=6.1e-48 Score=360.39 Aligned_cols=288 Identities=17% Similarity=0.222 Sum_probs=212.5
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCC--C---CCCC--
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKS--P---FHCF-- 75 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~--~---~~c~-- 75 (321)
..+.+|+++|+|||| |+|||||+++||+|+.|. +|+.++|.++.|.. . ..|.
T Consensus 11 ~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~~~~~sc~~~ 69 (381)
T 1t6e_X 11 PATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANAYPAPGCPAP 69 (381)
T ss_dssp TTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHSSCCTTCCCC
T ss_pred CCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccCCCCCCCCCc
Confidence 457899999999998 999999999999987652 13344454444432 0 1232
Q ss_pred -------CCCc-eEEEEECCCCceEEEEEEEEEEecCCCCCCCccccce----eEeeccccCCcccccccCcceEEeeCC
Q 046254 76 -------EGDC-FYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNI----RFGCSLESKDFVSIQKKIIAGIMGLNW 143 (321)
Q Consensus 76 -------~~~~-~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~----~Fg~~~~~~~~~~~~~~~~~GIlGLg~ 143 (321)
+..| .|.+.|++|+.++|.+++|+|+++ +.++. +.++++ .|||++.+... .+ ....+||||||+
T Consensus 70 ~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig-~~~g~-~~v~~~~~~~~Fg~~~~~~~~-~~-~~~~dGIlGLg~ 145 (381)
T 1t6e_X 70 SCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVAN-TTDGS-KPVSKVNVGVLAACAPSKLLA-SL-PRGSTGVAGLAN 145 (381)
T ss_dssp CC------CBCEECCBCTTTCCBCCEEEEEEEEEEE-EESSS-SEEEEEEEEEEEEECCGGGGT-TS-CTTEEEEEECSS
T ss_pred cCCcCcCCCccccccccccCCceeeEEEEEEEEEee-ccCCC-ccccceeeeeEeecCcccccC-CC-CCCCceEEEeCC
Confidence 2357 599999999977999999999998 54332 345554 67999876220 12 257899999999
Q ss_pred CCCchHHHhhhc--cCCceEEeecCCCCCCcceEEeCCCCCC-----c--ceEecCC----Cceeeee------------
Q 046254 144 DSTSFMVQLGRL--VPDRFSCCLVQPDKSFHSRLEFGDQIIA-----G--KSLNLPP----NSFTIKL------------ 198 (321)
Q Consensus 144 ~~~s~~~ql~~~--~~~~Fs~~l~~~~~~~~g~l~~G~~d~~-----~--t~l~i~~----~~~~i~~------------ 198 (321)
+++|++.|+..+ .+++||+||.+. .+|.|+||+++.. + +++++.. ..|.++.
T Consensus 146 ~~~s~~~ql~~~~~~~~~FS~~L~~~---~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~ 222 (381)
T 1t6e_X 146 SGLALPAQVASAQKVANRFLLCLPTG---GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPV 222 (381)
T ss_dssp STTSHHHHHHHHHTCCSEEEEECCSS---SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCC
T ss_pred CcchhHHHHhhhcccCceEEEEeCCC---CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecC
Confidence 999999999764 578999999874 6899999998753 1 4555532 2444431
Q ss_pred cC----CcceEEeccCceEeechHHHHHHHHHHHHHhc-------cCCcc-cccccCCCccceEecCCCC-----CCCCe
Q 046254 199 NG----QRGCINDCGSVLTVIECEVYAVLTAEFIDYFS-------QHDIE-KLFTCRKCGVTCFNLPARF-----NSFPS 261 (321)
Q Consensus 199 ~~----~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~-------~~~~~-~~~~~~~~~~~C~~~~~~~-----~~~P~ 261 (321)
.. ..++||||||++++||+++|++|++++.+.+. .++.. ... ..+..|+..+... ..+|+
T Consensus 223 ~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~P~ 299 (381)
T 1t6e_X 223 PEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAV---APFGVCYDTKTLGNNLGGYAVPN 299 (381)
T ss_dssp CTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCC---TTCSCEEEGGGCCEETTEECCCC
T ss_pred CHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCC---CCCCccCCCCCCcccccCCcCCe
Confidence 11 34699999999999999999999999988763 22222 111 2568999876431 36899
Q ss_pred EEEEEeC-cEEEeCCCceEEEcCCCeEEEEEecCCC-----CCCCceeeechheeeeEEEEeCCCC
Q 046254 262 MTYHFQG-ADLVVEPENVFIFNHQDSFFFFFGPAFT-----PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 262 i~~~f~g-~~~~i~~~~y~~~~~~~~~C~~~~~~~~-----~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
|+|+|+| .+|+||+++|+++..++..|++++.... ...+.||||+.|||++|+|||++|.
T Consensus 300 i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~ 365 (381)
T 1t6e_X 300 VQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKK 365 (381)
T ss_dssp EEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTT
T ss_pred EEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCC
Confidence 9999986 4999999999998766789999877621 0126899999999999999999974
No 31
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=5.4e-47 Score=356.52 Aligned_cols=286 Identities=16% Similarity=0.196 Sum_probs=215.7
Q ss_pred CceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEEEE
Q 046254 5 NHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGIT 84 (321)
Q Consensus 5 ~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~~~ 84 (321)
+..|+++|.||||||++.|+|||||+++||+|++| |. .++.|+|++|+||+... |.|.+.
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~--~~~~y~~~~SsT~~~~~----------------~~~~i~ 86 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF--LHRYYQRQLSSTYRDLR----------------KGVYVP 86 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT--CSCCCCGGGCTTCEEEE----------------EEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc--ccCCcCcccCcccccCC----------------CEEEEE
Confidence 45899999999999999999999999999999988 43 36789999999999875 789999
Q ss_pred ECCCCceEEEEEEEEEEecCCCCCCCcccc-ceeEeeccccCCcccc-cccCcceEEeeCCCCC--------chHHHhhh
Q 046254 85 YGDVYETKEVDSLDTSTLLPPDEPSPVSVQ-NIRFGCSLESKDFVSI-QKKIIAGIMGLNWDST--------SFMVQLGR 154 (321)
Q Consensus 85 Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~-~~~Fg~~~~~~~~~~~-~~~~~~GIlGLg~~~~--------s~~~ql~~ 154 (321)
|++|+ ++|.+++|+|+|+ +. ..+. .+.|+++....+ .+ .....+||||||++.. +++.+|..
T Consensus 87 Yg~Gs-~~G~~~~D~v~ig-~~----~~~~~~~~~~~~~~~~~--~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 158 (402)
T 3vf3_A 87 YTQGK-WEGELGTDLVSIP-HG----PNVTVRANIAAITESDK--FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 158 (402)
T ss_dssp CSSCE-EEEEEEEEEEECT-TS----CSCEEEEEEEEEEEEES--CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred ECcEE-EEEEEEEEEEEEC-Cc----cccceeeeEEEEEcccc--ccccCCCccceEEcCchhhcccCCcCCcHHHHHHH
Confidence 99999 7999999999998 42 2222 345788776655 33 2356799999998754 45667766
Q ss_pred c--cCCceEEeecCCC---------CCCcceEEeCCCCCCc-----ceEecCC-Cceeeee----------c------CC
Q 046254 155 L--VPDRFSCCLVQPD---------KSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL----------N------GQ 201 (321)
Q Consensus 155 ~--~~~~Fs~~l~~~~---------~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~----------~------~~ 201 (321)
+ ++++||+||.+.. ....|.|+||++|+.. +++++.. ..|.+.. . ..
T Consensus 159 q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ 238 (402)
T 3vf3_A 159 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNY 238 (402)
T ss_dssp HSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGS
T ss_pred ccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCC
Confidence 4 4589999996421 2358999999999764 4556543 4565431 0 13
Q ss_pred cceEEeccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCC-CCCCCeEEEEEeCc------EEEeC
Q 046254 202 RGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPAR-FNSFPSMTYHFQGA------DLVVE 274 (321)
Q Consensus 202 ~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~P~i~~~f~g~------~~~i~ 274 (321)
..+||||||++++||+++|++|.+++.+.....+..... .......|+..... ...+|+|+|+|+|. +++|+
T Consensus 239 ~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 317 (402)
T 3vf3_A 239 DKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGF-WLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 317 (402)
T ss_dssp SCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTG-GGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccc-cccccccccccccchHhhCCceEEEEecCCCCceEEEEEC
Confidence 579999999999999999999999999875211111111 00136899987533 34689999999986 49999
Q ss_pred CCceEEEcCCC----eEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 275 PENVFIFNHQD----SFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 275 ~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
|++|+++..+. ..|+++... ...+.||||+.|||++|+|||++|.
T Consensus 318 ~~~yi~~~~~~~~~~~~C~~~~~~--~~~~~~ILG~~fl~~~yvvfD~~~~ 366 (402)
T 3vf3_A 318 PQQYLRPVEDVATSQDDCYKFAIS--QSSTGTVMGAVIMEGFYVVFDRARK 366 (402)
T ss_dssp HHHHEEECCCGGGTTEEEEEECEE--EESSCEEECHHHHTTEEEEEEGGGT
T ss_pred HHHheehhccCCCCCceEEEEecc--CCCCcEEEChHHhCCeEEEEECCCC
Confidence 99999987642 489975332 2246799999999999999999874
No 32
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.4e-46 Score=358.95 Aligned_cols=286 Identities=16% Similarity=0.193 Sum_probs=218.9
Q ss_pred CceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEEEE
Q 046254 5 NHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGIT 84 (321)
Q Consensus 5 ~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~~~ 84 (321)
+..|+++|.||||+|++.|+|||||+++||+|+.| |. .++.|+|++|+||+... |.|.+.
T Consensus 73 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~--~~~~y~~~~SsT~~~~~----------------~~~~i~ 132 (455)
T 3lpj_A 73 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF--LHRYYQRQLSSTYRDLR----------------KGVYVP 132 (455)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT--CSCCCCGGGCTTCEEEE----------------EEEEEE
T ss_pred CCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc--cCCcccCCCCCCcccCC----------------ccEEEE
Confidence 45899999999999999999999999999999988 53 46799999999999875 699999
Q ss_pred ECCCCceEEEEEEEEEEecCCCCCCCcccc-ceeEeeccccCCccccc-ccCcceEEeeCCCCC--------chHHHhhh
Q 046254 85 YGDVYETKEVDSLDTSTLLPPDEPSPVSVQ-NIRFGCSLESKDFVSIQ-KKIIAGIMGLNWDST--------SFMVQLGR 154 (321)
Q Consensus 85 Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~-~~~Fg~~~~~~~~~~~~-~~~~~GIlGLg~~~~--------s~~~ql~~ 154 (321)
|++|+ ++|.+++|+|+|+ +. ..+. .+.|+|+.+..+ .+. ....+||||||++.+ +++.+|..
T Consensus 133 Yg~Gs-~~G~~~~Dtv~ig-~~----~~~~~~~~~~~~~~~~~--~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 204 (455)
T 3lpj_A 133 YTQGK-WEGELGTDLVSIP-HG----PNVTVRANIAAITESDK--FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 204 (455)
T ss_dssp CSSCE-EEEEEEEEEEECT-TS----CSCEEEEEEEEEEEEES--CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred eCCeE-EEEEEEEEEEEEC-CC----cceeeEEEEEEEEccCc--ccccCCCcceEEEeCccccccccCCCCcHHHHHHH
Confidence 99999 6999999999998 42 1222 367888877665 332 356799999998754 45667765
Q ss_pred c--cCCceEEeecCCC---------CCCcceEEeCCCCCCc-----ceEecCC-Cceeeee----------c------CC
Q 046254 155 L--VPDRFSCCLVQPD---------KSFHSRLEFGDQIIAG-----KSLNLPP-NSFTIKL----------N------GQ 201 (321)
Q Consensus 155 ~--~~~~Fs~~l~~~~---------~~~~g~l~~G~~d~~~-----t~l~i~~-~~~~i~~----------~------~~ 201 (321)
+ ++++||+||.+.. ....|.|+||++|+.+ +++++.. ..|.+.. . ..
T Consensus 205 q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~ 284 (455)
T 3lpj_A 205 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNY 284 (455)
T ss_dssp HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGS
T ss_pred ccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCC
Confidence 4 4579999997531 1358999999999764 4556543 4555431 0 14
Q ss_pred cceEEeccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCC-CCCCCeEEEEEeCc------EEEeC
Q 046254 202 RGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPAR-FNSFPSMTYHFQGA------DLVVE 274 (321)
Q Consensus 202 ~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~P~i~~~f~g~------~~~i~ 274 (321)
..+||||||++++||+++|++|.+++.+.....+..... .......|+..... +..+|+|+|+|+|. +++|+
T Consensus 285 ~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~-~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 363 (455)
T 3lpj_A 285 DKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGF-WLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 363 (455)
T ss_dssp SCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHH-HTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred CeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCccc-ccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEEC
Confidence 569999999999999999999999999875211111111 00136899987543 34589999999987 49999
Q ss_pred CCceEEEcCCC----eEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254 275 PENVFIFNHQD----SFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 275 ~~~y~~~~~~~----~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
|++|+++..+. ..|+++... ...+.||||+.|||++|+|||++|.
T Consensus 364 ~~~yi~~~~~~~~~~~~C~~f~~~--~~~~~~ILG~~fl~~~yvvfD~~~~ 412 (455)
T 3lpj_A 364 PQQYLRPVEDVATSQDDCYKFAIS--QSSTGTVMGAVIMEGFYVVFDRARK 412 (455)
T ss_dssp HHHHEEEECCTTCCSCEEEEECEE--EESSCEEECHHHHTTEEEEEETTTT
T ss_pred HHHheEeccCCCCCCceEEEEecc--CCCCcEEEChHHhCCeEEEEECCCC
Confidence 99999987652 589985332 2346899999999999999999974
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=4.8e-46 Score=342.59 Aligned_cols=267 Identities=17% Similarity=0.194 Sum_probs=204.4
Q ss_pred cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEEE
Q 046254 4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGI 83 (321)
Q Consensus 4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~~ 83 (321)
.+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++.. |.|.+
T Consensus 10 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~~------------------~~~~i 61 (340)
T 1wkr_A 10 QLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSATS------------------DKVSV 61 (340)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEEE------------------EEEEE
T ss_pred cCcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCccccC------------------ceEEE
Confidence 3568999999999999999999999999999854 3799999886543 79999
Q ss_pred EECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc--------------hH
Q 046254 84 TYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS--------------FM 149 (321)
Q Consensus 84 ~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s--------------~~ 149 (321)
.|++|+ ++|.+++|+|+|+ + +.++++.|||++.+.+ + ...+||||||++..+ ++
T Consensus 62 ~Yg~Gs-~~G~~~~Dtv~~g-~-----~~v~~~~fg~~~~~~~---~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~ 129 (340)
T 1wkr_A 62 TYGSGS-FSGTEYTDTVTLG-S-----LTIPKQSIGVASRDSG---F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVT 129 (340)
T ss_dssp ECSSCE-EEEEEEEEEEEET-T-----EEEEEEEEEEEEEEES---C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHH
T ss_pred EECCcE-EEEEEEEEEEEEC-C-----EEEcceEEEEEEccCC---C--cCCCcEEECCccccccccccccccccCCCHH
Confidence 999998 8999999999999 7 8999999999998765 3 358999999987654 35
Q ss_pred HHhhhc---cCCceEEeecCCC--CCCcceEEeCCCCCCc-----ceEecCC-----Cceeee----ecC------Ccce
Q 046254 150 VQLGRL---VPDRFSCCLVQPD--KSFHSRLEFGDQIIAG-----KSLNLPP-----NSFTIK----LNG------QRGC 204 (321)
Q Consensus 150 ~ql~~~---~~~~Fs~~l~~~~--~~~~g~l~~G~~d~~~-----t~l~i~~-----~~~~i~----~~~------~~~~ 204 (321)
.+|..+ .+++||+||.+.. ....|.|+||++|+.+ +++++.. ..|.+. ..+ +..+
T Consensus 130 ~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~~~i~v~~~~~l~~~~~a 209 (340)
T 1wkr_A 130 DNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGINQSIRYGSSTSILSSTAG 209 (340)
T ss_dssp HHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEEeeEEECCCeEccCCCeE
Confidence 556543 3589999998642 1358999999999753 4666643 356553 111 2469
Q ss_pred EEeccCceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcC-
Q 046254 205 INDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNH- 283 (321)
Q Consensus 205 iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~- 283 (321)
||||||++++||+++|++|.+++.+... ...+ ....+|... ..+|+|+|+|+|.++.|+|++|+++..
T Consensus 210 iiDSGTt~~~lP~~~~~~l~~~~~a~~~-----~~~g--~~~~~C~~~----~~~p~i~f~f~g~~~~i~~~~yi~~~~~ 278 (340)
T 1wkr_A 210 IVDTGTTLTLIASDAFAKYKKATGAVAD-----NNTG--LLRLTTAQY----ANLQSLFFTIGGQTFELTANAQIWPRNL 278 (340)
T ss_dssp EECTTBCSEEECHHHHHHHHHHHTCEEC-----TTTS--SEEECHHHH----HTCCCEEEEETTEEEEECTGGGBCCGGG
T ss_pred EEeCCcccccCCHHHHHHHHHhhCCEEc-----CCCC--eEEeecccc----ccCCcEEEEECCEEEEEcHHHhcccccc
Confidence 9999999999999999999888754321 1001 133556543 357999999998899999999998753
Q ss_pred ------CCeEEE-EEecCCCC--CCCceeeechheeeeEEEEeCCCC
Q 046254 284 ------QDSFFF-FFGPAFTP--RKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 284 ------~~~~C~-~~~~~~~~--~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
+...|+ ++...... .+..||||+.|||++|+|||++|.
T Consensus 279 ~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ 325 (340)
T 1wkr_A 279 NTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNK 325 (340)
T ss_dssp GGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTT
T ss_pred ccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCC
Confidence 123454 55542111 235799999999999999999974
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.9e-39 Score=282.14 Aligned_cols=200 Identities=20% Similarity=0.294 Sum_probs=162.4
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC---CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCc
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK---SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDC 79 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~---~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~ 79 (321)
..+..|+++|.||||+|++.|+|||||+++||+|+.|. .|.. ++.|||++|+||+... |
T Consensus 10 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~--~~~y~~~~SsT~~~~~----------------~ 71 (239)
T 1b5f_A 10 DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA--HSMYESSDSSTYKENG----------------T 71 (239)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT--SCCBCGGGCTTCEEEE----------------E
T ss_pred cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC--CCCCCCccCCCeeeCC----------------c
Confidence 35789999999999999999999999999999999997 4764 5789999999999864 6
Q ss_pred eEEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCc--hHHHhhhc--
Q 046254 80 FYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS--FMVQLGRL-- 155 (321)
Q Consensus 80 ~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s--~~~ql~~~-- 155 (321)
.|.+.|++|+ ++|.+++|+|+++ + +.++++.|||+..+.+. .|.....+||||||++.++ ++.+|..+
T Consensus 72 ~~~i~Yg~Gs-~~G~~~~D~v~~g-~-----~~v~~~~fg~~~~~~~~-~f~~~~~~GilGLg~~~~s~p~~~~l~~qg~ 143 (239)
T 1b5f_A 72 FGAIIYGTGS-ITGFFSQDSVTIG-D-----LVVKEQDFIEATDEADN-VFLHRLFDGILGLSFQTISVPVWYNMLNQGL 143 (239)
T ss_dssp EEEEECSSCE-EEEEEEEEEEEET-T-----EEEEEEEEEEEEEECHH-HHTTCSCCEEEECSCCSSSCCHHHHHHHTTC
T ss_pred EEEEEECCCc-EEEEEEEEEEEEC-C-----cEEccEEEEEEEeccCc-cccccCcceEEecCccccccHHHHHHHHCCC
Confidence 8899999998 8999999999999 7 78999999999876541 2434578999999999876 33445443
Q ss_pred -cCCceEEeecCCC-CCCcceEEeCCCCCCc-----ceEecC-CCceeeee-------------cCCcceEEeccCceEe
Q 046254 156 -VPDRFSCCLVQPD-KSFHSRLEFGDQIIAG-----KSLNLP-PNSFTIKL-------------NGQRGCINDCGSVLTV 214 (321)
Q Consensus 156 -~~~~Fs~~l~~~~-~~~~g~l~~G~~d~~~-----t~l~i~-~~~~~i~~-------------~~~~~~iiDSGTt~~~ 214 (321)
.+++||+||.+.. ....|.|+||++|+.+ +++++. ...|.++. .....+||||||++++
T Consensus 144 i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~ 223 (239)
T 1b5f_A 144 VKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLS 223 (239)
T ss_dssp CSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEE
T ss_pred CCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhh
Confidence 3589999998752 2368999999999763 344443 34565431 1245799999999999
Q ss_pred echHHHHHHHHHHH
Q 046254 215 IECEVYAVLTAEFI 228 (321)
Q Consensus 215 lp~~~~~~l~~~~~ 228 (321)
||+++|++|.+++.
T Consensus 224 lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 224 GPTAIVTQINHAIG 237 (239)
T ss_dssp ECHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhC
Confidence 99999999998874
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.96 E-value=2.2e-29 Score=220.43 Aligned_cols=198 Identities=19% Similarity=0.211 Sum_probs=148.8
Q ss_pred ccccceeEeeccccCCcccccccCcceEEeeCCCCCc------hHHHhhhc---cCCceEEeecCCCC-CCcceEEeCCC
Q 046254 111 VSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTS------FMVQLGRL---VPDRFSCCLVQPDK-SFHSRLEFGDQ 180 (321)
Q Consensus 111 ~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~~---~~~~Fs~~l~~~~~-~~~g~l~~G~~ 180 (321)
+.++++.|||++.+.+. .+.....+||||||++..+ ++.+|..+ .+++||+||.+... ..+|.|+||++
T Consensus 3 ~~v~~~~Fg~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 3 VKVERQVFGEATKQPGI-TFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp EEEEEEEEEEEEECCSS-TTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred eEECCeEEEEEEEccCC-ccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 78899999999987652 2444678999999998654 55677654 36899999988642 13899999999
Q ss_pred CCCc-----ceEecC-CCceeeee------------cCCcceEEeccCceEeechHHHHHHHHHHHHHhccCCccccccc
Q 046254 181 IIAG-----KSLNLP-PNSFTIKL------------NGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTC 242 (321)
Q Consensus 181 d~~~-----t~l~i~-~~~~~i~~------------~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 242 (321)
|+.+ +++++. ...|.+.. .....+||||||++++||++++++|.+++.+... .. +
T Consensus 82 d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~--g- 154 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL----IQ--G- 154 (241)
T ss_dssp CGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----ET--T-
T ss_pred CHHHcCCceEEEECccccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec----cC--C-
Confidence 9763 466654 35666541 2345699999999999999999999998854321 11 1
Q ss_pred CCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeEEEE-EecCCC--CCCCceeeechheeeeEEEEe
Q 046254 243 RKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSFFFF-FGPAFT--PRKGKTILGARHQHNTQFVYD 317 (321)
Q Consensus 243 ~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~--~~~~~~ilG~~fl~~~~vvfD 317 (321)
....+|+.. ..+|+|+|+|+|.+++||+++|+++..+ +..|+. +..... +..+.||||+.|||++|+|||
T Consensus 155 -~~~~~C~~~----~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD 229 (241)
T 1lya_B 155 -EYMIPCEKV----STLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFD 229 (241)
T ss_dssp -EEEEEGGGG----GGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEE
T ss_pred -cEEEECCCC----ccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEEE
Confidence 134567654 3589999999888999999999998764 468995 655421 134689999999999999999
Q ss_pred CCCC
Q 046254 318 LDTF 321 (321)
Q Consensus 318 ~~~~ 321 (321)
++|.
T Consensus 230 ~~~~ 233 (241)
T 1lya_B 230 RDNN 233 (241)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 9974
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=3.6e-24 Score=160.05 Aligned_cols=82 Identities=27% Similarity=0.439 Sum_probs=75.6
Q ss_pred ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCC----CCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCC
Q 046254 3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCK----SCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGD 78 (321)
Q Consensus 3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~----~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~ 78 (321)
..+..|+++|.||||||++.|+|||||+++||+|+.|. .|.. ++.|||++|+||+...
T Consensus 10 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~--~~~y~p~~SsT~~~~~---------------- 71 (97)
T 1lya_A 10 YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI--HHKYNSDKSSTYVKNG---------------- 71 (97)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT--SCCBCGGGCTTCEEEE----------------
T ss_pred CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC--CCCCCchhCCCceeCC----------------
Confidence 36789999999999999999999999999999999997 5764 6799999999999875
Q ss_pred ceEEEEECCCCceEEEEEEEEEEec
Q 046254 79 CFYGITYGDVYETKEVDSLDTSTLL 103 (321)
Q Consensus 79 ~~~~~~Y~~g~~~~G~l~~D~v~~~ 103 (321)
|.|.+.|++|+ ++|.+++|+|+|+
T Consensus 72 ~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 72 TSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp EEEEEECSSCE-EEEEEEEEEEEES
T ss_pred CcEEEEECCcE-EEEEEEEEEEEEC
Confidence 79999999999 8999999999998
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.34 E-value=5.2e-13 Score=97.43 Aligned_cols=72 Identities=19% Similarity=0.285 Sum_probs=56.1
Q ss_pred ccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCC--CeEEEE-EecCCC-CCCCceeeechheeeeEEEEeCCCC
Q 046254 246 GVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQ--DSFFFF-FGPAFT-PRKGKTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 246 ~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~--~~~C~~-~~~~~~-~~~~~~ilG~~fl~~~~vvfD~~~~ 321 (321)
..+|... ..+|+|+|+|+|.+++|+|++|++.... +..|++ +..... +.++.||||++|||++|+|||++|.
T Consensus 4 ~v~C~~~----~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 4 QVDCNTL----SSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp EECGGGG----GGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTT
T ss_pred EEECCCC----CcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCC
Confidence 4456543 3589999999888999999999998654 368995 554311 1246899999999999999999974
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=84.63 E-value=0.91 Score=35.20 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=27.0
Q ss_pred cccCceEEEEEEecCCCcEEEEEEEcCCCceeEeC
Q 046254 2 FTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQC 36 (321)
Q Consensus 2 ~~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~ 36 (321)
+...+.+++++.|+- +++.+++|||++.+-+..
T Consensus 21 ~~~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 21 FTQVPMLYINIEINN--YPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp --CCCCCEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred hcccceEEEEEEECC--EEEEEEEECCCCccccCH
Confidence 345677999999985 799999999999998864
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=82.46 E-value=1.2 Score=34.70 Aligned_cols=34 Identities=12% Similarity=0.038 Sum_probs=27.6
Q ss_pred cccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCC
Q 046254 2 FTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 2 ~~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~ 37 (321)
|.....+++++.|.. +++.+++|||++.+.+..+
T Consensus 19 ~~~~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 19 SGQVTMLYINCKVNG--HPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp ---CCCCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred ccccCEEEEEEEECC--EEEEEEEeCCCCcEeeCHH
Confidence 556778999999975 8999999999999999754
No 40
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=81.69 E-value=1.4 Score=32.68 Aligned_cols=31 Identities=26% Similarity=0.206 Sum_probs=25.2
Q ss_pred EEEEEec---CCCcEEEEEEEcCCCceeEeCCCC
Q 046254 9 MLKLGIG---DPVKSLWFLLDTVAGLTWTQCQPC 39 (321)
Q Consensus 9 ~~~v~iG---tP~q~~~~~~DTGS~~~wv~~~~C 39 (321)
.+.|.|| +|+|.+..++|||..++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 3566666 789999999999999999985543
No 41
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=79.82 E-value=2.5 Score=30.49 Aligned_cols=27 Identities=30% Similarity=0.200 Sum_probs=23.3
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceeEeCC
Q 046254 9 MLKLGIGDPVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 9 ~~~v~iGtP~q~~~~~~DTGS~~~wv~~~ 37 (321)
++.+.||- |.+.+++|||+.++-+...
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecc
Confidence 57789985 9999999999999999743
No 42
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=79.55 E-value=2.1 Score=31.27 Aligned_cols=25 Identities=32% Similarity=0.191 Sum_probs=22.7
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceeEe
Q 046254 9 MLKLGIGDPVKSLWFLLDTVAGLTWTQ 35 (321)
Q Consensus 9 ~~~v~iGtP~q~~~~~~DTGS~~~wv~ 35 (321)
++.|.||- |.+.+++|||+.++-+.
T Consensus 10 ~v~v~I~G--q~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 10 TTIVLIND--TPLNVLLDTGADTSVLT 34 (104)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEE
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEc
Confidence 67899985 99999999999999997
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=72.21 E-value=5.4 Score=28.71 Aligned_cols=27 Identities=22% Similarity=0.090 Sum_probs=23.0
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceeEeCC
Q 046254 9 MLKLGIGDPVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 9 ~~~v~iGtP~q~~~~~~DTGS~~~wv~~~ 37 (321)
++.+.||- |.+.+++|||..++-+...
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCc
Confidence 56788985 9999999999999999633
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=68.51 E-value=5.1 Score=29.79 Aligned_cols=23 Identities=30% Similarity=0.293 Sum_probs=20.7
Q ss_pred EEecCCCcEEEEEEEcCCCceeEeC
Q 046254 12 LGIGDPVKSLWFLLDTVAGLTWTQC 36 (321)
Q Consensus 12 v~iGtP~q~~~~~~DTGS~~~wv~~ 36 (321)
+.||- |.+.+++|||..++-+..
T Consensus 18 ikI~G--q~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 18 IFVNG--YPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEETT--EEEEEEECTTCSSCEEEG
T ss_pred EEECC--EEEEEEecCCCCcEEEcc
Confidence 88884 999999999999999973
No 45
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=62.12 E-value=9 Score=28.30 Aligned_cols=28 Identities=29% Similarity=0.228 Sum_probs=23.5
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceeEeCCC
Q 046254 9 MLKLGIGDPVKSLWFLLDTVAGLTWTQCQP 38 (321)
Q Consensus 9 ~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~ 38 (321)
.+.+.||- |.+.+++|||..++-+....
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEECC--EEEEEEEccCCCceEEeccc
Confidence 46788885 99999999999999997543
No 46
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=50.50 E-value=21 Score=27.02 Aligned_cols=28 Identities=25% Similarity=0.277 Sum_probs=23.5
Q ss_pred EEEEEEecCCCcEEEEEEEcCCCceeEeCC
Q 046254 8 YMLKLGIGDPVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 8 y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~ 37 (321)
=++.+.|+- |...+++|||.+.+-+...
T Consensus 23 P~v~i~I~G--~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVGG--QPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CEEEEEECC--EEEEEEEeCCCCeEEEccc
Confidence 357788885 8999999999999999743
No 47
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=46.73 E-value=10 Score=29.04 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=18.4
Q ss_pred ceeeechheeeeEEEEeCCCC
Q 046254 301 KTILGARHQHNTQFVYDLDTF 321 (321)
Q Consensus 301 ~~ilG~~fl~~~~vvfD~~~~ 321 (321)
..|||..||+.+-+..|.++.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~ 129 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKEN 129 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTT
T ss_pred CeEecHHHHhhCCEEEECCCC
Confidence 489999999999999998763
No 48
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=44.73 E-value=9.3 Score=29.60 Aligned_cols=23 Identities=13% Similarity=0.144 Sum_probs=19.5
Q ss_pred CcceEEeccCceEeechHHHHHH
Q 046254 201 QRGCINDCGSVLTVIECEVYAVL 223 (321)
Q Consensus 201 ~~~~iiDSGTt~~~lp~~~~~~l 223 (321)
...++||||.+.+.++.+..+++
T Consensus 35 ~v~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 35 PLKAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEEEEECTTCSSCEEEHHHHHHT
T ss_pred EEEEEEeCCCCcEeeCHHHHHHc
Confidence 34689999999999999887765
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=43.70 E-value=20 Score=26.88 Aligned_cols=19 Identities=26% Similarity=0.153 Sum_probs=16.6
Q ss_pred cEEEEEEEcCCCceeEeCC
Q 046254 19 KSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 19 q~~~~~~DTGS~~~wv~~~ 37 (321)
|.+.+++|||..++-+...
T Consensus 30 q~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 30 VYITALLDSGADITIISEE 48 (124)
T ss_dssp EEEEEEECTTCSSCEEETT
T ss_pred EEEEEEecCCCCcEEEecc
Confidence 6779999999999999744
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=43.41 E-value=22 Score=29.09 Aligned_cols=26 Identities=31% Similarity=0.210 Sum_probs=22.9
Q ss_pred EEEEEEecCCCcEEEEEEEcCCCceeEe
Q 046254 8 YMLKLGIGDPVKSLWFLLDTVAGLTWTQ 35 (321)
Q Consensus 8 y~~~v~iGtP~q~~~~~~DTGS~~~wv~ 35 (321)
-.+.|.||- |.+.+++|||..++-+.
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~ 34 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIE 34 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEe
Confidence 357889985 99999999999999996
No 51
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=42.76 E-value=23 Score=30.99 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=25.0
Q ss_pred CceEEEE---EEecC---CCcEEEEEEEcCCCceeEeCC
Q 046254 5 NHTYMLK---LGIGD---PVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 5 ~~~y~~~---v~iGt---P~q~~~~~~DTGS~~~wv~~~ 37 (321)
.+.|.++ |.||. +.....+++|||+++++++..
T Consensus 192 ~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 192 QGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp TSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred CceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 4556666 46765 246789999999999999864
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=38.13 E-value=24 Score=30.76 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=24.1
Q ss_pred CceEEEE---EEecC-CCcEEEEEEEcCCCceeEeCC
Q 046254 5 NHTYMLK---LGIGD-PVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 5 ~~~y~~~---v~iGt-P~q~~~~~~DTGS~~~wv~~~ 37 (321)
.+.|.++ |.||. +.....+++|||+++++++..
T Consensus 188 ~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~ 224 (323)
T 1bxo_A 188 QGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDS 224 (323)
T ss_dssp TSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHH
T ss_pred CCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHH
Confidence 3456665 45664 345678999999999999864
No 53
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=36.76 E-value=27 Score=30.45 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=23.8
Q ss_pred CceEEEEE---EecC--CCcEEEEEEEcCCCceeEeCC
Q 046254 5 NHTYMLKL---GIGD--PVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 5 ~~~y~~~v---~iGt--P~q~~~~~~DTGS~~~wv~~~ 37 (321)
.+.|.+++ .||. +.....+++|||+++++++..
T Consensus 188 ~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 188 QGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDS 225 (323)
T ss_dssp TSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHH
T ss_pred CceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHH
Confidence 34566654 5665 235678999999999999864
No 54
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=35.67 E-value=28 Score=30.46 Aligned_cols=33 Identities=15% Similarity=0.125 Sum_probs=24.4
Q ss_pred CceEEEE---EEecCC---CcEEEEEEEcCCCceeEeCC
Q 046254 5 NHTYMLK---LGIGDP---VKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 5 ~~~y~~~---v~iGtP---~q~~~~~~DTGS~~~wv~~~ 37 (321)
.+.|.++ |.||.- .....+++|||+++++++..
T Consensus 191 ~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 191 QGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp TSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred CceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 3456665 567762 35688999999999999864
No 55
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=35.08 E-value=28 Score=30.35 Aligned_cols=33 Identities=18% Similarity=0.073 Sum_probs=24.0
Q ss_pred CceEEEE---EEecC--CCcEEEEEEEcCCCceeEeCC
Q 046254 5 NHTYMLK---LGIGD--PVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 5 ~~~y~~~---v~iGt--P~q~~~~~~DTGS~~~wv~~~ 37 (321)
.+.|.++ |.||. +.....+++|||+++++++..
T Consensus 192 ~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 192 RGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp TSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred CCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 3456655 56776 235678999999999999854
No 56
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=34.44 E-value=34 Score=29.79 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=24.4
Q ss_pred CceEEEE---EEecCC---CcEEEEEEEcCCCceeEeCC
Q 046254 5 NHTYMLK---LGIGDP---VKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 5 ~~~y~~~---v~iGtP---~q~~~~~~DTGS~~~wv~~~ 37 (321)
.+.|.++ |.||.- .....+++|||+++++++..
T Consensus 187 ~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 187 QGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp TSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred CceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 3456665 567652 35789999999999999864
No 57
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=32.54 E-value=39 Score=27.83 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=23.3
Q ss_pred ceEEEE---EEecCC----CcEEEEEEEcCCCceeEeCC
Q 046254 6 HTYMLK---LGIGDP----VKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 6 ~~y~~~---v~iGtP----~q~~~~~~DTGS~~~wv~~~ 37 (321)
+.|.++ |.||.- .....+++|||+++++++..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 445554 567652 35678999999999999854
No 58
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=27.95 E-value=27 Score=30.59 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=22.7
Q ss_pred ceEEEE---EEecCC---CcEEEEEEEcCCCceeEeCC
Q 046254 6 HTYMLK---LGIGDP---VKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 6 ~~y~~~---v~iGtP---~q~~~~~~DTGS~~~wv~~~ 37 (321)
+.|.++ |.||.- .....+++|||+++++++..
T Consensus 193 ~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~ 230 (330)
T 1yg9_A 193 DSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKA 230 (330)
T ss_dssp TSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHH
T ss_pred CEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHH
Confidence 345454 667652 24468999999999999864
No 59
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=26.14 E-value=55 Score=30.42 Aligned_cols=32 Identities=9% Similarity=0.013 Sum_probs=23.4
Q ss_pred ceEEEE---EEecC-----CCcEEEEEEEcCCCceeEeCC
Q 046254 6 HTYMLK---LGIGD-----PVKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 6 ~~y~~~---v~iGt-----P~q~~~~~~DTGS~~~wv~~~ 37 (321)
+.|.+. |.||. +.....+++|||++++++|..
T Consensus 231 ~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 231 GYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp TTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred CeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 456555 56664 345689999999999999853
No 60
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=23.02 E-value=78 Score=25.80 Aligned_cols=25 Identities=32% Similarity=0.259 Sum_probs=21.8
Q ss_pred EEEEEecCCCcEEEEEEEcCCCceeEe
Q 046254 9 MLKLGIGDPVKSLWFLLDTVAGLTWTQ 35 (321)
Q Consensus 9 ~~~v~iGtP~q~~~~~~DTGS~~~wv~ 35 (321)
.+.+.||- |...+++|||..++-+.
T Consensus 114 ~~~iki~G--q~~e~LlDTGAD~TVl~ 138 (203)
T 3ka2_A 114 LVTIRIGG--QLKEALLDTGADDTVIE 138 (203)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEC
T ss_pred cEEEEECC--EEEeeeecccCCceeee
Confidence 46788885 99999999999999995
No 61
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=20.43 E-value=71 Score=28.63 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=23.7
Q ss_pred ceEEEE---EEecCC----CcEEEEEEEcCCCceeEeCC
Q 046254 6 HTYMLK---LGIGDP----VKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 6 ~~y~~~---v~iGtP----~q~~~~~~DTGS~~~wv~~~ 37 (321)
+.|.+. |.||.- .....+++|||++++++|..
T Consensus 242 ~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~ 280 (383)
T 2x0b_A 242 GVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 280 (383)
T ss_dssp TSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHH
Confidence 456554 567653 35688999999999999854
No 62
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=20.33 E-value=56 Score=28.44 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=22.9
Q ss_pred ceEEEE---EEecCC----CcEEEEEEEcCCCceeEeCC
Q 046254 6 HTYMLK---LGIGDP----VKSLWFLLDTVAGLTWTQCQ 37 (321)
Q Consensus 6 ~~y~~~---v~iGtP----~q~~~~~~DTGS~~~wv~~~ 37 (321)
+.|.+. |.||.. +....+++|||+++++++..
T Consensus 199 ~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~ 237 (341)
T 3k1w_A 199 GVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 237 (341)
T ss_dssp TSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECHH
T ss_pred CEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCHH
Confidence 345554 456653 34578999999999999854
Done!