BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046257
         (838 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score = 1217 bits (3148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/821 (69%), Positives = 682/821 (83%), Gaps = 14/821 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD +PQ+     N LLFE+ R+  ++EALNLFLG+RR G P  GS+LS VLK CGCL
Sbjct: 46  QQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCL 105

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           FD + G+QVHC+C+K GF  DV+V TSLVD+YM+T +VEDG RVFD+M   NVVSWTSLL
Sbjct: 106 FDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLL 165

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +N +N++ L+LF +MQ+EGIKPN FTF+ VLG LA +G V   VQVHTMVIK+G +
Sbjct: 166 AGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLD 225

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N++++MY KS MV DA+AVFD ME+R++++WNSM+AG+VTN L +EAFE F  M
Sbjct: 226 STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L G +LT++ F +VIKLCA  KE+  A+QLH QV+KNG DFD NI+T LMVAYSKC ++
Sbjct: 286 RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA K+F MM  +++VVSWTA+ISG++QNG  D A+N FCQM REGVRPN FTYS ILTA
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA 405

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             AVSP Q+HA ++KTNYE S SVGTAL ++Y K G  +EAAK+FELIDEKDIVAWSAML
Sbjct: 406 NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAML 465

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +GYAQ+GD EGAVKI+ QL  EGV+PNEFTFSSV+NAC AP+A+VEQGKQFH+CSIK+  
Sbjct: 466 SGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGF 525

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +NALCVSSALVTMY+K+GNIESA+EVFKRQ  RDLVSWNSMI GYAQHG  KK+L++F+E
Sbjct: 526 SNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEE 585

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           MR ++LE DGITFIGVI+ACTHAGLV+EGQ+YFD+MV ++HI PTMEHYSCMVDLYSRAG
Sbjct: 586 MRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAG 645

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
           MLEKAMD+IN+MPF A AT+WRT+LAACR              LISLQP DSA YVLLSN
Sbjct: 646 MLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSN 705

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA  G+WQERA+VRKLM+ +KVKKEAGYSWIEVKNKT+SF+AGD+SHPQS++IY KLEE
Sbjct: 706 IYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEE 765

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           LS RLKDAGY PDT YVL D+++EHKE ILSQHSERLAIAFGL+ATP G P+QIVKNLRV
Sbjct: 766 LSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRV 825

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCHTVIKLISK+E RDIVVRD+NRFHHFK G CSCGDYW
Sbjct: 826 CGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score = 1106 bits (2860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/821 (64%), Positives = 643/821 (78%), Gaps = 14/821 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD++P R+  ++N+LLF Y R    QEAL+LF+ + R GL     T+S VL  C   
Sbjct: 56  QQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGS 115

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           F+   G QVHC+CVK G    ++V  SLVD+Y +T NV DGRRVFD+M + +VVSW SLL
Sbjct: 116 FNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLL 175

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY+ N+ ND+V ELF  MQVEG +P+ +T STV+  LA++G VA  +Q+H +V+K G E
Sbjct: 176 TGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFE 235

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               VCN+LISM  KS M+RDAR VFD ME++DS++WNSM+AG+V N   +EAFETFNNM
Sbjct: 236 TERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNM 295

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            LAGA+ T +TF SVIK CA+ KEL L R LH + LK+G+  + N+ T LMVA +KC ++
Sbjct: 296 QLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEI 355

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA  +FS+M  ++ VVSWTAMISG+LQNG  D AVN F  M REGV+PN FTYS ILT 
Sbjct: 356 DDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV 415

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           Q AV   ++HA +IKTNYEKS SVGTALL+A+VK G + +A KVFELI+ KD++AWSAML
Sbjct: 416 QHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAML 475

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           AGYAQ G+TE A KI+ QLT EG+KPNEFTF S+INACTAP+A+VEQGKQFHA +IK +L
Sbjct: 476 AGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRL 535

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           NNALCVSS+LVT+Y+K+GNIESA E+FKRQ++RDLVSWNSMI GYAQHG  KKALEVF+E
Sbjct: 536 NNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEE 595

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M++++LE D ITFIGVI+AC HAGLV +GQ YF+IM+N+HHI PTMEHYSCM+DLYSRAG
Sbjct: 596 MQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAG 655

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
           ML KAMDIIN MPF  +ATVWR VLAA R              +ISL+P  SA YVLLSN
Sbjct: 656 MLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSN 715

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YAA G+W E+  VRKLM+ R+VKKE GYSWIEVKNKTYSFLAGD+SHP S+ IYSKL E
Sbjct: 716 IYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSE 775

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L+TRL+D GY+PDT+YV  DI+DE KE ILS HSERLAIAFGL+AT    PLQIVKNLRV
Sbjct: 776 LNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRV 835

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCH+ IKL+S +E+R IVVRD+NRFHHFK GLCSCGDYW
Sbjct: 836 CGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 165/525 (31%), Positives = 276/525 (52%), Gaps = 13/525 (2%)

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
           +R ++    +++FD     ++     LL  Y+R       L LF  +   G+ P+S+T S
Sbjct: 47  LRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMS 106

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
            VL V A         QVH   +K G     SV N+L+ MY K+  VRD R VFD M DR
Sbjct: 107 CVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDR 166

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D ++WNS++ GY  N  + + +E F  M + G      T  +VI   A    + +  Q+H
Sbjct: 167 DVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIH 226

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           + V+K G + +  +   L+   SK G + DA  +F  M E KD VSW +MI+GH+ NG  
Sbjct: 227 ALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNM-ENKDSVSWNSMIAGHVINGQD 285

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTAL 419
             A   F  M   G +P   T++ ++ +  ++        +H   +K+    + +V TAL
Sbjct: 286 LEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTAL 345

Query: 420 LNAYVKKGILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           + A  K   +D+A  +F L+   + +V+W+AM++GY Q GDT+ AV ++  +  EGVKPN
Sbjct: 346 MVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPN 405

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
            FT+S+++    A   +     + HA  IK     +  V +AL+  + K GNI  A +VF
Sbjct: 406 HFTYSTILTVQHAVFIS-----EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVF 460

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH-AGLV 597
           +    +D+++W++M+ GYAQ G T++A ++F ++ R+ ++ +  TF  +I ACT     V
Sbjct: 461 ELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASV 520

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           ++G+Q+    + +  +   +   S +V LY++ G +E A +I  R
Sbjct: 521 EQGKQFHAYAI-KLRLNNALCVSSSLVTLYAKRGNIESAHEIFKR 564


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score = 1098 bits (2841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/822 (63%), Positives = 640/822 (77%), Gaps = 15/822 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            +LFD+SP R+   Y  LLF + RD   QEA  LFL I RLG+ +  S  SSVLK    L
Sbjct: 47  HNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATL 106

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D +FGRQ+HC+C+K GF  DV+V TSLVD YM+ +N +DGR+VFD+M E NVV+WT+L+
Sbjct: 107 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI 166

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYARN MND VL LF RMQ EG +PNSFTF+  LGVLA+EG+    +QVHT+V+KNG +
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N+LI++YLK   VR AR +FD  E +  +TWNSM++GY  N L +EA   F +M
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L    L+ S+F SVIKLCA  KELR   QLH  V+K G  FD NIRT LMVAYSKC  M
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA ++F  +  + +VVSWTAMISG LQN   + AV+ F +M R+GVRPN FTYS+ILTA
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
            P +SP +VHA ++KTNYE+S +VGTALL+AYVK G ++EAAKVF  ID+KDIVAWSAML
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           AGYAQ G+TE A+K++ +LT  G+KPNEFTFSS++N C A +A++ QGKQFH  +IK++L
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +++LCVSSAL+TMY+KKGNIESA EVFKRQR++DLVSWNSMI GYAQHG   KAL+VFKE
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M+++ ++ DG+TFIGV  ACTHAGLV+EG++YFDIMV +  I PT EH SCMVDLYSRAG
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
            LEKAM +I  MP  A +T+WRT+LAACR              +I+++P DSA YVLLSN
Sbjct: 647 QLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSN 706

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           MYA +G WQERA+VRKLMN+R VKKE GYSWIEVKNKTYSFLAGD SHP  +QIY KLE+
Sbjct: 707 MYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLED 766

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           LSTRLKD GY+PDTSYVLQDIDDEHKEA+L+QHSERLAIAFGL+ATP G+PL I+KNLRV
Sbjct: 767 LSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRV 826

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
           CGDCH VIKLI+K+E R+IVVRD+NRFHHF  +G+CSCGD+W
Sbjct: 827 CGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 294/524 (56%), Gaps = 25/524 (4%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FD   +RN V +  L+  Y R+S++ E L LF+ ++  G      T ++ L   
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL--- 201

Query: 89  GCLFDH-VFGR--QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           G L +  V GR  QVH   VK+G  + + VS SL++LY++  NV   R +FD     +VV
Sbjct: 202 GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 261

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +W S++SGYA N ++   L +F+ M++  ++ +  +F++V+ + A+   +    Q+H  V
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEA 264
           +K G     ++  AL+  Y K   + DA  +F  +    + ++W +M++G++ N+   EA
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381

Query: 265 FETFNNM---GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            + F+ M   G+   E T S  ++ + + + +       ++H+QV+K   +    + T L
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPS-------EVHAQVVKTNYERSSTVGTAL 434

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           + AY K GK+E+A+K+FS + + KD+V+W+AM++G+ Q G  + A+  F ++T+ G++PN
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDD-KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493

Query: 382 GFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
            FT+S IL    A +       Q H   IK+  + S  V +ALL  Y KKG ++ A +VF
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           +   EKD+V+W++M++GYAQ G    A+ +++++    VK +  TF  V  ACT  +  V
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT-HAGLV 612

Query: 497 EQGKQFHACSIK-AKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           E+G+++    ++  K+      +S +V +YS+ G +E A +V +
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/589 (28%), Positives = 293/589 (49%), Gaps = 39/589 (6%)

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
           +   +FD     +  S+ SLL G++R+        LF  +   G++ +   FS+VL V A
Sbjct: 45  NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
                    Q+H   IK G     SV  +L+  Y+K    +D R VFD M++R+ +TW +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           +++GY  N ++ E    F  M   G +    TF + + + A         Q+H+ V+KNG
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNF 369
           +D    +   L+  Y KCG +  A  +F    E+K VV+W +MISG+  NG +DL A+  
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKT-EVKSVVTWNSMISGYAANG-LDLEALGM 282

Query: 370 FCQMTREGVR--PNGFTYSIILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F  M    VR   + F   I L A      F  Q+H  ++K  +    ++ TAL+ AY K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342

Query: 426 KGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
              + +A ++F+ I    ++V+W+AM++G+ Q    E AV ++ ++  +GV+PNEFT+S 
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++ A    S +     + HA  +K     +  V +AL+  Y K G +E A++VF     +
Sbjct: 403 ILTALPVISPS-----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 457

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC--THAGLVDEGQQ 602
           D+V+W++M+ GYAQ G T+ A+++F E+ +  ++ +  TF  ++  C  T+A +  +G+Q
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM-GQGKQ 516

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLI 662
           +    + +  +  ++   S ++ +Y++ G +E A ++  R         W ++++     
Sbjct: 517 FHGFAI-KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISG---- 570

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                           YA  G   +   V K M  RKVK + G ++I V
Sbjct: 571 ----------------YAQHGQAMKALDVFKEMKKRKVKMD-GVTFIGV 602



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 233/441 (52%), Gaps = 29/441 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + LFD++  ++ V +N ++  Y  + L  EAL +F  +R   + L  S+ +SV+K C
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSW 147
             L +  F  Q+HC  VK GF  D N+ T+L+  Y +   + D  R+F ++    NVVSW
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 365

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T+++SG+ +N   +  ++LF  M+ +G++PN FT+S +L  L     V +  +VH  V+K
Sbjct: 366 TAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVK 421

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E  ++V  AL+  Y+K   V +A  VF G++D+D + W++M+AGY        A + 
Sbjct: 422 TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKM 481

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           F  +   G +    TF S++ +CA T   +   +Q H   +K+ +D    + + L+  Y+
Sbjct: 482 FGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 541

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G +E A ++F   RE KD+VSW +MISG+ Q+G    A++ F +M +  V+ +G T+ 
Sbjct: 542 KKGNIESAEEVFKRQRE-KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600

Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSV-------------GTALLNAYVKKGILDEAA 433
            +  A         HA +++   EK F +              + +++ Y + G L++A 
Sbjct: 601 GVFAA-------CTHAGLVEEG-EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652

Query: 434 KVFE-LIDEKDIVAWSAMLAG 453
           KV E + +      W  +LA 
Sbjct: 653 KVIENMPNPAGSTIWRTILAA 673



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 231/459 (50%), Gaps = 17/459 (3%)

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           +  NG   V   C   +S    S  + +A  +FD    RD  ++ S++ G+  +    EA
Sbjct: 22  IYANGVAQVRIYCFGTVS----SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEA 77

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F N+   G E+  S F SV+K+ AT  +    RQLH Q +K G   D ++ T L+  
Sbjct: 78  KRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDT 137

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y K    +D  K+F  M+E ++VV+WT +ISG+ +N   D  +  F +M  EG +PN FT
Sbjct: 138 YMKGSNFKDGRKVFDEMKE-RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT 196

Query: 385 YSIIL--TAQPAVS--PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           ++  L   A+  V     QVH  ++K   +K+  V  +L+N Y+K G + +A  +F+  +
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            K +V W++M++GYA  G    A+ ++  +    V+ +E +F+SVI  C A    +   +
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC-ANLKELRFTE 315

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
           Q H   +K        + +AL+  YSK   +  A  +FK      ++VSW +MI G+ Q+
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
              ++A+++F EM+R+ +  +  T+  ++TA     ++   + +  ++   +    T+  
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG- 431

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            + ++D Y + G +E+A  + + +        W  +LA 
Sbjct: 432 -TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score = 1090 bits (2820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/822 (63%), Positives = 635/822 (77%), Gaps = 15/822 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            +LFD+SP R+   Y  LLF + RD   QEA  LFL I+ LG+ +  S  SSVLK    L
Sbjct: 51  HNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATL 110

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D +FGRQ+HC+C+K GF  DV+V TSLVD YM+ +N +DGR VFD+M E NVV+WT+L+
Sbjct: 111 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLI 170

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYARN +N+ VL LF RMQ EG +PNSFTF+  LGVLA+EG+    +QVHT+V+KNG +
Sbjct: 171 SGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 230

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N+LI++YLK   VR AR +FD  E +  +TWNSM++GY  N L +EA   F +M
Sbjct: 231 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 290

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L    L+ S+F S+IKLCA  KELR   QLH  V+K G  FD NIRT LMVAYSKC  M
Sbjct: 291 RLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAM 350

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA ++F     + +VVSWTAMISG LQN   + AV  F +M R+GVRPN FTYS+ILTA
Sbjct: 351 LDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA 410

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
            P +SP +VHA ++KTNYE+S +VGTALL+AYVK G +DEAAKVF  ID KDIVAWSAML
Sbjct: 411 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAML 470

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           AGYAQ G+TE A+KI+ +LT  GVKPNEFTFSS++N C A +A++ QGKQFH  +IK++L
Sbjct: 471 AGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRL 530

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +++LCVSSAL+TMY+KKG+IESA EVFKRQR++DLVSWNSMI GYAQHG   KAL+VFKE
Sbjct: 531 DSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 590

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M+++ ++ D +TFIGV  ACTHAGLV+EG++YFDIMV +  I PT EH SCMVDLYSRAG
Sbjct: 591 MKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 650

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
            LEKAM +I+ MP  A +T+WRT+LAACR              +I++ P DSA YVLLSN
Sbjct: 651 QLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSN 710

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           MYA +G WQERA+VRKLMN+R VKKE GYSWIEVKNKTY+FLAGD SHP  +QIY KLE+
Sbjct: 711 MYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLED 770

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           LSTRLKD GY+PDTSYVLQDIDDEHKEA+L+QHSERLAIAFGL+ATP G+PL I+KNLRV
Sbjct: 771 LSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRV 830

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
           CGDCH VIKLI+K+E R+IVVRD+NRFHHF  +G+CSCGD+W
Sbjct: 831 CGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/523 (31%), Positives = 294/523 (56%), Gaps = 27/523 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  +++FD   +RN V +  L+  Y R+SL++E L LF+ ++  G      T ++ L   
Sbjct: 149 KDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAAL--- 205

Query: 89  GCLFDH-VFGR--QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           G L +  V GR  QVH   VK+G  + + VS SL++LY++  NV   R +FD     +VV
Sbjct: 206 GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 265

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +W S++SGYA N ++   L +F+ M++  ++ +  +F++++ + A+   +    Q+H  V
Sbjct: 266 TWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSV 325

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFD--GMEDRDSITWNSMVAGYVTNELHME 263
           +K G     ++  AL+  Y K   + DA  +F   G    + ++W +M++G++ N+   E
Sbjct: 326 VKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLG-NVVSWTAMISGFLQNDGKEE 384

Query: 264 AFETFNNM---GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           A   F+ M   G+   E T S  ++ + + + +       ++H+QV+K   +    + T 
Sbjct: 385 AVGLFSEMKRKGVRPNEFTYSVILTALPVISPS-------EVHAQVVKTNYERSSTVGTA 437

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+ AY K GK+++A+K+FS + + KD+V+W+AM++G+ Q G  + A+  F ++T+ GV+P
Sbjct: 438 LLDAYVKLGKVDEAAKVFSGI-DNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKP 496

Query: 381 NGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           N FT+S IL    A +       Q H   IK+  + S  V +ALL  Y KKG ++ A +V
Sbjct: 497 NEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEV 556

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+   EKD+V+W++M++GYAQ G    A+ +++++    VK +  TF  V  ACT  +  
Sbjct: 557 FKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACT-HAGL 615

Query: 496 VEQGKQFHACSIK-AKLNNALCVSSALVTMYSKKGNIESASEV 537
           VE+G+++    ++  K+      +S +V +YS+ G +E A +V
Sbjct: 616 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV 658



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 226/424 (53%), Gaps = 28/424 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + LFD++  ++ V +N ++  Y  + L  EAL +F  +R   + L  S+ +S++K C
Sbjct: 250 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLC 309

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSW 147
             L +  F  Q+HC  VK GF  D N+ T+L+  Y +   + D  R+F +     NVVSW
Sbjct: 310 ANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSW 369

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T+++SG+ +N   +  + LF  M+ +G++PN FT+S +L  L     V +  +VH  V+K
Sbjct: 370 TAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVK 425

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E  ++V  AL+  Y+K   V +A  VF G++++D + W++M+AGY        A + 
Sbjct: 426 TNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKI 485

Query: 268 FNNMGLAGAELTRSTFVSVIKLC-ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           F+ +   G +    TF S++ +C ATT  +   +Q H   +K+ +D    + + L+  Y+
Sbjct: 486 FSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 545

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G +E A ++F   RE KD+VSW +MISG+ Q+G    A++ F +M +  V+ +  T+ 
Sbjct: 546 KKGHIESAEEVFKRQRE-KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFI 604

Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSV-------------GTALLNAYVKKGILDEAA 433
            +  A         HA +++   EK F +              + +++ Y + G L++A 
Sbjct: 605 GVFAA-------CTHAGLVEEG-EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 656

Query: 434 KVFE 437
           KV +
Sbjct: 657 KVID 660



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 260/564 (46%), Gaps = 74/564 (13%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  +FD   DRD  ++ S++ G+  +    EA   F N+   G E+  S F SV+K+ AT
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             +    RQLH Q +K G   D ++ T L+  Y K    +D   +F  M+E ++VV+WT 
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKE-RNVVTWTT 168

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL--TAQPAVS--PFQVHAHIIKTN 408
           +ISG+ +N   +  +  F +M  EG +PN FT++  L   A+  V     QVH  ++K  
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 228

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
            +K+  V  +L+N Y+K G + +A  +F+  + K +V W++M++GYA  G    A+ ++ 
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 288

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            +    V+ +E +F+S+I  C A    +   +Q H   +K        + +AL+  YSK 
Sbjct: 289 SMRLNHVRLSESSFASIIKLC-ANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKC 347

Query: 529 GNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
             +  A  +FK      ++VSW +MI G+ Q+   ++A+ +F EM+R+ +  +  T+  +
Sbjct: 348 MAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVI 407

Query: 588 ITAC-------THA------------------------GLVDEGQQYFDIMVNEHHIYPT 616
           +TA         HA                        G VDE  + F  + N+  +   
Sbjct: 408 LTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV--- 464

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMP---FAASATVWRTVLAACRLISL------QPH 667
              +S M+  Y++AG  E A+ I + +       +   + ++L  C   +       Q H
Sbjct: 465 --AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFH 522

Query: 668 --------DSAIYV--LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS 717
                   DS++ V   L  MYA  GH +    V K   ++ +      SW        S
Sbjct: 523 GFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDL-----VSW-------NS 570

Query: 718 FLAGDISHPQSNQIYSKLEELSTR 741
            ++G   H Q+ +     +E+  R
Sbjct: 571 MISGYAQHGQAMKALDVFKEMKKR 594


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score = 1088 bits (2815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/823 (64%), Positives = 626/823 (76%), Gaps = 16/823 (1%)

Query: 32  QSLFDRSPQR--NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
            +LFD+ P R     E+N+LLF Y RD   +EALNLF+ +    L    STLS V   C 
Sbjct: 45  HNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICA 104

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
              D   GRQVHC+CVK G    V+V TSLVD+YM+T NV DGRRVFD+M E NVVSWTS
Sbjct: 105 GSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTS 164

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           LL+GY+ N +   V ELF +MQ EG+ PN +T STV+  L +EG+V   +QVH MV+K+G
Sbjct: 165 LLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG 224

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    V N+LIS+Y +  M+RDAR VFD ME RD +TWNSM+AGYV N   +E FE FN
Sbjct: 225 FEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFN 284

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M LAG + T  TF SVIK CA+ +EL L + +  + LK+G   D  + T LMVA SKC 
Sbjct: 285 KMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCK 344

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +M+DA  +FS+M E K+VVSWTAMISG LQNG  D AVN F QM REGV+PN FTYS IL
Sbjct: 345 EMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL 404

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           T    V   ++HA +IKTNYE+S SVGTALL+AYVK G   +A KVFE+I+ KD++AWSA
Sbjct: 405 TVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSA 464

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           MLAGYAQ G+TE A K++ QL  EG+KPNEFTFSSVINAC +P+AA EQGKQFHA +IK 
Sbjct: 465 MLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKM 524

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
           +LNNALCVSSALVTMY+K+GNI+SA EVFKRQ++RDLVSWNSMI GY+QHG  KKALEVF
Sbjct: 525 RLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVF 584

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            EM++++++ D +TFIGVITACTHAGLV++GQ+YF+ M+N+HHI PTM+HYSCM+DLYSR
Sbjct: 585 DEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSR 644

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AGMLEKAM IIN MPF   ATVWRT+L A R              LISLQP DSA YVLL
Sbjct: 645 AGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLL 704

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SNMYAA G+WQER  VRKLM+ RKVKKE GYSWIEVKNKTYSFLAGD++HP SNQIYSKL
Sbjct: 705 SNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKL 764

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
            ELS RLKDAGY+PDT  V  DI+DE KE ILS HSERLAIAFGL+ATP   P+QIVKNL
Sbjct: 765 SELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNL 824

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           RVCGDCH   KL+S +E+R IVVRD+NRFHHFK+GLCSCGDYW
Sbjct: 825 RVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/851 (59%), Positives = 642/851 (75%), Gaps = 21/851 (2%)

Query: 7   LKSLINPQTKQPPKSLRSPFYS-----KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQE 61
           +K  ++P      +SL  PF S     +    LFD +P ++   YNRLLF++ R++  +E
Sbjct: 30  IKHFLHPHGFLYHQSL--PFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDRE 87

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           AL+LF  +   GL + G TLS  LK CG LFD V GRQVHC+ +KSGF  DV+V TSLVD
Sbjct: 88  ALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVD 147

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +YM+T + EDGR +FD+M   NVVSWTSLLSGYARN +ND V+ L ++MQ+EG+ PN FT
Sbjct: 148 MYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFT 207

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F+TVLG LADE I+   VQVH M++KNG E  T VCNALI MYLKS+MV DA AVFD M 
Sbjct: 208 FATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMV 267

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            RDS+TWN M+ GY     ++E F+ F+ M LAG +L+R+ F + +KLC+  +EL   +Q
Sbjct: 268 VRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQ 327

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LH  V+KNG +F  +IRT LMV YSKC  +++A K+FSM     +VV+WTAMI G +QN 
Sbjct: 328 LHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNN 387

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLN 421
             + AV+ FCQM+REGVRPN FTYS +L  +P+    Q+HA IIK  YEK  SV TALL+
Sbjct: 388 NNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLD 447

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
           AYVK G + E+A+VF  I  KDIVAWSAML G AQ  D+E A++++ QL  EGVKPNE+T
Sbjct: 448 AYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYT 507

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           FSSVINAC++ +A VE GKQ HA ++K+  +NALCVSSAL+TMYSKKGNIESA +VF RQ
Sbjct: 508 FSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
            +RD+VSWNSMI GY QHG  KKALEVF+ M+ Q L  D +TFIGV+TACTHAGLV+EG+
Sbjct: 568 EERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGE 627

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
           +YF+IM+ ++HI   +EHYSCMVDLYSRAGM +KAMDIIN MPF AS T+WRT+LAACR 
Sbjct: 628 KYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRV 687

Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                        L+SLQP+D+  YVLLSN++A  G+W+E+A VRKLM++RKVKKEAG S
Sbjct: 688 HRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCS 747

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           WIE+KN+ +SFLAGD+SHP S+ +Y+KLEELS +LKD GY+PDT+YV  D+++EHKEAIL
Sbjct: 748 WIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAIL 807

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
           SQHSERLAIA+GL+A P GAP+QI KNLR+CGDCH VI+LIS +E R ++VRD+NRFHHF
Sbjct: 808 SQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHF 867

Query: 828 KEGLCSCGDYW 838
           K G+CSCG YW
Sbjct: 868 KGGVCSCGGYW 878


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score = 1066 bits (2757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/851 (59%), Positives = 640/851 (75%), Gaps = 21/851 (2%)

Query: 7   LKSLINPQTKQPPKSLRSPFYS-----KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQE 61
           +K  ++P      +SL  PF S     +    LFD +P ++   YNRLLF++ R++  +E
Sbjct: 30  IKHFLHPHGFLYHQSL--PFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDRE 87

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           AL+LF  +   GL + G TLS  LK CG LFD V GRQVHC+ +KSGF  DV+V TSLVD
Sbjct: 88  ALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVD 147

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +YM+T + EDGR +FD+M   NVVSWTSLLSGYARN +ND V+ L ++MQ+EG+ PN FT
Sbjct: 148 MYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFT 207

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F+TVLG LADE I+   VQVH M++KNG E  T VCNALI MYLKS+MV DA AVFD M 
Sbjct: 208 FATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMV 267

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            RDS+TWN M+ GY     ++E F+ F+ M LAG +L+R+ F + +KLC+  +EL   +Q
Sbjct: 268 VRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQ 327

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LH  V+KNG +F  +IRT LMV YSKC  +++A K+FSM     +VV+WTAMI G +QN 
Sbjct: 328 LHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNN 387

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLN 421
               AV+ FCQM+REGVRPN FTYS +L  +P+    Q+HA IIK  YEK  SV TALL+
Sbjct: 388 NNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYEKVPSVATALLD 447

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
           AYVK G + E+A+VF  I  KDIVAWSAML G AQ  D+E A++++ QL  EGVKPNE+T
Sbjct: 448 AYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYT 507

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           FSSVINAC++ +A VE GKQ HA ++K+  +NALCVSSAL+TMYSKKGNIESA +VF RQ
Sbjct: 508 FSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ 567

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
            +RD+VSWNSMI GY QHG  KKALEVF+ M+ Q L  D +TFIGV+TACTHAGLV+EG+
Sbjct: 568 EERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGE 627

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
           +YF+IM+ ++HI    EHYSCMVDLYSRAGM +KAMDIIN MPF AS T+WRT+LAACR 
Sbjct: 628 KYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRV 687

Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                        L+SLQP+D+  YVLLSN++A  G+W+E+A VRKLM++RKVKKEAG S
Sbjct: 688 HRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCS 747

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           WIE+KN+ +SFLAGD+SHP S+ +Y+KLEELS +LKD GY+PDT+YV  D+++EHKEAIL
Sbjct: 748 WIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAIL 807

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
           SQHSERLAIA+GL+A P GAP+QI KNLR+CGDCH VI+LIS +E R ++VRD+NRFHHF
Sbjct: 808 SQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHF 867

Query: 828 KEGLCSCGDYW 838
           K G+CSCG YW
Sbjct: 868 KGGVCSCGGYW 878


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  924 bits (2387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/820 (54%), Positives = 588/820 (71%), Gaps = 16/820 (1%)

Query: 35  FDRSPQRNF-VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            D  P+R+  V  NR+LF+Y R  +  E L+ F   RR G+ +  +TLS VLK C  + D
Sbjct: 55  LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114

Query: 94  HVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            V G Q+HC CVK G  R +V+  TSLVD+YM+  +V +G  VF+ M + NVV+WTSLL+
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G A  +M+  V+ LF RM+ EGI PN FTF++VL  +A +G +    +VH   +K G   
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              VCN+L++MY K  +V DA++VF+ ME RD ++WN+++AG   NE  +EA + F+   
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               ++T+ST+ +VIKLCA  K+L LARQLHS VLK+G     N+ T L  AYSKCG++ 
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA  IFSM    ++VVSWTA+ISG +QNG I LAV  F +M  + V PN FTYS +L A 
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS 414

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            ++ P Q+HA +IKTNY+   SVGTALL +Y K G  ++A  +F++I++KD+VAWSAML+
Sbjct: 415 LSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS 474

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            +AQ GD EGA  ++ ++  +G+KPNEFT SSVI+AC  PSA V+QG+QFHA SIK + +
Sbjct: 475 CHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYH 534

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           +A+CVSSALV+MYS+KGNI+SA  VF+RQ  RDLVSWNSMI GYAQHG++ KA+E F++M
Sbjct: 535 DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQM 594

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
               ++ DG+TF+ VI  CTH GLV EGQQYFD MV +H I PTMEHY+CMVDLYSRAG 
Sbjct: 595 EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGK 654

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNM 678
           L++ M +I  MPF A A VWRT+L ACR              L+SL+PHDS+ YVLLSN+
Sbjct: 655 LDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNI 714

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           YAA G W+ER  VRKLM+ RKVKKEAG SWI++KNK +SF+A D SHP S+QIY KL+ +
Sbjct: 715 YAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVI 774

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
            TRLK  GY P+TS+VL DI ++ KEA+L  HSERLA+AFGL+ATP G PLQIVKNLRVC
Sbjct: 775 ITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVC 834

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCH V+K++S +E R+I++RD +RFHHF  G CSCGD+W
Sbjct: 835 GDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 158/512 (30%), Positives = 267/512 (52%), Gaps = 11/512 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P++N V +  LL       +H E + LF  +R  G+     T +SVL        
Sbjct: 157 VFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGA 216

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G++VH + VK G    V V  SL+++Y +   VED + VF+ M   ++VSW +L++G
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              N+     L+LFH  +    K    T++TV+ + A+   +A A Q+H+ V+K+G  + 
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336

Query: 214 TSVCNALISMYLKSKMVRDARAVFD-GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            +V  AL   Y K   + DA  +F      R+ ++W ++++G + N     A   F+ M 
Sbjct: 337 GNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                    T+ +++K   +     L  Q+H+QV+K       ++ T L+ +YSK G  E
Sbjct: 397 EDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTE 452

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA  IF M+ E KDVV+W+AM+S H Q G  + A   F +M  +G++PN FT S ++ A 
Sbjct: 453 DALSIFKMI-EQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDAC 511

Query: 393 PAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              S       Q HA  IK  Y  +  V +AL++ Y +KG +D A  VFE   ++D+V+W
Sbjct: 512 ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW 571

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++M++GYAQ G +  A++ +RQ+ + G++ +  TF +VI  CT     VE  + F +   
Sbjct: 572 NSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVR 631

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
             K+N  +   + +V +YS+ G ++    + +
Sbjct: 632 DHKINPTMEHYACMVDLYSRAGKLDETMSLIR 663



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 177/360 (49%), Gaps = 7/360 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F+    R+ V +N L+     +    EAL LF   R     +  ST ++V+K C  L
Sbjct: 256 KSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANL 315

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVVSWTSL 150
                 RQ+H   +K GF    NV T+L D Y +   + D   +F     S NVVSWT++
Sbjct: 316 KQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAI 375

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SG  +N      + LF RM+ + + PN FT+S +L       +     Q+H  VIK   
Sbjct: 376 ISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML----KASLSILPPQIHAQVIKTNY 431

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           + + SV  AL++ Y K     DA ++F  +E +D + W++M++ +        A   FN 
Sbjct: 432 QHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNK 491

Query: 271 MGLAGAELTRSTFVSVIKLCA-TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           M + G +    T  SVI  CA  +  +   RQ H+  +K        + + L+  YS+ G
Sbjct: 492 MAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKG 551

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++ A  +F    + +D+VSW +MISG+ Q+G    A+  F QM   G++ +G T+  ++
Sbjct: 552 NIDSAQIVFERQTD-RDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVI 610


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/820 (54%), Positives = 587/820 (71%), Gaps = 16/820 (1%)

Query: 35  FDRSPQRNF-VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            D  P+R+  V  NR+LF+Y R  +  E L+ F   RR G+ +  +TLS VLK C  + D
Sbjct: 55  LDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114

Query: 94  HVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            V G Q+HC CVK G  R +V+  TSLVD+YM+  +V +G  VF+ M + NVV+WTSLL+
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G A  +M+  V+ LF RM+ EGI PN FTF++VL  +A +G +    +VH   +K G   
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              VCN+L++MY K  +V DA++VF+ ME RD ++WN+++AG   NE  +EA + F+   
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               ++T+ST+ +VIKLCA  K+L LARQLHS VLK+G     N+ T L  AYSKCG++ 
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA  IFSM    ++VVSWTA+ISG +QNG I LAV  F +M  + V PN FTYS +L A 
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKAS 414

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            ++ P Q+HA +IKTNY+    VGTALL +Y K G  ++A  +F++I++KD+VAWSAML+
Sbjct: 415 LSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLS 474

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            +AQ GD EGA  ++ ++  +G+KPNEFT SSVI+AC  PSA V+QG+QFHA SIK + +
Sbjct: 475 CHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYH 534

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           +A+CVSSALV+MYS+KGNI+SA  VF+RQ  RDLVSWNSMI GYAQHG++ KA+E F++M
Sbjct: 535 DAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQM 594

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
               ++ DG+TF+ VI  CTH GLV EGQQYFD MV +H I PTMEHY+CMVDLYSRAG 
Sbjct: 595 EASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGK 654

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNM 678
           L++ M +I  MPF A A VWRT+L ACR              L+SL+PHDS+ YVLLSN+
Sbjct: 655 LDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNI 714

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           YAA G W+ER  VRKLM+ RKVKKEAG SWI++KNK +SF+A D SHP S+QIY KL+ +
Sbjct: 715 YAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVI 774

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
            TRLK  GY P+TS+VL DI ++ KEA+L  HSERLA+AFGL+ATP G PLQIVKNLRVC
Sbjct: 775 ITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVC 834

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCH V+K++S +E R+I++RD +RFHHF  G CSCGD+W
Sbjct: 835 GDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/512 (30%), Positives = 266/512 (51%), Gaps = 11/512 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P++N V +  LL       +H E + LF  +R  G+     T +SVL        
Sbjct: 157 VFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGA 216

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G++VH + VK G    V V  SL+++Y +   VED + VF+ M   ++VSW +L++G
Sbjct: 217 LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG 276

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              N+     L+LFH  +    K    T++TV+ + A+   +A A Q+H+ V+K+G  + 
Sbjct: 277 LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLT 336

Query: 214 TSVCNALISMYLKSKMVRDARAVFD-GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            +V  AL   Y K   + DA  +F      R+ ++W ++++G + N     A   F+ M 
Sbjct: 337 GNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMR 396

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                    T+ +++K   +     L  Q+H+QV+K        + T L+ +YSK G  E
Sbjct: 397 EDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTE 452

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA  IF M+ E KDVV+W+AM+S H Q G  + A   F +M  +G++PN FT S ++ A 
Sbjct: 453 DALSIFKMI-EQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDAC 511

Query: 393 PAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              S       Q HA  IK  Y  +  V +AL++ Y +KG +D A  VFE   ++D+V+W
Sbjct: 512 ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSW 571

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++M++GYAQ G +  A++ +RQ+ + G++ +  TF +VI  CT     VE  + F +   
Sbjct: 572 NSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVR 631

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
             K+N  +   + +V +YS+ G ++    + +
Sbjct: 632 DHKINPTMEHYACMVDLYSRAGKLDETMSLIR 663



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 176/360 (48%), Gaps = 7/360 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F+    R+ V +N L+     +    EAL LF   R     +  ST ++V+K C  L
Sbjct: 256 KSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANL 315

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVVSWTSL 150
                 RQ+H   +K GF    NV T+L D Y +   + D   +F     S NVVSWT++
Sbjct: 316 KQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAI 375

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SG  +N      + LF RM+ + + PN FT+S +L       +     Q+H  VIK   
Sbjct: 376 ISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML----KASLSILPPQIHAQVIKTNY 431

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           + +  V  AL++ Y K     DA ++F  +E +D + W++M++ +        A   FN 
Sbjct: 432 QHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNK 491

Query: 271 MGLAGAELTRSTFVSVIKLCAT-TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           M + G +    T  SVI  CA  +  +   RQ H+  +K        + + L+  YS+ G
Sbjct: 492 MAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKG 551

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++ A  +F    + +D+VSW +MISG+ Q+G    A+  F QM   G++ +G T+  ++
Sbjct: 552 NIDSAQIVFERQTD-RDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVI 610


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  913 bits (2359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/820 (53%), Positives = 592/820 (72%), Gaps = 18/820 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGCLFD 93
           FD  P RN +++   LF++ R     +AL+ FL + R  G  + G  L  VLK CG + D
Sbjct: 61  FDEIPHRNTLDHA--LFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPD 118

Query: 94  HVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            V G+Q+H  C++ G  R DV V TSLVD+YM+ ++V DGR+VF+ M + NVV+WTSLL+
Sbjct: 119 RVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLT 178

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY ++     V+ELF RM+ EG+ PNS TF++VL V+A +G+V    +VH   +K G   
Sbjct: 179 GYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCS 238

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              VCN+L++MY K  +V +AR VF GME RD ++WN+++AG V N   +EA + F++  
Sbjct: 239 TVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSR 298

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +   LT+ST+ +VIKLCA  K+L LARQLHS VLK G     N+ T LM AYSK G++ 
Sbjct: 299 SSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLG 358

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  IF +M   ++VVSWTAMI+G +QNG + LA   F +M  +GV PN FTYS ILTA 
Sbjct: 359 NALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTAS 418

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            A  P Q+HA +IKTNYE +  VGTALL +Y K    +EA  +F++ID+KD+V+WSAML 
Sbjct: 419 VASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLT 478

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            YAQ GD++GA  I+ ++T  G+KPNEFT SSVI+AC +P+A V+ G+QFHA SIK + +
Sbjct: 479 CYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCH 538

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           +ALCVSSALV+MY++KG+IESA  +F+RQ  RDLVSWNSM+ GYAQHG+++KAL+VF++M
Sbjct: 539 DALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQM 598

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
             + +E DG+TF+ VI  C HAGLV+EGQ+YFD M  ++ I PTMEHY+CMVDLYSRAG 
Sbjct: 599 EAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGK 658

Query: 633 LEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNM 678
           L++AM +I  M F A   VWRT+L AC              +L+SL+P DSA YVLLSN+
Sbjct: 659 LDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNI 718

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           Y+A G W+E+  VRKLM+ +KVKKEAG SWI++KNK +SF+A D SHP S QIY+KL  +
Sbjct: 719 YSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAM 778

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
           +T+LK  GY PDTS+ L ++ +E KEA+L+ HSERLA+AFGL+ATP GAPL I KNLRVC
Sbjct: 779 TTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVC 838

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCHTVIK++SK+E R+IV+RD +RFHHF  G+CSCGD+W
Sbjct: 839 GDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 116/224 (51%), Gaps = 3/224 (1%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F    Q++ V ++ +L  Y +      A N+F+ +   GL     T+SSV+  C    
Sbjct: 460 SIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPT 519

Query: 93  DHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             V  GRQ H   +K      + VS++LV +Y R  ++E  + +F+   + ++VSW S+L
Sbjct: 520 AGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSML 579

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA++  + + L++F +M+ EGI+ +  TF +V+   A  G+V    +    + ++ G 
Sbjct: 580 SGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGI 639

Query: 212 VVTSVCNA-LISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
             T    A ++ +Y ++  + +A ++ +GM      + W +++ 
Sbjct: 640 TPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLG 683


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/824 (53%), Positives = 586/824 (71%), Gaps = 22/824 (2%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           +D +    S     V+Y R      R     EAL+ F+ + R G  + G+ +S VLK CG
Sbjct: 58  RDAAAGSSSNPVAIVDYGR------RGKGRGEALDHFVDVHRCG-RVQGAAVSRVLKVCG 110

Query: 90  CLFDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            + D V G Q+HC CVK GF R +V V T+LVD+YM+   VEDGR VF+ M + NVV+WT
Sbjct: 111 LIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWT 170

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           SLL+GY + +    V+ LF RM+ EG+ PN FTF++VL  +A +G V    +VH   +K 
Sbjct: 171 SLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKF 230

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G      VCN+LI+MY K  +V +A+AVF  ME RD ++WN+++AG + NE  +EA + F
Sbjct: 231 GCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLF 290

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           ++   + A+L++ST+ +VIKLCA  K+L LARQLHS VLK+G   D N+ T +M AYSKC
Sbjct: 291 HDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKC 350

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G+++DA  IF +M   ++VVSWTAMI G +QN  I LA   F +M  + V+PN FTYS +
Sbjct: 351 GELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTV 410

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
           LTA   +   Q+HA IIKTNY+ + SVGTALL +Y K G  +EA  +F++ID KD+VAWS
Sbjct: 411 LTASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWS 470

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AML+ Y+Q GD +GA  ++ +++ +G+KPNEFT SS I+AC +P+A ++QG+QFHA SIK
Sbjct: 471 AMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIK 530

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            +  +A+CV SALVTMY++KG+I+SA  VF+RQ  RDLVSWNSMI GYAQHG++K+AL+ 
Sbjct: 531 YRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDT 590

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F++M    +E DG TF+ VI  CTHAGLV EGQQYFD MV +H+I PTMEHYSCMVDLYS
Sbjct: 591 FRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYS 650

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           RAG L++ M++I  MPF A A VWRT+L ACR+              + L+P DSA YVL
Sbjct: 651 RAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVL 710

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YAA G W+ER  VRKLM+ +KVKKEAG SWI++KNK +SF+A D SHP S QIY+K
Sbjct: 711 LSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAK 770

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L+ ++TRLK  GY P+TS VL DI +E KE +L  HSERLA+AFGL+ATP   PLQIVKN
Sbjct: 771 LKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKN 830

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCH V+K++S +E R+I++RD +RFHHF  G CSCGD+W
Sbjct: 831 LRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/795 (52%), Positives = 563/795 (70%), Gaps = 16/795 (2%)

Query: 60  QEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVST 117
            +AL+ FL   RR G  + G  L  ++K CG + D V G+Q+H  CV+ G    D+ V T
Sbjct: 36  HQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGT 95

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           SLVD+YM  ++V DGR+VF+ M + NVV+WTSLL+GY +  +   V+ LF RM+ EG+ P
Sbjct: 96  SLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWP 155

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           N FTFS+VL ++A +G+V     VH   IK G      VCN+L++MY K  +V +AR VF
Sbjct: 156 NPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 215

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
             ME RD ++WN+++AG V N   +EA + F++   +   LT ST+ +VI LCA  K L 
Sbjct: 216 CRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLG 275

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           LARQLHS VLK+G     N+ T LM AY+K G+++ A  +F +M   ++VVSWTAMI G 
Sbjct: 276 LARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGC 335

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT 417
           +QNG I LA   F +M  +GV PN  TYS ILT   A  P Q+HA +IKTNYE + +VGT
Sbjct: 336 IQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGT 395

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           AL+ +Y K    +EA  +F++ID+KD+V+WSAML  YAQ GD  GA   + ++T  G+KP
Sbjct: 396 ALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKP 455

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           NEFT SS I+AC +P+A V+ G+QFHA SIK + ++ALCVSSALV+MY++KG+IE+A  V
Sbjct: 456 NEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCV 515

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           F+RQ  RDL+SWNSM+ GYAQHG+++KAL+VF++M  + ++ DG+TF+ VI  C HAGLV
Sbjct: 516 FERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLV 575

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           +EGQQYFD+MV ++ I PTM+HY+CMVDLYSRAG L++ M +I  MPF A  T+WR +L 
Sbjct: 576 EEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLG 635

Query: 658 ACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
           ACR              L+SL+P DSA YVLLSN+Y+A G W+E+  VRKLM+ +KV+KE
Sbjct: 636 ACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKE 695

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHK 763
           AG SWI++KNK + F+A D SHP S QIY+KL  ++ +LK  GY PDTS+V  D+ ++ K
Sbjct: 696 AGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQK 755

Query: 764 EAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNR 823
           EA+L+ HSERLA+AFGL+ATP  APL I KNLRV GD HTV+K++S++E R+IV+RD  R
Sbjct: 756 EAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCR 815

Query: 824 FHHFKEGLCSCGDYW 838
           FHHFK G+CSCGD+W
Sbjct: 816 FHHFKSGVCSCGDFW 830



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 162/511 (31%), Positives = 268/511 (52%), Gaps = 19/511 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+   +RN V +  LL  Y +  +  + ++LF  +R  G+     T SSVL      
Sbjct: 111 RKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQ 170

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH + +K G    V V  SL+++Y +   VE+ R VF  M   ++VSW +L+
Sbjct: 171 GMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLM 230

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G   N  +   L+LFH  +         T+STV+ + A+   +  A Q+H+ V+K+G  
Sbjct: 231 AGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFH 290

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTN---ELHMEAFET 267
              +V  AL+  Y K+  +  A  VF  M   ++ ++W +M+ G + N    L    F  
Sbjct: 291 SYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSR 350

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
               G+A  +LT ST ++V        E     Q+H+QV+K   +    + T LMV+YSK
Sbjct: 351 MREDGVAPNDLTYSTILTV-------SEASFPPQIHAQVIKTNYECTPTVGTALMVSYSK 403

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS- 386
               E+A  IF M+ + KDVVSW+AM++ + Q G  + A N F +MT  G++PN FT S 
Sbjct: 404 LCSTEEALSIFKMI-DQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISS 462

Query: 387 -IILTAQPAVS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            I   A PA       Q HA  IK     +  V +AL++ Y +KG ++ A  VFE   ++
Sbjct: 463 AIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDR 522

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+++W++ML+GYAQ G ++ A+ ++RQ+  EG+  +  TF SVI  C A +  VE+G+Q+
Sbjct: 523 DLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGC-AHAGLVEEGQQY 581

Query: 503 HACSIK-AKLNNALCVSSALVTMYSKKGNIE 532
               ++   +   +   + +V +YS+ G ++
Sbjct: 582 FDLMVRDYGITPTMDHYACMVDLYSRAGKLD 612



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 201/411 (48%), Gaps = 12/411 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F R   R+ V +N L+     +    EAL LF   R     L  ST S+V+  C  L  
Sbjct: 214 VFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKH 273

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVVSWTSLLS 152
               RQ+H   +K GF    NV T+L+D Y +   ++    VF  M+ S NVVSWT+++ 
Sbjct: 274 LGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMID 333

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N        LF RM+ +G+ PN  T+ST+L V       +   Q+H  VIK   E 
Sbjct: 334 GCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTV----SEASFPPQIHAQVIKTNYEC 389

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             +V  AL+  Y K     +A ++F  ++ +D ++W++M+  Y        A   F  M 
Sbjct: 390 TPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMT 449

Query: 273 LAGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
           + G +    T  S I  CA+    + L RQ H+  +K+       + + L+  Y++ G +
Sbjct: 450 MHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSI 509

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY-SIILT 390
           E+A  +F    + +D++SW +M+SG+ Q+G    A++ F QM  EG+  +G T+ S+I+ 
Sbjct: 510 ENAQCVFERQTD-RDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMG 568

Query: 391 AQPA--VSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFE 437
              A  V   Q +  ++  +Y  + ++     +++ Y + G LDE   + E
Sbjct: 569 CAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIE 619


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/729 (54%), Positives = 518/729 (71%), Gaps = 27/729 (3%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVL 189
           +++FD+  +  +     LL  ++RN  N   L LF  ++  G   +  + S VL   G L
Sbjct: 46  QQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCL 105

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
            D  IV    QVH   IK G     SV  +L+ MY+K++ V D   VFD M  ++ ++W 
Sbjct: 106 FDR-IVGK--QVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWT 162

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           S++AGY  N L+ +A + F+ M L G +    TF +V+   A    +    Q+H+ V+K+
Sbjct: 163 SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS 222

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           G+D    +   ++  YSK   + DA  +F  M E ++ VSW +MI+G + NG    A   
Sbjct: 223 GLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM-ENRNAVSWNSMIAGFVTNGLDLEAFEL 281

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F +M  EGV+     ++ ++     +       Q+H  +IK   +   ++ TAL+ AY K
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 426 KGILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLT-SEGVKPNEFTFS 483
              +D+A K+F ++   +++V+W+A+++GY Q G T+ A+ ++ Q+   EGV+PNEFTFS
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFS 401

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
           SV+NAC AP+A+VEQGKQFH+CSIK+  +NALCVSSALVTMY+K+GNIESA+EVFKRQ  
Sbjct: 402 SVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 461

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           RDLVSWNSMI GYAQHG  KK+L++F+EMR ++LE DGITFIGVI+ACTHAGLV+EGQ+Y
Sbjct: 462 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY 521

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--- 660
           FD+MV ++HI PTMEHYSCMVDLYSRAGMLEKAMD+IN+MPF A AT+WRT+LAACR   
Sbjct: 522 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHL 581

Query: 661 -----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
                      LISLQP DSA YVLLSN+YA  G+WQERA+VRKLM+ +KVKKEAGYSWI
Sbjct: 582 NVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 641

Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
           EVKNKT+SF+AGD+SHPQS++IY KLEELS RLKDAGY PDT YVL D+++EHKE ILSQ
Sbjct: 642 EVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQ 701

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSERLAIAFGL+ATP G P+QIVKNLRVCGDCHTVIKLISK+E RDIVVRD+NRFHHFK 
Sbjct: 702 HSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKG 761

Query: 830 GLCSCGDYW 838
           G CSCGDYW
Sbjct: 762 GSCSCGDYW 770



 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 258/516 (50%), Positives = 367/516 (71%), Gaps = 8/516 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD +PQ+     N LLFE+ R+  ++EALNLFLG+RR G P  GS+LS VLK CGCL
Sbjct: 46  QQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCL 105

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           FD + G+QVHC+C+K GF  DV+V TSLVD+YM+T +VEDG RVFD+M   NVVSWTSLL
Sbjct: 106 FDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLL 165

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +N +N++ L+LF +MQ+EGIKPN FTF+ VLG LA +G V   VQVHTMVIK+G +
Sbjct: 166 AGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLD 225

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N++++MY KS MV DA+AVFD ME+R++++WNSM+AG+VTN L +EAFE F  M
Sbjct: 226 STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRM 285

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L G +LT++ F +VIKLCA  KE+  A+QLH QV+KNG DFD NI+T LMVAYSKC ++
Sbjct: 286 RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEI 345

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILT 390
           +DA K+F MM  +++VVSWTA+ISG++QNG  D A+N FCQM R EGV PN FT+S +L 
Sbjct: 346 DDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLN 405

Query: 391 AQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           A  A +       Q H+  IK+ +  +  V +AL+  Y K+G ++ A +VF+   ++D+V
Sbjct: 406 ACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLV 465

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W++M++GYAQ G  + ++KI+ ++ S+ ++ +  TF  VI+ACT  +  V +G+++   
Sbjct: 466 SWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTH-AGLVNEGQRYFDL 524

Query: 506 SIKA-KLNNALCVSSALVTMYSKKGNIESASEVFKR 540
            +K   +   +   S +V +YS+ G +E A ++  +
Sbjct: 525 MVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINK 560


>gi|255565583|ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536869|gb|EEF38507.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 661

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/611 (63%), Positives = 466/611 (76%), Gaps = 18/611 (2%)

Query: 7   LKSLINPQTKQPPKSLRSPFYSKKD-----------------QSLFDRSPQRNFVEYNRL 49
            K+   PQ  Q  K+ R+ F                      Q++FDRSP+++ V+ N L
Sbjct: 8   FKTFTKPQPIQFLKTTRTQFLQSHATAVNLGKPLQEPKCSIAQNVFDRSPKQDVVQCNHL 67

Query: 50  LFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF 109
           LF+Y R++ H E +NLF+ I R  L   GSTLS VLK C CL    FG QVH  CVKSGF
Sbjct: 68  LFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACACLSCKKFGIQVHDYCVKSGF 127

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
             D++V TSLVD+YM++  VE+G+RVFD+M E NVVSWTSLL GYA N +N   LE F  
Sbjct: 128 LEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLVGYAHNGLNMEALECFFE 187

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVA-TAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           MQ   IKPN FTF+TVLG LAD   +A   VQ+HTMVIKNG E    VCN+LI+MY KS 
Sbjct: 188 MQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFEATIFVCNSLINMYSKSG 247

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
           MV++A+AVFD M  RD+I+WNSMVAGYV N L++EA E F ++ LAG +LT   F SVIK
Sbjct: 248 MVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIK 307

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            CA  KEL  ARQLH QVLK G ++DHNIRT LMVAY+K  +++DA KIFSMM  +++VV
Sbjct: 308 SCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGIRNVV 367

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTN 408
           SWTA+ISGHLQNG  + AVN FC+M+REGVRPN +T+S IL AQP VSPF+VHA +IK++
Sbjct: 368 SWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAAQPVVSPFEVHAQVIKSD 427

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           YEKS SVGTALL+AYVK G L+EA+KVFE ID+KDIVAWSAM+AGYAQ GDTEGAVKI  
Sbjct: 428 YEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILI 487

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+  +GV+PNE+TFSSVINACTAP+AAVEQGKQFHA SIK++ N+ALCVSSALVTMY+K+
Sbjct: 488 QMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVSSALVTMYAKR 547

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G IESA+EVF+RQ  RDLVSWNSM+ GYAQHGH +KALEVFKEM+ Q+LE DG+TFIGVI
Sbjct: 548 GEIESANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLELDGVTFIGVI 607

Query: 589 TACTHAGLVDE 599
           +ACTHAGLVDE
Sbjct: 608 SACTHAGLVDE 618



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 211/417 (50%), Gaps = 13/417 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A+ VFD    +D +  N ++  Y  N  H E    F  +  +      ST   V+K CA 
Sbjct: 49  AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACAC 108

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
               +   Q+H   +K+G   D ++ T L+  Y K   +E+  ++F  M E ++VVSWT+
Sbjct: 109 LSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEE-RNVVSWTS 167

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP-----AVSPFQVHAHIIKT 407
           ++ G+  NG    A+  F +M    ++PN FT++ +L A       A    Q+H  +IK 
Sbjct: 168 LLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKN 227

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
            +E +  V  +L+N Y K G++  A  VF+ +  +D ++W++M+AGY   G    A++++
Sbjct: 228 GFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMF 287

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
             L   GVK   F FSSVI +C A    +   +Q H   +K        + +AL+  Y+K
Sbjct: 288 YHLRLAGVKLTNFIFSSVIKSC-ANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNK 346

Query: 528 KGNIESASEVFKRQRK-RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
              I+ A ++F      R++VSW ++I G+ Q+G  ++A+ +F EM R+ +  +  TF  
Sbjct: 347 GREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFST 406

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           ++ A     +V   + +  ++ +++   P++   + ++D Y + G L +A  +  R+
Sbjct: 407 ILAA---QPVVSPFEVHAQVIKSDYEKSPSVG--TALLDAYVKLGNLNEASKVFERI 458



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 4/228 (1%)

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A  VF+   ++D+V  + +L  Y++       V ++  +    +  +  T S V+ AC  
Sbjct: 49  AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACAC 108

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
            S   + G Q H   +K+     + V ++LV MY K   +E    VF    +R++VSW S
Sbjct: 109 LSCK-KFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTS 167

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA-GLVDEGQQYFDIMVNE 610
           ++ GYA +G   +ALE F EM+   ++ +  TF  V+ A   +  + D+G Q    MV +
Sbjct: 168 LLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQ-IHTMVIK 226

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +    T+   + ++++YS++GM++ A  + + M     A  W +++A 
Sbjct: 227 NGFEATIFVCNSLINMYSKSGMVKNAKAVFDNM-VTRDAISWNSMVAG 273


>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
 gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/480 (74%), Positives = 414/480 (86%), Gaps = 14/480 (2%)

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           M+REG++PN FTYS ILTAQP VSPF++HA  IK NY KS SVGTALL+AYVK+G +DEA
Sbjct: 1   MSREGIKPNDFTYSTILTAQPGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEA 60

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
           +KVF+ I+EKDIVAWSAM+ GYAQIGDTEGAV+I+ Q+  E +KPNE+TFS +INAC AP
Sbjct: 61  SKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAP 120

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           +A VEQGKQ HA SIK++ NNALCVSSAL+TMYSK+G+IESA EVFKRQR+RDLVSWNS+
Sbjct: 121 TAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSI 180

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I GYAQHG+ +KALEVF+EM+RQ+LE DG+TFIGVI+ACTH GL +EGQ+YFDIMV +HH
Sbjct: 181 ISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHH 240

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------------- 659
           I P MEHYSCMVDLY RAGML KAM+IIN MPF ASA VWRT+LAA              
Sbjct: 241 IEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAA 300

Query: 660 -RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
            +LISLQP + A YVLL+NMYA+ G+W+ERA+VRKLM ++KVKK AGYSWIEVKNKTY+F
Sbjct: 301 DKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTF 360

Query: 719 LAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAF 778
           LAGD+SHP SNQIY+KLEELS +LK AGY+PDTSYV QD+D+EHKEAILSQHSERLAIAF
Sbjct: 361 LAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAF 420

Query: 779 GLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GL+ TP G PLQIVKNLRVCGDCH+VIKLIS LE RDIVVRD+NRFHHFK GLCSCGDYW
Sbjct: 421 GLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 139/243 (57%), Gaps = 6/243 (2%)

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H+Q +K       ++ T L+ AY K G +++ASK+F  + E KD+V+W+AMI G+ Q 
Sbjct: 27  EMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEE-KDIVAWSAMICGYAQI 85

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSV 415
           G  + AV  F QM +E ++PN +T+S I+ A  A +       Q+HA  IK+ +  +  V
Sbjct: 86  GDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCV 145

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
            +ALL  Y K+G ++ A +VF+   E+D+V+W+++++GYAQ G    A++++ ++  + +
Sbjct: 146 SSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNL 205

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
           + +  TF  VI+ACT    A E  + F        +   +   S +V +Y + G +  A 
Sbjct: 206 EMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGMLVKAM 265

Query: 536 EVF 538
           E+ 
Sbjct: 266 EII 268



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 131/264 (49%), Gaps = 12/264 (4%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H + +K  + +  +V T+L+D Y++  NV++  +VF  + E ++V+W++++ GYA+  
Sbjct: 27  EMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIG 86

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-ADEGIVATAVQVHTMVIKNGGEVVTSVC 217
             +  + +F +M  E IKPN +TFS ++    A    V    Q+H   IK+       V 
Sbjct: 87  DTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCVS 146

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           +AL++MY K   +  A  VF    +RD ++WNS+++GY  +    +A E F  M     E
Sbjct: 147 SALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLE 206

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR------TGLMVAYSKCGKM 331
           +   TF+ VI  C  T      ++    ++K     DH+I       + ++  Y + G +
Sbjct: 207 MDGVTFIGVISACTHTGLANEGQRYFDIMVK-----DHHIEPRMEHYSCMVDLYGRAGML 261

Query: 332 EDASKIFSMMREMKDVVSWTAMIS 355
             A +I + M        W  +++
Sbjct: 262 VKAMEIINEMPFPASANVWRTLLA 285



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 145/293 (49%), Gaps = 18/293 (6%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M  EGIKPN FT+ST+L   A  G+  +  ++H   IK       SV  AL+  Y+K   
Sbjct: 1   MSREGIKPNDFTYSTIL--TAQPGV--SPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           V +A  VF  +E++D + W++M+ GY        A   F  M     +    TF  +I  
Sbjct: 57  VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINA 116

Query: 290 CAT-TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           CA  T  +   +QLH+  +K+  +    + + L+  YSK G +E A ++F   RE +D+V
Sbjct: 117 CAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRE-RDLV 175

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHII 405
           SW ++ISG+ Q+G    A+  F +M R+ +  +G T+  +++A       +  Q +  I+
Sbjct: 176 SWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIM 235

Query: 406 KTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA----WSAMLA 452
             ++  E      + +++ Y + G+L    K  E+I+E    A    W  +LA
Sbjct: 236 VKDHHIEPRMEHYSCMVDLYGRAGML---VKAMEIINEMPFPASANVWRTLLA 285



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 110/223 (49%), Gaps = 3/223 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F R  +++ V ++ ++  Y +    + A+ +F+ + +  +     T S ++  C     
Sbjct: 63  VFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTA 122

Query: 94  HVF-GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            V  G+Q+H   +KS F   + VS++L+ +Y +  ++E    VF    E ++VSW S++S
Sbjct: 123 GVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIIS 182

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-E 211
           GYA++    + LE+F  MQ + ++ +  TF  V+      G+     +   +++K+   E
Sbjct: 183 GYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIE 242

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI-TWNSMVA 253
                 + ++ +Y ++ M+  A  + + M    S   W +++A
Sbjct: 243 PRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLA 285


>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 472

 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/471 (69%), Positives = 398/471 (84%), Gaps = 15/471 (3%)

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           FTYS+ILTA P +SP +VHA ++KTNYE+S +VGTALL+AYVK G ++EAAKVF  ID+K
Sbjct: 2   FTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 61

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           DIVAWSAMLAGYAQ G+TE A+K++ +LT  G+KPNEFTFSS++N C A +A++ QGKQF
Sbjct: 62  DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF 121

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H  +IK++L+++LCVSSAL+TMY+KKGNIESA EVFKRQR++DLVSWNSMI GYAQHG  
Sbjct: 122 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA 181

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            KAL+VFKEM+++ ++ DG+TFIGV  ACTHAGLV+EG++YFDIMV +  I PT EH SC
Sbjct: 182 MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC 241

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           MVDLYSRAG LEKAM +I  MP  A +T+WRT+LAACR              +I+++P D
Sbjct: 242 MVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPED 301

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           SA YVLLSNMYA +G WQERA+VRKLMN+R VKKE GYSWIEVKNKTYSFLAGD SHP  
Sbjct: 302 SAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLK 361

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
           +QIY KLE+LSTRLKD GY+PDTSYVLQDIDDEHKEA+L+QHSERLAIAFGL+ATP G+P
Sbjct: 362 DQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSP 421

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
           L I+KNLRVCGDCH VIKLI+K+E R+IVVRD+NRFHHF  +G+CSCGD+W
Sbjct: 422 LLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 38/350 (10%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           +VH + VK+ + R   V T+L+D Y++   VE+  +VF  +++ ++V+W+++L+GYA+  
Sbjct: 18  EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-ADEGIVATAVQVHTMVIKNGGEVVTSVC 217
             +  +++F  +   GIKPN FTFS++L V  A    +    Q H   IK+  +    V 
Sbjct: 78  ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 137

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           +AL++MY K   +  A  VF    ++D ++WNSM++GY  +   M+A + F  M     +
Sbjct: 138 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 197

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKN---GIDFDHNIRTGLMVAYSKCGKMEDA 334
           +   TF+ V   C     +    +    ++++       +HN  + ++  YS+ G++E A
Sbjct: 198 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN--SCMVDLYSRAGQLEKA 255

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            K+   M        W  +++               C++ ++          II     A
Sbjct: 256 MKVIENMPNPAGSTIWRTILAA--------------CRVHKKTELGRLAAEKII-----A 296

Query: 395 VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           + P    A+++             L N Y + G   E AKV +L++E+++
Sbjct: 297 MKPEDSAAYVL-------------LSNMYAESGDWQERAKVRKLMNERNV 333



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 28/289 (9%)

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           FT+S +L  L     V +  +VH  V+K   E  ++V  AL+  Y+K   V +A  VF G
Sbjct: 2   FTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 57

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK-ELRL 298
           ++D+D + W++M+AGY        A + F  +   G +    TF S++ +CA T   +  
Sbjct: 58  IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 117

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +Q H   +K+ +D    + + L+  Y+K G +E A ++F   RE KD+VSW +MISG+ 
Sbjct: 118 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE-KDLVSWNSMISGYA 176

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV--- 415
           Q+G    A++ F +M +  V+ +G T+  +  A         HA +++   EK F +   
Sbjct: 177 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA-------CTHAGLVEEG-EKYFDIMVR 228

Query: 416 ----------GTALLNAYVKKGILDEAAKVFE-LIDEKDIVAWSAMLAG 453
                      + +++ Y + G L++A KV E + +      W  +LA 
Sbjct: 229 DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 277



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 107/224 (47%), Gaps = 3/224 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F     ++ V ++ +L  Y +    + A+ +F  + + G+     T SS+L  C     
Sbjct: 54  VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 113

Query: 94  HVF-GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            +  G+Q H   +KS     + VS++L+ +Y +  N+E    VF    E ++VSW S++S
Sbjct: 114 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 173

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GYA++    + L++F  M+   +K +  TF  V       G+V    +   +++++    
Sbjct: 174 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 233

Query: 213 VTSVCNA-LISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAG 254
            T   N+ ++ +Y ++  +  A  V + M +   S  W +++A 
Sbjct: 234 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 277


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/816 (39%), Positives = 498/816 (61%), Gaps = 20/816 (2%)

Query: 41   RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQV 100
            R+ V YN L+    +   ++EA   +  +R  G+ +  +T  SVL  C        G  +
Sbjct: 348  RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELI 407

Query: 101  HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN 160
            H    + G + DV +  SL+ +Y R  ++   R +F+ M + +++SW ++++GYAR +  
Sbjct: 408  HSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDR 467

Query: 161  DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
               ++L+ +MQ EG+KP   TF  +L    +    +    +H  ++++G +    + NAL
Sbjct: 468  GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527

Query: 221  ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
            ++MY +   + +A+ VF+G   RD I+WNSM+AG+  +  +  A++ F  M   G E  +
Sbjct: 528  MNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587

Query: 281  STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
             TF SV+  C   + L L RQ+H  ++++G+  D N+   L+  Y +CG ++DA ++F  
Sbjct: 588  ITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHS 647

Query: 341  MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-- 398
            +R  ++V+SWTAMI G    G    A   F QM  +G +P   T+S IL A  + +    
Sbjct: 648  LRH-RNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDE 706

Query: 399  --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
              +V AHI+ + YE    VG AL++AY K G + +A KVF+ +  +DI++W+ M+AGYAQ
Sbjct: 707  GKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQ 766

Query: 457  IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
             G    A++   Q+  +GV  N+F+F S++NAC++ SA +E+GK+ HA  +K K+   + 
Sbjct: 767  NGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSA-LEEGKRVHAEIVKRKMQGDVR 825

Query: 517  VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
            V +AL++MY+K G++E A EVF    ++++V+WN+MI  YAQHG   KAL+ F  M ++ 
Sbjct: 826  VGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEG 885

Query: 577  LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
            ++ DG TF  +++AC H+GLV EG + F  + ++H + PT+EHY C+V L  RAG  ++A
Sbjct: 886  IKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEA 945

Query: 637  MDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAAT 682
              +IN+MPF   A VW T+L ACR+              + L   + A+YVLLSN+YAA 
Sbjct: 946  ETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAA 1005

Query: 683  GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
            G W + A++R++M  R ++KE G SWIEV N  + F+A D SHP++ +IY +L+ LS  +
Sbjct: 1006 GRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEM 1065

Query: 743  KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
            + AGY PDT YVL ++D EH+E  L  HSERLAIA+GL+ TP G P++I KNLR+CGDCH
Sbjct: 1066 ERAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCH 1125

Query: 803  TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            T  K ISKL  R+I+ RD+NRFH FK G CSC D+W
Sbjct: 1126 TASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 175/615 (28%), Positives = 336/615 (54%), Gaps = 7/615 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F + P+R+ + +N L+  Y +    ++A  LF  ++  G      T  S+L  C    +
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             +G+++H + +++G+ RD  V  SL+++Y +  ++   R+VF  +   +VVS+ ++L  
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGL 258

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+    +  + LF +M  EGI P+  T+  +L       ++    ++H + +  G    
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD 318

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL +M+++   V  A+   +   DRD + +N+++A    +  + EAFE +  M  
Sbjct: 319 IRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRS 378

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G  + R+T++SV+  C+T+K L     +HS + + G   D  I   L+  Y++CG +  
Sbjct: 379 DGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPR 438

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F+ M + +D++SW A+I+G+ +      A+  + QM  EGV+P   T+  +L+A  
Sbjct: 439 ARELFNTMPK-RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACT 497

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             S +     +H  I+++  + +  +  AL+N Y + G + EA  VFE    +DI++W++
Sbjct: 498 NSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNS 557

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+AG+AQ G  E A K++ ++  EG++P++ TF+SV+  C  P  A+E G+Q H   I++
Sbjct: 558 MIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPE-ALELGRQIHMLIIES 616

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L   + + +AL+ MY + G+++ A EVF   R R+++SW +MI G+A  G  +KA E+F
Sbjct: 617 GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELF 676

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M+    +    TF  ++ AC  +  +DEG++    ++N  +   T    + ++  YS+
Sbjct: 677 WQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVG-NALISAYSK 735

Query: 630 AGMLEKAMDIINRMP 644
           +G +  A  + ++MP
Sbjct: 736 SGSMTDARKVFDKMP 750



 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 168/608 (27%), Positives = 334/608 (54%), Gaps = 11/608 (1%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK--TCGCLFDHVFG 97
           +R+ V YN +L  Y + +  +E + LF  +   G+P    T  ++L   T   + D   G
Sbjct: 246 RRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE--G 303

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++H   V  G   D+ V T+L  +++R  +V   ++  +   + +VV + +L++  A++
Sbjct: 304 KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQH 363

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              +   E +++M+ +G+  N  T+ +VL   +    +     +H+ + + G      + 
Sbjct: 364 GHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIG 423

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+LISMY +   +  AR +F+ M  RD I+WN+++AGY   E   EA + +  M   G +
Sbjct: 424 NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             R TF+ ++  C  +      + +H  +L++GI  + ++   LM  Y +CG + +A  +
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNV 543

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPAV 395
           F   R  +D++SW +MI+GH Q+G+ + A   F +M +EG+ P+  T++ +L     P  
Sbjct: 544 FEGTR-ARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEA 602

Query: 396 SPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                Q+H  II++  +   ++G AL+N Y++ G L +A +VF  +  +++++W+AM+ G
Sbjct: 603 LELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGG 662

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +A  G+   A +++ Q+ ++G KP + TFSS++ AC + SA +++GK+  A  + +    
Sbjct: 663 FADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMS-SACLDEGKKVIAHILNSGYEL 721

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
              V +AL++ YSK G++  A +VF +   RD++SWN MI GYAQ+G    AL+   +M+
Sbjct: 722 DTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQ 781

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
            Q +  +  +F+ ++ AC+    ++EG++    +V +  +   +   + ++ +Y++ G L
Sbjct: 782 EQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIV-KRKMQGDVRVGAALISMYAKCGSL 840

Query: 634 EKAMDIIN 641
           E+A ++ +
Sbjct: 841 EEAQEVFD 848



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 300/550 (54%), Gaps = 7/550 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++H + V++G   D+ +S  L+++Y++  +V D  +VF  M   +V+SW SL+S YA+ 
Sbjct: 102 KRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQ 161

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
               +  +LF  MQ  G  P+  T+ ++L        +    ++H+ +I+ G +    V 
Sbjct: 162 GFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQ 221

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+L++MY K + +  AR VF G+  RD +++N+M+  Y       E    F  M   G  
Sbjct: 222 NSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIP 281

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             + T+++++    T   L   +++H   +  G++ D  + T L   + +CG +  A + 
Sbjct: 282 PDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQA 341

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
                + +DVV + A+I+   Q+G  + A   + QM  +GV  N  TY  +L A      
Sbjct: 342 LEAFAD-RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKA 400

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                 +H+HI +  +     +G +L++ Y + G L  A ++F  + ++D+++W+A++AG
Sbjct: 401 LGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAG 460

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           YA+  D   A+K+Y+Q+ SEGVKP   TF  +++ACT  S+A   GK  H   +++ + +
Sbjct: 461 YARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN-SSAYSDGKMIHEDILRSGIKS 519

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
              +++AL+ MY + G+I  A  VF+  R RD++SWNSMI G+AQHG  + A ++F EM+
Sbjct: 520 NGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMK 579

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           ++ LE D ITF  V+  C +   ++ G+Q   +++ E  +   +   + ++++Y R G L
Sbjct: 580 KEGLEPDKITFASVLVGCKNPEALELGRQ-IHMLIIESGLQLDVNLGNALINMYIRCGSL 638

Query: 634 EKAMDIINRM 643
           + A ++ + +
Sbjct: 639 QDAYEVFHSL 648



 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 291/541 (53%), Gaps = 6/541 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + LF+  P+R+ + +N ++  Y R     EA+ L+  ++  G+     T   +L  C 
Sbjct: 438 RARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACT 497

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
               +  G+ +H + ++SG   + +++ +L+++Y R  ++ + + VF+     +++SW S
Sbjct: 498 NSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNS 557

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G+A++   +   +LF  M+ EG++P+  TF++VL    +   +    Q+H ++I++G
Sbjct: 558 MIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESG 617

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            ++  ++ NALI+MY++   ++DA  VF  +  R+ ++W +M+ G+       +AFE F 
Sbjct: 618 LQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFW 677

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G +  +STF S++K C ++  L   +++ + +L +G + D  +   L+ AYSK G
Sbjct: 678 QMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSG 737

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            M DA K+F  M   +D++SW  MI+G+ QNG    A+ F  QM  +GV  N F++  IL
Sbjct: 738 SMTDARKVFDKMPN-RDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSIL 796

Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A  + S  +    VHA I+K   +    VG AL++ Y K G L+EA +VF+   EK++V
Sbjct: 797 NACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVV 856

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+AM+  YAQ G    A+  +  +  EG+KP+  TF+S+++AC      +E  + F + 
Sbjct: 857 TWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSL 916

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKK 564
             +  L+  +     LV +  + G  + A  +  +     D   W +++     HG+   
Sbjct: 917 ESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVAL 976

Query: 565 A 565
           A
Sbjct: 977 A 977



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 249/450 (55%), Gaps = 7/450 (1%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +A A ++H  +++ G      + N LI+MY+K + V DA  VF  M  RD I+WNS+++ 
Sbjct: 98  LAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISC 157

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           Y       +AF+ F  M  AG   ++ T++S++  C +  EL   +++HS++++ G   D
Sbjct: 158 YAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRD 217

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             ++  L+  Y KC  +  A ++FS +   +DVVS+  M+  + Q   ++  +  F QM+
Sbjct: 218 PRVQNSLLNMYGKCEDLPSARQVFSGIYR-RDVVSYNTMLGLYAQKAYVEECIGLFGQMS 276

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
            EG+ P+  TY  +L A    S      ++H   +         VGTAL   +V+ G + 
Sbjct: 277 SEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVA 336

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            A +  E   ++D+V ++A++A  AQ G  E A + Y Q+ S+GV  N  T+ SV+NAC+
Sbjct: 337 GAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACS 396

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
             S A+  G+  H+   +   ++ + + ++L++MY++ G++  A E+F    KRDL+SWN
Sbjct: 397 T-SKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           ++I GYA+     +A++++K+M+ + ++   +TF+ +++ACT++    +G+   + ++  
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS 515

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
             I       + ++++Y R G + +A ++ 
Sbjct: 516 -GIKSNGHLANALMNMYRRCGSIMEAQNVF 544



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 212/386 (54%), Gaps = 8/386 (2%)

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  R+ +V +++ C   + L  A+++H+Q+++ G+  D  +   L+  Y KC  + DA +
Sbjct: 79  ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPA 394
           +F  M   +DV+SW ++IS + Q G    A   F +M   G  P+  TY  ILTA   PA
Sbjct: 139 VFLKMPR-RDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197

Query: 395 VSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
              +  ++H+ II+  Y++   V  +LLN Y K   L  A +VF  I  +D+V+++ ML 
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG 257

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            YAQ    E  + ++ Q++SEG+ P++ T+ ++++A T PS  +++GK+ H  ++   LN
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPS-MLDEGKRIHKLAVNEGLN 316

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           + + V +AL TM+ + G++  A +  +    RD+V +N++I   AQHGH ++A E + +M
Sbjct: 317 SDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQM 376

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R   +  +  T++ V+ AC+ +  +  G+     +    H    ++  + ++ +Y+R G 
Sbjct: 377 RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH-SSDVQIGNSLISMYARCGD 435

Query: 633 LEKAMDIINRMPFAASATVWRTVLAA 658
           L +A ++ N MP       W  ++A 
Sbjct: 436 LPRARELFNTMP-KRDLISWNAIIAG 460


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 321/822 (39%), Positives = 496/822 (60%), Gaps = 20/822 (2%)

Query: 35   FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
            F  +  R+ V YN L+    +   + EA   +  +R  G+ L  +T  S+L  C      
Sbjct: 287  FKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKAL 346

Query: 95   VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
              G+ +H    + G + DV +  +L+ +Y R  ++   R +F  M + +++SW ++++GY
Sbjct: 347  EAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGY 406

Query: 155  ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            AR +     + L+ +MQ EG+KP   TF  +L   A+    A    +H  ++++G +   
Sbjct: 407  ARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNG 466

Query: 215  SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
             + NAL++MY +   + +A+ VF+G + RD I+WNSM+AG+  +  +  A++ F  M   
Sbjct: 467  HLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE 526

Query: 275  GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
              E    TF SV+  C   + L L +Q+H ++ ++G+  D N+   L+  Y +CG ++DA
Sbjct: 527  ELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDA 586

Query: 335  SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
              +F  ++  +DV+SWTAMI G    G    A+  F QM  EG RP   T+S IL    +
Sbjct: 587  RNVFHSLQH-RDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTS 645

Query: 395  VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
             +      +V A+I+ + YE    VG AL++AY K G + +A +VF+ +  +DIV+W+ +
Sbjct: 646  SACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKI 705

Query: 451  LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
            +AGYAQ G  + AV+   Q+  + V PN+F+F S++NAC++ SA +E+GK+ HA  +K K
Sbjct: 706  IAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSA-LEEGKRVHAEIVKRK 764

Query: 511  LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            L   + V +AL++MY+K G+   A EVF    ++++V+WN+MI  YAQHG   KAL  F 
Sbjct: 765  LQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFN 824

Query: 571  EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
             M ++ ++ DG TF  +++AC HAGLV EG Q F  M +E+ + PT+EHY C+V L  RA
Sbjct: 825  CMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRA 884

Query: 631  GMLEKAMDIINRMPFAASATVWRTVLAACRL---ISLQPH-----------DSAIYVLLS 676
               ++A  +IN+MPF   A VW T+L ACR+   I+L  H           + A+Y+LLS
Sbjct: 885  RRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLS 944

Query: 677  NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
            N+YAA G W + A++R++M  R ++KE G SWIEV N  + F+A D SHP++ +IY++L+
Sbjct: 945  NVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELK 1004

Query: 737  ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
             LS  +++AGY PDT +VL D+   H+E  L  HSERLAIA+GL+ TP G P++I KNLR
Sbjct: 1005 RLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLR 1064

Query: 797  VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +CGDCHT  K ISKL  R+I+ RD+NRFH FK G CSC DYW
Sbjct: 1065 ICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 179/629 (28%), Positives = 341/629 (54%), Gaps = 8/629 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F   P+R+ + +N L+  Y +    ++A  LF  ++  G      T  S+L  C    +
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+++H + +K+G+ RD  V  SL+ +Y +  ++   R+VF  ++  +VVS+ ++L  
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+       L LF +M  EGI P+  T+  +L       ++    ++H + ++ G    
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL++M ++   V  A+  F G  DRD + +N+++A    +  ++EAFE +  M  
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G  L R+T++S++  C+T+K L   + +HS + ++G   D  I   L+  Y++CG +  
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M + +D++SW A+I+G+ +      A+  + QM  EGV+P   T+  +L+A  
Sbjct: 384 ARELFYTMPK-RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             S +     +H  I+++  + +  +  AL+N Y + G L EA  VFE    +D+++W++
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+AG+AQ G  E A K+++++ +E ++P+  TF+SV++ C  P  A+E GKQ H    ++
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE-ALELGKQIHGRITES 561

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L   + + +AL+ MY + G+++ A  VF   + RD++SW +MI G A  G   KA+E+F
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M+ +       TF  ++  CT +  +DEG++    ++N  +   T    + ++  YS+
Sbjct: 622 WQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVG-NALISAYSK 680

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +G +  A ++ ++MP +     W  ++A 
Sbjct: 681 SGSMTDAREVFDKMP-SRDIVSWNKIIAG 708



 Score =  295 bits (755), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 307/566 (54%), Gaps = 8/566 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++H + V++    D+ +S  L+++Y++  +V D  +VF +M   +V+SW SL+S YA+ 
Sbjct: 47  KRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQ 106

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
               +  +LF  MQ  G  PN  T+ ++L        +    ++H+ +IK G +    V 
Sbjct: 107 GFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQ 166

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+L+SMY K   +  AR VF G+  RD +++N+M+  Y       E    F  M   G  
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             + T+++++    T   L   +++H   ++ G++ D  + T L+    +CG ++ A + 
Sbjct: 227 PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQA 286

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F    + +DVV + A+I+   Q+G    A   + +M  +GV  N  TY  IL A      
Sbjct: 287 FKGTAD-RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKA 345

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            +    +H+HI +  +     +G AL++ Y + G L +A ++F  + ++D+++W+A++AG
Sbjct: 346 LEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAG 405

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           YA+  D   A+++Y+Q+ SEGVKP   TF  +++AC A S+A   GK  H   +++ + +
Sbjct: 406 YARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC-ANSSAYADGKMIHEDILRSGIKS 464

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
              +++AL+ MY + G++  A  VF+  + RD++SWNSMI G+AQHG  + A ++F+EM+
Sbjct: 465 NGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQ 524

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
            ++LE D ITF  V++ C +   ++ G+Q     + E  +   +   + ++++Y R G L
Sbjct: 525 NEELEPDNITFASVLSGCKNPEALELGKQIHG-RITESGLQLDVNLGNALINMYIRCGSL 583

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC 659
           + A ++ + +        W  ++  C
Sbjct: 584 QDARNVFHSLQH-RDVMSWTAMIGGC 608



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 263/472 (55%), Gaps = 5/472 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + LF   P+R+ + +N ++  Y R     EA+ L+  ++  G+     T   +L  C 
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
               +  G+ +H + ++SG   + +++ +L+++Y R  ++ + + VF+     +V+SW S
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G+A++   +   +LF  MQ E ++P++ TF++VL    +   +    Q+H  + ++G
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            ++  ++ NALI+MY++   ++DAR VF  ++ RD ++W +M+ G       M+A E F 
Sbjct: 563 LQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFW 622

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G    +STF S++K+C ++  L   +++ + +L +G + D  +   L+ AYSK G
Sbjct: 623 QMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSG 682

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            M DA ++F  M   +D+VSW  +I+G+ QNG    AV F  QM  + V PN F++  +L
Sbjct: 683 SMTDAREVFDKMPS-RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLL 741

Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A  + S  +    VHA I+K   +    VG AL++ Y K G   EA +VF+ I EK++V
Sbjct: 742 NACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVV 801

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            W+AM+  YAQ G    A+  +  +  EG+KP+  TF+S+++AC      +E
Sbjct: 802 TWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLE 853



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 217/386 (56%), Gaps = 8/386 (2%)

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  R+T+V++++ C   + L  A+++H+Q+++  +  D  +   L+  Y KC  + DA +
Sbjct: 24  ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPA 394
           +F  M   +DV+SW ++IS + Q G    A   F +M   G  PN  TY  ILTA   PA
Sbjct: 84  VFKEMPR-RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 395 --VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
              +  ++H+ IIK  Y++   V  +LL+ Y K G L  A +VF  I  +D+V+++ ML 
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLG 202

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            YAQ    +  + ++ Q++SEG+ P++ T+ ++++A T PS  +++GK+ H  +++  LN
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS-MLDEGKRIHKLTVEEGLN 261

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           + + V +ALVTM  + G+++SA + FK    RD+V +N++I   AQHGH  +A E +  M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R   +  +  T++ ++ AC+ +  ++ G+     +  + H    ++  + ++ +Y+R G 
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH-SSDVQIGNALISMYARCGD 380

Query: 633 LEKAMDIINRMPFAASATVWRTVLAA 658
           L KA ++   MP       W  ++A 
Sbjct: 381 LPKARELFYTMP-KRDLISWNAIIAG 405


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  636 bits (1641), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 333/785 (42%), Positives = 478/785 (60%), Gaps = 20/785 (2%)

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
           LG+        SVLK C    D V G+QVH   V +GF  D  V+ SLV LY +     D
Sbjct: 4   LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
            R +FD + + +VVSW +L S Y  + M+   + LFH M + GI+PN F+ S+++ V   
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
                   ++H  +IK G +      NAL+ MY K  ++ DA +VFD +   D ++WN++
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +AG V +E H  A E    M  +G      T  S +K CA      L RQLHS ++K  +
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
             D  +  GL+  YSKC  M+DA  +F +M E +D+++W A+ISGH QN   + A + F 
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPE-RDMIAWNAVISGHSQNEEDEEAASLFP 302

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
            M  EG+  N  T S +L +  A+       Q+HA  +K+ +E    V  +L++ Y K G
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +++A +VFE     D+V +++++  YAQ G  E A+++Y ++   G+KP+ F  SS++N
Sbjct: 363 HVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           AC + SA  EQGKQ H   +K    + +   ++LV MY+K G+IE AS  F R   R +V
Sbjct: 423 ACASLSA-YEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIV 481

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SW++MI G AQHG+ K+AL++FK+M +  +  + IT + V+ AC HAGLV E + YF+ M
Sbjct: 482 SWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSM 541

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------- 660
                I P  EHY+CM+DL  RAG LE AM+++N+MPF A+A VW  +L A R       
Sbjct: 542 KILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDL 601

Query: 661 -------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKN 713
                  L++L+P  S  +VLL+N+YA+ G W + ARVR+LM D KVKKE G SW+EVK+
Sbjct: 602 GEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKD 661

Query: 714 KTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSER 773
           K Y+F+ GD SH +S +IY+KL+ELS  LK AGY P     L D++   KE +L  HSE+
Sbjct: 662 KVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEK 721

Query: 774 LAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCS 833
           LA+AFGL+ATP GAP+++ KNLR+C DCHTV+K ISK+  R+I+VRDTNRFHHF+EG CS
Sbjct: 722 LAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCS 781

Query: 834 CGDYW 838
           CG+YW
Sbjct: 782 CGEYW 786



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 164/527 (31%), Positives = 283/527 (53%), Gaps = 6/527 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +SLFD  P R+ V +N L   Y    +H EA++LF  +   G+     +LSS++  C  L
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V GR++H   +K G+  D   + +LVD+Y +   +ED   VFD++ + ++VSW +++
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G   ++ + R LEL   M   G+ PN FT S+ L   A   +     Q+H+ +IK    
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG 244

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             + +   LI MY K   + DAR VF  M +RD I WN++++G+  NE   EA   F  M
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLM 304

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G    ++T  +V+K  A  +   + RQ+H+  LK+G +FD+ +   L+  Y KCG +
Sbjct: 305 HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHV 364

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           EDA+++F     + D+V +T++++ + Q+G  + A+  + +M   G++P+ F  S +L A
Sbjct: 365 EDATRVFE-ESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNA 423

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             ++S +    QVH HI+K  +      G +L+N Y K G +++A+  F  I  + IV+W
Sbjct: 424 CASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSW 483

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           SAM+ G AQ G  + A+++++Q+   GV PN  T  SV+ AC       E    F++  I
Sbjct: 484 SAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKI 543

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMI 553
              +       + ++ +  + G +E+A E V K   + + + W +++
Sbjct: 544 LFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALL 590



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 258/479 (53%), Gaps = 7/479 (1%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M + GIK N F F +VL        +    QVH +V+  G +    V N+L+ +Y K   
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
             DAR++FD + DR  ++WN++ + YV +++H EA   F++M L+G      +  S+I +
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C   ++    R++H  ++K G D D      L+  Y+K G +EDAS +F  + +  D+VS
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK-PDIVS 179

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHAHII 405
           W A+I+G + +     A+    +M + G+ PN FT S  L A   ++      Q+H+ +I
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K +      +G  L++ Y K   +D+A  VF+L+ E+D++AW+A+++G++Q  + E A  
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++  + +EG+  N+ T S+V+ +  A  A     +Q HA S+K+       V ++L+  Y
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANY-MCRQIHALSLKSGFEFDNYVVNSLIDTY 358

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
            K G++E A+ VF+     DLV + S++  YAQ G  ++AL ++ EM+ + ++ D     
Sbjct: 359 GKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCS 418

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
            ++ AC      ++G+Q   + + +      +   + +V++Y++ G +E A    +R+P
Sbjct: 419 SLLNACASLSAYEQGKQ-VHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  626 bits (1614), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 305/825 (36%), Positives = 506/825 (61%), Gaps = 21/825 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +++   +N LL  Y +  L++EA  L   + +  +     T  S+L  C   
Sbjct: 165 KQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADA 224

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   GR+++   +K+G+  D+ V T+L++++++  ++ D  +VFD++   ++V+WTS++
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMI 284

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G AR+    +   LF RM+ EG++P+   F ++L        +    +VH  + + G +
Sbjct: 285 TGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWD 344

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  A++SMY K   + DA  VFD ++ R+ ++W +M+AG+  +    EAF  FN M
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM 404

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G E  R TF+S++  C++   L+  +Q+   +++ G   D  +RT L+  Y+KCG +
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSL 464

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA ++F  + + ++VV+W AMI+ ++Q+   D A+  F  + +EG++PN  T++ IL  
Sbjct: 465 KDAHRVFEKISK-QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +    +    VH  I+K   E    V  AL++ +V  G L  A  +F  + ++D+V+W
Sbjct: 524 CKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSW 583

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + ++AG+ Q G  + A   ++ +   G+KP++ TF+ ++NAC +P A  E G++ HA   
Sbjct: 584 NTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTE-GRRLHALIT 642

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +A  +  + V + L++MY+K G+IE A +VF +  K+++ SW SMI GYAQHG  K+ALE
Sbjct: 643 EAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALE 702

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F +M+++ ++ D ITF+G ++AC HAGL++EG  +F  M  E +I P MEHY CMVDL+
Sbjct: 703 LFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLF 761

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYV 673
            RAG+L +A++ I +M     + VW  +L AC++              + L P+D+ ++V
Sbjct: 762 GRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFV 821

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           +LSN+YAA G W+E A++RK+M DR V K+ G SWIEV  K ++F + D +HPQ+ +I++
Sbjct: 822 ILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHA 881

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           +LE L   ++  GY PDT YVL D++D  KE  L  HSERLAI +GL+ TP   P+ I K
Sbjct: 882 ELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISK 941

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVCGDCHT  K ISK+ +R I+ RD+NRFHHFK+G+CSCGD+W
Sbjct: 942 NLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 198/623 (31%), Positives = 340/623 (54%), Gaps = 22/623 (3%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           N +L    +     EA+ +   +    + ++  T S++L+ C    +   G +++    K
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           SG   D+ +  +L+++Y +  N    +++FDDM E +V SW  LL GY ++ + +   +L
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
             +M  + +KP+  TF ++L   AD   V    +++ +++K G +    V  ALI+M++K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              + DA  VFD +  RD +TW SM+ G   +    +A   F  M   G +  +  FVS+
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           ++ C   + L   +++H+++ + G D +  + T ++  Y+KCG MEDA ++F +++  ++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG-RN 377

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHA 402
           VVSWTAMI+G  Q+G ID A  FF +M   G+ PN  T+  IL A  + S      Q+  
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           HII+  Y     V TALL+ Y K G L +A +VFE I ++++VAW+AM+  Y Q    + 
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN 497

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+  ++ L  EG+KPN  TF+S++N C + S ++E GK  H   +KA L + L VS+ALV
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKS-SDSLELGKWVHFLIMKAGLESDLHVSNALV 556

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           +M+   G++ SA  +F    KRDLVSWN++I G+ QHG  + A + FK M+   ++ D I
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-------MVDLYSRAGMLEK 635
           TF G++ AC     + EG++         H   T   + C       ++ +Y++ G +E 
Sbjct: 617 TFTGLLNACASPEALTEGRRL--------HALITEAAFDCDVLVGTGLISMYTKCGSIED 668

Query: 636 AMDIINRMPFAASATVWRTVLAA 658
           A  + +++P   +   W +++A 
Sbjct: 669 AHQVFHKLP-KKNVYSWTSMIAG 690



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 8/332 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K    +F++  ++N V +N ++  Y +   +  AL  F  + + G+    ST +S+L  C
Sbjct: 465 KDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+ VH   +K+G   D++VS +LV +++   ++   + +F+DM + ++VSW 
Sbjct: 525 KSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWN 584

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++G+ ++  N    + F  MQ  GIKP+  TF+ +L   A    +    ++H ++ + 
Sbjct: 585 TIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEA 644

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             +    V   LISMY K   + DA  VF  +  ++  +W SM+AGY  +    EA E F
Sbjct: 645 AFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELF 704

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT---GLMV-A 324
             M   G +    TFV  +  CA    +      H Q +K   +F+   R    G MV  
Sbjct: 705 YQMQQEGVKPDWITFVGALSACAHAGLIEEGLH-HFQSMK---EFNIEPRMEHYGCMVDL 760

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           + + G + +A +    M+   D   W A++  
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  625 bits (1613), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 305/825 (36%), Positives = 506/825 (61%), Gaps = 21/825 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +++   +N LL  Y +  L++EA  L   + +  +     T  S+L  C   
Sbjct: 165 KQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADA 224

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   GR+++   +K+G+  D+ V T+L++++++  ++ D  +VFD++   ++V+WTS++
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMI 284

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G AR+    +   LF RM+ EG++P+   F ++L        +    +VH  + + G +
Sbjct: 285 TGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWD 344

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  A++SMY K   + DA  VFD ++ R+ ++W +M+AG+  +    EAF  FN M
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM 404

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G E  R TF+S++  C++   L+  +Q+   +++ G   D  +RT L+  Y+KCG +
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSL 464

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA ++F  + + ++VV+W AMI+ ++Q+   D A+  F  + +EG++PN  T++ IL  
Sbjct: 465 KDAHRVFEKISK-QNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +    +    VH  I+K   E    V  AL++ +V  G L  A  +F  + ++D+V+W
Sbjct: 524 CKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSW 583

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + ++AG+ Q G  + A   ++ +   G+KP++ TF+ ++NAC +P A  E G++ HA   
Sbjct: 584 NTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTE-GRRLHALIT 642

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +A  +  + V + L++MY+K G+IE A +VF +  K+++ SW SMI GYAQHG  K+ALE
Sbjct: 643 EAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALE 702

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F +M+++ ++ D ITF+G ++AC HAGL++EG  +F  M  E +I P MEHY CMVDL+
Sbjct: 703 LFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLF 761

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYV 673
            RAG+L +A++ I +M     + VW  +L AC++              + L P+D+ ++V
Sbjct: 762 GRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFV 821

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           +LSN+YAA G W+E A++RK+M DR V K+ G SWIEV  K ++F + D +HPQ+ +I++
Sbjct: 822 ILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHA 881

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           +LE L   ++  GY PDT YVL D++D  KE  L  HSERLAI +GL+ TP   P+ I K
Sbjct: 882 ELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISK 941

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVCGDCHT  K ISK+ +R I+ RD+NRFHHFK+G+CSCGD+W
Sbjct: 942 NLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 196/609 (32%), Positives = 334/609 (54%), Gaps = 21/609 (3%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           N +L    +     EA+ +   +    + ++  T S++L+ C    +   G +++    K
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           SG   D+ +  +L+++Y +  N    +++FDDM E +V SW  LL GY ++ + +   +L
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
             +M  + +KP+  TF ++L   AD   V    +++ +++K G +    V  ALI+M++K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              + DA  VFD +  RD +TW SM+ G   +    +A   F  M   G +  +  FVS+
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           ++ C   + L   +++H+++ + G D +  + T ++  Y+KCG MEDA ++F +++  ++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG-RN 377

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHA 402
           VVSWTAMI+G  Q+G ID A  FF +M   G+ PN  T+  IL A  + S      Q+  
Sbjct: 378 VVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQD 437

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           HII+  Y     V TALL+ Y K G L +A +VFE I ++++VAW+AM+  Y Q    + 
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDN 497

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+  ++ L  EG+KPN  TF+S++N C + S ++E GK  H   +KA L + L VS+ALV
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKS-SDSLELGKWVHFLIMKAGLESDLHVSNALV 556

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           +M+   G++ SA  +F    KRDLVSWN++I G+ QHG  + A + FK M+   ++ D I
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-------MVDLYSRAGMLEK 635
           TF G++ AC     + EG++         H   T   + C       ++ +Y++ G +E 
Sbjct: 617 TFTGLLNACASPEALTEGRRL--------HALITEAAFDCDVLVGTGLISMYTKCGSIED 668

Query: 636 AMDIINRMP 644
           A  + +++P
Sbjct: 669 AHQVFHKLP 677



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 157/332 (47%), Gaps = 8/332 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K    +F++  ++N V +N ++  Y +   +  AL  F  + + G+    ST +S+L  C
Sbjct: 465 KDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+ VH   +K+G   D++VS +LV +++   ++   + +F+DM + ++VSW 
Sbjct: 525 KSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWN 584

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++G+ ++  N    + F  MQ  GIKP+  TF+ +L   A    +    ++H ++ + 
Sbjct: 585 TIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEA 644

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             +    V   LISMY K   + DA  VF  +  ++  +W SM+ GY  +    EA E F
Sbjct: 645 AFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELF 704

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT---GLMV-A 324
             M   G +    TFV  +  CA    +      H Q +K   +F+   R    G MV  
Sbjct: 705 YQMQQEGVKPDWITFVGALSACAHAGLIEEGLH-HFQSMK---EFNIEPRMEHYGCMVDL 760

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           + + G + +A +    M+   D   W A++  
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 312/817 (38%), Positives = 492/817 (60%), Gaps = 20/817 (2%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           +R    +N ++  Y +    ++AL L   +++ GL    +T+ S L +C       +GR+
Sbjct: 88  ERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGRE 147

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H + +++G   DV V+  ++++Y +  ++E+ R VFD M + +VVSWT  + GYA    
Sbjct: 148 IHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGR 207

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
           ++   E+F +M+ EG+ PN  T+ +VL   +    +     VH+ ++  G E  T+V  A
Sbjct: 208 SETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTA 267

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L+ MY K    +D R VF+ + +RD I WN+M+ G        EA E +N M   G    
Sbjct: 268 LVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPN 327

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           + T+V ++  C  +  L   +++HS+V K G   D  ++  L+  YS+CG ++DA  +F 
Sbjct: 328 KITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFD 387

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPAVSP 397
            M   KDV+SWTAMI G  ++G    A+  + +M + GV PN  TY+ IL A   PA   
Sbjct: 388 KMVR-KDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALE 446

Query: 398 F--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
           +  ++H  +++        VG  L+N Y   G + +A +VF+ + ++DIVA++AM+ GYA
Sbjct: 447 WGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYA 506

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
                + A+K++ +L  EG+KP++ T+ +++NAC A S ++E  ++ H    K    +  
Sbjct: 507 AHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC-ANSGSLEWAREIHTLVRKGGFFSDT 565

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V +ALV+ Y+K G+   AS VF++  KR+++SWN++I G AQHG  + AL++F+ M+ +
Sbjct: 566 SVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKME 625

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            ++ D +TF+ +++AC+HAGL++EG++YF  M  +  I PT+EHY CMVDL  RAG L++
Sbjct: 626 GVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDE 685

Query: 636 AMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAA 681
           A  +I  MPF A+  +W  +L ACR+              + L   ++ +YV LS+MYAA
Sbjct: 686 AEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAA 745

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
            G W   A++RKLM  R V KE G SWI+V +K + F+A D SHPQS +IY++L+ L+  
Sbjct: 746 AGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHA 805

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +K  GY PDT  V+ D+D+  KE  +  HSERLAIA+GL++TP G  + I KNLRVC DC
Sbjct: 806 MKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDC 865

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           HT  K ISK+  R+I+ RD NRFHHFK+G+CSCGDYW
Sbjct: 866 HTATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 170/588 (28%), Positives = 317/588 (53%), Gaps = 9/588 (1%)

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           A+++   +++ G  +  S    +LK C  + D V GRQVH   ++     D     +L++
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 122 LYMRTNNVEDGRRVFDDMN--ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
           +Y++  ++E+ R+V+  ++  E  V SW +++ GY +    ++ L+L  +MQ  G+ P+ 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            T  + L      G +    ++H   ++ G      V N +++MY K   + +AR VFD 
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           ME +  ++W   + GY        AFE F  M   G    R T++SV+   ++   L+  
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           + +HS++L  G + D  + T L+  Y+KCG  +D  ++F  +   +D+++W  MI G  +
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVN-RDLIAWNTMIGGLAE 305

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSV 415
            G  + A   + QM REGV PN  TY I+L A    +      ++H+ + K  +     V
Sbjct: 306 GGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGV 365

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
             AL++ Y + G + +A  VF+ +  KD+++W+AM+ G A+ G    A+ +Y+++   GV
Sbjct: 366 QNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGV 425

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
           +PN  T++S++NAC++P AA+E G++ H   ++A L     V + LV MYS  G+++ A 
Sbjct: 426 EPNRVTYTSILNACSSP-AALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDAR 484

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           +VF R  +RD+V++N+MI GYA H   K+AL++F  ++ + L+ D +T+I ++ AC ++G
Sbjct: 485 QVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSG 544

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            ++  ++    +V +   +      + +V  Y++ G    A  +  +M
Sbjct: 545 SLEWARE-IHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM 591



 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 153/489 (31%), Positives = 267/489 (54%), Gaps = 9/489 (1%)

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           D  +++   +Q +G + NS  +  +L    +   +    QVH  +I++         NAL
Sbjct: 5   DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64

Query: 221 ISMYLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           I+MY++   + +AR V+  +   +R   +WN+MV GY+      +A +    M   G   
Sbjct: 65  INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            R+T +S +  C +   L   R++H Q ++ G+ FD  +   ++  Y+KCG +E+A ++F
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPAVS 396
             M E K VVSWT  I G+   G  + A   F +M +EGV PN  TY  +L A   PA  
Sbjct: 185 DKM-EKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243

Query: 397 PF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
            +   VH+ I+   +E   +VGTAL+  Y K G   +  +VFE +  +D++AW+ M+ G 
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 303

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ G  E A ++Y Q+  EGV PN+ T+  ++NAC   SAA+  GK+ H+   KA   + 
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACV-NSAALHWGKEIHSRVAKAGFTSD 362

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + V +AL++MYS+ G+I+ A  VF +  ++D++SW +MI G A+ G   +AL V++EM++
Sbjct: 363 IGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQ 422

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +E + +T+  ++ AC+    ++ G++    +V E  +       + +V++YS  G ++
Sbjct: 423 AGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGSVK 481

Query: 635 KAMDIINRM 643
            A  + +RM
Sbjct: 482 DARQVFDRM 490



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 297/583 (50%), Gaps = 11/583 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+  +++ V +   +  Y      + A  +F  + + G+     T  SVL      
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +G+ VH   + +G   D  V T+LV +Y +  + +D R+VF+ +   ++++W +++
Sbjct: 241 AALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMI 300

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A     +   E++++MQ EG+ PN  T+  +L    +   +    ++H+ V K G  
Sbjct: 301 GGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NALISMY +   ++DAR VFD M  +D I+W +M+ G   +    EA   +  M
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEM 420

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             AG E  R T+ S++  C++   L   R++H QV++ G+  D ++   L+  YS CG +
Sbjct: 421 QQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSV 480

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA ++F  M + +D+V++ AMI G+  +     A+  F ++  EG++P+  TY  +L A
Sbjct: 481 KDARQVFDRMIQ-RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNA 539

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
                      ++H  + K  +    SVG AL++ Y K G   +A+ VFE + ++++++W
Sbjct: 540 CANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISW 599

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +A++ G AQ G  + A++++ ++  EGVKP+  TF S+++AC+  +  +E+G+++  CS+
Sbjct: 600 NAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACS-HAGLLEEGRRYF-CSM 657

Query: 508 KAKLNNALCVS--SALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKK 564
                    +     +V +  + G ++ A  + K    + +   W +++     HG+   
Sbjct: 658 SQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPV 717

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           A    +   + DL+ + + ++ +      AG+ D   +   +M
Sbjct: 718 AERAAESSLKLDLD-NAVVYVALSHMYAAAGMWDSAAKLRKLM 759



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 180/348 (51%), Gaps = 2/348 (0%)

Query: 21  SLRSPFYSKKDQSL-FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           S+ S   S KD  L FD+  +++ + +  ++    +     EAL ++  +++ G+     
Sbjct: 371 SMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRV 430

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T +S+L  C       +GR++H + V++G A D +V  +LV++Y    +V+D R+VFD M
Sbjct: 431 TYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + ++V++ +++ GYA + +    L+LF R+Q EG+KP+  T+  +L   A+ G +  A 
Sbjct: 491 IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAR 550

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           ++HT+V K G    TSV NAL+S Y K     DA  VF+ M  R+ I+WN+++ G   + 
Sbjct: 551 EIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHG 610

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A + F  M + G +    TFVS++  C+    L   R+    + ++          
Sbjct: 611 RGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHY 670

Query: 320 GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           G MV    + G++++A  +   M    +   W A++     +G + +A
Sbjct: 671 GCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVA 718


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 312/817 (38%), Positives = 493/817 (60%), Gaps = 20/817 (2%)

Query: 40   QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
            +R    +N ++  Y +    +EAL L   +++ GL L  +T   +L +C        GR+
Sbjct: 206  ERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGRE 265

Query: 100  VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
            +H E +K+    DVNV+  ++++Y +  ++ + R VFD M   +VVSWT ++ GYA    
Sbjct: 266  IHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGH 325

Query: 160  NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
            ++   E+F +MQ EG+ PN  T+  VL   +    +     VH+ ++  G E   +V  A
Sbjct: 326  SEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTA 385

Query: 220  LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
            L+ MY K    +D R VF+ + +RD I WN+M+ G        EA E ++ M   G    
Sbjct: 386  LVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPN 445

Query: 280  RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
            + T+V ++  C     L   R++HS+V+K+G  FD +++  L+  Y++CG ++DA  +F+
Sbjct: 446  KITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFN 505

Query: 340  MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPAVSP 397
             M   KD++SWTAMI G  ++G    A+  F  M + G++PN  TY+ IL A   PA   
Sbjct: 506  KMVR-KDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALD 564

Query: 398  F--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
            +  ++H  +I+        V   L+N Y   G + +A +VF+ + ++DIVA++AM+ GYA
Sbjct: 565  WGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYA 624

Query: 456  QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
                 + A+K++ +L  EG+KP++ T+ +++NAC A S ++E  K+ H+  +K    +  
Sbjct: 625  AHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC-ANSGSLEWAKEIHSLVLKDGYLSDT 683

Query: 516  CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
             + +ALV+ Y+K G+   A  VF +  KR+++SWN++I G AQHG  +  L++F+ M+ +
Sbjct: 684  SLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKME 743

Query: 576  DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
             ++ D +TF+ +++AC+HAGL++EG++YF  M  +  I PT+EHY CMVDL  RAG L++
Sbjct: 744  GIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDE 803

Query: 636  AMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAA 681
               +I  MPF A+  +W  +L ACR+              + L P ++A+YV LS+MYAA
Sbjct: 804  VEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAA 863

Query: 682  TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
             G W   A++RKLM  R V KE G SWIEV +K + F+A D SHP+S +IY++L++L+  
Sbjct: 864  AGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHA 923

Query: 742  LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
            +K  GY PDT  V+ D+D+  KE  +  HSERLAIA+GL++T  G P++I KNLRVC DC
Sbjct: 924  MKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDC 983

Query: 802  HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            HT  K I+K+  R+IV RD NRFHHFK+G+CSCGDYW
Sbjct: 984  HTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 167/584 (28%), Positives = 315/584 (53%), Gaps = 14/584 (2%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN--E 141
           +LK C  + D V GR+VH   ++     D     +L+++Y++  ++E+ R+V++ +N  E
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTE 206

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
             V SW +++ GY +    +  L+L   MQ  G+     T   +L        +    ++
Sbjct: 207 RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +K       +V N +++MY K   + +AR VFD ME +  ++W  ++ GY      
Sbjct: 267 HVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHS 326

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
             AFE F  M   G    R T+++V+   +    L+  + +HS +L  G + D  + T L
Sbjct: 327 EIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTAL 386

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+KCG  +D  ++F  +   +D+++W  MI G  + G  + A   + QM REG+ PN
Sbjct: 387 VKMYAKCGSYKDCRQVFEKLVN-RDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPN 445

Query: 382 GFTYSIILTAQPAVSPF------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
             TY I+L A   V+P       ++H+ ++K  +    SV  AL++ Y + G + +A  +
Sbjct: 446 KITYVILLNA--CVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLL 503

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  +  KDI++W+AM+ G A+ G    A+ +++ +   G+KPN  T++S++NAC++P AA
Sbjct: 504 FNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSP-AA 562

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++ G++ H   I+A L     V++ LV MYS  G+++ A +VF R  +RD+V++N+MI G
Sbjct: 563 LDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGG 622

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           YA H   K+AL++F  ++ + L+ D +T+I ++ AC ++G ++  ++   +++ + ++  
Sbjct: 623 YAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSD 682

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           T    + +V  Y++ G    A+ + ++M    +   W  ++  C
Sbjct: 683 T-SLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGC 724



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/494 (30%), Positives = 274/494 (55%), Gaps = 19/494 (3%)

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           DR +++   +Q +G + NS  +  +L    +   +    +VH  +I++   +     NAL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 221 ISMYLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           I+MY++   + +AR V++ +   +R   +WN+MV GYV      EA +    M   G  L
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            R+T + ++  C +   L   R++H + +K  + FD N+   ++  Y+KCG + +A ++F
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPAVS 396
             M E K VVSWT +I G+   G  ++A   F +M +EGV PN  TY  +L A   PA  
Sbjct: 303 DKM-ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361

Query: 397 PF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
            +   VH+HI+   +E   +VGTAL+  Y K G   +  +VFE +  +D++AW+ M+ G 
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ G+ E A +IY Q+  EG+ PN+ T+  ++NAC  P+ A+  G++ H+  +K      
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPT-ALHWGREIHSRVVKDGFMFD 480

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + V +AL++MY++ G+I+ A  +F +  ++D++SW +MI G A+ G   +AL VF++M++
Sbjct: 481 ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQ 540

Query: 575 QDLEFDGITFIGVITACTHAGLVDEG----QQYFDI-MVNEHHIYPTMEHYSCMVDLYSR 629
             L+ + +T+  ++ AC+    +D G    QQ  +  +  + H+  T      +V++YS 
Sbjct: 541 AGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANT------LVNMYSM 594

Query: 630 AGMLEKAMDIINRM 643
            G ++ A  + +RM
Sbjct: 595 CGSVKDARQVFDRM 608



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 182/342 (53%), Gaps = 7/342 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LF++  +++ + +  ++    +  L  EAL +F  +++ GL     T +S+L  C
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNAC 557

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                  +GR++H + +++G A D +V+ +LV++Y    +V+D R+VFD M + ++V++ 
Sbjct: 558 SSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYN 617

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ GYA + +    L+LF R+Q EG+KP+  T+  +L   A+ G +  A ++H++V+K+
Sbjct: 618 AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD 677

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    TS+ NAL+S Y K     DA  VFD M  R+ I+WN+++ G   +    +  + F
Sbjct: 678 GYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLF 737

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GI--DFDHNIRTGLMV-A 324
             M + G +    TFVS++  C+    L   R+    + ++ GI    +H    G MV  
Sbjct: 738 ERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEH---YGCMVDL 794

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
             + G++++   +   M    +   W A++     +G + +A
Sbjct: 795 LGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVA 836


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 336/853 (39%), Positives = 505/853 (59%), Gaps = 29/853 (3%)

Query: 5   PALKS-LINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEAL 63
           P++++ LIN  +K      R+  Y++K   L D S + + V ++ L+  Y ++ L   AL
Sbjct: 91  PSIRNHLINLYSK-----CRNFGYARK---LVDESSEPDLVSWSALISGYAQNGLGGGAL 142

Query: 64  NLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY 123
             F  +  LG+     T SSVLK C  + D   G+QVH   V SGF  DV V+ +LV +Y
Sbjct: 143 MAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMY 202

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
            + +   D +R+FD++ E NVVSW +L S Y +       + LF+ M + GIKPN F+ S
Sbjct: 203 AKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLS 262

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
           +++         +    +H  +IK G +      NAL+ MY K   + DA +VF+ ++  
Sbjct: 263 SMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQP 322

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D ++WN+++AG V +E H +A E    M  +G      T  S +K CA      L RQLH
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLH 382

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           S ++K  ++ D  +  GL+  YSKC  +EDA   F+++ E KD+++W A+ISG+ Q    
Sbjct: 383 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE-KDLIAWNAIISGYSQYWED 441

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTAL 419
             A++ F +M +EG+  N  T S IL +   +       QVH   +K+ +     V  +L
Sbjct: 442 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL 501

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           +++Y K   +++A ++FE     D+V++++M+  YAQ G  E A+K++ ++    +KP+ 
Sbjct: 502 IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 561

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           F  SS++NAC A  +A EQGKQ H   +K      +   ++LV MY+K G+I+ A   F 
Sbjct: 562 FVCSSLLNAC-ANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 620

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
              +R +VSW++MI G AQHGH ++AL++F +M ++ +  + IT + V+ AC HAGLV E
Sbjct: 621 ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTE 680

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
            + YF+ M       P  EHY+CM+DL  RAG + +A++++N+MPF A+A+VW  +L A 
Sbjct: 681 AKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAA 740

Query: 660 R--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           R              L  L+P  S  +VLL+N+YA+ G W+  A VR+LM D KVKKE G
Sbjct: 741 RIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPG 800

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            SWIEVK+K Y+FL GD SH +S +IY+KL+ELS  +  AGY P     L D++   KE 
Sbjct: 801 MSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKEL 860

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
           +L  HSE+LA+AFGL+ATP GAP+++ KNLRVC DCHT  K I K+  R+I+VRD NRFH
Sbjct: 861 LLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFH 920

Query: 826 HFKEGLCSCGDYW 838
           HFK+G CSCGDYW
Sbjct: 921 HFKDGSCSCGDYW 933



 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 162/544 (29%), Positives = 300/544 (55%), Gaps = 7/544 (1%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H    KSG + D ++   L++LY +  N    R++ D+ +E ++VSW++L+SGYA+
Sbjct: 75  GLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQ 134

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N +    L  FH M + G+K N FTFS+VL   +    +    QVH +V+ +G E    V
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N L+ MY K     D++ +FD + +R+ ++WN++ + YV  +   EA   F  M L+G 
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGI 254

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    +  S++  C   ++    + +H  ++K G D+D      L+  Y+K G + DA  
Sbjct: 255 KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  +++  D+VSW A+I+G + +   + A+    QM R G+ PN FT S  L A   + 
Sbjct: 315 VFEKIKQ-PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMG 373

Query: 397 ----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q+H+ ++K + E    V   L++ Y K  +L++A   F L+ EKD++AW+A+++
Sbjct: 374 LKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 433

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GY+Q  +   A+ ++ ++  EG+  N+ T S+++ + TA    V   +Q H  S+K+  +
Sbjct: 434 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS-TAGLQVVHVCRQVHGLSVKSGFH 492

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           + + V ++L+  Y K  ++E A  +F+     DLVS+ SMI  YAQ+G  ++AL++F EM
Sbjct: 493 SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEM 552

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           +  +L+ D      ++ AC +    ++G+Q   + + ++     +   + +V++Y++ G 
Sbjct: 553 QDMELKPDRFVCSSLLNACANLSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGS 611

Query: 633 LEKA 636
           ++ A
Sbjct: 612 IDDA 615



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 165/576 (28%), Positives = 278/576 (48%), Gaps = 54/576 (9%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P S ++S +L        +   +Q+H  + K+G     S+ N LI++Y K +    AR +
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
            D   + D ++W+++++GY  N L   A   F+ M L G +    TF SV+K C+  K+L
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           R+ +Q+H  V+ +G + D  +   L+V Y+KC +  D+ ++F  + E ++VVSW A+ S 
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE-RNVVSWNALFSC 232

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKS 412
           ++Q      AV  F +M   G++PN F+ S ++ A   +        +H ++IK  Y+  
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                AL++ Y K G L +A  VFE I + DIV+W+A++AG       E A+++  Q+  
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
            G+ PN FT SS + AC A     E G+Q H+  +K  + + L VS  LV MYSK   +E
Sbjct: 353 SGICPNIFTLSSALKAC-AGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 411

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF-------- 584
            A   F    ++DL++WN++I GY+Q+    +AL +F EM ++ + F+  T         
Sbjct: 412 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 471

Query: 585 -IGVITACTHA-GLVDEGQQYFDIMVNEHHI--YPTMEH------------------YSC 622
            + V+  C    GL  +   + DI V    I  Y    H                  ++ 
Sbjct: 472 GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTS 531

Query: 623 MVDLYSRAGMLEKAMDI---INRMPFAASATVWRTVLAACRLISL--QPHDSAIYVL--- 674
           M+  Y++ G  E+A+ +   +  M       V  ++L AC  +S   Q     +++L   
Sbjct: 532 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 591

Query: 675 ----------LSNMYAATGHWQERARVRKLMNDRKV 700
                     L NMYA  G   +  R    + +R +
Sbjct: 592 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 627


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 304/825 (36%), Positives = 500/825 (60%), Gaps = 21/825 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P ++   +N LL  Y +   ++EA  L   + + G+     T   +L  C   
Sbjct: 159 KQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADA 218

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G ++    + +G+  D+ V T+L++++++   V+D  +VF+++   ++++WTS++
Sbjct: 219 KNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMI 278

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G AR++   +   LF  M+ EG++P+   F ++L        +    +VH  + + G +
Sbjct: 279 TGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLD 338

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  AL+SMY K   + DA  VF+ ++ R+ ++W +M+AG+  +    EAF  FN M
Sbjct: 339 TEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKM 398

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G E  R TF+S++  C+    L+  RQ+H +++K G   D  +RT L+  Y+KCG +
Sbjct: 399 IESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSL 458

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA  +F  + + ++VV+W AMI+ ++Q+   D AV  F  + +EG++P+  T++ IL  
Sbjct: 459 MDARNVFERISK-QNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNV 517

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +    +    V + II+  +E    +  AL++ +V  G L  A  +F  + E+D+V+W
Sbjct: 518 CKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSW 577

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + ++AG+ Q G+ + A   ++ +   GVKP++ TF+ ++NAC +P A  E G++ HA   
Sbjct: 578 NTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTE-GRRLHALIT 636

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +A L+  + V + L++MY+K G+I+ A  VF    K+++ SW SMI GYAQHG  K+ALE
Sbjct: 637 EAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALE 696

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F +M+++ ++ D ITF+G ++AC HAGL+ EG  +F+ M  + +I P MEHY CMVDL+
Sbjct: 697 LFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLF 755

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYV 673
            RAG+L +A++ IN+M     + +W  +L AC++              + L P+D  +YV
Sbjct: 756 GRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYV 815

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           +LSN+YAA G W+E  ++RK+M DR V K+ G SWIEV  + + F + D +HPQ  +I++
Sbjct: 816 ILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHA 875

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           +L  L   +K  GY PDT YVL D++D  KE  L  HSERLAIA+GL+ TP   P+ I K
Sbjct: 876 ELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISK 935

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVCGDCHT  KLISK+ +R I+ RD+NRFHHFK+G+CSCGD+W
Sbjct: 936 NLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 188/588 (31%), Positives = 324/588 (55%), Gaps = 7/588 (1%)

Query: 61  EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLV 120
           EA+ + L +    + +   T SS+L+ C    +   G ++H     S    D+ +   L+
Sbjct: 87  EAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLI 146

Query: 121 DLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
            +Y +  N    +++FD+M + +V SW  LL GY +++  +    L  +M  +G+KP+ +
Sbjct: 147 SMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKY 206

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TF  +L   AD   V    ++ ++++  G +    V  ALI+M++K   V DA  VF+ +
Sbjct: 207 TFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNL 266

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             RD ITW SM+ G   +    +A   F  M   G +  +  FVS++K C   + L   +
Sbjct: 267 PRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGK 326

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H+++ + G+D +  + T L+  Y+KCG MEDA ++F++++  ++VVSWTAMI+G  Q+
Sbjct: 327 RVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKG-RNVVSWTAMIAGFAQH 385

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG 416
           G ++ A  FF +M   G+ PN  T+  IL A    S      Q+H  IIK  Y     V 
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           TALL+ Y K G L +A  VFE I ++++VAW+AM+  Y Q    + AV  ++ L  EG+K
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+  TF+S++N C +P  A+E GK   +  I+A   + L + +ALV+M+   G++ SA  
Sbjct: 506 PDSSTFTSILNVCKSPD-ALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMN 564

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F    +RDLVSWN++I G+ QHG  + A + FK M+   ++ D ITF G++ AC     
Sbjct: 565 LFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEA 624

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + EG++    ++ E  +   +   + ++ +Y++ G ++ A  + + +P
Sbjct: 625 LTEGRR-LHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP 671


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 332/830 (40%), Positives = 487/830 (58%), Gaps = 23/830 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   L D S + + V ++ LL  Y ++   +EAL +F  +  LG+     T  SVLK
Sbjct: 34  YARK---LVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLK 90

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C    D   GR+VH   V +GF  D  V+ +LV +Y +   ++D RR+F  + E NVVS
Sbjct: 91  ACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVS 150

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +L S Y ++++    + LF  M   GI PN F+ S +L   A         ++H +++
Sbjct: 151 WNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLML 210

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G ++     NAL+ MY K+  +  A AVF  +   D ++WN+++AG V ++ +  A  
Sbjct: 211 KMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALM 270

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
             + M  +G      T  S +K CA      L RQLHS ++K     D     GL+  YS
Sbjct: 271 LLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYS 330

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC  M+DA + +  M + KD+++W A+ISG+ Q G    AV+ F +M  E +  N  T S
Sbjct: 331 KCEMMDDARRAYDSMPK-KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLS 389

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L +  ++       Q+H   IK+     F V  +LL+ Y K   +DEA+K+FE    +
Sbjct: 390 TVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE 449

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+VA+++M+  Y+Q GD E A+K+Y Q+    +KP+ F  SS++NAC A  +A EQGKQ 
Sbjct: 450 DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNAC-ANLSAYEQGKQL 508

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H  +IK      +  S++LV MY+K G+IE A   F     R +VSW++MI GYAQHGH 
Sbjct: 509 HVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHG 568

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           K+AL +F +M R  +  + IT + V+ AC HAGLV+EG+QYF+ M     I PT EHY+C
Sbjct: 569 KEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYAC 628

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           M+DL  R+G L +A++++N +PF A   VW  +L A R              L  L+P  
Sbjct: 629 MIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEK 688

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           S  +VLL+N+YA+ G W+  A+VRK M D KVKKE G SWIE+K+K Y+F+ GD SH +S
Sbjct: 689 SGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRS 748

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
           ++IY+KL++L   L  AGY       + ++D   KE +L  HSE+LA+AFGL+ATP G P
Sbjct: 749 DEIYAKLDQLGDLLSKAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGP 808

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +++ KNLR+C DCHT  K + K+  R+I+VRD NRFHHFK+G CSCGDYW
Sbjct: 809 IRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 173/557 (31%), Positives = 306/557 (54%), Gaps = 21/557 (3%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H   +K GF+RD ++   LV LY +       R++ D+ +E +VVSW+SLLSGY +N 
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
             +  L +F+ M + G+K N FTF +VL   + +  +    +VH M +  G E    V N
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            L+ MY K  ++ D+R +F G+ +R+ ++WN++ + YV +EL  EA   F  M  +G   
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              +   ++  CA  +E  L R++H  +LK G+D D      L+  YSK G++E A  +F
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-- 396
             +    DVVSW A+I+G + +   DLA+    +M   G RPN FT S  L A  A+   
Sbjct: 242 QDIAH-PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 397 --PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+H+ +IK +          L++ Y K  ++D+A + ++ + +KDI+AW+A+++GY
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +Q GD   AV ++ ++ SE +  N+ T S+V+ +  A   A++  KQ H  SIK+ + + 
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKS-VASLQAIKVCKQIHTISIKSGIYSD 419

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V ++L+  Y K  +I+ AS++F+ +   DLV++ SMI  Y+Q+G  ++AL+++ +M+ 
Sbjct: 420 FYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQD 479

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-------MVDLY 627
            D++ D      ++ AC +    ++G+Q         H++     + C       +V++Y
Sbjct: 480 ADIKPDPFICSSLLNACANLSAYEQGKQL--------HVHAIKFGFMCDIFASNSLVNMY 531

Query: 628 SRAGMLEKAMDIINRMP 644
           ++ G +E A    + +P
Sbjct: 532 AKCGSIEDADRAFSEIP 548



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 255/509 (50%), Gaps = 28/509 (5%)

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +++H  +IK G     S+ N L+++Y K +    AR + D   + D ++W+S+++GYV N
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               EA   FN M L G +    TF SV+K C+  ++L + R++H   +  G + D  + 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+V Y+KCG ++D+ ++F  + E ++VVSW A+ S ++Q+     AV  F +M R G+
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVE-RNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179

Query: 379 RPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            PN F+ SIIL A    Q      ++H  ++K   +       AL++ Y K G ++ A  
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VF+ I   D+V+W+A++AG       + A+ +  ++   G +PN FT SS + AC A   
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
             E G+Q H+  IK   ++ L  +  LV MYSK   ++ A   +    K+D+++WN++I 
Sbjct: 300 K-ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY+Q G    A+ +F +M  +D++F+  T   V+ +      +   +Q   I + +  IY
Sbjct: 359 GYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISI-KSGIY 417

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVL 674
                 + ++D Y +   +++A  I            W  ++A   +I+           
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIFEE-------RTWEDLVAYTSMIT----------- 459

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKE 703
               Y+  G  +E  ++   M D  +K +
Sbjct: 460 ---AYSQYGDGEEALKLYLQMQDADIKPD 485


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 331/837 (39%), Positives = 476/837 (56%), Gaps = 29/837 (3%)

Query: 26  FYSKKDQS-----LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK  +      +FD  P    V ++ L+  Y  + L + A+  F G+R  G+      
Sbjct: 46  FYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFA 105

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM- 139
           L  VLK   C+ D   G QVH   + +GF  DV V+ +LV +Y     ++D RRVFD+  
Sbjct: 106 LPVVLK---CVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAG 162

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +E N VSW  L+S Y +N      +++F  M   GI+P  F FS V+        +    
Sbjct: 163 SERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGR 222

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH MV++ G E      NAL+ MY+K   V  A  +F+ M D D ++WN++++G V N 
Sbjct: 223 QVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 282

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
               A E    M  +G         S++K CA      L RQ+H  ++K   D D  I  
Sbjct: 283 HDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGV 342

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           GL+  Y+K   ++DA K+F  M   +D++ W A+ISG    G  D A + F  + +EG+ 
Sbjct: 343 GLVDMYAKNHFLDDAMKVFDWMSH-RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLG 401

Query: 380 PNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N  T + +L +    + A +  QVHA   K  +     V   L+++Y K   L +A +V
Sbjct: 402 VNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRV 461

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE     DI+A ++M+   +Q    EGA+K++ ++  +G++P+ F  SS++NAC + SA 
Sbjct: 462 FEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA- 520

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            EQGKQ HA  IK +  +     +ALV  Y+K G+IE A   F    +R +VSW++MI G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            AQHGH K+ALE+F  M  + +  + IT   V+ AC HAGLVDE ++YF+ M     I  
Sbjct: 581 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR 640

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
           T EHYSCM+DL  RAG L+ AM+++N MPF A+A+VW  +L A R              L
Sbjct: 641 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKL 700

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L+P  S  +VLL+N YA++G W E A+VRKLM D  +KKE   SW+EVK+K ++F+ G
Sbjct: 701 FILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVG 760

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP + +IYSKL+EL   +  AGY P+    L D+D   KE +LS HSERLA+AF L+
Sbjct: 761 DKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALL 820

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +TP GAP+++ KNLR+C DCH   K IS +  R+I++RD NRFHHF++G CSCGDYW
Sbjct: 821 STPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 166/553 (30%), Positives = 275/553 (49%), Gaps = 13/553 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  +H   +KSGF    ++   L+  Y +       RRVFD++ +   VSW+SL++ Y+ 
Sbjct: 23  GAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N +    ++ FH M+ EG+  N F    VL  + D  + A   QVH M +  G      V
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGA---QVHAMAMATGFGSDVFV 137

Query: 217 CNALISMYLKSKMVRDARAVFD-GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
            NAL++MY     + DAR VFD    +R++++WN +++ YV N+   +A + F  M  +G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            + T   F  V+  C  ++ +   RQ+H+ V++ G + D      L+  Y K G+++ AS
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            IF  M +  DVVSW A+ISG + NG    A+    QM   G+ PN F  S IL A    
Sbjct: 258 VIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGA 316

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             F    Q+H  +IK N +    +G  L++ Y K   LD+A KVF+ +  +D++ W+A++
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALI 376

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +G +  G  + A  I+  L  EG+  N  T ++V+ + TA   A    +Q HA + K   
Sbjct: 377 SGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS-TASLEAASATRQVHALAEKIGF 435

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                V + L+  Y K   +  A  VF+     D+++  SMI   +Q  H + A+++F E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFME 495

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M R+ LE D      ++ AC      ++G+Q    ++    +       + +V  Y++ G
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCG 554

Query: 632 MLEKAMDIINRMP 644
            +E A    + +P
Sbjct: 555 SIEDAELAFSSLP 567


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 299/773 (38%), Positives = 472/773 (61%), Gaps = 20/773 (2%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +L++C    D   G+QVH   ++ G   +V +  +L+ LY+   +V + RR+FD  +  +
Sbjct: 50  LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKS 109

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VVSW  ++SGYA   +      LF  MQ EG++P+ FTF ++L   +    +    +VH 
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            V++ G     +V NALISMY K   VRDAR VFD M  RD ++W ++   Y  +    E
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           + +T++ M   G   +R T+++V+  C +   L   +Q+H+Q++++    D  + T L  
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y KCG ++DA ++F  +   +DV++W  MI G + +G ++ A   F +M +E V P+  
Sbjct: 290 MYIKCGAVKDAREVFECLPN-RDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRV 348

Query: 384 TYSIILTA--QPA--VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           TY  IL+A  +P       ++HA  +K         G AL+N Y K G + +A +VF+ +
Sbjct: 349 TYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 408

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
            ++D+V+W+A++ GYA  G    +   ++++  +GV+ N+ T+  V+ AC+ P  A++ G
Sbjct: 409 PKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNP-VALKWG 467

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K+ HA  +KA +   L V++AL++MY K G++E A  V +    RD+V+WN++I G AQ+
Sbjct: 468 KEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQN 527

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G   +AL+ F+ M+ +++  +  TF+ V++AC    LV+EG++ F  M  ++ I PT +H
Sbjct: 528 GRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKH 587

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y+CMVD+ +RAG L +A D+I  MPF  SA +W  +LAACR               + L+
Sbjct: 588 YACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLE 647

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P ++  YV LS +YAA G W++ A++RKLM +R VKKE G SWIEV  + +SF+AGD SH
Sbjct: 648 PQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSH 707

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P++ +IYS+LE L+ ++K  GY PDT +V+ D+D E KE  +  HSE+LAIA+GL++TP 
Sbjct: 708 PRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPP 767

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             P+++ KNLRVC DCHT  K ISK+  R+I+ RD +RFHHFK G CSCGDYW
Sbjct: 768 ETPIRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/552 (28%), Positives = 282/552 (51%), Gaps = 10/552 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+   ++ V +N ++  Y    L QEA NLF  +++ GL     T  S+L  C     
Sbjct: 101 LFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAA 160

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             +GR+VH   +++G A +  V  +L+ +Y +  +V D RRVFD M   + VSWT+L   
Sbjct: 161 LNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA 220

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA +      L+ +H M  EG++P+  T+  VL        +    Q+H  ++++     
Sbjct: 221 YAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSD 280

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL  MY+K   V+DAR VF+ + +RD I WN+M+ G V +    EA   F+ M  
Sbjct: 281 VRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLK 340

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                 R T+++++  CA    L   +++H++ +K+G+  D      L+  YSK G M+D
Sbjct: 341 ECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKD 400

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A ++F  M + +DVVSWTA++ G+   G +  + + F +M ++GV  N  TY  +L A  
Sbjct: 401 ARQVFDRMPK-RDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACS 459

Query: 392 QPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            P    +  ++HA ++K       +V  AL++ Y K G +++A +V E +  +D+V W+ 
Sbjct: 460 NPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNT 519

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++ G AQ G    A++ +  + SE ++PN  TF +V++AC   +   E  +QF +     
Sbjct: 520 LIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDY 579

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEV-FKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            +       + +V + ++ G++  A +V      K     W +++     HG+    +E+
Sbjct: 580 GIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGN----VEI 635

Query: 569 FKEMRRQDLEFD 580
            ++   Q L+ +
Sbjct: 636 GEQAAEQCLKLE 647



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 270/500 (54%), Gaps = 11/500 (2%)

Query: 163 VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS 222
           VL+  H+   +G + +S+ +  +L        +A   QVH  +++ G +    + N L+ 
Sbjct: 31  VLQYLHQ---KGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLK 87

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
           +Y+    V +AR +FD   ++  ++WN M++GY    L  EAF  F  M   G E  + T
Sbjct: 88  LYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFT 147

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           FVS++  C++   L   R++H +V++ G+  +  +   L+  Y+KCG + DA ++F  M 
Sbjct: 148 FVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMA 207

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
             +D VSWT +   + ++G    ++  +  M +EGVRP+  TY  +L+A  +++      
Sbjct: 208 S-RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGK 266

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+HA I+++ +     V TAL   Y+K G + +A +VFE +  +D++AW+ M+ G    G
Sbjct: 267 QIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSG 326

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             E A  ++ ++  E V P+  T+ ++++AC  P   +  GK+ HA ++K  L + +   
Sbjct: 327 QLEEAHGMFHRMLKECVAPDRVTYLAILSACARP-GGLACGKEIHARAVKDGLVSDVRFG 385

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +AL+ MYSK G+++ A +VF R  KRD+VSW +++ GYA  G   ++   FK+M +Q +E
Sbjct: 386 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVE 445

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            + IT++ V+ AC++   +  G++    +V    I+  +   + ++ +Y + G +E A+ 
Sbjct: 446 ANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GIFADLAVANALMSMYFKCGSVEDAIR 504

Query: 639 IINRMPFAASATVWRTVLAA 658
           +   M        W T++  
Sbjct: 505 VSEGMS-TRDVVTWNTLIGG 523



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 5/170 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FDR P+R+ V +  L+  Y       E+ + F  + + G+     T   VLK C
Sbjct: 399 KDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKAC 458

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                  +G+++H E VK+G   D+ V+ +L+ +Y +  +VED  RV + M+  +VV+W 
Sbjct: 459 SNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWN 518

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV-----LADEG 193
           +L+ G A+N      L+ F  M+ E ++PN+ TF  V+       L +EG
Sbjct: 519 TLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEG 568


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 327/837 (39%), Positives = 478/837 (57%), Gaps = 29/837 (3%)

Query: 26  FYSKKDQS-----LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK  +      +FD  P    V ++ L+  Y  + L + A+  F G+R  G+      
Sbjct: 46  FYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFA 105

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L  VLK   C+ D   G QVH   + +GF  DV V+ +LV +Y     ++D RRVF++ +
Sbjct: 106 LPVVLK---CVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEAD 162

Query: 141 -ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E N VSW  L+S Y +N      +++F  M   GI+P  F FS V+        +    
Sbjct: 163 SERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGR 222

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH MV++ G +      NAL+ MY+K   V  A  +F+ M D D ++WN++++G V N 
Sbjct: 223 QVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 282

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
               A E    M  +G      T  S++K C+      L RQ+H  ++K   D D  I  
Sbjct: 283 HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGV 342

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           GL+  Y+K   ++DA K+F  M   +D++   A+ISG    G  D A++ F ++ +EG+ 
Sbjct: 343 GLVDMYAKNHFLDDARKVFDWMFH-RDLILCNALISGCSHGGRHDEALSLFYELRKEGLG 401

Query: 380 PNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N  T + +L +    + A +  QVHA  +K  +     V   L+++Y K   L +A +V
Sbjct: 402 VNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRV 461

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE     DI+A ++M+   +Q    EGA+K++ ++  +G++P+ F  SS++NAC + SA 
Sbjct: 462 FEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA- 520

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            EQGKQ HA  IK +  +     +ALV  Y+K G+IE A   F    +R +VSW++MI G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            AQHGH K+ALE+F  M  + +  + IT   V+ AC HAGLVDE ++YF+ M     I  
Sbjct: 581 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR 640

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
           T EHYSCM+DL  RAG L+ AM+++N MPF A+A++W  +L A R              L
Sbjct: 641 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKL 700

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L+P  S  +VLL+N YA+ G W E A+VRKLM D  +KKE   SWIEVK+K ++F+ G
Sbjct: 701 FILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVG 760

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP + +IY+KL EL   +  AG+ P+    L D+D   KE +LS HSERLA+AF L+
Sbjct: 761 DKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALL 820

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +TP GAP+++ KNLR+C DCH   K ISK+  R+I++RD NRFHHF++G CSCGDYW
Sbjct: 821 STPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 278/553 (50%), Gaps = 13/553 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  +H   +KSG     +    L+  Y +       RRVFD++ +   VSW+SL++ Y+ 
Sbjct: 23  GAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N +    ++ FH M+ EG+  N F    VL  + D  + A   QVH M +  G      V
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGA---QVHAMAMATGFGSDVFV 137

Query: 217 CNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
            NAL++MY     + DAR VF+  + +R++++WN +++ YV N+   +A + F  M  +G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            + T   F  V+  C  ++ +   RQ+H+ V++ G D D      L+  Y K G+++ AS
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            IF  M +  DVVSW A+ISG + NG    A+    QM   G+ PN FT S IL A    
Sbjct: 258 VIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             F    Q+H  +IK N +    +G  L++ Y K   LD+A KVF+ +  +D++  +A++
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +G +  G  + A+ ++ +L  EG+  N  T ++V+ + TA   A    +Q HA ++K   
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS-TASLEAASTTRQVHALAVKIGF 435

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                V + L+  Y K   +  A+ VF+     D+++  SMI   +Q  H + A+++F E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M R+ LE D      ++ AC      ++G+Q    ++    +       + +V  Y++ G
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCG 554

Query: 632 MLEKAMDIINRMP 644
            +E A    + +P
Sbjct: 555 SIEDAELAFSSLP 567


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 327/837 (39%), Positives = 477/837 (56%), Gaps = 29/837 (3%)

Query: 26  FYSKKDQS-----LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK  +       FD  P    V ++ L+  Y  + L + A+  F G+R  G+      
Sbjct: 46  FYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFA 105

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L  VLK   C+ D   G QVH   + +GF  DV V+ +LV +Y     ++D RRVF++ +
Sbjct: 106 LPVVLK---CVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEAD 162

Query: 141 -ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E N VSW  L+S Y +N      +++F  M   GI+P  F FS V+        +    
Sbjct: 163 SERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGR 222

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH MV++ G +      NAL+ MY+K   V  A  +F+ M D D ++WN++++G V N 
Sbjct: 223 QVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 282

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
               A E    M  +G      T  S++K C+      L RQ+H  ++K   D D  I  
Sbjct: 283 HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGV 342

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           GL+  Y+K   ++DA K+F  M   +D++   A+ISG    G  D A++ F ++ +EG+ 
Sbjct: 343 GLVDMYAKNHFLDDARKVFDWMFH-RDLILCNALISGCSHGGRHDEALSLFYELRKEGLG 401

Query: 380 PNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N  T + +L +    + A +  QVHA  +K  +     V   L+++Y K   L +A +V
Sbjct: 402 VNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRV 461

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE     DI+A ++M+   +Q    EGA+K++ ++  +G++P+ F  SS++NAC + SA 
Sbjct: 462 FEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA- 520

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            EQGKQ HA  IK +  +     +ALV  Y+K G+IE A   F    +R +VSW++MI G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            AQHGH K+ALE+F  M  + +  + IT   V+ AC HAGLVDE ++YF+ M     I  
Sbjct: 581 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR 640

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
           T EHYSCM+DL  RAG L+ AM+++N MPF A+A++W  +L A R              L
Sbjct: 641 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKL 700

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L+P  S  +VLL+N YA+ G W E A+VRKLM D  +KKE   SWIEVK+K ++F+ G
Sbjct: 701 FILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVG 760

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP + +IY+KL EL   +  AG+ P+    L D+D   KE +LS HSERLA+AF L+
Sbjct: 761 DKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALL 820

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +TP GAP+++ KNLR+C DCH   K ISK+  R+I++RD NRFHHF++G CSCGDYW
Sbjct: 821 STPPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 163/553 (29%), Positives = 277/553 (50%), Gaps = 13/553 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  +H   +KSG     +    L+  Y +       RR FD++ +   VSW+SL++ Y+ 
Sbjct: 23  GAHLHASLLKSGSL--ASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N +    ++ FH M+ EG+  N F    VL  + D  + A   QVH M +  G      V
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGA---QVHAMAMATGFGSDVFV 137

Query: 217 CNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
            NAL++MY     + DAR VF+  + +R++++WN +++ YV N+   +A + F  M  +G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            + T   F  V+  C  ++ +   RQ+H+ V++ G D D      L+  Y K G+++ AS
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            IF  M +  DVVSW A+ISG + NG    A+    QM   G+ PN FT S IL A    
Sbjct: 258 VIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGA 316

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             F    Q+H  +IK N +    +G  L++ Y K   LD+A KVF+ +  +D++  +A++
Sbjct: 317 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALI 376

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +G +  G  + A+ ++ +L  EG+  N  T ++V+ + TA   A    +Q HA ++K   
Sbjct: 377 SGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS-TASLEAASTTRQVHALAVKIGF 435

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                V + L+  Y K   +  A+ VF+     D+++  SMI   +Q  H + A+++F E
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFME 495

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M R+ LE D      ++ AC      ++G+Q    ++    +       + +V  Y++ G
Sbjct: 496 MLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCG 554

Query: 632 MLEKAMDIINRMP 644
            +E A    + +P
Sbjct: 555 SIEDAELAFSSLP 567


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 300/824 (36%), Positives = 489/824 (59%), Gaps = 21/824 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F   P+R+ + +N L+  Y +    ++A  LF  ++  G      T  S+L  C    +
Sbjct: 84  VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+++H + +K+G+ RD  V  SL+ +Y +  ++   R+VF  ++  +VVS+ ++L  
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+       L LF +M  EGI P+  T+  +L       ++    ++H + ++ G    
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL++M ++   V  A+  F G+ DRD + +N+++A    +  ++EAFE +  M  
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRS 323

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G  L R+T++S++  C+T+K L   + +HS + ++G   D  I   L+  Y++CG +  
Sbjct: 324 DGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPK 383

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M + +D++SW A+I+G+ +      A+  + QM  EGV+P   T+  +L+A  
Sbjct: 384 ARELFYTMPK-RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             S +     +H  I+++  + +  +  AL+N Y + G L EA  VFE    +D+++W++
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+AG+AQ G  E A K+++++ +E ++P+  TF+SV++ C  P A +E GKQ H    ++
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEA-LELGKQIHGRITES 561

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L   + + +AL+ MY + G+++ A  VF   + RD++SW +MI G A  G   KA+E+F
Sbjct: 562 GLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELF 621

Query: 570 KEMRRQDLEF-DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
            +M+ +     DG TF  +++AC HAGLV EG Q F  M +E+ + PT+EHY C+V L  
Sbjct: 622 WQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLG 681

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL---ISLQPH-----------DSAIYVL 674
           RA   ++A  +IN+MPF   A VW T+L ACR+   I+L  H           + A+Y+L
Sbjct: 682 RARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYIL 741

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YAA G W + A++R++M  R ++KE G SWIEV N  + F+A D SHP++ +IY++
Sbjct: 742 LSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAE 801

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L+ LS  +++AGY PDT +VL D+   H+E  L  HSERLAIA+GL+ TP G P++I KN
Sbjct: 802 LKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKN 861

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR+CGDCHT  K ISKL  R+I+ RD+NRFH FK G CSC DYW
Sbjct: 862 LRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 164/566 (28%), Positives = 309/566 (54%), Gaps = 8/566 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++H + V++G   D+ +S  L+++Y++  +V D  +VF +M   +V+SW SL+S YA+ 
Sbjct: 47  KRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQ 106

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
               +  +LF  MQ  G  PN  T+ ++L        +    ++H+ +IK G +    V 
Sbjct: 107 GFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQ 166

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+L+SMY K   +  AR VF G+  RD +++N+M+  Y       E    F  M   G  
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             + T+++++    T   L   +++H   ++ G++ D  + T L+    +CG ++ A + 
Sbjct: 227 PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQA 286

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  + + +DVV + A+I+   Q+G    A   + +M  +GV  N  TY  IL A      
Sbjct: 287 FKGIAD-RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKA 345

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            +    +H+HI +  +     +G AL++ Y + G L +A ++F  + ++D+++W+A++AG
Sbjct: 346 LEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAG 405

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           YA+  D   A+++Y+Q+ SEGVKP   TF  +++AC A S+A   GK  H   +++ + +
Sbjct: 406 YARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC-ANSSAYADGKMIHEDILRSGIKS 464

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
              +++AL+ MY + G++  A  VF+  + RD++SWNSMI G+AQHG  + A ++F+EM+
Sbjct: 465 NGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQ 524

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
            ++LE D ITF  V++ C +   ++ G+Q     + E  +   +   + ++++Y R G L
Sbjct: 525 NEELEPDNITFASVLSGCKNPEALELGKQIHG-RITESGLQLDVNLGNALINMYIRCGSL 583

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC 659
           + A ++ + +        W  ++  C
Sbjct: 584 QDARNVFHSLQH-RDVMSWTAMIGGC 608



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 261/482 (54%), Gaps = 8/482 (1%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           T+  +L     + ++  A ++H  +++ G      + N LI+MY+K + V DA  VF  M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             RD I+WNS+++ Y       +AF+ F  M  AG    + T++S++  C +  EL   +
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++HSQ++K G   D  ++  L+  Y KCG +  A ++F+ +   +DVVS+  M+  + Q 
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISP-RDVVSYNTMLGLYAQK 207

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG 416
             +   +  F QM+ EG+ P+  TY  +L A    S      ++H   ++        VG
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           TAL+   V+ G +D A + F+ I ++D+V ++A++A  AQ G    A + Y ++ S+GV 
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
            N  T+ S++NAC+  S A+E GK  H+   +   ++ + + +AL++MY++ G++  A E
Sbjct: 328 LNRTTYLSILNACST-SKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F    KRDL+SWN++I GYA+     +A+ ++K+M+ + ++   +TF+ +++AC ++  
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
             +G+   + ++    I       + ++++Y R G L +A ++      A     W +++
Sbjct: 447 YADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ-ARDVISWNSMI 504

Query: 657 AA 658
           A 
Sbjct: 505 AG 506



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 217/388 (55%), Gaps = 12/388 (3%)

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  R+T+V++++ C   + L  A+++H+Q+++ G+  D  +   L+  Y KC  + DA +
Sbjct: 24  ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M   +DV+SW ++IS + Q G    A   F +M   G  PN  TY  ILTA    S
Sbjct: 84  VFKEMPR-RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTA--CYS 140

Query: 397 PFQ------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           P +      +H+ IIK  Y++   V  +LL+ Y K G L  A +VF  I  +D+V+++ M
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           L  YAQ    +  + ++ Q++SEG+ P++ T+ ++++A T PS  +++GK+ H  +++  
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS-MLDEGKRIHKLTVEEG 259

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           LN+ + V +ALVTM  + G+++SA + FK    RD+V +N++I   AQHGH  +A E + 
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYY 319

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            MR   +  +  T++ ++ AC+ +  ++ G+     +  + H    ++  + ++ +Y+R 
Sbjct: 320 RMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH-SSDVQIGNALISMYARC 378

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAA 658
           G L KA ++   MP       W  ++A 
Sbjct: 379 GDLPKARELFYTMP-KRDLISWNAIIAG 405



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 167/339 (49%), Gaps = 2/339 (0%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + LF   P+R+ + +N ++  Y R     EA+ L+  ++  G+     T   +L  C 
Sbjct: 383 KARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
               +  G+ +H + ++SG   + +++ +L+++Y R  ++ + + VF+     +V+SW S
Sbjct: 443 NSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNS 502

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G+A++   +   +LF  MQ E ++P++ TF++VL    +   +    Q+H  + ++G
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            ++  ++ NALI+MY++   ++DAR VF  ++ RD ++W +M+ G       M+A E F 
Sbjct: 563 LQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFW 622

Query: 270 NMGLAGAELTR-STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA-YSK 327
            M   G      STF S++  C     +    Q+ S +             G +V    +
Sbjct: 623 QMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGR 682

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
             + ++A  + + M    D   W  ++     +G I LA
Sbjct: 683 ARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALA 721


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 314/823 (38%), Positives = 478/823 (58%), Gaps = 20/823 (2%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            +F   P+R+ V +  L+  +  +     A+NLF  +RR G+     T ++ LK C    D
Sbjct: 185  VFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLD 244

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              FG+QVH E +K G   D+ V ++LVDLY +   +    RVF  M + N VSW +LL+G
Sbjct: 245  LEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNG 304

Query: 154  YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            +A+    ++VL LF RM    I  + FT STVL   A+ G +     VH++ I+ G E+ 
Sbjct: 305  FAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELD 364

Query: 214  TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
              +   L+ MY K  +  DA  VF  +ED D ++W++++          EA E F  M  
Sbjct: 365  EFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRH 424

Query: 274  AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            +G    + T  S++       +L     +H+ V K G ++D+ +   L+  Y K G ++D
Sbjct: 425  SGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQD 484

Query: 334  ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
              ++F      +D++SW A++SG   N   D  +  F QM  EG  PN +T+  IL +  
Sbjct: 485  GCRVFEATTN-RDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCS 543

Query: 394  AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++S      QVHA I+K + + +  VGTAL++ Y K   L++A  +F  + ++D+ AW+ 
Sbjct: 544  SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTV 603

Query: 450  MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            ++AGYAQ G  E AVK + Q+  EGVKPNEFT +S ++ C+   A ++ G+Q H+ +IKA
Sbjct: 604  IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRI-ATLDSGRQLHSMAIKA 662

Query: 510  KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              +  + V+SALV MY+K G +E A  VF     RD VSWN++ICGY+QHG   KAL+ F
Sbjct: 663  GQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAF 722

Query: 570  KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            + M  +    D +TFIGV++AC+H GL++EG+++F+ +   + I PT+EHY+CMVD+  R
Sbjct: 723  EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 782

Query: 630  AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
            AG   +    I  M   ++  +W TVL AC+              L  L+P   + Y+LL
Sbjct: 783  AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILL 842

Query: 676  SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
            SNM+AA G W +   VR LM+ R VKKE G SW+EV  + + FL+ D SHP+  +I+ KL
Sbjct: 843  SNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKL 902

Query: 736  EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
            ++L  +L   GY P+T +VL ++ D  K+ +L  HSERLA+AF L++T     ++I KNL
Sbjct: 903  QDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNL 962

Query: 796  RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R+CGDCH  +K IS++  +++VVRD N FHHFK G CSC ++W
Sbjct: 963  RICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 175/581 (30%), Positives = 306/581 (52%), Gaps = 8/581 (1%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           S +L+TC    D   G+ +H + +KSG   D ++  SLV++Y +  +     +VF ++ E
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            +VVSWT+L++G+         + LF  M+ EG++ N FT++T L   +    +    QV
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   IK G      V +AL+ +Y K   +  A  VF  M  +++++WN+++ G+      
Sbjct: 252 HAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +    F  M  +    ++ T  +V+K CA +  LR  + +HS  ++ G + D  I   L
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCL 371

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  YSKCG   DA K+F  + E  DVVSW+A+I+   Q G    A   F +M   GV PN
Sbjct: 372 VDMYSKCGLAGDALKVFVRI-EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430

Query: 382 GFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            FT + +++A   +        +HA + K  +E   +V  AL+  Y+K G + +  +VFE
Sbjct: 431 QFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFE 490

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
               +D+++W+A+L+G+      +  ++I+ Q+ +EG  PN +TF S++ +C++ S  V+
Sbjct: 491 ATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLS-DVD 549

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            GKQ HA  +K  L+    V +ALV MY+K   +E A  +F R  KRDL +W  ++ GYA
Sbjct: 550 LGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYA 609

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           Q G  +KA++ F +M+R+ ++ +  T    ++ C+    +D G+Q   + +        M
Sbjct: 610 QDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ-SGDM 668

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
              S +VD+Y++ G +E A  + + +  +     W T++  
Sbjct: 669 FVASALVDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICG 708



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 241/466 (51%), Gaps = 7/466 (1%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +S +L   A +G +     +H  VIK+G    + + N+L+++Y K      A  VF  + 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           +RD ++W +++ G+V       A   F  M   G E    T+ + +K C+   +L   +Q
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H++ +K G   D  + + L+  Y+KCG+M  A ++F  M + ++ VSW A+++G  Q G
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPK-QNAVSWNALLNGFAQMG 309

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGT 417
             +  +N FC+MT   +  + FT S +L         +    VH+  I+   E    +  
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
            L++ Y K G+  +A KVF  I++ D+V+WSA++    Q G +  A ++++++   GV P
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           N+FT +S+++A T     +  G+  HAC  K        V +ALVTMY K G+++    V
Sbjct: 430 NQFTLASLVSAAT-DLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           F+    RDL+SWN+++ G+  +      L +F +M  +    +  TFI ++ +C+    V
Sbjct: 489 FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 548

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           D G+Q    +V ++ +       + +VD+Y++   LE A  I NR+
Sbjct: 549 DLGKQVHAQIV-KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 593



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 91/164 (55%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F+R  +R+   +  ++  Y +D   ++A+  F+ ++R G+     TL+S L  C  +
Sbjct: 587 ETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRI 646

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQ+H   +K+G + D+ V+++LVD+Y +   VED   VFD +   + VSW +++
Sbjct: 647 ATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTII 706

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            GY+++    + L+ F  M  EG  P+  TF  VL   +  G++
Sbjct: 707 CGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLI 750


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 329/853 (38%), Positives = 495/853 (58%), Gaps = 56/853 (6%)

Query: 5   PALKS-LINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEAL 63
           P++++ LIN  +K      R   Y++K   L D S + + V ++ L+  Y ++ L   AL
Sbjct: 91  PSIRNHLINLYSK-----CRXFGYARK---LVDESSEPDLVSWSALISGYAQNGLGGGAL 142

Query: 64  NLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY 123
             F  +  LG+     T SSVLK C  + D   G+QVH   V SGF  DV V+ +LV +Y
Sbjct: 143 MAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMY 202

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
            + +   D +R+FD++ E NVVSW +L S Y +       + LF+ M + GIKPN F+ S
Sbjct: 203 AKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLS 262

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
           +++         +    +H  +IK G +      NAL+ MY K   + DA +VF+ ++  
Sbjct: 263 SMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQP 322

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D ++WN+++AG V +E H +A E    M                            RQLH
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQM---------------------------KRQLH 355

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           S ++K  ++ D  +  GL+  YSKC  +EDA   F+++ E KD+++W A+ISG+ Q    
Sbjct: 356 SSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPE-KDLIAWNAIISGYSQYWED 414

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTAL 419
             A++ F +M +EG+  N  T S IL +   +       QVH   +K+ +     V  +L
Sbjct: 415 MEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSL 474

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           +++Y K   +++A ++FE     D+V++++M+  YAQ G  E A+K++ ++    +KP+ 
Sbjct: 475 IDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDR 534

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           F  SS++NAC A  +A EQGKQ H   +K      +   ++LV MY+K G+I+ A   F 
Sbjct: 535 FVCSSLLNAC-ANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 593

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
              +R +VSW++MI G AQHGH ++AL++F +M ++ +  + IT + V+ AC HAGLV E
Sbjct: 594 ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTE 653

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
            + YF+ M       P  EHY+CM+DL  RAG + +A++++N+MPF A+A+VW  +L A 
Sbjct: 654 AKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAA 713

Query: 660 R--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           R              L  L+P  S  +VLL+N+YA+ G W+  A VR+LM D KVKKE G
Sbjct: 714 RIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPG 773

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            SWIEVK+K Y+FL GD SH +S +IY+KL+ELS  +  AGY P     L D++   KE 
Sbjct: 774 MSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKEL 833

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
           +L  HSE+LA+AFGL+ATP GAP+++ KNLRVC DCHT  K I K+  R+I+VRD NRFH
Sbjct: 834 LLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFH 893

Query: 826 HFKEGLCSCGDYW 838
           HFK+G CSCGDYW
Sbjct: 894 HFKDGSCSCGDYW 906



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 153/540 (28%), Positives = 289/540 (53%), Gaps = 26/540 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H    KSG + D ++   L++LY +       R++ D+ +E ++VSW++L+SGYA+
Sbjct: 75  GLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQ 134

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N +    L  FH M + G+K N FTFS+VL   +    +    QVH +V+ +G E    V
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N L+ MY K     D++ +FD + +R+ ++WN++ + YV  +   EA   F  M L+G 
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGI 254

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    +  S++  C   ++    + +H  ++K G D+D      L+  Y+K G + DA  
Sbjct: 255 KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  +++  D+VSW A+I+G + +   + A+    QM R                     
Sbjct: 315 VFEKIKQ-PDIVSWNAVIAGCVLHEHHEQALELLGQMKR--------------------- 352

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             Q+H+ ++K + E    V   L++ Y K  +L++A   F L+ EKD++AW+A+++GY+Q
Sbjct: 353 --QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ 410

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
             +   A+ ++ ++  EG+  N+ T S+++ + TA    V   +Q H  S+K+  ++ + 
Sbjct: 411 YWEDMEALSLFVEMHKEGIGFNQTTLSTILKS-TAGLQVVHVCRQVHGLSVKSGFHSDIY 469

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V ++L+  Y K  ++E A  +F+     DLVS+ SMI  YAQ+G  ++AL++F EM+  +
Sbjct: 470 VVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDME 529

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           L+ D      ++ AC +    ++G+Q   + + ++     +   + +V++Y++ G ++ A
Sbjct: 530 LKPDRFVCSSLLNACANLSAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 264/576 (45%), Gaps = 81/576 (14%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P S ++S +L        +   +Q+H  + K+G     S+ N LI++Y K +    AR +
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
            D   + D ++W+++++GY  N L   A   F+ M L G +    TF SV+K C+  K+L
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           R+ +Q+H  V+ +G + D  +   L+V Y+KC +  D+ ++F  + E ++VVSW A+ S 
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPE-RNVVSWNALFSC 232

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKS 412
           ++Q      AV  F +M   G++PN F+ S ++ A   +        +H ++IK  Y+  
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                AL++ Y K G L +A  VFE I + DIV+W+A++AG       E A+++  Q+  
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK- 351

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
                                      +Q H+  +K  + + L VS  LV MYSK   +E
Sbjct: 352 ---------------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 384

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF-------- 584
            A   F    ++DL++WN++I GY+Q+    +AL +F EM ++ + F+  T         
Sbjct: 385 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 444

Query: 585 -IGVITACTHA-GLVDEGQQYFDIMVNEHHI--YPTMEH------------------YSC 622
            + V+  C    GL  +   + DI V    I  Y    H                  ++ 
Sbjct: 445 GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTS 504

Query: 623 MVDLYSRAGMLEKAMDI---INRMPFAASATVWRTVLAACRLISL--QPHDSAIYVL--- 674
           M+  Y++ G  E+A+ +   +  M       V  ++L AC  +S   Q     +++L   
Sbjct: 505 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 564

Query: 675 ----------LSNMYAATGHWQERARVRKLMNDRKV 700
                     L NMYA  G   +  R    + +R +
Sbjct: 565 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 600


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 292/773 (37%), Positives = 467/773 (60%), Gaps = 20/773 (2%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +L++C    D   G+QVH   ++ G   +V ++ +L+ LY    +V + R++FD  +  +
Sbjct: 34  LLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKS 93

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VVSW  ++SGYA   +      LF  MQ E ++P+ FTF ++L   +   ++    ++H 
Sbjct: 94  VVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHV 153

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            V++ G    T+V NALISMY K   VRDAR VFD M  RD ++W ++   Y  +    E
Sbjct: 154 RVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEE 213

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           + +T++ M       +R T+++V+  C +   L   +Q+H+ ++++    D  + T L  
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTK 273

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y KCG  +DA ++F  +   +DV++W  MI G + +G ++ A   F +M  EGV P+  
Sbjct: 274 MYMKCGAFKDAREVFECL-SYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRA 332

Query: 384 TYSIILTA--QPA--VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           TY+ +L+A  +P       ++HA   K         G AL+N Y K G + +A +VF+ +
Sbjct: 333 TYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRM 392

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
            ++D+V+W+ +L  YA       +   ++Q+  +GVK N+ T+  V+ AC+ P  A++ G
Sbjct: 393 PKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNP-VALKWG 451

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K+ HA  +KA L   L V++AL++MY K G++E A  VF+    RD+V+WN++I G  Q+
Sbjct: 452 KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQN 511

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G   +AL+ ++ M+ + +  +  TF+ V++AC    LV+EG++ F  M  ++ I PT +H
Sbjct: 512 GRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKH 571

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQ 665
           Y+CMVD+ +RAG L +A D+I  +P   SA +W  +LAACR+              + L+
Sbjct: 572 YACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLE 631

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P ++ +YV LS +YAA G W++ A++RK M +R VKKE G SWIE+  + +SF+A D SH
Sbjct: 632 PQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSH 691

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P++ +IY++LE L  ++K  GY PDT +V+ D+DDE KE  +  HSE+LAIA+GL++TP 
Sbjct: 692 PRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPP 751

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G P++I KNLRVC DCHT  K ISK+ +R+I+ RD +RFHHFK G CSCGDYW
Sbjct: 752 GTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 153/511 (29%), Positives = 263/511 (51%), Gaps = 5/511 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD+   ++ V +N ++  Y    L QEA NLF  +++  L     T  S+L  C   
Sbjct: 83  RQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSP 142

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +GR++H   +++G A D  V  +L+ +Y +  +V D RRVFD M   + VSWT+L 
Sbjct: 143 AVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLT 202

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             YA +   +  L+ +H M  E ++P+  T+  VL        +    Q+H  ++++   
Sbjct: 203 GAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH 262

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  AL  MY+K    +DAR VF+ +  RD I WN+M+ G+V +    EA  TF+ M
Sbjct: 263 SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRM 322

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G    R+T+ +V+  CA    L   +++H++  K+G+  D      L+  YSK G M
Sbjct: 323 LEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSM 382

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA ++F  M + +DVVSWT ++  +     +  +   F QM ++GV+ N  TY  +L A
Sbjct: 383 KDARQVFDRMPK-RDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKA 441

Query: 392 --QPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              P    +  ++HA ++K       +V  AL++ Y K G +++A +VFE +  +D+V W
Sbjct: 442 CSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTW 501

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + ++ G  Q G    A++ Y  + SEG++PN  TF +V++AC   +   E  +QF   S 
Sbjct: 502 NTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSK 561

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVF 538
              +       + +V + ++ G++  A +V 
Sbjct: 562 DYGIVPTEKHYACMVDILARAGHLREAEDVI 592



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 268/500 (53%), Gaps = 11/500 (2%)

Query: 163 VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS 222
           VL+  HR   +G + +S+ +  +L        +A   QVH  +++ G +    + N L+ 
Sbjct: 15  VLQYLHR---KGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLK 71

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
           +Y     V +AR +FD   ++  ++WN M++GY    L  EAF  F  M     E  + T
Sbjct: 72  LYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFT 131

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           FVS++  C++   L   R++H +V++ G+  D  +   L+  Y+KCG + DA ++F  M 
Sbjct: 132 FVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA 191

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
             +D VSWT +   + ++G  + ++  +  M +E VRP+  TY  +L+A  +++      
Sbjct: 192 S-RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGK 250

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+HAHI+++ Y     V TAL   Y+K G   +A +VFE +  +D++AW+ M+ G+   G
Sbjct: 251 QIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSG 310

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             E A   + ++  EGV P+  T+++V++AC  P   + +GK+ HA + K  L + +   
Sbjct: 311 QLEEAHGTFHRMLEEGVAPDRATYTTVLSACARP-GGLARGKEIHARAAKDGLVSDVRFG 369

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +AL+ MYSK G+++ A +VF R  KRD+VSW +++  YA      ++   FK+M +Q ++
Sbjct: 370 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVK 429

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            + IT++ V+ AC++   +  G++    +V    +   +   + ++ +Y + G +E A+ 
Sbjct: 430 ANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCGSVEDAIR 488

Query: 639 IINRMPFAASATVWRTVLAA 658
           +   M      T W T++  
Sbjct: 489 VFEGMSMRDVVT-WNTLIGG 507



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 2/228 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FDR P+R+ V +  LL  Y       E+   F  + + G+     T   VLK C
Sbjct: 383 KDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKAC 442

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                  +G+++H E VK+G   D+ V+ +L+ +Y +  +VED  RVF+ M+  +VV+W 
Sbjct: 443 SNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWN 502

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +L+ G  +N      L+ +  M+ EG++PN+ TF  VL       +V    +    + K+
Sbjct: 503 TLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKD 562

Query: 209 GGEVVTSVCNA-LISMYLKSKMVRDARAVFDGMEDRDSIT-WNSMVAG 254
            G V T    A ++ +  ++  +R+A  V   +  + S   W +++A 
Sbjct: 563 YGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAA 610


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 311/817 (38%), Positives = 498/817 (60%), Gaps = 28/817 (3%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           NRL+ +     LH     L L  ++   P   +T S +LK+C    +   G+ VH + ++
Sbjct: 14  NRLIRQLDVGRLHHAFSTLDLMTQQNAPPDL-TTYSILLKSCIRFRNFQLGKLVHRKLMQ 72

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVSWTSLLSGYARNKMNDRVLE 165
           SG   D  V  +L+ LY +  + E  R +F+ M N+ ++VSW++++S +A N M  + + 
Sbjct: 73  SGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIW 132

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMY 224
            F  M   G  PN + F+ V+   ++         ++  V+K G  E    V   LI M+
Sbjct: 133 TFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMF 192

Query: 225 LK-SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           +K S  +  A  VFD M +R+ +TW  M+  +       +A + F +M L+G    R T+
Sbjct: 193 VKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTY 252

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC---GKMEDASKIFSM 340
            SV+  C     L L +QLHS+V++ G+  D  +   L+  Y+KC   G ++D+ K+F  
Sbjct: 253 SSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQ 312

Query: 341 MREMKDVVSWTAMISGHLQNGAIDL-AVNFFCQMTREGVRPNGFTYSIILTAQPAVS-PF 398
           M E  +V+SWTA+I+ ++Q+G  D  A+  FC+M    +RPN F++S +L A   +S P+
Sbjct: 313 MPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 371

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              QV+++ +K        VG +L++ Y + G +++A K F+++ EK++V+++A++ GYA
Sbjct: 372 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 431

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           +   +E A  ++ ++   G+  + FTF+S+++   A   A+ +G+Q H   +K    +  
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSG-AASIGAMGKGEQIHGRLLKGGYKSNQ 490

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
           C+ +AL++MYS+ GNIE+A +VF     R+++SW SMI G+A+HG   +ALE+F +M   
Sbjct: 491 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 550

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
             + + IT++ V++AC+H G++ EGQ++F+ M  EH I P MEHY+CMVDL  R+G+L +
Sbjct: 551 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 610

Query: 636 AMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAA 681
           AM+ IN MP  A A VWRT+L ACR              ++  +P D A Y+LLSN++A+
Sbjct: 611 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 670

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
            G W++  ++RK M +R + KEAG SWIEV+N+ + F  G+ SHPQ+ QIY +L++L+++
Sbjct: 671 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 730

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +K+ GY PDT +VL DI++E KE  L QHSE++A+AFGL++T    P++I KNLRVCGDC
Sbjct: 731 IKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDC 790

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           HT IK IS    R+IVVRD+NRFHH K G+CSC DYW
Sbjct: 791 HTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/441 (31%), Positives = 233/441 (52%), Gaps = 17/441 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+ P+RN V +  ++  + +    ++A++LFL +   G      T SSVL  C  L  
Sbjct: 205 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 264

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT---NNVEDGRRVFDDMNESNVVSWTSL 150
              G+Q+H   ++ G A DV V  SLVD+Y +     +V+D R+VF+ M E NV+SWT++
Sbjct: 265 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 324

Query: 151 LSGYARNKMNDR-VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ Y ++   D+  +ELF +M    I+PN F+FS+VL    +     T  QV++  +K G
Sbjct: 325 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 384

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
              V  V N+LISMY +S  + DAR  FD + +++ +++N++V GY  N    EAF  FN
Sbjct: 385 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 444

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G  ++  TF S++   A+   +    Q+H ++LK G   +  I   L+  YS+CG
Sbjct: 445 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 504

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A ++F+ M E ++V+SWT+MI+G  ++G    A+  F +M   G +PN  TY  +L
Sbjct: 505 NIEAAFQVFNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 563

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVG-----TALLNAYVKKGILDEAAKVFELIDE--- 441
           +A   V           + Y++   V        +++   + G+L EA    E I+    
Sbjct: 564 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA---MEFINSMPL 620

Query: 442 -KDIVAWSAMLAGYAQIGDTE 461
             D + W  +L      G+TE
Sbjct: 621 MADALVWRTLLGACRVHGNTE 641


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 303/785 (38%), Positives = 486/785 (61%), Gaps = 27/785 (3%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           +T S +LK+C    +   G+ VH + ++SG   D  V  +L+ LY +  + E  R +F+ 
Sbjct: 27  TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 86

Query: 139 M-NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
           M N+ ++VSW++++S +A N M  + +  F  M   G  PN + F+ V+   ++      
Sbjct: 87  MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 146

Query: 198 AVQVHTMVIKNGG-EVVTSVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGY 255
              ++  V+K G  E    V   LI M++K S  +  A  VFD M +R+ +TW  M+  +
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                  +A + F +M L+G    R T+ SV+  C     L L +QLHS+V++ G+  D 
Sbjct: 207 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 266

Query: 316 NIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNFFC 371
            +   L+  Y+KC   G ++D+ K+F  M E  +V+SWTA+I+ ++Q+G  D  A+  FC
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFC 325

Query: 372 QMTREGVRPNGFTYSIILTAQPAVS-PF---QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           +M    +RPN F++S +L A   +S P+   QV+++ +K        VG +L++ Y + G
Sbjct: 326 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 385

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +++A K F+++ EK++V+++A++ GYA+   +E A  ++ ++   G+  + FTF+S+++
Sbjct: 386 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 445

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
              A   A+ +G+Q H   +K    +  C+ +AL++MYS+ GNIE+A +VF     R+++
Sbjct: 446 G-AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVI 504

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SW SMI G+A+HG   +ALE+F +M     + + IT++ V++AC+H G++ EGQ++F+ M
Sbjct: 505 SWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSM 564

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------- 660
             EH I P MEHY+CMVDL  R+G+L +AM+ IN MP  A A VWRT+L ACR       
Sbjct: 565 YKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTEL 624

Query: 661 -------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKN 713
                  ++  +P D A Y+LLSN++A+ G W++  ++RK M +R + KEAG SWIEV+N
Sbjct: 625 GRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVEN 684

Query: 714 KTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSER 773
           + + F  G+ SHPQ+ QIY +L++L++++K+ GY PDT +VL DI++E KE  L QHSE+
Sbjct: 685 RVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEK 744

Query: 774 LAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCS 833
           +A+AFGL++T    P++I KNLRVCGDCHT IK IS    R+IVVRD+NRFHH K G+CS
Sbjct: 745 IAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCS 804

Query: 834 CGDYW 838
           C DYW
Sbjct: 805 CNDYW 809



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 233/441 (52%), Gaps = 17/441 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+ P+RN V +  ++  + +    ++A++LFL +   G      T SSVL  C  L  
Sbjct: 187 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 246

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT---NNVEDGRRVFDDMNESNVVSWTSL 150
              G+Q+H   ++ G A DV V  SLVD+Y +     +V+D R+VF+ M E NV+SWT++
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306

Query: 151 LSGYARNKMNDR-VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ Y ++   D+  +ELF +M    I+PN F+FS+VL    +     T  QV++  +K G
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 366

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
              V  V N+LISMY +S  + DAR  FD + +++ +++N++V GY  N    EAF  FN
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 426

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G  ++  TF S++   A+   +    Q+H ++LK G   +  I   L+  YS+CG
Sbjct: 427 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 486

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A ++F+ M + ++V+SWT+MI+G  ++G    A+  F +M   G +PN  TY  +L
Sbjct: 487 NIEAAFQVFNEMED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 545

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVG-----TALLNAYVKKGILDEAAKVFELIDE--- 441
           +A   V           + Y++   V        +++   + G+L EA    E I+    
Sbjct: 546 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA---MEFINSMPL 602

Query: 442 -KDIVAWSAMLAGYAQIGDTE 461
             D + W  +L      G+TE
Sbjct: 603 MADALVWRTLLGACRVHGNTE 623



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 206/394 (52%), Gaps = 23/394 (5%)

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           AF T + M    A    +T+  ++K C   +  +L + +H +++++G++ D  +   L+ 
Sbjct: 10  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            YSKCG  E A  IF  M   +D+VSW+AM+S    N     A+  F  M   G  PN +
Sbjct: 70  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129

Query: 384 TYSIIL----TAQPAVSPFQVHAHIIKTNY-EKSFSVGTALLNAYVK-KGILDEAAKVFE 437
            ++ ++     A  A     ++  ++KT Y E    VG  L++ +VK  G L  A KVF+
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            + E+++V W+ M+  +AQ+G    A+ ++  +   G  P+ FT+SSV++ACT     + 
Sbjct: 190 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT-ELGLLA 248

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSK---KGNIESASEVFKRQRKRDLVSWNSMIC 554
            GKQ H+  I+  L   +CV  +LV MY+K    G+++ + +VF++  + +++SW ++I 
Sbjct: 249 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 308

Query: 555 GYAQHGHT-KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            Y Q G   K+A+E+F +M    +  +  +F  V+ AC +      G+Q +   V     
Sbjct: 309 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK---- 364

Query: 614 YPTMEHYSC----MVDLYSRAGMLE---KAMDII 640
              +   +C    ++ +Y+R+G +E   KA DI+
Sbjct: 365 -LGIASVNCVGNSLISMYARSGRMEDARKAFDIL 397



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 151/296 (51%), Gaps = 13/296 (4%)

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           MT++   P+  TYSI+L +      FQ    VH  ++++  E    V   L++ Y K G 
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 429 LDEAAKVFE-LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            + A  +FE + +++D+V+WSAM++ +A       A+  +  +   G  PNE+ F++VI 
Sbjct: 77  TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIR 136

Query: 488 ACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSALVTMYSK-KGNIESASEVFKRQRKRD 545
           AC+  + A   G+  +   +K   L   +CV   L+ M+ K  G++ SA +VF +  +R+
Sbjct: 137 ACSNANYAW-VGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 195

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           LV+W  MI  +AQ G  + A+++F +M       D  T+  V++ACT  GL+  G+Q   
Sbjct: 196 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 255

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRA---GMLEKAMDIINRMPFAASATVWRTVLAA 658
            ++            S +VD+Y++    G ++ +  +  +MP   +   W  ++ A
Sbjct: 256 RVIRLGLALDVCVGCS-LVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 309


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 310/830 (37%), Positives = 486/830 (58%), Gaps = 20/830 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           + ++ + +F+    R+ V +  +L  Y ++ L +EA+ L+  + R G+      LSS+L 
Sbjct: 92  FVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILS 151

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        GR +H +  K GF  +  V  +L+ LY+R  +     RVF DM   + V+
Sbjct: 152 ACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVT 211

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           + +L+SG+A+    DR L +F  MQ+ G+ P+S T +++L   +  G +    Q+H+ ++
Sbjct: 212 FNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLL 271

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G  +   +  +L+ +Y+KS  + +A  +FD  +  + + WN M+  Y   +   ++F+
Sbjct: 272 KAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFD 331

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M  AG    + T+  +++ C  T E+ L  Q+HS  +KNG   D  +   L+  YS
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYS 391

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G ++ A +I  M+ E KDVVSWT+MI+G++Q+     A+  F +M   G+ P+    +
Sbjct: 392 KYGWLDKAQRILDMIEE-KDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLA 450

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             ++A   +       Q+HA +  + Y    S+   L+  Y + GI  EA   FE I+ K
Sbjct: 451 SAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHK 510

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           + + W+ +++G+AQ G  E A+K++ ++   G K N FTF S I+A +A  A ++QGKQ 
Sbjct: 511 EGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISA-SANLADIKQGKQI 569

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           HA  IK    +   +S+AL+++Y K G+IE A   F    KR+ VSWN++I   +QHG  
Sbjct: 570 HARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRG 629

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            +AL++F +M++Q L+   +TF+GV+TAC+H GLV+EG  YF  M NEH I+P  +HY+C
Sbjct: 630 LEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYAC 689

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           +VD+  RAG L++A   +  MP  A + VWRT+L+AC+              L+ L+PHD
Sbjct: 690 VVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHD 749

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           SA YVLLSN YA TG W  R ++RK+M DR V+KE G SWIEVKN  ++F  GD  HP +
Sbjct: 750 SASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLA 809

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
           +QIY+ L  L+ RL   GYK +  ++  + + E K+     HSE+LA+AFGL++ P+  P
Sbjct: 810 DQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMP 869

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+++KNLRVC DCHT +K  S +  R+IV+RD  RFHHF  G CSCGDYW
Sbjct: 870 LRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 178/626 (28%), Positives = 317/626 (50%), Gaps = 13/626 (2%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC-GCLFDHVFGRQ 99
           R    +NR L  +      ++ L LF    R  + L     +  L+ C G         +
Sbjct: 4   RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPE 63

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H + +  G +    +   L+DLY +   V   RRVF++++  + VSW ++LSGYA+N +
Sbjct: 64  IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
            +  + L+  M   G+ P  +  S++L       +      +H  V K G    T V NA
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LIS+YL+ +  R A  VF  M   DS+T+N++++G+        A   F+ M L+G    
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             T  S++  C+   +LR  +QLHS +LK G+  D+ +   L+  Y K G +E+A +IF 
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD 303

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL-----TAQPA 394
              +  +VV W  M+  + Q   +  + + F +M   GVRPN FTY  +L     T +  
Sbjct: 304 -SGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIG 362

Query: 395 VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           +   Q+H+  IK  ++    V   L++ Y K G LD+A ++ ++I+EKD+V+W++M+AGY
Sbjct: 363 LGE-QIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGY 421

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q    + A++ ++++ + G+ P+    +S I+AC A   AV QG Q HA    +  +  
Sbjct: 422 VQHEFCKEALETFKEMQACGIWPDNIGLASAISAC-AGIKAVHQGSQIHARVYVSGYSAD 480

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + + + LV +Y++ G  + A   F+    ++ ++WN +I G+AQ G  ++AL+VF +M +
Sbjct: 481 VSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQ 540

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
              +++  TF+  I+A  +   + +G+Q    ++   +   T E  + ++ LY + G +E
Sbjct: 541 AGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSET-EISNALISLYGKCGSIE 599

Query: 635 KA-MDIINRMPFAASATVWRTVLAAC 659
            A MD         +   W T++  C
Sbjct: 600 DAKMDFFEMTK--RNEVSWNTIITCC 623


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 323/831 (38%), Positives = 468/831 (56%), Gaps = 29/831 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD  P    V ++ L+  Y  + + ++AL  F  +R  G+P     L  VLK   C 
Sbjct: 57  RAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK---CA 113

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM----NESNVVSW 147
            D  FG QVH   V +    DV V+ +LV +Y     V++ RR+FD+      E N VSW
Sbjct: 114 PDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSW 173

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            +++S Y +N  +   + +F  M   G +PN F FS V+        +    QVH  V++
Sbjct: 174 NTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVR 233

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G E      NAL+ MY K   +  A  VF+ M   D ++WN+ ++G VT+     A E 
Sbjct: 234 TGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALEL 293

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
              M  +G      T  SV+K CA      L RQ+H  ++K   DFD  +  GL+  Y+K
Sbjct: 294 LLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAK 353

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR--PNGFTY 385
            G ++DA K+F  M   +D++ W A+ISG   +G     ++ F +M +EG+    N  T 
Sbjct: 354 HGFLDDARKVFDFMPR-RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTL 412

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +L +  +        QVHA   K        V   L+++Y K G LD A KVF+    
Sbjct: 413 ASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRS 472

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            DI++ + M+   +Q    E A+K++ Q+  +G++P+ F  SS++NACT+ SA  EQGKQ
Sbjct: 473 DDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSA-YEQGKQ 531

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            HA  IK +  + +   +ALV  Y+K G+IE A   F    +R +VSW++MI G AQHGH
Sbjct: 532 VHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGH 591

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
            K+AL++F  M  + +  + IT   V++AC HAGLVD+ ++YF+ M     I  T EHY+
Sbjct: 592 GKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYA 651

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPH 667
           CM+D+  RAG LE AM+++N MPF A+A VW  +L A R              L +L+P 
Sbjct: 652 CMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPE 711

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
            S  +VLL+N YA+ G W E A+VRKLM D  VKKE   SW+E+K+K ++F+ GD SHP 
Sbjct: 712 KSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPM 771

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
           +  IY KL EL   +  AGY P+    L D+D   KE +LS HSERLA+AF L++TP+GA
Sbjct: 772 TRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGA 831

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P+++ KNLR+C DCH   K ISK+  R+I++RD NRFHHF  G CSCGDYW
Sbjct: 832 PIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/576 (29%), Positives = 278/576 (48%), Gaps = 20/576 (3%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T+ S L   G       G  +H   +KSG       S  L+ LY R       R VFD++
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEI 63

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            +   VSW+SL++ Y+ N M    L  F  M+  G+  N F    VL    D   V    
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGA 120

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD-----GMEDRDSITWNSMVAG 254
           QVH + +         V NAL+++Y    MV +AR +FD     G E R++++WN+M++ 
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGE-RNAVSWNTMISA 179

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           YV N+   +A   F  M  +G       F  V+  C  +++L   RQ+H  V++ G + D
Sbjct: 180 YVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKD 239

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
                 L+  YSK G +E A+ +F  M    DVVSW A ISG + +G    A+    QM 
Sbjct: 240 VFTANALVDMYSKLGDIEMAATVFEKM-PAADVVSWNAFISGCVTHGHDHRALELLLQMK 298

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
             G+ PN FT S +L A      F    Q+H  ++K   +    V   L++ Y K G LD
Sbjct: 299 SSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLD 358

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG--VKPNEFTFSSVINA 488
           +A KVF+ +  +D++ W+A+++G +  G     + ++ ++  EG  +  N  T +SV+ +
Sbjct: 359 DARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKS 418

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
            TA S A+   +Q HA + K  L +   V + L+  Y K G ++ A +VFK  R  D++S
Sbjct: 419 -TASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIIS 477

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
             +M+   +Q  H + A+++F +M R+ LE D      ++ ACT     ++G+Q    ++
Sbjct: 478 STTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLI 537

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
                       + +V  Y++ G +E A    + +P
Sbjct: 538 KRQFTSDVFAG-NALVYAYAKCGSIEDADMAFSGLP 572



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 198/390 (50%), Gaps = 19/390 (4%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGI--DFDHNIRTGLMVAYSKCGKMEDASK 336
           T  T  S +    T++ L     LHS +LK+G+   F ++    L+  YS+C     A  
Sbjct: 3   TPETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGFSNH----LLTLYSRCRLPSAARA 58

Query: 337 IFSMMREMKDV--VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
           +F    E+ D   VSW+++++ +  NG    A+  F  M   GV  N F   ++L   P 
Sbjct: 59  VFD---EIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD 115

Query: 395 VS-PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE----LIDEKDIVAWSA 449
           V    QVHA  + T       V  AL+  Y   G++DEA ++F+    +  E++ V+W+ 
Sbjct: 116 VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNT 175

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M++ Y +   +  A+ ++R++   G +PNEF FS V+NACT  S  +E G+Q H   ++ 
Sbjct: 176 MISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTG-SRDLEAGRQVHGAVVRT 234

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
                +  ++ALV MYSK G+IE A+ VF++    D+VSWN+ I G   HGH  +ALE+ 
Sbjct: 235 GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELL 294

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M+   L  +  T   V+ AC  AG  + G+Q    MV     +        +VD+Y++
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAK 353

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAAC 659
            G L+ A  + + MP      +W  +++ C
Sbjct: 354 HGFLDDARKVFDFMP-RRDLILWNALISGC 382


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 308/823 (37%), Positives = 479/823 (58%), Gaps = 20/823 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+R   ++ V +  ++    ++    EA+ LF  + +  +       SSVL  C  +  
Sbjct: 169 VFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIEL 228

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H   VK G + +  V  +LV LY R  N+    ++F  M+  + +S+ SL+SG
Sbjct: 229 FKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISG 288

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            A+   +DR L+LF +MQ++ +KP+  T +++L   A  G      Q+H+ VIK G    
Sbjct: 289 LAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSD 348

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +  +L+ +Y+K   +  A   F   E  + + WN M+  Y       E++  F  M +
Sbjct: 349 LIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQI 408

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G    + T+ S+++ C +   L L  Q+H+QV+K+G  F+  + + L+  Y+K G+++ 
Sbjct: 409 EGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDT 468

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  I   +RE +DVVSWTAMI+G+ Q+     A+  F +M  +G+R +   +S  ++A  
Sbjct: 469 ARGILQRLRE-EDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACA 527

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +       Q+HA    + Y +  S+G AL++ Y + G   +A   FE ID KD ++W+A
Sbjct: 528 GIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNA 587

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +++G+AQ G  E A++++ Q+   GV+ N FTF S ++A TA +A ++QGKQ HA  IK 
Sbjct: 588 LISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSA-TANTANIKQGKQIHAMMIKT 646

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             ++    S+ L+T+YSK G+IE A   F    ++++VSWN+MI GY+QHG+  +A+ +F
Sbjct: 647 GYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLF 706

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           +EM++  L  + +TF+GV++AC+H GLV+EG  YF  M  EH + P  EHY C+VDL  R
Sbjct: 707 EEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGR 766

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLL 675
           A +L  A + I  MP    A +WRT+L+AC               L+ L+P DSA YVLL
Sbjct: 767 AALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLL 826

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SNMYA +G W  R R R++M DR VKKE G SWIEVKN  ++F  GD  HP + QIY  +
Sbjct: 827 SNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYI 886

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           ++L+ R  + GY  D   +L D++ E K+     HSE+LA+AFGL++     P++++KNL
Sbjct: 887 DDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNL 946

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           RVC DCH  IK +SK+  R IVVRD  RFHHF+ G+CSC DYW
Sbjct: 947 RVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  309 bits (792), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 185/616 (30%), Positives = 320/616 (51%), Gaps = 8/616 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC-GCLF 92
           LFD  P  N   +N+++       L  + L LF  +    +    ST +SVL+ C G   
Sbjct: 67  LFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKA 126

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
                 Q+H + +  GF     V   L+DLY +  +V+  + VF+ +   + VSW +++S
Sbjct: 127 PFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMIS 186

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G ++N   D  + LF +M    + P  + FS+VL       +     Q+H  ++K G   
Sbjct: 187 GLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSS 246

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            T VCNAL+++Y +   +  A  +F  M  RD I++NS+++G         A + F  M 
Sbjct: 247 ETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQ 306

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           L   +    T  S++  CA+       +QLHS V+K G+  D  I   L+  Y KC  +E
Sbjct: 307 LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIE 366

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A + F +  E ++VV W  M+  + Q G +  +   F QM  EG+ PN +TY  IL   
Sbjct: 367 TAHEYF-LTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTC 425

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            ++       Q+H  +IK+ ++ +  V + L++ Y K G LD A  + + + E+D+V+W+
Sbjct: 426 TSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWT 485

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM+AGY Q      A+K+++++ ++G++ +   FSS I+AC A   A+ QG+Q HA S  
Sbjct: 486 AMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISAC-AGIQALNQGQQIHAQSYI 544

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           +  +  L + +ALV++Y++ G  + A   F++   +D +SWN++I G+AQ GH ++AL+V
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQV 604

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F +M +  +E +  TF   ++A  +   + +G+Q   +M+   +   T E  + ++ LYS
Sbjct: 605 FSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSET-EASNVLITLYS 663

Query: 629 RAGMLEKAMDIINRMP 644
           + G +E A      MP
Sbjct: 664 KCGSIEDAKREFFEMP 679



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 182/625 (29%), Positives = 312/625 (49%), Gaps = 46/625 (7%)

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L D    +++H    KSGF  +  + + L+D+Y+    V++  ++FDD+  SNV  W 
Sbjct: 24  GSLLD---AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWN 80

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAVQVHTMVIK 207
            ++SG    K+  +VL LF  M  E + P+  TF++VL      +       Q+H  +I 
Sbjct: 81  KVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIH 140

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +G      VCN LI +Y K+  V  A+ VF+ +  +DS++W +M++G   N    EA   
Sbjct: 141 HGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILL 200

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  M  +    T   F SV+  C   +  +L  QLH  ++K G+  +  +   L+  YS+
Sbjct: 201 FCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSR 260

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G +  A +IFS M   +D +S+ ++ISG  Q G  D A+  F +M  + ++P+  T + 
Sbjct: 261 WGNLIAAEQIFSKMHR-RDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+A  +V       Q+H+++IK        +  +LL+ YVK   ++ A + F   + ++
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V W+ ML  Y Q+G+   +  I+ Q+  EG+ PN++T+ S++  CT+   A++ G+Q H
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSL-GALDLGEQIH 438

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
              IK+     + V S L+ MY+K G +++A  + +R R+ D+VSW +MI GY QH    
Sbjct: 439 TQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA 498

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS-- 621
           +AL++F+EM  Q +  D I F   I+AC     +++GQQ         H    +  YS  
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI--------HAQSYISGYSED 550

Query: 622 -----CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLS 676
                 +V LY+R G  + A     ++  A     W  +++                   
Sbjct: 551 LSIGNALVSLYARCGRAQDAYLAFEKID-AKDNISWNALISG------------------ 591

Query: 677 NMYAATGHWQERARVRKLMNDRKVK 701
             +A +GH +E  +V   MN   V+
Sbjct: 592 --FAQSGHCEEALQVFSQMNQAGVE 614



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 252/481 (52%), Gaps = 12/481 (2%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M+  GI+ N  T+  +     + G +  A ++H  + K+G +    + + LI +YL    
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           V +A  +FD +   +   WN +++G +  +L  +    F+ M         STF SV++ 
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 290 CATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           C+  K   ++  Q+H++++ +G      +   L+  YSK G ++ A  +F  +  +KD V
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF-LKDSV 179

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           SW AMISG  QNG  D A+  FCQM +  V P  + +S +L+A   +  F    Q+H  I
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K        V  AL+  Y + G L  A ++F  +  +D ++++++++G AQ G ++ A+
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           +++ ++  + +KP+  T +S+++AC +  A   +GKQ H+  IK  +++ L +  +L+ +
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGY-KGKQLHSYVIKMGMSSDLIIEGSLLDL 358

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K  +IE+A E F      ++V WN M+  Y Q G+  ++  +F +M+ + L  +  T+
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC--MVDLYSRAGMLEKAMDIINR 642
             ++  CT  G +D G+Q    ++     +     Y C  ++D+Y++ G L+ A  I+ R
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNV---YVCSVLIDMYAKHGELDTARGILQR 475

Query: 643 M 643
           +
Sbjct: 476 L 476



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 131/260 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +  R  + + V +  ++  Y +  L  EAL LF  +   G+       SS +  C  +
Sbjct: 470 RGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGI 529

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H +   SG++ D+++  +LV LY R    +D    F+ ++  + +SW +L+
Sbjct: 530 QALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALI 589

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG+A++   +  L++F +M   G++ N FTF + +   A+   +    Q+H M+IK G +
Sbjct: 590 SGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYD 649

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T   N LI++Y K   + DA+  F  M +++ ++WN+M+ GY  +    EA   F  M
Sbjct: 650 SETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEM 709

Query: 272 GLAGAELTRSTFVSVIKLCA 291
              G      TFV V+  C+
Sbjct: 710 KQLGLMPNHVTFVGVLSACS 729


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/843 (36%), Positives = 483/843 (57%), Gaps = 56/843 (6%)

Query: 50  LFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF 109
           ++  C+    +EA+ L   I++ GL +  +T   +++ C  L     G+ VH +  + G 
Sbjct: 50  VWRLCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGL 109

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
           A D+ +  SL++ Y +  +V    +VF  M   +VV+W+S+++ YA N    +  + F R
Sbjct: 110 AIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFER 169

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M+   I+PN  TF ++L    +  ++  A ++HT+V  +G E   +V  ALI+MY K   
Sbjct: 170 MKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGE 229

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           +  A  +F  M++R+ ++W +++     +    EAFE +  M  AG      TFVS++  
Sbjct: 230 ISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNS 289

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C T + L   R++HS + + G++ D  +   L+  Y KC  ++DA + F  M + +DV+S
Sbjct: 290 CNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSK-RDVIS 348

Query: 350 WTAMISGHLQNG-----AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
           W+AMI+G+ Q+G     ++D       +M REGV PN  T+  IL A           Q+
Sbjct: 349 WSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQI 408

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA----------- 449
           HA I K  +E   S+ TA+ N Y K G + EA +VF  ++ K++VAW++           
Sbjct: 409 HAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDL 468

Query: 450 --------------------MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
                               M+AGYAQ GD     ++   +  EG +P+  T  S++ AC
Sbjct: 469 TSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEAC 528

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
            A SA +E+GK  HA ++K  L +   V+++L+ MYSK G +  A  VF +   RD V+W
Sbjct: 529 GALSA-LERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAW 587

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           N+M+ GY QHG   +A+++FK M ++ +  + ITF  VI+AC  AGLV EG++ F IM  
Sbjct: 588 NAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE 647

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------- 660
           +  + P  +HY CMVDL  RAG L++A + I RMP     +VW  +L AC+         
Sbjct: 648 DFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAE 707

Query: 661 -----LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                ++ L+P ++++YV LSN+YA  G W +  +VRK+M+D+ +KK+ G S IE+  + 
Sbjct: 708 WAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRI 767

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLA 775
           ++F+A D +HP+ + I+++LE L+  +K+AGY PD  +VL D+D+  KE  L  HSE+LA
Sbjct: 768 HTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLA 827

Query: 776 IAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           IA+GL+ TP G P++I+KNLRVCGDCHT  K ISK+ +R+IV RD NRFH+FK G CSCG
Sbjct: 828 IAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCG 887

Query: 836 DYW 838
           D+W
Sbjct: 888 DFW 890



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 172/586 (29%), Positives = 287/586 (48%), Gaps = 47/586 (8%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK       + +F R   R+ V ++ ++  Y  ++   +A + F  ++   +     T
Sbjct: 122 FYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRIT 181

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
             S+LK C         R++H     SG   DV V+T+L+ +Y +   +     +F  M 
Sbjct: 182 FLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMK 241

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E NVVSWT+++   A+++  +   EL+ +M   GI PN+ TF ++L        +    +
Sbjct: 242 ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRR 301

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN-- 258
           +H+ + + G E    V NALI+MY K   ++DAR  FD M  RD I+W++M+AGY  +  
Sbjct: 302 IHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGY 361

Query: 259 ---ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
              E   E F+    M   G    + TF+S++K C+    L   RQ+H+++ K G + D 
Sbjct: 362 QDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDR 421

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMR----------------------------EM--K 345
           +++T +   Y+KCG + +A ++FS M                             EM  +
Sbjct: 422 SLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTR 481

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VH 401
           +VVSW  MI+G+ Q+G I         M  EG +P+  T   IL A  A+S  +    VH
Sbjct: 482 NVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVH 541

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           A  +K   E    V T+L+  Y K G + EA  VF+ I  +D VAW+AMLAGY Q G   
Sbjct: 542 AEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGP 601

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSA 520
            AV +++++  E V PNE TF++VI+AC   +  V++G++ F       ++         
Sbjct: 602 EAVDLFKRMLKERVPPNEITFTAVISAC-GRAGLVQEGREIFRIMQEDFRMKPGKQHYGC 660

Query: 521 LVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
           +V +  + G ++ A E  +R   + D+  W++++     H + + A
Sbjct: 661 MVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLA 706


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 297/751 (39%), Positives = 448/751 (59%), Gaps = 29/751 (3%)

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNES---------NVVSWTSLLSGYARNKMNDRVLE 165
           + TS V   +R N V+  R V    N++         N V W   + GY +N   ++ L 
Sbjct: 47  LPTSTVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALR 106

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L+++MQ  GI P+   F +V+     +  +    +VH  +I  G E    V  AL SMY 
Sbjct: 107 LYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYT 166

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   + +AR VFD M  RD ++WN+++AGY  N    EA   F+ M + G +   ST VS
Sbjct: 167 KCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVS 226

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+ +CA    L   +Q+H   +++GI+ D  +  GL+  Y+KCG +  A K+F  M  ++
Sbjct: 227 VMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERM-PIR 285

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVH 401
           DV SW A+I G+  N     A+ FF +M   G++PN  T   +L A   +       Q+H
Sbjct: 286 DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIH 345

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
            + I++ +E +  VG AL+N Y K G ++ A K+FE + +K++VAW+A+++GY+Q G   
Sbjct: 346 GYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPH 405

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+ ++ ++ ++G+KP+ F   SV+ AC A   A+EQGKQ H  +I++   + + V + L
Sbjct: 406 EALALFIEMQAQGIKPDSFAIVSVLPAC-AHFLALEQGKQIHGYTIRSGFESNVVVGTGL 464

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           V +Y+K GN+ +A ++F+R  ++D+VSW +MI  Y  HGH + AL +F +M+    + D 
Sbjct: 465 VDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDH 524

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           I F  ++TAC+HAGLVD+G QYF  M +++ + P +EHY+C+VDL  RAG L++A  II 
Sbjct: 525 IAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIK 584

Query: 642 RMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQE 687
            M     A VW  +L ACR              L  L P ++  YVLLSN+YA    W++
Sbjct: 585 NMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWED 644

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
            A++RK+M ++ VKK+ G S + V     +FL GD +HPQS QIY+ LE L  +++ AGY
Sbjct: 645 VAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGY 704

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            P+T+  LQD+++E KE ILS HSE+LAI+FG++ T  G P++I+KNLRVC DCH   K 
Sbjct: 705 VPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKF 764

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ISK+  R+I+VRD NRFHH K G CSCGDYW
Sbjct: 765 ISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/431 (31%), Positives = 219/431 (50%), Gaps = 15/431 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR P+R+ V +N ++  Y ++    EAL LF  ++  G+    STL SV+  C  L
Sbjct: 175 RQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHL 234

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+HC  ++SG   DV V   LV++Y +  NV    ++F+ M   +V SW +++
Sbjct: 235 LALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAII 294

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY+ N  +   L  F+RMQV GIKPNS T  +VL   A    +    Q+H   I++G E
Sbjct: 295 GGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFE 354

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NAL++MY K   V  A  +F+ M  ++ + WN++++GY  +    EA   F  M
Sbjct: 355 SNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEM 414

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +      VSV+  CA    L   +Q+H   +++G + +  + TGL+  Y+KCG +
Sbjct: 415 QAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNV 474

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A K+F  M E +DVVSWT MI  +  +G  + A+  F +M   G + +   ++ ILTA
Sbjct: 475 NTAQKLFERMPE-QDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTA 533

Query: 392 -------QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID-E 441
                     +  FQ     +K++Y           L++   + G LDEA  + + +  E
Sbjct: 534 CSHAGLVDQGLQYFQC----MKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLE 589

Query: 442 KDIVAWSAMLA 452
            D   W A+L 
Sbjct: 590 PDANVWGALLG 600


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 315/778 (40%), Positives = 450/778 (57%), Gaps = 24/778 (3%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
            L  VLK   C+ D   G QVH   + +GF  DV V+ +LV +Y     ++D RRVFD+ 
Sbjct: 12  ALPVVLK---CVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEA 68

Query: 140 -NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
            +E N VSW  L+S Y +N      +++F  M   GI+P  F FS V+        +   
Sbjct: 69  GSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAG 128

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            QVH MV++ G E      NAL+ MY+K   V  A  +F+ M D D ++WN++++G V N
Sbjct: 129 RQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLN 188

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
                A E    M  +G         S++K CA      L RQ+H  ++K   D D  I 
Sbjct: 189 GHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIG 248

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
            GL+  Y+K   ++DA K+F  M   +D++ W A+ISG    G  D A + F  + +EG+
Sbjct: 249 VGLVDMYAKNHFLDDAMKVFDWMSH-RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGL 307

Query: 379 RPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
             N  T + +L +    + A +  QVHA   K  +     V   L+++Y K   L +A +
Sbjct: 308 GVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIR 367

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VFE     DI+A ++M+   +Q    EGA+K++ ++  +G++P+ F  SS++NAC + SA
Sbjct: 368 VFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 427

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
             EQGKQ HA  IK +  +     +ALV  Y+K G+IE A   F    +R +VSW++MI 
Sbjct: 428 -YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIG 486

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           G AQHGH K+ALE+F  M  + +  + IT   V+ AC HAGLVDE ++YF+ M     I 
Sbjct: 487 GLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGID 546

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
            T EHYSCM+DL  RAG L+ AM+++N MPF A+A+VW  +L A R              
Sbjct: 547 RTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEK 606

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L  L+P  S  +VLL+N YA++G W E A+VRKLM D  +KKE   SW+EVK+K ++F+ 
Sbjct: 607 LFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIV 666

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           GD SHP + +IYSKL+EL   +  AGY P+    L D+D   KE +LS HSERLA+AF L
Sbjct: 667 GDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFAL 726

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++TP GAP+++ KNLR+C DCH   K IS +  R+I++RD NRFHHF++G CSCGDYW
Sbjct: 727 LSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 168/358 (46%), Gaps = 1/358 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F++ P  + V +N L+     +     A+ L L ++  GL      LSS+LK C     
Sbjct: 166 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 225

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GRQ+H   +K+    D  +   LVD+Y + + ++D  +VFD M+  +++ W +L+SG
Sbjct: 226 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISG 285

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            +    +D    +F+ ++ EG+  N  T + VL   A     +   QVH +  K G    
Sbjct: 286 CSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFD 345

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N LI  Y K   + DA  VF+     D I   SM+      +    A + F  M  
Sbjct: 346 AHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLR 405

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E       S++  CA+       +Q+H+ ++K     D      L+  Y+KCG +ED
Sbjct: 406 KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIED 465

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           A   FS + E + VVSW+AMI G  Q+G    A+  F +M  EG+ PN  T + +L A
Sbjct: 466 AELAFSSLPE-RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCA 522



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%)

Query: 60  QEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSL 119
           + A+ LF+ + R GL      LSS+L  C  L  +  G+QVH   +K  F  D     +L
Sbjct: 394 EGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNAL 453

Query: 120 VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
           V  Y +  ++ED    F  + E  VVSW++++ G A++    R LELF RM  EGI PN 
Sbjct: 454 VYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNH 513

Query: 180 FTFSTVLGVLADEGIVATA 198
            T ++VL      G+V  A
Sbjct: 514 ITMTSVLCACNHAGLVDEA 532


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 314/827 (37%), Positives = 473/827 (57%), Gaps = 23/827 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +FD+  +RN + +  ++         QEA + FL ++R G      T  S+L      
Sbjct: 85  QLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASA 144

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               + ++VH   V +G A D+ V  +LV +Y ++ +++D R VFD M E ++ SWT ++
Sbjct: 145 GALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMI 204

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL--GVLADEGIVATAVQVHTMVIKNG 209
            G A++        LF +M+  G  PN  T+ ++L    +   G +    +VH    K G
Sbjct: 205 GGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAG 264

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V NALI MY K   + DAR VFDGM DRD I+WN+M+ G   N    EAF  F 
Sbjct: 265 FISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFL 324

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G     +T++S++    +T      +++H   ++ G+  D  + +  +  Y +CG
Sbjct: 325 KMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCG 384

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++DA  IF  +  +++V +W AMI G  Q      A++ F QM REG  P+  T+  IL
Sbjct: 385 SIDDAQLIFDKL-AVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNIL 443

Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +A       +    VH++ I         VG AL++ Y K G    A +VF+ + E+++ 
Sbjct: 444 SANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVT 502

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+ M++G AQ G    A  ++ Q+  EG+ P+  T+ S+++AC A + A+E  K+ H+ 
Sbjct: 503 TWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSAC-ASTGALEWVKEVHSH 561

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           ++ A L + L V +ALV MY+K G+++ A  VF    +RD+ SW  MI G AQHG    A
Sbjct: 562 AVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDA 621

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L++F +M+ +  + +G +F+ V++AC+HAGLVDEG++ F  +  ++ I PTMEHY+CMVD
Sbjct: 622 LDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVD 681

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAI 671
           L  RAG LE+A   I  MP       W  +L AC                + L+P  ++ 
Sbjct: 682 LLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSAST 741

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLLSN+YAATG+W+++  VR +M  R ++KE G SWIEV N+ +SF+ GD SHP+S +I
Sbjct: 742 YVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEI 801

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           Y+KL++L  RLK  GY PDT  VL++ D E+KE  L  HSE+LAI +GL+ TP   P+++
Sbjct: 802 YAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRV 861

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVC DCHT  K ISK+  R+IV RD  RFHHFK+G+CSCGDYW
Sbjct: 862 YKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 184/597 (30%), Positives = 314/597 (52%), Gaps = 10/597 (1%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           Y      ++A+ ++  +RR G      T  S+LK C       +G+++H   ++SGF  D
Sbjct: 5   YAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSD 64

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           V V T+LV++Y++  +++D + +FD M E NV+SWT ++ G A           F +MQ 
Sbjct: 65  VRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQR 124

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
           EG  PNS+T+ ++L   A  G +    +VH+  +  G  +   V NAL+ MY KS  + D
Sbjct: 125 EGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDD 184

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA- 291
           AR VFDGM +RD  +W  M+ G   +    EAF  F  M   G     +T++S++   A 
Sbjct: 185 ARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAI 244

Query: 292 -TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
            +T  L   +++H    K G   D  +   L+  Y+KCG ++DA  +F  M + +DV+SW
Sbjct: 245 TSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD-RDVISW 303

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
            AMI G  QNG    A   F +M +EG  P+  TY  +L    +   +    +VH H ++
Sbjct: 304 NAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVE 363

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
                   VG+A ++ Y++ G +D+A  +F+ +  +++  W+AM+ G AQ      A+ +
Sbjct: 364 VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSL 423

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + Q+  EG  P+  TF ++++A      A+E  K+ H+ +I A L + L V +ALV MY+
Sbjct: 424 FLQMRREGFFPDATTFVNILSA-NVGEEALEWVKEVHSYAIDAGLVD-LRVGNALVHMYA 481

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K GN   A +VF    +R++ +W  MI G AQHG   +A  +F +M R+ +  D  T++ 
Sbjct: 482 KCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVS 541

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +++AC   G ++  ++     VN   +   +   + +V +Y++ G ++ A  + + M
Sbjct: 542 ILSACASTGALEWVKEVHSHAVNA-GLVSDLRVGNALVHMYAKCGSVDDARRVFDDM 597



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 309/659 (46%), Gaps = 81/659 (12%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GYA     +  ++++ +M+ EG +PN  T+ ++L        +    ++H  +I++G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +    V  AL++MY+K   + DA+ +FD M +R+ I+W  M+ G        EAF  F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G      T+VS++   A+   L   +++HS  +  G+  D  +   L+  Y+K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++DA  +F  M E +D+ SWT MI G  Q+G    A + F QM R G  PN  TY  IL
Sbjct: 181 SIDDARVVFDGMVE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 390 TAQPAVSPF------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            A    S        +VH H  K  +     VG AL++ Y K G +D+A  VF+ + ++D
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +++W+AM+ G AQ G    A  I+ ++  EG  P+  T+ S++N   + + A E  K+ H
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVS-TGAWEWVKEVH 358

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
             +++  L + L V SA V MY + G+I+ A  +F +   R++ +WN+MI G AQ    +
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITA----------------CTHAGLVD--------- 598
           +AL +F +MRR+    D  TF+ +++A                   AGLVD         
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVH 478

Query: 599 ---------EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM---PFA 646
                      +Q FD MV  +     +  ++ M+   ++ G   +A  +  +M      
Sbjct: 479 MYAKCGNTMYAKQVFDDMVERN-----VTTWTVMISGLAQHGCGHEAFSLFLQMLREGIV 533

Query: 647 ASATVWRTVLAACRLISL-----QPHDSAIYV----------LLSNMYAATGHWQERARV 691
             AT + ++L+AC          + H  A+             L +MYA  G   +  RV
Sbjct: 534 PDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRV 593

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
              M +R V     YSW        + + G ++  Q  +    L +L  ++K  G+KP+
Sbjct: 594 FDDMLERDV-----YSW--------TVMIGGLA--QHGRGLDAL-DLFVKMKLEGFKPN 636


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 320/837 (38%), Positives = 475/837 (56%), Gaps = 29/837 (3%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK       + +FD  P    V ++ L+  Y  +++ ++AL  F  +R   +      
Sbjct: 46  FYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFV 105

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L  VLK   C  D  FG Q+H   + +G   D+ V+ +LV +Y     V++ R VFD+  
Sbjct: 106 LPVVLK---CAPDAGFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAG 162

Query: 141 -ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E N VSW  L+S Y +N      +++F  M   G++PN F FS V+        +    
Sbjct: 163 CERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGR 222

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           +VH MVI+ G +      NAL+ MY K   +R A  VF  + + D ++WN+ ++G V + 
Sbjct: 223 KVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHG 282

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
               A E    M  +G      T  S++K CA +    L RQ+H  ++K   D D+ I  
Sbjct: 283 HDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAF 342

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           GL+  Y+K G ++DA K+F  + + +D+V W A+ISG         A++ FC+M +EG  
Sbjct: 343 GLVDMYAKHGLLDDAKKVFDWIPQ-RDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFD 401

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N  T + +L +  ++       QVHA   K  +     V   L+++Y K   L+ A +V
Sbjct: 402 VNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRV 461

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE     DI+A+++M+   +Q    E A+K++ ++  +G+ P+ F  SS++NAC + SA 
Sbjct: 462 FEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSA- 520

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            EQGKQ HA  IK +  + +   +ALV  Y+K G+IE A   F    ++ +VSW++MI G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGG 580

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            AQHGH K+AL+VF  M  + +  + IT   V+ AC HAGLVDE ++YF+ M     I  
Sbjct: 581 LAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIER 640

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
           T EHY+CM+DL  RAG L+ AM+++N MPF  +A VW  +LAA R              L
Sbjct: 641 TEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKL 700

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L+P  S  +VLL+N YA+ G W + A+VRKLM D KVKKE   SW+E+K+K ++F+ G
Sbjct: 701 FILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVG 760

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP++  IY+KL+EL   +  AGY P+    L D+D   KE +LS HSERLA+AF L+
Sbjct: 761 DKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALI 820

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +TPAGAP+++ KNLR+C DCH   K IS +  R+I++RD NRFHHF++G CSC DYW
Sbjct: 821 STPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 163/555 (29%), Positives = 273/555 (49%), Gaps = 17/555 (3%)

Query: 97  GRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           G  +H   +KSG FA   N    L+  Y +       RRVFD++ +   VSW+SL++ Y+
Sbjct: 23  GAHIHAHLLKSGLFAVFRN---HLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVTAYS 79

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            N M    L  F  M+   ++ N F    VL    D G      Q+H + +  G      
Sbjct: 80  NNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHALAMATGLGGDIF 136

Query: 216 VCNALISMYLKSKMVRDARAVFD--GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           V NAL++MY     V +AR VFD  G E R++++WN +++ YV N+    A + F  M  
Sbjct: 137 VANALVAMYGGFGFVDEARMVFDEAGCE-RNTVSWNGLMSAYVKNDRCSHAVKVFGEMVW 195

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +     F  V+  C  +++L   R++H+ V++ G D D      L+  YSK G +  
Sbjct: 196 GGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRM 255

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A+ +F  + E  DVVSW A ISG + +G    A+    QM   G+ PN FT S IL A  
Sbjct: 256 AAVVFGKVPE-TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACA 314

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
               F    Q+H  ++K N +    +   L++ Y K G+LD+A KVF+ I ++D+V W+A
Sbjct: 315 GSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNA 374

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +++G +       A+ ++ ++  EG   N  T ++V+ + TA   A+   +Q HA + K 
Sbjct: 375 LISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS-TASLEAISDTRQVHALAEKL 433

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              +   V + L+  Y K   +  A  VF++    D++++ SMI   +Q  H + A+++F
Sbjct: 434 GFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLF 493

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            EM R+ L+ D      ++ AC      ++G+Q    ++    +       + +V  Y++
Sbjct: 494 MEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAG-NALVYTYAK 552

Query: 630 AGMLEKAMDIINRMP 644
            G +E A    + +P
Sbjct: 553 CGSIEDADLAFSGLP 567


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 315/830 (37%), Positives = 468/830 (56%), Gaps = 29/830 (3%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            Q +FD+  +RN + +  ++         QEA +LFL ++R G      T  S+L      
Sbjct: 274  QLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASA 333

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                + ++VH   V +G A D+ V  +LV +Y ++ +++D R VFD M E ++ SWT ++
Sbjct: 334  GALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMI 393

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             G A++        LF +MQ  G  PN    +T L +L    I +T+      V+    E
Sbjct: 394  GGLAQHGRGQEAFSLFLQMQRNGCLPN---LTTYLSILNASAIASTSALEWVKVVHKHAE 450

Query: 212  VV-----TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
                     + NALI MY K   + DAR VFDGM DRD I+WN+M+ G   N    EAF 
Sbjct: 451  EAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFT 510

Query: 267  TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
             F  M   G     +T++S++    +T  L    ++H   ++ G+  D  + +  +  Y 
Sbjct: 511  VFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYI 570

Query: 327  KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
            +CG ++DA  +F  +  ++ V +W AMI G  Q      A++ F QM REG  P+  T+ 
Sbjct: 571  RCGSIDDARLLFDKL-SVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFI 629

Query: 387  IILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             IL+A       +    VH+H           VG AL++ Y K G +  A +VF+ + E+
Sbjct: 630  NILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVER 688

Query: 443  DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            ++  W+ M+ G AQ G    A   + Q+  EG+ P+  T+ S+++AC A + A+E  K+ 
Sbjct: 689  NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSAC-ASTGALEWVKEV 747

Query: 503  HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
            H  ++ A L + L V +ALV MY+K G+I+ A  VF    +RD+ SW  MI G AQHG  
Sbjct: 748  HNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRG 807

Query: 563  KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
             +AL+ F +M+ +  + +G +++ V+TAC+HAGLVDEG++ F  M  ++ I PTMEHY+C
Sbjct: 808  LEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTC 867

Query: 623  MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHD 668
            MVDL  RAG+LE+A   I  MP       W  +L AC                + L+P  
Sbjct: 868  MVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKS 927

Query: 669  SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
            ++ YVLLSN+YAATG W+++  VR +M  + ++KE G SWIEV N+ +SF+ GD SHP+S
Sbjct: 928  ASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPES 987

Query: 729  NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
             +IY++L +L  RLK  GY PDT  VL++ D EHKE  L  HSE+LAI +GL+ T +  P
Sbjct: 988  KEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDP 1047

Query: 789  LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +++ KNLRVC DCHT  K ISK+  R+IV RD  RFHHFK+G+CSCGDYW
Sbjct: 1048 IRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 190/619 (30%), Positives = 328/619 (52%), Gaps = 12/619 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKTCGC 90
           + +FD+  ++N   +  ++  Y      ++A+ ++  +R+  G P    T  S+LK C C
Sbjct: 173 RQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQP-NEITYLSILKACCC 231

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
             +  +G+++H   ++SGF  DV V T+LV++Y++  ++ED + +FD M E NV+SWT +
Sbjct: 232 PVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVM 291

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + G A          LF +MQ EG  PNS+T+ ++L   A  G +    +VH+  +  G 
Sbjct: 292 IGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 351

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +   V NAL+ MY KS  + DAR VFDGM +RD  +W  M+ G   +    EAF  F  
Sbjct: 352 ALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 411

Query: 271 MGLAGAELTRSTFVSVIKLC--ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           M   G     +T++S++     A+T  L   + +H    + G   D  I   L+  Y+KC
Sbjct: 412 MQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKC 471

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++DA  +F  M + +DV+SW AM+ G  QNG    A   F QM +EG+ P+  TY  +
Sbjct: 472 GSIDDARLVFDGMCD-RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSL 530

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L    +        +VH H ++T     F VG+A ++ Y++ G +D+A  +F+ +  + +
Sbjct: 531 LNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHV 590

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
             W+AM+ G AQ      A+ ++ Q+  EG  P+  TF ++++A      A+E  K+ H+
Sbjct: 591 TTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSA-NVDEEALEWVKEVHS 649

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
            +  A L + L V +ALV  YSK GN++ A +VF    +R++ +W  MI G AQHG    
Sbjct: 650 HATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHD 708

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           A   F +M R+ +  D  T++ +++AC   G ++  ++  +  V+   +   +   + +V
Sbjct: 709 AFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSA-GLVSDLRVGNALV 767

Query: 625 DLYSRAGMLEKAMDIINRM 643
            +Y++ G ++ A  + + M
Sbjct: 768 HMYAKCGSIDDARSVFDDM 786



 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 203/738 (27%), Positives = 346/738 (46%), Gaps = 76/738 (10%)

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG 132
           G+ +   +  ++L+ C    D +  +QVH   +KSG  +++ V+  L+ +Y+R   ++  
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCA 172

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           R+VFD + + N+  WT+++ GYA     +  + ++ +M+ E  +PN  T+ ++L      
Sbjct: 173 RQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCP 232

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             +    ++H  +I++G +    V  AL++MY+K   + DA+ +FD M +R+ I+W  M+
Sbjct: 233 VNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMI 292

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            G        EAF  F  M   G      T+VS++   A+   L   +++HS  +  G+ 
Sbjct: 293 GGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA 352

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            D  +   L+  Y+K G ++DA  +F  M E +D+ SWT MI G  Q+G    A + F Q
Sbjct: 353 LDLRVGNALVHMYAKSGSIDDARVVFDGMTE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQ 411

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ------VHAHIIKTNYEKSFSVGTALLNAYVKK 426
           M R G  PN  TY  IL A    S         VH H  +  +     +G AL++ Y K 
Sbjct: 412 MQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKC 471

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G +D+A  VF+ + ++D+++W+AM+ G AQ G    A  ++ Q+  EG+ P+  T+ S++
Sbjct: 472 GSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           N     + A+E   + H  +++  L +   V SA + MY + G+I+ A  +F +   R +
Sbjct: 532 NT-HGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHV 590

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA---------------- 590
            +WN+MI G AQ    ++AL +F +M+R+    D  TFI +++A                
Sbjct: 591 TTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSH 650

Query: 591 CTHAGLVD------------------EGQQYFDIMVNEHHIYPTM-----EHYSCMVDLY 627
            T AGLVD                    +Q FD MV  +    TM       + C  D +
Sbjct: 651 ATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAF 710

Query: 628 S------RAGMLEKAMDIINRMPFAAS--ATVWRTVLAACRLISLQPHDSAIYVLLSNMY 679
           S      R G++  A   ++ +   AS  A  W   +    + +    D  +   L +MY
Sbjct: 711 SHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMY 770

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A  G   +   V   M +R V     +SW          + G   H +       LE L 
Sbjct: 771 AKCGSIDDARSVFDDMVERDV-----FSWT-------VMIGGLAQHGRG------LEALD 812

Query: 740 --TRLKDAGYKPDT-SYV 754
              ++K  G+KP+  SYV
Sbjct: 813 FFVKMKSEGFKPNGYSYV 830



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/510 (30%), Positives = 262/510 (51%), Gaps = 23/510 (4%)

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           D V  L  R+Q +GI  +SF++  +L     +  +  A QVH  +IK+G E    V N L
Sbjct: 101 DAVAMLKIRVQ-QGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           + +Y++   ++ AR VFD +  ++   W +M+ GY       +A   ++ M     +   
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
            T++S++K C     L+  +++H+ ++++G   D  + T L+  Y KCG +EDA  IF  
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-- 398
           M E ++V+SWT MI G    G    A + F QM REG  PN +TY  IL A  +      
Sbjct: 280 MVE-RNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEW 338

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             +VH+H +         VG AL++ Y K G +D+A  VF+ + E+DI +W+ M+ G AQ
Sbjct: 339 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQ 398

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA-CTAPSAAVEQGKQFHACSIKAKLNNAL 515
            G  + A  ++ Q+   G  PN  T+ S++NA   A ++A+E  K  H  + +A   + L
Sbjct: 399 HGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDL 458

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            + +AL+ MY+K G+I+ A  VF     RD++SWN+M+ G AQ+G   +A  VF +M+++
Sbjct: 459 RIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQE 518

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH-------IYPTMEHYSCMVDLYS 628
            L  D  T++ ++   TH G  D  +      VNE H       +       S  + +Y 
Sbjct: 519 GLVPDSTTYLSLLN--TH-GSTDALE-----WVNEVHKHAVETGLISDFRVGSAFIHMYI 570

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           R G ++ A  + +++      T W  ++  
Sbjct: 571 RCGSIDDARLLFDKLS-VRHVTTWNAMIGG 599



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 5/286 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FD   +RN   +  ++    +     +A + FL + R G+    +T  S+L  C
Sbjct: 676 KYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSAC 735

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                  + ++VH   V +G   D+ V  +LV +Y +  +++D R VFDDM E +V SWT
Sbjct: 736 ASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWT 795

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA-VQVHTMVIK 207
            ++ G A++      L+ F +M+ EG KPN +++  VL   +  G+V     Q  +M   
Sbjct: 796 VMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQD 855

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVT-NELHMEAF 265
            G E        ++ +  ++ ++ +A      M  + D   W +++   VT   L M  F
Sbjct: 856 YGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEF 915

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
                + L     + ST+V +  + A T +      + S + + GI
Sbjct: 916 AAKERLKLKPK--SASTYVLLSNIYAATGKWEQKLLVRSMMQRKGI 959


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 307/785 (39%), Positives = 470/785 (59%), Gaps = 32/785 (4%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +L+T     + + G+  H   V SG A D  +S +L+ +Y +  ++   R+VFD   E +
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 144 VVSWTSLLSGYARN-KMND----RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           +V+W ++L  YA +   ND      L LF  ++         T + VL +  + G +  A
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             VH   IK G E    V  AL+++Y K   +RDAR +FD M +RD + WN M+ GYV  
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLC--ATTKELRLARQLHSQVLKNGIDFDHN 316
            L  EAF+ F+    +G      +   ++  C  A T +L L +Q+H   +K+G+D D +
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVS 322

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +   L+  YSK G    A ++F+ M+ + D++SW +MIS   Q+   + +VN F  +  E
Sbjct: 323 VANSLVNMYSKMGCAYFAREVFNDMKHL-DLISWNSMISSCAQSSLEEESVNLFIDLLHE 381

Query: 377 GVRPNGFTYSIILTAQPAVS---------PFQVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           G++P+ FT + I  A  A +           Q+HAH IK  ++    V + +L+ Y+K G
Sbjct: 382 GLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 441

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +  A  VF  I   D VAW++M++G    G+ + A++IY ++    V P+E+TF+++I 
Sbjct: 442 DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIK 501

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           A +  +A +EQG+Q HA  IK    +   V ++LV MY+K GNIE A  +FK+   R++ 
Sbjct: 502 ASSCVTA-LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA 560

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
            WN+M+ G AQHG+ ++A+ +FK M+   +E D ++FIG+++AC+HAGL  E  +Y   M
Sbjct: 561 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 620

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------- 660
            N++ I P +EHYSC+VD   RAG++++A  +I  MPF ASA++ R +L ACR       
Sbjct: 621 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVET 680

Query: 661 -------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKN 713
                  L +L+P DSA YVLLSN+YAA   W +    RK+M  + VKK+ G+SWI+VKN
Sbjct: 681 GKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKN 740

Query: 714 KTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSER 773
             + F+  D SHPQ++ IY K+EE+   +++ GY PDT +VL D++DE KE  L  HSE+
Sbjct: 741 MLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEK 800

Query: 774 LAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCS 833
           LAIA+GL++TPA   ++++KNLRVCGDCH  IK ISK+  R+IV+RD NRFHHF++G+CS
Sbjct: 801 LAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCS 860

Query: 834 CGDYW 838
           CGDYW
Sbjct: 861 CGDYW 865



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 165/547 (30%), Positives = 281/547 (51%), Gaps = 31/547 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYC-----RDSLHQEALNLFLGIRRLGLPLFGS----TLS 82
           + +FD +P+R+ V +N +L  Y       D   QE L+LF    RL     GS    TL+
Sbjct: 132 RQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLF----RLLRASLGSTTRMTLA 187

Query: 83  SVLKTC---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
            VLK C   GCL+       VH   +K G   DV VS +LV++Y +   + D R +FD M
Sbjct: 188 PVLKLCLNSGCLWA---AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 244

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG--VLADEGIVAT 197
            E +VV W  +L GY +  +     +LF      G++P+ F+   +L   + A    +  
Sbjct: 245 RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLEL 304

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             QVH + +K+G +   SV N+L++MY K      AR VF+ M+  D I+WNSM++    
Sbjct: 305 GKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ 364

Query: 258 NELHMEAFETFNNM---GLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           + L  E+   F ++   GL     T +  T  +  K C     L   +Q+H+  +K G D
Sbjct: 365 SSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 424

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            D ++ +G++  Y KCG M +A  +F+ +    D V+WT+MISG + NG  D A+  + +
Sbjct: 425 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD-VAWTSMISGCVDNGNEDQALRIYHR 483

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M +  V P+ +T++ ++ A   V+      Q+HA++IK +      VGT+L++ Y K G 
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           +++A ++F+ ++ ++I  W+AML G AQ G+ E AV +++ + S G++P+  +F  +++A
Sbjct: 544 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 603

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C+      E  +  H+      +   +   S LV    + G ++ A +V +    +   S
Sbjct: 604 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASAS 663

Query: 549 WNSMICG 555
            N  + G
Sbjct: 664 INRALLG 670


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 291/777 (37%), Positives = 468/777 (60%), Gaps = 20/777 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   + + C  L D   G+QV    ++SG   ++    +L+ L+    N+ + R+ FD +
Sbjct: 63  TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
               VV+W ++++GYA+         LF +M  E ++P+  TF  VL   +    +    
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGK 182

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           + H  VIK G      +  AL+SMY+K   +  AR VFDG+  RD  T+N M+ GY  + 
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +AF+ F  M   G +  R +F+S++  C+T + L   + +H+Q +  G+  D  + T
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y  CG +E A ++F  M+ ++DVVSWT MI G+ +N  I+ A   F  M  EG++
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMK-VRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQ 361

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+  TY  I+ A  + +      ++H+ +++  +     V TAL++ Y K G + +A +V
Sbjct: 362 PDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQV 421

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ +  +D+V+WSAM+  Y + G  E A + +  +    V+P+  T+ +++NAC     A
Sbjct: 422 FDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNAC-GHLGA 480

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++ G + +  +IKA L + + V +AL+ M  K G+IE A  +F+   +RD+V+WN MI G
Sbjct: 481 LDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGG 540

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y+ HG+ ++AL++F  M ++    + +TF+GV++AC+ AG V+EG+++F  +++   I P
Sbjct: 541 YSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVP 600

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------------- 661
           TME Y CMVDL  RAG L++A  +INRMP   ++++W T+LAACR+              
Sbjct: 601 TMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERC 660

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           +  +P+D A+YV LS+MYAA G W+  A+VRK+M  R V+KE G +WIEV+ K ++F+  
Sbjct: 661 LMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVE 720

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHPQ+ +IY++L  L T +K  GY P T  VL ++ ++ KE  +S HSE+LAIA+G++
Sbjct: 721 DRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVL 780

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + P+GAP++I KNLRVCGDCH+  K ISK+  R+I+ RD +RFHHFK G+CSCGDYW
Sbjct: 781 SLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 246/520 (47%), Gaps = 42/520 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+   +N ++  Y +    ++A  LF  +++ G      +  S+L  C   
Sbjct: 217 RQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTP 276

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +G+ VH +C+ +G   DV V+T+L+ +YM   ++E  RRVFD M   +VVSWT ++
Sbjct: 277 EALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMI 336

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GYA N   +    LF  MQ EGI+P+  T+  ++   A    ++ A ++H+ V++ G  
Sbjct: 337 RGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFG 396

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  AL+ MY K   ++DAR VFD M  RD ++W++M+  YV N    EAFETF+ M
Sbjct: 397 TDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLM 456

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                E    T+++++  C     L L  ++++Q +K  +     +   L+    K G +
Sbjct: 457 KRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSI 516

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E A  IF  M + +DVV+W  MI G+  +G    A++ F +M +E  RPN  T+      
Sbjct: 517 ERARYIFENMVQ-RDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTF------ 569

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKDIVA---- 446
                                      +L+A  + G ++E  + F  L+D + IV     
Sbjct: 570 -------------------------VGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMEL 604

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           +  M+    + G+ + A  +  ++    +KPN   +S+++ AC          +    C 
Sbjct: 605 YGCMVDLLGRAGELDEAELLINRMP---LKPNSSIWSTLLAACRIYGNLDVAERAAERCL 661

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           +    + A+ V   L  MY+  G  E+ ++V K    R +
Sbjct: 662 MSEPYDGAVYVQ--LSHMYAAAGMWENVAKVRKVMESRGV 699



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 114/227 (50%), Gaps = 2/227 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FD   +R+ V ++ ++  Y  +   +EA   F  ++R  +     T  ++L  C
Sbjct: 416 KDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNAC 475

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L     G +++ + +K+     + V  +L+++ ++  ++E  R +F++M + +VV+W 
Sbjct: 476 GHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWN 535

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            ++ GY+ +      L+LF RM  E  +PNS TF  VL   +  G V    +  + ++  
Sbjct: 536 VMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDG 595

Query: 209 GGEVVT-SVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVA 253
            G V T  +   ++ +  ++  + +A  + + M  + +S  W++++A
Sbjct: 596 RGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLA 642


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  583 bits (1504), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 327/839 (38%), Positives = 472/839 (56%), Gaps = 31/839 (3%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK       + +FD +P    V ++ L+  Y  ++L +EAL  F  +R  G+      
Sbjct: 46  FYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFA 105

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM- 139
           L  VLK   C  D   G QVH   V +G + D+ V+ +LV +Y     V++ RRVFD+  
Sbjct: 106 LPIVLK---CAPDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAA 162

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + N VSW  ++S + +N      +ELF  M   G++PN F FS V+        +    
Sbjct: 163 RDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGR 222

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           +VH MV++ G +      NAL+ MY K   +  A  VF  +   D ++WN+ ++G V + 
Sbjct: 223 KVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHG 282

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA--RQLHSQVLKNGIDFDHNI 317
               A E    M  +G      T  S++K CA       A  RQ+H  ++K   D D  I
Sbjct: 283 HDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYI 342

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              L+  Y+K G ++DA K+F  +   KD++ W A+ISG    G    +++ FC+M +EG
Sbjct: 343 GVALVDMYAKYGLLDDARKVFEWIPR-KDLLLWNALISGCSHGGCHGESLSLFCRMRKEG 401

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
              N  T + +L +  ++       QVHA   K  +     V   L+++Y K   L  A 
Sbjct: 402 SDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYAN 461

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           KVFE     +I+A+++M+   +Q    E A+K++ ++  +G++P+ F  SS++NAC + S
Sbjct: 462 KVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 521

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
           A  EQGKQ HA  IK K    +   +ALV  Y+K G+IE A   F     + +VSW++MI
Sbjct: 522 A-YEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMI 580

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            G AQHGH K+AL+VF+ M  + +  + IT   V+ AC HAGLVDE + YF  M     I
Sbjct: 581 GGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGI 640

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------------- 660
             T EHYSCM+DL  RAG L+ AM+++N MPF A+A VW  +LAA R             
Sbjct: 641 DRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAE 700

Query: 661 -LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
            L  L+P  S  +VLL+N YA+ G W E A+VRKLM D KVKKE   SW+E+K++ ++F+
Sbjct: 701 KLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFI 760

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
            GD SHP++  IY+KLEEL   +  AGY P+    L D+D   KE +LS HSERLA+AF 
Sbjct: 761 VGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFA 820

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L++TPAGAP+++ KNLR+C DCH   K ISK+  R+I++RD NRFHHF +G CSCGDYW
Sbjct: 821 LISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 272/556 (48%), Gaps = 15/556 (2%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G  +H   +KSG          L+  Y +       RRVFD+  +   VSW+SL++ Y+
Sbjct: 22  LGAHIHAHLLKSGLLHAFR--NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYS 79

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            N +    L  F  M+  G++ N F    VL    D G+    VQVH + +  G      
Sbjct: 80  NNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQVHAVAVSTGLSGDIF 136

Query: 216 VCNALISMYLKSKMVRDARAVFD-GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           V NAL++MY     V +AR VFD    DR++++WN M++ +V N+   +A E F  M  +
Sbjct: 137 VANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWS 196

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G       F  V+  C  +++L   R++H+ V++ G D D      L+  YSK G +  A
Sbjct: 197 GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMA 256

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
           + +F  + +  DVVSW A ISG + +G    A+    QM   G+ PN FT S IL A   
Sbjct: 257 ALVFGKVPK-TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAG 315

Query: 395 VSPF------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                     Q+H  +IK   +    +G AL++ Y K G+LD+A KVFE I  KD++ W+
Sbjct: 316 AGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWN 375

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+++G +  G    ++ ++ ++  EG   N  T ++V+ + TA   A+    Q HA + K
Sbjct: 376 ALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKS-TASLEAISDTTQVHALAEK 434

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
               +   V + L+  Y K   +  A++VF+     +++++ SMI   +Q  H + A+++
Sbjct: 435 IGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKL 494

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F EM R+ LE D      ++ AC      ++G+Q    ++    +       + +V  Y+
Sbjct: 495 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAG-NALVYTYA 553

Query: 629 RAGMLEKAMDIINRMP 644
           + G +E A    + +P
Sbjct: 554 KCGSIEDADLAFSGLP 569



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 192/377 (50%), Gaps = 18/377 (4%)

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV--V 348
           A T+ L L   +H+ +LK+G+   H  R  L+  YSKC     A ++F    E  D   V
Sbjct: 15  AATQSLFLGAHIHAHLLKSGL--LHAFRNHLLSFYSKCRLPGSARRVFD---ETPDPCHV 69

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP-AVSPFQVHAHIIKT 407
           SW+++++ +  N     A+  F  M   GVR N F   I+L   P A    QVHA  + T
Sbjct: 70  SWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVHAVAVST 129

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
                  V  AL+  Y   G +DEA +VF E   +++ V+W+ M++ + +      AV++
Sbjct: 130 GLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVEL 189

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + ++   GV+PNEF FS V+NACT  S  +E G++ HA  ++   +  +  ++ALV MYS
Sbjct: 190 FGEMVWSGVRPNEFGFSCVVNACTG-SRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYS 248

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G+I  A+ VF +  K D+VSWN+ I G   HGH + ALE+  +M+   L  +  T   
Sbjct: 249 KLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSS 308

Query: 587 VI--TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKAMDIINR 642
           ++   A   AG    G+Q    M+         + Y    +VD+Y++ G+L+ A  +   
Sbjct: 309 ILKACAGAGAGAFALGRQIHGFMIKA---CADSDDYIGVALVDMYAKYGLLDDARKVFEW 365

Query: 643 MPFAASATVWRTVLAAC 659
           +P      +W  +++ C
Sbjct: 366 IP-RKDLLLWNALISGC 381


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 310/825 (37%), Positives = 480/825 (58%), Gaps = 20/825 (2%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            + +FD   +R+ V +  +L    +    +EA+ LF  +   G+       SSVL  C  +
Sbjct: 225  KKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKV 284

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              +  G Q+H   +K GF+ +  V  +LV LY R  N     +VF+ M + + VS+ SL+
Sbjct: 285  EFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLI 344

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            SG ++   +D+ LELF +M ++ +KP+  T +++L   +  G +    Q H+  IK G  
Sbjct: 345  SGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMS 404

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                +  AL+ +Y+K   ++ A   F   E  + + WN M+  Y   +   E+F+ F  M
Sbjct: 405  SDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQM 464

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             + G E  + T+ S+++ C++ + + L  Q+H+QVLK G  F+  + + L+  Y+K GK+
Sbjct: 465  QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKL 524

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            + A KIF  ++E KDVVSWTAMI+G+ Q+     A+N F +M  +G+  +   ++  ++A
Sbjct: 525  DHALKIFRRLKE-KDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISA 583

Query: 392  QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
               +       Q+HA    + Y    SVG AL++ Y + G + +A   F+ I  KD ++W
Sbjct: 584  CAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISW 643

Query: 448  SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
            +++++G+AQ G  E A+ ++ Q++  G + N FTF   ++A  A  A V+ GKQ HA  I
Sbjct: 644  NSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSA-AANVANVKLGKQIHAMII 702

Query: 508  KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
            K   ++   VS+ L+T+Y+K GNI+ A   F    +++ +SWN+M+ GY+QHGH  KAL 
Sbjct: 703  KTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALS 762

Query: 568  VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
            +F++M++  +  + +TF+GV++AC+H GLVDEG +YF  M   H + P  EHY+C+VDL 
Sbjct: 763  LFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLL 822

Query: 628  SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
             R+G+L +A   +  MP    A V RT+L+AC               L+ L+P DSA YV
Sbjct: 823  GRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYV 882

Query: 674  LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
            LLSNMYA TG W  R R R++M DR VKKE G SWIEV N  ++F AGD  HP  ++IY 
Sbjct: 883  LLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYE 942

Query: 734  KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
             L +L+    + GY P T+ +L D +   K      HSE+LAIAFGL++  +  P+ + K
Sbjct: 943  YLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFK 1002

Query: 794  NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            NLRVCGDCH  IK +SK+  R IVVRD+ RFHHFK G+CSC DYW
Sbjct: 1003 NLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  307 bits (787), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 192/633 (30%), Positives = 322/633 (50%), Gaps = 28/633 (4%)

Query: 41  RNFVEYNRLL-FEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF--G 97
           + F+E+N  L + Y  D      +N    +   G+     T   +L   GCL    F  G
Sbjct: 30  QKFLEHNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLD--GCLSSGWFSDG 87

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
            ++H + +K GF  +V +   L+DLY+   +++    VFD+M    +  W  +L  +   
Sbjct: 88  WKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAG 147

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           KM  RVL LF RM  E +KP+  T++ VL G    +       ++H   I +G E    V
Sbjct: 148 KMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFV 207

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
           CN LI +Y K+  +  A+ VFDG++ RDS++W +M++G   +    EA   F  M  +G 
Sbjct: 208 CNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGV 267

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
             T   F SV+  C   +  ++  QLH  VLK G   +  +   L+  YS+ G    A +
Sbjct: 268 YPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ 327

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F+ M + +D VS+ ++ISG  Q G  D A+  F +M  + ++P+  T + +L+A  +V 
Sbjct: 328 VFNAMLQ-RDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG 386

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q H++ IK        +  ALL+ YVK   +  A + F   + +++V W+ ML 
Sbjct: 387 ALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLV 446

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            Y  + +   + KI+ Q+  EG++PN+FT+ S++  C++   AV+ G+Q H   +K    
Sbjct: 447 AYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLR-AVDLGEQIHTQVLKTGFQ 505

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             + VSS L+ MY+K G ++ A ++F+R +++D+VSW +MI GYAQH    +AL +FKEM
Sbjct: 506 FNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEM 565

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS-------CMVD 625
           + Q +  D I F   I+AC     +++GQQ         H    +  YS        +V 
Sbjct: 566 QDQGIHSDNIGFASAISACAGIQALNQGQQI--------HAQACVSGYSDDLSVGNALVS 617

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           LY+R G +  A    +++ F+     W ++++ 
Sbjct: 618 LYARCGKVRDAYFAFDKI-FSKDNISWNSLISG 649



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 180/619 (29%), Positives = 320/619 (51%), Gaps = 12/619 (1%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG--- 89
           ++FD  P R    +N++L  +    +    L LF  + +  +     T + VL+ CG   
Sbjct: 124 TVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGD 183

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
             F  V   ++H   +  G+   + V   L+DLY +   +   ++VFD + + + VSW +
Sbjct: 184 VPFHCV--EKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVA 241

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +LSG +++   +  + LF +M   G+ P  + FS+VL             Q+H +V+K G
Sbjct: 242 MLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG 301

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             + T VCNAL+++Y +      A  VF+ M  RD +++NS+++G        +A E F 
Sbjct: 302 FSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFK 361

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M L   +    T  S++  C++   L + +Q HS  +K G+  D  +   L+  Y KC 
Sbjct: 362 KMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCS 421

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++ A + F +  E ++VV W  M+  +     ++ +   F QM  EG+ PN FTY  IL
Sbjct: 422 DIKTAHEFF-LSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSIL 480

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
               ++       Q+H  ++KT ++ +  V + L++ Y K G LD A K+F  + EKD+V
Sbjct: 481 RTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVV 540

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AM+AGYAQ      A+ +++++  +G+  +   F+S I+AC A   A+ QG+Q HA 
Sbjct: 541 SWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISAC-AGIQALNQGQQIHAQ 599

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           +  +  ++ L V +ALV++Y++ G +  A   F +   +D +SWNS+I G+AQ GH ++A
Sbjct: 600 ACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEA 659

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L +F +M +   E +  TF   ++A  +   V  G+Q   +++   H   T E  + ++ 
Sbjct: 660 LSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSET-EVSNVLIT 718

Query: 626 LYSRAGMLEKAMDIINRMP 644
           LY++ G ++ A      MP
Sbjct: 719 LYAKCGNIDDAERQFFEMP 737



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 195/363 (53%), Gaps = 1/363 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K     F  +   N V +N +L  Y       E+  +F  ++  G+     T  S+L+TC
Sbjct: 424 KTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTC 483

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G Q+H + +K+GF  +V VS+ L+D+Y +   ++   ++F  + E +VVSWT
Sbjct: 484 SSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWT 543

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++GYA+++     L LF  MQ +GI  ++  F++ +   A    +    Q+H     +
Sbjct: 544 AMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVS 603

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G     SV NAL+S+Y +   VRDA   FD +  +D+I+WNS+++G+  +    EA   F
Sbjct: 604 GYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLF 663

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + M  AG E+   TF   +   A    ++L +Q+H+ ++K G D +  +   L+  Y+KC
Sbjct: 664 SQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKC 723

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++DA + F  M E K+ +SW AM++G+ Q+G    A++ F  M + GV PN  T+  +
Sbjct: 724 GNIDDAERQFFEMPE-KNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGV 782

Query: 389 LTA 391
           L+A
Sbjct: 783 LSA 785


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 301/843 (35%), Positives = 476/843 (56%), Gaps = 56/843 (6%)

Query: 50  LFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF 109
           ++  C+    +EA+ L   I++ GL +  +T   V++ C        G+ VH +  + G 
Sbjct: 28  VWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGV 87

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
             D+ +  SL++ Y +  +V    +VF  M   +VV+W+S+++ YA N    +  + F R
Sbjct: 88  EIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFER 147

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M    I+PN  TF ++L    +  I+    ++HT+V   G E   +V  ALI+MY K   
Sbjct: 148 MTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGE 207

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           +  A  VF  M +R+ ++W +++     +    EAFE +  M  AG      TFVS++  
Sbjct: 208 ISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNS 267

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C T + L   R++HS + + G++ D  +   L+  Y KC  +++A +IF  M + +DV+S
Sbjct: 268 CNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK-RDVIS 326

Query: 350 WTAMISGHLQNG-----AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
           W+AMI+G+ Q+G     +ID       +M REGV PN  T+  IL A  A        Q+
Sbjct: 327 WSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQI 386

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA----------- 449
           HA + K  +E   S+ TA+ N Y K G + EA +VF  +  K++VAW++           
Sbjct: 387 HAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDL 446

Query: 450 --------------------MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
                               M+AGYAQ GD     ++   + +EG +P+  T  +++ AC
Sbjct: 447 SSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEAC 506

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
            A  A +E+GK  HA ++K  L +   V+++L+ MYSK G +  A  VF +   RD V+W
Sbjct: 507 GAL-AGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAW 565

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           N+M+ GY QHG   +A+++FK M ++ +  + IT   VI+AC+ AGLV EG++ F +M  
Sbjct: 566 NAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQE 625

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------- 660
           +  + P  +HY CMVDL  RAG L++A + I  MP     +VW  +L AC+         
Sbjct: 626 DFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAE 685

Query: 661 -----LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                ++ L+P  +++Y+ LSN+YA  G W +  +VR++M+DR +KK+ G S IE+  + 
Sbjct: 686 RAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRI 745

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLA 775
           ++F+A D +HP+ + I+++LE L+  +K+AGY PD  +VL D+DD  KE  L  HSE+LA
Sbjct: 746 HTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLA 805

Query: 776 IAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           IA+GL+ TP+G P++I+KNLRVCGDCHT  K ISK+ +R+IV RD NRFH+F  G CSCG
Sbjct: 806 IAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCG 865

Query: 836 DYW 838
           D+W
Sbjct: 866 DFW 868



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 88/174 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P RN V +N ++  Y ++    +   L   ++  G      T+ ++L+ CG L
Sbjct: 450 EKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGAL 509

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH E VK G   D  V+TSL+ +Y +   V + R VFD M+  + V+W ++L
Sbjct: 510 AGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAML 569

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +GY ++      ++LF RM  E + PN  T + V+   +  G+V    ++  M+
Sbjct: 570 AGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMM 623


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 312/777 (40%), Positives = 459/777 (59%), Gaps = 60/777 (7%)

Query: 120 VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
           V+LY +       R++  D +E ++VSW++L+SGY +N   +  L  ++ M + G K N 
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 180 FTFSTVL---------------------------GVLADEGIVAT-------------AV 199
           FTFS+VL                           G+  +E  ++T              +
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           +VH  +IK G +      NAL+ MY KS     A AVF  +   D ++WN+++AG V +E
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            +  A +    MG      +  T  S +K CA    ++L RQLHS ++K  ++ D  +  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           GL+  YSKCG ++DA  +F +M   KDV+ W ++ISG+   G    A++ F  M +EG+ 
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLM-PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLE 387

Query: 380 PNGFTYSIIL--TAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N  T S IL  TA    + F  QVH   IK+ Y+    V  +LL++Y K  +L++AAKV
Sbjct: 388 FNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKV 447

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE+   +D+VA+++M+  Y+Q G  E A+K+Y ++    +KP+ F FSS+ NAC A  +A
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNAC-ANLSA 506

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            EQGKQ H   +K  L + +   ++LV MY+K G+I+ AS +F     R +VSW++MI G
Sbjct: 507 YEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGG 566

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            AQHGH +KAL++F +M +  +  + IT + V++AC HAGLV E +++F +M     I P
Sbjct: 567 LAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITP 626

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
           T EHY+CMVD+  R G L++AM ++  MPF ASA VW  +L A R              L
Sbjct: 627 TQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEML 686

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           ++L+P  S  ++LL+N+YA+TG W   A+VR+ M +  VKKE G SWIE+K+K Y+F+ G
Sbjct: 687 LTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVG 746

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP+S +IY KL++L  RL  AGY P     L D++   KE +L  HSE+LA+AFGL+
Sbjct: 747 DRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLI 806

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ATP GAP+++ KNLRVC DCHT  K ISK+  R+I+VRD NRFHHF++G CSCGDYW
Sbjct: 807 ATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 305/827 (36%), Positives = 477/827 (57%), Gaps = 24/827 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC- 90
           + +FD    ++ V +  ++  + ++   +EA++LF  +   G+       SSVL  C   
Sbjct: 167 RKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKI 226

Query: 91  -LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            LFD   G Q+H    K G + +  V  +LV LY R  N     +VF  M   + VS+ S
Sbjct: 227 KLFD--VGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNS 284

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+SG A+   +D  LELF +M+ + +KP+  T +++L   A  G +    Q+H+ VIK G
Sbjct: 285 LISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAG 344

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V  AL+ +Y+    ++ A  +F   +  + + WN M+  +   +   E+F  F 
Sbjct: 345 ISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFR 404

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M + G    + T+ S+++ C +   L L  Q+H+QV+K G  F+  + + L+  Y+K G
Sbjct: 405 QMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHG 464

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           K++ A  I   + E  DVVSWTA+ISG+ Q+     A+  F +M   G++ +   +S  +
Sbjct: 465 KLDTAHVILRTLTE-DDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAI 523

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +A   +       Q+HA    + Y +  S+G AL++ Y + G + EA   FE ID KD +
Sbjct: 524 SACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSI 583

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+ +++G+AQ G  E A+K++ Q+    ++ + FTF S ++A  A  A ++QGKQ HA 
Sbjct: 584 SWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSA-AANIANIKQGKQIHAM 642

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            IK   ++ + VS+AL+T Y+K G+IE A   F    +++ VSWN+MI GY+QHG+  +A
Sbjct: 643 IIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEA 702

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           + +F++M++     + +TF+GV++AC+H GLV +G  YF+ M  EH + P   HY+C+VD
Sbjct: 703 VNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVD 762

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAI 671
           L SRAG L +A   I  MP    AT+WRT+L+AC               L+ L+P DSA 
Sbjct: 763 LISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSAT 822

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLLSNMYA +G W  R + R++M +R VKKE G SWIEVKN  ++F  GD  HP +++I
Sbjct: 823 YVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKI 882

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           Y  L EL+ +  + GY  D   +L D++ E K+  +  HSE+LAI FGL++     P+ +
Sbjct: 883 YEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHV 942

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLRVC DCH+ IK +SK+  R I+VRD  RFHHF+ G+CSC DYW
Sbjct: 943 MKNLRVCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 175/616 (28%), Positives = 312/616 (50%), Gaps = 8/616 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC-GCLF 92
           +F+  P R+   +++++  +    +    L+LF  +    +     + +SVL+ C G   
Sbjct: 67  VFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRI 126

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              +  Q+H   +  G      +S  L+ LY +   +   R+VFD++   + VSW +++S
Sbjct: 127 GIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMIS 186

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G+++N   +  + LF  M   GI P  + FS+VL       +     Q+H +V K G  +
Sbjct: 187 GFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSL 246

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            T VCNAL+++Y +      A  VF  M+ +D +++NS+++G         A E F  M 
Sbjct: 247 ETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMK 306

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               +    T  S++  CA+   L    QLHS V+K GI  D  +   L+  Y  C  ++
Sbjct: 307 RDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIK 366

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A ++F +  + ++VV W  M+    +   +  +   F QM  +G+ PN FTY  IL   
Sbjct: 367 TAHEMF-LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTC 425

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            +V       Q+H  +IKT ++ +  V + L++ Y K G LD A  +   + E D+V+W+
Sbjct: 426 TSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWT 485

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+++GYAQ      A+K ++++ + G++ +   FSS I+AC A   A+ QG+Q HA S  
Sbjct: 486 ALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISAC-AGIQALNQGRQIHAQSYV 544

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           +  +  L + +ALV++Y++ G I+ A   F++   +D +SWN +I G+AQ G+ + AL+V
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKV 604

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F +M R  LE    TF   ++A  +   + +G+Q    M+ +      +E  + ++  Y+
Sbjct: 605 FAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ-IHAMIIKRGFDSDIEVSNALITFYA 663

Query: 629 RAGMLEKAMDIINRMP 644
           + G +E A      MP
Sbjct: 664 KCGSIEDARREFCEMP 679



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 170/551 (30%), Positives = 292/551 (52%), Gaps = 22/551 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++H + +K GF  +  +   LVD+Y    +++   +VF+DM   +V SW  ++SG+   
Sbjct: 30  KKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEK 89

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI-VATAVQVHTMVIKNGGEVVTSV 216
           KM++RVL+LF  M  E + P   +F++VL   +   I +  A Q+H  +I +G      +
Sbjct: 90  KMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPII 149

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N LI +Y K+ ++  AR VFD +  +DS++W +M++G+  N    EA   F  M  AG 
Sbjct: 150 SNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGI 209

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
             T   F SV+  C   K   +  QLH+ V K G   +  +   L+  YS+      A K
Sbjct: 210 FPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEK 269

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +FS M+  KD VS+ ++ISG  Q G  D A+  F +M R+ ++P+  T + +L+A  +  
Sbjct: 270 VFSKMQS-KDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNG 328

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q+H+++IK        V  ALL+ YV    +  A ++F     +++V W+ ML 
Sbjct: 329 ALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLV 388

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            + ++ +   + +I+RQ+  +G+ PN+FT+ S++  CT+   A++ G+Q H   IK    
Sbjct: 389 AFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSV-GALDLGEQIHTQVIKTGFQ 447

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             + V S L+ MY+K G +++A  + +   + D+VSW ++I GYAQH    +AL+ FKEM
Sbjct: 448 FNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEM 507

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS-------CMVD 625
             + ++ D I F   I+AC     +++G+Q         H    +  YS        +V 
Sbjct: 508 LNRGIQSDNIGFSSAISACAGIQALNQGRQI--------HAQSYVSGYSEDLSIGNALVS 559

Query: 626 LYSRAGMLEKA 636
           LY+R G +++A
Sbjct: 560 LYARCGRIKEA 570



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 258/482 (53%), Gaps = 14/482 (2%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M+  GI  N  T+  +L +  + G +    ++H  ++K G    + +CN L+ +Y     
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           +     VF+ M +R   +W+ +++G++  ++     + F+ M       T  +F SV++ 
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 290 CATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           C+  +  +R A Q+H++++ +G+     I   L+  Y+K G +  A K+F  +   KD V
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLC-TKDSV 179

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           SW AMISG  QNG  + A++ FC+M   G+ P  + +S +L+    +  F    Q+HA +
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALV 239

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
            K        V  AL+  Y +      A KVF  +  KD V+++++++G AQ G ++GA+
Sbjct: 240 FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGAL 299

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           +++ ++  + +KP+  T +S+++AC A + A+ +G+Q H+  IKA +++ + V  AL+ +
Sbjct: 300 ELFTKMKRDYLKPDCVTVASLLSAC-ASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y    +I++A E+F   +  ++V WN M+  + +  +  ++  +F++M+ + L  +  T+
Sbjct: 359 YVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTY 418

Query: 585 IGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
             ++  CT  G +D G+Q    ++    + ++Y      S ++D+Y++ G L+ A  I+ 
Sbjct: 419 PSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVC----SVLIDMYAKHGKLDTAHVILR 474

Query: 642 RM 643
            +
Sbjct: 475 TL 476



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 192/363 (52%), Gaps = 1/363 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K    +F  +   N V +N +L  + +     E+  +F  ++  GL     T  S+L+TC
Sbjct: 366 KTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTC 425

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G Q+H + +K+GF  +V V + L+D+Y +   ++    +   + E +VVSWT
Sbjct: 426 TSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWT 485

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +L+SGYA++ +    L+ F  M   GI+ ++  FS+ +   A    +    Q+H     +
Sbjct: 486 ALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS 545

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G     S+ NAL+S+Y +   +++A   F+ ++ +DSI+WN +++G+  +    +A + F
Sbjct: 546 GYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVF 605

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M  A  E +  TF S +   A    ++  +Q+H+ ++K G D D  +   L+  Y+KC
Sbjct: 606 AQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKC 665

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +EDA + F  M E  D VSW AMI+G+ Q+G  + AVN F +M + G  PN  T+  +
Sbjct: 666 GSIEDARREFCEMPEKND-VSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGV 724

Query: 389 LTA 391
           L+A
Sbjct: 725 LSA 727


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 292/830 (35%), Positives = 474/830 (57%), Gaps = 29/830 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTCGC 90
           +FD+  ++N  ++N ++  Y R+ L ++A+++F   + +       F  TL  V+K C  
Sbjct: 56  VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNF--TLPCVIKACAG 113

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G+ +H    K     DV V  +L+ +Y +   VE+  +VF+ M E N+VSW S+
Sbjct: 114 LLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSI 173

Query: 151 LSGYARNKMNDRVLELFHRMQV--EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           + G++ N         F  M V  E   P+  T  TVL V A E  +   + VH + +K 
Sbjct: 174 ICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKL 233

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G      V N+LI MY K + + +A+ +FD  + ++ ++WNSM+ GY   E     F   
Sbjct: 234 GLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLL 293

Query: 269 NNMGLAGAELTRSTF--VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
             M    A++    F  ++V+ +C    EL+  ++LH    ++G+  +  +    + AY+
Sbjct: 294 QKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYT 353

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           +CG +  + ++F +M + K V SW A++ G+ QN     A++ + QMT  G+ P+ FT  
Sbjct: 354 RCGALCSSERVFDLM-DTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIG 412

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L A   +       ++H   ++        +G +LL+ Y+  G    A  +F+ ++ +
Sbjct: 413 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 472

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            +V+W+ M+AGY+Q G  + A+ ++RQ+ S+G++P E     V  AC+  SA +  GK+ 
Sbjct: 473 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA-LRLGKEL 531

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H  ++KA L   + VSS+++ MY+K G I  +  +F R R++D+ SWN +I GY  HG  
Sbjct: 532 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 591

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           K+ALE+F++M R  L+ D  TF G++ AC+HAGLV++G +YF+ M+N H+I P +EHY+C
Sbjct: 592 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 651

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           +VD+  RAG ++ A+ +I  MP    + +W ++L++CR              L+ L+P  
Sbjct: 652 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK 711

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
              YVL+SN++A +G W +  RVR  M D  ++K+AG SWIEV  K ++FL GD   P+ 
Sbjct: 712 PENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPEL 771

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            ++      L  ++   GY PDT  VL D+++E K  IL  HSE+LAI+FGL+ T  G P
Sbjct: 772 EEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLP 831

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +++ KNLR+CGDCH   K ISK+  RDIVVRD  RFHHF++G+CSCGDYW
Sbjct: 832 VRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 293/590 (49%), Gaps = 18/590 (3%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSG--FARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           +  +L+ CG   D   GR++H E V +   F  D  ++T ++ +Y    +  D R VFD 
Sbjct: 1   MGVLLQACGQRKDIEVGRRLH-EMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDK 59

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVAT 197
           +   N+  W +++S Y RN++ +  + +F  +  V   KP++FT   V+   A    +  
Sbjct: 60  LRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGL 119

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
              +H M  K        V NALI+MY K  +V +A  VF+ M +R+ ++WNS++ G+  
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179

Query: 258 NELHMEAFETFNNMGLAGAE---LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           N    E+F  F  M L G E      +T V+V+ +CA  +++     +H   +K G++ +
Sbjct: 180 NGFLQESFNAFREM-LVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             +   L+  YSKC  + +A  +F    + K++VSW +MI G+ +   +        +M 
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFD-KNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQ 297

Query: 375 REGVRPNGFTYSII------LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
            E  +     ++I+      L      S  ++H +  +   + +  V  A + AY + G 
Sbjct: 298 TEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGA 357

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           L  + +VF+L+D K + +W+A+L GYAQ  D   A+ +Y Q+T  G+ P+ FT  S++ A
Sbjct: 358 LCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA 417

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C+    ++  G++ H  +++  L     +  +L+++Y   G   +A  +F     R LVS
Sbjct: 418 CSR-MKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 476

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           WN MI GY+Q+G   +A+ +F++M    ++   I  + V  AC+    +  G++      
Sbjct: 477 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKE-LHCFA 535

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            + H+   +   S ++D+Y++ G +  +  I +R+     A+ W  ++A 
Sbjct: 536 LKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS-WNVIIAG 584



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 224/467 (47%), Gaps = 20/467 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-----GLPLFGSTLSSVLK 86
           Q LFD++ ++N V +N ++  Y R+   ++    F  ++++      +     T+ +VL 
Sbjct: 259 QLLFDKNDKKNIVSWNSMIGGYARE---EDVCRTFYLLQKMQTEDAKMKADEFTILNVLP 315

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C    +    +++H    + G   +  V+ + +  Y R   +    RVFD M+   V S
Sbjct: 316 VCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSS 375

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +LL GYA+N    + L+L+ +M   G+ P+ FT  ++L   +    +    ++H   +
Sbjct: 376 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFAL 435

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           +NG  V   +  +L+S+Y+       A+ +FDGME R  ++WN M+AGY  N L  EA  
Sbjct: 436 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 495

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M   G +      + V   C+    LRL ++LH   LK  +  D  + + ++  Y+
Sbjct: 496 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYA 555

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G +  + +IF  +RE KDV SW  +I+G+  +G    A+  F +M R G++P+ FT++
Sbjct: 556 KGGCIGLSQRIFDRLRE-KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFT 614

Query: 387 IILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-EL 438
            IL A       +  +  F    ++   N E      T +++   + G +D+A ++  E+
Sbjct: 615 GILMACSHAGLVEDGLEYFNQMLNL--HNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEM 672

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSS 484
             + D   WS++L+     G+     K+  +L   E  KP  +   S
Sbjct: 673 PGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLIS 719


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  570 bits (1470), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 286/727 (39%), Positives = 451/727 (62%), Gaps = 30/727 (4%)

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
           G R  D +  S  VS   +L    R K     L + + M ++G +  S  F  +L   A 
Sbjct: 55  GFRKVDTLANSGDVS---ILCKQGRLK---EALGILNTMILQGTRVYSDVFRGLLQECAR 108

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
              +    +VH  ++K+G +    + N L+SMY K   + DAR VFDG+ DR+ ++W +M
Sbjct: 109 LRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAM 168

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +  +V    ++EA++ +  M LAG +  + TFVS++      + L++ +++H ++ K G+
Sbjct: 169 IEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGL 228

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
           + +  + T L+  Y+KCG +  A  IF  + E K+VV+WT +I+G+ Q G +D+A+    
Sbjct: 229 ELEPRVGTSLVGMYAKCGDISKAQVIFDKLPE-KNVVTWTLLIAGYAQQGQVDVALELLE 287

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF------QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           +M +  V PN  TY+ IL  Q   +P       +VH +II++ Y +   V  AL+  Y K
Sbjct: 288 KMQQAEVAPNKITYTSIL--QGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCK 345

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G L EA K+F  +  +D+V W+AM+ GYAQ+G  + A+ ++R++  +G+KP++ TF+S 
Sbjct: 346 CGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSA 405

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + +C++P A +++GK  H   + A  +  + + SALV+MY+K G+++ A  VF +  +R+
Sbjct: 406 LTSCSSP-AFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERN 464

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           +V+W +MI G AQHG  ++ALE F++M++Q ++ D +TF  V++ACTH GLV+EG+++F 
Sbjct: 465 VVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFR 524

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL---- 661
            M  ++ I P +EHYSC VDL  RAG LE+A ++I  MPF    +VW  +L+ACR+    
Sbjct: 525 SMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDV 584

Query: 662 ----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                     + L P D   YV LSN+YAA G +++  +VR++M  R V KE G SWIEV
Sbjct: 585 ERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEV 644

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
             K + F   D SHP++ +IY++L +L+ ++K+ GY PDT +VL D+D+E K   L  HS
Sbjct: 645 DGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHS 704

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           ERLAI +GL+ TP G P++IVKNLRVCGDCHT  K ISK+  R+I+ RD +RFHHF +G+
Sbjct: 705 ERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGV 764

Query: 832 CSCGDYW 838
           CSCGD+W
Sbjct: 765 CSCGDFW 771



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 284/559 (50%), Gaps = 7/559 (1%)

Query: 54  CRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDV 113
           C+    +EAL +   +   G  ++      +L+ C  L     GR+VH   +KSG   + 
Sbjct: 72  CKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNR 131

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
            +  +L+ +Y +  ++ D RRVFD + + N+VSWT+++  +     N    + +  M++ 
Sbjct: 132 YLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLA 191

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G KP+  TF ++L    +  ++    +VH  + K G E+   V  +L+ MY K   +  A
Sbjct: 192 GCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKA 251

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           + +FD + +++ +TW  ++AGY        A E    M  A     + T+ S+++ C T 
Sbjct: 252 QVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTP 311

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L   +++H  ++++G   +  +   L+  Y KCG +++A K+F  +   +DVV+WTAM
Sbjct: 312 LALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH-RDVVTWTAM 370

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY 409
           ++G+ Q G  D A++ F +M ++G++P+  T++  LT+  + +  Q    +H  ++   Y
Sbjct: 371 VTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY 430

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                + +AL++ Y K G +D+A  VF  + E+++VAW+AM+ G AQ G    A++ + Q
Sbjct: 431 SLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQ 490

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +  +G+KP++ TF+SV++ACT      E  K F +  +   +   +   S  V +  + G
Sbjct: 491 MKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAG 550

Query: 530 NIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           ++E A  V      +   S W +++     H   ++     + + + D + DG  ++ + 
Sbjct: 551 HLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDG-AYVALS 609

Query: 589 TACTHAGLVDEGQQYFDIM 607
                AG  ++ ++   +M
Sbjct: 610 NIYAAAGRYEDAEKVRQVM 628



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 164/327 (50%), Gaps = 1/327 (0%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K Q +FD+ P++N V +  L+  Y +      AL L   +++  +     T +S+L+ C 
Sbjct: 250 KAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT 309

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
                  G++VH   ++SG+ R++ V  +L+ +Y +   +++ R++F D+   +VV+WT+
Sbjct: 310 TPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTA 369

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++GYA+   +D  ++LF RMQ +GIKP+  TF++ L   +    +     +H  ++  G
Sbjct: 370 MVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAG 429

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             +   + +AL+SMY K   + DAR VF+ M +R+ + W +M+ G   +    EA E F 
Sbjct: 430 YSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFE 489

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            M   G +  + TF SV+  C     +   R+   S  L  GI       +  +    + 
Sbjct: 490 QMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRA 549

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMIS 355
           G +E+A  +   M        W A++S
Sbjct: 550 GHLEEAENVILTMPFQPGPSVWGALLS 576



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 98/167 (58%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + LF   P R+ V +  ++  Y +   H EA++LF  +++ G+     T +S L +C
Sbjct: 350 KEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSC 409

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+ +H + V +G++ DV + ++LV +Y +  +++D R VF+ M+E NVV+WT
Sbjct: 410 SSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWT 469

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           ++++G A++      LE F +M+ +GIKP+  TF++VL      G+V
Sbjct: 470 AMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLV 516


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  570 bits (1470), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 298/762 (39%), Positives = 453/762 (59%), Gaps = 27/762 (3%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN 160
           H   +K GF  D+ +  +L+++Y+R  +    R++FD+M + N V+W  L+SGY +N M 
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA-TAVQVHTMVIKNG-GEVVTSVCN 218
           +    +   M  EG  PN F F + +    +  +      QVH   I+ G  +   +V N
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            LI+MY K   +  AR+VF  M D+DS++WNSM+ G   N+   +A +++N+M   G   
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           +    +S +  CA+   + L +Q H + +K G+D D ++   L+  Y++  ++ +  K+F
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262

Query: 339 SMMREMKDVVSWTAMISGHLQNGA-IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS- 396
           S M E +D VSW  +I     +GA +  A+  F +M R G  PN  T+  +L    ++S 
Sbjct: 263 SWMLE-RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321

Query: 397 ---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLA 452
                Q+HA I+K N +   ++  ALL  Y K G ++   ++F  + E+ D V+W++M++
Sbjct: 322 SKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GY        A+ +   +   G + + FTF++V++AC A  A +E G + HAC+I+A L 
Sbjct: 382 GYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSAC-ATVATLECGMEVHACAIRACLE 440

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           + + + SALV MYSK G I+ AS  F     R+L SWNSMI GYA+HGH   AL +F  M
Sbjct: 441 SDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM 500

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           +      D ITF+GV++AC+H GLVDEG +YF  M   + + P +EHYSCMVDL  RAG 
Sbjct: 501 KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGE 560

Query: 633 LEKAMDIINRMPFAASATVWRTVLAAC----------------RLISLQPHDSAIYVLLS 676
           L+K  + IN+MP   +  +WRTVL AC                 L ++ P ++  YVLLS
Sbjct: 561 LDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLS 620

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           NMYA+ G W++ AR R+ M +  VKKEAG SW+ +K+  + F+AGD SHP+   IY+KL+
Sbjct: 621 NMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLK 680

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           EL  +++DAGY P   + L D++ E+KE +LS HSE+LA+AF ++   +G P++I+KNLR
Sbjct: 681 ELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLR 739

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VCGDCH+  K ISK+  R IV+RD+NRFHHF++G CSC DYW
Sbjct: 740 VCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 287/544 (52%), Gaps = 15/544 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LP---LFGSTLSSVLKT 87
           + LFD  P RN V +  L+  Y ++ + ++A  +   +   G LP    FGS + +  ++
Sbjct: 55  RKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQES 114

Query: 88  CGCLFDHVFGRQVHCECVKSGFA-RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
              +     GRQVH   +++G     V V   L+++Y +  +++  R VF  M + + VS
Sbjct: 115 ---MLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVS 171

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W S+++G  +NK  +  ++ ++ M+  G+ P++F   + L   A  G +    Q H   I
Sbjct: 172 WNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGI 231

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM-EAF 265
           K G ++  SV N L+++Y ++  + + + VF  M +RD ++WN+++     +   + EA 
Sbjct: 232 KLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAI 291

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E F  M  AG    R TF++++   ++    +L+ Q+H+ +LK  +  D+ I   L+  Y
Sbjct: 292 EVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACY 351

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            K G+ME+  +IFS M E +D VSW +MISG++ N  +  A++    M + G R + FT+
Sbjct: 352 GKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTF 411

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +L+A   V+      +VHA  I+   E    +G+AL++ Y K G +D A++ F L+  
Sbjct: 412 ATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPV 471

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +++ +W++M++GYA+ G  + A++++ ++   G  P+  TF  V++AC+      E  + 
Sbjct: 472 RNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEY 531

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHG 560
           F + +    L   +   S +V +  + G ++     + K   K +++ W +++ G    G
Sbjct: 532 FKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVL-GACCRG 590

Query: 561 HTKK 564
           + +K
Sbjct: 591 NGRK 594



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/564 (25%), Positives = 268/564 (47%), Gaps = 57/564 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F     ++ V +N ++    ++   ++A+  +  +R+ GL      L S L +C  L
Sbjct: 158 RSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASL 217

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              + G+Q H E +K G   DV+VS +L+ LY  T+ + + ++VF  M E + VSW +++
Sbjct: 218 GCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVI 277

Query: 152 SGYARNKMN-DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
              A +  +    +E+F  M   G  PN  TF  +L  ++       + Q+H +++K   
Sbjct: 278 GALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNV 337

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYVTNELHMEAFETFN 269
           +   ++ NAL++ Y KS  + +   +F  M E RD ++WNSM++GY+ NEL  +A +   
Sbjct: 338 KDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVW 397

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G  L   TF +V+  CAT   L    ++H+  ++  ++ D  I + L+  YSKCG
Sbjct: 398 LMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCG 457

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +++ AS+ F++M  ++++ SW +MISG+ ++G  D A+  F +M   G  P+  T+  +L
Sbjct: 458 RIDYASRFFNLM-PVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVL 516

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE-----KDI 444
           +A          +HI                      G++DE  + F+ + E       +
Sbjct: 517 SAC---------SHI----------------------GLVDEGFEYFKSMTEVYGLVPRV 545

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA-AVEQGKQFH 503
             +S M+    + G+ +   KI   +    +KPN   + +V+ AC   +    E G++  
Sbjct: 546 EHYSCMVDLLGRAGELD---KIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAA 602

Query: 504 ACSIKAKLNNALCVSSALVT-MYSKKGNIESASEVFKRQR-----KRDLVSWNSMICGY- 556
                    NA  V+  L++ MY+  G  E  +   +  R     K    SW +M  G  
Sbjct: 603 EMLFNMDPQNA--VNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVH 660

Query: 557 ----AQHGHTKKALEVFKEMRRQD 576
                 + H +K L ++ +++  D
Sbjct: 661 VFVAGDNSHPEKGL-IYAKLKELD 683



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 136/509 (26%), Positives = 221/509 (43%), Gaps = 76/509 (14%)

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
           A   H  VLK+G D D  +   L+  Y + G    A K+F  M + ++ V+W  +ISG+ 
Sbjct: 19  ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPD-RNGVTWACLISGYT 77

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTY-SIILTAQPAV----SPFQVHAHIIKTNY-EKS 412
           QNG  + A     +M  EG  PN F + S I   Q ++       QVH + I+T   +  
Sbjct: 78  QNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAK 137

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            +VG  L+N Y K G +D A  VF L+ +KD V+W++M+ G  Q    E AVK Y  +  
Sbjct: 138 VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
            G+ P+ F   S +++C A    +  G+Q H   IK  L+  + VS+ L+ +Y++   + 
Sbjct: 198 TGLMPSNFALISALSSC-ASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLA 256

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHT-KKALEVFKEMRRQDLEFDGITFIGVITAC 591
              +VF    +RD VSWN++I   A  G +  +A+EVF EM R     + +TFI ++   
Sbjct: 257 ECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATV 316

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           +         Q   +++ ++++       + ++  Y ++G +E   +I +RM        
Sbjct: 317 SSLSTSKLSHQIHALIL-KYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS 375

Query: 652 WR-----------------------------------TVLAACRLIS-----LQPHDSAI 671
           W                                    TVL+AC  ++     ++ H  AI
Sbjct: 376 WNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAI 435

Query: 672 YVLLS----------NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
              L           +MY+  G     +R   LM  R +     YSW        S ++G
Sbjct: 436 RACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNL-----YSW-------NSMISG 483

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPD 750
              H   +        L TR+K +G  PD
Sbjct: 484 YARHGHGDNAL----RLFTRMKLSGQLPD 508


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 297/781 (38%), Positives = 453/781 (58%), Gaps = 24/781 (3%)

Query: 76  LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV 135
           ++GS L S ++   C      G+ +HCE +K G   D+  +  L++ Y++ +++ D  ++
Sbjct: 46  IYGSLLQSCIRNGDC----ATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKL 101

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           FD+M + N VS+ +L+ GY++       + LF R+Q EG + N F FSTVL +L      
Sbjct: 102 FDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWA 161

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
                VH  V K G +    V  ALI  Y        AR VFD +E +D ++W  MVA Y
Sbjct: 162 KLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACY 221

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           V NE   E+ + F+ M + G +    TF SV+K C   +   + + +H    K     + 
Sbjct: 222 VENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            +   L+  Y K G ++DA ++F  M +  DV+ W+ MI+ + Q+   + A+  FC+M R
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPK-DDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
             V PN FT + +L A  ++   Q    +H H++K   + +  V  AL++ Y K G ++ 
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMEN 400

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           + ++F        V+W+ ++ GY Q G+ E A+ +++ +    V+  E T+SSV+ AC A
Sbjct: 401 SLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRAC-A 459

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
             AA+E G Q H+ S+K   +    V +AL+ MY+K GNI+ A  VF   R+ D VSWN+
Sbjct: 460 GIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNA 519

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           MI GY+ HG   +AL+ F+ M   + + D +TF+G+++AC++AGL+D GQ YF  MV E+
Sbjct: 520 MISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEY 579

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------------ 659
            I P  EHY+CMV L  R+G L+KA  +++ +PF  S  VWR +L+AC            
Sbjct: 580 DIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRIS 639

Query: 660 --RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS 717
             R++ ++P D A +VLLSN+YA    W   A +R  M  + ++KE G SWIE + + + 
Sbjct: 640 AQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHY 699

Query: 718 FLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIA 777
           F  GD SHP +  I   LE L+ + ++ GY PD S VL D++D  KE  L  HSERLA+A
Sbjct: 700 FSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALA 759

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           +GL+ TP+ +PL+I+KNLR+C DCH  IKLISK+ +RDI++RD NRFHHF EG+CSCGDY
Sbjct: 760 YGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDY 819

Query: 838 W 838
           W
Sbjct: 820 W 820



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/523 (31%), Positives = 268/523 (51%), Gaps = 14/523 (2%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY K D       LFD  P RN V +  L+  Y +     EA+ LF  ++  G  L    
Sbjct: 88  FYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFV 147

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            S+VLK          G  VH    K GF  D  V T+L+D Y      E  R+VFD + 
Sbjct: 148 FSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIE 207

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             ++VSWT +++ Y  N+  +  L+LF RM++ G KPN+FTF++VL       +      
Sbjct: 208 YKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKA 267

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH    K        V   LI +Y+KS  V DA  VF+ M   D I W+ M+A Y  +E 
Sbjct: 268 VHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQ 327

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA E F  M        + T  S+++ CA+  +L+L  Q+H  V+K G+D +  +   
Sbjct: 328 SEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNA 387

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           LM  Y+KCG+ME++ ++FS      D VSW  +I G++Q G  + A+  F  M    V+ 
Sbjct: 388 LMDMYAKCGRMENSLQLFSESPNCTD-VSWNTVIVGYVQAGNGEKALILFKDMLECQVQG 446

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
              TYS +L A   ++      Q+H+  +KT Y+K+  VG AL++ Y K G + +A  VF
Sbjct: 447 TEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVF 506

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           +++ E D V+W+AM++GY+  G    A+K +  +     KP++ TF  +++AC+  +  +
Sbjct: 507 DMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSN-AGLL 565

Query: 497 EQGKQFHACSIKAKLNNALCVS--SALVTMYSKKGNIESASEV 537
           ++G+ +   S+  + +   C    + +V +  + G+++ A+++
Sbjct: 566 DRGQAYFK-SMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKL 607



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/463 (31%), Positives = 255/463 (55%), Gaps = 7/463 (1%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           N++ + ++L      G  AT   +H  +IK G  +     N L++ Y+K   + DA  +F
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           D M DR+++++ +++ GY       EA   F+ +   G EL    F +V+KL  + +  +
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L   +H+ V K G D D  + T L+  YS CG  E A ++F  + E KD+VSWT M++ +
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAI-EYKDMVSWTGMVACY 221

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSF 413
           ++N   + ++  F +M   G +PN FT++ +L A   +  F     VH    KT+Y +  
Sbjct: 222 VENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            VG  L++ Y+K G +D+A +VFE + + D++ WS M+A YAQ   +E A++++ ++   
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG 341

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            V PN+FT +S++ AC A    ++ G Q H   +K  L+  + VS+AL+ MY+K G +E+
Sbjct: 342 LVLPNQFTLASLLQAC-ASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMEN 400

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           + ++F        VSWN++I GY Q G+ +KAL +FK+M    ++   +T+  V+ AC  
Sbjct: 401 SLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAG 460

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
              ++ G Q   + V   +   T+   + ++D+Y++ G ++ A
Sbjct: 461 IAALEPGSQIHSLSVKTIYDKNTVVG-NALIDMYAKCGNIKDA 502



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 228/454 (50%), Gaps = 8/454 (1%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++  + +FD    ++ V +  ++  Y  +   +E+L LF  +R +G      T +SVLK
Sbjct: 195 YAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLK 254

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L     G+ VH    K+ +  ++ V   L+DLY+++ +V+D  +VF++M + +V+ 
Sbjct: 255 ACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIP 314

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W+ +++ YA+++ ++  +E+F RM+   + PN FT +++L   A    +    Q+H  V+
Sbjct: 315 WSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVV 374

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G ++   V NAL+ MY K   + ++  +F    +   ++WN+++ GYV      +A  
Sbjct: 375 KVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALI 434

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F +M     + T  T+ SV++ CA    L    Q+HS  +K   D +  +   L+  Y+
Sbjct: 435 LFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYA 494

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG ++DA  +F M+RE  D VSW AMISG+  +G    A+  F  M     +P+  T+ 
Sbjct: 495 KCGNIKDARLVFDMLRE-HDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFV 553

Query: 387 IILTAQPAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAK-VFELID 440
            IL+A              K+     + E      T ++    + G LD+AAK V E+  
Sbjct: 554 GILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPF 613

Query: 441 EKDIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSE 473
           E  ++ W A+L+      D E G +   R L  E
Sbjct: 614 EPSVMVWRALLSACVIHNDVELGRISAQRVLEIE 647



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 201/394 (51%), Gaps = 18/394 (4%)

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +  E     + S+++ C    +    + LH +++K G   D      L+  Y K   + D
Sbjct: 38  SSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPD 97

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---- 389
           A+K+F  M + ++ VS+  +I G+ Q      A+  F ++  EG   N F +S +L    
Sbjct: 98  AAKLFDEMPD-RNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLV 156

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           +A+ A   F VHA + K  ++    VGTAL++ Y   G  + A +VF+ I+ KD+V+W+ 
Sbjct: 157 SAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTG 216

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+A Y +    E ++K++ ++   G KPN FTF+SV+ AC         GK  H C+ K 
Sbjct: 217 MVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLE-VFNVGKAVHGCAFKT 275

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
                L V   L+ +Y K G+++ A +VF+   K D++ W+ MI  YAQ   +++A+E+F
Sbjct: 276 SYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMF 335

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVD--EGQQYFDIMVN---EHHIYPTMEHYSCMV 624
             MRR  +  +  T   ++ AC  A LVD   G Q    +V    + +++ +    + ++
Sbjct: 336 CRMRRGLVLPNQFTLASLLQAC--ASLVDLQLGNQIHCHVVKVGLDMNVFVS----NALM 389

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           D+Y++ G +E ++ + +  P     + W TV+  
Sbjct: 390 DMYAKCGRMENSLQLFSESPNCTDVS-WNTVIVG 422


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 282/777 (36%), Positives = 459/777 (59%), Gaps = 20/777 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   + + C  L D   G+QV    ++ G   ++    +L+ LY    NV + R++FD +
Sbjct: 59  TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
               VV+W +L++GYA+         LF +M  EG++P+  TF +VL   +    +    
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           +VH  V+  G      +  AL+SMY+K   + DAR VFDG+  RD  T+N MV GY  + 
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +AFE F  M   G +  + +F+S++  C T + L   + +H+Q +  G+  D  + T
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+ CG +E A ++F  M+ ++DVVSWT MI G+ +NG I+ A   F  M  EG++
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMK-VRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+  TY  I+ A    +      ++H+ +    +     V TAL++ Y K G + +A +V
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQV 417

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ +  +D+V+WSAM+  Y + G    A + +  +    ++P+  T+ +++NAC     A
Sbjct: 418 FDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNAC-GHLGA 476

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++ G + +  +IKA L + + + +AL+ M +K G++E A  +F    +RD+++WN+MI G
Sbjct: 477 LDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGG 536

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y+ HG+ ++AL +F  M ++    + +TF+GV++AC+ AG VDEG+++F  ++    I P
Sbjct: 537 YSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVP 596

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------------- 661
           T++ Y CMVDL  RAG L++A  +I  MP   ++++W ++L ACR+              
Sbjct: 597 TVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERC 656

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + + P+D A+YV LS+MYAA G W+  A+VRK+M  R ++KE G +WIEV  K ++F+  
Sbjct: 657 LMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVE 716

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP   +IY++L  L   +K  GY P T  VL D+ ++ KE  +S HSE+LAIA+G++
Sbjct: 717 DRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVL 776

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + P+G P++I KNLRVC DCH+  K ISK+  R+I+ RD +RFHHFK+G+CSCGDYW
Sbjct: 777 SLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 162/571 (28%), Positives = 288/571 (50%), Gaps = 9/571 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD    +  V +N L+  Y +    +EA  LF  +   GL     T  SVL  C   
Sbjct: 112 RQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSP 171

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +G++VH + V +GF  D  + T+LV +Y++  +++D R+VFD ++  +V ++  ++
Sbjct: 172 AGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMV 231

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GYA++   ++  ELF+RMQ  G+KPN  +F ++L        +A    VH   +  G  
Sbjct: 232 GGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLV 291

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  +LI MY     +  AR VFD M+ RD ++W  M+ GY  N    +AF  F  M
Sbjct: 292 DDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATM 351

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +  R T++ ++  CA +  L  AR++HSQV   G   D  + T L+  Y+KCG +
Sbjct: 352 QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAI 411

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA ++F  M   +DVVSW+AMI  +++NG    A   F  M R  + P+G TY  +L A
Sbjct: 412 KDARQVFDAMPR-RDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNA 470

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       +++   IK +      +G AL+    K G ++ A  +F+ +  +D++ W
Sbjct: 471 CGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITW 530

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AM+ GY+  G+   A+ ++ ++  E  +PN  TF  V++AC+  +  V++G++F    +
Sbjct: 531 NAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSR-AGFVDEGRRFFTYLL 589

Query: 508 KAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKA 565
           + + +   + +   +V +  + G ++ A  + K    +   S W+S++     HG+   A
Sbjct: 590 EGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVA 649

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
               +     D  +DG  ++ +      AG+
Sbjct: 650 ERAAERCLMID-PYDGAVYVQLSHMYAAAGM 679



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 214/385 (55%), Gaps = 7/385 (1%)

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A +    +G  G  +   T+V + + C   ++  L +Q+   +++ G   +      L+ 
Sbjct: 41  ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            YS CG + +A +IF  + E K VV+W A+I+G+ Q G +  A   F QM  EG+ P+  
Sbjct: 101 LYSICGNVTEARQIFDSV-ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSII 159

Query: 384 TYSIILTA--QPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T+  +L A   PA   +  +VHA ++   +   F +GTAL++ YVK G +D+A +VF+ +
Sbjct: 160 TFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGL 219

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             +D+  ++ M+ GYA+ GD E A +++ ++   G+KPN+ +F S+++ C  P  A+  G
Sbjct: 220 HIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPE-ALAWG 278

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K  HA  + A L + + V+++L+ MY+  G+IE A  VF   + RD+VSW  MI GYA++
Sbjct: 279 KAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAEN 338

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G+ + A  +F  M+ + ++ D IT++ ++ AC  +  ++  ++     V+       +  
Sbjct: 339 GNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHS-QVDIAGFGTDLLV 397

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMP 644
            + +V +Y++ G ++ A  + + MP
Sbjct: 398 STALVHMYAKCGAIKDARQVFDAMP 422



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FD  P+R+ V ++ ++  Y  +    EA   F  ++R  +   G T  ++L  C
Sbjct: 412 KDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNAC 471

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L     G +++ + +K+     V +  +L+ +  +  +VE  R +FD M   +V++W 
Sbjct: 472 GHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWN 531

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ GY+ +      L LF RM  E  +PNS TF  VL   +  G V    +  T +++ 
Sbjct: 532 AMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEG 591

Query: 209 GGEVVT 214
            G V T
Sbjct: 592 RGIVPT 597


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 280/696 (40%), Positives = 442/696 (63%), Gaps = 25/696 (3%)

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           L + + M ++G +  S  F  +L   A    +    +VH  ++K+G +    + N L+SM
Sbjct: 32  LGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSM 91

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K   + DAR VFD + DR+ ++W +M+  +V    ++EAF+ +  M LAG +  + TF
Sbjct: 92  YAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTF 151

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           VS++      + L+L +++H ++++ G++ +  + T L+  Y+KCG +  A  IF  + E
Sbjct: 152 VSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPE 211

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----- 398
            K+VV+WT +I+G+ Q G +D+A+     M +  V PN  T++ IL  Q   +P      
Sbjct: 212 -KNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASIL--QGCTTPAALEHG 268

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            +VH +II++ Y +   V  +L+  Y K G L+EA K+F  +  +D+V W+AM+ GYAQ+
Sbjct: 269 KKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQL 328

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G  + A+ ++R++  +G+KP++ TF+SV+ +C++P A +++GK+ H   + A  N  + +
Sbjct: 329 GFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSP-AFLQEGKRIHQQLVHAGYNLDVYL 387

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY-AQHGHTKKALEVFKEMRRQD 576
            SALV+MY+K G+++ AS VF +  +R++V+W ++I G  AQHG  ++ALE F +M++Q 
Sbjct: 388 QSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQG 447

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++ D +TF  V++ACTH GLV+EG+++F  M  ++ I P +EHYSC VDL  RAG LE+A
Sbjct: 448 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 507

Query: 637 MDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAAT 682
            ++I  MPF    +VW  +L+ACR+              + L P D   YV LS++YAA 
Sbjct: 508 ENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAA 567

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G +++  +VR++M  R V KE G SWIEV  K + F   D SHP+S QIY +L +L+ ++
Sbjct: 568 GRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQI 627

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           K+ GY PDT +VL D+D+E KE IL  HSERLAI +GL+ TP G P++IVKNLRVCGDCH
Sbjct: 628 KEMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCH 687

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T  K ISK+  R+I+ RD  RFHHF +G+CSCGD+W
Sbjct: 688 TATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 288/560 (51%), Gaps = 8/560 (1%)

Query: 54  CRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDV 113
           C+    +EAL +   +   G  ++      +L+ C  L     GR+VH   +KSG   + 
Sbjct: 23  CKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNR 82

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
            +  +L+ +Y +  ++ D RRVFD + + N+VSWT+++  +     N    + +  M++ 
Sbjct: 83  YLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLA 142

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G KP+  TF ++L    +  ++    +VH  +++ G E+   V  +L+ MY K   +  A
Sbjct: 143 GCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKA 202

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R +FD + +++ +TW  ++AGY        A E    M  A     + TF S+++ C T 
Sbjct: 203 RVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTP 262

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L   +++H  ++++G   +  +   L+  Y KCG +E+A K+FS +   +DVV+WTAM
Sbjct: 263 AALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPH-RDVVTWTAM 321

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY 409
           ++G+ Q G  D A+N F +M ++G++P+  T++ +LT+  + +  Q    +H  ++   Y
Sbjct: 322 VTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGY 381

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG-YAQIGDTEGAVKIYR 468
                + +AL++ Y K G +D+A+ VF  + E+++VAW+A++ G  AQ G    A++ + 
Sbjct: 382 NLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFD 441

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+  +G+KP++ TF+SV++ACT      E  K F +  +   +   +   S  V +  + 
Sbjct: 442 QMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRA 501

Query: 529 GNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
           G++E A  V          S W +++     H   ++     + + + D + DG  ++ +
Sbjct: 502 GHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDG-AYVAL 560

Query: 588 ITACTHAGLVDEGQQYFDIM 607
            +    AG  ++ ++   +M
Sbjct: 561 SSIYAAAGRYEDAEKVRQVM 580



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 255/516 (49%), Gaps = 35/516 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD    RN V +  ++  +   + + EA   +  ++  G      T  S+L        
Sbjct: 104 VFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPEL 163

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G++VH E V++G   +  V TSLV +Y +  ++   R +FD + E NVV+WT L++G
Sbjct: 164 LQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAG 223

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+    D  LEL   MQ   + PN  TF+++L        +    +VH  +I++G    
Sbjct: 224 YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE 283

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N+LI+MY K   + +AR +F  +  RD +TW +MV GY     H EA   F  M  
Sbjct: 284 LWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQ 343

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +  + TF SV+  C++   L+  +++H Q++  G + D  +++ L+  Y+KCG M+D
Sbjct: 344 QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDD 403

Query: 334 ASKIFSMMREMKDVVSWTAMISGHL-QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           AS +F+ M E ++VV+WTA+I+G   Q+G    A+ +F QM ++G++P+  T++ +L+A 
Sbjct: 404 ASLVFNQMSE-RNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSA- 461

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA-WSAML 451
                   H  +++    K F       + Y+  GI             K +V  +S  +
Sbjct: 462 ------CTHVGLVEEG-RKHFR------SMYLDYGI-------------KPMVEHYSCFV 495

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
               + G  E A  +   + S    P    + ++++AC   S  VE+G++     +K   
Sbjct: 496 DLLGRAGHLEEAENV---ILSMPFIPGPSVWGALLSACRVHS-DVERGERAAENVLKLDP 551

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           ++      AL ++Y+  G  E A +V +   KRD+V
Sbjct: 552 DDD-GAYVALSSIYAAAGRYEDAEKVRQVMEKRDVV 586



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 165/328 (50%), Gaps = 2/328 (0%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + +FDR P++N V +  L+  Y +      AL L   +++  +     T +S+L+ C 
Sbjct: 201 KARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCT 260

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
                  G++VH   ++SG+ R++ V  SL+ +Y +   +E+ R++F D+   +VV+WT+
Sbjct: 261 TPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTA 320

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++GYA+   +D  + LF RMQ +GIKP+  TF++VL   +    +    ++H  ++  G
Sbjct: 321 MVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAG 380

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM-EAFETF 268
             +   + +AL+SMY K   + DA  VF+ M +R+ + W +++ G         EA E F
Sbjct: 381 YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYF 440

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSK 327
           + M   G +  + TF SV+  C     +   R+   S  L  GI       +  +    +
Sbjct: 441 DQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGR 500

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMIS 355
            G +E+A  +   M  +     W A++S
Sbjct: 501 AGHLEEAENVILSMPFIPGPSVWGALLS 528


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/830 (36%), Positives = 479/830 (57%), Gaps = 24/830 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ + +F++   R+ V +  +L  Y R+ L +EA+ L+  +   G+      LSSVL  C
Sbjct: 94  QRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSAC 153

Query: 89  --GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               LF+   GR VH +  K G   +  V  +L+ LY+R  ++    RVF +M   + V+
Sbjct: 154 TKAALFEQ--GRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVT 211

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           + +L+S +A+    +  LE+F  M++ G  P+  T +++L   A  G +    Q+H+ ++
Sbjct: 212 FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLL 271

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G      +  +L+ +Y+K  ++ +A  +F   +  + + WN M+  Y       ++F+
Sbjct: 272 KAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFD 331

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M  AG      T+  +++ C    E+ L  Q+H   +K G + D  +   L+  YS
Sbjct: 332 LFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYS 391

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G ++ A +I  ++ E KDVVSWT+MI+G++Q+     A+  F  M   G+ P+    +
Sbjct: 392 KYGWLDKARRILEVL-EAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLA 450

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             ++A   +       Q+H+ +  + Y    S+  AL+N Y + G   EA  +FE I+ K
Sbjct: 451 SAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHK 510

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D + W+ M++G+AQ G  E A++++ ++   GVK N FTF S I+A +A  A ++QGKQ 
Sbjct: 511 DKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISA-SANLADIKQGKQI 569

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           HA  IK    +   V++AL+++Y K G+IE A   F    +R+ VSWN++I   +QHG  
Sbjct: 570 HATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWG 629

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            +AL++F +M+++ L+ + +TFIGV+ AC+H GLV+EG  YF  M +EH I+P  +HY+C
Sbjct: 630 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYAC 689

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           +VD+  RAG L++A   +  MP +A+A VWRT+L+ACR              L+ L+PHD
Sbjct: 690 VVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHD 749

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           SA YVLLSN YA TG W  R  VRK+M DR V+KE G SWIEVKN  ++F  GD  HP +
Sbjct: 750 SASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLA 809

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
           +QIY  L +L  RL   GY     ++  + + E K+     HSE+LA+AFGL++ P   P
Sbjct: 810 HQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMP 869

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+++KNLRVC DCHT +K  S++  R+IV+RD  RFHHF  G CSCGD+W
Sbjct: 870 LRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 172/568 (30%), Positives = 295/568 (51%), Gaps = 16/568 (2%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H + +  G   D      L+DLY +   V+  RRVF+ ++  + VSW ++LSGYARN +
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
            +  + L+H+M   G+ P  +  S+VL       +      VH  V K G    T V NA
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI++YL+   +  A  VF  M   D +T+N++++ +        A E F  M L+G    
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             T  S++  CA+  +L   +QLHS +LK G+  D+ I   L+  Y KCG + +A +IF 
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF- 398
              +  +VV W  M+  + Q   +  + + FCQM   GVRPN FTY  +L          
Sbjct: 304 -SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN 362

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              Q+H   IKT +E    V   L++ Y K G LD+A ++ E+++ KD+V+W++M+AGY 
Sbjct: 363 LGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYV 422

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q    + A++ ++ +   G+ P+    +S I+AC A   A+ QG+Q H+    +  +  +
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISAC-AGIKAMRQGQQIHSRVYVSGYSADV 481

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            + +ALV +Y++ G  + A  +F+    +D ++WN M+ G+AQ G  ++ALEVF +M + 
Sbjct: 482 SIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQA 541

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            ++++  TF+  I+A  +   + +G+Q    ++       T E  + ++ LY + G +E 
Sbjct: 542 GVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSET-EVANALISLYGKCGSIED 600

Query: 636 AMDIINRMPFAASA----TVWRTVLAAC 659
           A     +M F   +      W T++ +C
Sbjct: 601 A-----KMQFFEMSERNHVSWNTIITSC 623



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 211/427 (49%), Gaps = 15/427 (3%)

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC-ATTKELRL 298
           M  R + + N  + G++ +E   +    F         L    F   ++ C  + K   L
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
              +H++ +  G+  D      L+  Y+K G ++ A ++F  +   +D VSW AM+SG+ 
Sbjct: 61  VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL-SARDNVSWVAMLSGYA 119

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFS 414
           +NG  + AV  + QM   GV P  +  S +L+A    + F+    VHA + K        
Sbjct: 120 RNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV 179

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           VG AL+  Y++ G L  A +VF  +   D V ++ +++ +AQ G+ E A++I+ ++   G
Sbjct: 180 VGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSG 239

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
             P+  T +S++ AC A    + +GKQ H+  +KA ++    +  +L+ +Y K G I  A
Sbjct: 240 WTPDCVTIASLLAAC-ASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEA 298

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            E+FK   + ++V WN M+  Y Q     K+ ++F +M    +  +  T+  ++  CT+A
Sbjct: 299 LEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYA 358

Query: 595 GLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           G ++ G+Q   + +    E  +Y +      ++D+YS+ G L+KA  I+  +  A     
Sbjct: 359 GEINLGEQIHLLSIKTGFESDMYVS----GVLIDMYSKYGWLDKARRILEVLE-AKDVVS 413

Query: 652 WRTVLAA 658
           W +++A 
Sbjct: 414 WTSMIAG 420



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 94/168 (55%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           SK+  SLF+    ++ + +N ++  + +  L++EAL +F+ + + G+     T  S +  
Sbjct: 497 SKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISA 556

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              L D   G+Q+H   +K+G   +  V+ +L+ LY +  ++ED +  F +M+E N VSW
Sbjct: 557 SANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSW 616

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            ++++  +++      L+LF +M+ EG+KPN  TF  VL   +  G+V
Sbjct: 617 NTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 664


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/827 (36%), Positives = 475/827 (57%), Gaps = 23/827 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P +    +N ++  Y  +     +L L+  +R  G+PL   T   +LK CG L
Sbjct: 134 EKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLL 193

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
            D  +G +VH   +K G+   V V+ S+V +Y + N++   R++FD M E  +VVSW S+
Sbjct: 194 KDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 253

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +S Y+ N  +   L LF  MQ   + PN++TF   L    D   +   + +H  V+K+  
Sbjct: 254 ISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY 313

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +   V NALI+MY +   + +A  +F  M+D D+I+WNSM++G+V N L+ EA + ++ 
Sbjct: 314 YINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHE 373

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M  AG +      +S+I   A +       Q+H+  +KNG+D D  +   L+  Y+K   
Sbjct: 374 MRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCS 433

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           M+    IF  M + KDVVSWT +I+GH QNG+   A+  F ++  EG+  +    S IL 
Sbjct: 434 MKYMDCIFDKMPD-KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILL 492

Query: 391 AQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   +    S  ++H++II+        +   +++ Y + G +D AA++FELI+ KD+V+
Sbjct: 493 ACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS 551

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W++M++ Y   G    A++++  +   GV+P+  +  S I +  A  +A+++GK+ H   
Sbjct: 552 WTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVS-ILSAAASLSALKKGKEIHGFL 610

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           I+        ++S LV MY++ G +E +  VF   R +DLV W SMI  Y  HG  + A+
Sbjct: 611 IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAI 670

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++F+ M  + +  D I F+ V+ AC+H+GL++EG+++ + M  E+ + P  EHY+C+VDL
Sbjct: 671 DLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDL 730

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
             RA  LE+A   +  M    +A VW  +L AC              +L+ + P +   Y
Sbjct: 731 LGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNY 790

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VL+SN+Y+A   W++   VR  M    +KK  G SWIEV NK ++F+A D SHPQS +IY
Sbjct: 791 VLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIY 850

Query: 733 SKLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           SKL +++ +L K+ GY   T +VL +  +E K  +L  HSERLAIA+G++ TP GA L+I
Sbjct: 851 SKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRI 910

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVCGDCH   KLISK   R++V+RD NRFHHFK G+CSCGD W
Sbjct: 911 TKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/569 (29%), Positives = 299/569 (52%), Gaps = 16/569 (2%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           SSVL+ CG       G+QVH   + S      V +ST LV +Y +   + D  ++FD M 
Sbjct: 82  SSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP 141

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVAT 197
              + +W +++  Y  N      LEL+  M+V GI  ++ TF  +L   G+L D    A 
Sbjct: 142 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGA- 200

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYV 256
             +VH + IK G   +  V N+++ MY K   +  AR +FD M E  D ++WNSM++ Y 
Sbjct: 201 --EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 258

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           +N   +EA   F  M  A       TFV+ ++ C  +  ++    +H+ VLK+    +  
Sbjct: 259 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 318

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +   L+  Y++ GKM +A+ IF  M +  D +SW +M+SG +QNG    A+ F+ +M   
Sbjct: 319 VANALIAMYARFGKMGEAANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDA 377

Query: 377 GVRPNGFTYSIILTAQP----AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           G +P+      I+ A       +   Q+HA+ +K   +    VG +L++ Y K   +   
Sbjct: 378 GQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYM 437

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
             +F+ + +KD+V+W+ ++AG+AQ G    A++++R++  EG+  +    SS++ AC+  
Sbjct: 438 DCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGL 497

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
              +   K+ H+  I+  L++ L + + +V +Y + GN++ A+ +F+    +D+VSW SM
Sbjct: 498 K-LISSVKEIHSYIIRKGLSD-LVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSM 555

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I  Y  +G   +ALE+F  M+   +E D I+ + +++A      + +G++    ++ +  
Sbjct: 556 ISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 615

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +       S +VD+Y+R G LEK+ ++ N
Sbjct: 616 VLEG-SLASTLVDMYARCGTLEKSRNVFN 643



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 250/487 (51%), Gaps = 30/487 (6%)

Query: 177 PNSFT----FSTVLGVLADEGIVATAVQVHT-MVIKNGGEVVTSVCNALISMYLKSKMVR 231
           P+ F+    +S+VL +   +  ++   QVH  M+  N       +   L+ MY K   + 
Sbjct: 72  PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           DA  +FDGM  +   TWN+M+  YVTN   + + E +  M ++G  L   TF  ++K C 
Sbjct: 132 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 191

Query: 292 TTKELRLARQLHSQVLKNG---IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
             K+ R   ++H   +K G   I F  N   G+   Y+KC  +  A ++F  M E +DVV
Sbjct: 192 LLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGM---YTKCNDLNGARQLFDRMPEKEDVV 248

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           SW +MIS +  NG    A+  F +M +  + PN +T+   L A    S  +    +HA +
Sbjct: 249 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 308

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K++Y  +  V  AL+  Y + G + EAA +F  +D+ D ++W++ML+G+ Q G    A+
Sbjct: 309 LKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEAL 368

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           + Y ++   G KP+     S+I A +A S     G Q HA ++K  L++ L V ++LV M
Sbjct: 369 QFYHEMRDAGQKPDLVAVISII-AASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDM 427

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K  +++    +F +   +D+VSW ++I G+AQ+G   +ALE+F+E++ + ++ D +  
Sbjct: 428 YAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMI 487

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS------CMVDLYSRAGMLEKAMD 638
             ++ AC+   L+          V E H Y   +  S       +VD+Y   G ++ A  
Sbjct: 488 SSILLACSGLKLISS--------VKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAAR 539

Query: 639 IINRMPF 645
           +   + F
Sbjct: 540 MFELIEF 546


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/819 (35%), Positives = 467/819 (57%), Gaps = 22/819 (2%)

Query: 38  SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           SP  N   +N ++     + L  EAL+L+   +R+ L     T  SV+  C  L D    
Sbjct: 134 SPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 193

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H   +  GF  D+ +  +L+D+Y R N+++  R+VF++M   +VVSW SL+SGY  N
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 253

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              +  LE+++R +  G+ P+S+T S+VL      G V     +H ++ K G +    V 
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N L+SMY K   + D R +FD M  RD+++WN+M+ GY    L+ E+ + F  M +   +
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFK 372

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               T  S+++ C    +L   + +H  ++ +G + D      L+  Y+KCG +  + ++
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           FS M+  KD VSW +MI+ ++QNG+ D A+  F +M +  V+P+  TY ++L+    +  
Sbjct: 433 FSGMK-CKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 490

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                ++H  + K  +  +  V   L++ Y K G + ++ KVFE +  +DI+ W+ ++A 
Sbjct: 491 LXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 550

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
                D    +++  ++ +EGV P+  T  S++  C+   AA  QGK+ H C  K  L +
Sbjct: 551 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLL-AAKRQGKEIHGCIFKLGLES 609

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V + L+ MYSK G++ ++ +VFK  + +D+V+W ++I     +G  KKA+  F EM 
Sbjct: 610 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 669

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +  D + F+ +I AC+H+GLV+EG  YF  M  ++ I P +EHY+C+VDL SR+ +L
Sbjct: 670 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALL 729

Query: 634 EKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMY 679
           +KA D I  MP    +++W  +L+ACR+              I L P D+  YVL+SN+Y
Sbjct: 730 DKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVY 789

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           AA G W +   +RK +  R +KK+ G SW+E++NK Y F  G     Q  ++   L  L+
Sbjct: 790 AALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLA 849

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             +   GY  +  +VL DID++ K  IL  HSERLAIAFGL+ T  G PLQ++KNLRVC 
Sbjct: 850 GLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCE 909

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCHTV K ISK+ +R+++VRD NRFH FK+G CSCGDYW
Sbjct: 910 DCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 277/548 (50%), Gaps = 16/548 (2%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + +F+  P R+ V +N L+  Y  +    EAL ++   R LG+     T+SSVL+ CG
Sbjct: 227 KARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACG 286

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G  +H    K G  +DV V+  L+ +Y + N + DGRR+FD M   + VSW +
Sbjct: 287 GLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNT 346

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GY++  + +  ++LF  M V   KP+  T +++L      G +     VH  +I +G
Sbjct: 347 MICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 405

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E  T+  N LI+MY K   +  ++ VF GM+ +DS++WNSM+  Y+ N    EA + F 
Sbjct: 406 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK 465

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M     +    T+V ++ +     +L L ++LH  + K G + +  +   L+  Y+KCG
Sbjct: 466 MMK-TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 524

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +M D+ K+F  M+  +D+++W  +I+  + +   +L +    +M  EGV P+  T   +L
Sbjct: 525 EMGDSLKVFENMKA-RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMAT---ML 580

Query: 390 TAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           +  P  S         ++H  I K   E    VG  L+  Y K G L  + +VF+L+  K
Sbjct: 581 SILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 640

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQ 501
           D+V W+A+++     G+ + AV+ + ++ + G+ P+   F ++I AC+  S  VE+G   
Sbjct: 641 DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH-SGLVEEGLNY 699

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHG 560
           FH      K+   +   + +V + S+   ++ A + +     K D   W +++      G
Sbjct: 700 FHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG 759

Query: 561 HTKKALEV 568
            T+ A  V
Sbjct: 760 DTEIAQRV 767



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 206/424 (48%), Gaps = 29/424 (6%)

Query: 277 ELTRST-FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           E +R T F S+ +  A+        +LHS ++  G+         L+  Y+       + 
Sbjct: 68  ECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSF 127

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F +     +V  W ++I     NG    A++ + +  R  ++P+ +T+  ++ A   +
Sbjct: 128 SVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGL 187

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             F+    +H  ++   +     +G AL++ Y +   LD+A KVFE +  +D+V+W++++
Sbjct: 188 LDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI 247

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +GY   G    A++IY +  + GV P+ +T SSV+ AC     +VE+G   H    K  +
Sbjct: 248 SGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGL-GSVEEGDIIHGLIEKIGI 306

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
              + V++ L++MY K   +     +F +   RD VSWN+MICGY+Q G  ++++++F E
Sbjct: 307 KKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME 366

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M  Q  + D +T   ++ AC H G ++ G+   D M+   +   T    + ++++Y++ G
Sbjct: 367 MVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS-NILINMYAKCG 424

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARV 691
            L  + ++ + M    S + W +++                    N+Y   G + E  ++
Sbjct: 425 NLLASQEVFSGMKCKDSVS-WNSMI--------------------NVYIQNGSFDEAMKL 463

Query: 692 RKLM 695
            K+M
Sbjct: 464 FKMM 467


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 294/823 (35%), Positives = 473/823 (57%), Gaps = 30/823 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +  R+  R+  + ++LL + CR+  HQ+ L+       L    +   L  +++      D
Sbjct: 1   MISRTIVRDSTKLSQLLHQ-CRNIHHQQCLS------ALDSHSYAHMLQQIIRNGA---D 50

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G+ +HC  +K G + D+     L++ Y+++N+++D  ++FD+M ++N +S+ +L  G
Sbjct: 51  PIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQG 110

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y+R+    + L    R+  EG + N F F+T+L +L    +      +H  V K G    
Sbjct: 111 YSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHAD 170

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  ALI  Y     V  AR VFD +  +D ++W  MVA Y  N  + E+ + FN M +
Sbjct: 171 AFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRI 230

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +    T    +K C   +   + + +H   LK   D D  +   L+  Y+K G++ D
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIID 290

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M +  D++ W+ MI+ + Q+     A++ F +M +  V PN FT++ +L A  
Sbjct: 291 AQRLFEEMPK-TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACA 349

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           +        Q+H+ ++K     +  V  A+++ Y K G ++ + K+FE + +++ V W+ 
Sbjct: 350 SSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNT 409

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++ GY Q+GD E A+ ++  +    ++P E T+SSV+ A +A  AA+E G Q H+ +IK 
Sbjct: 410 IIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRA-SASLAALEPGLQIHSLTIKT 468

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             N    V+++L+ MY+K G I  A   F +  KRD VSWN+MICGY+ HG + +AL +F
Sbjct: 469 MYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLF 528

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             M+  D + + +TF+GV++AC++AGL+ +GQ +F+ M  ++ I P +EHY+CMV L  R
Sbjct: 529 DMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGR 588

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLL 675
            G  ++AM +I  + +  S  VWR +L AC               ++ ++PHD A +VLL
Sbjct: 589 LGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLL 648

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SNMYA  G W   A VRK M  +KV+KE G SW+E +   + F  GD SHP    I + L
Sbjct: 649 SNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAML 708

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           E L+ + +DAGY PD + VL D+ D+ KE  L  HSERLA+A+GL+ TP    ++I+KNL
Sbjct: 709 EWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNL 768

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+C DCHTV+KLISK+ +R+IV+RD NRFHHF+ G+CSCGDYW
Sbjct: 769 RICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 171/337 (50%), Gaps = 3/337 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF+  P+ + + ++ ++  Y +    +EAL+LFL +R+  +     T +SVL+ C   
Sbjct: 292 QRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASS 351

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +K G   +V VS +++D+Y +   +E+  ++F+++ + N V+W +++
Sbjct: 352 VSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTII 411

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY +    +R + LF  M    ++P   T+S+VL   A    +   +Q+H++ IK    
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T V N+LI MY K   + DAR  FD M  RD ++WN+M+ GY  + + MEA   F+ M
Sbjct: 472 KDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMM 531

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKCG 329
                +  + TFV V+  C+    L    Q H + +    D    I   T ++    + G
Sbjct: 532 QHTDCKPNKLTFVGVLSACSNAG-LLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLG 590

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           + ++A K+   +     V+ W A++   + +  +DL 
Sbjct: 591 RFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLG 627


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 292/819 (35%), Positives = 467/819 (57%), Gaps = 22/819 (2%)

Query: 38  SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           SP  N   +N ++     + L  EAL+L+   +R+ L     T  SV+  C  L D    
Sbjct: 75  SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H   +  GF  D+ +  +L+D+Y R N+++  R+VF++M   +VVSW SL+SGY  N
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              +  LE+++R +  G+ P+S+T S+VL      G V     +H ++ K G +    V 
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N L+SMY K   + D R +FD M  RD+++WN+M+ GY    L+ E+ + F  M +   +
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFK 313

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               T  S+++ C    +L   + +H  ++ +G + D      L+  Y+KCG +  + ++
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           FS M+  KD VSW +MI+ ++QNG+ D A+  F +M +  V+P+  TY ++L+    +  
Sbjct: 374 FSGMK-CKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGD 431

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                ++H  + K  +  +  V   L++ Y K G + ++ KVFE +  +DI+ W+ ++A 
Sbjct: 432 LHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 491

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
                D    +++  ++ +EGV P+  T  S++  C+   AA  QGK+ H C  K  L +
Sbjct: 492 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLL-AAKRQGKEIHGCIFKLGLES 550

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V + L+ MYSK G++ ++ +VFK  + +D+V+W ++I     +G  KKA+  F EM 
Sbjct: 551 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 610

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +  D + F+ +I AC+H+GLV+EG  YF  M  ++ I P +EHY+C+VDL SR+ +L
Sbjct: 611 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALL 670

Query: 634 EKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMY 679
           +KA D I  MP    +++W  +L+ACR+              I L P D+  YVL+SN+Y
Sbjct: 671 DKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIY 730

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           AA G W +   +RK +  R +KK+ G SW+E++NK Y F  G     Q  ++   L  L+
Sbjct: 731 AALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLA 790

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             +   GY  +  +VL DID++ K  IL  HSERLAIAFGL+ T  G PLQ++KNLRVC 
Sbjct: 791 GLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCE 850

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCHTV K ISK+ +R+++VRD NRFH FK+G CSCGDYW
Sbjct: 851 DCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 277/548 (50%), Gaps = 16/548 (2%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + +F+  P R+ V +N L+  Y  +    EAL ++   R LG+     T+SSVL+ CG
Sbjct: 168 KARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACG 227

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G  +H    K G  +DV V+  L+ +Y + N + DGRR+FD M   + VSW +
Sbjct: 228 GLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNT 287

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GY++  + +  ++LF  M V   KP+  T +++L      G +     VH  +I +G
Sbjct: 288 MICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 346

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E  T+  N LI+MY K   +  ++ VF GM+ +DS++WNSM+  Y+ N    EA + F 
Sbjct: 347 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK 406

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M     +    T+V ++ +     +L L ++LH  + K G + +  +   L+  Y+KCG
Sbjct: 407 MMK-TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 465

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +M D+ K+F  M+  +D+++W  +I+  + +   +L +    +M  EGV P+  T   +L
Sbjct: 466 EMGDSLKVFENMKA-RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMAT---ML 521

Query: 390 TAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           +  P  S         ++H  I K   E    VG  L+  Y K G L  + +VF+L+  K
Sbjct: 522 SILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK 581

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQ 501
           D+V W+A+++     G+ + AV+ + ++ + G+ P+   F ++I AC+  S  VE+G   
Sbjct: 582 DVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH-SGLVEEGLNY 640

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHG 560
           FH      K+   +   + +V + S+   ++ A + +     K D   W +++      G
Sbjct: 641 FHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG 700

Query: 561 HTKKALEV 568
            T+ A  V
Sbjct: 701 DTEIAERV 708



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 207/427 (48%), Gaps = 35/427 (8%)

Query: 277 ELTRSTFVSVIKLC----ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           E +R T  S I       ATT +L    +LHS ++  G+         L+  Y+      
Sbjct: 9   ECSRQTLFSSISRALASAATTTQLH---KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPT 65

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            +  +F +     +V  W ++I     NG    A++ + +  R  ++P+ +T+  ++ A 
Sbjct: 66  SSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC 125

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +  F+    +H  ++   +     +G AL++ Y +   LD+A KVFE +  +D+V+W+
Sbjct: 126 AGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWN 185

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           ++++GY   G    A++IY +  + GV P+ +T SSV+ AC     +VE+G   H    K
Sbjct: 186 SLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGL-GSVEEGDIIHGLIEK 244

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             +   + V++ L++MY K   +     +F +   RD VSWN+MICGY+Q G  ++++++
Sbjct: 245 IGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKL 304

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F EM  Q  + D +T   ++ AC H G ++ G+   D M+   +   T    + ++++Y+
Sbjct: 305 FMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS-NILINMYA 362

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQER 688
           + G L  + ++ + M    S + W +++                    N+Y   G + E 
Sbjct: 363 KCGNLLASQEVFSGMKCKDSVS-WNSMI--------------------NVYIQNGSFDEA 401

Query: 689 ARVRKLM 695
            ++ K+M
Sbjct: 402 MKLFKMM 408


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/827 (36%), Positives = 473/827 (57%), Gaps = 23/827 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P +    +N ++  Y  +     +L L+  +R  G+PL   T   +LK CG L
Sbjct: 170 EKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLL 229

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
            D   G +VH   +K G+   V V+ S+V +Y + N++   R++FD M E  +VVSW S+
Sbjct: 230 KDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 289

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +S Y+ N  +   L LF  MQ   + PN++TF   L    D   +   + +H  V+K+  
Sbjct: 290 ISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY 349

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +   V NALI+MY +   + +A  +F  M+D D+I+WNSM++G+V N L+ EA + ++ 
Sbjct: 350 YINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHE 409

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M  AG +      +S+I   A +       Q+H+  +KNG+D D  +   L+  Y+K   
Sbjct: 410 MRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCS 469

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           M+    IF  M + KDVVSWT +I+GH QNG+   A+  F ++  EG+  +    S IL 
Sbjct: 470 MKYMDCIFDKMPD-KDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILL 528

Query: 391 AQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   +    S  ++H++II+        +   +++ Y + G +D AA++FELI+ KD+V+
Sbjct: 529 ACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS 587

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W++M++ Y   G    A++++  +   GV+P+  +  S I +  A  +A+++GK+ H   
Sbjct: 588 WTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVS-ILSAAASLSALKKGKEIHGFL 646

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           I+        ++S LV MY++ G +E +  VF   R +DLV W SMI  Y  HG  + A+
Sbjct: 647 IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAI 706

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++F+ M  + +  D I F+ V+ AC+H+GL++EG+++ + M  E+ + P  EHY C+VDL
Sbjct: 707 DLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDL 766

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
             RA  LE+A   +  M    +A VW  +L AC              +L+ + P +   Y
Sbjct: 767 LGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNY 826

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VL+SN+YAA   W++   VR  M    +KK  G SWIEV NK ++F+A D SHPQS +IY
Sbjct: 827 VLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIY 886

Query: 733 SKLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           SKL +++ +L K+ GY   T +VL +  +E K  +L  HSERLAIA+G++ TP GA L+I
Sbjct: 887 SKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRI 946

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVCGDCH   KLISK   R++V+RD NRFHHFK G+CSCGD W
Sbjct: 947 TKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 165/569 (28%), Positives = 299/569 (52%), Gaps = 16/569 (2%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           SSVL+ CG       G+QVH   + S      V +ST LV +Y +   + D  ++FD M 
Sbjct: 118 SSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMP 177

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVAT 197
              + +W +++  Y  N      LEL+  M+V GI  ++ TF  +L   G+L D      
Sbjct: 178 HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDR---RC 234

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYV 256
             +VH + IK G   +  V N+++ MY K   +  AR +FD M E  D ++WNSM++ Y 
Sbjct: 235 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYS 294

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           +N   +EA   F  M  A       TFV+ ++ C  +  ++    +H+ VLK+    +  
Sbjct: 295 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 354

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +   L+  Y++ GKM +A+ IF  M +  D +SW +M+SG +QNG    A+ F+ +M   
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDA 413

Query: 377 GVRPNGFTYSIILTAQP----AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           G +P+      I+ A       ++  Q+HA+ +K   +    VG +L++ Y K   +   
Sbjct: 414 GQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYM 473

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
             +F+ + +KD+V+W+ ++AG+AQ G    A++++R++  EG+  +    SS++ AC+  
Sbjct: 474 DCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGL 533

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
              +   K+ H+  I+  L++ L + + +V +Y + GN++ A+ +F+    +D+VSW SM
Sbjct: 534 K-LISSVKEIHSYIIRKGLSD-LVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSM 591

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I  Y  +G   +ALE+F  M+   +E D I+ + +++A      + +G++    ++ +  
Sbjct: 592 ISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGF 651

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +       S +VD+Y+R G LEK+ ++ N
Sbjct: 652 VLEG-SLASTLVDMYARCGTLEKSRNVFN 679



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 145/487 (29%), Positives = 250/487 (51%), Gaps = 30/487 (6%)

Query: 177 PNSFT----FSTVLGVLADEGIVATAVQVHT-MVIKNGGEVVTSVCNALISMYLKSKMVR 231
           P+ F+    +S+VL +   +  ++   QVH  M+  N       +   L+ MY K   + 
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           DA  +FDGM  +   TWN+M+  YVTN   + + E +  M ++G  L   TF  ++K C 
Sbjct: 168 DAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACG 227

Query: 292 TTKELRLARQLHSQVLKNG---IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
             K+ R   ++H   +K G   I F  N   G+   Y+KC  +  A ++F  M E +DVV
Sbjct: 228 LLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGM---YTKCNDLNGARQLFDRMPEKEDVV 284

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           SW +MIS +  NG    A+  F +M +  + PN +T+   L A    S  +    +HA +
Sbjct: 285 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATV 344

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K++Y  +  V  AL+  Y + G + EAA +F  +D+ D ++W++ML+G+ Q G    A+
Sbjct: 345 LKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEAL 404

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           + Y ++   G KP+     S+I A +A S     G Q HA ++K  L++ L V ++LV M
Sbjct: 405 QFYHEMRDAGQKPDLVAVISII-AASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDM 463

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K  +++    +F +   +D+VSW ++I G+AQ+G   +ALE+F+E++ + ++ D +  
Sbjct: 464 YAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMI 523

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS------CMVDLYSRAGMLEKAMD 638
             ++ AC+   L+          V E H Y   +  S       +VD+Y   G ++ A  
Sbjct: 524 SSILLACSGLKLISS--------VKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAAR 575

Query: 639 IINRMPF 645
           +   + F
Sbjct: 576 MFELIEF 582


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/827 (36%), Positives = 471/827 (56%), Gaps = 24/827 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--G 89
           + +F     R+ V +  +L  Y +  L +EA  L+  +    +      LSSVL  C  G
Sbjct: 98  RQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKG 157

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            LF    GR +H +  K  F  +  V  +L+ LY+   + +   RVF DM   + V++ +
Sbjct: 158 KLFAQ--GRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNT 215

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+SG+A+    +  L++F  MQ+ G++P+  T +++L   A  G +    Q+H+ ++K G
Sbjct: 216 LISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAG 275

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                    +L+ +Y+K   +  A  +F+  +  + + WN M+  Y       ++FE F 
Sbjct: 276 MSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFG 335

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G    + T+  +++ C  T ++ L  Q+HS  +KNG + D  +   L+  YSK  
Sbjct: 336 QMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYR 395

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++ A KI  M+ E +DVVSWT+MI+G++Q+   + A+  F +M   GV P+    +   
Sbjct: 396 CLDKARKILEML-EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454

Query: 390 TAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +A   +       Q+HA +  + Y    S+   L+N Y + G  +EA  +F  ID KD +
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEI 514

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+ +++G+ Q    E A+ ++ +++  G K N FTF S I+A  A  A ++QGKQ H  
Sbjct: 515 TWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISA-LANLADIKQGKQVHGR 573

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           ++K    +   V++AL+++Y K G+IE A  +F     R+ VSWN++I   +QHG   +A
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L++F +M+++ L+ + +TFIGV+ AC+H GLV+EG  YF  M N + + P  +HY+C+VD
Sbjct: 634 LDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVD 693

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           +  RAG L++A   ++ MP  A+A +WRT+L+AC+              L+ L+PHDSA 
Sbjct: 694 ILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSAS 753

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLLSN YA TG W  R +VRK+M DR ++KE G SWIEVKN  ++F  GD  HP S+QI
Sbjct: 754 YVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQI 813

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           Y  L EL+ RL   GYK +   +  + + E K+     HSE+LA+AFGL+  P   PL++
Sbjct: 814 YKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRV 873

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLRVC DCH+ +K  S++ RR+IV+RD  RFHHF  G CSCGDYW
Sbjct: 874 IKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  278 bits (712), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 168/566 (29%), Positives = 285/566 (50%), Gaps = 10/566 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H   V  G   D  +   L+DLY +   V   R+VF +++  + VSW ++LSGYA+  
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +      L+ +M    + P  +  S+VL       + A    +H  V K      T V N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI++YL     + A  VF  M   D +T+N++++G+        A + F+ M L+G   
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T  S++  CA+  +L+  +QLHS +LK G+ FD+     L+  Y KCG +E A  IF
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL-----TAQP 393
           + + +  +VV W  M+  + Q   +  +   F QM   G+ PN FTY  IL     T Q 
Sbjct: 304 N-LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            +   Q+H+  IK  +E    V   L++ Y K   LD+A K+ E+++++D+V+W++M+AG
Sbjct: 363 ELGE-QIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAG 421

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    E A+  ++++   GV P+    +S  +AC A   A+ QG Q HA    +    
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASAC-AGIKAMRQGLQIHARVYVSGYAA 480

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + + + LV +Y++ G  E A  +F+    +D ++WN +I G+ Q    ++AL VF +M 
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMS 540

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           +   +++  TFI  I+A  +   + +G+Q     V   H   T E  + ++ LY + G +
Sbjct: 541 QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSET-EVANALISLYGKCGSI 599

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC 659
           E A  I + M      + W T++ +C
Sbjct: 600 EDAKMIFSEMSLRNEVS-WNTIITSC 624



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 228/450 (50%), Gaps = 9/450 (2%)

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +++H   +  G      + N LI +Y K+ +V  AR VF  +  RD ++W +M++GY   
Sbjct: 63  LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            L  EAF  ++ M       T     SV+  C   K     R +H+QV K     +  + 
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y   G  + A ++F  M    D V++  +ISGH Q G  + A+  F +M   G+
Sbjct: 183 NALIALYLGFGSFKLAERVFCDML-FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           RP+  T + +L A  +V       Q+H++++K      +    +LL+ YVK G ++ A  
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F L D  ++V W+ ML  Y QI D   + +I+ Q+ + G+ PN+FT+  ++  CT  + 
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTC-TG 360

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +E G+Q H+ SIK    + + VS  L+ MYSK   ++ A ++ +   KRD+VSW SMI 
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIA 420

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHI 613
           GY QH   ++AL  FKEM+   +  D I      +AC     + +G Q +  + V+ +  
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY-- 478

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
              +  ++ +V+LY+R G  E+A  +   +
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREI 508



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 179/350 (51%), Gaps = 7/350 (2%)

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L  ++H+  +  G+  D  I   L+  Y+K G +  A ++F  +   +D VSW AM+SG+
Sbjct: 61  LVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS-RDHVSWVAMLSGY 119

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSF 413
            Q G    A   + QM    V P  +  S +L+A      F     +HA + K  +    
Sbjct: 120 AQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSET 179

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            VG AL+  Y+  G    A +VF  +   D V ++ +++G+AQ G  E A++I+ ++   
Sbjct: 180 FVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLS 239

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G++P+  T +S++ AC A    +++GKQ H+  +KA ++       +L+ +Y K G+IE+
Sbjct: 240 GLRPDCVTVASLLAAC-ASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A ++F    + ++V WN M+  Y Q     K+ E+F +M+   +  +  T+  ++  CT 
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTC 358

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            G ++ G+Q   + + ++     M     ++D+YS+   L+KA  I+  +
Sbjct: 359 TGQIELGEQIHSLSI-KNGFESDMYVSGVLIDMYSKYRCLDKARKILEML 407



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 134/262 (51%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + + +   +R+ V +  ++  Y +    +EAL  F  ++  G+      L+S    C 
Sbjct: 399 KARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACA 458

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            +     G Q+H     SG+A D+++  +LV+LY R    E+   +F +++  + ++W  
Sbjct: 459 GIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNG 518

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+SG+ ++++ ++ L +F +M   G K N FTF + +  LA+   +    QVH   +K G
Sbjct: 519 LISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTG 578

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
               T V NALIS+Y K   + DA+ +F  M  R+ ++WN+++     +   +EA + F+
Sbjct: 579 HTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFD 638

Query: 270 NMGLAGAELTRSTFVSVIKLCA 291
            M   G +    TF+ V+  C+
Sbjct: 639 QMKQEGLKPNDVTFIGVLAACS 660



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 92/168 (54%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S++  SLF     ++ + +N L+  + +  L+++AL +F+ + + G      T  S +  
Sbjct: 498 SEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISA 557

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              L D   G+QVH   VK+G   +  V+ +L+ LY +  ++ED + +F +M+  N VSW
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSW 617

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            ++++  +++      L+LF +M+ EG+KPN  TF  VL   +  G+V
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 298/787 (37%), Positives = 466/787 (59%), Gaps = 33/787 (4%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T S  LK C        G  VH +  +S    D     SL+ LY +    E    +F  M
Sbjct: 68  TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLM 127

Query: 140 NES-NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
             S +++SW++++S +A N M  R L  F  M   G  PN + F+      +    V+  
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187

Query: 199 VQVHTMVIKNGGEVVTSVC--NALISMYLKSKM-VRDARAVFDGMEDRDSITWNSMVAGY 255
             +   V+K G  + + VC    LI M++K +  +  A  VF+ M +R+++TW  M+   
Sbjct: 188 DSIFGFVVKTG-YLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL 246

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           +      EA + F  M L+G E  R T   VI  CA  + L L +QLHSQ +++G+  D 
Sbjct: 247 MQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306

Query: 316 NIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNFFC 371
            +   L+  Y+KC   G M  A KIF  + +  +V SWTAMI+G++Q G  D  A++ F 
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILD-HNVFSWTAMITGYVQKGGYDEEALDLFR 365

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
            M    V PN FT+S  L A   ++      QV  H +K  +     V  +L++ Y + G
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +D+A K F+++ EK++++++ ++  YA+  ++E A++++ ++  +G+  + FTF+S+++
Sbjct: 426 RIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLS 485

Query: 488 ACTAPSAAVEQGKQFHACSIKA--KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
              A    + +G+Q HA  IK+  KLN ++C  +AL++MYS+ GNIESA +VF+    R+
Sbjct: 486 G-AASIGTIGKGEQIHARVIKSGLKLNQSVC--NALISMYSRCGNIESAFQVFEDMEDRN 542

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           ++SW S+I G+A+HG   +ALE+F +M  + +  + +T+I V++AC+H GLV+EG ++F 
Sbjct: 543 VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFK 602

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----- 660
            M  EH + P MEHY+CMVD+  R+G L +A+  IN MP+ A A VWRT L ACR     
Sbjct: 603 SMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNL 662

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    +I  +PHD A Y+LLSN+YA+T  W E + +RK M ++ + KEAG SW+EV
Sbjct: 663 ELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEV 722

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           +NK + F  GD SHP++ +IY +L+ LS ++K  GY P+  +VL D+++E KE +L QHS
Sbjct: 723 ENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHS 782

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E++A+AFGL++T    P+++ KNLR+CGDCH+ IK IS    R+I+VRD NRFHH K+G 
Sbjct: 783 EKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGR 842

Query: 832 CSCGDYW 838
           CSC +YW
Sbjct: 843 CSCNEYW 849


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 299/801 (37%), Positives = 475/801 (59%), Gaps = 37/801 (4%)

Query: 68  GIRRLGL----PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY 123
            I RL L    PL  S+L  +LK C    +   G+ +H + + SG   D  +  SL+ LY
Sbjct: 27  AISRLDLTTTSPLIKSSL--LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLY 84

Query: 124 MRTNNVEDGRRVFDDM--NESNVVSWTSLLSGYARNKMNDRVLELF-HRMQVEG--IKPN 178
            +  + E+   +F +M  ++ ++VSW++++S +A N M  R L  F H +Q     I PN
Sbjct: 85  SKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPN 144

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC--NALISMYLKSKM-VRDARA 235
            + F+ +L   ++     T + +   ++K G    + VC   ALI M+ K  + ++ AR 
Sbjct: 145 EYCFTALLRSCSNPLFFTTGLAIFAFLLKTG-YFDSHVCVGCALIDMFTKGGLDIQSARM 203

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           VFD M+ ++ +TW  M+  Y    L  +A + F  + ++     + T  S++  C   + 
Sbjct: 204 VFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEF 263

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             L +QLHS V+++G+  D  +   L+  Y+K   +E++ KIF+ M    +V+SWTA+IS
Sbjct: 264 FSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLH-HNVMSWTALIS 322

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
           G++Q+     A+  FC M    V PN FT+S +L A  ++  F    Q+H   IK     
Sbjct: 323 GYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLST 382

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              VG +L+N Y + G ++ A K F ++ EK++++++      A+  D++ +     ++ 
Sbjct: 383 INCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVE 440

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
             GV  + FT++ +++   A    + +G+Q HA  +K+     LC+++AL++MYSK GN 
Sbjct: 441 HTGVGASPFTYACLLSG-AACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNK 499

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           E+A +VF     R++++W S+I G+A+HG   KALE+F EM    ++ + +T+I V++AC
Sbjct: 500 EAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSAC 559

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           +H GL+DE  ++F+ M   H I P MEHY+CMVDL  R+G+L +A++ IN MPF A A V
Sbjct: 560 SHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALV 619

Query: 652 WRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
           WRT L +CR              ++  +PHD A Y+LLSN+YA+ G W + A +RK M  
Sbjct: 620 WRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQ 679

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
           +K+ KE GYSWIEV N+ + F  GD SHPQ+ +IY +L+EL+ ++K+ GY P+T +VL D
Sbjct: 680 KKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHD 739

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           ++DE KE  L QHSE++A+A+ L++TP   P+++ KNLRVCGDCHT IK IS +  R+IV
Sbjct: 740 VEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIV 799

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           VRD NRFHH K+G CSC DYW
Sbjct: 800 VRDANRFHHIKDGKCSCNDYW 820



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 217/426 (50%), Gaps = 11/426 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+   +N V +  ++  Y +  L  +A++LF  +          TL+S+L  C  L  
Sbjct: 204 VFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEF 263

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   ++SG A DV V  +LVD+Y ++  VE+ R++F+ M   NV+SWT+L+SG
Sbjct: 264 FSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISG 323

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y +++     ++LF  M    + PN FTFS+VL   A         Q+H   IK G   +
Sbjct: 324 YVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTI 383

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN-MG 272
             V N+LI+MY +S  +  AR  F+ + +++ I++N+       N   +++ E+FN+ + 
Sbjct: 384 NCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADA---NAKALDSDESFNHEVE 440

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G   +  T+  ++   A    +    Q+H+ ++K+G   +  I   L+  YSKCG  E
Sbjct: 441 HTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKE 500

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A ++F+ M   ++V++WT++ISG  ++G    A+  F +M   GV+PN  TY  +L+A 
Sbjct: 501 AALQVFNDM-GYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSAC 559

Query: 393 PAVSPF-QVHAHIIKTNYEKSFSVG----TALLNAYVKKGILDEAAKVFELID-EKDIVA 446
             V    +   H    +Y  S S        +++   + G+L EA +    +  + D + 
Sbjct: 560 SHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALV 619

Query: 447 WSAMLA 452
           W   L 
Sbjct: 620 WRTFLG 625


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 297/827 (35%), Positives = 471/827 (56%), Gaps = 24/827 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--G 89
           + +F     R+ V +  +L  Y +  L +EA  L+  +    +      LSSVL  C  G
Sbjct: 98  RQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKG 157

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            LF    GR +H +  K  F  +  V  +L+ LY+   + +   RVF DM   + V++ +
Sbjct: 158 KLFAQ--GRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNT 215

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+SG+A+    +  L++F  MQ+ G++P+  T +++L   A  G +    Q+H+ ++K G
Sbjct: 216 LISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAG 275

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                    +L+ +Y+K   +  A  +F+  +  + + WN M+  Y       ++FE F 
Sbjct: 276 MSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFG 335

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G    + T+  +++ C  T ++ L  Q+HS  +KNG + D  +   L+  YSK G
Sbjct: 336 QMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYG 395

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++ A KI  M+ E +DVVSWT+MI+G++Q+   + A+  F +M   GV P+    +   
Sbjct: 396 CLDKARKILEML-EKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAA 454

Query: 390 TAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +A   +       Q+HA +  + Y    S+   L+N Y + G  +EA  +F  I+ KD +
Sbjct: 455 SACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEI 514

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+ +++G+ Q    + A+ ++ ++   G K N FTF S I+A  A  A ++QGKQ H  
Sbjct: 515 TWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA-LANLADIKQGKQVHGR 573

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           ++K    +   V++AL+++Y K G+IE A  +F     R+ VSWN++I   +QHG   +A
Sbjct: 574 AVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEA 633

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L++F +M+++ L+ + +TFIGV+ AC+H GLV+EG  YF  M N + + P  +HY+C+VD
Sbjct: 634 LDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVD 693

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           +  RAG L++A   ++ MP  A+A +WRT+L+AC+              L+ L+PHDSA 
Sbjct: 694 ILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSAS 753

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLLSN YA TG W  R +VRK+M DR ++KE G SWIEVKN  ++F  GD  HP S+QI
Sbjct: 754 YVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQI 813

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           Y  L EL+ RL   GYK +   +  + + E K+     HSE+LA+AFGL+  P   PL++
Sbjct: 814 YKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRV 873

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLRVC DCH+ +K  S++ RR+IV+RD  RFHHF  G CSCGDYW
Sbjct: 874 IKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 170/566 (30%), Positives = 287/566 (50%), Gaps = 10/566 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H   V  G   D  +   L+DLY +   V   R+VF +++  + VSW ++LSGYA++ 
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +      L+ +M    + P  +  S+VL       + A    +H  V K      T V N
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI++YL     + A  VF  M   D +T+N++++G+        A + F+ M L+G   
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T  S++  CA+  +L+  +QLHS +LK G+ FD+     L+  Y KCG +E A  IF
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL-----TAQP 393
           + + +  +VV W  M+  + Q   +  +   F QM   G+ PN FTY  IL     T Q 
Sbjct: 304 N-LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            +   Q+H+  IK  +E    V   L++ Y K G LD+A K+ E+++++D+V+W++M+AG
Sbjct: 363 ELGE-QIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAG 421

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    E A+  ++++   GV P+    +S  +AC A   A+ QG Q HA    +    
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASAC-AGIKAMRQGLQIHARVYVSGYAA 480

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + + + LV +Y++ G  E A  +F+    +D ++WN +I G+ Q    K+AL VF +M 
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMG 540

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           +   +++  TFI  I+A  +   + +G+Q     V   H   T E  + ++ LY + G +
Sbjct: 541 QAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSET-EVANALISLYGKCGSI 599

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC 659
           E A  I + M      + W T++ +C
Sbjct: 600 EDAKMIFSEMSLRNEVS-WNTIITSC 624



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 230/450 (51%), Gaps = 9/450 (2%)

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +++H   +  G      + N LI +Y K+ +V  AR VF  +  RD ++W +M++GY  +
Sbjct: 63  LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            L  EAF  ++ M       T     SV+  C   K     R +H+QV K     +  + 
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y   G  + A ++F  M    D V++  +ISGH Q G  + A+  F +M   G+
Sbjct: 183 NALIALYLGFGSFKLAERVFCDML-FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           RP+  T + +L A  +V       Q+H++++K      +    +LL+ YVK G ++ A  
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F L D  ++V W+ ML  Y QI D   + +I+ Q+ + G+ PN+FT+  ++  CT  + 
Sbjct: 302 IFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTC-TG 360

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +E G+Q H+ SIK    + + VS  L+ MYSK G ++ A ++ +   KRD+VSW SMI 
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIA 420

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHI 613
           GY QH   ++AL  FKEM+   +  D I      +AC     + +G Q +  + V+ +  
Sbjct: 421 GYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY-- 478

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
              +  ++ +V+LY+R G  E+A  +   +
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREI 508



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 181/350 (51%), Gaps = 7/350 (2%)

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L  ++H+  +  G+  D  I   L+  Y+K G +  A ++F  +   +D VSW AM+SG+
Sbjct: 61  LVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS-RDHVSWVAMLSGY 119

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSF 413
            Q+G    A   + QM    V P  +  S +L+A      F     +HA + K  +    
Sbjct: 120 AQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSET 179

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            VG AL+  Y+  G    A +VF  +   D V ++ +++G+AQ G  E A++I+ ++   
Sbjct: 180 FVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLS 239

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G++P+  T +S++ AC A    +++GKQ H+  +KA ++       +L+ +Y K G+IE+
Sbjct: 240 GLRPDCVTVASLLAAC-ASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A ++F    + ++V WN M+  Y Q     K+ E+F +M+   +  +  T+  ++  CT 
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTC 358

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            G ++ G+Q   + + ++     M     ++D+YS+ G L+KA  I+  +
Sbjct: 359 TGQIELGEQIHSLSI-KNGFESDMYVSGVLIDMYSKYGCLDKARKILEML 407



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 132/262 (50%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + + +   +R+ V +  ++  Y +    +EAL  F  ++  G+      L+S    C 
Sbjct: 399 KARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACA 458

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            +     G Q+H     SG+A D+++  +LV+LY R    E+   +F ++   + ++W  
Sbjct: 459 GIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNG 518

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+SG+ ++++  + L +F +M   G K N FTF + +  LA+   +    QVH   +K G
Sbjct: 519 LISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTG 578

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
               T V NALIS+Y K   + DA+ +F  M  R+ ++WN+++     +   +EA + F+
Sbjct: 579 HTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFD 638

Query: 270 NMGLAGAELTRSTFVSVIKLCA 291
            M   G +    TF+ V+  C+
Sbjct: 639 QMKQEGLKPNDVTFIGVLAACS 660



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 92/168 (54%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S++  SLF     ++ + +N L+  + +  L+++AL +F+ + + G      T  S +  
Sbjct: 498 SEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA 557

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              L D   G+QVH   VK+G   +  V+ +L+ LY +  ++ED + +F +M+  N VSW
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSW 617

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            ++++  +++      L+LF +M+ EG+KPN  TF  VL   +  G+V
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLV 665


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 296/828 (35%), Positives = 474/828 (57%), Gaps = 27/828 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGCLF 92
           +FD    +N +++N L+  Y R+ L+ + + +F+  +          T  SV+K CG + 
Sbjct: 101 VFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGIL 160

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   G  +H   +K G   DV V  +LV +Y +   V++  +VFD M E+N+VSW S++ 
Sbjct: 161 DVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMIC 220

Query: 153 GYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            ++ N  +    +L   M   EG+ P+  T  T+L V A EG V   + +H + +K G  
Sbjct: 221 AFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLS 280

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NA++ MY K   + +A+  F    +++ ++WN+M++ +       EAF     M
Sbjct: 281 EEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEM 340

Query: 272 GLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSKC 328
            + G E+  +  T ++V+  C    +LR  ++LH    ++   F H  +    ++AY+KC
Sbjct: 341 QIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHC--FQHVELSNAFILAYAKC 398

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  A K+F  + + K V SW A+I GH QNG    A++   QMT  G +P+ FT S +
Sbjct: 399 GALNSAEKVFHGIGD-KTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSL 457

Query: 389 LTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A   +   Q    +H ++++   E  F VGT+LL+ Y+  G    A  +F+ + +K++
Sbjct: 458 LLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNL 517

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+W+AM++GY+Q G    ++ ++R+  SEG++ +E    SV  AC+  SA +  GK+ H 
Sbjct: 518 VSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSA-LRLGKEAHG 576

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             +KA       V  +++ MY+K G I+ + +VF   + +++ SWN++I  +  HGH K+
Sbjct: 577 YVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKE 636

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           A+E+++ M++     D  T+IG++ AC HAGLV+EG +YF  M N + I P +EHY+C++
Sbjct: 637 AIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLI 696

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           D+ +RAG L+ A+ ++N MP  A   +W ++L +CR              L+ L+P  + 
Sbjct: 697 DMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAE 756

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YVLLSN+YA  G W    RVR++M +  ++K+AG SWIEV  + YSF+ GD   P+S +
Sbjct: 757 NYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAE 816

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           I      L  R+ + GYKP+TS VL ++ +E K  IL  HSE+LAI+FGL+ T  G  L+
Sbjct: 817 IRVIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLR 876

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           I KNLR+C DCH   KLISK   R+IVVRD  RFHHF++GLCSC DYW
Sbjct: 877 IYKNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 167/587 (28%), Positives = 299/587 (50%), Gaps = 20/587 (3%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           +L+ CG   D   GR++H     S   R D  ++T L+ +Y    +  D R VFD+M   
Sbjct: 49  LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQV 201
           N++ W +L+SGY RN +   V+++F  +  +   +P++FTF +V+        V     +
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H MVIK G  +   V NAL+ MY K   V +A  VFD M + + ++WNSM+  +  N   
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228

Query: 262 MEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
            ++F+    M G  G      T V+++ +CA   E+ +   +H   +K G+  +  +   
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--V 378
           ++  YSKCG + +A   F +    K+VVSW  MIS     G ++ A N   +M  +G  +
Sbjct: 289 MVYMYSKCGYLNEAQMSF-VKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347

Query: 379 RPNGFTYSIILTAQPAV-------SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           + N  T   IL   PA        S  ++H +  +  ++    +  A + AY K G L+ 
Sbjct: 348 KANEVT---ILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNS 403

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A KVF  I +K + +W+A++ G+AQ GD   A+ +  Q+T  G +P+ FT SS++ AC A
Sbjct: 404 AEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLAC-A 462

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
              +++ GK+ H   ++  L     V ++L++ Y   G   SA  +F R + ++LVSWN+
Sbjct: 463 HLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNA 522

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           MI GY+Q+G   ++L +F++   + ++   I  + V  AC+    +  G++    ++   
Sbjct: 523 MISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKAL 582

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                    S ++D+Y+++G ++++  + + +     A+ W  ++ A
Sbjct: 583 QTEDAFVGCS-IIDMYAKSGCIKESRKVFDGLKDKNVAS-WNAIIVA 627



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 164/347 (47%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F     +    +N L+  + ++   ++AL+L   +   G      T+SS+L  C  L
Sbjct: 405 EKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHL 464

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +G+++H   +++G   D  V TSL+  Y+        R +FD M + N+VSW +++
Sbjct: 465 KSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMI 524

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY++N +    L LF +   EGI+ +     +V G  +    +    + H  V+K    
Sbjct: 525 SGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQT 584

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  ++I MY KS  ++++R VFDG++D++  +WN+++  +  +    EA E +  M
Sbjct: 585 EDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERM 644

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR------------T 319
              G    R T++ ++  C            H+ +++ G+ +   ++             
Sbjct: 645 KKVGQMPDRFTYIGILMACG-----------HAGLVEEGLKYFKEMQNFNLIEPKLEHYA 693

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            L+   ++ G+++DA ++ + M E  D   W++++      GA+++ 
Sbjct: 694 CLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIG 740


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 296/787 (37%), Positives = 465/787 (59%), Gaps = 33/787 (4%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T S  LK C        G  VH +  +S    D     SL+ LY +    E    +F  M
Sbjct: 68  TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLM 127

Query: 140 NES-NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
             S +++SW++++S +A N M  R L  F  M   G  PN + F+      +    V+  
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187

Query: 199 VQVHTMVIKNGGEVVTSVC--NALISMYLKSKM-VRDARAVFDGMEDRDSITWNSMVAGY 255
             +   VIK G  + + VC    LI M++K +  +  A  VF+ M +R+++TW  M+   
Sbjct: 188 DSIFGFVIKTG-YLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL 246

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           +      EA + F +M  +G E  R T   VI  CA  + L L +QLHSQ +++G+  D 
Sbjct: 247 MQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDR 306

Query: 316 NIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNFFC 371
            +   L+  Y+KC   G M  A KIF  + +  +V SWTAMI+G++Q G  D  A++ F 
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILD-HNVFSWTAMITGYVQKGGYDEEALDLFR 365

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
            M    V PN FT+S  L A   ++      QV  H +K  +     V  +L++ Y + G
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +D+A K F+++ EK++++++ ++  YA+  ++E A++++ ++  +G+  + FTF+S+++
Sbjct: 426 RIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLS 485

Query: 488 ACTAPSAAVEQGKQFHACSIKA--KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
              A    + +G+Q HA  IK+  KLN ++C  +AL++MYS+ GNIESA +VF+    R+
Sbjct: 486 G-AASIGTIGKGEQIHARVIKSGLKLNQSVC--NALISMYSRCGNIESAFQVFEDMEDRN 542

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           ++SW S+I G+A+HG   +ALE+F +M  + +  + +T+I V++AC+H GLV+EG ++F 
Sbjct: 543 VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFK 602

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----- 660
            M  EH + P MEHY+C+VD+  R+G L +A+  IN MP+ A A VWRT L ACR     
Sbjct: 603 SMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNL 662

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    +I  +PHD A Y+LLSN+YA+   W E + +RK M ++ + KEAG SW+EV
Sbjct: 663 ELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEV 722

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           +NK + F  GD SHP++ +IY +L+ LS ++K  GY P+  +VL D+++E KE +L QHS
Sbjct: 723 ENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHS 782

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E++A+AFGL++T    P+++ KNLR+CGDCH+ IK IS    R+I+VRD NRFHH K+G 
Sbjct: 783 EKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGR 842

Query: 832 CSCGDYW 838
           CSC +YW
Sbjct: 843 CSCNEYW 849


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 292/808 (36%), Positives = 468/808 (57%), Gaps = 28/808 (3%)

Query: 55  RDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR 111
           R+ L+ +A+++F  ++ +    F +   T   V+K C    D   G  +H   +K G   
Sbjct: 7   RNELYSDAIDMF--VKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLL 64

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           DV V  +L+ +Y +   V+   +VF  M   N+VSW S++SG++ N  +    ++   M 
Sbjct: 65  DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124

Query: 172 V--EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
              EG+ P+  T  TVL V A E  V   +++H + +K G      V N+L+ MY K   
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGY 184

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL-AGAELTRSTFVSVIK 288
           + +A+ +FD    +++++WN+M+ G  T     EAF  F  M +    E+   T ++++ 
Sbjct: 185 LTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C    +LR  ++LH   +++G  +D  +  G + AY+KCG +  A ++F  M E K V 
Sbjct: 245 ACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSM-ETKTVN 303

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           SW A+I G  QNG    A+N + QMT  G+ P+ FT   +L A   +       +VH  +
Sbjct: 304 SWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFV 363

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           ++   E    +G +LL+ Y+  G    A  +F+ ++EK  V+W+AM++GY+Q G  E A+
Sbjct: 364 LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDAL 423

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++R+L S+G +P++    SV+ AC+  SA +  GK+ H  ++KA L   + V+ + + M
Sbjct: 424 ILFRKLVSDGFQPSDIAVVSVLGACSQQSA-LRLGKETHCYALKALLMEDVFVACSTIDM 482

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K G I+ +  VF   + +DL SWN++I  Y  HG  ++++E+F+ MR+     DG TF
Sbjct: 483 YAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTF 542

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           IG++T C+HAGLV+EG +YF+ M N H I P +EHY+C++D+  RAG L+ A+ +++ MP
Sbjct: 543 IGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMP 602

Query: 645 FAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERAR 690
               + VW ++L+ CR              L+ L+P +   YV LSN+YA +G W +  R
Sbjct: 603 EQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRR 662

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           VR+++ D  ++K+AG SWIE+  K +SF+AGD   PQS ++     +L  ++   GYKP+
Sbjct: 663 VRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPN 722

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
           TS VL D+D+E K   L  HSE+LAI FGL+ T  G  L+I KNLR+C DCH   K +S+
Sbjct: 723 TSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSE 782

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +  R+I++RD  RFHHFK+GLCSCGDYW
Sbjct: 783 VTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 221/446 (49%), Gaps = 16/446 (3%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVL 85
           Y  + Q LFD++ ++N V +N ++   C      EA NLF  ++ +  + +   T+ ++L
Sbjct: 184 YLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNIL 243

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C  +      +++H   ++ GF  D  V+   V  Y +   +    RVF  M    V 
Sbjct: 244 PACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVN 303

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW +L+ G A+N    + L L+ +M   G+ P+ FT  ++L   A    +    +VH  V
Sbjct: 304 SWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFV 363

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +++G E+ + +  +L+S+Y+       AR +FDGME++ S++WN+M++GY  N L  +A 
Sbjct: 364 LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDAL 423

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F  +   G + +    VSV+  C+    LRL ++ H   LK  +  D  +    +  Y
Sbjct: 424 ILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMY 483

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           +K G ++++  +F  ++  KD+ SW A+I+ +  +G  + ++  F +M + G  P+GFT+
Sbjct: 484 AKSGCIKESRSVFDGLKN-KDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTF 542

Query: 386 SIILT-------AQPAVSPFQ--VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK-V 435
             ILT        +  +  F    + H I+   E    V    ++   + G LD+A + V
Sbjct: 543 IGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACV----MDMLGRAGRLDDALRLV 598

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTE 461
            E+ ++ D   WS++L+     G+ E
Sbjct: 599 HEMPEQPDSRVWSSLLSFCRNFGELE 624



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 161/324 (49%), Gaps = 6/324 (1%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           +N L+    ++   ++ALNL++ +   GL     T+ S+L     L    +G++VH   +
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVL 364

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           + G   D  +  SL+ LY+        R +FD M E + VSW +++SGY++N + +  L 
Sbjct: 365 RHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALI 424

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           LF ++  +G +P+     +VLG  + +  +    + H   +K        V  + I MY 
Sbjct: 425 LFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYA 484

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           KS  ++++R+VFDG++++D  +WN+++A Y  +    E+ E F  M   G      TF+ 
Sbjct: 485 KSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIG 544

Query: 286 VIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           ++ +C+    +    +  +++   +GI+        +M    + G+++DA ++   M E 
Sbjct: 545 ILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQ 604

Query: 345 KDVVSWTAMIS-----GHLQNGAI 363
            D   W++++S     G L+ G I
Sbjct: 605 PDSRVWSSLLSFCRNFGELEIGQI 628


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 311/842 (36%), Positives = 484/842 (57%), Gaps = 47/842 (5%)

Query: 35   FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR--LGLPL------FGSTLSSV-- 84
            FD    RN V  N ++  YC+      A ++F  +++  +G  L      FGS +S+   
Sbjct: 235  FDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCS 294

Query: 85   LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
            L   G     V   Q+     KSGF  D+ V ++LV  + +  ++   + +F  M+  NV
Sbjct: 295  LANSGL----VLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNV 350

Query: 145  VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA----VQ 200
            VS   L+ G  R K  +  +ELF  M+ + ++ N  ++  +L    +  ++        +
Sbjct: 351  VSLNGLIIGLVRQKRGEEAVELFMEMK-DSVELNPNSYMIILTAFPEFHVLENGKRKGSE 409

Query: 201  VHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            VH  +I++G      ++ N LI+MY K   + DA  VF  M+++DS+TWNSM+ G   N+
Sbjct: 410  VHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNK 469

Query: 260  LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +EA +TF  M       +  T +S +  CA+   + +  QLH + LK G+D D ++  
Sbjct: 470  QFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSN 529

Query: 320  GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL--AVNFFCQMTREG 377
             L+  Y +CG +++  K FS+M +  D VSW ++I G L +    +  AV  F  M R G
Sbjct: 530  ALLALYGECGYVKECQKAFSLMLDY-DHVSWNSLI-GALADSEPSMLEAVESFLVMMRAG 587

Query: 378  VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
              PN  T+  IL A  ++S      Q+HA ++K N     ++  ALL  Y K G +    
Sbjct: 588  WDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCE 647

Query: 434  KVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
             +F  + D +D V+W++M++GY        A+ +   +  +G + + FTF++V++AC A 
Sbjct: 648  NIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSAC-AT 706

Query: 493  SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
             A +E+G + H CS++A L + + + SALV MY+K G I+ AS  F+    R+L SWNSM
Sbjct: 707  VATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSM 766

Query: 553  ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
            I GYA+HGH  K+L++F +M+ Q    D +TF+GV++AC+HAGLV+EG  +FD M   + 
Sbjct: 767  ISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYG 826

Query: 613  IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------------- 659
            + P MEH+SCMVDL  R G L K  D +N+MP   +  +WRTVL AC             
Sbjct: 827  LAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRR 886

Query: 660  ---RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTY 716
                L+ ++P ++  Y+LLSNMYA+ G W + A+ R  M    VKKEAG SW+ +K+  +
Sbjct: 887  AAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVH 946

Query: 717  SFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAI 776
             F+AGD SHP+ + IY KL+EL+ +++ AGY P+T + L D++ E KE +LS HSE++A+
Sbjct: 947  VFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAV 1006

Query: 777  AFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
            AF ++  P+  P++I+KNLRVCGDCH+  K IS++  R IV+RD+NRFHHF+ G CSCGD
Sbjct: 1007 AF-VLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGD 1065

Query: 837  YW 838
            +W
Sbjct: 1066 FW 1067



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 199/721 (27%), Positives = 337/721 (46%), Gaps = 89/721 (12%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H +  K+GF  D+ +  +L+++Y R  ++  GR+VFD+M   N+VSW+ L+SGY RN+
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT--AVQVHTMVIKNGGEVVTSV 216
           M +   ELF +M  +G  PN + F +V+    + G       +Q+H ++ K       + 
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 217 CNALISMYLKS-KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM---- 271
            N LISMY  +  MV  AR  FD +  R+ ++ NSM++ Y      + AF+ F+ M    
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 272 ---GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
              GL   E T  + +S     A +  L L  QL ++V K+G   D  + + L+  ++K 
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSG-LVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKA 332

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  A  IF  M   ++VVS   +I G ++    + AV  F +M ++ V  N  +Y II
Sbjct: 333 GSIGYAKNIFQKM-SYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMII 390

Query: 389 LTAQPAVSPF--------QVHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           LTA P             +VHA +I++       ++G  L+N Y K G +++A  VF L+
Sbjct: 391 LTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLM 450

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           D KD V W++M+ G  Q      AVK ++++    + P+ FT  S +++C A    +  G
Sbjct: 451 DNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSC-ASLGWISVG 509

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           +Q H   +K  L+  + VS+AL+ +Y + G ++   + F      D VSWNS+I   A  
Sbjct: 510 EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADS 569

Query: 560 GHTK-KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH------- 611
             +  +A+E F  M R   + + +TFI ++ A +   L + G+Q   +++  +       
Sbjct: 570 EPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAI 629

Query: 612 ------------------HIYPTME------HYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
                             +I+  M        ++ M+  Y    +L KAMD++  M    
Sbjct: 630 ENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKG 689

Query: 648 S---ATVWRTVLAACRLIS-----LQPH----------DSAIYVLLSNMYAATGHWQERA 689
                  + TVL+AC  ++     ++ H          D  I   L +MYA  G     +
Sbjct: 690 QRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYAS 749

Query: 690 RVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
           R  ++M  R +     YSW        S ++G   H       +K  +L  ++K  G  P
Sbjct: 750 RFFEMMPARNL-----YSW-------NSMISGYARHGHG----TKSLDLFAQMKLQGPLP 793

Query: 750 D 750
           D
Sbjct: 794 D 794



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 185/651 (28%), Positives = 316/651 (48%), Gaps = 33/651 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P RN V ++ L+  Y R+ +  EA  LF  +   G         SV++ C   
Sbjct: 128 RKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQEC 187

Query: 92  FDH--VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED-GRRVFDDMNESNVVSWT 148
            ++   FG Q+H    K+ +  DV  S  L+ +Y     + D  RR FD +   N+VS  
Sbjct: 188 GEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLN 247

Query: 149 SLLSGYARNKMNDRVLELFHRMQVE----GIKPNSFTFSTVLGV---LADEGIVATAVQV 201
           S++S Y +        ++F  MQ E    G+KPN +TF +++     LA+ G+V    Q+
Sbjct: 248 SMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLE-QL 306

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
            T V K+G      V +AL+S + K+  +  A+ +F  M  R+ ++ N ++ G V  +  
Sbjct: 307 LTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRG 366

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL----RLARQLHSQVLKNG-IDFDHN 316
            EA E F  M     EL  ++++ ++        L    R   ++H+ ++++G ++    
Sbjct: 367 EEAVELFMEMK-DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIA 425

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           I  GL+  Y+KCG + DA  +F +M + KD V+W +MI+G  QN     AV  F +M R 
Sbjct: 426 IGNGLINMYAKCGAINDACVVFRLM-DNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRT 484

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
            + P+ FT    L++  ++       Q+H   +K   +   SV  ALL  Y + G + E 
Sbjct: 485 ELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKEC 544

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEG----AVKIYRQLTSEGVKPNEFTFSSVINA 488
            K F L+ + D V+W++++   A   D+E     AV+ +  +   G  PN  TF +++ A
Sbjct: 545 QKAFSLMLDYDHVSWNSLIGALA---DSEPSMLEAVESFLVMMRAGWDPNRVTFITILAA 601

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLV 547
            ++ S   E GKQ HA  +K  +     + +AL+  Y K G++     +F R   R D V
Sbjct: 602 VSSLSLH-ELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEV 660

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SWNSMI GY  +    KA+++   M ++    DG TF  V++AC     ++ G +     
Sbjct: 661 SWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCS 720

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           V    +   +   S +VD+Y++ G ++ A      MP A +   W ++++ 
Sbjct: 721 VRA-CLESDIVIGSALVDMYAKCGRIDYASRFFEMMP-ARNLYSWNSMISG 769



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 220/458 (48%), Gaps = 32/458 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F     ++ V +N ++    ++    EA+  F  +RR  L     T+ S L +C  L  
Sbjct: 446 VFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGW 505

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+HCE +K G   DV+VS +L+ LY     V++ ++ F  M + + VSW SL+  
Sbjct: 506 ISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGA 565

Query: 154 YARNKMND-RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            A ++ +    +E F  M   G  PN  TF T+L  ++   +     Q+H +V+K     
Sbjct: 566 LADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAA 625

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNM 271
            T++ NAL++ Y K   +     +F  M DR D ++WNSM++GY+ NEL  +A +    M
Sbjct: 626 DTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFM 685

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G  L   TF +V+  CAT   L    ++H   ++  ++ D  I + L+  Y+KCG++
Sbjct: 686 MQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRI 745

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + AS+ F MM   +++ SW +MISG+ ++G    +++ F QM  +G  P+  T+  +L+A
Sbjct: 746 DYASRFFEMM-PARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSA 804

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                    HA ++   +                    D  ++++ L    +   +S M+
Sbjct: 805 CS-------HAGLVNEGFSH-----------------FDSMSEIYGLAPRME--HFSCMV 838

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
               ++G+         Q+    VKPN   + +V+ AC
Sbjct: 839 DLLGRVGELNKMEDFLNQMP---VKPNVLIWRTVLGAC 873



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 209/424 (49%), Gaps = 23/424 (5%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           A ++H  + KNG      +CN LI++Y +   +   R VFD M  R+ ++W+ +++GY  
Sbjct: 92  AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDH 315
           N +  EA E F  M   G       F SVI+ C    E  L+   Q+H  + K     D 
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211

Query: 316 NIRTGLMVAYSKCGKMED-ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
                L+  Y     M D A + F  +   +++VS  +MIS + Q G    A + F  M 
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWP-RNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270

Query: 375 RE----GVRPNGFTYSIILTAQPAVSPF------QVHAHIIKTNYEKSFSVGTALLNAYV 424
           +E    G++PN +T+  +++A  +++        Q+   + K+ +     VG+AL++ + 
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFA 330

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT-SEGVKPNEFTFS 483
           K G +  A  +F+ +  +++V+ + ++ G  +    E AV+++ ++  S  + PN +   
Sbjct: 331 KAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYM-- 388

Query: 484 SVINACTAPSAAVEQGK----QFHACSIKAKLNNA-LCVSSALVTMYSKKGNIESASEVF 538
            +I         +E GK    + HA  I++ L NA + + + L+ MY+K G I  A  VF
Sbjct: 389 -IILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVF 447

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
           +    +D V+WNSMI G  Q+    +A++ F+EMRR +L     T I  +++C   G + 
Sbjct: 448 RLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWIS 507

Query: 599 EGQQ 602
            G+Q
Sbjct: 508 VGEQ 511



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 51/103 (49%)

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           S   +  ++ H    K    N L + + L+ +Y++ G++ S  +VF     R+LVSW+ +
Sbjct: 86  SCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCL 145

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           I GY ++    +A E+F++M       +   F  VI AC   G
Sbjct: 146 ISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG 188


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 280/723 (38%), Positives = 444/723 (61%), Gaps = 26/723 (3%)

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           N+ ++VSW++L+S YA N+     +  F  M   G  PN + F+ V    +++  ++   
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 200 QVHTMVIKNG-GEVVTSVCNALISMYLKSKM-VRDARAVFDGMEDRDSITWNSMVAGYVT 257
            +   ++K G  E    V  ALI M++K    +  A  VFD M DR+ +TW  M+  +  
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                +A + F +M L+G    R T   V+  CA    L L RQ H  V+K+G+D D  +
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182

Query: 318 RTGLMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNFFCQM 373
              L+  Y+KC   G ++DA K+F  M  + +V+SWTA+I+G++Q+G  D  A+  F +M
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRM-PVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
            +  V+PN FT+S +L A   +S      QV+A ++K        VG +L++ Y + G +
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           + A K F+++ EK++V+++ ++  YA+  ++E A +++ ++   G   N FTF+S+++  
Sbjct: 302 ENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGA 361

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
           ++   A+ +G+Q H+  +K+   + L + +AL++MYS+ GNIE+A +VF      +++SW
Sbjct: 362 SSI-GAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
            SMI G+A+HG   +ALE F +M    +  + +T+I V++AC+H GL+ EG ++F  M  
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKV 480

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------- 660
           EH I P MEHY+C+VDL  R+G LE+AM+++N MPF A A V RT L ACR         
Sbjct: 481 EHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGK 540

Query: 661 -----LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                ++   PHD A Y+LLSN++A+ G W+E A +RK M +R + KEAG SWIEV+NK 
Sbjct: 541 HAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKV 600

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLA 775
           + F  GD SHPQ+ +IY +L++L+ ++K+ GY P T +VL D+++E KE  L QHSE++A
Sbjct: 601 HKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIA 660

Query: 776 IAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           +A+G ++T    P+++ KNLRVCGDCHT  K  S + R++IV+RD NRFHHFK+G CSC 
Sbjct: 661 VAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCN 720

Query: 836 DYW 838
           DYW
Sbjct: 721 DYW 723



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/362 (35%), Positives = 206/362 (56%), Gaps = 5/362 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR P RN V +  ++  + +    ++A++LFL +   G      TLS V+  C  +  
Sbjct: 101 VFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGL 160

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT---NNVEDGRRVFDDMNESNVVSWTSL 150
              GRQ HC  +KSG   DV V  SLVD+Y +     +V+D R+VFD M   NV+SWT++
Sbjct: 161 LSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAI 220

Query: 151 LSGYARNKMNDR-VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++GY ++   DR  +ELF  M    +KPN FTFS+VL   A+   +    QV+ +V+K  
Sbjct: 221 ITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR 280

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
              +  V N+LISMY +   + +AR  FD + +++ +++N++V  Y  +    EAFE FN
Sbjct: 281 LASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFN 340

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +  AG  +   TF S++   ++   +    Q+HS++LK+G   + +I   L+  YS+CG
Sbjct: 341 EIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCG 400

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A ++F+ M +  +V+SWT+MI+G  ++G    A+  F +M   GV PN  TY  +L
Sbjct: 401 NIEAAFQVFNEMGD-GNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVL 459

Query: 390 TA 391
           +A
Sbjct: 460 SA 461



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 171/337 (50%), Gaps = 2/337 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDS-LHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +FDR P  N + +  ++  Y +     +EA+ LFL + +  +     T SSVLK C  
Sbjct: 203 RKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACAN 262

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G QV+   VK   A    V  SL+ +Y R  N+E+ R+ FD + E N+VS+ ++
Sbjct: 263 LSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTI 322

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++ YA++  ++   ELF+ ++  G   N+FTF+++L   +  G +    Q+H+ ++K+G 
Sbjct: 323 VNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGF 382

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    +CNALISMY +   +  A  VF+ M D + I+W SM+ G+  +     A ETF+ 
Sbjct: 383 KSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHK 442

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           M  AG      T+++V+  C+    +    +   S  +++GI         ++    + G
Sbjct: 443 MLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSG 502

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            +E+A ++ + M    D +     +     +G +DL 
Sbjct: 503 HLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLG 539



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 174/317 (54%), Gaps = 23/317 (7%)

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSP 397
           M   +D+VSW+A+IS +  N     A++ F  M   G  PN + ++ +  A   +  +S 
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60

Query: 398 FQ-VHAHIIKTNY-EKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLAGY 454
            + +   ++KT Y E    VG AL++ +VK  G L+ A KVF+ + ++++V W+ M+  +
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q+G +  AV ++  +   G  P+ FT S V++AC A    +  G+QFH   +K+ L+  
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSAC-AEMGLLSLGRQFHCLVMKSGLDLD 179

Query: 515 LCVSSALVTMYSK---KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT-KKALEVFK 570
           +CV  +LV MY+K    G+++ A +VF R    +++SW ++I GY Q G   ++A+E+F 
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFL 239

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC----MVDL 626
           EM +  ++ +  TF  V+ AC +   +  G+Q + ++V        +   +C    ++ +
Sbjct: 240 EMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR-----LASINCVGNSLISM 294

Query: 627 YSRAGMLE---KAMDII 640
           YSR G +E   KA D++
Sbjct: 295 YSRCGNMENARKAFDVL 311


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 308/827 (37%), Positives = 472/827 (57%), Gaps = 25/827 (3%)

Query: 33  SLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           S+F R SP +N   +N ++  + ++ L  EAL  +  +R   +     T  SV+K C  L
Sbjct: 60  SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           FD   G  V+ + +  GF  D+ V  +LVD+Y R   +   R+VFD+M   ++VSW SL+
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY+ +   +  LE++H ++   I P+SFT S+VL    +  +V     +H   +K+G  
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF-NN 270
            V  V N L++MYLK +   DAR VFD M+ RDS+++N+M+ GY+  E+  E+   F  N
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +     +L   T  SV++ C   ++L LA+ +++ +LK G   +  +R  L+  Y+KCG 
Sbjct: 300 LDQFKPDLL--TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           M  A  +F+ M E KD VSW ++ISG++Q+G +  A+  F  M     + +  TY ++++
Sbjct: 358 MITARDVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
               ++  +    +H++ IK+      SV  AL++ Y K G + ++ K+F  +   D V 
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT 476

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ +++   + GD    +++  Q+    V P+  TF   +  C A  AA   GK+ H C 
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC-ASLAAKRLGKEIHCCL 535

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           ++    + L + +AL+ MYSK G +E++S VF+R  +RD+V+W  MI  Y  +G  +KAL
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           E F +M +  +  D + FI +I AC+H+GLVDEG   F+ M   + I P +EHY+C+VDL
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDL 655

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
            SR+  + KA + I  MP    A++W +VL AC              R+I L P D    
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           +L SN YAA   W + + +RK + D+ + K  GYSWIEV    + F +GD S PQS  IY
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIY 775

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDI-DDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
             LE L + +   GY PD   V Q++ ++E K  ++  HSERLAIAFGL+ T  G PLQ+
Sbjct: 776 KSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLRVCGDCH V KLISK+  R+I+VRD NRFH FK+G CSC D W
Sbjct: 836 MKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 276/548 (50%), Gaps = 7/548 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + +FD  P R+ V +N L+  Y     ++EAL ++  ++   +     T+SSVL   G
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G+ +H   +KSG    V V+  LV +Y++     D RRVFD+M+  + VS+ +
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNT 278

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GY + +M +  + +F    ++  KP+  T S+VL        ++ A  ++  ++K G
Sbjct: 279 MICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             + ++V N LI +Y K   +  AR VF+ ME +D+++WNS+++GY+ +   MEA + F 
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M +   +    T++ +I +     +L+  + LHS  +K+GI  D ++   L+  Y+KCG
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG 457

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++ D+ KIFS M    D V+W  +IS  ++ G     +    QM +  V P+  T+ + L
Sbjct: 458 EVGDSLKIFSSM-GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516

Query: 390 TAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
               +++      ++H  +++  YE    +G AL+  Y K G L+ +++VFE +  +D+V
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+ M+  Y   G+ E A++ +  +   G+ P+   F ++I AC+      E    F   
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKK 564
               K++  +   + +V + S+   I  A E  +    K D   W S++      G  + 
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696

Query: 565 ALEVFKEM 572
           A  V + +
Sbjct: 697 AERVSRRI 704



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 197/382 (51%), Gaps = 10/382 (2%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           S F+S  +  +++  L   R++H+ V+  G+D        L+  YS   +   +  +F  
Sbjct: 7   SPFIS--RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ- 399
           +   K+V  W ++I    +NG    A+ F+ ++    V P+ +T+  ++ A   +   + 
Sbjct: 65  VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124

Query: 400 ---VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
              V+  I+   +E    VG AL++ Y + G+L  A +VF+ +  +D+V+W+++++GY+ 
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G  E A++IY +L +  + P+ FT SSV+ A       V+QG+  H  ++K+ +N+ + 
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPA-FGNLLVVKQGQGLHGFALKSGVNSVVV 243

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V++ LV MY K      A  VF     RD VS+N+MICGY +    ++++ +F E   Q 
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ- 302

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
            + D +T   V+ AC H   +   +  ++ M+    +  +    + ++D+Y++ G +  A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR-NILIDVYAKCGDMITA 361

Query: 637 MDIINRMPFAASATVWRTVLAA 658
            D+ N M    + + W ++++ 
Sbjct: 362 RDVFNSMECKDTVS-WNSIISG 382


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 304/827 (36%), Positives = 465/827 (56%), Gaps = 49/827 (5%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            LFD+ P+R+ V +N +L  Y  +S   EAL  F    R G     S L  V+   G   D
Sbjct: 774  LFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIG--GVNSD 831

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                R+ H E VK+                M+    + G         SN+ +W   L+ 
Sbjct: 832  VSNNRKRHAEQVKA--------------YAMKMFPFDQG---------SNIFAWNKKLTE 868

Query: 154  YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            +         ++ F  +    I  +S T   +L        +    Q+H +VIK+    V
Sbjct: 869  FLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPV 928

Query: 214  TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
              V N+L++MY K+ +V  A   F    + D I+WN+M++ Y  N L MEA  TF ++  
Sbjct: 929  VPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLR 988

Query: 274  AGAELTRSTFVSVIKLCATTKE---LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
             G +  + T  SV++ C+T  E     L  Q+H   +K GI  D  + T L+  YSK GK
Sbjct: 989  DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGK 1048

Query: 331  MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            M++A  +     +  D+ SW A++ G++++     A+  F  M   G+  +  T +  + 
Sbjct: 1049 MDEAEFLLHGKYDF-DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIK 1107

Query: 391  AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
            A   +       Q+ A+ IK  +     V + +L+ Y+K G +  A ++F  I   D VA
Sbjct: 1108 ASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVA 1167

Query: 447  WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            W+ M++GY + GD + A+ +Y  +   GV+P+E+TF+++I A +  +A +EQGKQ HA  
Sbjct: 1168 WTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA-LEQGKQIHANV 1226

Query: 507  IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            +K   +    V ++LV MY K G+++ A  VF++   R +V WN+M+ G AQHGH  +AL
Sbjct: 1227 VKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEAL 1286

Query: 567  EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             +F+ M+   ++ D +TFIGV++AC+H+GL  E  +YFD M   + I P +EHYSC+VD 
Sbjct: 1287 NLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDA 1346

Query: 627  YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
              RAG +++A ++I  MPF ASA+++R +L ACR              L++L P DS+ Y
Sbjct: 1347 LGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAY 1406

Query: 673  VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
            VLLSN+YAA+  W +    R +M  + VKK+ G+SWI+VKNK + F+  D SHPQ++ IY
Sbjct: 1407 VLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIY 1466

Query: 733  SKLEELSTRLKDAG-YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
             K+E+L  R+++ G Y PDT + L D+++E KE  L  HSE+LAIAFGL++TP  A +++
Sbjct: 1467 EKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRV 1526

Query: 792  VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +KNLRVCGDCH+ IK ISKL +R+IV+RD NRFHHF+ G CSCGDYW
Sbjct: 1527 IKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/597 (26%), Positives = 282/597 (47%), Gaps = 45/597 (7%)

Query: 93   DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            D   G++ H   V SG   D  ++ +L+ +Y +  ++   R+VFD  ++ ++V+W S+L+
Sbjct: 626  DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685

Query: 153  GYAR--NKMNDRVLE---LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
             YA+  +   + VLE   LF  ++  G      T + +L +    G V  +  VH   +K
Sbjct: 686  AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745

Query: 208  NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
             G E+   V  AL+++Y K  +V  AR +FD M +RD++ WN M+  YV N    EA   
Sbjct: 746  IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 268  FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            F+    +G     S    VI       ++   R+ H++ +K               AY  
Sbjct: 806  FSAFHRSGFXPDFSNLHCVIG--GVNSDVSNNRKRHAEQVK---------------AY-- 846

Query: 328  CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
                  A K+F    +  ++ +W   ++  L  G I  A++ F  + R  +  +  T  I
Sbjct: 847  ------AMKMFP-FDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899

Query: 388  ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            IL+A           Q+HA +IK+++     V  +L+N Y K G++  A K F    E D
Sbjct: 900  ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959

Query: 444  IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA--VEQGKQ 501
            +++W+ M++ YAQ      A+  +R L  +G+KP++FT +SV+ AC+          G Q
Sbjct: 960  LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019

Query: 502  FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
             H  +IK  + N   VS+AL+ +YSK G ++ A  +   +   DL SWN+++ GY +   
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK 1079

Query: 562  TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ---YFDIMVNEHHIYPTME 618
            ++KALE F  M    +  D IT    I A      + +G+Q   Y   +   + ++ +  
Sbjct: 1080 SRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVS-- 1137

Query: 619  HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLL 675
              S ++D+Y + G +  A+++   +        W T+++       + H  ++Y L+
Sbjct: 1138 --SGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIENGDEDHALSVYHLM 1191


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 306/828 (36%), Positives = 467/828 (56%), Gaps = 51/828 (6%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKTCGCLF 92
            LFD+ P+R+ V +N +L  Y  +S   EAL  F    R G  P F S L  V+   G   
Sbjct: 774  LFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDF-SNLHCVIG--GVNS 830

Query: 93   DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            D    R+ H E VK+                M+    + G         SN+ +W   L+
Sbjct: 831  DVSNNRKRHAEQVKA--------------YAMKMFPFDQG---------SNIFAWNKKLT 867

Query: 153  GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
             +         ++ F  +    I  +S T   +L        +    Q+H +VIK+    
Sbjct: 868  EFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAP 927

Query: 213  VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            V  V N+L++MY K+ +V  A   F    + D I+WN+M++ Y  N L MEA  TF ++ 
Sbjct: 928  VVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLL 987

Query: 273  LAGAELTRSTFVSVIKLCATTKE---LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
              G +  + T  SV++ C+T  E     L  Q+H   +K GI  D  + T L+  YSK G
Sbjct: 988  RDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGG 1047

Query: 330  KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            KM++A  +     +  D+ SW A++ G++++     A+  F  M   G+  +  T +  +
Sbjct: 1048 KMDEAEFLLHGKYDF-DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAI 1106

Query: 390  TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
             A   +       Q+ A+ IK  +     V + +L+ Y+K G +  A ++F  I   D V
Sbjct: 1107 KASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEV 1166

Query: 446  AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            AW+ M++GY + GD + A+ +Y  +   GV+P+E+TF+++I A +  +A +EQGKQ HA 
Sbjct: 1167 AWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTA-LEQGKQIHAN 1225

Query: 506  SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
             +K   +    V ++LV MY K G+++ A  VF++   R +V WN+M+ G AQHGH  +A
Sbjct: 1226 VVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEA 1285

Query: 566  LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
            L +F+ M+   ++ D +TFIGV++AC+H+GL  E  +YFD M   + I P +EHYSC+VD
Sbjct: 1286 LNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVD 1345

Query: 626  LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
               RAG +++A ++I  MPF ASA+++R +L ACR              L++L P DS+ 
Sbjct: 1346 ALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSA 1405

Query: 672  YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
            YVLLSN+YAA+  W +    R +M  + VKK+ G+SWI+VKNK + F+  D SHPQ++ I
Sbjct: 1406 YVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLI 1465

Query: 732  YSKLEELSTRLKDAG-YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
            Y K+E+L  R+++ G Y PDT + L D+++E KE  L  HSE+LAIAFGL++TP  A ++
Sbjct: 1466 YEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIR 1525

Query: 791  IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ++KNLRVCGDCH+ IK ISKL +R+IV+RD NRFHHF+ G CSCGDYW
Sbjct: 1526 VIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/597 (26%), Positives = 282/597 (47%), Gaps = 45/597 (7%)

Query: 93   DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            D   G++ H   V SG   D  ++ +L+ +Y +  ++   R+VFD  ++ ++V+W S+L+
Sbjct: 626  DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685

Query: 153  GYAR--NKMNDRVLE---LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
             YA+  +   + VLE   LF  ++  G      T + +L +    G V  +  VH   +K
Sbjct: 686  AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745

Query: 208  NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
             G E+   V  AL+++Y K  +V  AR +FD M +RD++ WN M+  YV N    EA   
Sbjct: 746  IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 268  FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            F+    +G     S    VI       ++   R+ H++ +K               AY  
Sbjct: 806  FSAFHRSGFFPDFSNLHCVIG--GVNSDVSNNRKRHAEQVK---------------AY-- 846

Query: 328  CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
                  A K+F    +  ++ +W   ++  L  G I  A++ F  + R  +  +  T  I
Sbjct: 847  ------AMKMFP-FDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899

Query: 388  ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            IL+A           Q+HA +IK+++     V  +L+N Y K G++  A K F    E D
Sbjct: 900  ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959

Query: 444  IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA--VEQGKQ 501
            +++W+ M++ YAQ      A+  +R L  +G+KP++FT +SV+ AC+          G Q
Sbjct: 960  LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019

Query: 502  FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
             H  +IK  + N   VS+AL+ +YSK G ++ A  +   +   DL SWN+++ GY +   
Sbjct: 1020 VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNK 1079

Query: 562  TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ---YFDIMVNEHHIYPTME 618
            ++KALE F  M    +  D IT    I A      + +G+Q   Y   +   + ++ +  
Sbjct: 1080 SRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVS-- 1137

Query: 619  HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLL 675
              S ++D+Y + G +  A+++   +        W T+++       + H  ++Y L+
Sbjct: 1138 --SGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIENGDEDHALSVYHLM 1191


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 289/722 (40%), Positives = 417/722 (57%), Gaps = 20/722 (2%)

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           VFD+M E N VS+ +L+ GYA++       ELF R+  EG + N F F+TVL +L     
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
                 VH  V+K G    T +  ALI  Y  S  V  AR VFD +  +D ++W  M+A 
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           Y  N+   EA E F+ M +AG +    TF  V+K C   +     + +H  VLK   + D
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             +  GL+  Y++CG  +DA + F  M +  DV+ W+ MIS   Q+G  + A+  FCQM 
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPK-NDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           R  V PN FT+S +L A   +        +H H +K        V  AL+  Y K G ++
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           ++ ++FE + +++ V+W+ ++  Y Q+GD E A+ ++  +    V+  E T+SS++ AC 
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRAC- 359

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A  AA+E G Q H  + K      + V +AL+ MY+K G+I+ A  +F     RD VSWN
Sbjct: 360 ATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWN 419

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           ++ICGY+ HG   +A+++F  M+    + D +TF+GV++AC++ G +DEG+QYF  M  +
Sbjct: 420 AIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQD 479

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----------- 659
           + I P MEHY+CMV L  R+G L++A+  I  +PF  S  +WR +L AC           
Sbjct: 480 YGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRI 539

Query: 660 ---RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTY 716
              R++ L+P D A +VLLSN+YA    W   A VRK M  + VKKE G SWIE +   +
Sbjct: 540 SAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVH 599

Query: 717 SFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAI 776
            F   D SH     I   LE L+ + + AGY P  + VL D++D+ KE +L  HSERLA+
Sbjct: 600 CFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLAL 659

Query: 777 AFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
           AFGLV  PAG P++I+KNLR+C DCH+VIKLISK+  RDI+VRD NRFHHF+ G CSC D
Sbjct: 660 AFGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCAD 719

Query: 837 YW 838
           YW
Sbjct: 720 YW 721



 Score =  243 bits (620), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 155/507 (30%), Positives = 256/507 (50%), Gaps = 9/507 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P+RN V +  L+  Y + +   EA  LF  +   G  L     ++VLK    +  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR VH   +K G+  +  + T+L+D Y  +  V   R VFD+++  ++VSWT +++ 
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA N      LE F +M+V G KPN+FTF+ VL              VH  V+K   E  
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V   L+ +Y +     DA   F  M   D I W+ M++ +  +    +A E F  M  
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           A     + TF SV++  A  + L L++ +H   LK G+  D  +   LM  Y+KCG +E 
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           + ++F  + +  D VSW  +I  ++Q G  + A++ F  M R  V+    TYS IL A  
Sbjct: 302 SMELFEALSDRND-VSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 394 AVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++      QVH    KT Y +  +VG AL++ Y K G + +A  +F+++D +D V+W+A
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++ GY+  G    A+K++  +     KP+E TF  V++AC+  +  +++GKQ+   S+K 
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACS-NTGRLDEGKQYFT-SMKQ 478

Query: 510 KLNNALCVS--SALVTMYSKKGNIESA 534
                 C+   + +V +  + GN++ A
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQA 505



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 221/449 (49%), Gaps = 8/449 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD    ++ V +  ++  Y  +    EAL  F  +R  G      T + VLK C  L
Sbjct: 101 REVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGL 160

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G+ VHC  +K+ + RD+ V   L++LY R  + +D  R F DM +++V+ W+ ++
Sbjct: 161 QNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMI 220

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S +A++  +++ LE+F +M+   + PN FTFS+VL   AD   +  +  +H   +K G  
Sbjct: 221 SRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLS 280

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NAL++ Y K   +  +  +F+ + DR+ ++WN+++  YV       A   F+NM
Sbjct: 281 TDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNM 340

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                + T  T+ S+++ CAT   L L  Q+H    K     D  +   L+  Y+KCG +
Sbjct: 341 LRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSI 400

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA  +F M+ +++D VSW A+I G+  +G    A+  F  M     +P+  T+  +L+A
Sbjct: 401 KDARFMFDML-DLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSA 459

Query: 392 QPAVSPF---QVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIV 445
                     + +   +K +Y  E      T ++    + G LD+A K  E I  E  ++
Sbjct: 460 CSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVM 519

Query: 446 AWSAMLAGYAQIGDTE-GAVKIYRQLTSE 473
            W A+L       D E G +   R L  E
Sbjct: 520 IWRALLGACVIHNDVELGRISAQRVLELE 548



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 96/182 (52%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++   LF+    RN V +N ++  Y +    + AL+LF  + R  +     T SS+L+ C
Sbjct: 300 EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRAC 359

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G QVHC   K+ + +DV V  +L+D+Y +  +++D R +FD ++  + VSW 
Sbjct: 360 ATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWN 419

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ GY+ + +    +++F+ M+    KP+  TF  VL   ++ G +    Q  T + ++
Sbjct: 420 AIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQD 479

Query: 209 GG 210
            G
Sbjct: 480 YG 481


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 297/814 (36%), Positives = 458/814 (56%), Gaps = 24/814 (2%)

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
           ++ +R + E+C     + A+ L    +     L      S+L+ C        GR+V   
Sbjct: 118 LDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL--GAYCSILQLCAERKSIRDGRRVRSI 175

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
              SG   D  +   LV +Y++  ++++GR VFD ++ES +  W  ++S Y+ +      
Sbjct: 176 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 235

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           + LF +M   GIKPNS+TFS++L   A    V    QVH ++ K G     +V N+LIS 
Sbjct: 236 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 295

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y   + VR A+ +FD + DRD I+WNSM++GYV N L     E F  M + G ++  +T 
Sbjct: 296 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 355

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           V+V   CA    L L + LHS  +K   +D +      L+  YSKCG +  A ++F  M 
Sbjct: 356 VNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD 415

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
           E K VVSWT+MI+G+++ G  D A+  F +M   GV P+ +  + IL A       +   
Sbjct: 416 E-KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGK 474

Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            VH +I + N E +  V  AL + Y K G + +A  VF  + +KD+++W+ M+ GY +  
Sbjct: 475 IVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNS 534

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A+ ++ ++  E  KP+  T + ++ AC A  AA+++G++ H  +++   +    V+
Sbjct: 535 LPNEALTLFAEMQRES-KPDGTTVACILPAC-ASLAALDKGREIHGYALRNGYSEDKYVT 592

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +A+V MY K G +  A  +F     +DLVSW  MI GY  HG+  +A+  F +MR   +E
Sbjct: 593 NAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIE 652

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D ++FI ++ AC+H+GL+DEG + F+IM  E  I P +EHY+CMVDL +R G L KA  
Sbjct: 653 PDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHK 712

Query: 639 IINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGH 684
            I  MP    AT+W  +L  CR+                L+P ++  YVLL+N+YA    
Sbjct: 713 FIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEK 772

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W+E  ++RK +  R +KK  G SWIE+K K   F+AGD S PQ+ +I   L+ L +++K+
Sbjct: 773 WEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKE 832

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            GY P T+Y L + D+  KE  L  HSE+LA+AFG++  P G  +++ KNLRVCGDCH +
Sbjct: 833 EGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEM 892

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            K +SK   R+I++RD++RFHHFK+G CSC  YW
Sbjct: 893 AKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 280/550 (50%), Gaps = 16/550 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +FD+  +     +N ++ EY     + E++NLF  +  LG+     T SS+LK  
Sbjct: 202 KEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCF 261

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     GRQVH    K GF     V  SL+  Y     V   +++FD++ + +V+SW 
Sbjct: 262 AAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWN 321

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S++SGY +N ++DR +E+F +M V G+  +  T   V    A+ G +     +H+  IK 
Sbjct: 322 SMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKA 381

Query: 209 GG-EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              +      N L+ MY K   +  A  VF+ M+++  ++W SM+ GYV   L   A + 
Sbjct: 382 ATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKL 441

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M   G         S++  CA    L+  + +H  + +N ++ +  +   L   Y+K
Sbjct: 442 FDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAK 501

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG M+DA  +FS M++ KDV+SW  MI G+ +N   + A+  F +M RE  +P+G T + 
Sbjct: 502 CGSMKDAHDVFSHMKK-KDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVAC 559

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           IL A  +++      ++H + ++  Y +   V  A+++ YVK G+L  A  +F++I  KD
Sbjct: 560 ILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKD 619

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+ M+AGY   G    A+  + Q+   G++P+E +F S++ AC+      E  K F+
Sbjct: 620 LVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFN 679

Query: 504 ----ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
                C I+  L +  C    +V + ++ GN+  A +  K    K D   W +++CG   
Sbjct: 680 IMKKECQIEPNLEHYAC----MVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRI 735

Query: 559 HGHTKKALEV 568
           H   K A +V
Sbjct: 736 HHDVKLAEKV 745


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 302/827 (36%), Positives = 474/827 (57%), Gaps = 25/827 (3%)

Query: 33  SLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           S+F R SP +N   +N ++  + ++    +AL  +  +R   +     T  SV+K C  L
Sbjct: 60  SVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGL 119

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           FD   G  V+ + ++ GF  D+ V  +LVD+Y R   +   R+VFD+M   ++VSW SL+
Sbjct: 120 FDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLI 179

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY+ +   +  LE++H ++   I P+SFT S+VL   A+  +V     +H   +K+G  
Sbjct: 180 SGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVN 239

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF-NN 270
            V+ V N L++MYLK     DAR VFD M  RDS+T+N+M+ GY+  E+  E+ + F  N
Sbjct: 240 SVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLEN 299

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +     ++   T  SV+  C   ++L LA+ +++ +L+ G   +  ++  L+  Y+KCG 
Sbjct: 300 LDQFKPDIL--TVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGD 357

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           M  A  +F+ M E KD VSW ++ISG++Q+G +  A+  F  M     + +  TY ++++
Sbjct: 358 MITARDVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
               ++  +    +H++ IK+      SV  AL++ Y K G + ++ K+F  +   D V 
Sbjct: 417 LSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVT 476

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ +++   + GD    +++  Q+    V P+  TF   +  C A  AA   GK+ H C 
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMC-ASLAAKRLGKEIHCCL 535

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           ++    + L + +AL+ MYSK G +ES+  VF+R  +RD+V+W  MI  Y  +G  +KAL
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           E F +M +  +  D + FI +I AC+H+GLV++G   F+ M   + I P +EHY+C+VDL
Sbjct: 596 ESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDL 655

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
            SR+  + KA + I  MP    A++W +VL AC              R+I L P D    
Sbjct: 656 LSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           +L SN YAA   W + + +RK + D+ +KK  GYSWIE+  K + F +GD S PQS  I+
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIH 775

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDI-DDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
             LE L + +   GY PD+  V Q++ ++E K  ++  HSERLAIAFGL+ T  G PLQ+
Sbjct: 776 KSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLRVC DCH V KLISK+  R+I+VRD NRFH FK+G+CSC D W
Sbjct: 836 MKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 267/515 (51%), Gaps = 8/515 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + +FD  P R+ V +N L+  Y     ++EAL ++  +R   +     T+SSVL    
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFA 218

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G+ +H   +KSG      V+  L+ +Y++ +   D RRVFD+M   + V++ +
Sbjct: 219 NLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNT 278

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GY + +M +  +++F    ++  KP+  T ++VL        ++ A  ++  +++ G
Sbjct: 279 MICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAG 337

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             + ++V N LI +Y K   +  AR VF+ ME +D+++WNS+++GY+ +   MEA + F 
Sbjct: 338 FVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M +   +    T++ +I L     +L+  + LHS  +K+GI  D ++   L+  Y+KCG
Sbjct: 398 MMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCG 457

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++ D+ KIF+ M  + D V+W  +IS  ++ G     +    QM +  V P+  T+ + L
Sbjct: 458 EVGDSLKIFNSMGTL-DTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTL 516

Query: 390 TAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
               +++      ++H  +++  YE    +G AL+  Y K G L+ + +VFE +  +D+V
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVV 576

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHA 504
            W+ M+  Y   G+ E A++ +  +   G+ P+   F ++I AC+  S  VE+G   F  
Sbjct: 577 TWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSH-SGLVEKGLACFEK 635

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
                K++  +   + +V + S+   I  A E  +
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 198/384 (51%), Gaps = 8/384 (2%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           TR +   + +  +++  L   R++H+ V+  G+D        L+  YS       +  +F
Sbjct: 3   TRVSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVF 62

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             +   K+V  W ++I    +NG    A+ F+ ++    V P+ +T+  ++ A   +   
Sbjct: 63  RRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDA 122

Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           +    V+  I++  +E    VG AL++ Y + G+L  A +VF+ +  +D+V+W+++++GY
Sbjct: 123 EMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGY 182

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +  G  E A++IY +L +  + P+ FT SSV+ A  A    V+QG+  H  ++K+ +N+ 
Sbjct: 183 SSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPA-FANLLVVKQGQGLHGFTLKSGVNSV 241

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V++ L+ MY K      A  VF     RD V++N+MICGY +    ++++++F E   
Sbjct: 242 SVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD 301

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           Q  + D +T   V+ AC H   +   +  ++ M+    +  +    + ++D+Y++ G + 
Sbjct: 302 Q-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVK-NILIDVYAKCGDMI 359

Query: 635 KAMDIINRMPFAASATVWRTVLAA 658
            A D+ N M    + + W ++++ 
Sbjct: 360 TARDVFNSMECKDTVS-WNSIISG 382


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 284/752 (37%), Positives = 447/752 (59%), Gaps = 21/752 (2%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +K+G   D ++ +SLV++Y++  +++  R+V ++M   +V  W   LS           +
Sbjct: 16  IKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAV 75

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
           +LF+ M+   I+ N F F++++   A  G       +H  V K G E    + NA ++MY
Sbjct: 76  QLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMY 135

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
           +K++ V +    F  M   +  + N++++G+   E   +       + + G E    TF+
Sbjct: 136 MKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFI 195

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           S++K CA+  +L   + +H QV+K+GI+ D ++   L+  Y+KCG    A K+F  + E 
Sbjct: 196 SILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE- 254

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
           +DVVSWTA+I+G +  G     +  F QM  EG  PN +T+  IL +  ++S      QV
Sbjct: 255 RDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           HA I+K + + +  VGTAL++ Y K   L++A  +F  + ++D+ AW+ ++AGYAQ G  
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 373

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           E AVK + Q+  EGVKPNEFT +S ++ C+   A ++ G+Q H+ +IKA  +  + V+SA
Sbjct: 374 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRI-ATLDSGRQLHSMAIKAGQSGDMFVASA 432

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LV MY+K G +E A  VF     RD VSWN++ICGY+QHG   KAL+ F+ M  +    D
Sbjct: 433 LVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPD 492

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            +TFIGV++AC+H GL++EG+++F+ +   + I PT+EHY+CMVD+  RAG   +    I
Sbjct: 493 EVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFI 552

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
             M   ++  +W TVL AC+              L  L+P   + Y+LLSNM+AA G W 
Sbjct: 553 EEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWD 612

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           +   VR LM+ R VKKE G SW+EV  + + FL+ D SHP+  +I+ KL++L  +L   G
Sbjct: 613 DVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVG 672

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y P+T +VL ++ D  K+ +L  HSERLA+AF L++T     ++I KNLR+CGDCH  +K
Sbjct: 673 YTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMK 732

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IS++  +++VVRD N FHHFK G CSC ++W
Sbjct: 733 SISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 152/548 (27%), Positives = 290/548 (52%), Gaps = 11/548 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + + +  P ++  ++N+ L         QEA+ LF  +R   + L     +S++     L
Sbjct: 44  RQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASL 103

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D+ +G  +H    K GF  D+ +S + V +YM+T +VE+G + F  M   N+ S  +LL
Sbjct: 104 GDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLL 163

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG+   +  D+   +  ++ VEG +PN +TF ++L   A +G +     +H  VIK+G  
Sbjct: 164 SGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGIN 223

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             + + N+L+++Y K      A  VF  + +RD ++W +++ G+V  E +      FN M
Sbjct: 224 PDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA-EGYGSGLRIFNQM 282

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G      TF+S+++ C++  ++ L +Q+H+Q++KN +D +  + T L+  Y+K   +
Sbjct: 283 LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFL 342

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           EDA  IF+ + + +D+ +WT +++G+ Q+G  + AV  F QM REGV+PN FT +  L+ 
Sbjct: 343 EDAETIFNRLIK-RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 401

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              ++      Q+H+  IK        V +AL++ Y K G +++A  VF+ +  +D V+W
Sbjct: 402 CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSW 461

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + ++ GY+Q G    A+K +  +  EG  P+E TF  V++AC+      E  K F++ S 
Sbjct: 462 NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSK 521

Query: 508 KAKLNNALCVSSALVTMYSKKGNI-ESASEVFKRQRKRDLVSWNSMICGYAQHGHT---- 562
              +   +   + +V +  + G   E  S + + +   +++ W +++     HG+     
Sbjct: 522 IYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGE 581

Query: 563 KKALEVFK 570
           + A+++F+
Sbjct: 582 RAAMKLFE 589



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 228/458 (49%), Gaps = 9/458 (1%)

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           VIKNG    + + ++L+++Y+K + ++ AR V + M  +D   WN  ++   +     EA
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            + F  M      L +  F S+I   A+  +      +H+ V K G + D  I    +  
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y K   +E+  + F  M  ++++ S   ++SG       D       Q+  EG  PN +T
Sbjct: 135 YMKTQSVENGWQFFKAMM-IENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193

Query: 385 YSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +  IL    +         +H  +IK+       +  +L+N Y K G  + A KVF  I 
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           E+D+V+W+A++ G+   G   G ++I+ Q+ +EG  PN +TF S++ +C++ S  V+ GK
Sbjct: 254 ERDVVSWTALITGFVAEGYGSG-LRIFNQMLAEGFNPNMYTFISILRSCSSLS-DVDLGK 311

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q HA  +K  L+    V +ALV MY+K   +E A  +F R  KRDL +W  ++ GYAQ G
Sbjct: 312 QVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 371

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             +KA++ F +M+R+ ++ +  T    ++ C+    +D G+Q   + +        M   
Sbjct: 372 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ-SGDMFVA 430

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           S +VD+Y++ G +E A  + + +  +     W T++  
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICG 467



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 176/358 (49%), Gaps = 9/358 (2%)

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           +V+KNGI  D ++ + L+  Y KC  ++ A ++   M  ++DV  W   +S       + 
Sbjct: 14  RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEM-PIQDVQQWNQKLSSANSPYPLQ 72

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALL 420
            AV  F  M    +R N F ++ +++A  ++        +HA + K  +E    +  A +
Sbjct: 73  EAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFV 132

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
             Y+K   ++   + F+ +  +++ + + +L+G+      +   +I  QL  EG +PN +
Sbjct: 133 TMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMY 192

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           TF S++  C A    + +GK  H   IK+ +N    + ++LV +Y+K G+   A +VF  
Sbjct: 193 TFISILKTC-ASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 251

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
             +RD+VSW ++I G+   G+    L +F +M  +    +  TFI ++ +C+    VD G
Sbjct: 252 IPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +Q    +V ++ +       + +VD+Y++   LE A  I NR+        W  ++A 
Sbjct: 311 KQVHAQIV-KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-IKRDLFAWTVIVAG 366


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 288/809 (35%), Positives = 465/809 (57%), Gaps = 66/809 (8%)

Query: 94  HVFGRQV----HCECVKSGFARDVNVSTS-----------LVDLYMRTNNVEDGRRVFDD 138
           H F  +V    H  C    F R ++ +T+           L++   ++  V D R++FD 
Sbjct: 31  HKFSSKVLSFPHNPCKFMAFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDK 90

Query: 139 MNESNVVSWTSLLS-------------------------------GYARNKMNDRVLELF 167
           M + +  SW +++S                               GY +        +LF
Sbjct: 91  MPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLF 150

Query: 168 HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
             M++EG K + FT  +VL V +  G++ T   +H  V+KNG E    V   L+ MY K 
Sbjct: 151 RSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKC 210

Query: 228 KMVRDARAVFDGME-DR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K V +A  +F G+E DR + + W +MV GY  N    +A E F  M   G E  + TF +
Sbjct: 211 KCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPT 270

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++  C++        Q+H  ++K+G   +  +++ L+  Y+KCG +++A  +   M E  
Sbjct: 271 ILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETM-EDD 329

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPAVSPFQVHAH 403
           DVVSW +++ G +++G  + A+  F  M    ++ + +T+  +L      +++P  VH  
Sbjct: 330 DVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGL 389

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           IIKT +E    V  AL++ Y K G +D A  VFE + EKD+++W++++ GYAQ    E +
Sbjct: 390 IIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEES 449

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           +KI+  +   GV P++F  +S+++AC A    +E GKQ H   IK+ L  +  V ++LV 
Sbjct: 450 LKIFCDMRVTGVNPDQFIVASILSAC-AELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVA 508

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY+K G ++ A  +F   + +D+++W ++I GYAQ+G  + +L+ +  M       D IT
Sbjct: 509 MYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFIT 568

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           FIG++ AC+HAGLVDEG++YF  M   + I P  EHY+CM+DL+ R+G L++A  ++++M
Sbjct: 569 FIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQM 628

Query: 644 PFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERA 689
                ATVW+++L+ACR              L  L+P ++  YV+LSNMY+A+  W + A
Sbjct: 629 DVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVA 688

Query: 690 RVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
           ++RKLM  + + KE G SW+E+ ++  +F++ D  HP+  +IY+K++E+  R+K+AGY P
Sbjct: 689 KIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVP 748

Query: 750 DTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLIS 809
           D S+ L D+D E KE  L+ HSE+LA+AFGL+A P  AP++I KNLRVCGDCH+ +K IS
Sbjct: 749 DMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYIS 808

Query: 810 KLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++  R I++RD+N FHHF+EG CSCGDYW
Sbjct: 809 RVFTRHIILRDSNCFHHFREGECSCGDYW 837



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/583 (28%), Positives = 283/583 (48%), Gaps = 51/583 (8%)

Query: 14  QTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYN---------------RLLFE------ 52
           QT Q    L         + LFD+ PQ++   +N               R LF+      
Sbjct: 67  QTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKS 126

Query: 53  ----------YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHC 102
                     YC+     EA +LF  +R  G      TL SVL+ C  L     G  +H 
Sbjct: 127 SITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHG 186

Query: 103 ECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--DMNESNVVSWTSLLSGYARNKMN 160
             VK+GF  +V V T LVD+Y +   V +   +F   + +  N V WT++++GYA+N   
Sbjct: 187 FVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDG 246

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
            + +E F  M  +G++ N +TF T+L   +         QVH  ++K+G      V +AL
Sbjct: 247 YKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSAL 306

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           + MY K   +++A+ + + MED D ++WNS++ G+V + L  EA   F NM     ++  
Sbjct: 307 VDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDD 366

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
            TF SV+  C         + +H  ++K G +    +   L+  Y+K G M+ A  +F  
Sbjct: 367 YTFPSVLNCCVVGS--INPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEK 424

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-- 398
           M E KDV+SWT++++G+ QN + + ++  FC M   GV P+ F  + IL+A   ++    
Sbjct: 425 MLE-KDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEF 483

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             QVH   IK+    S SV  +L+  Y K G LD+A  +F  +  KD++ W+A++ GYAQ
Sbjct: 484 GKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQ 543

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HACSIKAKL 511
            G    ++K Y  + S G +P+  TF  ++ AC+  +  V++G+++         IK   
Sbjct: 544 NGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSH-AGLVDEGRKYFQQMNKVYGIKPGP 602

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
            +  C    ++ ++ + G ++ A ++  +   K D   W S++
Sbjct: 603 EHYAC----MIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLL 641



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 218/425 (51%), Gaps = 12/425 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FDR   +N V +  ++  Y ++    +A+  F  +   G+     T  ++L  C  +   
Sbjct: 225 FDR---KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLAR 281

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            FG QVH   VKSGF  +V V ++LVD+Y +  ++++ + + + M + +VVSW SL+ G+
Sbjct: 282 CFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGF 341

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            R+ + +  L LF  M    +K + +TF +VL       I      VH ++IK G E   
Sbjct: 342 VRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYK 399

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V NAL+ MY K+  +  A  VF+ M ++D I+W S+V GY  N  H E+ + F +M + 
Sbjct: 400 LVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT 459

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G    +    S++  CA    L   +Q+H   +K+G+ +  ++   L+  Y+KCG ++DA
Sbjct: 460 GVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDA 519

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY-SIILTAQP 393
             IF  M ++KDV++WTA+I G+ QNG    ++ F+  M   G RP+  T+  ++     
Sbjct: 520 DAIFVSM-QVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSH 578

Query: 394 AVSPFQVHAHIIKTNYEKSFSVG----TALLNAYVKKGILDEAAKVFELIDEK-DIVAWS 448
           A    +   +  + N       G      +++ + + G LDEA ++ + +D K D   W 
Sbjct: 579 AGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWK 638

Query: 449 AMLAG 453
           ++L+ 
Sbjct: 639 SLLSA 643



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 175/339 (51%), Gaps = 3/339 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  +++ +     + V +N L+  + R  L +EAL LF  +    + +   T  SVL  C
Sbjct: 317 KNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC 376

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +   +  + VH   +K+GF     VS +LVD+Y +T +++    VF+ M E +V+SWT
Sbjct: 377 --VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWT 434

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           SL++GYA+N  ++  L++F  M+V G+ P+ F  +++L   A+  ++    QVH   IK+
Sbjct: 435 SLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS 494

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G     SV N+L++MY K   + DA A+F  M+ +D ITW +++ GY  N     + + +
Sbjct: 495 GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFY 554

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSK 327
           + M  +G      TF+ ++  C+    +   R+   Q+ K  GI         ++  + +
Sbjct: 555 DAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGR 614

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            GK+++A ++   M    D   W +++S    +  ++LA
Sbjct: 615 SGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELA 653


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 306/773 (39%), Positives = 448/773 (57%), Gaps = 40/773 (5%)

Query: 93  DHVFGRQVHCECVKSGFA-RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
           D   GR +H   ++     RD  V+ SL+ LY R   V   R VFD M    ++VSWT++
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            S  ARN      L L   M   G+ PN++T   V        +      V   ++   G
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMG 182

Query: 211 EVVT--SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
              T  +V +ALI M  ++  +  AR VFDG+ ++  + W  +++ YV  E   EA E F
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF 242

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +    G E  R T  S+I  C     +RL  QLHS  L+ G   D  +  GL+  Y+K 
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302

Query: 329 G---KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN-FFCQMTREGVRPNGFT 384
                M+ A+K+F  MR+  DV+SWTA+ISG++Q+G  +  V   F +M  E ++PN  T
Sbjct: 303 NIEQAMDYANKVFERMRK-NDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHIT 361

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           YS IL A   +S      QVHAH+IK+N   + +VG AL++ Y + G ++EA +VF  + 
Sbjct: 362 YSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLY 421

Query: 441 EKDIVAWSAMLAGYAQIGDTEGA-VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           E+ +++             TEG    +  ++    +  +  TF+S+I+A  A    + +G
Sbjct: 422 ERSMISCI-----------TEGRDAPLDHRIGRMDMGISSSTFASLISA-AASVGMLTKG 469

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           +Q HA ++KA   +   VS++LV+MYS+ G +E A   F   + R+++SW SMI G A+H
Sbjct: 470 QQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKH 529

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G+ ++AL +F +M    ++ + +T+I V++AC+H GLV EG++YF  M  +H + P MEH
Sbjct: 530 GYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEH 589

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y+CMVDL +R+G++++A++ IN MP  A A VW+T+L ACR              +I L+
Sbjct: 590 YACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELE 649

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D A YVLLSN+YA  G W E AR+R  M D  + KE G SW+EV+N T+ F AGD SH
Sbjct: 650 PRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSH 709

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P++  IY KL+ L   +K  GY PDTS VL D+ DE KE  L QHSE++A+AFGL+ T A
Sbjct: 710 PRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSA 769

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             P++I KNLRVC DCH+ IK +SK  RR+I++RD+NRFH  K+G CSCG+YW
Sbjct: 770 PKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 198/364 (54%), Gaps = 15/364 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   ++  V +  L+  Y +    +EA+ +FL     G      T+SS++  C  L
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTEL 267

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN---NVEDGRRVFDDMNESNVVSWT 148
                G Q+H   ++ GFA D  VS  LVD+Y ++N    ++   +VF+ M +++V+SWT
Sbjct: 268 GSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWT 327

Query: 149 SLLSGYARNKMND-RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +L+SGY ++ + + +V+ LF  M  E IKPN  T+S++L   A+     +  QVH  VIK
Sbjct: 328 ALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIK 387

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +      +V NAL+SMY +S  + +AR VF+ + +R  I+   +  G      H      
Sbjct: 388 SNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS--CITEGRDAPLDH------ 439

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
              +G     ++ STF S+I   A+   L   +QLH+  LK G   D  +   L+  YS+
Sbjct: 440 --RIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSR 497

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +EDA + F+ +++ ++V+SWT+MISG  ++G  + A++ F  M   GV+PN  TY  
Sbjct: 498 CGYLEDACRSFNELKD-RNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIA 556

Query: 388 ILTA 391
           +L+A
Sbjct: 557 VLSA 560



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 102/188 (54%), Gaps = 2/188 (1%)

Query: 69  IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN 128
           I R+ + +  ST +S++     +     G+Q+H   +K+GF  D  VS SLV +Y R   
Sbjct: 441 IGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGY 500

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           +ED  R F+++ + NV+SWTS++SG A++   +R L LFH M + G+KPN  T+  VL  
Sbjct: 501 LEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSA 560

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNA-LISMYLKSKMVRDARAVFDGMEDR-DSI 246
            +  G+V    +    + ++ G +      A ++ +  +S +V++A    + M  + D++
Sbjct: 561 CSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADAL 620

Query: 247 TWNSMVAG 254
            W +++  
Sbjct: 621 VWKTLLGA 628


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 307/830 (36%), Positives = 472/830 (56%), Gaps = 50/830 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ + LFDR P R+ V +N ++  Y       E L LF    R GL     ++ ++L   
Sbjct: 174 REARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGV 233

Query: 89  GCLFDHVFGRQVHCECVKSGFARDV-NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           G                K+ F R++  V      L+           V DD  +S+V  W
Sbjct: 234 G---------------KKTVFERELEQVRAYATKLF-----------VCDD--DSDVTVW 265

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
              LS Y +       ++ F  M    +  +S T+  +L V+A    +    Q+H  V++
Sbjct: 266 NKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVR 325

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G +   SV N+ I+MY+K+  V  AR +F  M++ D I+WN++++G   + L   +   
Sbjct: 326 FGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRL 385

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELR-LARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           F ++  +G    + T  SV++ C++ +E   + RQ+H+  LK GI  D  + T L+  YS
Sbjct: 386 FIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYS 445

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K GKME+A  +F   ++  D+ SW AM+ G   +     A+  F  M   G + +  T++
Sbjct: 446 KGGKMEEAELLFHN-QDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA 504

Query: 387 IILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
               A   +   Q    +HA +IK  +     V + +L+ Y+K G +  A KVF  I   
Sbjct: 505 NAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSP 564

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D VAW+ +++G  + G+ E A+  Y Q+   GV+P+E+TF++++ AC+  +A +EQGKQ 
Sbjct: 565 DDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA-LEQGKQI 623

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           HA  +K        V ++LV MY+K GNIE A  +F+R   R +  WN+MI G AQHG+ 
Sbjct: 624 HANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNA 683

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           ++AL  F EM+ + +  D +TFIGV++AC+H+GL  +  + FD M   + + P +EHYSC
Sbjct: 684 EEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSC 743

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           +VD  SRAG +++A  +++ MPF ASAT++RT+L ACR              L ++ P D
Sbjct: 744 LVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSD 803

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           SA YVLLSN+YAA   W+     R +M    VKKE G+SWI++KNK + F+AGD SH ++
Sbjct: 804 SAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEET 863

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
           + IY+K+E +  R+K+ GY PDT + L DI++E KE+ LS HSE+LAIA+GL+ TP    
Sbjct: 864 DLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTT 923

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+++KNLRVCGDCH  IK IS + +R+IV+RD NRFHHF+ G+CSCGDYW
Sbjct: 924 LRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 175/655 (26%), Positives = 307/655 (46%), Gaps = 55/655 (8%)

Query: 32  QSLFDRSPQ--RNFVEYNRLLFEYCRDS-LH-----QEALNLFLGIRRLGLPLFGSTLSS 83
           + LFD +PQ  R+ V YN +L  Y     LH      EA ++F  +R+  +     TLS 
Sbjct: 68  RKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSP 127

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           + K C           +    VK G   DV V+ +LV++Y +   + + R +FD M   +
Sbjct: 128 LFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRD 187

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VV W  ++  Y      D VL LF      G++P+                    V V T
Sbjct: 188 VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD-------------------CVSVRT 228

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
           +++  G + V       +  Y     V D        +D D   WN  ++ Y+      E
Sbjct: 229 ILMGVGKKTVFERELEQVRAYATKLFVCD--------DDSDVTVWNKTLSSYLQAGEGWE 280

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A + F +M  +       T++ ++ + A+   L L +Q+H  V++ G D   ++    + 
Sbjct: 281 AVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAIN 340

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y K G +  A ++F  M+E+ D++SW  +ISG  ++G  + ++  F  + R G+ P+ F
Sbjct: 341 MYVKAGSVNYARRMFGQMKEV-DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQF 399

Query: 384 TYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           T + +L A  ++        QVH   +K        V TAL++ Y K G ++EA  +F  
Sbjct: 400 TITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHN 459

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV-- 496
            D  D+ +W+AM+ G+    +   A++++  +   G K ++ TF+   NA  A    V  
Sbjct: 460 QDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA---NAAKAAGCLVRL 516

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           +QGKQ HA  IK + +  L V S ++ MY K G ++SA +VF +    D V+W ++I G 
Sbjct: 517 QQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIYP 615
            ++G  ++AL  + +MR   ++ D  TF  ++ AC+    +++G+Q + +IM       P
Sbjct: 577 VENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP 636

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSA 670
            +   + +VD+Y++ G +E A  +  RM    S  +W  +     ++ L  H +A
Sbjct: 637 FV--MTSLVDMYAKCGNIEDAYGLFRRMN-TRSVALWNAM-----IVGLAQHGNA 683



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 149/583 (25%), Positives = 285/583 (48%), Gaps = 50/583 (8%)

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVSWTSL 150
           D + G++ H   V SG   D  V+ +L+ +Y +  ++   R++FD   +S+  +V++ ++
Sbjct: 28  DLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAI 87

Query: 151 LSGYARN-KMND-----RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           L+ YA   +++D         +F  ++   +     T S +  +    G  + +  +   
Sbjct: 88  LAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGY 147

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV---TNELH 261
            +K G +    V  AL+++Y K + +R+AR +FD M  RD + WN M+  YV     +  
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207

Query: 262 MEAFETFNNMGLAGAELT-RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           +  F  F+  GL    ++ R+  + V K     +EL   R                    
Sbjct: 208 LGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVR-------------------- 247

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
              AY        A+K+F +  +  DV  W   +S +LQ G    AV+ F  M +  V  
Sbjct: 248 ---AY--------ATKLF-VCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPC 295

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           +  TY +IL+   +++      Q+H  +++  +++  SV  + +N YVK G ++ A ++F
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             + E D+++W+ +++G A+ G  E +++++  L   G+ P++FT +SV+ AC++   + 
Sbjct: 356 GQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESY 415

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
             G+Q H C++KA +     VS+AL+ +YSK G +E A  +F  Q   DL SWN+M+ G+
Sbjct: 416 CVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGF 475

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
               + ++AL +F  M  +  + D ITF     A      + +G+Q   +++     Y  
Sbjct: 476 TVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL 535

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
               S ++D+Y + G ++ A  + N++P +     W TV++ C
Sbjct: 536 FV-ISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGC 576



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 223/477 (46%), Gaps = 45/477 (9%)

Query: 175 IKPNSFT---FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
           + P+S     FS +   +AD  ++    + H +++ +G      V N LI+MY K   + 
Sbjct: 7   VSPSSLLPQWFSILRHAIADSDLI-LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLF 65

Query: 232 DARAVFD--GMEDRDSITWNSMVAGYV-TNELH-----MEAFETFNNMGLAGAELTRSTF 283
            AR +FD     DRD +T+N+++A Y  T ELH      EAF  F  +  +    TR T 
Sbjct: 66  SARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTL 125

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
             + KLC        +  L    +K G+ +D  +   L+  Y+K  ++ +A  +F  M  
Sbjct: 126 SPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRM-P 184

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAH 403
           ++DVV W  M+  +++ GA D  +  F    R G+RP+  +   IL              
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGK--------- 235

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
             KT +E+        + AY        A K+F   D+ D+  W+  L+ Y Q G+   A
Sbjct: 236 --KTVFERELE----QVRAY--------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEA 281

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           V  +R +    V  +  T+  VI +  A    +E GKQ H   ++   +  + V+++ + 
Sbjct: 282 VDCFRDMIKSRVPCDSLTY-IVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAIN 340

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY K G++  A  +F + ++ DL+SWN++I G A+ G  + +L +F ++ R  L  D  T
Sbjct: 341 MYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFT 400

Query: 584 FIGVITACTHAGLVDE----GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
              V+ AC+    ++E    G+Q     +    +  +    + ++D+YS+ G +E+A
Sbjct: 401 ITSVLRACSS---LEESYCVGRQVHTCALKAGIVLDSFVS-TALIDVYSKGGKMEEA 453


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 287/761 (37%), Positives = 450/761 (59%), Gaps = 21/761 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +HC  +K G + D+     L++ Y+    +ED  ++FD+M  +N VS+ +L  G++R
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +    R   L  R+  EG + N F F+T+L +L    +  T + VH  V K G +    V
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             ALI  Y     V  AR VFDG+  +D ++W  MVA Y  N  H ++   F  M + G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                T  + +K C   +  ++ + +H   LK   D D  +   L+  Y+K G++ +A +
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQ 261

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR-PNGFTYSIILTAQPAV 395
            F  M +  D++ W+ MIS + Q+     A+  FC+M +  V  PN FT++ +L A  ++
Sbjct: 262 FFEEMPK-DDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASL 320

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                  Q+H+ ++K   + +  V  AL++ Y K G ++ + K+F    EK+ VAW+ ++
Sbjct: 321 VLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTII 380

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            GY Q+GD E A+ ++  +    ++P E T+SSV+ A +A   A+E G+Q H+ +IK   
Sbjct: 381 VGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRA-SASLVALEPGRQIHSLTIKTMY 439

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           N    V+++L+ MY+K G I+ A   F +  K+D VSWN++ICGY+ HG   +AL +F  
Sbjct: 440 NKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDM 499

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M++ + + + +TF+GV++AC++AGL+D+G+ +F  M+ ++ I P +EHY+CMV L  R+G
Sbjct: 500 MQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSG 559

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSN 677
             ++A+ +I  +PF  S  VWR +L AC              R++ ++P D A +VLLSN
Sbjct: 560 QFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSN 619

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           MYA    W   A VRK M  +KVKKE G SW+E +   + F  GD SHP    I++ LE 
Sbjct: 620 MYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEW 679

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L  + +DAGY PD S VL D++D+ KE +L  HSERLA+AFGL+  P+G  ++I+KNLR+
Sbjct: 680 LYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRI 739

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH VIKL+SK+ +R+IV+RD NRFHHF++G+CSCGDYW
Sbjct: 740 CVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 224/429 (52%), Gaps = 8/429 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD    ++ V +  ++  Y  +  H+++L LF  +R +G      T+S+ LK+C  L
Sbjct: 159 RQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGL 218

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH   +K  + RD+ V  +L++LY ++  + + ++ F++M + +++ W+ ++
Sbjct: 219 EAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMI 278

Query: 152 SGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           S YA++  +   LELF RM Q   + PN+FTF++VL   A   ++    Q+H+ V+K G 
Sbjct: 279 SRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGL 338

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    V NAL+ +Y K   + ++  +F G  +++ + WN+++ GYV      +A   F+N
Sbjct: 339 DSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSN 398

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M     + T  T+ SV++  A+   L   RQ+HS  +K   + D  +   L+  Y+KCG+
Sbjct: 399 MLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGR 458

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA   F  M + +D VSW A+I G+  +G    A+N F  M +   +PN  T+  +L+
Sbjct: 459 IDDARLTFDKM-DKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLS 517

Query: 391 A---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDI 444
           A      +   + H   +  +Y  E      T ++    + G  DEA K+  E+  +  +
Sbjct: 518 ACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSV 577

Query: 445 VAWSAMLAG 453
           + W A+L  
Sbjct: 578 MVWRALLGA 586



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 198/385 (51%), Gaps = 15/385 (3%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           ++ ++++     ++    + LH  +LK+G   D   +  L+  Y   G +EDASK+F  M
Sbjct: 5   SYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEM 64

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQPAVSP 397
             + + VS+  +  G  ++     A     ++ REG   N F ++ +L    +   A + 
Sbjct: 65  -PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTC 123

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
             VHA++ K  ++    VGTAL++AY   G +D A +VF+ I  KD+V+W+ M+A YA+ 
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
              E ++ ++ Q+   G +PN FT S+ + +C     A + GK  H C++K   +  L V
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLE-AFKVGKSVHGCALKVCYDRDLYV 242

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
             AL+ +Y+K G I  A + F+   K DL+ W+ MI  YAQ   +K+ALE+F  MR+  +
Sbjct: 243 GIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSV 302

Query: 578 EF-DGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGML 633
              +  TF  V+ AC    L++ G Q    ++    + +++ +    + ++D+Y++ G +
Sbjct: 303 VVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVS----NALMDVYAKCGEI 358

Query: 634 EKAMDIINRMPFAASATVWRTVLAA 658
           E ++ +        +   W T++  
Sbjct: 359 ENSVKLFTGST-EKNEVAWNTIIVG 382



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 171/337 (50%), Gaps = 2/337 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           Q  F+  P+ + + ++ ++  Y +    +EAL LF  +R+  + +  + T +SVL+ C  
Sbjct: 260 QQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACAS 319

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L     G Q+H   +K G   +V VS +L+D+Y +   +E+  ++F    E N V+W ++
Sbjct: 320 LVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTI 379

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GY +    ++ L LF  M    I+P   T+S+VL   A    +    Q+H++ IK   
Sbjct: 380 IVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMY 439

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              + V N+LI MY K   + DAR  FD M+ +D ++WN+++ GY  + L MEA   F+ 
Sbjct: 440 NKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDM 499

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCG 329
           M  + ++  + TFV V+  C+    L   R     +L++ GI+      T ++    + G
Sbjct: 500 MQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSG 559

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           + ++A K+   +     V+ W A++   + +  +DL 
Sbjct: 560 QFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLG 596


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 296/789 (37%), Positives = 466/789 (59%), Gaps = 33/789 (4%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T S +LK C    +   G+ +H +   S    D  +  SL+ LY ++N+      +F  M
Sbjct: 54  TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113

Query: 140 NES--NVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVA 196
             S  +VVS++S++S +A N+   + +E+F ++ ++ G+ PN + F+ V+      G   
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173

Query: 197 TAVQVHTMVIKNGGEVVTSVCNA--LISMYLKSKMVRD---ARAVFDGMEDRDSITWNSM 251
           T + +   V+K G    + VC    LI M++K   + D   AR VFD M +++ +TW  M
Sbjct: 174 TGLCLFGFVLKTG-YFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232

Query: 252 VAGYVTNELHMEAFETFNNMGLA-GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           +        + EA + F  M ++ G    R T   +I +CA  + L L ++LHS V+++G
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA--IDLAVN 368
           +  D  +   L+  Y+KCG +++A K+F  MRE  +V+SWTA+++G+++ G      A+ 
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE-HNVMSWTALVNGYVRGGGGYEREAMR 351

Query: 369 FFCQMTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
            F  M  +G V PN FT+S +L A  ++  F    QVH   IK        VG  L++ Y
Sbjct: 352 MFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVY 411

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K G ++ A K F+++ EK++V+ + +     +  +      + R++   G   + FT++
Sbjct: 412 AKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYA 471

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
           S+++   A    + +G+Q HA  +K      L V++AL++MYSK GN E+A +VF     
Sbjct: 472 SLLSG-AACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMED 530

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
            ++++W S+I G+A+HG   KALE+F  M    ++ + +T+I V++AC+H GL+DE  ++
Sbjct: 531 CNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKH 590

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--- 660
           F  M + H I P MEHY+CMVDL  R+G+L +A++ IN MPF A A VWRT L +CR   
Sbjct: 591 FTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHR 650

Query: 661 -----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
                      ++  +PHD A Y+LLSN+YA  G W++ A +RK M  +++ KEAG SWI
Sbjct: 651 NTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWI 710

Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
           EV+N+ + F  GD  HP++ QIY KL+EL+ ++K+ GY P+T +VL D++DE KE  L Q
Sbjct: 711 EVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQ 770

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSE+LA+AF L++TP   P+++ KNLRVCGDCHT IK IS +  R+IVVRD NRFHH K+
Sbjct: 771 HSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKD 830

Query: 830 GLCSCGDYW 838
           G CSC DYW
Sbjct: 831 GTCSCNDYW 839



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 192/370 (51%), Gaps = 17/370 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGC 90
           + +FD+  ++N V +  ++    +   + EA++LFL  +   G      TL+ ++  C  
Sbjct: 215 RKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAE 274

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +     G+++H   ++SG   D+ V  SLVD+Y +   V++ R+VFD M E NV+SWT+L
Sbjct: 275 IQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTAL 334

Query: 151 LSGYAR--NKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           ++GY R         + +F  M ++ G+ PN FTFS VL   A         QVH   IK
Sbjct: 335 VNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIK 394

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G   +  V N L+S+Y KS  +  AR  FD + +++      +V+  V ++ +++ F  
Sbjct: 395 LGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKN------LVSETVVDDTNVKDFNL 448

Query: 268 FNNMGL------AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +   L       G+ ++  T+ S++   A    +    Q+H+ V+K G   D ++   L
Sbjct: 449 NSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNAL 508

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  YSKCG  E A ++F+ M +  +V++WT++I+G  ++G    A+  F  M   GV+PN
Sbjct: 509 ISMYSKCGNKEAALQVFNDMEDC-NVITWTSIINGFAKHGFASKALELFYNMLETGVKPN 567

Query: 382 GFTYSIILTA 391
             TY  +L+A
Sbjct: 568 DVTYIAVLSA 577



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 18/235 (7%)

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
           +E    N+   SS++      +     GK  H     + L     + ++L+T+YSK  + 
Sbjct: 44  TESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDP 103

Query: 532 ESASEVFK--RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF-DGITFIGVI 588
            +A  +F+     KRD+VS++S+I  +A + +  KA+E+F ++  QD  + +   F  VI
Sbjct: 104 ITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVI 163

Query: 589 TACTHAGLVDEGQQYFDIMVN----EHHIYPTMEHYSCMVDLYSRA---GMLEKAMDIIN 641
            AC   G    G   F  ++     + H+    E    ++D++ +      LE A  + +
Sbjct: 164 RACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCE----LIDMFVKGCSLADLESARKVFD 219

Query: 642 RMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           +M    +   W   L   RL     +D AI + L  M  ++G+  +R  +  L++
Sbjct: 220 KMR-EKNVVTW--TLMITRLAQYGYNDEAIDLFLE-MLVSSGYVPDRFTLTGLIS 270


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 304/773 (39%), Positives = 447/773 (57%), Gaps = 40/773 (5%)

Query: 93  DHVFGRQVHCECVKSGFA-RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
           D   GR +H   ++     RD  V+ SL+ LY R   V   R VFD M    ++VSWT++
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            S  ARN      L L   M   G+ PN++T            +      V   ++   G
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMG 182

Query: 211 EVVTSVC--NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
              T V   +ALI M  ++  +  AR VFDG+ ++  + W  +++ YV  E   EA E F
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELF 242

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +    G E  R T  S+I  C     +RL  QLHS  L+ G+  D  +  GL+  Y+K 
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKS 302

Query: 329 G---KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV-NFFCQMTREGVRPNGFT 384
                M+ A+K+F  M +  DV+SWTA+ISG++Q+G  +  V   F +M  E ++PN  T
Sbjct: 303 NIGQAMDYANKVFERMPK-NDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHIT 361

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           YS IL +  ++S      QVHAH+IK+N   + +VG AL++ Y + G ++EA +VF  + 
Sbjct: 362 YSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLY 421

Query: 441 EKDIVAWSAMLAGYAQIGDTEGA-VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           E+ ++              TEG    +  ++    V  +  TF+S+I+A  A    + +G
Sbjct: 422 ERSMIPCI-----------TEGRDFPLDHRIVRMDVGISSSTFASLISA-AASVGMLTKG 469

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           +Q HA S+KA   +   VS++LV+MYS+ G +E A   F   + R+++SW SMI G A+H
Sbjct: 470 QQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKH 529

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G+ ++AL +F +M    ++ + +T+I V++AC+H GLV EG++YF  M  +H + P MEH
Sbjct: 530 GYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEH 589

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y+CMVDL +R+G++++A++ IN MP  A A VW+T+L ACR              ++ L+
Sbjct: 590 YACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELE 649

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D A YVLLSN+YA  G W E AR+R  M D  + KE G SW+EV+N T+ F AGD SH
Sbjct: 650 PRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSH 709

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P++  IY KL+ L  ++K  GY PDTS VL D+ DE KE  L QHSE++A+AFGL+ T A
Sbjct: 710 PRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSA 769

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             P++I KNLRVC DCH+ IK +SK  RR+I++RD+NRFH  K+G CSCG+YW
Sbjct: 770 PKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 219/432 (50%), Gaps = 21/432 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   ++  V +  L+  Y +    +EA+ LFL     G      T+SS++  C  L
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTEL 267

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN---NVEDGRRVFDDMNESNVVSWT 148
                G Q+H   ++ G A D  VS  LVD+Y ++N    ++   +VF+ M +++V+SWT
Sbjct: 268 GSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWT 327

Query: 149 SLLSGYARNKMND-RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +L+SGY ++ + + +V+ LF  M  E IKPN  T+S++L   A      +  QVH  VIK
Sbjct: 328 ALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIK 387

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +      +V NAL+SMY +S  + +AR VF+ + +R      SM+            F  
Sbjct: 388 SNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER------SMIPCITEG----RDFPL 437

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            + +      ++ STF S+I   A+   L   +QLH+  LK G   D  +   L+  YS+
Sbjct: 438 DHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSR 497

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +EDA + F+ +++ ++V+SWT+MISG  ++G  + A++ F  M   GV+PN  TY  
Sbjct: 498 CGYLEDACRSFNELKD-RNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIA 556

Query: 388 ILTAQPAVSPFQVHAHIIKTNYEKSFSVG-----TALLNAYVKKGILDEAAK-VFELIDE 441
           +L+A   V   +      ++       +        +++   + GI+ EA + + E+  +
Sbjct: 557 VLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLK 616

Query: 442 KDIVAWSAMLAG 453
            D + W  +L  
Sbjct: 617 ADALVWKTLLGA 628


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/821 (34%), Positives = 468/821 (57%), Gaps = 26/821 (3%)

Query: 38  SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           SP  N   +N ++     + L  +AL  +  +R   L     T  SV+ +C  + D   G
Sbjct: 81  SPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG 140

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
             VH   ++ GF  D+ +  +L+D+Y R  ++++ R VF++M+  + VSW SL+SGY  N
Sbjct: 141 CIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSN 200

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--GEVVTS 215
              +  L+++H+ ++ G+ P+ FT S+VL        V   V VH ++ K G  G+V+  
Sbjct: 201 GFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI-- 258

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           + N L+SMY K + +R+AR VF  M  +DS+TWN+M+ GY     H  + + F +M + G
Sbjct: 259 IGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDG 317

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 +  S I+ C  + +L++ + +H  ++ +G + D      L+  Y+KCG +  A 
Sbjct: 318 FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQ 377

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F   +  KD V+W ++I+G+ Q+G     +  F  M  E  +P+  T+ ++L+    +
Sbjct: 378 EVFDTTK-CKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQL 435

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +       +H  +IK  +E    +G +LL+ Y K G +D+  KVF  +   DI++W+ ++
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           A      D     ++  ++ +EG+ P+E T   ++  C+   A   QGK+ H    K+  
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLL-AVRRQGKEIHGYIFKSGF 554

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            + + + +AL+ MYSK G++E+  +VFK  +++D+V+W ++I  +  +G  KKAL+ F++
Sbjct: 555 ESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M    +  D + FI  I AC+H+G+V EG ++FD M  ++++ P MEHY+C+VDL +R+G
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
           +L +A + I  MP    A++W  +L+ACR              ++ L   D+  YVL+SN
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSN 734

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA  G W +   VR  M  + +KKE G SWIE++ + Y F  GD S  Q +++   LE 
Sbjct: 735 IYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEY 794

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L   +   GY  D  + L D++++ K  +L  HSERLAIAFGL+ T  G+PL ++KNLRV
Sbjct: 795 LVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRV 854

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCHTV K I+K+ +R+I+VRD NRFH FK+G CSCGD+W
Sbjct: 855 CGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 276/552 (50%), Gaps = 24/552 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+    R+ V +N L+  YC +   ++AL+++   R  G+     T+SSVL  CG L  
Sbjct: 178 VFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMA 237

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  VH    K G A DV +   L+ +Y +   + + RRVF  M   + V+W +++ G
Sbjct: 238 VKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG 297

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+   ++  ++LF  M ++G  P+  + ++ +      G +     VH  +I +G E  
Sbjct: 298 YAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECD 356

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T  CN LI MY K   +  A+ VFD  + +DS+TWNS++ GY  +  + E  E+F  M +
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKM 416

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    TFV ++ + +   ++   R +H  V+K G + +  I   L+  Y+KCG+M+D
Sbjct: 417 E-RKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
             K+FS M    D++SW  +I+  +      +      +M  EG+ P+  T   +L   P
Sbjct: 476 LLKVFSYM-SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEAT---VLGILP 531

Query: 394 AVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
             S         ++H +I K+ +E +  +G AL+  Y K G L+   KVF+ + EKD+V 
Sbjct: 532 MCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVT 591

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH--- 503
           W+A+++ +   G+ + A+K ++ +   GV P+   F + I AC+  S  V++G +F    
Sbjct: 592 WTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSH-SGMVKEGLRFFDRM 650

Query: 504 --ACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHG 560
               +++ ++ +  CV    V + ++ G +  A E +     K D   W +++      G
Sbjct: 651 KTDYNLEPRMEHYACV----VDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARG 706

Query: 561 HTKKALEVFKEM 572
           +T  A  V K++
Sbjct: 707 NTNIAQRVSKKI 718



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 242/485 (49%), Gaps = 13/485 (2%)

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           F  S++L  L+          VH+++I +G  +       LIS Y + K    + +VF  
Sbjct: 20  FLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRS 79

Query: 240 MEDRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
           +   +++  WNS++     N L  +A   +  M     +    TF SVI  CA   +L L
Sbjct: 80  ISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLEL 139

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
              +H   ++ G + D  I   L+  YS+   +++A  +F  M   +D VSW ++ISG+ 
Sbjct: 140 GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN-RDSVSWNSLISGYC 198

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFS 414
            NG  + A++ + +    G+ P+ FT S +L A  ++   +    VH  I K        
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI 258

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           +G  LL+ Y K   L EA +VF  +  KD V W+ M+ GYAQ+G  E +VK++  +  +G
Sbjct: 259 IGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DG 317

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
             P+  + +S I AC   S  ++ GK  H   I +         + L+ MY+K G++ +A
Sbjct: 318 FVPDMLSITSTIRAC-GQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            EVF   + +D V+WNS+I GY Q G+ K+ LE FK M + + + D +TF+ +++  +  
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQL 435

Query: 595 GLVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
             +++G+  + D++  +      +   + ++D+Y++ G ++  + + + M  A     W 
Sbjct: 436 ADINQGRGIHCDVI--KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS-AHDIISWN 492

Query: 654 TVLAA 658
           TV+A+
Sbjct: 493 TVIAS 497



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 202/440 (45%), Gaps = 47/440 (10%)

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           FNN      E  RS+ +  +     T +LR    +HS ++ +G+         L+  Y++
Sbjct: 10  FNNTPEPSQEFLRSSLLKTLSSAKNTPQLR---TVHSLIITSGLSLSVIFSGKLISKYAQ 66

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
                 +  +F  +    +V  W ++I     NG    A+ ++ +M  + ++P+ FT+  
Sbjct: 67  VKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPS 126

Query: 388 ILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           ++ +   +   +    VH H ++  +E    +G AL++ Y +   LD A  VFE +  +D
Sbjct: 127 VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            V+W+++++GY   G  E A+ +Y +    G+ P+ FT SSV+ AC     AV++G   H
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLAC-GSLMAVKEGVAVH 245

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
               K  +   + + + L++MY K   +  A  VF +   +D V+WN+MICGYAQ G  +
Sbjct: 246 GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHE 305

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH-HIYPTMEHYSC 622
            ++++F +M    +  D ++    I AC  +G         D+ V +  H Y     + C
Sbjct: 306 ASVKLFMDMIDGFVP-DMLSITSTIRACGQSG---------DLQVGKFVHKYLIGSGFEC 355

Query: 623 -------MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLL 675
                  ++D+Y++ G L  A ++ +                 C+       DS  +  L
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDT--------------TKCK-------DSVTWNSL 394

Query: 676 SNMYAATGHWQERARVRKLM 695
            N Y  +G+++E     K+M
Sbjct: 395 INGYTQSGYYKEGLESFKMM 414


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 301/825 (36%), Positives = 460/825 (55%), Gaps = 62/825 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+    R+ V +  ++    ++   +EA+ LF  I              VL  C  +
Sbjct: 219 KKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKV 264

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               FG+Q+H   +K GF+ +  V  +LV LY R+ N+    ++F  M++ + VS+ SL+
Sbjct: 265 EFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLI 324

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG A+    +R L LF +M ++  KP+  T +++L   A  G +    Q H+  IK G  
Sbjct: 325 SGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMT 384

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  +L+ +Y+K   ++ A   F      D++                ++F+ F  M
Sbjct: 385 SDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQIFTQM 429

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            + G    + T+ S++K C T     L  Q+H+QVLK G  F+  + + L+  Y+K GK+
Sbjct: 430 QIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKL 489

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A KIF  ++E  DVVSWTAMI+G+ Q+     A+N F +M  +G++ +   ++  ++A
Sbjct: 490 DHALKIFRRLKE-NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISA 548

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       Q+HA    + Y    S+G AL++ Y + G + EA   F+ I  KD V+W
Sbjct: 549 CAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSW 608

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +++++G+AQ G  E A+ I+ Q+   G++ N FTF S ++A  A  A V  GKQ H    
Sbjct: 609 NSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSA-AANIANVRIGKQIHGMIR 667

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K   ++   VS+AL+T+Y+K G I             D +SWNSMI GY+QHG   +AL+
Sbjct: 668 KTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCGFEALK 714

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F++M++ D+  + +TF+GV++AC+H GLVDEG  YF  M   H++ P  EHY+C+VDL 
Sbjct: 715 LFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLL 774

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
            R+G+L +A   +  MP    A VWRT+L+AC               L+ L+P DSA YV
Sbjct: 775 GRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYV 834

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           L+SNMYA +G W  R R R++M DR VKKE G SW+EV N  ++F AGD +HP+++ IY 
Sbjct: 835 LVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYE 894

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
            L  L  R  + GY P  + +L D +   K+     HSERLAIAFGL++  +  PL + K
Sbjct: 895 YLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFK 954

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVC DCH  IK +SK+  R I+VRD+ RFHHFK G CSC DYW
Sbjct: 955 NLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 167/607 (27%), Positives = 297/607 (48%), Gaps = 37/607 (6%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC-GCL 91
           ++FD  P R+   +NR+   +  + L      LF  +    +       + VL+ C G  
Sbjct: 118 NVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNA 177

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               F  Q+H + + SGF     +   L+DLY +   +   ++VF+++   + VSW +++
Sbjct: 178 VSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMI 237

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG ++N   +  + LF ++              VL             Q+H +V+K G  
Sbjct: 238 SGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFS 283

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T VCNAL+++Y +S  +  A  +F  M  RD +++NS+++G         A   F  M
Sbjct: 284 SETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKM 343

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L   +    T  S++  CA+   L   +Q HS  +K G+  D  +   L+  Y KC  +
Sbjct: 344 NLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDI 403

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A + F              +  G L N  ++ +   F QM  EG+ PN FTY  IL  
Sbjct: 404 KTAHEFF--------------LCYGQLDN--LNKSFQIFTQMQIEGIVPNQFTYPSILKT 447

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       Q+H  ++KT ++ +  V + L++ Y K G LD A K+F  + E D+V+W
Sbjct: 448 CTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSW 507

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AM+AGY Q      A+ +++++  +G+K +   F+S I+AC A   A++QG+Q HA S 
Sbjct: 508 TAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISAC-AGIQALDQGRQIHAQSC 566

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
            +  ++ L + +ALV++Y++ G +  A   F +   +D VSWNS++ G+AQ G+ ++AL 
Sbjct: 567 LSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALN 626

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F +M +  LE +  TF   ++A  +   V  G+Q    M+ +       E  + ++ LY
Sbjct: 627 IFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHG-MIRKTGYDSETEVSNALITLY 685

Query: 628 SRAGMLE 634
           ++ G ++
Sbjct: 686 AKCGTID 692



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 268/552 (48%), Gaps = 52/552 (9%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+D Y+   ++     VFD+M   ++  W  + + +   ++  RV  LF RM  + ++ +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 179 SFTFSTVLGVLADEGIVATAV-QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
              F+ VL   +   +    V Q+H   I +G E  T +CN LI +Y K+  +  A+ VF
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           + ++ RDS++W +M++G   N    EA   F  +              V+  C   +   
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFE 268

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
             +QLH  VLK G   +  +   L+  YS+ G +  A +IF  M + +D VS+ ++ISG 
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQ-RDRVSYNSLISGL 327

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSF 413
            Q G I+ A+  F +M  +  +P+  T + +L+A  +V       Q H++ IK       
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            V  +LL+ YVK   +  A + F                 Y Q+ +   + +I+ Q+  E
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIE 432

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G+ PN+FT+ S++  CT    A + G+Q H   +K      + VSS L+ MY+K G ++ 
Sbjct: 433 GIVPNQFTYPSILKTCTTL-GATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDH 491

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A ++F+R ++ D+VSW +MI GY QH    +AL +FKEM+ Q ++ D I F   I+AC  
Sbjct: 492 ALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAG 551

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYS-------CMVDLYSRAGMLEKAMDIINRMPFA 646
              +D+G+Q         H    +  YS        +V LY+R G + +A    +++ +A
Sbjct: 552 IQALDQGRQI--------HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI-YA 602

Query: 647 ASATVWRTVLAA 658
                W ++++ 
Sbjct: 603 KDNVSWNSLVSG 614



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/515 (24%), Positives = 226/515 (43%), Gaps = 82/515 (15%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y   G +  A  +F  M  ++ +  W  + +  +    +      F +M  + V  
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEM-PIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161

Query: 381 NGFTYSIIL--TAQPAVS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           +   ++++L   +  AVS     Q+HA  I + +E S  +   L++ Y K G L  A KV
Sbjct: 162 DERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKV 221

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE +  +D V+W AM++G +Q G  E A+ ++ Q+              V++ACT     
Sbjct: 222 FENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVE-F 266

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            E GKQ H   +K   ++   V +ALVT+YS+ GN+ SA ++F    +RD VS+NS+I G
Sbjct: 267 FEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISG 326

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY------------ 603
            AQ G+  +AL +FK+M     + D +T   +++AC   G +  G+Q+            
Sbjct: 327 LAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSD 386

Query: 604 -------FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA---SATVWR 653
                   D+ V    I    E + C    Y +   L K+  I  +M       +   + 
Sbjct: 387 IVVEGSLLDLYVKCSDIKTAHEFFLC----YGQLDNLNKSFQIFTQMQIEGIVPNQFTYP 442

Query: 654 TVLAACRLISL-----QPHDSA--------IYV--LLSNMYAATGHWQERARVRKLMNDR 698
           ++L  C  +       Q H           +YV  +L +MYA  G      ++      R
Sbjct: 443 SILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIF-----R 497

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ---IYSKLEELSTRLKDAGYKPDTSYV- 754
           ++K+    SW        + +AG   H +  +   ++ ++++   +  + G+    S   
Sbjct: 498 RLKENDVVSWT-------AMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACA 550

Query: 755 -LQDIDDE---HKEAILSQHSERLAIAFGLVATPA 785
            +Q +D     H ++ LS +S+ L+I   LV+  A
Sbjct: 551 GIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYA 585



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 123/238 (51%), Gaps = 25/238 (10%)

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ---IGDTEGAVKIY 467
           +SF  G  L++ Y+  G L+ A  VF+ +  + +  W+ +   +     +G   G   ++
Sbjct: 95  RSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPG---LF 151

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           R++ ++ V+ +E  F+ V+  C+  + +    +Q HA +I +   ++  + + L+ +Y K
Sbjct: 152 RRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFK 211

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G + SA +VF+  + RD VSW +MI G +Q+G+ ++A+ +F ++              V
Sbjct: 212 NGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------V 257

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC--MVDLYSRAGMLEKAMDIINRM 643
           ++ACT     + G+Q   +++ +     + E Y C  +V LYSR+G L  A  I + M
Sbjct: 258 LSACTKVEFFEFGKQLHGLVLKQGF---SSETYVCNALVTLYSRSGNLSSAEQIFHCM 312


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 292/830 (35%), Positives = 461/830 (55%), Gaps = 20/830 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           YS   + +  + P R+ V +  L+     +    +++ LF  ++  G+     TL++ LK
Sbjct: 162 YSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLK 221

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        G+Q+H +  K G   D+ V ++LVDLY +   +E   ++F  M E N V+
Sbjct: 222 ACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT 281

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  LL+GYA+      VL+LF  M    +K N FT +TVL   A+   +     +H+++I
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G E    +   L+ MY K  +  DA  VF  ++  D + W++++          E+ +
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M L      + T  S++     T  L+  + +H+ V K G + D  +   L+  Y 
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G + D +K++  M + +D++SW A +SG    G  D  +  F  M  EG  PN +T+ 
Sbjct: 462 KNGCVHDGTKLYESMVD-RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            IL +   +       QVHAHIIK   + +  V TAL++ Y K   L++A   F  +  +
Sbjct: 521 SILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR 580

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+  W+ ++  YAQ    E A+  +RQ+  EGVKPNEFT +  ++ C++  A++E G+Q 
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSL-ASLEGGQQL 639

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H+   K+   + + V SALV MY+K G +E A  +F+   +RD ++WN++ICGYAQ+G  
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            KAL  F+ M  + +  DG+TF G+++AC+H GLV+EG+++F+ M  +  I PT++H +C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQPHD 668
           MVD+  R G  ++  D I +M  + +A +W TVL              AA +L  LQP +
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
            + Y+LLSN++A  G W +  RVR LM+ + VKKE G SW+E   + ++F++ D SHPQ 
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQI 879

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            +I+ KL+EL   L    Y P T YVL ++ +  K+  L  HSERLA+ F L++T +   
Sbjct: 880 QEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKK 939

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++I KNLR+C DCH V+K IS +  ++IVVRD  RFHHFK G CSC D+W
Sbjct: 940 IRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 167/581 (28%), Positives = 290/581 (49%), Gaps = 8/581 (1%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           SS+L+ C         + +H   VK     D ++  SLV++Y +       R V   M +
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            +VVSWT+L+ G       +  + LF  MQ EGI PN FT +T L   +    +    Q+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H    K G  +   V +AL+ +Y K   +  A  +F GM +++ +TWN ++ GY      
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
               + F +M     +    T  +V+K CA +K L+  + +HS ++K G + +  I  GL
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  YSKCG   DA  +F  +++  D+V W+A+I+   Q G  + ++  F  M      PN
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKK-PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414

Query: 382 GFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            +T   +L+A       Q    +HA + K  +E   +V  AL+  Y+K G + +  K++E
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            + ++D+++W+A L+G    G  +  + I+  +  EG  PN +TF S++ +C+     V 
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCL-FDVH 533

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G+Q HA  IK +L++   V +AL+ MY+K   +E A   F R   RDL +W  +I  YA
Sbjct: 534 YGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYA 593

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           Q    +KAL  F++M+++ ++ +  T  G ++ C+    ++ GQQ   ++    H+   M
Sbjct: 594 QTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHV-SDM 652

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
              S +VD+Y++ G +E+A  +   +        W T++  
Sbjct: 653 FVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 241/470 (51%), Gaps = 15/470 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +S++L   A +  +  A  +H +++K+     + +  +L+++Y K +    AR V   M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           DRD ++W +++ G V      ++   F  M   G      T  + +K C+    L L +Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H+Q  K G+  D  + + L+  Y+KCG++E ASK+F  M E  D V+W  +++G+ Q G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND-VTWNVLLNGYAQRG 293

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGT 417
            +   +  FC M    V+ N FT + +L         +    +H+ IIK  YE +  +G 
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
            L++ Y K G+  +A  VF+ I + DIV WSA++    Q G +E ++K++  +      P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           N++T  S+++A T  +  ++ G+  HAC  K      + VS+ALVTMY K G +   +++
Sbjct: 414 NQYTICSLLSAAT-NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           ++    RDL+SWN+ + G    G   + L +F  M  +    +  TFI ++ +C+    V
Sbjct: 473 YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532

Query: 598 DEGQQYFDIMVNEHHIYPTME--HYSC--MVDLYSRAGMLEKAMDIINRM 643
             G+Q     V+ H I   ++  ++ C  ++D+Y++   LE A    NR+
Sbjct: 533 HYGRQ-----VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 306/827 (37%), Positives = 475/827 (57%), Gaps = 54/827 (6%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            LFD    R+ V +N ++  Y    L  EA+ LF    R G      TL ++ +   C  +
Sbjct: 817  LFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKN 876

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             +  +Q      K               L+M           +DD + S+V+ W   LS 
Sbjct: 877  ILELKQFKAYATK---------------LFM-----------YDD-DGSDVIVWNKALSR 909

Query: 154  YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            + +       ++ F  M    +  +  TF  +L V+A    +    Q+H +V+++G + V
Sbjct: 910  FLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQV 969

Query: 214  TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             SV N LI+MY+K+  V  AR+VF  M + D I+WN+M++G   + L   +   F ++  
Sbjct: 970  VSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLR 1029

Query: 274  AGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                  + T  SV++ C++ +    LA Q+H+  +K G+  D  + T L+  YSK GKME
Sbjct: 1030 DSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKME 1089

Query: 333  DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            +A  +F + ++  D+ SW A++ G++ +G    A+  +  M   G R +  T   ++ A 
Sbjct: 1090 EAEFLF-VNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQIT---LVNAA 1145

Query: 393  PAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
             A           Q+HA ++K  +     V + +L+ Y+K G ++ A +VF  I   D V
Sbjct: 1146 KAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDV 1205

Query: 446  AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            AW+ M++G  + G  E A+  Y Q+    V+P+E+TF++++ AC+  +A +EQG+Q HA 
Sbjct: 1206 AWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTA-LEQGRQIHAN 1264

Query: 506  SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
             +K        V ++LV MY+K GNIE A  +FKR   R + SWN+MI G AQHG+ K+A
Sbjct: 1265 IVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEA 1324

Query: 566  LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
            L+ FK M+ + +  D +TFIGV++AC+H+GLV E  + F  M   + I P +EHYSC+VD
Sbjct: 1325 LQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVD 1384

Query: 626  LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
              SRAG +E+A  +I+ MPF ASA+++RT+L ACR              L++L+P DSA 
Sbjct: 1385 ALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAA 1444

Query: 672  YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
            YVLLSN+YAA   W+  A  R +M    VKK+ G+SW+++KNK + F+AGD SH +++ I
Sbjct: 1445 YVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1504

Query: 732  YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
            Y+K+E +  R+++ GY PDT + L D+++E KE  L  HSE+LAIA+GL+ TP    L++
Sbjct: 1505 YNKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRV 1564

Query: 792  VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +KNLRVCGDCH+ IK ISK+ +R+IV+RD NRFHHF+ G+CSCGDYW
Sbjct: 1565 IKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/593 (27%), Positives = 283/593 (47%), Gaps = 55/593 (9%)

Query: 83   SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
            S+L+      D   G++ H   + SG   D  V+ +L+ +Y +  ++   R++FD   ++
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 143  N--VVSWTSLLSGYAR--NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
            N  +V+W ++LS  A   +K +D    LF  ++   +     T + V  +       + +
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDG-FHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS 779

Query: 199  VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
              +H   +K G +    V  AL+++Y K  ++R+AR +FDGM  RD + WN M+  YV  
Sbjct: 780  ESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDT 839

Query: 259  ELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
             L  EA   F  F+  G    ++T  T   V+K      EL+  +               
Sbjct: 840  CLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFK--------------- 884

Query: 316  NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
                    AY        A+K+F    +  DV+ W   +S  LQ G    AV+ F  M  
Sbjct: 885  --------AY--------ATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMIN 928

Query: 376  EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
              V  +G T+ ++LT    ++      Q+H  ++++  ++  SVG  L+N YVK G +  
Sbjct: 929  SRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSR 988

Query: 432  AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
            A  VF  ++E D+++W+ M++G    G  E +V ++  L  + + P++FT +SV+ AC++
Sbjct: 989  ARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSS 1048

Query: 492  PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
                     Q HAC++KA +     VS+AL+ +YSK+G +E A  +F  Q   DL SWN+
Sbjct: 1049 LEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNA 1108

Query: 552  MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV--DEGQQYFDIMVN 609
            ++ GY   G   KAL ++  M+      D IT +    A    GLV   +G+Q   ++V 
Sbjct: 1109 IMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAA--GGLVGLKQGKQIHAVVVK 1166

Query: 610  EH---HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
                  ++ T    S ++D+Y + G +E A  + + +P +     W T+++ C
Sbjct: 1167 RGFNLDLFVT----SGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGC 1214



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/622 (27%), Positives = 290/622 (46%), Gaps = 44/622 (7%)

Query: 32   QSLFDRSP--QRNFVEYNRLLFEYCR--DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
            + LFD +P   R+ V +N +L       D  H +  +LF  +RR  +     TL+ V K 
Sbjct: 711  RKLFDTTPDTNRDLVTWNAILSALAAHADKSH-DGFHLFRLLRRSVVSTTRHTLAPVFKM 769

Query: 88   CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
            C           +H   VK G   DV V+ +LV++Y +   + + R +FD M   +VV W
Sbjct: 770  CLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLW 829

Query: 148  TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
              ++  Y    +    + LF      G +P+  T  T+                 + V+K
Sbjct: 830  NVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL-----------------SRVVK 872

Query: 208  NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
                     C   I    + K       ++D  +  D I WN  ++ ++      EA + 
Sbjct: 873  ---------CKKNILELKQFKAYATKLFMYDD-DGSDVIVWNKALSRFLQRGEAWEAVDC 922

Query: 268  FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            F +M  +       TFV ++ + A    L L +Q+H  V+++G+D   ++   L+  Y K
Sbjct: 923  FVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVK 982

Query: 328  CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
             G +  A  +F  M E+ D++SW  MISG   +G  + +V  F  + R+ + P+ FT + 
Sbjct: 983  AGSVSRARSVFGQMNEV-DLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVAS 1041

Query: 388  ILTAQPAVS-----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L A  ++        Q+HA  +K        V TAL++ Y K+G ++EA  +F   D  
Sbjct: 1042 VLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGF 1101

Query: 443  DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV--EQGK 500
            D+ +W+A++ GY   GD   A+++Y  +   G + ++ T   ++NA  A    V  +QGK
Sbjct: 1102 DLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQIT---LVNAAKAAGGLVGLKQGK 1158

Query: 501  QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
            Q HA  +K   N  L V+S ++ MY K G +ESA  VF      D V+W +MI G  ++G
Sbjct: 1159 QIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENG 1218

Query: 561  HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
              + AL  + +MR   ++ D  TF  ++ AC+    +++G+Q    +V  +  +      
Sbjct: 1219 QEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMT 1278

Query: 621  SCMVDLYSRAGMLEKAMDIINR 642
            S +VD+Y++ G +E A  +  R
Sbjct: 1279 S-LVDMYAKCGNIEDARGLFKR 1299



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 206/415 (49%), Gaps = 11/415 (2%)

Query: 30   KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
            + +S+F +  + + + +N ++       L + ++ +F+ + R  L     T++SVL+ C 
Sbjct: 988  RARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACS 1047

Query: 90   CL-FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L   +    Q+H   +K+G   D  VST+L+D+Y +   +E+   +F + +  ++ SW 
Sbjct: 1048 SLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWN 1107

Query: 149  SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA--TAVQVHTMVI 206
            +++ GY  +    + L L+  MQ  G + +  T   V    A  G+V      Q+H +V+
Sbjct: 1108 AIMHGYIVSGDFPKALRLYILMQESGERSDQITL--VNAAKAAGGLVGLKQGKQIHAVVV 1165

Query: 207  KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            K G  +   V + ++ MYLK   +  AR VF  +   D + W +M++G V N     A  
Sbjct: 1166 KRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALF 1225

Query: 267  TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            T++ M L+  +    TF +++K C+    L   RQ+H+ ++K    FD  + T L+  Y+
Sbjct: 1226 TYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYA 1285

Query: 327  KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
            KCG +EDA  +F      + + SW AMI G  Q+G    A+ FF  M   GV P+  T+ 
Sbjct: 1286 KCGNIEDARGLFKRT-NTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFI 1344

Query: 387  IILTA---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVF 436
             +L+A      VS    + + ++ NY  E      + L++A  + G ++EA KV 
Sbjct: 1345 GVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVI 1399



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 158/321 (49%), Gaps = 6/321 (1%)

Query: 27   YSKKDQS-----LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
            YSK+ +      LF      +   +N ++  Y       +AL L++ ++  G      TL
Sbjct: 1082 YSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITL 1141

Query: 82   SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
             +  K  G L     G+Q+H   VK GF  D+ V++ ++D+Y++   +E  RRVF ++  
Sbjct: 1142 VNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPS 1201

Query: 142  SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
             + V+WT+++SG   N   +  L  +H+M++  ++P+ +TF+T++   +    +    Q+
Sbjct: 1202 PDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQI 1261

Query: 202  HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
            H  ++K        V  +L+ MY K   + DAR +F     R   +WN+M+ G   +   
Sbjct: 1262 HANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNA 1321

Query: 262  MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTG 320
             EA + F  M   G    R TF+ V+  C+ +  +  A +    + KN GI+ +    + 
Sbjct: 1322 KEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSC 1381

Query: 321  LMVAYSKCGKMEDASKIFSMM 341
            L+ A S+ G++E+A K+ S M
Sbjct: 1382 LVDALSRAGRIEEAEKVISSM 1402



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/398 (21%), Positives = 178/398 (44%), Gaps = 38/398 (9%)

Query: 285  SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
            S+++      +L L ++ H+++L +G   D  +   L+  Y+KCG +  A K+F    + 
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 345  -KDVVSWTAMISGHLQNGAIDL-AVNFFCQMTREGVRPNGFTYS-----IILTAQPAVSP 397
             +D+V+W A++S    +        + F  + R  V     T +      +L+A P+ S 
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 398  FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
              +H + +K   +    V  AL+N Y K G++ EA  +F+ +  +D+V W+ M+  Y   
Sbjct: 781  -SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDT 839

Query: 458  GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
                 A+ ++ +    G +P++ T  ++          +E  KQF A + K         
Sbjct: 840  CLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILEL-KQFKAYATK--------- 889

Query: 518  SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
                + MY   G+              D++ WN  +  + Q G   +A++ F +M    +
Sbjct: 890  ----LFMYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRV 931

Query: 578  EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
              DG+TF+ ++T       ++ G+Q   I++    +   +   +C++++Y +AG + +A 
Sbjct: 932  ACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRS-GLDQVVSVGNCLINMYVKAGSVSRAR 990

Query: 638  DIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLL 675
             +  +M        W T+++ C L  L+     ++V L
Sbjct: 991  SVFGQMN-EVDLISWNTMISGCTLSGLEECSVGMFVHL 1027


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 280/718 (38%), Positives = 421/718 (58%), Gaps = 20/718 (2%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M + N VS+ +L+ GY ++   D V++LF R+  EG + N F F+T+L +L        A
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             +H  + K G E    V  ALI  Y     V  AR  FD +  +D ++W  MVA Y  N
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           +   ++ + F  M + G      TF  V+K C   +   + + +H  VLK   + D  + 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
            GL+  Y+K G   D  ++F  M +  DV+ W+ MIS + Q+     AV  F QM R  V
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPK-HDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239

Query: 379 RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            PN FT++ +L +  ++   Q    VH H++K   + +  V  AL++ Y K G LD + K
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F  +  ++ V W+ M+ GY Q GD + A+ +Y+ +    V+ +E T+SSV+ AC A  A
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRAC-ASLA 358

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A+E G Q H+ S+K   +  + V +AL+ MY+K G+I++A  VF    +RD +SWN+MI 
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY+ HG   +AL+ F+ M+  +   + +TF+ +++AC++AGL+D GQ YF  MV ++ I 
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------R 660
           P MEHY+CMV L  R+G L+KA+ +I  +P   +  VWR +L AC              +
Sbjct: 479 PCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQ 538

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           ++ + P D A +VLLSN+YA T  W   A VRK M ++ VKKE G SWIE +   + F  
Sbjct: 539 ILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSV 598

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           GD SHP    I   LE L+ + + AGY PD + VL+D++D+ K+  L  HSERLA+AFGL
Sbjct: 599 GDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGL 658

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + TP+   ++I+KNLR+C DCH+ IKLISK+ +RDI++RD NRFHHF++G+CSCGDYW
Sbjct: 659 IRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 237/456 (51%), Gaps = 5/456 (1%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P RN V +  L+  Y +     E ++LF  + R G  L     +++LK    +       
Sbjct: 2   PDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAY 61

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
            +H    K G   +  V T+L+D Y    +V   R+ FD +   ++VSWT +++ YA N 
Sbjct: 62  SLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEND 121

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                L+LF  M++ G  PN FTF+ VL         +    VH  V+K   E+   V  
Sbjct: 122 RFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            L+ +Y K     D   VF+ M   D I W+ M++ Y  +    EA E F  M  A    
Sbjct: 182 GLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLP 241

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            + TF SV++ CA+ + L+L +Q+H  VLK G+D +  +   LM  Y+KCG+++++ K+F
Sbjct: 242 NQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLF 301

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
            M    ++ V+W  MI G++Q+G  D A++ +  M    V+ +  TYS +L A  +++  
Sbjct: 302 -MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+H+  +KT Y+K   VG AL++ Y K G +  A  VF+++ E+D ++W+AM++GY
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY 420

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           +  G    A+K ++ +      PN+ TF S+++AC+
Sbjct: 421 SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACS 456



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 221/442 (50%), Gaps = 7/442 (1%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD    ++ V +  ++  Y  +   Q++L LF  +R +G      T + VLK C  L   
Sbjct: 99  FDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAF 158

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+ VH   +K+ +  D+ V   L+DLY +  +  D  RVF++M + +V+ W+ ++S Y
Sbjct: 159 SVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRY 218

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A++  +   +ELF +M+   + PN FTF++VL   A    +    QVH  V+K G +   
Sbjct: 219 AQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNV 278

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V NAL+ +Y K   + ++  +F  + +R+ +TWN+M+ GYV +    +A   + NM   
Sbjct: 279 FVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLEC 338

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
             + +  T+ SV++ CA+   + L  Q+HS  LK   D D  +   L+  Y+KCG +++A
Sbjct: 339 QVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA 398

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             +F M+ E +D +SW AMISG+  +G +  A+  F  M      PN  T+  IL+A   
Sbjct: 399 RLVFDMLSE-RDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSN 457

Query: 395 VSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWS 448
                +  +  K+       E      T ++    + G LD+A K+ E I  E ++  W 
Sbjct: 458 AGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWR 517

Query: 449 AMLAGYAQIGDTEGAVKIYRQL 470
           A+L       D +  +   +Q+
Sbjct: 518 ALLGACVIHNDVDLGIMSAQQI 539



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 88/162 (54%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF   P RN V +N ++  Y +     +AL+L+  +    +     T SSVL+ C  L  
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H   +K+ + +DV V  +L+D+Y +  ++++ R VFD ++E + +SW +++SG
Sbjct: 360 MELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISG 419

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           Y+ + +    L+ F  MQ     PN  TF ++L   ++ G++
Sbjct: 420 YSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLL 461


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 295/830 (35%), Positives = 470/830 (56%), Gaps = 20/830 (2%)

Query: 27   YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
            Y +  + +F+    ++ V +  ++    ++ L +EA+ LF  +    +      LSSVL 
Sbjct: 210  YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 269

Query: 87   TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
                +     G Q+HC  +K GF  +  V   LV LY R+  +    R+F  MN  + VS
Sbjct: 270  ASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329

Query: 147  WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
            + SL+SG  +   +DR LELF +MQ + +KP+  T +++L   A  G +   +Q+H+  I
Sbjct: 330  YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389

Query: 207  KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            K G      +  +L+ +Y K   V  A   F   E  + + WN M+  Y   +   ++FE
Sbjct: 390  KAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFE 449

Query: 267  TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
             F  M + G    + T+ S+++ C +   L L  Q+H+ V+K G   +  + + L+  Y+
Sbjct: 450  IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509

Query: 327  KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
            K G++  A +I   + E  DVVSWTAMI+G++Q+     A+  F +M   G++ +   ++
Sbjct: 510  KYGQLALALRILRRLPE-DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFA 568

Query: 387  IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
              ++A   +       Q+HA      +    S+  AL++ Y + G + EA   FE I +K
Sbjct: 569  SAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK 628

Query: 443  DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            + ++W+++++G AQ G  E A++++ ++     + N FT+ S I+A  A  A ++QG+Q 
Sbjct: 629  NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISA-AASLANIKQGQQI 687

Query: 503  HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
            H+  +K   ++   VS++L+++Y+K G+I  A   F    +R+++SWN+MI GY+QHG  
Sbjct: 688  HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747

Query: 563  KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
             +AL +F+EM+   +  + +TF+GV++AC+H GLV EG  YF+ M   H + P  EHY C
Sbjct: 748  MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVC 807

Query: 623  MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHD 668
            +VDL  RAG L++AM+ I  MP  A A +WRT+L+AC               L+ L+P D
Sbjct: 808  VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPED 867

Query: 669  SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
            SA YVL+SN+YA +  W  R   RKLM DR VKKE G SWIEVKN  ++F AGD  HP +
Sbjct: 868  SATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLT 927

Query: 729  NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            NQIY  +  L+ R  + GY  D+  +L + +   K+ I   HSE+LAIAFGL++     P
Sbjct: 928  NQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIP 987

Query: 789  LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ++++KNLRVC DCH  IK +SK+  R I+VRD +RFHHF  G+CSC D+W
Sbjct: 988  IRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 186/634 (29%), Positives = 323/634 (50%), Gaps = 16/634 (2%)

Query: 21  SLRSPFYSKKDQ----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL 76
           SL   ++   DQ     +FD +  R+   +N+++  +     + +   LF  +   G+  
Sbjct: 98  SLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP 157

Query: 77  FGSTLSSVLKTC---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGR 133
            G T + VLK C      F++V  +QVH      GF     V+  L+DLY +   +E  +
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYV--KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           +VF+ +   ++V+W +++SG ++N + +  + LF  M    I P  +  S+VL       
Sbjct: 216 KVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQ 275

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
           +     Q+H +VIK G    T VCN L+++Y +S+ +  A  +F  M  RD +++NS+++
Sbjct: 276 LFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLIS 335

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           G V       A E F  M     +    T  S++  CA+   L    QLHS  +K G+  
Sbjct: 336 GLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSA 395

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  +   L+  YSKC  +E A K F +  E +++V W  M+  + Q   +  +   F QM
Sbjct: 396 DIILEGSLLDLYSKCADVETAHKFF-LTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EG+ PN FTY  IL    ++       Q+H H+IKT ++ +  V + L++ Y K G L
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL 514

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             A ++   + E D+V+W+AM+AGY Q      A++++ ++   G++ +   F+S I+AC
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
            A   A+ QG+Q HA S  A     L +++AL+++Y++ G I+ A   F++   ++ +SW
Sbjct: 575 -AGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISW 633

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           NS++ G AQ G+ ++AL+VF  M R + E +  T+   I+A      + +GQQ    MV 
Sbjct: 634 NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS-MVL 692

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +       E  + ++ LY+++G +  A    N M
Sbjct: 693 KTGYDSEREVSNSLISLYAKSGSISDAWREFNDM 726



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 180/565 (31%), Positives = 289/565 (51%), Gaps = 31/565 (5%)

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
           T G LF+ +   ++HC   KSGF  +  +  SLVD Y R  +     +VFD+ +  +V S
Sbjct: 70  TSGSLFETM---RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFS 126

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV-QVHTMV 205
           W  ++  +   K N +V  LF RM  EGI PN +TF+ VL       I    V QVH+  
Sbjct: 127 WNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRT 186

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
              G +    V N LI +Y K+  +  A+ VF+ +  +D +TW +M++G   N L  EA 
Sbjct: 187 FYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAI 246

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F +M  +    T     SV+      +   L  QLH  V+K G   +  +  GL+  Y
Sbjct: 247 LLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALY 306

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           S+  K+  A +IFS M   +D VS+ ++ISG +Q G  D A+  F +M R+ ++P+  T 
Sbjct: 307 SRSRKLISAERIFSTMNS-RDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITV 365

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +L+A  +V       Q+H+H IK        +  +LL+ Y K   ++ A K F   + 
Sbjct: 366 ASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTET 425

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           ++IV W+ ML  Y Q+ +   + +I+RQ+  EG+ PN+FT+ S++  CT+   A+  G+Q
Sbjct: 426 ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSL-GALYLGEQ 484

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H   IK      + V S L+ MY+K G +  A  + +R  + D+VSW +MI GY QH  
Sbjct: 485 IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF----------DIMVNEH 611
             +AL++F+EM  + ++FD I F   I+AC     + +GQQ            D+ +N  
Sbjct: 545 FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN-- 602

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKA 636
                    + ++ LY+R G +++A
Sbjct: 603 ---------NALISLYARCGRIQEA 618



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 250/490 (51%), Gaps = 16/490 (3%)

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           ++L + M+  G++ N   +  +L      G +   +++H  + K+G +    + ++L+  
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y +      A  VFD   +R   +WN M+  +V  + + + F  F  M   G      TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 284 VSVIKLCATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
             V+K C          +Q+HS+    G D    +   L+  YSK G +E A K+F+ + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
            MKD+V+W AMISG  QNG  + A+  FC M    + P  +  S +L+A   +  F    
Sbjct: 223 -MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 281

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+H  +IK  +     V   L+  Y +   L  A ++F  ++ +D V+++++++G  Q G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            ++ A++++ ++  + +KP+  T +S+++AC A   A+ +G Q H+ +IKA ++  + + 
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSAC-ASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
            +L+ +YSK  ++E+A + F      ++V WN M+  Y Q  +   + E+F++M+ + + 
Sbjct: 401 GSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH--YSC--MVDLYSRAGMLE 634
            +  T+  ++  CT  G +  G+Q     ++ H I    +   Y C  ++D+Y++ G L 
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQ-----IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLA 515

Query: 635 KAMDIINRMP 644
            A+ I+ R+P
Sbjct: 516 LALRILRRLP 525


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 287/761 (37%), Positives = 427/761 (56%), Gaps = 49/761 (6%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +HCE +K G   D+     L+++Y++++ + D  ++FD+M E N +S+ +L+ GYA 
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +      +ELF R+  EG + N F F+T+L +L           +H  + K G E    V
Sbjct: 117 SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFV 176

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             ALI  Y     V  AR VFDG+  +D ++W  MV  +  N+   EA + F+ M + G 
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    TF SV K C   +   + + +H   LK+  + D  +   L+  Y+K G ++DA  
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARX 296

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
            F  + + KDV+ W+ MI+ + Q+     AV  F QM +  V PN FT++ +L A   + 
Sbjct: 297 AFEEIPK-KDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATME 355

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAML 451
                 Q+H H+IK        V  AL++ Y K G ++ +  +F E     D+  W+ ++
Sbjct: 356 GLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVI 415

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            G+ Q+GD E A++++  +    V+  E T+SS + AC A  AA+E G Q H+ ++K   
Sbjct: 416 VGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC-ASLAALEPGLQIHSLTVKTTF 474

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +  + V++AL+ MY+K G+I+ A  VF    K+D VSWN+MI GY+ HG           
Sbjct: 475 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG----------- 523

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
                             AC +AGL+D+GQ YF  M+ +H I P +EHY+CMV L  R G
Sbjct: 524 -----------------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGG 566

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSN 677
            L+KA+ +I+ +PF  S  VWR +L AC               ++ ++P D A +VLLSN
Sbjct: 567 HLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSN 626

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           MYA    W   A VRK M  + VKKE G SWIE +   +SF  GD SHP+   I   LE 
Sbjct: 627 MYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEW 686

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L  + K AGY P+ + VL D++DE KE +L  HSERLA++FG++ TP+G+P++I+KNLR+
Sbjct: 687 LHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRI 746

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH  IK ISK+ +R+IVVRD NRFHHF+EGLCSCGDYW
Sbjct: 747 CVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 223/429 (51%), Gaps = 4/429 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+RN + +  L+  Y       EA+ LF+ + R G  L     +++LK    +  
Sbjct: 95  LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDC 154

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  +H    K G   +  V T+L+D Y     V+  R VFD +   ++VSWT +++ 
Sbjct: 155 GELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTC 214

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +A N      L+LF +M++ G KPN+FTF++V               VH   +K+  E+ 
Sbjct: 215 FAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELD 274

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL+ +Y KS  + DAR  F+ +  +D I W+ M+A Y  ++   EA E F  M  
Sbjct: 275 LYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQ 334

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           A     + TF SV++ CAT + L L  Q+H  V+K G+  D  +   LM  Y+KCG+ME+
Sbjct: 335 ALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMEN 394

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           +  +F+      DV  W  +I GH+Q G  + A+  F  M    V+    TYS  L A  
Sbjct: 395 SMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACA 454

Query: 392 -QPAVSP-FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
              A+ P  Q+H+  +KT ++K   V  AL++ Y K G + +A  VF+L++++D V+W+A
Sbjct: 455 SLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNA 514

Query: 450 MLAGYAQIG 458
           M++GY+  G
Sbjct: 515 MISGYSMHG 523



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 204/387 (52%), Gaps = 7/387 (1%)

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           +E     + + ++ C    E    + LH ++LK G   D      L+  Y K   + DAS
Sbjct: 34  SEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDAS 93

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           K+F  M E ++ +S+  +I G+ ++     A+  F ++ REG   N F ++ IL    ++
Sbjct: 94  KLFDEMPE-RNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSM 152

Query: 396 S----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                 + +HA I K  +E +  VGTAL++AY   G +D A +VF+ I  KD+V+W+ M+
Sbjct: 153 DCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMV 212

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
             +A+    + A+K++ Q+   G KPN FTF+SV  AC     A + GK  H C++K++ 
Sbjct: 213 TCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLE-AFDVGKSVHGCALKSRY 271

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
              L V  AL+ +Y+K G+I+ A   F+   K+D++ W+ MI  YAQ   +K+A+E+F +
Sbjct: 272 ELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQ 331

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           MR+  +  +  TF  V+ AC     ++ G Q     V +  ++  +   + ++D+Y++ G
Sbjct: 332 MRQALVLPNQFTFASVLQACATMEGLNLGNQ-IHCHVIKIGLHSDVFVSNALMDVYAKCG 390

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAA 658
            +E +M +    P     T W TV+  
Sbjct: 391 RMENSMXLFAESPHRNDVTPWNTVIVG 417



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 208/432 (48%), Gaps = 26/432 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD    ++ V +  ++  +  +   +EAL LF  +R +G      T +SV K C  L
Sbjct: 194 REVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGL 253

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH   +KS +  D+ V  +L+DLY ++ +++D R  F+++ + +V+ W+ ++
Sbjct: 254 EAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMI 313

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + YA++  +   +E+F +M+   + PN FTF++VL   A    +    Q+H  VIK G  
Sbjct: 314 ARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLH 373

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT-WNSMVAGYVTNELHMEAFETFNN 270
               V NAL+ +Y K   + ++  +F     R+ +T WN+++ G+V      +A   F N
Sbjct: 374 SDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLN 433

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M     + T  T+ S ++ CA+   L    Q+HS  +K   D D  +   L+  Y+KCG 
Sbjct: 434 MLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGS 493

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA  +F +M + +D VSW AMISG+  +G   LA          G+   G  Y   + 
Sbjct: 494 IKDARLVFDLMNK-QDEVSWNAMISGYSMHG---LAC------ANAGLLDQGQAYFTSMI 543

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSA 449
               + P   H               T ++    + G LD+A K+ + I  +  ++ W A
Sbjct: 544 QDHGIEPCIEHY--------------TCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRA 589

Query: 450 MLAGYAQIGDTE 461
           +L       D E
Sbjct: 590 LLGACVIHNDIE 601


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 294/830 (35%), Positives = 469/830 (56%), Gaps = 20/830 (2%)

Query: 27   YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
            Y +  + +F+    ++ V +  ++    ++ L +EA+ LF  +    +      LSSVL 
Sbjct: 210  YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 269

Query: 87   TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
                +     G Q+HC  +K GF  +  V   LV LY R+  +    R+F  MN  + VS
Sbjct: 270  ASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329

Query: 147  WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
            + SL+SG  +   +DR LELF +MQ + +KP+  T +++L   A  G +   +Q+H+  I
Sbjct: 330  YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389

Query: 207  KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            K G      +  +L+ +Y K   V  A   F   E  + + WN M+  Y   +   ++FE
Sbjct: 390  KAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFE 449

Query: 267  TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
             F  M + G    + T+ S+++ C +   L L  Q+H+ V+K G   +  + + L+  Y+
Sbjct: 450  IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA 509

Query: 327  KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
            K G++  A +I   + E  DVVSWTAMI+G++Q+     A+  F +M   G++ +   ++
Sbjct: 510  KYGQLALALRILRRLPE-DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFA 568

Query: 387  IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
              ++A   +       Q+HA      +    S+  AL++ Y + G + EA   FE I +K
Sbjct: 569  SAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK 628

Query: 443  DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            + ++W+++++G AQ G  E A++++ ++     + N FT+ S I+A  A  A ++QG+Q 
Sbjct: 629  NNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISA-AASLANIKQGQQI 687

Query: 503  HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
            H+  +K   ++   VS++L+++Y+K G+I  A   F    +R+++SWN+MI GY+QHG  
Sbjct: 688  HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747

Query: 563  KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
             +AL +F+EM+   +  + +TF+GV++AC+H GLV EG  YF+ M   H + P  EHY C
Sbjct: 748  MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVC 807

Query: 623  MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHD 668
            +VDL  RAG L++AM+ I  MP  A A +WRT+L+AC               L+ L+P D
Sbjct: 808  VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPED 867

Query: 669  SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
            SA YVL+SN+YA +  W  R   RKLM D  VKKE G SWIEVKN  ++F AGD  HP +
Sbjct: 868  SATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLT 927

Query: 729  NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            NQIY  +  L+ R  + GY  D+  +L + +   K+ I   HSE+LAIAFGL++     P
Sbjct: 928  NQIYEYIGHLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIP 987

Query: 789  LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ++++KNLRVC DCH  IK +SK+  R I+VRD +RFHHF  G+CSC D+W
Sbjct: 988  IRVMKNLRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 186/634 (29%), Positives = 323/634 (50%), Gaps = 16/634 (2%)

Query: 21  SLRSPFYSKKDQ----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL 76
           SL   ++   DQ     +FD +  R+   +N+++  +     + +   LF  +   G+  
Sbjct: 98  SLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITP 157

Query: 77  FGSTLSSVLKTC---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGR 133
            G T + VLK C      F++V  +QVH      GF     V+  L+DLY +   +E  +
Sbjct: 158 NGYTFAGVLKACVGGDIAFNYV--KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAK 215

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           +VF+ +   ++V+W +++SG ++N + +  + LF  M    I P  +  S+VL       
Sbjct: 216 KVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQ 275

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
           +     Q+H +VIK G    T VCN L+++Y +S+ +  A  +F  M  RD +++NS+++
Sbjct: 276 LFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLIS 335

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           G V       A E F  M     +    T  S++  CA+   L    QLHS  +K G+  
Sbjct: 336 GLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSA 395

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  +   L+  YSKC  +E A K F +  E +++V W  M+  + Q   +  +   F QM
Sbjct: 396 DIILEGSLLDLYSKCADVETAHKFF-LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EG+ PN FTY  IL    ++       Q+H H+IKT ++ +  V + L++ Y K G L
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQL 514

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             A ++   + E D+V+W+AM+AGY Q      A++++ ++   G++ +   F+S I+AC
Sbjct: 515 ALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
            A   A+ QG+Q HA S  A     L +++AL+++Y++ G I+ A   F++   ++ +SW
Sbjct: 575 -AGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISW 633

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           NS++ G AQ G+ ++AL+VF  M R + E +  T+   I+A      + +GQQ    MV 
Sbjct: 634 NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS-MVL 692

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +       E  + ++ LY+++G +  A    N M
Sbjct: 693 KTGYDSEREVSNSLISLYAKSGSISDAWREFNDM 726



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 180/565 (31%), Positives = 289/565 (51%), Gaps = 31/565 (5%)

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
           T G LF+ +   ++HC   KSGF  +  +  SLVD Y R  +     +VFD+ +  +V S
Sbjct: 70  TSGSLFETM---RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFS 126

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV-QVHTMV 205
           W  ++  +   K N +V  LF RM  EGI PN +TF+ VL       I    V QVH+  
Sbjct: 127 WNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRT 186

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
              G +    V N LI +Y K+  +  A+ VF+ +  +D +TW +M++G   N L  EA 
Sbjct: 187 FYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAI 246

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F +M  +    T     SV+      +   L  QLH  V+K G   +  +  GL+  Y
Sbjct: 247 LLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALY 306

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           S+  K+  A +IFS M   +D VS+ ++ISG +Q G  D A+  F +M R+ ++P+  T 
Sbjct: 307 SRSRKLISAERIFSTMNS-RDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITV 365

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +L+A  +V       Q+H+H IK        +  +LL+ Y K   ++ A K F   + 
Sbjct: 366 ASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTET 425

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           ++IV W+ ML  Y Q+ +   + +I+RQ+  EG+ PN+FT+ S++  CT+   A+  G+Q
Sbjct: 426 ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSL-GALYLGEQ 484

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H   IK      + V S L+ MY+K G +  A  + +R  + D+VSW +MI GY QH  
Sbjct: 485 IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDM 544

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF----------DIMVNEH 611
             +AL++F+EM  + ++FD I F   I+AC     + +GQQ            D+ +N  
Sbjct: 545 FSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN-- 602

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKA 636
                    + ++ LY+R G +++A
Sbjct: 603 ---------NALISLYARCGRIQEA 618



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 250/490 (51%), Gaps = 16/490 (3%)

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           ++L + M+  G++ N   +  +L      G +   +++H  + K+G +    + ++L+  
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y +      A  VFD   +R   +WN M+  +V  + + + F  F  M   G      TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 284 VSVIKLCATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
             V+K C          +Q+HS+    G D    +   L+  YSK G +E A K+F+ + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
            MKD+V+W AMISG  QNG  + A+  FC M    + P  +  S +L+A   +  F    
Sbjct: 223 -MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGE 281

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+H  +IK  +     V   L+  Y +   L  A ++F  ++ +D V+++++++G  Q G
Sbjct: 282 QLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQG 341

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            ++ A++++ ++  + +KP+  T +S+++AC A   A+ +G Q H+ +IKA ++  + + 
Sbjct: 342 FSDRALELFTKMQRDCLKPDCITVASLLSAC-ASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
            +L+ +YSK  ++E+A + F      ++V WN M+  Y Q  +   + E+F++M+ + + 
Sbjct: 401 GSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH--YSC--MVDLYSRAGMLE 634
            +  T+  ++  CT  G +  G+Q     ++ H I    +   Y C  ++D+Y++ G L 
Sbjct: 461 PNQFTYPSILRTCTSLGALYLGEQ-----IHTHVIKTGFQLNVYVCSVLIDMYAKYGQLA 515

Query: 635 KAMDIINRMP 644
            A+ I+ R+P
Sbjct: 516 LALRILRRLP 525


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 305/829 (36%), Positives = 470/829 (56%), Gaps = 54/829 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + LF+  P R+ V +N +L  Y      +EA++L       GL     TL       
Sbjct: 204 KEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLR------ 257

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L   + G       VKS                      E+G    D    S ++S  
Sbjct: 258 --LLSRISGDDSEAGQVKS---------------------FENGN---DASAVSEIISRN 291

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            +LSGY        +L+ F  M    ++ +  TF  VL        +A   QVH M +K 
Sbjct: 292 KILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKL 351

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +++ +V N+LI+MY K + +  AR VF+ M +RD I+WNS++AG   ++L +EA   F
Sbjct: 352 GLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLF 411

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
             +   G +    T  SV+K  ++  E L L++Q+H   +K     D  + T L+ AYS+
Sbjct: 412 MQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSR 471

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
              M++A  +F   R   D+V+W AM+SG+ Q+      +  F  M ++G R + FT + 
Sbjct: 472 NRCMKEAEVLFG--RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLAT 529

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L     +       QVHA+ IK+ Y+    V + +L+ YVK G +  A   F+ I   D
Sbjct: 530 VLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 589

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            VAW+ +++G  + G+ E A+ ++ Q+   GV P+EFT +++  A +  +A +EQG+Q H
Sbjct: 590 DVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTA-LEQGRQIH 648

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A ++K    +   V ++LV MY+K G+I+ A  +FKR    ++ +WN+M+ G AQHG  K
Sbjct: 649 ANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGK 708

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +AL++FK+M    ++ D +TFIGV++AC+H+GLV E  +Y   M  ++ I P +EHYSC+
Sbjct: 709 EALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCL 768

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
            D   RAG++++A ++I+ M   ASA+++RT+LAACR              L+ L+P DS
Sbjct: 769 ADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDS 828

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
           + YVLLSNMYAA   W E    R +M   KVKK+ G+SWIEVKNK + F+  D S+PQ+ 
Sbjct: 829 SAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTE 888

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            IY K++++   +K  GY P+T + L D+++E KE  L  HSE+LA+AFGL++TP   P+
Sbjct: 889 LIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPI 948

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +++KNLRVCGDCH  +K ISK+  R+IV+RD NRFH FK+G+CSCGDYW
Sbjct: 949 RVIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 174/635 (27%), Positives = 307/635 (48%), Gaps = 51/635 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLH-----QEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +FD+ P+R+ V +N +L  Y + S       +EA  LF  +R+  +     TLS +LK C
Sbjct: 103 VFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLC 162

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                       H    K G   D  V+ +LV++Y++   V++GR +F++M   +VV W 
Sbjct: 163 LHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWN 222

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            +L  Y      +  ++L       G+ PN  T   +  +  D+   + A QV +   +N
Sbjct: 223 LMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDD---SEAGQVKS--FEN 277

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G                      DA AV       + I+ N +++GY+    +    + F
Sbjct: 278 GN---------------------DASAV------SEIISRNKILSGYLHAGQYSALLKCF 310

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +M  +  E  + TF+ V+        L L +Q+H   LK G+D    +   L+  Y K 
Sbjct: 311 MDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKL 370

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            K+  A  +F+ M E +D++SW ++I+G  Q+     AV  F Q+ R G++P+ +T + +
Sbjct: 371 RKIGLARTVFNNMSE-RDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSV 429

Query: 389 LTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           L A  ++        Q+H H IKTN      V TAL++AY +   + EA  +F   +  D
Sbjct: 430 LKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFD 488

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +VAW+AM++GY Q  D    ++++  +  +G + ++FT ++V+  C     A+ QGKQ H
Sbjct: 489 LVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTC-GFLFAINQGKQVH 547

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A +IK+  +  L VSS ++ MY K G++ +A   F      D V+W ++I G  ++G  +
Sbjct: 548 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEE 607

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--S 621
           +AL VF +MR   +  D  T   +  A +    +++G+Q   I  N   +  T + +  +
Sbjct: 608 RALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ---IHANALKLNCTSDPFVGT 664

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
            +VD+Y++ G ++ A  +  R+    + T W  +L
Sbjct: 665 SLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAML 698



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 251/560 (44%), Gaps = 63/560 (11%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE-------LFHRM 170
           +L+ +Y +  ++   RRVFD M E ++VSW S+L+ YA++  ++ V+E       LF  +
Sbjct: 86  NLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQS--SEGVVENVKEAFLLFRIL 143

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           + + +  +  T S +L +    G V  +   H    K G +    V  AL+++YLK   V
Sbjct: 144 RQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKV 203

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           ++ R +F+ M  RD + WN M+  Y+      EA +  +    +G      T   + ++ 
Sbjct: 204 KEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRIS 263

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
               E   A Q+ S   +NG                      DAS +        +++S 
Sbjct: 264 GDDSE---AGQVKS--FENG---------------------NDASAV-------SEIISR 290

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
             ++SG+L  G     +  F  M    +  +  T+ ++L     +       QVH   +K
Sbjct: 291 NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
              +   +V  +L+N Y K   +  A  VF  + E+D+++W++++AG AQ      AV +
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + QL   G+KP+ +T +SV+ A ++    +   KQ H  +IK        VS+AL+  YS
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYS 470

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           +   ++ A  +F R    DLV+WN+M+ GY Q     K LE+F  M +Q    D  T   
Sbjct: 471 RNRCMKEAEVLFGRN-NFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLAT 529

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-------SCMVDLYSRAGMLEKAMDI 639
           V+  C     +++G+Q         H Y     Y       S ++D+Y + G +  A   
Sbjct: 530 VLKTCGFLFAINQGKQV--------HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 581

Query: 640 INRMPFAASATVWRTVLAAC 659
            + +P       W T+++ C
Sbjct: 582 FDSIP-VPDDVAWTTLISGC 600



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 205/463 (44%), Gaps = 55/463 (11%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN-----ELHMEAFETFNNMG 272
           N LISMY K   +  AR VFD M +RD ++WNS++A Y  +     E   EAF  F  + 
Sbjct: 85  NNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILR 144

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                 +R T   ++KLC  +  +  +   H    K G+D D  +   L+  Y K GK++
Sbjct: 145 QDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVK 204

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +   +F  M   +DVV W  M+  +L+ G  + A++        G+ PN  T  ++    
Sbjct: 205 EGRVLFEEM-PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLL---- 259

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 ++     +    KSF  G             ++A+ V E+I    I      L+
Sbjct: 260 -----SRISGDDSEAGQVKSFENG-------------NDASAVSEIISRNKI------LS 295

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GY   G     +K +  +    ++ ++ TF  V+ A      ++  G+Q H  ++K  L+
Sbjct: 296 GYLHAGQYSALLKCFMDMVESDLECDQVTFILVL-ATAVRLDSLALGQQVHCMALKLGLD 354

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             L VS++L+ MY K   I  A  VF    +RDL+SWNS+I G AQ     +A+ +F ++
Sbjct: 355 LMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQL 414

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH-------YSCMVD 625
            R  L+ D  T   V+ A   A  + EG      +  + H++    +        + ++D
Sbjct: 415 LRCGLKPDHYTMTSVLKA---ASSLPEGLS----LSKQIHVHAIKTNNVADSFVSTALID 467

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHD 668
            YSR   +++A  +  R  F   A  W  +++       Q HD
Sbjct: 468 AYSRNRCMKEAEVLFGRNNFDLVA--WNAMMSG----YTQSHD 504



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 43/320 (13%)

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
           +T +L L +  H+++L    + +  +   L+  YSKCG +  A ++F  M E +D+VSW 
Sbjct: 58  STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPE-RDLVSWN 116

Query: 352 AMISGHLQNGA-----IDLAVNFFCQMTREGVRPNGFTYS----IILTAQPAVSPFQVHA 402
           ++++ + Q+       +  A   F  + ++ V  +  T S    + L +    +    H 
Sbjct: 117 SILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHG 176

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           +  K   +    V  AL+N Y+K G + E   +FE +  +D+V W+ ML  Y ++G  E 
Sbjct: 177 YACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 236

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ +     + G+ PNE T   +++  +   +   Q K F                    
Sbjct: 237 AIDLSSAFHTSGLHPNEITL-RLLSRISGDDSEAGQVKSF-------------------- 275

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
               + GN  SA          +++S N ++ GY   G     L+ F +M   DLE D +
Sbjct: 276 ----ENGNDASAVS--------EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQV 323

Query: 583 TFIGVITACTHAGLVDEGQQ 602
           TFI V+        +  GQQ
Sbjct: 324 TFILVLATAVRLDSLALGQQ 343


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 310/847 (36%), Positives = 492/847 (58%), Gaps = 50/847 (5%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL--------FGSTLSS 83
            +S+FDR   RN + +N ++  Y R      A +LF  +++ GL          FGS +++
Sbjct: 703  RSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITA 762

Query: 84   VLKTCG---CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
               +     C+ + +  R       KSGF +D+ V ++LV  + R    +D + +F+ M 
Sbjct: 763  ACSSVDFGLCVLEQMLAR-----VEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMG 817

Query: 141  ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA---- 196
              NVVS   L+ G  + K  +   ++FH M+ + +  NS ++  +L   ++  ++     
Sbjct: 818  VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRR 876

Query: 197  TAVQVHTMVIKNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
               +VH  VI+ G  +   ++ N L++MY KS  + DA +VF+ M ++DS++WNS+++G 
Sbjct: 877  KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 936

Query: 256  VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
              NE   +A E+F  M   G+  +  T +S +  CA+   + L  Q+H   LK G+D D 
Sbjct: 937  DQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 996

Query: 316  NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN--GAIDLAVNFFCQM 373
            ++   L+  Y++ G   +  K+FS+M E  D VSW ++I G L +   ++  AV +F +M
Sbjct: 997  SVSNALLALYAETGCFTECLKVFSLMPEY-DQVSWNSVI-GALSDSEASVSQAVKYFLEM 1054

Query: 374  TREGVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             R G   +  T+  IL+A  ++S      Q+HA ++K       ++G ALL+ Y K G +
Sbjct: 1055 MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEM 1114

Query: 430  DEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
            +E  K+F  + E +D V+W++M++GY        A+ +   +  +G + + FTF++V++A
Sbjct: 1115 NECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSA 1174

Query: 489  CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
            C A  A +E+G + HAC I+A + + + V SALV MYSK G I+ AS  F+    R++ S
Sbjct: 1175 C-ASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYS 1233

Query: 549  WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT-FIGVITACTHAGLVDEGQQYFDIM 607
            WNSMI GYA+HGH +KAL++F  M       D +   +GV++AC+H G V+EG ++F  M
Sbjct: 1234 WNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSM 1293

Query: 608  VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC-------- 659
               + + P +EH+SCMVDL  RAG L++  D IN MP   +  +WRTVL AC        
Sbjct: 1294 SEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNT 1353

Query: 660  --------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                     L+ L+P ++  YVLL+NMYA+   W++ A+ R  M +  VKKEAG SW+ +
Sbjct: 1354 ELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSWVTM 1413

Query: 712  KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
            K+  + F+AGD  HP+ + IY KL EL+ +++DAGY P T Y L D++ E+KE +LS HS
Sbjct: 1414 KDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHS 1473

Query: 772  ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
            E++A+AF L    A  P++I+KNLRVCGDCH+    ISK+  R IV+RD+NRFHHF++G 
Sbjct: 1474 EKIAVAFVLTRQSA-LPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGK 1532

Query: 832  CSCGDYW 838
            CSCGDYW
Sbjct: 1533 CSCGDYW 1539



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 196/724 (27%), Positives = 342/724 (47%), Gaps = 91/724 (12%)

Query: 97   GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
             R++H + +K GF  ++ +S +L+++Y+R  ++   +++FD+M+  N+V+W  L+SGY +
Sbjct: 563  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622

Query: 157  NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT--AVQVHTMVIKN--GGEV 212
            N   D     F  M   G  PN + F + L    + G       VQ+H ++ K   G +V
Sbjct: 623  NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682

Query: 213  VTSVCNALISMYLKS-KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V  VCN LISMY        DAR+VFD +  R+SI+WNS+++ Y      + A++ F++M
Sbjct: 683  V--VCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSM 740

Query: 272  GLAGAELT----RSTFVSVIKLCATTKELRLA--RQLHSQVLKNGIDFDHNIRTGLMVAY 325
               G   +      TF S+I    ++ +  L    Q+ ++V K+G   D  + + L+  +
Sbjct: 741  QKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGF 800

Query: 326  SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            ++ G  +DA  IF  M  +++VVS   ++ G ++    + A   F +M ++ V  N  +Y
Sbjct: 801  ARFGLTDDAKNIFEQM-GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSY 858

Query: 386  SIILTAQPAVSPF--------QVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVF 436
             ++L+A    S          +VHAH+I+T   +   ++G  L+N Y K G + +A  VF
Sbjct: 859  VVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF 918

Query: 437  ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            EL+ EKD V+W+++++G  Q   +E A + + ++   G  P+ FT  S +++C A    +
Sbjct: 919  ELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSC-ASLGWI 977

Query: 497  EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
              G+Q H   +K  L+  + VS+AL+ +Y++ G      +VF    + D VSWNS+I   
Sbjct: 978  MLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGAL 1037

Query: 557  A-QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV------- 608
            +       +A++ F EM R       +TFI +++A +   L +   Q   +++       
Sbjct: 1038 SDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDD 1097

Query: 609  -----------------NE-HHIYPTMEH------YSCMVDLYSRAGMLEKAMDIINRM- 643
                             NE   I+  M        ++ M+  Y    +L KAMD++  M 
Sbjct: 1098 TAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM 1157

Query: 644  ----------------PFAASATVWRTV-LAACRLISLQPHDSAIYVLLSNMYAATGHWQ 686
                              A+ AT+ R + + AC + +    D  +   L +MY+  G   
Sbjct: 1158 QKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRID 1217

Query: 687  ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
              +R  +LM  R V     YSW        S ++G   H        K  +L TR+   G
Sbjct: 1218 YASRFFELMPLRNV-----YSW-------NSMISGYARHGHG----EKALKLFTRMMLDG 1261

Query: 747  YKPD 750
              PD
Sbjct: 1262 QPPD 1265



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 188/647 (29%), Positives = 307/647 (47%), Gaps = 50/647 (7%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
            Q LFD    RN V +  L+  Y ++    EA   F  + R G         S L+ C   
Sbjct: 599  QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 658

Query: 89   ---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT-NNVEDGRRVFDDMNESNV 144
               GC      G Q+H    K+ +  DV V   L+ +Y    ++  D R VFD +   N 
Sbjct: 659  GPSGC----KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNS 714

Query: 145  VSWTSLLSGYARNKMNDRVLELFHRMQVEGI----KPNSFTFSTVLGVLA---DEGIVAT 197
            +SW S++S Y+R        +LF  MQ EG+    KPN +TF +++       D G+   
Sbjct: 715  ISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVL 774

Query: 198  AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
              Q+   V K+G      V +AL+S + +  +  DA+ +F+ M  R+ ++ N ++ G V 
Sbjct: 775  E-QMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVK 833

Query: 258  NELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKEL----RLARQLHSQVLKNGI- 311
             +    A + F+ M  L G  +   ++V ++   +    L    R  R++H+ V++ G+ 
Sbjct: 834  QKQGEAAAKVFHEMKDLVG--INSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLN 891

Query: 312  DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
            D    I  GL+  Y+K G + DA  +F +M E KD VSW ++ISG  QN   + A   F 
Sbjct: 892  DNKVAIGNGLVNMYAKSGAIADACSVFELMVE-KDSVSWNSLISGLDQNECSEDAAESFL 950

Query: 372  QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
            +M R G  P+ FT    L++  ++       Q+H   +K   +   SV  ALL  Y + G
Sbjct: 951  RMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETG 1010

Query: 428  ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG----AVKIYRQLTSEGVKPNEFTFS 483
               E  KVF L+ E D V+W++++     + D+E     AVK + ++   G   +  TF 
Sbjct: 1011 CFTECLKVFSLMPEYDQVSWNSVIGA---LSDSEASVSQAVKYFLEMMRGGWGLSRVTFI 1067

Query: 484  SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
            ++++A ++ S   E   Q HA  +K  L++   + +AL++ Y K G +    ++F R  +
Sbjct: 1068 NILSAVSSLSLH-EVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE 1126

Query: 544  -RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
             RD VSWNSMI GY  +    KA+++   M ++    D  TF  V++AC     ++ G +
Sbjct: 1127 TRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGME 1186

Query: 603  YFDIMVNEHHIYPTMEH----YSCMVDLYSRAGMLEKAMDIINRMPF 645
                 V+   I   ME      S +VD+YS+ G ++ A      MP 
Sbjct: 1187 -----VHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPL 1228



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 243/499 (48%), Gaps = 23/499 (4%)

Query: 178  NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
            +S TF +++           A ++H   IK G      + N LI++Y++   +  A+ +F
Sbjct: 543  SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLF 602

Query: 238  DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-- 295
            D M +R+ +TW  +++GY  N    EA   F +M  AG       F S ++ C  +    
Sbjct: 603  DEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSG 662

Query: 296  LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKMEDASKIFSMMREMKDVVSWTAMI 354
             +L  Q+H  + K     D  +   L+  Y  C     DA  +F  +  +++ +SW ++I
Sbjct: 663  CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRI-GIRNSISWNSII 721

Query: 355  SGHLQNGAIDLAVNFFCQMTREGV----RPNGFTYSIILTAQPAVSPF------QVHAHI 404
            S + + G    A + F  M +EG+    +PN +T+  ++TA  +   F      Q+ A +
Sbjct: 722  SVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARV 781

Query: 405  IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
             K+ + +   VG+AL++ + + G+ D+A  +FE +  +++V+ + ++ G  +    E A 
Sbjct: 782  EKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAA 841

Query: 465  KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE---QGKQFHACSIKAKLN-NALCVSSA 520
            K++ ++  + V  N  ++  +++A +  S   E   +G++ HA  I+  LN N + + + 
Sbjct: 842  KVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNG 900

Query: 521  LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
            LV MY+K G I  A  VF+   ++D VSWNS+I G  Q+  ++ A E F  MRR      
Sbjct: 901  LVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPS 960

Query: 581  GITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
              T I  +++C   G +  G+Q + D +  +  +   +   + ++ LY+  G   + + +
Sbjct: 961  NFTLISTLSSCASLGWIMLGEQIHCDGL--KLGLDTDVSVSNALLALYAETGCFTECLKV 1018

Query: 640  INRMPFAASATVWRTVLAA 658
             + MP       W +V+ A
Sbjct: 1019 FSLMP-EYDQVSWNSVIGA 1036


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/849 (34%), Positives = 480/849 (56%), Gaps = 56/849 (6%)

Query: 44   VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
            V +N ++  Y +    +EA  +F  + ++G+     T +S L+ CG L     G+QVH +
Sbjct: 242  VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSK 301

Query: 104  CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
             +  GF  D  V  +L+D+Y + ++ E   +VFD+M E N V+W S++S  A+    +  
Sbjct: 302  LIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDA 361

Query: 164  LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
            L LF RMQ  G K N F   ++L   A    +    ++H  +++N       + +AL+ M
Sbjct: 362  LVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDM 421

Query: 224  YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRST 282
            Y K  MV +A  VF  + +R+ +++N+++AGYV      EA E +++M    G +  + T
Sbjct: 422  YSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFT 481

Query: 283  FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
            F +++ LCA  +     RQ+H+ +++  I  +  + T L+  YS+CG++  A +IF+ M 
Sbjct: 482  FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541

Query: 343  EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
            E ++  SW +MI G+ QNG    A+  F QM   G++P+ F+ S +L++  ++S  Q   
Sbjct: 542  E-RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR 600

Query: 400  -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA------------ 446
             +H  I++   E+   +   L++ Y K G +D A KV++   +KD++             
Sbjct: 601  ELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSG 660

Query: 447  -------------------WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
                               W+++LAGYA  G  + +   + ++    ++ +  T  +++N
Sbjct: 661  RANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVN 720

Query: 488  ACTAPSAAVEQGKQFHACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
             C++   A+E G Q H+  IK   +N ++ + +ALV MYSK G I  A  VF     +++
Sbjct: 721  LCSSL-PALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNI 779

Query: 547  VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
            VSWN+MI GY++HG +K+AL +++EM ++ +  + +TF+ +++AC+H GLV+EG + F  
Sbjct: 780  VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTS 839

Query: 607  MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------- 659
            M  +++I    EHY+CMVDL  RAG LE A + + +MP     + W  +L AC       
Sbjct: 840  MQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMD 899

Query: 660  -------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                   RL  L P +   YV++SN+YAA G W+E   +R++M  + VKK+ G SWIE+ 
Sbjct: 900  MGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEIN 959

Query: 713  NKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD---EHKEAILSQ 769
            ++   F AG  +HP++ +IY+ L  L+ + K  GY PDTS++LQ++ D   E +E  L Q
Sbjct: 960  SEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQ 1019

Query: 770  HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
            HSERLA++ GL++ P  + +++ KNLR+CGDCHT  K ISK+  R I+ RDTNRFHHF+ 
Sbjct: 1020 HSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFEN 1079

Query: 830  GLCSCGDYW 838
            G CSCGDYW
Sbjct: 1080 GKCSCGDYW 1088



 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 180/653 (27%), Positives = 343/653 (52%), Gaps = 41/653 (6%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   LF+  P+RN   +N ++  Y R   + E L L+  +R  G      T  SV+K
Sbjct: 127 YARK---LFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIK 183

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  + D    RQ+    VK+G   ++ V  +LVD Y R   ++D     D++  ++VV+
Sbjct: 184 ACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVT 243

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W ++++GY +    +    +F RM   G+ P++FTF++ L V           QVH+ +I
Sbjct: 244 WNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
             G +  T V NALI MY K         VFD M +R+ +TWNS+++         +A  
Sbjct: 304 ACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALV 363

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M  +G +  R    S++   A   ++   R+LH  +++N ++ D  + + L+  YS
Sbjct: 364 LFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYS 423

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTY 385
           KCG +E+A ++F  + E ++ VS+ A+++G++Q G  + A+  +  M  E G++P+ FT+
Sbjct: 424 KCGMVEEAHQVFRSLLE-RNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTF 482

Query: 386 SIILT----AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +LT     +      Q+HAH+I+ N  K+  V T L++ Y + G L+ A ++F  + E
Sbjct: 483 TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 542

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           ++  +W++M+ GY Q G+T+ A+++++Q+   G+KP+ F+ SS++++C + S + ++G++
Sbjct: 543 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDS-QKGRE 601

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV-------------- 547
            H   ++  +     +   LV MY+K G+++ A +V+ +  K+D++              
Sbjct: 602 LHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGR 661

Query: 548 -----------------SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
                             WNS++ GYA  G  K++   F EM   D+E+D +T + ++  
Sbjct: 662 ANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL 721

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           C+    ++ G Q   +++ +  +  ++   + +VD+YS+ G + KA  + + M
Sbjct: 722 CSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNM 774



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 165/558 (29%), Positives = 298/558 (53%), Gaps = 19/558 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDMNESNVVSWTSLLSG 153
           G+ +H + + +G+  D  + T ++ LY R+  ++D    R++F++M E N+ +W +++  
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YAR      VL L+ RM+  G   + FTF +V+        +    Q+ + V+K G    
Sbjct: 150 YARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCN 209

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL+  Y +   + DA    D +E    +TWN+++AGYV      EA+  F+ M  
Sbjct: 210 LFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLK 269

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G      TF S +++C   +     +Q+HS+++  G   D  +   L+  Y+KC   E 
Sbjct: 270 IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEES 329

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
             K+F  M E ++ V+W ++IS   Q G  + A+  F +M   G + N F    IL A  
Sbjct: 330 CLKVFDEMGE-RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASA 388

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++      ++H H+++        +G+AL++ Y K G+++EA +VF  + E++ V+++A
Sbjct: 389 GLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNA 448

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +LAGY Q G  E A+++Y  + SE G++P++FTF++++  C A      QG+Q HA  I+
Sbjct: 449 LLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLC-ANQRNDNQGRQIHAHLIR 507

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           A +   + V + LV MYS+ G +  A E+F R  +R+  SWNSMI GY Q+G T++AL +
Sbjct: 508 ANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRL 567

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS----CMV 624
           FK+M+   ++ D  +   ++++C       +G++  + +V       TME        +V
Sbjct: 568 FKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN-----TMEEEGILQVVLV 622

Query: 625 DLYSRAGMLEKAMDIINR 642
           D+Y++ G ++ A  + ++
Sbjct: 623 DMYAKCGSMDYAWKVYDQ 640



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 288/563 (51%), Gaps = 49/563 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD   +RN V +N ++    +     +AL LFL ++  G       L S+L     L D
Sbjct: 333 VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLAD 392

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR++H   V++    D+ + ++LVD+Y +   VE+  +VF  + E N VS+ +LL+G
Sbjct: 393 IGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAG 452

Query: 154 YARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           Y +    +  LEL+H MQ E GI+P+ FTF+T+L + A++       Q+H  +I+     
Sbjct: 453 YVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITK 512

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V   L+ MY +   +  A+ +F+ M +R++ +WNSM+ GY  N    EA   F  M 
Sbjct: 513 NIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 572

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           L G +    +  S++  C +  + +  R+LH+ +++N ++ +  ++  L+  Y+KCG M+
Sbjct: 573 LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMD 632

Query: 333 -------------------------------DASKIFSMMREMKDVVSWTAMISGHLQNG 361
                                          DA  +F  M E ++   W ++++G+   G
Sbjct: 633 YAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQM-EQRNTALWNSILAGYANKG 691

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQPAVSPF-QVHAHIIKTNYEK-SFSVG 416
               + N F +M    +  +  T   I+   ++ PA+    Q+H+ IIK  +   S  + 
Sbjct: 692 LKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLE 751

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           TAL++ Y K G + +A  VF+ ++ K+IV+W+AM++GY++ G ++ A+ +Y ++  +G+ 
Sbjct: 752 TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY 811

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNI 531
           PNE TF ++++AC+  +  VE+G +         +I+AK  +  C    +V +  + G +
Sbjct: 812 PNEVTFLAILSACSH-TGLVEEGLRIFTSMQEDYNIEAKAEHYTC----MVDLLGRAGRL 866

Query: 532 ESASE-VFKRQRKRDLVSWNSMI 553
           E A E V K   + ++ +W +++
Sbjct: 867 EDAKEFVEKMPIEPEVSTWGALL 889



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 258/487 (52%), Gaps = 12/487 (2%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---AR 234
           N   +S+++    D         +HT +I NG      +   ++ +Y +S  + D   AR
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            +F+ M +R+   WN+M+  Y   + +ME    +  M  +G    + TF SVIK C   +
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           ++   RQL S V+K G++ +  +   L+  Y++ G M+DA      + E   VV+W A+I
Sbjct: 190 DMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI-EGTSVVTWNAVI 248

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE 410
           +G+++  + + A   F +M + GV P+ FT++  L    A+       QVH+ +I   ++
Sbjct: 249 AGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFK 308

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
               VG AL++ Y K    +   KVF+ + E++ V W+++++  AQ G    A+ ++ ++
Sbjct: 309 GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRM 368

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
              G K N F   S++ A +A  A + +G++ H   ++  LN+ + + SALV MYSK G 
Sbjct: 369 QESGYKSNRFNLGSILMA-SAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGM 427

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD-LEFDGITFIGVIT 589
           +E A +VF+   +R+ VS+N+++ GY Q G  ++ALE++ +M+ +D ++ D  TF  ++T
Sbjct: 428 VEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLT 487

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
            C +    ++G+Q    ++   +I   +   + +V +YS  G L  A +I NRM    +A
Sbjct: 488 LCANQRNDNQGRQIHAHLIRA-NITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNA 545

Query: 650 TVWRTVL 656
             W +++
Sbjct: 546 YSWNSMI 552


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 302/800 (37%), Positives = 463/800 (57%), Gaps = 64/800 (8%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R++H + +K GF  ++ +S +L+++Y+R  ++   +++FD+M+  N+V+W  L+SGY +N
Sbjct: 119 RELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQN 178

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT--AVQVHTMVIKN--GGEVV 213
              D     F  M   G  PN + F + L    + G       VQ+H ++ K   G +VV
Sbjct: 179 GKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVV 238

Query: 214 TSVCNALISMYLKS-KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             VCN LISMY        DAR+VFDG+  R+SI+WNS+++ Y      + A++ F++M 
Sbjct: 239 --VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQ 296

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI-DFDHNIRTGLMVAYSKCGKM 331
             G   +     +  +     +  R  R++H+ V++ G+ D    I  GL+  Y+K G +
Sbjct: 297 KEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAI 356

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQN------------------------------- 360
            DA  +F +M E KD VSW ++ISG  QN                               
Sbjct: 357 ADACSVFELMVE-KDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDS 415

Query: 361 -GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSV 415
             ++  AV +F QM R G   +  T+  IL+A  ++S      Q+HA ++K       ++
Sbjct: 416 EASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAI 475

Query: 416 GTALLNAYVKKGILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           G ALL+ Y K G ++E  K+F  + E +D V+W++M++GY        A+ +   +  +G
Sbjct: 476 GNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKG 535

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
            + + FTF+++++AC A  A +E+G + HAC I+A L + + V SALV MYSK G I+ A
Sbjct: 536 QRLDSFTFATILSAC-ASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYA 594

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
           S  F+    R++ SWNSMI GYA+HGH +KAL++F  M       D +TF+GV++AC+H 
Sbjct: 595 SRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHV 654

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           G V+EG ++F  M   + + P +EH+SCMVDL  RAG L++  D IN MP   +  +WRT
Sbjct: 655 GFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 714

Query: 655 VLAAC----------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
           VL AC                 L+ L+P ++  YVLL+NMYA+   W++ A+ R  M + 
Sbjct: 715 VLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEA 774

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
            VKKEAG SW+ +K+  + F+AGD  HP+ + IY KL EL+ +++DAGY P T Y L D+
Sbjct: 775 AVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDL 834

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           + E+KE +LS HSE++A+AF L    A  P++I+KNLRVCGDCH+    ISK+  R IV+
Sbjct: 835 ELENKEELLSYHSEKIAVAFVLTRQSA-LPIRIMKNLRVCGDCHSAFGYISKIVGRQIVL 893

Query: 819 RDTNRFHHFKEGLCSCGDYW 838
           RD+NRFHHF++G CSCGDYW
Sbjct: 894 RDSNRFHHFEDGKCSCGDYW 913



 Score =  242 bits (617), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 173/600 (28%), Positives = 298/600 (49%), Gaps = 64/600 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           Q LFD    RN V +  L+  Y ++    EA   F  + R G         S L+ C   
Sbjct: 154 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 213

Query: 89  ---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT-NNVEDGRRVFDDMNESNV 144
              GC      G Q+H    K+ +  DV V   L+ +Y    ++  D R VFD +   N 
Sbjct: 214 GPSGC----KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNS 269

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGI----KPN-SFTFSTVLGVLADEGIVATAV 199
           +SW S++S Y+R        +LF  MQ EG+    KPN +F+  +VL    +EG      
Sbjct: 270 ISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVL----EEG-RRKGR 324

Query: 200 QVHTMVIKNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +VH  VI+ G  +   ++ N L++MY KS  + DA +VF+ M ++DS++WNS+++G   N
Sbjct: 325 EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN 384

Query: 259 ELHMEAFETFN--------------------------------NMGLAGAELTRSTFVSV 286
           E   +A E F+                                 M   G  L+R TF+++
Sbjct: 385 ECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINI 444

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           +   ++     ++ Q+H+ VLK  +  D  I   L+  Y KCG+M +  KIF+ M E +D
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 504

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHA 402
            VSW +MISG++ N  +  A++    M ++G R + FT++ IL+A  +V+      +VHA
Sbjct: 505 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHA 564

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
             I+   E    VG+AL++ Y K G +D A++ FEL+  +++ +W++M++GYA+ G  E 
Sbjct: 565 CGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEK 624

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+K++ ++  +G  P+  TF  V++AC+      E  + F + S   +L+  +   S +V
Sbjct: 625 ALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMV 684

Query: 523 TMYSKKGNIESASEVFKRQ-RKRDLVSWNSMI--CGYAQHGHT---KKALEVFKEMRRQD 576
            +  + G ++   +       K +++ W +++  C  A   +T   ++A E+  E+  Q+
Sbjct: 685 DLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQN 744


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 295/826 (35%), Positives = 459/826 (55%), Gaps = 21/826 (2%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            Q LF+  P  N V +  L+  Y       E LN++  +R+ G+    +T ++V  +CG L
Sbjct: 901  QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 960

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             D V G QV    ++ GF   V+V+ SL+ ++   ++VE+   VFD MNE +++SW +++
Sbjct: 961  EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 1020

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            S YA + +    L  FH M+    + NS T S++L V +    +     +H +V+K G +
Sbjct: 1021 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 1080

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                +CN L+++Y ++    DA  VF  M +RD I+WNSM+A YV +   ++  +    +
Sbjct: 1081 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 1140

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
               G  +   TF S +  C+  + L  ++ +H+ ++  G      +   L+  Y K G M
Sbjct: 1141 LQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 1200

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             +A K+   M +  D V+W A+I GH +N   + AV  +  +  +G+  N  T   +L A
Sbjct: 1201 MEAKKVLQTMPQ-PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGA 1259

Query: 392  QPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
              A          +HAHI+ T +E    V  +L+  Y K G L+ +  +F+ +  K  + 
Sbjct: 1260 CSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 1319

Query: 447  WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            W+AM+A  A  G  E A+KI+ ++ + GV  ++F+FS  + A TA  A +E+G+Q H   
Sbjct: 1320 WNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGL-AATANLAVLEEGQQLHGLV 1378

Query: 507  IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            IK    + L V++A + MY K G +    ++  +   R  +SWN +I  +A+HG  +KA 
Sbjct: 1379 IKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKAR 1438

Query: 567  EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            E F EM +   + D +TF+ +++AC H GLVDEG  Y+D M  E  ++P +EH  C++DL
Sbjct: 1439 ETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDL 1498

Query: 627  YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
              R+G L  A   I  MP   +   WR++LAACR              L+ L P D + Y
Sbjct: 1499 LGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAY 1558

Query: 673  VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
            VL SN+ A +G W++   +RK M    +KK+   SW+++K+K +SF  G+  HPQ+++I 
Sbjct: 1559 VLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRIS 1618

Query: 733  SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
            +KL EL    K+AGY PDTS+ L D+D+E KE  L  HSERLA+AFGL+ TP  + L+I 
Sbjct: 1619 AKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIF 1678

Query: 793  KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVCGDCH+V K +S +  R IV+RD  RFHHF  G CSCGDYW
Sbjct: 1679 KNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/579 (32%), Positives = 321/579 (55%), Gaps = 28/579 (4%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +HT +I NG      +   LI  Y+K   V  AR VFDGM +R  ++W +MV+GY  N  
Sbjct: 52  IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 111

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             +AF  F++M   G +  + T+ S ++ C + + L +  Q+   + K     +  +++ 
Sbjct: 112 FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSA 171

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  +SKCGKMEDAS +F  M E +DVVSW AMI G+   G  D +   F  M R G+ P
Sbjct: 172 LVDFHSKCGKMEDASYLFGTMME-RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVP 230

Query: 381 NGFTYSIILTAQPA----VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + +T   +L A       +   Q+H  I +  Y     V   L+NAY K G L  A  + 
Sbjct: 231 DCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLR 290

Query: 437 ELIDEKDIVAWSAMLAGYAQIG-DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           + + +KD+ + +A++ GYA  G  +  A+ +++++    +  ++    S++N C A  A+
Sbjct: 291 KGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNIC-ANLAS 349

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
              G Q HA ++K + +  + + +AL+ MY+K G IE A   F    +++++SW S+I G
Sbjct: 350 FALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISG 409

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           YA+HG+   A+ ++K+M  +  + + +TF+ ++ AC+H GL  EG + F+ MVN+++I P
Sbjct: 410 YAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKP 469

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRL 661
             EHYSCMVDL++R G+LE+A +++ ++    +A++W  +L              AA  L
Sbjct: 470 RAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNL 529

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
            ++QP +S  YV+L+++Y+A G W +  ++RKLM +R  KK AGYS+ +   K+   L  
Sbjct: 530 FNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKKSIPLL-- 587

Query: 722 DISHPQSNQIYSKLE----ELSTRLKDAGYKPDTSYVLQ 756
            + H  S + ++ L+     LS R       PDT +VL+
Sbjct: 588 QVQHGVSRRDFNILDFGAIFLSNRTPQEECFPDT-FVLE 625



 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 197/638 (30%), Positives = 340/638 (53%), Gaps = 24/638 (3%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GC 90
            +FD    RN   ++ +L  Y R  L++EA+ LF  +  LG+   G  ++S++  C   G 
Sbjct: 801  VFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGY 860

Query: 91   LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            + D  F  QVH   VK+G   DV V T+LV  Y     V + +++F++M + NVVSWTSL
Sbjct: 861  MADEGF--QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSL 918

Query: 151  LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV---LGVLADEGIVATAVQVHTMVIK 207
            + GY+ +     VL ++ RM+ EG+  N  TF+TV    G+L D+       QV   +I+
Sbjct: 919  MVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ---VLGYQVLGHIIQ 975

Query: 208  NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
             G E   SV N+LISM+     V +A  VFD M + D I+WN+M++ Y  + L  E+   
Sbjct: 976  YGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRC 1035

Query: 268  FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            F+ M     E   +T  S++ +C++   L+  R +H  V+K G+D +  I   L+  YS+
Sbjct: 1036 FHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSE 1095

Query: 328  CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
             G+ EDA  +F  M E +D++SW +M++ ++Q+G     +    ++ + G   N  T++ 
Sbjct: 1096 AGRSEDAELVFQAMTE-RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFAS 1154

Query: 388  ILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
             L A    +  +    VHA II   +     VG AL+  Y K G++ EA KV + + + D
Sbjct: 1155 ALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPD 1214

Query: 444  IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
             V W+A++ G+A+  +   AVK Y+ +  +G+  N  T  SV+ AC+AP   ++ G   H
Sbjct: 1215 RVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIH 1274

Query: 504  ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
            A  +     +   V ++L+TMY+K G++ S++ +F     +  ++WN+M+   A HG  +
Sbjct: 1275 AHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGE 1334

Query: 564  KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHY 620
            +AL++F EMR   +  D  +F G + A  +  +++EGQQ   +++    E  ++ T    
Sbjct: 1335 EALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVT---- 1390

Query: 621  SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            +  +D+Y + G +   + ++ + P   S   W  +++A
Sbjct: 1391 NAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISA 1427



 Score =  238 bits (608), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 286/584 (48%), Gaps = 42/584 (7%)

Query: 97   GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            G+ +H  C+       +  + +L+++Y +  N+E  R VFD+M   N  SW+++LSGY R
Sbjct: 763  GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822

Query: 157  NKMNDRVLELFHRMQVEGIKPNSFTFSTVL------GVLADEGIVATAVQVHTMVIKNGG 210
              + +  + LF +M   G++PN F  ++++      G +ADEG      QVH  V+K G 
Sbjct: 823  VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGF-----QVHGFVVKTGI 877

Query: 211  EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                 V  AL+  Y    +V +A+ +F+ M D + ++W S++ GY  +    E    +  
Sbjct: 878  LGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQR 937

Query: 271  MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
            M   G    ++TF +V   C   ++  L  Q+   +++ G +   ++   L+  +S    
Sbjct: 938  MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 997

Query: 331  MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            +E+A  +F  M E  D++SW AMIS +  +G    ++  F  M       N  T S +L+
Sbjct: 998  VEEACYVFDHMNEC-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 1056

Query: 391  AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
               +V   +    +H  ++K   + +  +   LL  Y + G  ++A  VF+ + E+D+++
Sbjct: 1057 VCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 1116

Query: 447  WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            W++M+A Y Q G     +KI  +L   G   N  TF+S + AC+ P   +E  K  HA  
Sbjct: 1117 WNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES-KIVHALI 1175

Query: 507  IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            I A  ++ L V +ALVTMY K G +  A +V +   + D V+WN++I G+A++    +A+
Sbjct: 1176 IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAV 1235

Query: 567  EVFKEMRRQDLEFDGITFIGVITACT------------HAGLVDEGQQYFDIMVNEHHIY 614
            + +K +R + +  + IT + V+ AC+            HA +V  G +  D + N     
Sbjct: 1236 KAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNS---- 1291

Query: 615  PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                    ++ +Y++ G L  +  I + +    S   W  ++AA
Sbjct: 1292 --------LITMYAKCGDLNSSNYIFDGLG-NKSPITWNAMVAA 1326



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 269/520 (51%), Gaps = 14/520 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  +H   + +GF  D++++T L+  Y++  +V   R VFD M E +VVSWT+++SGY++
Sbjct: 49  GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 108

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS- 215
           N   ++   LF  M+  G+K N FT+ + L        +   +QV   + K  G  V + 
Sbjct: 109 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQK--GRFVENL 166

Query: 216 -VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V +AL+  + K   + DA  +F  M +RD ++WN+M+ GY       ++F  F +M   
Sbjct: 167 FVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRG 226

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMED 333
           G      T  SV++  A    L +A Q+H  + + G    ++I TGL++ AY+K G +  
Sbjct: 227 GLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYG-SYDIVTGLLINAYAKNGSLRS 285

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNFFCQMTREGVRPNGFTYSIILTAQ 392
           A  +   M + KD+ S TA+I+G+   G   + A++ F +M +  +  +      +L   
Sbjct: 286 AKDLRKGMLK-KDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNIC 344

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             ++ F    Q+HA  +K       ++G AL++ Y K G +++A + F+ ++EK++++W+
Sbjct: 345 ANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWT 404

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           ++++GYA+ G    AV +Y+++ S+G KPN+ TF S++ AC+      E  + F+    K
Sbjct: 405 SLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNK 464

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVF-KRQRKRDLVSWNSMICGYAQHGHTKKALE 567
             +       S +V +++++G +E A  +  K   K +   W +++   + +G+     E
Sbjct: 465 YNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKE 524

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
               +     E + + ++ + +  + AGL D+  +   +M
Sbjct: 525 AASNLFNMQPE-NSVNYVVLASIYSAAGLWDDAWKIRKLM 563



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 219/440 (49%), Gaps = 15/440 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD  P+R+ V +  ++  Y ++   ++A  LF  +R  G+     T  S L+ C  L
Sbjct: 85  RNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSL 144

Query: 92  FDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G QV   C++ G F  ++ V ++LVD + +   +ED   +F  M E +VVSW ++
Sbjct: 145 RCLDMGIQVQ-GCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAM 203

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GYA     D    +F  M   G+ P+ +T  +VL   A+ G +  A Q+H ++ + G 
Sbjct: 204 IGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGY 263

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH-MEAFETFN 269
                V   LI+ Y K+  +R A+ +  GM  +D  +  +++ GY    ++ ++A + F 
Sbjct: 264 GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFK 323

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M      +      S++ +CA      L  Q+H+  LK    +D  +   L+  Y+K G
Sbjct: 324 EMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSG 383

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++EDA + F  M E K+V+SWT++ISG+ ++G   +AV+ + +M  +G +PN  T+  +L
Sbjct: 384 EIEDAKRAFDEMEE-KNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLL 442

Query: 390 -----TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-D 443
                T   A      +  + K N +      + +++ + ++G+L+EA  +   ID K +
Sbjct: 443 FACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHN 502

Query: 444 IVAWSAMLA-----GYAQIG 458
              W A+L      GY  +G
Sbjct: 503 ASLWGAILGASSIYGYMSLG 522



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 192/371 (51%), Gaps = 8/371 (2%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L  S ++ +++LC   K  +    +H+ ++ NG   D ++ T L++ Y K G +  A  +
Sbjct: 28  LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 87

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS- 396
           F  M E + VVSWTAM+SG+ QNG  + A   F  M   GV+ N FTY   L A  ++  
Sbjct: 88  FDGMPE-RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRC 146

Query: 397 ---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                QV   I K  + ++  V +AL++ + K G +++A+ +F  + E+D+V+W+AM+ G
Sbjct: 147 LDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGG 206

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           YA  G  + +  ++R +   G+ P+ +T  SV+ A +A    +    Q H    +    +
Sbjct: 207 YAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA-SAEGGGLIIANQIHGIITQLGYGS 265

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG-HTKKALEVFKEM 572
              V+  L+  Y+K G++ SA ++ K   K+DL S  ++I GYA  G ++  AL++FKEM
Sbjct: 266 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEM 325

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
            + ++  D +    ++  C +      G Q     +     Y  +   + ++D+Y+++G 
Sbjct: 326 NQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSY-DVAMGNALIDMYAKSGE 384

Query: 633 LEKAMDIINRM 643
           +E A    + M
Sbjct: 385 IEDAKRAFDEM 395



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 2/176 (1%)

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           + L+S   + +   +  ++  C    A  +QG   H   I     + L +++ L+  Y K
Sbjct: 19  KLLSSNPTRLDPSLYLKILQLCIDKKAK-KQGHLIHTHLITNGFGSDLHLNTKLIIFYVK 77

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G++ +A  VF    +R +VSW +M+ GY+Q+G  +KA  +F +MR   ++ +  T+   
Sbjct: 78  VGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSA 137

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           + ACT    +D G Q     + +      +   S +VD +S+ G +E A  +   M
Sbjct: 138 LRACTSLRCLDMGIQ-VQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM 192


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 283/829 (34%), Positives = 470/829 (56%), Gaps = 27/829 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+  +R+   +N ++  Y  +     AL ++  +R LG+     T   +LK CG +
Sbjct: 12  EMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIV 71

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN-VVSWTSL 150
            D   G ++H   +K G    V V  SLV LY + N++   R++FD M   N VVSW S+
Sbjct: 72  EDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSI 131

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +S Y+ N M    L LF  M   G+  N++TF+  L    D   +   +Q+H  ++K+G 
Sbjct: 132 ISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGR 191

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +   V NAL++MY++   + +A  +F  +E +D +TWNSM+ G++ N L+ EA E F +
Sbjct: 192 VLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYD 251

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKC 328
           +  A  +  + + +S+I        L   +++H+  +KNG  FD NI  G  L+  Y+KC
Sbjct: 252 LQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNG--FDSNILVGNTLIDMYAKC 309

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
             M    + F +M   KD++SWT   +G+ QN     A+    Q+  EG+  +      I
Sbjct: 310 CCMSYGGRAFDLMAH-KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSI 368

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A   ++      ++H + I+          T +++ Y + GI+D A ++FE I+ KD+
Sbjct: 369 LLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNT-IIDVYGECGIIDYAVRIFESIECKDV 427

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+W++M++ Y   G    A++++  +   G++P+  T  S+++A  + S  +++GK+ H 
Sbjct: 428 VSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLST-LKKGKEIHG 486

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             I+        +S+ LV MY++ G++E A ++F   + R+L+ W +MI  Y  HG+ + 
Sbjct: 487 FIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEA 546

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           A+E+F  M+ + +  D ITF+ ++ AC+H+GLV+EG+ + +IM  E+ + P  EHY+C+V
Sbjct: 547 AVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLV 606

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           DL  R   LE+A  I+  M    +  VW  +L ACR              L+ L   +  
Sbjct: 607 DLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPG 666

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YVL+SN++AA G W++   VR  M    + K  G SWIEV NK ++FL+ D  HP+ ++
Sbjct: 667 NYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDK 726

Query: 731 IYSKLEELSTRLK-DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
           IY KL +++ +LK + GY   T +VL ++ +E K  +L  HSERLAIA+GL+AT  G P+
Sbjct: 727 IYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPI 786

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++ KNLRVCGDCH+   L+S+   R+++VRD +RFHHFK+G+CSCGD+W
Sbjct: 787 RVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 280/526 (53%), Gaps = 15/526 (2%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +  +V D   +FD M+E ++ +W +++ GY  N      LE++  M+  G+  +S+T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 182 FSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           F  +L   G++ D   +    ++H + IK G +    V N+L+++Y K   +  AR +FD
Sbjct: 61  FPVLLKACGIVED---LFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFD 117

Query: 239 GMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
            M  R D ++WNS+++ Y  N +  EA   F+ M  AG      TF + ++ C  +  ++
Sbjct: 118 RMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIK 177

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L  Q+H+ +LK+G   D  +   L+  Y + GKM +A+ IF  + E KD+V+W +M++G 
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNL-EGKDIVTWNSMLTGF 236

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSF 413
           +QNG    A+ FF  +    ++P+  +   I+ A   +       ++HA+ IK  ++ + 
Sbjct: 237 IQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNI 296

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            VG  L++ Y K   +    + F+L+  KD+++W+   AGYAQ      A+++ RQL  E
Sbjct: 297 LVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQME 356

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G+  +     S++ AC   +  + + K+ H  +I+  L++ + + + ++ +Y + G I+ 
Sbjct: 357 GMDVDATMIGSILLACRGLN-CLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDY 414

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A  +F+    +D+VSW SMI  Y  +G   KALEVF  M+   LE D +T + +++A   
Sbjct: 415 AVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCS 474

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
              + +G++    ++ +  I       + +VD+Y+R G +E A  I
Sbjct: 475 LSTLKKGKEIHGFIIRKGFILEG-SISNTLVDMYARCGSVEDAYKI 519


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 303/838 (36%), Positives = 462/838 (55%), Gaps = 74/838 (8%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            LFD   +R+ V +N +L  Y +  L +EA  LF    R GL                   
Sbjct: 784  LFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL------------------- 824

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-----------NES 142
                             R    S  L+   +   N ++G+ + D +           +  
Sbjct: 825  -----------------RPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNP 867

Query: 143  NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
            +V  W   LS       N   +E F  M    I  ++ T   VL  +A    +    QVH
Sbjct: 868  DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVH 927

Query: 203  TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             + +K+G +   SV N+L++MY K      AR VF+ M+  D I+WNSM++    + L  
Sbjct: 928  GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 987

Query: 263  EAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGL 321
            E+   F ++   G +    T  SV++ C++  + L ++RQ+H   LK G   D  + T L
Sbjct: 988  ESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTL 1047

Query: 322  MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
            +  YSK GKME+A  +F    ++ D+  W AM+ G++       A+  F  + + G + +
Sbjct: 1048 IDVYSKSGKMEEAEFLFQNKDDL-DLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSD 1106

Query: 382  GFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
              T   + TA  A           Q+HAH IK  ++    V + +L+ Y+K G +  A  
Sbjct: 1107 QIT---LATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGI 1163

Query: 435  VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
            VF  I   D VAW++M++G    G+ + A++IY ++    V P+E+TF+++I A +  +A
Sbjct: 1164 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA 1223

Query: 495  AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
             +EQG+Q HA  IK    +   V ++LV MY+K GNIE A  +FK+   R++  WN+M+ 
Sbjct: 1224 -LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLV 1282

Query: 555  GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            G AQHG+ ++A+ +FK M+   +E D ++FIG+++AC+HAGL  E  +Y   M N++ I 
Sbjct: 1283 GLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIE 1342

Query: 615  PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
            P +EHYSC+VD   RAG++++A  +I  MPF ASA++ R +L ACR              
Sbjct: 1343 PEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAAR 1402

Query: 661  LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
            L +L+P DSA YVLLSN+YAA   W +    RK+M  + VKK+ G+SWI+VKN  + F+ 
Sbjct: 1403 LFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVV 1462

Query: 721  GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
             D SHPQ++ IY K+EE+   +++ GY PDT +VL D++DE KE  L  HSE+LAIA+GL
Sbjct: 1463 DDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGL 1522

Query: 781  VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ++TPA   ++++KNLRVCGDCH  IK ISK+  R+IV+RD NRFHHF++G+CSCGDYW
Sbjct: 1523 ISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 193/662 (29%), Positives = 319/662 (48%), Gaps = 70/662 (10%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYC-----RDSLHQEALNLFLGIRRLGLPLFGST----LS 82
            + +FD +P+R+ V +N +L  Y       D   QE L+LF    RL     GST    L+
Sbjct: 676  RQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLF----RLLRASLGSTTRMTLA 731

Query: 83   SVLKTC---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
             VLK C   GCL+       VH   +K G   DV VS +LV++Y +   + D R +FD M
Sbjct: 732  PVLKLCLNSGCLW---AAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM 788

Query: 140  NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA----DEG-I 194
             E +VV W  +L GY +  +     +LF      G++P+ F+   +L  ++    DEG  
Sbjct: 789  RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848

Query: 195  VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
            +A  VQ +                       K  +  D   VF          WN  ++ 
Sbjct: 849  LADQVQAYAA---------------------KLSLSDDNPDVF---------CWNKKLSE 878

Query: 255  YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
             +    +  A E F NM     +    T + V+   A T +L L +Q+H   +K+G+D D
Sbjct: 879  CLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSD 938

Query: 315  HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             ++   L+  YSK G    A ++F+ M+ + D++SW +MIS   Q+   + +VN F  + 
Sbjct: 939  VSVANSLVNMYSKMGCAYFAREVFNDMKHL-DLISWNSMISSCAQSSLEEESVNLFIDLL 997

Query: 375  REGVRPNGFTYSIILTAQPAV-----SPFQVHAHIIKT-NYEKSFSVGTALLNAYVKKGI 428
             EG++P+ FT + +L A  ++        Q+H H +KT N   SF V T L++ Y K G 
Sbjct: 998  HEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSF-VATTLIDVYSKSGK 1056

Query: 429  LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
            ++EA  +F+  D+ D+  W+AM+ GY    D + A++++  +   G K ++ T ++   A
Sbjct: 1057 MEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKA 1116

Query: 489  CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
            C      ++QGKQ HA +IKA  ++ L V+S ++ MY K G++ +A  VF      D V+
Sbjct: 1117 CGC-LVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA 1175

Query: 549  WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
            W SMI G   +G+  +AL ++  MR+  +  D  TF  +I A +    +++G+Q    ++
Sbjct: 1176 WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI 1235

Query: 609  NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHD 668
                +       S +VD+Y++ G +E A  +  +M       V    L    L+ L  H 
Sbjct: 1236 KLDCVSDPFVGTS-LVDMYAKCGNIEDAYRLFKKM------NVRNIALWNAMLVGLAQHG 1288

Query: 669  SA 670
            +A
Sbjct: 1289 NA 1290



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 164/589 (27%), Positives = 275/589 (46%), Gaps = 45/589 (7%)

Query: 84   VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
            +L+T     + + G+  H   V SG A D  +S +L+ +Y +  ++   R+VFD   E +
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 144  VVSWTSLLSGYARN-KMND----RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
            +V+W ++L  YA +   ND      L LF  ++         T + VL +  + G +  A
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 199  VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
              VH   IK G E    V  AL+++Y K   +RDAR +FD M +RD + WN M+ GYV  
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 259  ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
             L  EAF+ F       +E  RS              LR   +   Q++ NG+  + N  
Sbjct: 807  GLEKEAFQLF-------SEFHRSG-------------LR-PDEFSVQLILNGVS-EVNWD 844

Query: 319  TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             G  +A     +++  +   S+  +  DV  W   +S  L  G    A+  F  M    +
Sbjct: 845  EGKWLA----DQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNI 900

Query: 379  RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
              +  T  ++L A           QVH   +K+  +   SV  +L+N Y K G    A +
Sbjct: 901  DYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFARE 960

Query: 435  VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
            VF  +   D+++W++M++  AQ    E +V ++  L  EG+KP+ FT +SV+ AC++   
Sbjct: 961  VFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLID 1020

Query: 495  AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
             +   +Q H  ++K        V++ L+ +YSK G +E A  +F+ +   DL  WN+M+ 
Sbjct: 1021 GLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMF 1080

Query: 555  GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            GY      KKALE+F  + +   + D IT      AC    L+D+G+Q     ++ H I 
Sbjct: 1081 GYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQ-----IHAHAIK 1135

Query: 615  PTMEH----YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
               +      S ++D+Y + G +  A  + N +  A     W ++++ C
Sbjct: 1136 AGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYIS-APDDVAWTSMISGC 1183



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 221/446 (49%), Gaps = 8/446 (1%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            + +F+     + + +N ++    + SL +E++NLF+ +   GL     TL+SVL+ C  L
Sbjct: 959  REVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSL 1018

Query: 92   FDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
             D +   RQ+H   +K+G   D  V+T+L+D+Y ++  +E+   +F + ++ ++  W ++
Sbjct: 1019 IDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAM 1078

Query: 151  LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            + GY       + LELF  +   G K +  T +T         ++    Q+H   IK G 
Sbjct: 1079 MFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGF 1138

Query: 211  EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +    V + ++ MY+K   + +A  VF+ +   D + W SM++G V N    +A   ++ 
Sbjct: 1139 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 1198

Query: 271  MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
            M  +       TF ++IK  +    L   RQLH+ V+K     D  + T L+  Y+KCG 
Sbjct: 1199 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 1258

Query: 331  MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            +EDA ++F  M  ++++  W AM+ G  Q+G  + AVN F  M   G+ P+  ++  IL+
Sbjct: 1259 IEDAYRLFKKM-NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 1317

Query: 391  A---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A       S    + H +  +Y  E      + L++A  + G++ EA KV E +  K   
Sbjct: 1318 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 1377

Query: 446  AWSAMLAGYAQI-GDTEGAVKIYRQL 470
            + +  L G  +I GD E   ++  +L
Sbjct: 1378 SINRALLGACRIQGDVETGKRVAARL 1403



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/490 (21%), Positives = 212/490 (43%), Gaps = 62/490 (12%)

Query: 286  VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
            +++   +T  L L +  H++++ +G   DH +   L+  YSKCG +  A ++F    E +
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPE-R 685

Query: 346  DVVSWTAMISGHL-----QNGAIDLAVNFF-------CQMTREGVRPNGFTYSIILTAQP 393
            D+V+W A++  +       +G     ++ F          TR  + P      + L +  
Sbjct: 686  DLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAP---VLKLCLNSGC 742

Query: 394  AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
              +   VH + IK   E    V  AL+N Y K G + +A  +F+ + E+D+V W+ ML G
Sbjct: 743  LWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKG 802

Query: 454  YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
            Y Q+G  + A +++ +    G++P+EF+   ++N  +      ++GK             
Sbjct: 803  YVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS--EVNWDEGKWL----------- 849

Query: 514  ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
                 +  V  Y+ K ++   +         D+  WN  +      G    A+E F  M 
Sbjct: 850  -----ADQVQAYAAKLSLSDDNP--------DVFCWNKKLSECLWAGDNWGAIECFVNMN 896

Query: 574  RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              ++++D +T + V+ A      ++ G+Q   I V +  +   +   + +V++YS+ G  
Sbjct: 897  GLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAV-KSGLDSDVSVANSLVNMYSKMGCA 955

Query: 634  EKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVR- 692
              A ++ N M        W +++++C   SL+     +++ L +      H+   + +R 
Sbjct: 956  YFAREVFNDMKH-LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRA 1014

Query: 693  --KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
               L++   + ++     ++  N   SF+A  +       +YSK          +G   +
Sbjct: 1015 CSSLIDGLNISRQIHVHALKTGNIADSFVATTLI-----DVYSK----------SGKMEE 1059

Query: 751  TSYVLQDIDD 760
              ++ Q+ DD
Sbjct: 1060 AEFLFQNKDD 1069


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 281/764 (36%), Positives = 447/764 (58%), Gaps = 27/764 (3%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           F + +H   V +G  + + +ST LV+LY    +V   R  FD + + +V +W S++S Y 
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193

Query: 156 RNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            N      +  F+++  V  I+P+ +TF  VL      G +    ++H    K G +   
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNV 250

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  +LI MY +      AR++FD M  RD  +WN+M++G + N    +A +  + M L 
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G ++   T VS++ +C    ++  A  +H  V+K+G++FD  +   L+  Y+K G +EDA
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SIILT 390
            K F  M  + DVVSW ++I+ + QN     A  FF +M   G +P+  T     SI+  
Sbjct: 371 RKAFQQMF-ITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQ 429

Query: 391 AQPAVSPFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           ++   +   VH  I++  +  +   +G A+++ Y K G+LD A KVFE+I  KD+++W+ 
Sbjct: 430 SRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNT 489

Query: 450 MLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           ++ GYAQ G    A+++Y+ +   + + PN+ T+ S++ A  A   A++QG + H   IK
Sbjct: 490 LITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA-YAHVGALQQGMKIHGRVIK 548

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L+  + V++ L+ +Y K G +  A  +F +  +   V+WN++I  +  HGH +K L++
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F EM  + ++ D +TF+ +++AC+H+G V+EG+  F +M  E+ I P+++HY CMVDL  
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLG 667

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG LE A D I  MP    A++W  +L ACR              L  +   +   YVL
Sbjct: 668 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 727

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA  G W+   +VR L  +R +KK  G+S IEV  K   F  G+ SHP+  +IY +
Sbjct: 728 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEE 787

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L  L+ ++K  GY PD S+VLQD++++ KE IL+ HSERLAIAFG+++TP  +P++I KN
Sbjct: 788 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCH   K IS++ +R+IVVRD+NRFHHFK+G+CSCGDYW
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 169/542 (31%), Positives = 280/542 (51%), Gaps = 23/542 (4%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG--LPLFGSTLSSVLKTCGCLF 92
           FD+ PQ++   +N ++  Y  +    EA+  F  +  +    P F  T   VLK CG L 
Sbjct: 174 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDF-YTFPPVLKACGTLV 232

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   GR++HC   K GF  +V V+ SL+ +Y R       R +FDDM   ++ SW +++S
Sbjct: 233 D---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMIS 289

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N    + L++   M++EGIK N  T  ++L V    G ++TA+ +H  VIK+G E 
Sbjct: 290 GLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF 349

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V NALI+MY K   + DAR  F  M   D ++WNS++A Y  N+  + A   F  M 
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGKM 331
           L G +    T VS+  + A +++ + +R +H  +++ G +  D  I   ++  Y+K G +
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILT 390
           + A K+F ++  +KDV+SW  +I+G+ QNG    A+  +  M   + + PN  T+  IL 
Sbjct: 470 DSAHKVFEII-PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP 528

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   V   Q    +H  +IKTN      V T L++ Y K G L +A  +F  + ++  V 
Sbjct: 529 AYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 588

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ----F 502
           W+A+++ +   G  E  +K++ ++  EGVKP+  TF S+++AC+  S  VE+GK      
Sbjct: 589 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH-SGFVEEGKWCFRLM 647

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
               IK  L +  C    +V +  + G +E A +  K    + D   W +++     HG+
Sbjct: 648 QEYGIKPSLKHYGC----MVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 703

Query: 562 TK 563
            +
Sbjct: 704 IE 705



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 255/559 (45%), Gaps = 56/559 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +SLFD  P R+   +N ++    ++    +AL++   +R  G+ +   T+ S+L  C  L
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D      +H   +K G   D+ VS +L+++Y +  N+ED R+ F  M  ++VVSW S++
Sbjct: 330 GDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSII 389

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG- 210
           + Y +N         F +MQ+ G +P+  T  ++  ++A       +  VH  +++ G  
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449

Query: 211 --EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             +VV  + NA++ MY K  ++  A  VF+ +  +D I+WN+++ GY  N L  EA E +
Sbjct: 450 MEDVV--IGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY 507

Query: 269 NNMGLAGAEL-TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
             M      +  + T+VS++   A    L+   ++H +V+K  +  D  + T L+  Y K
Sbjct: 508 KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGK 567

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG++ DA  +F  + + +  V+W A+IS H  +G  +  +  F +M  EGV+P+  T+  
Sbjct: 568 CGRLVDAMSLFYQVPQ-ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF-- 624

Query: 388 ILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA- 446
                                         +LL+A    G ++E    F L+ E  I   
Sbjct: 625 -----------------------------VSLLSACSHSGFVEEGKWCFRLMQEYGIKPS 655

Query: 447 ---WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
              +  M+    + G  E A    + +    ++P+   + +++ AC      +E GK F 
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYDFIKDMP---LQPDASIWGALLGACRI-HGNIELGK-FA 710

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL---VSWNSMICG----- 555
           +  +    +  +     L  +Y+  G  E   +V    R+R L     W+++        
Sbjct: 711 SDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDV 770

Query: 556 -YAQHGHTKKALEVFKEMR 573
            Y  +    K  E+++E+R
Sbjct: 771 FYTGNQSHPKCKEIYEELR 789


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 300/775 (38%), Positives = 450/775 (58%), Gaps = 42/775 (5%)

Query: 96  FGRQVHCECVKSG--FARDVNVSTSLVDLYMRTNNVEDGRRVFDDM--NESNVVSWTSLL 151
            GR +    +++G     D  V+ SL+ LY + + V   R VFD M     ++VSWT++ 
Sbjct: 65  LGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMA 124

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTF-STVLGVLADEGIVATAVQVHTMVIKNG- 209
           S  +RN      L LF     EG+ PN+FT  +      A E        V  +V K G 
Sbjct: 125 SCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGF 184

Query: 210 -GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
            G  V+  C ALI M+ K+  +   R VFDG+ +R  + W  ++  Y  +    EA E F
Sbjct: 185 WGTDVSVGC-ALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELF 243

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +M   G +  + T  S++  C      RL +QLHS  L+ G++ D  +  GL+  Y+K 
Sbjct: 244 LDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKS 303

Query: 329 ---GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN-FFCQMTREGVRPNGFT 384
                + +A ++F+ M +  +V++WTA++SG++Q G+ D  V   FC+M  EG+RPN  T
Sbjct: 304 HNGQSLHNAREVFNRMPK-HNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHIT 362

Query: 385 YSIILTAQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           YS +L A   +    S  Q+H H +K+N      VG AL++ Y + G ++EA   F+ + 
Sbjct: 363 YSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLY 422

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYR--QLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           EK++V++S  L       D +G    Y+  Q+    +  + FTF S+I+A  A    + +
Sbjct: 423 EKNMVSFSGNL-------DGDGRSNTYQDYQIERMELGISTFTFGSLISA-AASVGMLTK 474

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G++ HA S+KA   +   + ++LV+MYS+ G +  A +VF      +++SW SMI G A+
Sbjct: 475 GQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAK 534

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG+  +ALE+F +M    ++ + +T+I V++AC+HAGLV EG+++F +M   H + P ME
Sbjct: 535 HGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRME 594

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISL 664
           HY+CMVDL  R+G++E A+D IN MP    A VW+T+L AC+              +I L
Sbjct: 595 HYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQL 654

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
           +P D A YVLLSN+YA  G W + AR+R LM D+ + KE G SW+ V N  + F AGD S
Sbjct: 655 EPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTS 714

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA-T 783
           HPQ+ +IY+KLE L   +K  GY PDTS VL D+ DE KE  L QHSE++A+AFGL++ T
Sbjct: 715 HPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCT 774

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            A  P++I KNLRVC DCH+ +K +SK   R+I++RD+NRFH  K+G CSCG+YW
Sbjct: 775 SATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 126/383 (32%), Positives = 203/383 (53%), Gaps = 21/383 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD   +R  V +  L+  Y +     EA+ LFL +   G      TLSS+L  C  L  
Sbjct: 211 VFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGS 270

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN---VEDGRRVFDDMNESNVVSWTSL 150
              G+Q+H   ++ G   D  VS  LVD+Y +++N   + + R VF+ M + NV++WT+L
Sbjct: 271 FRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTAL 330

Query: 151 LSGYA-RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           LSGY  R   +++V+ LF +M  EGI+PN  T+S++L   A+ G   +  Q+HT  +K+ 
Sbjct: 331 LSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSN 390

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
              +  V NAL+SMY +S  + +AR  FD + +++ ++++  + G   +        T+ 
Sbjct: 391 LADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRS-------NTYQ 443

Query: 270 NMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           +  +   EL  STF   S+I   A+   L   ++LH+  LK G   D  I   L+  YS+
Sbjct: 444 DYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSR 503

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG + DA ++F  M +  +V+SWT+MISG  ++G    A+  F  M   GV+PN  TY  
Sbjct: 504 CGYLVDACQVFDEMND-HNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIA 562

Query: 388 ILTAQPAVSPFQVHAHIIKTNYE 410
           +L+A         HA ++K   E
Sbjct: 563 VLSACS-------HAGLVKEGKE 578



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 180/357 (50%), Gaps = 16/357 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYC-RDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +F+R P+ N + +  LL  Y  R S   + + LF  +   G+     T SS+LK C  
Sbjct: 313 REVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACAN 372

Query: 91  LFDHVFGRQVHCECVKSGFARDVN-VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           L D   GRQ+H  CVKS  A D+N V  +LV +Y  + ++E+ R  FD + E N+VS++ 
Sbjct: 373 LGDQDSGRQIHTHCVKSNLA-DLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSG 431

Query: 150 LLSGYAR-NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            L G  R N   D  +E   RM++ GI  ++FTF +++   A  G++    ++H + +K 
Sbjct: 432 NLDGDGRSNTYQDYQIE---RMEL-GI--STFTFGSLISAAASVGMLTKGQRLHALSLKA 485

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G     ++ N+L+SMY +   + DA  VFD M D + I+W SM++G   +     A E F
Sbjct: 486 GFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELF 545

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK--NGIDFDHNIRTGLMVAYS 326
           ++M  AG +    T+++V+  C+    ++  ++ H ++++  +G+         ++    
Sbjct: 546 HDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKE-HFRMMQKHHGLIPRMEHYACMVDLLG 604

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID---LAVNFFCQMTREGVRP 380
           + G +EDA    + M    D + W  ++     +  +D   +A N   Q+  +   P
Sbjct: 605 RSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAP 661


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 284/829 (34%), Positives = 457/829 (55%), Gaps = 23/829 (2%)

Query: 29   KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
            K+ + +FD+ P+R+ V +N ++    +     EA++ F  ++ +G+     +L ++    
Sbjct: 181  KRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI 240

Query: 89   GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
              L +    R +H    +  F+    VS  L+DLY +  +V+  RRVFD M + + VSW 
Sbjct: 241  CKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWG 298

Query: 149  SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            ++++GYA N     VLELF +M++  ++ N  +  +     A+   +    ++H   ++ 
Sbjct: 299  TMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQ 358

Query: 209  GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
              +    V   L+ MY K      A+ +F G++ RD + W++++A  V      EA   F
Sbjct: 359  RIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLF 418

Query: 269  NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
              M     +  R T +S++  CA    L+L + +H   +K  +D D +  T L+  Y+KC
Sbjct: 419  QEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKC 478

Query: 329  GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            G    A   F+ M   +D+V+W ++I+G+ Q G    A++ F ++    + P+  T   +
Sbjct: 479  GFFTAALTTFNRMSS-RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGV 537

Query: 389  LTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKD 443
            + A   ++       +H  I+K  +E    V  AL++ Y K G L  A  +F   D  KD
Sbjct: 538  VPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKD 597

Query: 444  IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
             V W+ ++A Y Q G  + A+  + Q+  E   PN  TF SV+ A  A  AA  +G  FH
Sbjct: 598  EVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPA-AAYLAAFREGMAFH 656

Query: 504  ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
            AC I+    +   V ++L+ MY+K G ++ + ++F     +D VSWN+M+ GYA HGH  
Sbjct: 657  ACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGD 716

Query: 564  KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            +A+ +F  M+   ++ D ++F+ V++AC HAGLV+EG++ F  M +++HI P +EHY+CM
Sbjct: 717  RAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACM 776

Query: 624  VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
            VDL  RAG+ ++ +  I  MP    A VW  +L +CR              L+ L+P + 
Sbjct: 777  VDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNP 836

Query: 670  AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
            A +V+LS++YA +G W +  + R  MND  +KK  G SW+E+KNK ++F  GD SHPQ  
Sbjct: 837  AHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLE 896

Query: 730  QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
             ++     L  +++  GY PD S VLQ++++E KE  L  HSERLAI F L+ TP G+ +
Sbjct: 897  SMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTI 956

Query: 790  QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            QIVKNLRVC DCHT  K ISK+  R I+VRD  RFHHF++G+CSC DYW
Sbjct: 957  QIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 192/678 (28%), Positives = 344/678 (50%), Gaps = 31/678 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FD +P  + + +N ++  Y R   + EAL ++  +   GL     T + VLK C   
Sbjct: 83  RSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGA 142

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G   H E  + G  RDV +   LVD+Y +  +++  R VFD M + +VV+W +++
Sbjct: 143 LNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMI 202

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G ++++     ++ F  MQ+ G++P+S +   +   +     +     +H  V +   +
Sbjct: 203 AGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--D 260

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             ++V N LI +Y K   V  AR VFD M D+D ++W +M+AGY  N   +E  E F+ M
Sbjct: 261 FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L    + + + VS     A T +L   +++H   L+  ID D  + T LMV Y+KCG+ 
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E A ++F  ++  +D+V+W+A+I+  +Q G  + A++ F +M  + ++PN  T   IL A
Sbjct: 381 EKAKQLFWGLQG-RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPA 439

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +S  +    +H   +K + +   S GTAL++ Y K G    A   F  +  +DIV W
Sbjct: 440 CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTW 499

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++++ GYAQIGD   A+ ++ +L    + P+  T   V+ AC A    ++QG   H   +
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC-ALLNDLDQGTCIHGLIV 558

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVF-KRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           K    +   V +AL+ MY+K G++ SA  +F K    +D V+WN +I  Y Q+GH K+A+
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             F +MR ++   + +TF+ V+ A  +     EG  +   ++    +  T+   S ++D+
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS-LIDM 677

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQ 686
           Y++ G L+ +  + N M    + + W  +L+                     YA  GH  
Sbjct: 678 YAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSG--------------------YAVHGHGD 716

Query: 687 ERARVRKLMNDRKVKKEA 704
               +  LM + +V+ ++
Sbjct: 717 RAIALFSLMQESQVQIDS 734



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 167/569 (29%), Positives = 292/569 (51%), Gaps = 20/569 (3%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H + + SGF    ++ T L++LY   +  +  R VFD     + + W S++  Y R+K
Sbjct: 50  QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
             +  LE+++ M  +G++P+ +TF+ VL        +   V  H  + + G E    +  
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            L+ MY K   ++ AR VFD M  RD + WN+M+AG   +E   EA + F +M L G E 
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           +  + +++         + L R +H  V +   DF   +  GL+  YSKCG ++ A ++F
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVF 286

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT-YSIILTAQPAVS- 396
             M +  D VSW  M++G+  NG     +  F +M    VR N  +  S  L A   +  
Sbjct: 287 DQMVDQDD-VSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL 345

Query: 397 --PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               ++H   ++   +    V T L+  Y K G  ++A ++F  +  +D+VAWSA++A  
Sbjct: 346 EKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAAL 405

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q G  E A+ +++++ ++ +KPN  T  S++ AC A  + ++ GK  H  ++KA +++ 
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC-ADLSLLKLGKSIHCFTVKADMDSD 464

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L   +ALV+MY+K G   +A   F R   RD+V+WNS+I GYAQ G    A+++F ++R 
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV-----NEHHIYPTMEHYSCMVDLYSR 629
             +  D  T +GV+ AC     +D+G     ++V     ++ H+       + ++D+Y++
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV------KNALIDMYAK 578

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G L  A  + N+  F      W  ++AA
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 230/494 (46%), Gaps = 17/494 (3%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           ++K + LF     R+ V ++ ++    +    +EAL+LF  ++   +     TL S+L  
Sbjct: 380 TEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPA 439

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  L     G+ +HC  VK+    D++  T+LV +Y +          F+ M+  ++V+W
Sbjct: 440 CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTW 499

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            SL++GYA+       +++F+++++  I P++ T   V+   A    +     +H +++K
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK 559

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFE 266
            G E    V NALI MY K   +  A  +F+  +  +D +TWN ++A Y+ N    EA  
Sbjct: 560 LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAIS 619

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           +F+ M L        TFVSV+   A     R     H+ +++ G   +  +   L+  Y+
Sbjct: 620 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 679

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG+++ + K+F+ M + KD VSW AM+SG+  +G  D A+  F  M    V+ +  ++ 
Sbjct: 680 KCGQLDYSEKLFNEM-DHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFV 738

Query: 387 IILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID- 440
            +L+A       +      H+   K + +        +++   + G+ DE     +++  
Sbjct: 739 SVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPV 798

Query: 441 EKDIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           E D   W A+L       + + G V +   +  E   P  F   S I A        + G
Sbjct: 799 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYA--------QSG 850

Query: 500 KQFHACSIKAKLNN 513
           +   A   ++K+N+
Sbjct: 851 RWADAGKARSKMND 864



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 198/402 (49%), Gaps = 17/402 (4%)

Query: 267 TFNNMGLAGAE---LTRSTFVSVI---KLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           +F ++  A +E   L+ ST+ + +   +L ++ K L    Q+H+Q++ +G    H+I T 
Sbjct: 10  SFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSI-TH 68

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  YS   K + A  +F        ++ W +MI  + ++   + A+  +  M  +G+ P
Sbjct: 69  LINLYSLFHKCDLARSVFDSTPNPSRIL-WNSMIRAYTRSKQYNEALEMYYCMVEKGLEP 127

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + +T++ +L A       Q     H  I +   E+   +G  L++ Y K G L  A +VF
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           + + ++D+VAW+AM+AG +Q  D   AV  +R +   GV+P+  +  ++       S  +
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS-NI 246

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E  +  H    +   ++A  VS+ L+ +YSK G+++ A  VF +   +D VSW +M+ GY
Sbjct: 247 ELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A +G   + LE+F +M+  ++  + ++ +    A      +++G++     + +      
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +     MV +Y++ G  EKA  +   +        W  ++AA
Sbjct: 365 LVATPLMV-MYAKCGETEKAKQLFWGLQ-GRDLVAWSAIIAA 404


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 290/826 (35%), Positives = 458/826 (55%), Gaps = 20/826 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           YS   + +  + P R+ V +  L+     +    +++ LF  ++  G+     TL++ LK
Sbjct: 162 YSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLK 221

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        G+Q+H +  K G   D+ V ++LVDLY +   +E   ++F  M E N V+
Sbjct: 222 ACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT 281

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  LL+GYA+      VL+LF  M    +K N FT +TVL   A+   +     +H+++I
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G E    +   L+ MY K  +  DA  VF  ++  D + W++++          E+ +
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M L      + T  S++     T  L+  + +H+ V K G + D  +   L+  Y 
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYM 461

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G + D +K++  M + +D++SW A +SG    G  D  +  F  M  EG  PN +T+ 
Sbjct: 462 KNGCVHDGTKLYESMVD-RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            IL +   +       QVHAHIIK   + +  V TAL++ Y K   L++A   F  +  +
Sbjct: 521 SILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR 580

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+  W+ ++  YAQ    E A+  +RQ+  EGVKPNEFT +  ++ C++  A++E G+Q 
Sbjct: 581 DLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSL-ASLEGGQQL 639

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H+   K+   + + V SALV MY+K G +E A  +F+   +RD ++WN++ICGYAQ+G  
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            KAL  F+ M  + +  DG+TF G+++AC+H GLV+EG+++F+ M  +  I PT++H +C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQPHD 668
           MVD+  R G  ++  D I +M  + +A +W TVL              AA +L  LQP +
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
            + Y+LLSN++A  G W +  RVR LM+ + VKKE G SW+E   + ++F++ D SHPQ 
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQI 879

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            +I+ KL+EL   L    Y P T YVL ++ +  K+  L  HSERLA+ F L++T +   
Sbjct: 880 QEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKK 939

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           ++I KNLR+C DCH V+K IS +  ++IVVRD  RFHHFK G CSC
Sbjct: 940 IRIFKNLRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 167/581 (28%), Positives = 290/581 (49%), Gaps = 8/581 (1%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           SS+L+ C         + +H   VK     D ++  SLV++Y +       R V   M +
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            +VVSWT+L+ G       +  + LF  MQ EGI PN FT +T L   +    +    Q+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H    K G  +   V +AL+ +Y K   +  A  +F GM +++ +TWN ++ GY      
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
               + F +M     +    T  +V+K CA +K L+  + +HS ++K G + +  I  GL
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  YSKCG   DA  +F  +++  D+V W+A+I+   Q G  + ++  F  M      PN
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKK-PDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414

Query: 382 GFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            +T   +L+A       Q    +HA + K  +E   +V  AL+  Y+K G + +  K++E
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            + ++D+++W+A L+G    G  +  + I+  +  EG  PN +TF S++ +C+     V 
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCL-FDVH 533

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G+Q HA  IK +L++   V +AL+ MY+K   +E A   F R   RDL +W  +I  YA
Sbjct: 534 YGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYA 593

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           Q    +KAL  F++M+++ ++ +  T  G ++ C+    ++ GQQ   ++    H+   M
Sbjct: 594 QTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHV-SDM 652

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
              S +VD+Y++ G +E+A  +   +        W T++  
Sbjct: 653 FVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 241/470 (51%), Gaps = 15/470 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +S++L   A +  +  A  +H +++K+     + +  +L+++Y K +    AR V   M 
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           DRD ++W +++ G V      ++   F  M   G      T  + +K C+    L L +Q
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H+Q  K G+  D  + + L+  Y+KCG++E ASK+F  M E  D V+W  +++G+ Q G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND-VTWNVLLNGYAQRG 293

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGT 417
            +   +  FC M    V+ N FT + +L         +    +H+ IIK  YE +  +G 
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGC 353

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
            L++ Y K G+  +A  VF+ I + DIV WSA++    Q G +E ++K++  +      P
Sbjct: 354 GLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLP 413

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           N++T  S+++A T  +  ++ G+  HAC  K      + VS+ALVTMY K G +   +++
Sbjct: 414 NQYTICSLLSAAT-NTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKL 472

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           ++    RDL+SWN+ + G    G   + L +F  M  +    +  TFI ++ +C+    V
Sbjct: 473 YESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDV 532

Query: 598 DEGQQYFDIMVNEHHIYPTME--HYSC--MVDLYSRAGMLEKAMDIINRM 643
             G+Q     V+ H I   ++  ++ C  ++D+Y++   LE A    NR+
Sbjct: 533 HYGRQ-----VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 286/826 (34%), Positives = 459/826 (55%), Gaps = 21/826 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+  P RN V +  L+  Y      +E ++++ G+R  G+    +++S V+ +CG L
Sbjct: 114 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLL 173

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GRQ+  + VKSG    + V  SL+ +     NV+    +FD M+E + +SW S+ 
Sbjct: 174 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + YA+N   +    +F  M+    + NS T ST+L VL           +H +V+K G +
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 293

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V  VCN L+ MY  +    +A  VF  M  +D I+WNS++A +V +   ++A     +M
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G  +   TF S +  C T       R LH  V+ +G+ ++  I   L+  Y K G+M
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            ++ ++   M   +DVV+W A+I G+ ++   D A+  F  M  EGV  N  T   +L+A
Sbjct: 414 SESRRVLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472

Query: 392 QPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
                        +HA+I+   +E    V  +L+  Y K G L  +  +F  +D ++I+ 
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 532

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AMLA  A  G  E  +K+  ++ S GV  ++F+FS  ++A  A  A +E+G+Q H  +
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA-AAKLAVLEEGQQLHGLA 591

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +K    +   + +A   MYSK G I    ++      R L SWN +I    +HG+ ++  
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 651

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             F EM    ++   +TF+ ++TAC+H GLVD+G  Y+D++  +  + P +EH  C++DL
Sbjct: 652 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 711

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
             R+G L +A   I++MP   +  VWR++LA+C+              L  L+P D ++Y
Sbjct: 712 LGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY 771

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VL SNM+A TG W++   VRK M  + +KK+   SW+++K+K  SF  GD +HPQ+ +IY
Sbjct: 772 VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIY 831

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           +KLE++   +K++GY  DTS  LQD D+E KE  L  HSERLA+A+ L++TP G+ ++I 
Sbjct: 832 AKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 891

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+C DCH+V K +S++  R IV+RD  RFHHF+ GLCSC DYW
Sbjct: 892 KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 188/645 (29%), Positives = 335/645 (51%), Gaps = 28/645 (4%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LFD  P RN V +N ++    R  L+ E +  F  +  LG+      ++S++  C
Sbjct: 9   KPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC 68

Query: 89  G---CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           G    +F    G QVH    KSG   DV VST+++ LY     V   R+VF++M + NVV
Sbjct: 69  GRSGSMFRE--GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 126

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVH 202
           SWTSL+ GY+     + V++++  M+ EG+  N  + S V+   G+L DE +     Q+ 
Sbjct: 127 SWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL---GRQII 183

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             V+K+G E   +V N+LISM      V  A  +FD M +RD+I+WNS+ A Y  N    
Sbjct: 184 GQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIE 243

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           E+F  F+ M     E+  +T  +++ +       +  R +H  V+K G D    +   L+
Sbjct: 244 ESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 303

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+  G+  +A+ +F  M   KD++SW ++++  + +G    A+   C M   G   N 
Sbjct: 304 RMYAGAGRSVEANLVFKQM-PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 362

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T++  L A      F+    +H  ++ +    +  +G AL++ Y K G + E+ +V   
Sbjct: 363 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 422

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  +D+VAW+A++ GYA+  D + A+  ++ +  EGV  N  T  SV++AC  P   +E+
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           GK  HA  + A   +   V ++L+TMY+K G++ S+ ++F     R++++WN+M+   A 
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYP 615
           HGH ++ L++  +MR   +  D  +F   ++A     +++EGQQ   + V    EH  + 
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 602

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV--WRTVLAA 658
               ++   D+YS+ G +    +++  +P + + ++  W  +++A
Sbjct: 603 ----FNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISA 640



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 269/544 (49%), Gaps = 12/544 (2%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +   V+  R +FD M   N VSW +++SG  R  +    +E F +M   GIKP+SF 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 182 FSTVLGVLADEG-IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            ++++      G +    VQVH  V K+G      V  A++ +Y    +V  +R VF+ M
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            DR+ ++W S++ GY       E  + +  M   G     ++   VI  C   K+  L R
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           Q+  QV+K+G++    +   L+      G ++ A+ IF  M E +D +SW ++ + + QN
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQN 239

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVG 416
           G I+ +   F  M R     N  T S +L+    V   +    +H  ++K  ++    V 
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
             LL  Y   G   EA  VF+ +  KD+++W++++A +   G +  A+ +   + S G  
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
            N  TF+S + AC  P    E+G+  H   + + L     + +ALV+MY K G +  +  
Sbjct: 360 VNYVTFTSALAACFTPD-FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG- 595
           V  +  +RD+V+WN++I GYA+     KAL  F+ MR + +  + IT + V++AC   G 
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHY-SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           L++ G+     +V+    + + EH  + ++ +Y++ G L  + D+ N +    +   W  
Sbjct: 479 LLERGKPLHAYIVSAG--FESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNA 535

Query: 655 VLAA 658
           +LAA
Sbjct: 536 MLAA 539



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 138/276 (50%), Gaps = 28/276 (10%)

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G +  A  +F+++  ++ V+W+ M++G  ++G     ++ +R++   G+KP+ F  
Sbjct: 2   YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
           +S++ AC    +   +G Q H    K+ L + + VS+A++ +Y   G +  + +VF+   
Sbjct: 62  ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE--- 599
            R++VSW S++ GY+  G  ++ ++++K MR + +  +  +   VI++C   GL+ +   
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESL 178

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G+Q    +V +  +   +   + ++ +    G ++ A  I ++M    + + W ++ AA 
Sbjct: 179 GRQIIGQVV-KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAA- 235

Query: 660 RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
                              YA  GH +E  R+  LM
Sbjct: 236 -------------------YAQNGHIEESFRIFSLM 252


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 290/837 (34%), Positives = 461/837 (55%), Gaps = 29/837 (3%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSS 83
           Y  + + +FDR   +N  ++N L+  Y R+ L+ EA++ FL +  + +  F     T   
Sbjct: 158 YPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLEL--ISVTEFQPDNFTFPC 215

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           ++K C    D   G+ VH   VK G   D+ V  +++ LY +   +++   +FD M E N
Sbjct: 216 LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN 275

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
           ++SW SL+ G++ N         F  +    +G+ P+  T  T+L V + EG V   + +
Sbjct: 276 LISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVI 335

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H M +K G      VCNALI MY K   + +A  +F  +E++  ++WNSM+  Y      
Sbjct: 336 HGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFV 395

Query: 262 MEAFETFNNMGLAGA--ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            E F+    M +     E+   T ++++  C    EL   R LH   L++   +   I  
Sbjct: 396 FETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINN 455

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
             + AY+KCG +  A  +F  M   K V SW A+I GH QNG    A++F+ +MTR G+ 
Sbjct: 456 AFIAAYAKCGSLVFAEHVFFGMN-TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGIL 514

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+ F+   +L A   +   Q    +H  +++   E +  V  +LL+ Y            
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTY 574

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE + +K+ V W+AML+GY+Q      A+ ++RQ+ S+G++P+E   +S++ AC+  SA 
Sbjct: 575 FETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA- 633

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H  ++K  L     V+ +L+ MY+K G +  +  +F R   +++ SWN MI G
Sbjct: 634 LGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITG 693

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           +  HG   KA+E+F++M+R D + D  TF+GV+ AC HAGLV EG  Y   M   + + P
Sbjct: 694 FGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEP 753

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA--------------ACRL 661
            +EHY+C++D+  RAG L +A++ IN MP    A +W ++L+              A +L
Sbjct: 754 ELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKL 813

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           ++L+ + +  Y+LLSN+YA  G W     VR+ M D  ++K+ G SWIE++ K YSF+AG
Sbjct: 814 LALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAG 873

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           + S+P S++I      L  ++ + GY PD S VL ++++  K  IL  HSE++AI FG +
Sbjct: 874 ENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFL 933

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            T  G  L+I KNLR+C DCH   K ISK  +R+IV+RD  RFHHFK+G+CSCGDYW
Sbjct: 934 NTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 288/579 (49%), Gaps = 23/579 (3%)

Query: 80  TLSSVLKTCGCLFDHVFGRQV-HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
            +  +L+ CG   +   GR++    CV S F+ D  ++T L+ +Y       + R VFD 
Sbjct: 109 AMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDR 168

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVAT 197
           +   N+  W +L+SGY RN++ D  +  F  +  V   +P++FTF  ++     +  +  
Sbjct: 169 LLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHL 228

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
              VH M +K G  +   V NA+I++Y K   + +A  +FD M +++ I+WNS++ G+  
Sbjct: 229 GKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSE 288

Query: 258 NELHMEAFETFNNMGLAGAELTR--STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           N   +EA+  F ++  +G  L    +T V+++ +C+    + +   +H   +K G+  + 
Sbjct: 289 NGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHEL 348

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI----DLAVNFFC 371
            +   L+  YSKCG + +A+ +F  + E K VVSW +MI  + + G +    DL    + 
Sbjct: 349 MVCNALIDMYSKCGCLSEAAILFRKI-ENKSVVSWNSMIGAYSREGFVFETFDLLRKMW- 406

Query: 372 QMTREGVRPNGFTYSIILTAQPA-------VSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
            M  E +  N  T   IL   PA       +S   +H + ++ +++    +  A + AY 
Sbjct: 407 -MEEELMEVNEVT---ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYA 462

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           K G L  A  VF  ++ K + +W+A++ G+AQ GD   A+  Y ++T  G+ P++F+  S
Sbjct: 463 KCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVS 522

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++ AC      ++ GK+ H   ++  L     V+ +L+++Y            F+    +
Sbjct: 523 LLLAC-GRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDK 581

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           + V WN+M+ GY+Q+    +AL +F++M    LE D I    ++ AC+    +  G++  
Sbjct: 582 NSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVH 641

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
              +    +       S M D+Y+++G L  +  I NR+
Sbjct: 642 CFALKNSLMEDNFVACSLM-DMYAKSGFLGHSQRIFNRL 679


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 290/837 (34%), Positives = 461/837 (55%), Gaps = 29/837 (3%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSS 83
           Y  + + +FDR   +N  ++N L+  Y R+ L+ EA++ FL +  + +  F     T   
Sbjct: 158 YPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLEL--ISVTEFQPDNFTFPC 215

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           ++K C    D   G+ VH   VK G   D+ V  +++ LY +   +++   +FD M E N
Sbjct: 216 LIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQN 275

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
           ++SW SL+ G++ N         F  +    +G+ P+  T  T+L V + EG V   + +
Sbjct: 276 LISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVI 335

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H M +K G      VCNALI MY K   + +A  +F  +E++  ++WNSM+  Y      
Sbjct: 336 HGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFV 395

Query: 262 MEAFETFNNMGLAGA--ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            E F+    M +     E+   T ++++  C    EL   R LH   L++   +   I  
Sbjct: 396 FETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINN 455

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
             + AY+KCG +  A  +F  M   K V SW A+I GH QNG    A++F+ +MTR G+ 
Sbjct: 456 AFIAAYAKCGSLVFAEHVFFGMN-TKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGIL 514

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+ F+   +L A   +   Q    +H  +++   E +  V  +LL+ Y            
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTY 574

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE + +K+ V W+AML+GY+Q      A+ ++RQ+ S+G++P+E   +S++ AC+  SA 
Sbjct: 575 FERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA- 633

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H  ++K  L     V+ +L+ MY+K G +  +  +F R   +++ SWN MI G
Sbjct: 634 LGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITG 693

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           +  HG   KA+E+F++M+R D + D  TF+GV+ AC HAGLV EG  Y   M   + + P
Sbjct: 694 FGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEP 753

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA--------------ACRL 661
            +EHY+C++D+  RAG L +A++ IN MP    A +W ++L+              A +L
Sbjct: 754 ELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKL 813

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           ++L+ + +  Y+LLSN+YA  G W     VR+ M D  ++K+ G SWIE++ K YSF+AG
Sbjct: 814 LALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAG 873

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           + S+P S++I      L  ++ + GY PD S VL ++++  K  IL  HSE++AI FG +
Sbjct: 874 ENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFL 933

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            T  G  L+I KNLR+C DCH   K ISK  +R+IV+RD  RFHHFK+G+CSCGDYW
Sbjct: 934 NTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/579 (26%), Positives = 289/579 (49%), Gaps = 23/579 (3%)

Query: 80  TLSSVLKTCGCLFDHVFGRQV-HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
            +  +L+ CG   +   GR++    CV S F+ D  ++T L+ +Y       + R VFD 
Sbjct: 109 AMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDR 168

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVAT 197
           +   N+  W +L+SGY RN++ D  +  F  +  V   +P++FTF  ++     +  +  
Sbjct: 169 LLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHL 228

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
              VH M +K G  +   V NA+I++Y K   + +A  +FD M +++ I+WNS++ G+  
Sbjct: 229 GKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSE 288

Query: 258 NELHMEAFETFNNMGLAGAELTR--STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           N   +EA+  F ++  +G  L    +T V+++ +C+    + +   +H   +K G+  + 
Sbjct: 289 NGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHEL 348

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI----DLAVNFFC 371
            +   L+  YSKCG + +A+ +F  + E K VVSW +MI  + + G +    DL    + 
Sbjct: 349 MVCNALIDMYSKCGCLSEAAILFRKI-ENKSVVSWNSMIGAYSREGFVFETFDLLRKMW- 406

Query: 372 QMTREGVRPNGFTYSIILTAQPA-------VSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
            M  E +  N  T   IL   PA       +S   +H + ++ +++    +  A + AY 
Sbjct: 407 -MEEELMEVNEVT---ILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYA 462

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           K G L  A  VF  ++ K + +W+A++ G+AQ GD   A+  Y ++T  G+ P++F+  S
Sbjct: 463 KCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVS 522

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++ AC      ++ GK+ H   ++  L     V+ +L+++Y            F+R   +
Sbjct: 523 LLLAC-GRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDK 581

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           + V WN+M+ GY+Q+    +AL +F++M    LE D I    ++ AC+    +  G++  
Sbjct: 582 NSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVH 641

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
              +    +       S M D+Y+++G L  +  I NR+
Sbjct: 642 CFALKNSLMEDNFVACSLM-DMYAKSGFLGHSQRIFNRL 679


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 282/796 (35%), Positives = 451/796 (56%), Gaps = 20/796 (2%)

Query: 61   EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLV 120
            EA+ LF  +  LG+       SSVL  C  +     G Q+H   +K GF+ D  V  +LV
Sbjct: 254  EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 313

Query: 121  DLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
             LY    ++     +F +M++ + V++ +L++G ++    ++ +ELF RMQ++G++P+S 
Sbjct: 314  SLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSN 373

Query: 181  TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            T ++++   + +G + +  Q+H    K G      +  AL+++Y K   +  A   F   
Sbjct: 374  TLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET 433

Query: 241  EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            E  + + WN M+  Y   +    +F  F  M +      + T+ S++K C    +L L  
Sbjct: 434  EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493

Query: 301  QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            Q+HSQ++K     +  + + L+  Y+K GK++ A  I  +    KDVVSWT MI+G+ Q 
Sbjct: 494  QIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDIL-IRFAGKDVVSWTTMIAGYTQY 552

Query: 361  GAIDLAVNFFCQMTREGVRPN--GFTYSIILTA--QPAVSPFQVHAHIIKTNYEKSFSVG 416
               D A+  F QM   G+R +  G T ++   A  Q      Q+HA    + +       
Sbjct: 553  NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 612

Query: 417  TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
             AL+  Y K G ++EA   FE  +  D +AW+A+++G+ Q G+ E A++++ ++  EG+ 
Sbjct: 613  NALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGID 672

Query: 477  PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
             N FTF S + A  + +A ++QGKQ HA   K   ++   V +A+++MY+K G+I  A +
Sbjct: 673  SNNFTFGSAVKA-ASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKK 731

Query: 537  VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
             F     ++ VSWN+MI  Y++HG   +AL+ F +M   ++  + +T +GV++AC+H GL
Sbjct: 732  QFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 791

Query: 597  VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
            VD+G +YF+ M  E+ + P  EHY C+VD+ +RAG+L +A D I  MP    A VWRT+L
Sbjct: 792  VDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLL 851

Query: 657  AAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            +AC               L+ L+P DSA YVLLSN+YA    W  R   R+ M ++ VKK
Sbjct: 852  SACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKK 911

Query: 703  EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
            E G SWIEVKN  +SF  GD +HP +++I+   ++L+ R  + GY  D   +L ++  E 
Sbjct: 912  EPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQ 971

Query: 763  KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
            K+  +  HSE+LAI+FGL++ PA  P+ ++KNLRVC DCH  IK +SK+  R+I+VRD  
Sbjct: 972  KDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAY 1031

Query: 823  RFHHFKEGLCSCGDYW 838
            RFHHF+ G CSC DYW
Sbjct: 1032 RFHHFEGGACSCKDYW 1047



 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 181/610 (29%), Positives = 309/610 (50%), Gaps = 12/610 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GC 90
           +FD  P+R    +N+++ E    SL  +   LF  +    +     T S VL+ C     
Sbjct: 125 VFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSV 184

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            FD V   Q+H   +  G  +   V   L+DLY R   V+  RRVFD +   +  SW ++
Sbjct: 185 AFDVV--EQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SG ++N+     + LF  M V GI P  + FS+VL        +    Q+H +V+K G 
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 302

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              T VCNAL+S+Y     +  A  +F  M  RD++T+N+++ G        +A E F  
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L G E   +T  S++  C++   L   +QLH+   K G   +  I   L+  Y+KC  
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSD 422

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A   F +  E+++VV W  M+  +     +  +   F QM  E + PN +TY  IL 
Sbjct: 423 IETALNYF-LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 481

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
               +       Q+H+ IIKT+++ +  V + L++ Y K G LD A  +      KD+V+
Sbjct: 482 TCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 541

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ M+AGY Q    + A+  +RQ+   G++ +E   ++ ++AC A   A+++G+Q HA +
Sbjct: 542 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-AGLQALKEGQQIHAQA 600

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
             +  ++ L   +ALVT+YSK GNIE A   F++    D ++WN+++ G+ Q G+ ++AL
Sbjct: 601 CVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 660

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            VF  M R+ ++ +  TF   + A +    + +G+Q   ++    +   T E  + ++ +
Sbjct: 661 RVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET-EVCNAIISM 719

Query: 627 YSRAGMLEKA 636
           Y++ G +  A
Sbjct: 720 YAKCGSISDA 729



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 172/561 (30%), Positives = 282/561 (50%), Gaps = 11/561 (1%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L   LKT G L +   GR++H + +K GF  +  +S  L+D Y+   +++   +VFD+M 
Sbjct: 74  LEGCLKTNGSLDE---GRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMP 130

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV- 199
           E  + +W  ++   A   ++ +V  LF RM  E + PN  TFS VL       +    V 
Sbjct: 131 ERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVE 190

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  +I  G    T VCN LI +Y ++  V  AR VFDG+  +D  +W +M++G   NE
Sbjct: 191 QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNE 250

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
             +EA   F +M + G   T   F SV+  C   + L +  QLH  VLK G   D  +  
Sbjct: 251 CEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 310

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y   G +  A  IFS M + +D V++  +I+G  Q G  + A+  F +M  +G+ 
Sbjct: 311 ALVSLYFHLGSLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLE 369

Query: 380 PNGFTYSIILTAQPA----VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+  T + ++ A  +     S  Q+HA+  K  +  +  +  ALLN Y K   ++ A   
Sbjct: 370 PDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNY 429

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F   + +++V W+ ML  Y  + D   + +I+RQ+  E + PN++T+ S++  C      
Sbjct: 430 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL-GD 488

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +E G+Q H+  IK        V S L+ MY+K G +++A ++  R   +D+VSW +MI G
Sbjct: 489 LELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 548

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y Q+    KAL  F++M  + +  D +     ++AC     + EGQQ             
Sbjct: 549 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSS 607

Query: 616 TMEHYSCMVDLYSRAGMLEKA 636
            +   + +V LYS+ G +E+A
Sbjct: 608 DLPFQNALVTLYSKCGNIEEA 628



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 260/541 (48%), Gaps = 22/541 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           + +F    QR+ V YN L+    +    ++A+ LF  ++  GL    +TL+S++  C   
Sbjct: 326 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSD 385

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G LF    G+Q+H    K GFA +  +  +L++LY + +++E     F +    NVV W 
Sbjct: 386 GTLFS---GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWN 442

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            +L  Y           +F +MQ+E I PN +T+ ++L      G +    Q+H+ +IK 
Sbjct: 443 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 502

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             ++   VC+ LI MY K   +  A  +      +D ++W +M+AGY       +A  TF
Sbjct: 503 SFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 562

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G         + +  CA  + L+  +Q+H+Q   +G   D   +  L+  YSKC
Sbjct: 563 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKC 622

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +E+A   F    E  D ++W A++SG  Q+G  + A+  F +M REG+  N FT+   
Sbjct: 623 GNIEEAYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSA 681

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           + A    +      QVHA I KT Y+    V  A+++ Y K G + +A K F  +  K+ 
Sbjct: 682 VKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNE 741

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+W+AM+  Y++ G    A+  + Q+    V+PN  T   V++AC+     V++G ++  
Sbjct: 742 VSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI-GLVDKGIEYFE 800

Query: 505 C-----SIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQ 558
                  +  K  + +CV    V M ++ G +  A + + +   + D + W +++     
Sbjct: 801 SMNTEYGLAPKPEHYVCV----VDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVV 856

Query: 559 H 559
           H
Sbjct: 857 H 857



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 35/302 (11%)

Query: 377 GVRPNGFTYSIIL-----TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           G+RPN  T   +L     T        ++H+ I+K  ++ +  +   LL+ Y+ KG LD 
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A KVF+ + E+ I  W+ M+   A    +     ++ ++ +E V PNE TFS V+ AC  
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
            S A +  +Q HA  I   L  +  V + L+ +YS+ G ++ A  VF     +D  SW +
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ--------- 602
           MI G +++    +A+ +F +M    +      F  V++AC     ++ G+Q         
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301

Query: 603 --------------YFDI--MVNEHHIYPTMEH-----YSCMVDLYSRAGMLEKAMDIIN 641
                         YF +  +++  HI+  M       Y+ +++  S+ G  EKAM++  
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 361

Query: 642 RM 643
           RM
Sbjct: 362 RM 363



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 131/276 (47%), Gaps = 4/276 (1%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F+++   + + +N L+  + +   ++EAL +F  + R G+     T  S +K      + 
Sbjct: 632 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANM 691

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+QVH    K+G+  +  V  +++ +Y +  ++ D ++ F +++  N VSW ++++ Y
Sbjct: 692 KQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAY 751

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGGEVV 213
           +++      L+ F +M    ++PN  T   VL   +  G+V   ++   +M  + G    
Sbjct: 752 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPK 811

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
                 ++ M  ++ ++  A+     M  + D++ W ++++  V ++ +ME  E   +  
Sbjct: 812 PEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHK-NMEIGEFAAHHL 870

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
           L       +T+V +  L A  ++   AR L  Q +K
Sbjct: 871 LELEPEDSATYVLLSNLYAVCRKWD-ARDLTRQKMK 905


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 302/827 (36%), Positives = 473/827 (57%), Gaps = 50/827 (6%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            LFD    R+ V +N ++  Y    L  EAL LF    R GL     TL ++         
Sbjct: 784  LFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTL--------- 834

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF---DDMNESNVVSWTSL 150
                            AR V    ++++  ++      G ++F   DD + S+V++W   
Sbjct: 835  ----------------ARVVKSKQNVLEWQLKQLKAY-GTKLFMYDDDDDGSDVIAWNKT 877

Query: 151  LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            LS + +       ++ F  M    +  +  TF  +L V+A    +    Q+H +V+++G 
Sbjct: 878  LSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGL 937

Query: 211  EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            + V SV N LI+MY+K+  V  AR VF  M + D ++WN+M++G   + L   +   F +
Sbjct: 938  DQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVD 997

Query: 271  MGLAGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G    + T  SV++ C++      LA Q+H+  +K G+  D  + T L+  YSK G
Sbjct: 998  LLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSG 1057

Query: 330  KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            KME+A  +F + ++  D+ SW AM+ G++ +G    A+  +  M   G R N  T +   
Sbjct: 1058 KMEEAEFLF-VNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAA 1116

Query: 390  TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
             A   +       Q+ A ++K  +     V + +L+ Y+K G ++ A ++F  I   D V
Sbjct: 1117 KAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDV 1176

Query: 446  AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            AW+ M++G  + G  E A+  Y  +    V+P+E+TF++++ AC+  +A +EQG+Q HA 
Sbjct: 1177 AWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTA-LEQGRQIHAN 1235

Query: 506  SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            ++K        V ++LV MY+K GNIE A  +FKR     + SWN+MI G AQHG+ ++A
Sbjct: 1236 TVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEA 1295

Query: 566  LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
            L+ F+EM+ + +  D +TFIGV++AC+H+GLV E  + F  M   + I P +EHYSC+VD
Sbjct: 1296 LQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVD 1355

Query: 626  LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
              SRAG + +A  +I+ MPF ASA+++RT+L ACR              L++L+P DSA 
Sbjct: 1356 ALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAA 1415

Query: 672  YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
            YVLLSN+YAA   W+  A  R +M    VKK+ G+SW+++KNK + F+AGD SH +++ I
Sbjct: 1416 YVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVI 1475

Query: 732  YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
            Y+K+E +  R+++ GY PDT + L D+++E KE  L  HSE+LAIA+GL+ TP    L++
Sbjct: 1476 YNKVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRV 1535

Query: 792  VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +KNLRVCGDCH  IK ISK+  R++V+RD NRFHHF+ G+CSCGDYW
Sbjct: 1536 IKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/623 (27%), Positives = 285/623 (45%), Gaps = 45/623 (7%)

Query: 32   QSLFDRSPQ--RNFVEYNRLLFEYC---RDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
            + LFD +P   R+ V +N +L  +    RD  H     LF  +RR  +     TL+ V K
Sbjct: 681  RKLFDTTPDTSRDLVTWNAILSAHADKARDGFH-----LFRLLRRSFVSATRHTLAPVFK 735

Query: 87   TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
             C           +H   VK G   DV V+ +LV++Y +   + + R +FD M   +VV 
Sbjct: 736  MCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVL 795

Query: 147  WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
            W  ++  Y    +    L LF      G++P+  T  T+                   V+
Sbjct: 796  WNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTL-----------------ARVV 838

Query: 207  KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            K+   V+      L +   K  M  D        +  D I WN  ++ ++      EA +
Sbjct: 839  KSKQNVLEWQLKQLKAYGTKLFMYDDD------DDGSDVIAWNKTLSWFLQRGETWEAVD 892

Query: 267  TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
             F +M  +       TFV ++ + A    L L +Q+H  V+++G+D   ++   L+  Y 
Sbjct: 893  CFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYV 952

Query: 327  KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
            K G +  A  +F  M E+ D+VSW  MISG   +G  + +V  F  + R G+ P+ FT +
Sbjct: 953  KTGSVSRARTVFWQMNEV-DLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVA 1011

Query: 387  IILTAQPAVS-----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             +L A  ++        Q+HA  +K        V T L++ Y K G ++EA  +F   D 
Sbjct: 1012 SVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDG 1071

Query: 442  KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
             D+ +W+AM+ GY   GD   A+++Y  +   G + N+ T ++   A       ++QGKQ
Sbjct: 1072 FDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGG-LVGLKQGKQ 1130

Query: 502  FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
              A  +K   N  L V S ++ MY K G +ESA  +F      D V+W +MI G  ++G 
Sbjct: 1131 IQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQ 1190

Query: 562  TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY- 620
             + AL  +  MR   ++ D  TF  ++ AC+    +++G+Q   I  N   +    + + 
Sbjct: 1191 EEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQ---IHANTVKLNCAFDPFV 1247

Query: 621  -SCMVDLYSRAGMLEKAMDIINR 642
             + +VD+Y++ G +E A  +  R
Sbjct: 1248 MTSLVDMYAKCGNIEDARGLFKR 1270



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 208/443 (46%), Gaps = 33/443 (7%)

Query: 200  QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVAGYVT 257
            + H  ++ +G      + N LI+MY K   +  AR +FD   D  RD +TWN++++ +  
Sbjct: 647  RAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHAD 706

Query: 258  NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                 + F  F  +  +    TR T   V K+C  +     A  LH   +K G+ +D  +
Sbjct: 707  KA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFV 764

Query: 318  RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
               L+  Y+K G++ +A  +F  M  ++DVV W  M+  ++  G    A+  F +  R G
Sbjct: 765  AGALVNIYAKFGRIREARVLFDGM-GLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTG 823

Query: 378  VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            +RP+  T   +             A ++K+  +         L AY  K  +       +
Sbjct: 824  LRPDDVTLCTL-------------ARVVKSK-QNVLEWQLKQLKAYGTKLFM-----YDD 864

Query: 438  LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
              D  D++AW+  L+ + Q G+T  AV  +  + +  V  +  TF  V+ +  A    +E
Sbjct: 865  DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTF-VVMLSVVAGLNCLE 923

Query: 498  QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
             GKQ H   +++ L+  + V + L+ MY K G++  A  VF +  + DLVSWN+MI G A
Sbjct: 924  LGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCA 983

Query: 558  QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP-- 615
              G  + ++ +F ++ R  L  D  T   V+ AC+  G    G  +    ++   +    
Sbjct: 984  LSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG----GGCHLATQIHACAMKAGV 1039

Query: 616  TMEHY--SCMVDLYSRAGMLEKA 636
             ++ +  + ++D+YS++G +E+A
Sbjct: 1040 VLDSFVSTTLIDVYSKSGKMEEA 1062



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 187/425 (44%), Gaps = 39/425 (9%)

Query: 260 LHMEAFETFNNMGLAGAELTRST--FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           L + A  +  N  +  A L  S   + S+++      +L L ++ H+++L +G   D  +
Sbjct: 604 LRLRAATSTANPFIPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFL 663

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHLQNG-----AIDLAVNFFC 371
              L+  YSKCG +  A K+F    +  +D+V+W A++S H            L    F 
Sbjct: 664 TNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARDGFHLFRLLRRSFV 723

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
             TR  + P       +L+A P+ +   +H + +K   +    V  AL+N Y K G + E
Sbjct: 724 SATRHTLAP--VFKMCLLSASPSAAE-SLHGYAVKIGLQWDVFVAGALVNIYAKFGRIRE 780

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A  +F+ +  +D+V W+ M+  Y   G    A+ ++ +    G++P++ T  ++     +
Sbjct: 781 ARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKS 840

Query: 492 PSAAVE-QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
               +E Q KQ  A   K             + MY                   D+++WN
Sbjct: 841 KQNVLEWQLKQLKAYGTK-------------LFMYDDD------------DDGSDVIAWN 875

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
             +  + Q G T +A++ F +M    +  DG+TF+ +++       ++ G+Q   I+V  
Sbjct: 876 KTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS 935

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSA 670
             +   +   +C++++Y + G + +A  +  +M        W T+++ C L  L+     
Sbjct: 936 -GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN-EVDLVSWNTMISGCALSGLEECSVG 993

Query: 671 IYVLL 675
           ++V L
Sbjct: 994 MFVDL 998


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 293/826 (35%), Positives = 476/826 (57%), Gaps = 21/826 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYC-RDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           QS+F+   ++N V +N +L  Y  +    + A+ LF  +   G+     T  +VL +   
Sbjct: 113 QSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVD 172

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                 G+ +H    +S  + DV V+T+LV+ Y +  ++ D R+VFD M   +V +W S+
Sbjct: 173 PDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSM 232

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +S Y+ ++ +     +F RMQ EG + +  TF ++L    +   +     V   + +   
Sbjct: 233 ISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSF 292

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E+   V  ALI+MY + +   DA  VF  M+  + ITW++++  +  +    EA   F  
Sbjct: 293 ELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRM 352

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G    R TF+S++    T   L    ++H  + ++G+D    +R  L+  Y +C  
Sbjct: 353 MQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCES 412

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            +DA  +F  + E+ +++SW +MI  ++Q    D A+  F  M ++G++P+   +  IL 
Sbjct: 413 PDDARTVFDQL-ELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILG 471

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A    S  +    VH  + ++    S  V T+L+N Y K G LD A  + + +DE+ I A
Sbjct: 472 ACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITA 531

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ ++ GYA  G +  A++ Y++L  E +  ++ TF SV+NACT+ S ++ +GK  H+ +
Sbjct: 532 WNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTS-STSLAEGKMIHSNA 590

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           ++  L++ + V +AL  MYSK G++E+A  +F     R  VSWN M+  YAQHG +++ L
Sbjct: 591 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 650

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++ ++M ++ ++ +GITF+ V+++C+HAGL+ EG QYF  + ++  I    EHY C+VDL
Sbjct: 651 KLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 710

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
             RAG L++A   I++MP       W ++L ACR              L+ L P +S+  
Sbjct: 711 LGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSAS 770

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           V+LSN+Y+  G W+  A++R+ M  R+VKK  G S I+VKNK + F   D SHP++ +IY
Sbjct: 771 VVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIY 830

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
            K+EEL   +++AGY PDT  VL D+D+E KE++L+ HSE+LAIAFGL++TP  + L I 
Sbjct: 831 DKVEELCFAMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIF 890

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLRVC DCHT  K ISK+  R+IVVRD +RFHHF++G CSC DYW
Sbjct: 891 KNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/633 (28%), Positives = 338/633 (53%), Gaps = 17/633 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F +   RN V +N ++  Y      QEAL LF  +   G+     TL +VL +CG   + 
Sbjct: 15  FGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFREL 74

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G  VH   ++ GF ++  V+T+L+++Y +   + D + VF++M E NVV+W ++L  Y
Sbjct: 75  RDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVY 134

Query: 155 ARNKMNDRV-LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +      ++ +ELF RM +EG+K N  TF  VL  + D   +     +H+ V ++   + 
Sbjct: 135 SLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLD 194

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL++ Y K   + DAR VFDGM  R   TWNSM++ Y  +E   EAF  F  M  
Sbjct: 195 VFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQ 254

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G    R TF+S++  C   + L+  + +   + +   + D  + T L+  Y++C   ED
Sbjct: 255 EGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPED 314

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A+++F  M++  ++++W+A+I+    +G    A+ +F  M +EG+ PN  T+  +L    
Sbjct: 315 AAQVFGRMKQ-TNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 373

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             S  +    +H  I +   + + ++  AL+N Y +    D+A  VF+ ++  ++++W++
Sbjct: 374 TPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNS 433

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+  Y Q    + A++++R +  +G++P+   F +++ ACT  S    + K  H C  ++
Sbjct: 434 MIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTR-KLVHQCVEES 492

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L  +  V ++LV MY+K G ++ A  + +   ++ + +WN +I GYA HG +++ALE +
Sbjct: 493 GLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAY 552

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSCMVD 625
           ++++ + +  D +TFI V+ ACT +  + EG+     M++ + +   ++      + + +
Sbjct: 553 QKLQLEAIPVDKVTFISVLNACTSSTSLAEGK-----MIHSNAVECGLDSDVIVKNALTN 607

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +YS+ G +E A  I + MP   SA  W  +L A
Sbjct: 608 MYSKCGSMENARRIFDSMPI-RSAVSWNGMLQA 639



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 273/540 (50%), Gaps = 9/540 (1%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y R  ++ D    F  +   NVVSW  ++S Y+  K     L LFH M +EG+ PN+ T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
              VL        +   + VH + ++ G    T V  AL++MY K   + DA++VF+ M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 242 DRDSITWNSMVAGYVTNELHME-AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
           +++ +TWN+M+  Y       + A E F  M L G +    TF++V+        LR  +
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +HS V ++    D  + T L+  Y+KCG + DA K+F  M   + V +W +MIS +  +
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM-PCRSVGTWNSMISAYSIS 239

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVG 416
                A   F +M +EG R +  T+  IL A       Q    V   I +T++E    VG
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           TAL+  Y +    ++AA+VF  + + +++ WSA++  +A  G    A++ +R +  EG+ 
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PN  TF S++N  T PS  +E+  + H    +  L++   + +ALV +Y +  + + A  
Sbjct: 360 PNRVTFISLLNGFTTPS-GLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF +    +L+SWNSMI  Y Q      AL++F+ M++Q ++ D + F+ ++ ACT  G 
Sbjct: 419 VFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGS 477

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
               ++     V E  +  +    + +V++Y++AG L+ A  I+  M      T W  ++
Sbjct: 478 HGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLI 536


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 283/829 (34%), Positives = 455/829 (54%), Gaps = 23/829 (2%)

Query: 29   KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
            K+ + +FD+ P+R+ V +N ++    +     EA++ F  ++ +G+     +L ++    
Sbjct: 181  KRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGI 240

Query: 89   GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
              L +    R +H    +  F+    VS  L+DLY +  +V+  RRVFD M + + VSW 
Sbjct: 241  CKLSNIELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWG 298

Query: 149  SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            ++++GYA N     VLELF +M++  ++ N  +  +     A+   +    ++H   ++ 
Sbjct: 299  TMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQ 358

Query: 209  GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
              +    V   L+ MY K      A+ +F G++ RD + W++++A  V      EA   F
Sbjct: 359  RIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLF 418

Query: 269  NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
              M     +  R T +S++  CA    L+L + +H   +K  +D D +  T L+  Y+KC
Sbjct: 419  QEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKC 478

Query: 329  GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            G    A   F+ M   +D+V+W ++I+G+ Q G    A++ F ++    + P+  T   +
Sbjct: 479  GFFTAALTTFNRMSS-RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGV 537

Query: 389  LTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKD 443
            + A   ++       +H  I+K  +E    V  AL++ Y K G L  A  +F   D  KD
Sbjct: 538  VPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKD 597

Query: 444  IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
             V W+ ++A Y Q G  + A+  + Q+  E   PN  TF SV+ A  A  AA  +G  FH
Sbjct: 598  EVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPA-AAYLAAFREGMAFH 656

Query: 504  ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
            AC I+    +   V ++L+ MY+K G +  + ++F     +D VSWN+M+ GYA HGH  
Sbjct: 657  ACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGD 716

Query: 564  KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            +A+ +F  M+   ++ D ++F+ V++AC H GLV+EG++ F  M +++HI P +EHY+CM
Sbjct: 717  RAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACM 776

Query: 624  VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
            VDL  RAG+ ++ +  I  MP    A VW  +L +CR              L+ L+P + 
Sbjct: 777  VDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNP 836

Query: 670  AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
            A +V+LS++YA +G W +  + R  MND  +KK  G SW+E+KNK ++F  GD SHPQ  
Sbjct: 837  AHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLE 896

Query: 730  QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
             ++     L  +++  GY PD S VLQ++++E KE  L  HSERLAI F L+ TP G+ +
Sbjct: 897  SMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTI 956

Query: 790  QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            QIVKNLRVC DCHT  K ISK+  R I+VRD  RFHHF++G+CSC DYW
Sbjct: 957  QIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 192/678 (28%), Positives = 343/678 (50%), Gaps = 31/678 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FD +P  + + +N ++  Y R   + EAL ++  +   GL     T + VLK C   
Sbjct: 83  RSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGA 142

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G   H E  + G  RDV +   LVD+Y +  +++  R VFD M + +VV+W +++
Sbjct: 143 LNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMI 202

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G ++++     ++ F  MQ+ G++P+S +   +   +     +     +H  V +   +
Sbjct: 203 AGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--D 260

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             ++V N LI +Y K   V  AR VFD M D+D ++W +M+AGY  N   +E  E F+ M
Sbjct: 261 FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L    + + + VS     A T +L   +++H   L+  ID D  + T LMV Y+KCG+ 
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E A ++F  ++  +D+V+W+A+I+  +Q G  + A++ F +M  + ++PN  T   IL A
Sbjct: 381 EKAKQLFWGLQG-RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPA 439

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +S  +    +H   +K + +   S GTAL++ Y K G    A   F  +  +DIV W
Sbjct: 440 CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTW 499

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++++ GYAQIGD   A+ ++ +L    + P+  T   V+ AC A    ++QG   H   +
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPAC-ALLNDLDQGTCIHGLIV 558

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVF-KRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           K    +   V +AL+ MY+K G++ SA  +F K    +D V+WN +I  Y Q+GH K+A+
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             F +MR ++   + +TF+ V+ A  +     EG  +   ++    +  T+   S ++D+
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS-LIDM 677

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQ 686
           Y++ G L  +  + N M    + + W  +L+                     YA  GH  
Sbjct: 678 YAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSG--------------------YAVHGHGD 716

Query: 687 ERARVRKLMNDRKVKKEA 704
               +  LM + +V+ ++
Sbjct: 717 RAIALFSLMQESQVQIDS 734



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 167/569 (29%), Positives = 292/569 (51%), Gaps = 20/569 (3%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H + + SGF    ++ T L++LY   +  +  R VFD     + + W S++  Y R+K
Sbjct: 50  QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 108

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
             +  LE+++ M  +G++P+ +TF+ VL        +   V  H  + + G E    +  
Sbjct: 109 QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            L+ MY K   ++ AR VFD M  RD + WN+M+AG   +E   EA + F +M L G E 
Sbjct: 169 GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           +  + +++         + L R +H  V +   DF   +  GL+  YSKCG ++ A ++F
Sbjct: 229 SSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLIDLYSKCGDVDVARRVF 286

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT-YSIILTAQPAVS- 396
             M +  D VSW  M++G+  NG     +  F +M    VR N  +  S  L A   +  
Sbjct: 287 DQMVDQDD-VSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL 345

Query: 397 --PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               ++H   ++   +    V T L+  Y K G  ++A ++F  +  +D+VAWSA++A  
Sbjct: 346 EKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAAL 405

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q G  E A+ +++++ ++ +KPN  T  S++ AC A  + ++ GK  H  ++KA +++ 
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPAC-ADLSLLKLGKSIHCFTVKADMDSD 464

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L   +ALV+MY+K G   +A   F R   RD+V+WNS+I GYAQ G    A+++F ++R 
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV-----NEHHIYPTMEHYSCMVDLYSR 629
             +  D  T +GV+ AC     +D+G     ++V     ++ H+       + ++D+Y++
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV------KNALIDMYAK 578

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G L  A  + N+  F      W  ++AA
Sbjct: 579 CGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 229/494 (46%), Gaps = 17/494 (3%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           ++K + LF     R+ V ++ ++    +    +EAL+LF  ++   +     TL S+L  
Sbjct: 380 TEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPA 439

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  L     G+ +HC  VK+    D++  T+LV +Y +          F+ M+  ++V+W
Sbjct: 440 CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTW 499

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            SL++GYA+       +++F+++++  I P++ T   V+   A    +     +H +++K
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK 559

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFE 266
            G E    V NALI MY K   +  A  +F+  +  +D +TWN ++A Y+ N    EA  
Sbjct: 560 LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAIS 619

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           +F+ M L        TFVSV+   A     R     H+ +++ G   +  +   L+  Y+
Sbjct: 620 SFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYA 679

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG++  + K+F+ M + KD VSW AM+SG+  +G  D A+  F  M    V+ +  ++ 
Sbjct: 680 KCGQLXYSEKLFNEM-DHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFV 738

Query: 387 IILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID- 440
            +L+A       +      H+   K + +        +++   + G+ DE     +++  
Sbjct: 739 SVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPV 798

Query: 441 EKDIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           E D   W A+L       + + G V +   +  E   P  F   S I A        + G
Sbjct: 799 EPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYA--------QSG 850

Query: 500 KQFHACSIKAKLNN 513
           +   A   ++K+N+
Sbjct: 851 RWADAGKARSKMND 864



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 188/384 (48%), Gaps = 11/384 (2%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T + ++   +L ++ K L    Q+H+Q++ +G    H+I T L+  YS   K + A  +F
Sbjct: 28  TYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVF 86

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
                   ++ W +MI  + ++   + A+  +  M  +G+ P+ +T++ +L A       
Sbjct: 87  DSTPNPSRIL-WNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNL 145

Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           Q     H  I +   E+   +G  L++ Y K G L  A +VF+ + ++D+VAW+AM+AG 
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +Q  D   AV  +R +   GV+P+  +  ++       S  +E  +  H    +   ++A
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS-NIELCRSIHGYVFRRDFSSA 264

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             VS+ L+ +YSK G+++ A  VF +   +D VSW +M+ GYA +G   + LE+F +M+ 
Sbjct: 265 --VSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKL 322

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
            ++  + ++ +    A      +++G++     + +      +     MV +Y++ G  E
Sbjct: 323 GNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV-MYAKCGETE 381

Query: 635 KAMDIINRMPFAASATVWRTVLAA 658
           KA  +   +        W  ++AA
Sbjct: 382 KAKQLFWGLQ-GRDLVAWSAIIAA 404


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 288/839 (34%), Positives = 463/839 (55%), Gaps = 36/839 (4%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQ----------------EALNLFLGIRRLGLPLF 77
            L D   +  FV+  R +F+  R   H                 EA+ LF  +  LG+   
Sbjct: 188  LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 247

Query: 78   GSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
                SSVL  C  +     G Q+H   +K GF+ D  V  +LV LY    N+     +F 
Sbjct: 248  PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 307

Query: 138  DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            +M++ + V++ +L++G ++    ++ +ELF RM ++G++P+S T ++++   + +G +  
Sbjct: 308  NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367

Query: 198  AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
              Q+H    K G      +  AL+++Y K   +  A   F   E  + + WN M+  Y  
Sbjct: 368  GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 427

Query: 258  NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
             +    +F  F  M +      + T+ S++K C    +L L  Q+HSQ++K     +  +
Sbjct: 428  LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 487

Query: 318  RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
             + L+  Y+K GK++ A  I  +    KDVVSWT MI+G+ Q    D A+  F QM   G
Sbjct: 488  CSVLIDMYAKLGKLDTAWDIL-IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 546

Query: 378  VRPN--GFTYSIILTA--QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            +R +  G T ++   A  Q      Q+HA    + +        AL+  Y + G ++E+ 
Sbjct: 547  IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 606

Query: 434  KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
              FE  +  D +AW+A+++G+ Q G+ E A++++ ++  EG+  N FTF S + A  + +
Sbjct: 607  LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA-ASET 665

Query: 494  AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            A ++QGKQ HA   K   ++   V +AL++MY+K G+I  A + F     ++ VSWN++I
Sbjct: 666  ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 725

Query: 554  CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
              Y++HG   +AL+ F +M   ++  + +T +GV++AC+H GLVD+G  YF+ M +E+ +
Sbjct: 726  NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 785

Query: 614  YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC-------------- 659
             P  EHY C+VD+ +RAG+L +A + I  MP    A VWRT+L+AC              
Sbjct: 786  SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 845

Query: 660  RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
             L+ L+P DSA YVLLSN+YA +  W  R   R+ M ++ VKKE G SWIEVKN  +SF 
Sbjct: 846  HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 905

Query: 720  AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
             GD +HP +++I+   ++L+ R  + GY  D   +L ++  E K+ I+  HSE+LAI+FG
Sbjct: 906  VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 965

Query: 780  LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            L++ PA  P+ ++KNLRVC DCH  IK +SK+  R+I+VRD  RFHHF+ G CSC DYW
Sbjct: 966  LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 179/610 (29%), Positives = 308/610 (50%), Gaps = 12/610 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GC 90
           +FD  P+R    +N+++ E    +L  E   LF+ +    +     T S VL+ C     
Sbjct: 102 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 161

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            FD V   Q+H   +  G      V   L+DLY R   V+  RRVFD +   +  SW ++
Sbjct: 162 AFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 219

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SG ++N+     + LF  M V GI P  + FS+VL        +    Q+H +V+K G 
Sbjct: 220 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 279

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              T VCNAL+S+Y     +  A  +F  M  RD++T+N+++ G        +A E F  
Sbjct: 280 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 339

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L G E   +T  S++  C+    L   +QLH+   K G   ++ I   L+  Y+KC  
Sbjct: 340 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 399

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A   F +  E+++VV W  M+  +     +  +   F QM  E + PN +TY  IL 
Sbjct: 400 IETALDYF-LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 458

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
               +       Q+H+ IIKTN++ +  V + L++ Y K G LD A  +      KD+V+
Sbjct: 459 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 518

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ M+AGY Q    + A+  +RQ+   G++ +E   ++ ++AC A   A+++G+Q HA +
Sbjct: 519 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-AGLQALKEGQQIHAQA 577

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
             +  ++ L   +ALVT+YS+ G IE +   F++    D ++WN+++ G+ Q G+ ++AL
Sbjct: 578 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 637

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            VF  M R+ ++ +  TF   + A +    + +G+Q   ++    +   T E  + ++ +
Sbjct: 638 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET-EVCNALISM 696

Query: 627 YSRAGMLEKA 636
           Y++ G +  A
Sbjct: 697 YAKCGSISDA 706



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 170/561 (30%), Positives = 275/561 (49%), Gaps = 11/561 (1%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L   LKT G L +   GR++H + +K G   +  +S  L D Y+   ++    +VFD+M 
Sbjct: 51  LEGCLKTNGSLDE---GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP 107

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV- 199
           E  + +W  ++   A   +   V  LF RM  E + PN  TFS VL       +    V 
Sbjct: 108 ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE 167

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  ++  G    T VCN LI +Y ++  V  AR VFDG+  +D  +W +M++G   NE
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 227

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   F +M + G   T   F SV+  C   + L +  QLH  VLK G   D  +  
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 287

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y   G +  A  IFS M + +D V++  +I+G  Q G  + A+  F +M  +G+ 
Sbjct: 288 ALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 346

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+  T + ++ A  A        Q+HA+  K  +  +  +  ALLN Y K   ++ A   
Sbjct: 347 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 406

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F   + +++V W+ ML  Y  + D   + +I+RQ+  E + PN++T+ S++  C      
Sbjct: 407 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL-GD 465

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +E G+Q H+  IK        V S L+ MY+K G +++A ++  R   +D+VSW +MI G
Sbjct: 466 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 525

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y Q+    KAL  F++M  + +  D +     ++AC     + EGQQ             
Sbjct: 526 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSS 584

Query: 616 TMEHYSCMVDLYSRAGMLEKA 636
            +   + +V LYSR G +E++
Sbjct: 585 DLPFQNALVTLYSRCGKIEES 605



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 257/541 (47%), Gaps = 22/541 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           + +F    QR+ V YN L+    +    ++A+ LF  +   GL    +TL+S++  C   
Sbjct: 303 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 362

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G LF    G+Q+H    K GFA +  +  +L++LY +  ++E     F +    NVV W 
Sbjct: 363 GTLFR---GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 419

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            +L  Y           +F +MQ+E I PN +T+ ++L      G +    Q+H+ +IK 
Sbjct: 420 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 479

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             ++   VC+ LI MY K   +  A  +      +D ++W +M+AGY       +A  TF
Sbjct: 480 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 539

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G         + +  CA  + L+  +Q+H+Q   +G   D   +  L+  YS+C
Sbjct: 540 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 599

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           GK+E++   F    E  D ++W A++SG  Q+G  + A+  F +M REG+  N FT+   
Sbjct: 600 GKIEESYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 658

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           + A    +      QVHA I KT Y+    V  AL++ Y K G + +A K F  +  K+ 
Sbjct: 659 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 718

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+W+A++  Y++ G    A+  + Q+    V+PN  T   V++AC+     V++G  +  
Sbjct: 719 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI-GLVDKGIAYFE 777

Query: 505 C-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
                  +  K  + +CV    V M ++ G +  A E  +    K D + W +++     
Sbjct: 778 SMNSEYGLSPKPEHYVCV----VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 833

Query: 559 H 559
           H
Sbjct: 834 H 834



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 41/305 (13%)

Query: 377 GVRPNGFTYSIIL-----TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           G+RPN  T   +L     T        ++H+ I+K   + +  +   L + Y+ KG L  
Sbjct: 39  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98

Query: 432 AAKVFELIDEKDIVAWSAM---LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           A KVF+ + E+ I  W+ M   LA    IG+  G   ++ ++ SE V PNE TFS V+ A
Sbjct: 99  AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFG---LFVRMVSENVTPNEGTFSGVLEA 155

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C   S A +  +Q HA  +   L ++  V + L+ +YS+ G ++ A  VF   R +D  S
Sbjct: 156 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 215

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ------ 602
           W +MI G +++    +A+ +F +M    +      F  V++AC     ++ G+Q      
Sbjct: 216 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 275

Query: 603 -----------------YFDI--MVNEHHIYPTMEH-----YSCMVDLYSRAGMLEKAMD 638
                            YF +  +++  HI+  M       Y+ +++  S+ G  EKAM+
Sbjct: 276 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 335

Query: 639 IINRM 643
           +  RM
Sbjct: 336 LFKRM 340


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 288/839 (34%), Positives = 463/839 (55%), Gaps = 36/839 (4%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQ----------------EALNLFLGIRRLGLPLF 77
            L D   +  FV+  R +F+  R   H                 EA+ LF  +  LG+   
Sbjct: 228  LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287

Query: 78   GSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
                SSVL  C  +     G Q+H   +K GF+ D  V  +LV LY    N+     +F 
Sbjct: 288  PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347

Query: 138  DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            +M++ + V++ +L++G ++    ++ +ELF RM ++G++P+S T ++++   + +G +  
Sbjct: 348  NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407

Query: 198  AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
              Q+H    K G      +  AL+++Y K   +  A   F   E  + + WN M+  Y  
Sbjct: 408  GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467

Query: 258  NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
             +    +F  F  M +      + T+ S++K C    +L L  Q+HSQ++K     +  +
Sbjct: 468  LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527

Query: 318  RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
             + L+  Y+K GK++ A  I  +    KDVVSWT MI+G+ Q    D A+  F QM   G
Sbjct: 528  CSVLIDMYAKLGKLDTAWDIL-IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586

Query: 378  VRPN--GFTYSIILTA--QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            +R +  G T ++   A  Q      Q+HA    + +        AL+  Y + G ++E+ 
Sbjct: 587  IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646

Query: 434  KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
              FE  +  D +AW+A+++G+ Q G+ E A++++ ++  EG+  N FTF S + A  + +
Sbjct: 647  LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA-ASET 705

Query: 494  AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            A ++QGKQ HA   K   ++   V +AL++MY+K G+I  A + F     ++ VSWN++I
Sbjct: 706  ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765

Query: 554  CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
              Y++HG   +AL+ F +M   ++  + +T +GV++AC+H GLVD+G  YF+ M +E+ +
Sbjct: 766  NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825

Query: 614  YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC-------------- 659
             P  EHY C+VD+ +RAG+L +A + I  MP    A VWRT+L+AC              
Sbjct: 826  SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885

Query: 660  RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
             L+ L+P DSA YVLLSN+YA +  W  R   R+ M ++ VKKE G SWIEVKN  +SF 
Sbjct: 886  HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945

Query: 720  AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
             GD +HP +++I+   ++L+ R  + GY  D   +L ++  E K+ I+  HSE+LAI+FG
Sbjct: 946  VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 1005

Query: 780  LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            L++ PA  P+ ++KNLRVC DCH  IK +SK+  R+I+VRD  RFHHF+ G CSC DYW
Sbjct: 1006 LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  295 bits (755), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 179/610 (29%), Positives = 308/610 (50%), Gaps = 12/610 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GC 90
           +FD  P+R    +N+++ E    +L  E   LF+ +    +     T S VL+ C     
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            FD V   Q+H   +  G      V   L+DLY R   V+  RRVFD +   +  SW ++
Sbjct: 202 AFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SG ++N+     + LF  M V GI P  + FS+VL        +    Q+H +V+K G 
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              T VCNAL+S+Y     +  A  +F  M  RD++T+N+++ G        +A E F  
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L G E   +T  S++  C+    L   +QLH+   K G   ++ I   L+  Y+KC  
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A   F +  E+++VV W  M+  +     +  +   F QM  E + PN +TY  IL 
Sbjct: 440 IETALDYF-LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
               +       Q+H+ IIKTN++ +  V + L++ Y K G LD A  +      KD+V+
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ M+AGY Q    + A+  +RQ+   G++ +E   ++ ++AC A   A+++G+Q HA +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-AGLQALKEGQQIHAQA 617

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
             +  ++ L   +ALVT+YS+ G IE +   F++    D ++WN+++ G+ Q G+ ++AL
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            VF  M R+ ++ +  TF   + A +    + +G+Q   ++    +   T E  + ++ +
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET-EVCNALISM 736

Query: 627 YSRAGMLEKA 636
           Y++ G +  A
Sbjct: 737 YAKCGSISDA 746



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 170/561 (30%), Positives = 275/561 (49%), Gaps = 11/561 (1%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L   LKT G L +   GR++H + +K G   +  +S  L D Y+   ++    +VFD+M 
Sbjct: 91  LEGCLKTNGSLDE---GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP 147

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV- 199
           E  + +W  ++   A   +   V  LF RM  E + PN  TFS VL       +    V 
Sbjct: 148 ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE 207

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  ++  G    T VCN LI +Y ++  V  AR VFDG+  +D  +W +M++G   NE
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   F +M + G   T   F SV+  C   + L +  QLH  VLK G   D  +  
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y   G +  A  IFS M + +D V++  +I+G  Q G  + A+  F +M  +G+ 
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+  T + ++ A  A        Q+HA+  K  +  +  +  ALLN Y K   ++ A   
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F   + +++V W+ ML  Y  + D   + +I+RQ+  E + PN++T+ S++  C      
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL-GD 505

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +E G+Q H+  IK        V S L+ MY+K G +++A ++  R   +D+VSW +MI G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y Q+    KAL  F++M  + +  D +     ++AC     + EGQQ             
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSS 624

Query: 616 TMEHYSCMVDLYSRAGMLEKA 636
            +   + +V LYSR G +E++
Sbjct: 625 DLPFQNALVTLYSRCGKIEES 645



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 257/541 (47%), Gaps = 22/541 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           + +F    QR+ V YN L+    +    ++A+ LF  +   GL    +TL+S++  C   
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G LF    G+Q+H    K GFA +  +  +L++LY +  ++E     F +    NVV W 
Sbjct: 403 GTLFR---GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            +L  Y           +F +MQ+E I PN +T+ ++L      G +    Q+H+ +IK 
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             ++   VC+ LI MY K   +  A  +      +D ++W +M+AGY       +A  TF
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G         + +  CA  + L+  +Q+H+Q   +G   D   +  L+  YS+C
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           GK+E++   F    E  D ++W A++SG  Q+G  + A+  F +M REG+  N FT+   
Sbjct: 640 GKIEESYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           + A    +      QVHA I KT Y+    V  AL++ Y K G + +A K F  +  K+ 
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+W+A++  Y++ G    A+  + Q+    V+PN  T   V++AC+     V++G  +  
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI-GLVDKGIAYFE 817

Query: 505 C-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
                  +  K  + +CV    V M ++ G +  A E  +    K D + W +++     
Sbjct: 818 SMNSEYGLSPKPEHYVCV----VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 873

Query: 559 H 559
           H
Sbjct: 874 H 874



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 41/305 (13%)

Query: 377 GVRPNGFTYSIIL-----TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           G+RPN  T   +L     T        ++H+ I+K   + +  +   L + Y+ KG L  
Sbjct: 79  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138

Query: 432 AAKVFELIDEKDIVAWSAM---LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           A KVF+ + E+ I  W+ M   LA    IG+  G   ++ ++ SE V PNE TFS V+ A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFG---LFVRMVSENVTPNEGTFSGVLEA 195

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C   S A +  +Q HA  +   L ++  V + L+ +YS+ G ++ A  VF   R +D  S
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ------ 602
           W +MI G +++    +A+ +F +M    +      F  V++AC     ++ G+Q      
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315

Query: 603 -----------------YFDI--MVNEHHIYPTMEH-----YSCMVDLYSRAGMLEKAMD 638
                            YF +  +++  HI+  M       Y+ +++  S+ G  EKAM+
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375

Query: 639 IINRM 643
           +  RM
Sbjct: 376 LFKRM 380



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 12/178 (6%)

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
           + G++PN  T   ++  C   + ++++G++ H+  +K  L++  C+S  L   Y  KG++
Sbjct: 77  NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
             A +VF    +R + +WN MI   A      +   +F  M  +++  +  TF GV+ AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196

Query: 592 THAGLVDEGQQYFDIMVNEHH--IYPTMEHYSC----MVDLYSRAGMLEKAMDIINRM 643
                   G   FD++   H   +Y  +   +     ++DLYSR G ++ A  + + +
Sbjct: 197 RG------GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 291/788 (36%), Positives = 442/788 (56%), Gaps = 23/788 (2%)

Query: 72  LGLPLFGS-TLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR--DVNVSTSLVDLYMRTNN 128
           L LP   S   + +L+ C    D   GR VH   V+ G     D   +  L++LY +   
Sbjct: 40  LALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGP 99

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           +   RR+FD M E N+VS+ +L+ GYA     +    LF R+Q EG + N F  +T+L V
Sbjct: 100 LAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKV 159

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
           L           +H    K G +    V ++LI  Y     V  AR VFDG+  +D++TW
Sbjct: 160 LVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTW 219

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
            +MV+ Y  N++  +A  TF+ M +AGA+       SV+K         L + +H   +K
Sbjct: 220 TAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVK 279

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
              D + ++   L+  Y+KCG +EDA  +F ++    DV+ W+ +IS + Q+   + A  
Sbjct: 280 TLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPH-DDVILWSFLISRYAQSYQNEQAFE 338

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYV 424
            F +M R  V PN F+ S +L A   V+      Q+H  +IK  YE    VG AL++ Y 
Sbjct: 339 MFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYA 398

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           K   ++ + ++F  + + + V+W+ ++ GY Q G  E A+ +++++ +  V   + TFSS
Sbjct: 399 KCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSS 458

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           V+ AC A +A+++   Q H+   K+  NN   V ++L+  Y+K G I  A +VF+   + 
Sbjct: 459 VLRAC-ANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQC 517

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D+VSWN++I GYA HG    ALE+F  M + D + + +TF+ +++ C   GLV++G   F
Sbjct: 518 DVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLF 577

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----- 659
           + M  +H I P+M+HY+C+V L  RAG L  A+  I  +P   S  VWR +L++C     
Sbjct: 578 NSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKN 637

Query: 660 ---------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                    +++ ++P D   YVLLSNMYAA G   + A +RK M +  VKKE G SW+E
Sbjct: 638 VALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVE 697

Query: 711 VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
           +K + ++F  G   HP    I + LE L+ +    GY PD + VL D+D+E K  +L  H
Sbjct: 698 IKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVH 757

Query: 771 SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           SERLA+A+GL  TP G P++I+KNLR C DCHTV K+ISK+ +R+IVVRD NRFHHF EG
Sbjct: 758 SERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEG 817

Query: 831 LCSCGDYW 838
           +CSCGDYW
Sbjct: 818 ICSCGDYW 825



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 256/508 (50%), Gaps = 7/508 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+RN V +  L+  Y      +EA  LF  ++R G  +    L+++LK    +
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAM 163

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                   +H    K G  R+  V +SL+D Y     V   R VFD +   + V+WT+++
Sbjct: 164 DAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMV 223

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y+ N + +  L  F +M++ G KPN F  ++VL              +H   +K   +
Sbjct: 224 SCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCD 283

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  AL+ MY K   + DAR VF+ +   D I W+ +++ Y  +  + +AFE F  M
Sbjct: 284 TEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRM 343

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +       +   V++ CA    L L +Q+H+ V+K G + +  +   LM  Y+KC  M
Sbjct: 344 MRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNM 403

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E++ +IF  +R+  + VSW  +I G+ Q+G  + A++ F +M    V     T+S +L A
Sbjct: 404 ENSLEIFRSLRDANE-VSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRA 462

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
               +      Q+H+ I K+ +     V  +L++ Y K G + +A KVFE I + D+V+W
Sbjct: 463 CANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSW 522

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACS 506
           +A+++GYA  G    A++++ ++     KPN+ TF ++++ C + +  V QG   F++ +
Sbjct: 523 NAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGS-TGLVNQGLSLFNSMT 581

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESA 534
           +  ++  ++   + +V +  + G +  A
Sbjct: 582 MDHRIKPSMDHYTCIVRLLGRAGRLNDA 609



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 172/335 (51%), Gaps = 11/335 (3%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y +  +++F+  P  + + ++ L+  Y +   +++A  +FL + R  +     +LS VL+
Sbjct: 301 YIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQ 360

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  +     G+Q+H   +K G+  ++ V  +L+D+Y +  N+E+   +F  + ++N VS
Sbjct: 361 ACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVS 420

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +++ GY ++   +  L +F  M+   +     TFS+VL   A+   +   VQ+H+++ 
Sbjct: 421 WNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIE 480

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K+     T VCN+LI  Y K   +RDA  VF+ +   D ++WN++++GY  +    +A E
Sbjct: 481 KSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALE 540

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR------TG 320
            FN M  +  +    TFV+++ +C +T    L  Q  S  L N +  DH I+      T 
Sbjct: 541 LFNRMNKSDTKPNDVTFVALLSVCGSTG---LVNQGLS--LFNSMTMDHRIKPSMDHYTC 595

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           ++    + G++ DA K    +      + W A++S
Sbjct: 596 IVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLS 630


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 280/764 (36%), Positives = 446/764 (58%), Gaps = 27/764 (3%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           F + +H   V +G  + + +ST LV+LY    +V   R  FD + + +V +W S++S Y 
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193

Query: 156 RNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            N      +  F+++  V  I+P+ +TF  VL      G +    ++H    K G +   
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNV 250

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  +LI MY +      AR++FD M  RD  +WN+M++G + N    +A +  + M L 
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G ++   T VS++ +C    ++  A  +H  V+K+G++FD  +   L+  Y+K G +EDA
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SIILT 390
            K F  M  + DVVSW ++I+ + QN     A  FF +M   G +P+  T     SI+  
Sbjct: 371 RKAFQQMF-ITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQ 429

Query: 391 AQPAVSPFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           ++   +   VH  I++  +  +   +G A+++ Y K G+LD A KVFE+I  KD+++W+ 
Sbjct: 430 SRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNT 489

Query: 450 MLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           ++ GYAQ G    A+++Y+ +   + + PN+ T+ S++ A  A   A++QG + H   IK
Sbjct: 490 LITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA-YAHVGALQQGMRIHGRVIK 548

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L+  + V++ L+ +Y K G +  A  +F +  +   V+WN++I  +  HGH +K L++
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F EM  + ++ D +TF+ +++AC+H+G V+EG+  F +M  E+ I P+++HY CMVDL  
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLG 667

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG LE A   I  MP    A++W  +L ACR              L  +   +   YVL
Sbjct: 668 RAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 727

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA  G W+   +VR L  +R +KK  G+S IEV  K   F  G+ SHP+  +IY +
Sbjct: 728 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEE 787

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L  L+ ++K  GY PD S+VLQD++++ KE IL+ HSERLAIAFG+++TP  +P++I KN
Sbjct: 788 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCH   K IS++ +R+IVVRD+NRFHHFK+G+CSCGDYW
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 169/542 (31%), Positives = 279/542 (51%), Gaps = 23/542 (4%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG--LPLFGSTLSSVLKTCGCLF 92
           FD+ PQ++   +N ++  Y  +    EA+  F  +  +    P F  T   VLK CG L 
Sbjct: 174 FDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDF-YTFPPVLKACGTLV 232

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   GR++HC   K GF  +V V+ SL+ +Y R       R +FDDM   ++ SW +++S
Sbjct: 233 D---GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMIS 289

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N    + L++   M++EGIK N  T  ++L V    G ++TA+ +H  VIK+G E 
Sbjct: 290 GLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF 349

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V NALI+MY K   + DAR  F  M   D ++WNS++A Y  N+  + A   F  M 
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGKM 331
           L G +    T VS+  + A +++ + +R +H  +++ G +  D  I   ++  Y+K G +
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILT 390
           + A K+F ++  +KDV+SW  +I+G+ QNG    A+  +  M   + + PN  T+  IL 
Sbjct: 470 DSAHKVFEIIL-VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP 528

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   V   Q    +H  +IKTN      V T L++ Y K G L +A  +F  + ++  V 
Sbjct: 529 AYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 588

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ----F 502
           W+A+++ +   G  E  +K++ ++  EGVKP+  TF S+++AC+  S  VE+GK      
Sbjct: 589 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH-SGFVEEGKWCFRLM 647

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
               IK  L +  C    +V +  + G +E A    K    + D   W +++     HG+
Sbjct: 648 QEYGIKPSLKHYGC----MVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGN 703

Query: 562 TK 563
            +
Sbjct: 704 IE 705



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 255/559 (45%), Gaps = 56/559 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +SLFD  P R+   +N ++    ++    +AL++   +R  G+ +   T+ S+L  C  L
Sbjct: 270 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQL 329

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D      +H   +K G   D+ VS +L+++Y +  N+ED R+ F  M  ++VVSW S++
Sbjct: 330 GDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSII 389

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG- 210
           + Y +N         F +MQ+ G +P+  T  ++  ++A       +  VH  +++ G  
Sbjct: 390 AAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWL 449

Query: 211 --EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             +VV  + NA++ MY K  ++  A  VF+ +  +D I+WN+++ GY  N L  EA E +
Sbjct: 450 MEDVV--IGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVY 507

Query: 269 NNMGLAGAEL-TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
             M      +  + T+VS++   A    L+   ++H +V+K  +  D  + T L+  Y K
Sbjct: 508 KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGK 567

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG++ DA  +F  + + +  V+W A+IS H  +G  +  +  F +M  EGV+P+  T+  
Sbjct: 568 CGRLVDAMSLFYQVPQ-ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF-- 624

Query: 388 ILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA- 446
                                         +LL+A    G ++E    F L+ E  I   
Sbjct: 625 -----------------------------VSLLSACSHSGFVEEGKWCFRLMQEYGIKPS 655

Query: 447 ---WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
              +  M+    + G  E A    + +    ++P+   + +++ AC      +E GK F 
Sbjct: 656 LKHYGCMVDLLGRAGYLEMAYGFIKDMP---LQPDASIWGALLGACRI-HGNIELGK-FA 710

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL---VSWNSMICG----- 555
           +  +    +  +     L  +Y+  G  E   +V    R+R L     W+++        
Sbjct: 711 SDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDV 770

Query: 556 -YAQHGHTKKALEVFKEMR 573
            Y  +    K  E+++E+R
Sbjct: 771 FYTGNQSHPKCKEIYEELR 789


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 303/824 (36%), Positives = 452/824 (54%), Gaps = 27/824 (3%)

Query: 37  RSPQRNFVEYNRLLFEYCRDSLHQEALN-LFLGIRRLGLPLFGS-TLSSVLKTCGCLFDH 94
           RS    F + N LL    R+    EAL  L   +  L LP   S   +  L+ C    D 
Sbjct: 5   RSLLPTFSQINGLL---SRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDA 61

Query: 95  VFGRQVHCECVKSGFAR--DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
             GR VH   V+ G     D   +  L++ Y +   +   RR+FD M E N VS+ +L+ 
Sbjct: 62  RAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQ 121

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GYA     +  LELF R+Q EG + N F  +T+L VL        A  +H    K G + 
Sbjct: 122 GYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDR 181

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  ALI  Y     V  AR VFDG+  +D++TW +MV+ Y  N++   A  TF+ M 
Sbjct: 182 NAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMR 241

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           + G +       S +K         L + +H   +K   D + ++   L+  Y+KCG +E
Sbjct: 242 MTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIE 301

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA  IF M+    DV+ W+ +IS + Q+   + A   F +M R  V PN F+ S +L A 
Sbjct: 302 DAHAIFEMIPH-DDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQAC 360

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             ++      Q+H   IK  YE    VG AL++ Y K   ++ + ++F  + + + V+W+
Sbjct: 361 ANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWN 420

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            ++ GY Q G  E A+ ++ ++ +  +   + TFSSV+ AC A +++++   Q H+   K
Sbjct: 421 TIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRAC-ANTSSIKHAVQIHSLIEK 479

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           +  NN   V ++L+  Y+K G I  A +VF+   + D+VSWNS+I  YA HG    ALE+
Sbjct: 480 STFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALEL 539

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F  M + D++ + +TF+ +++ C   GLV++G   F+ M+ +H I P+MEHY+C+V L  
Sbjct: 540 FDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLG 599

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVL 674
           RAG L  A+  I  +P   S  VWR +L++C              +++ ++PHD   YVL
Sbjct: 600 RAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVL 659

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSNMYAA G   E A  RK M +  VKKEAG SW+E+K + ++F  G   HP    I + 
Sbjct: 660 LSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAM 719

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           LE L+ +    GY PD + VL D+D+E K  +L  HSERLA+A+GL  TP G P++I+KN
Sbjct: 720 LEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKN 779

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR C DCHT+ K+ISK+ +R+I+VRD NRFHHF+EG+CSCGDYW
Sbjct: 780 LRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/586 (26%), Positives = 283/586 (48%), Gaps = 16/586 (2%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY+K       + LFD  P+RN V +  L+  Y      +EAL LF  ++R G  +    
Sbjct: 91  FYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFV 150

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L+++LK    +        +H    K G  R+  V T+L+D Y     V   R VFD + 
Sbjct: 151 LTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIV 210

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + V+WT+++S Y+ N + +  L  F +M++ G KPN F  ++ L              
Sbjct: 211 GKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKG 270

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H   +K   +    V  AL+ MY K   + DA A+F+ +   D I W+ +++ Y  +  
Sbjct: 271 IHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQ 330

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           + +AFE F  M  +       +   V++ CA    L L  Q+H+  +K G + +  +   
Sbjct: 331 NEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNA 390

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           LM  Y+KC  ME++ +IFS +++  + VSW  +I G+ Q+G  + A++ F +M    +  
Sbjct: 391 LMDMYAKCRNMENSLEIFSSLQDANE-VSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLS 449

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
              T+S +L A    S      Q+H+ I K+ +     V  +L++ Y K G + +A KVF
Sbjct: 450 TQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVF 509

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           E I E D+V+W+++++ YA  G    A++++ ++    +K N+ TF S+++ C   +  V
Sbjct: 510 ESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVC-GSTGLV 568

Query: 497 EQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMIC 554
            QG   F++  +  ++  ++   + +V +  + G +  A + +         + W +++ 
Sbjct: 569 NQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLS 628

Query: 555 GYAQHGHTKKALEVFKEMRRQDLE-FDGITFIGVITACTHAGLVDE 599
               H +   AL  +   +  D+E  D  T++ +      AG++DE
Sbjct: 629 SCVVHKNV--ALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDE 672


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 259/628 (41%), Positives = 406/628 (64%), Gaps = 24/628 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  VFD M +R+ +TW  M+  +       +A + F +M L+G    R T+ SV+  C  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVS 349
              L L +QLHS+V++ G+  D  +   L+  Y+KC   G ++D+ K+F  M E  +V+S
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMS 122

Query: 350 WTAMISGHLQNGAIDL-AVNFFCQMTREGVRPNGFTYSIILTAQPAVS-PF---QVHAHI 404
           WTA+I+ + Q+G  D  A+  FC+M    +RPN F++S +L A   +S P+   QV+++ 
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K        VG +L++ Y + G +++A K F+++ EK++V+++A++ GYA+   +E A 
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++ ++   G+  + FTF+S+++   A   A+ +G+Q H   +K    +  C+ +AL++M
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSG-AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           YS+ GNIE+A +VF     R+++SW SMI G+A+HG   +ALE+F +M     + + IT+
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + V++AC+H G++ EGQ++F+ M  EH I P MEHY+CMVDL  R+G+L +AM+ IN MP
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421

Query: 645 FAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERAR 690
             A A VWRT+L ACR              ++  +P D A Y+LLSN++A+ G W++  +
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 481

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           +RK M +R + KEAG SWIEV+N+ + F  G+ SHPQ+ QIY +L++L++++K+ GY PD
Sbjct: 482 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 541

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
           T +VL DI++E KE  L QHSE++A+AFGL++T    P++I KNLRVCGDCHT IK IS 
Sbjct: 542 TDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISM 601

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              R+IVVRD+NRFHH K G+CSC DYW
Sbjct: 602 ATGREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 234/441 (53%), Gaps = 17/441 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+ P+RN V +  ++  + +    ++A++LFL +   G      T SSVL  C  L  
Sbjct: 7   VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT---NNVEDGRRVFDDMNESNVVSWTSL 150
              G+Q+H   ++ G A DV V  SLVD+Y +     +V+D R+VF+ M E NV+SWT++
Sbjct: 67  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126

Query: 151 LSGYARNKMNDR-VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ YA++   D+  +ELF +M    I+PN F+FS+VL    +     T  QV++  +K G
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
              V  V N+LISMY +S  + DAR  FD + +++ +++N++V GY  N    EAF  FN
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G  ++  TF S++   A+   +    Q+H ++LK G   +  I   L+  YS+CG
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A ++F+ M E ++V+SWT+MI+G  ++G    A+  F +M   G +PN  TY  +L
Sbjct: 307 NIEAAFQVFNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVG-----TALLNAYVKKGILDEAAKVFELIDE--- 441
           +A   V           + Y++   V        +++   + G+L EA    E I+    
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA---MEFINSMPL 422

Query: 442 -KDIVAWSAMLAGYAQIGDTE 461
             D + W  +L      G+TE
Sbjct: 423 MADALVWRTLLGACRVHGNTE 443



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 240/459 (52%), Gaps = 21/459 (4%)

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           +VFD M E N+V+WT +++ +A+       ++LF  M++ G  P+ FT+S+VL    + G
Sbjct: 6   KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM---VRDARAVFDGMEDRDSITWNS 250
           ++A   Q+H+ VI+ G  +   V  +L+ MY K      V D+R VF+ M + + ++W +
Sbjct: 66  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125

Query: 251 MVAGYV-TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           ++  Y  + E   EA E F  M          +F SV+K C    +     Q++S  +K 
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           GI   + +   L+  Y++ G+MEDA K F ++ E K++VS+ A++ G+ +N   + A   
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFE-KNLVSYNAIVDGYAKNLKSEEAFLL 244

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F ++   G+  + FT++ +L+   ++       Q+H  ++K  Y+ +  +  AL++ Y +
Sbjct: 245 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 304

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G ++ A +VF  ++++++++W++M+ G+A+ G    A++++ ++   G KPNE T+ +V
Sbjct: 305 CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAV 364

Query: 486 INACTAPSAAVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           ++AC+      E  K F++      I  ++ +  C    +V +  + G +  A E     
Sbjct: 365 LSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYAC----MVDLLGRSGLLVEAMEFINSM 420

Query: 542 R-KRDLVSWNSMICGYAQHGHT---KKALEVFKEMRRQD 576
               D + W +++     HG+T   + A E+  E    D
Sbjct: 421 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDD 459



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 170/337 (50%), Gaps = 2/337 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDS-LHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +F++ P+ N + +  ++  Y +     +EA+ LF  +    +     + SSVLK CG 
Sbjct: 109 RKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 168

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G QV+   VK G A    V  SL+ +Y R+  +ED R+ FD + E N+VS+ ++
Sbjct: 169 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 228

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GYA+N  ++    LF+ +   GI  ++FTF+++L   A  G +    Q+H  ++K G 
Sbjct: 229 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 288

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    +CNALISMY +   +  A  VF+ MEDR+ I+W SM+ G+  +     A E F+ 
Sbjct: 289 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 348

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           M   G +    T+V+V+  C+    +    +  +S   ++GI         ++    + G
Sbjct: 349 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 408

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            + +A +  + M  M D + W  ++     +G  +L 
Sbjct: 409 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 445


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 282/728 (38%), Positives = 422/728 (57%), Gaps = 20/728 (2%)

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           +E   R+F  M E N VSW +LL+GYA+     +VL+LF +M+    K + FT STVL  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
            A+ G +     +H + +++G E+   +  +L+ MY K   V DA  VF  + + D + W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
           ++M+ G        EA E F+ M   GA   + T  S++       +LR  + +H  + K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
            G + D+ +   L++ Y K   +ED +K+F  M    D+VSW A++SG   +        
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTN-PDLVSWNALLSGFYDSQTCGRGPR 239

Query: 369 FFCQMTREGVRPNGFTY-SIILTAQPAVSP---FQVHAHIIKTNYEKSFSVGTALLNAYV 424
            F QM  EG +PN FT+ S++ +    + P    QVHAHIIK + +    VGTAL++ Y 
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           K   L++A   F+ +  +DI +W+ +++GYAQ    E AVK +RQ+  EG+KPNE+T +S
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
            ++ C+   A +E G+Q HA ++KA     + V SALV +Y K G +E A  +FK    R
Sbjct: 360 CLSGCSH-MATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISR 418

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D+VSWN++I GY+QHG  +KALE F+ M  + +  D  TFIGV++AC+  GLV+EG++ F
Sbjct: 419 DIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRF 478

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--- 661
           D M   + I P++EHY+CMVD+  RAG   +    I  M     + +W TVL AC+L   
Sbjct: 479 DSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGN 538

Query: 662 -----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                        ++P   + Y+LLSN++A+ G W +   +R LM  R +KKE G SW+E
Sbjct: 539 VDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVE 598

Query: 711 VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
           V  + + FL+ D SHP+  +IY+KL++L   L   GY P T  VL ++ ++ K   L  H
Sbjct: 599 VDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYH 658

Query: 771 SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           SERLA++F L++T A  P++I KNLR+C DCH  +KLIS +  ++IVVRD  RFHHFK G
Sbjct: 659 SERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRG 718

Query: 831 LCSCGDYW 838
            CSC D W
Sbjct: 719 TCSCQDRW 726



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/502 (30%), Positives = 270/502 (53%), Gaps = 5/502 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF   P++N V +N LL  Y +    ++ L LF  ++         TLS+VLK C   
Sbjct: 5   ERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANT 64

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ +H   ++SG   D  +  SLVD+Y +   V D  +VF  +   +VV+W++++
Sbjct: 65  GSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMI 124

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G  +        ELFH M+ +G +PN FT S+++    + G +     +H  + K G E
Sbjct: 125 TGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFE 184

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N LI MY+KS+ V D   VF+ M + D ++WN++++G+  ++        F  M
Sbjct: 185 SDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQM 244

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L G +    TF+SV++ C++  +    +Q+H+ ++KN  D D  + T L+  Y+K   +
Sbjct: 245 LLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCL 304

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           EDA   F  +   +D+ SWT +ISG+ Q    + AV +F QM REG++PN +T +  L+ 
Sbjct: 305 EDAGVAFDRLVN-RDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              ++      Q+HA  +K  +     VG+AL++ Y K G ++ A  +F+ +  +DIV+W
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + +++GY+Q G  E A++ +R + SEG+ P+E TF  V++AC+      E  K+F + S 
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483

Query: 508 KAKLNNALCVSSALVTMYSKKG 529
              +N ++   + +V +  + G
Sbjct: 484 IYGINPSIEHYACMVDILGRAG 505


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 301/829 (36%), Positives = 460/829 (55%), Gaps = 28/829 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR----LGLPLFGSTLSSVLKTCG 89
           LFD  P R    +N L+          EA+ ++  +R      G    G TL+SVLK CG
Sbjct: 115 LFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACG 174

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVVSWT 148
              D   G +VH   VKSG  R   V+ +LV +Y +   ++   RVF+ M +  +V SW 
Sbjct: 175 AEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWN 234

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S +SG  +N M    L+LF RMQ +G   NS+T   VL V A+   +    ++H  ++K 
Sbjct: 235 SAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKC 294

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G E     CNAL+ MY +   V  A  VF  + D+D I+WNSM++ YV N L+ EA + F
Sbjct: 295 GTEFNIQ-CNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFF 353

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G     +  VS++        L   R++H+  +K  +D D  I   LM  Y KC
Sbjct: 354 GEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKC 413

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
             +E ++++F  MR +KD VSWT +I+ + Q+     A+  F    +EG++ +      I
Sbjct: 414 YSVECSARVFDRMR-IKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSI 472

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A   +       QVH++ I+ N      +   +++ Y + G +  A  +FE++D+KDI
Sbjct: 473 LEACSGLKSISLLKQVHSYAIR-NGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDI 531

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V W++M+  +A+ G    AV ++ ++ + G++P+      ++ A  A  +++ +GK+ H 
Sbjct: 532 VTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGA-IAGLSSLTKGKEIHG 590

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             I+ K      V S+LV MYS  G++  A +VF   + +D+V W +MI     HGH K+
Sbjct: 591 FLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQ 650

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           A+ +FK M    +  D ++F+ ++ AC+H+ LVDEG+ Y D+MV+++ + P  EHY+C+V
Sbjct: 651 AIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVV 710

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           DL  R+G  E+A   I  MP    + VW  +L ACR              L+ L+P +  
Sbjct: 711 DLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPG 770

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YVL+SN++A  G W     +R  M ++ ++K+   SWIE+ N  ++F A D SH  S  
Sbjct: 771 NYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQA 830

Query: 731 IYSKLEELSTRLKDAG-YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
           I+ KL E++ +L+  G Y  DTS+VL D+ +E K  +L +HSERLAI+FGL++T +G PL
Sbjct: 831 IHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPL 890

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +I KNLRVCGDCH   KL+SKL  R+IVVRD NRFHHF  G CSCGD+W
Sbjct: 891 RIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 292/559 (52%), Gaps = 21/559 (3%)

Query: 97  GRQVHCECVKSGFARDVN---VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           GRQ+H   V +G   D +   ++T L+ +Y +   + D  R+FD M    V SW +L+  
Sbjct: 74  GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133

Query: 154 YARNKMNDRVLELFHRMQ----VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
              +      + ++  M+    V G  P+  T ++VL     EG      +VH + +K+G
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETF 268
            +  T V NAL+ MY K  ++  A  VF+ M D RD  +WNS ++G V N + +EA + F
Sbjct: 194 LDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLF 253

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-TGLMVAYSK 327
             M   G  +   T V V+++CA   +L   R+LH+ +LK G +F  NI+   L+V Y++
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEF--NIQCNALLVMYAR 311

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG ++ A ++F  + + KD +SW +M+S ++QN     A++FF +M + G  P+      
Sbjct: 312 CGWVDSALRVFREIGD-KDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVS 370

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+A   +       +VHA+ +K   +    +   L++ Y+K   ++ +A+VF+ +  KD
Sbjct: 371 LLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKD 430

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            V+W+ ++A YAQ      A+  +R    EG+K +     S++ AC+    ++   KQ H
Sbjct: 431 HVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLK-SISLLKQVH 489

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           + +I+  L + L + + ++ +Y + G +  A  +F+   K+D+V+W SM+  +A++G   
Sbjct: 490 SYAIRNGLLD-LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLH 548

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH-YSC 622
           +A+ +F +M    ++ D +  +G++ A      + +G++    ++     +P      S 
Sbjct: 549 EAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGK--FPVEGAVVSS 606

Query: 623 MVDLYSRAGMLEKAMDIIN 641
           +VD+YS  G +  A+ + +
Sbjct: 607 LVDMYSGCGSMNYALKVFD 625



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 237/478 (49%), Gaps = 15/478 (3%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG---EVVTSVCNALISMYLKSKMVRDA 233
           P +  +  VL ++A    V+   Q+H   +  G    +    +   L+ MY K   + DA
Sbjct: 53  PPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDA 112

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM----GLAGAELTRSTFVSVIKL 289
             +FDGM  R   +WN+++   +++    EA   +  M     +AGA     T  SV+K 
Sbjct: 113 HRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKA 172

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C    + R   ++H   +K+G+D    +   L+  Y+KCG ++ A ++F  MR+ +DV S
Sbjct: 173 CGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVAS 232

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           W + ISG +QNG    A++ F +M  +G   N +T   +L     ++      ++HA ++
Sbjct: 233 WNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALL 292

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K   E +     ALL  Y + G +D A +VF  I +KD ++W++ML+ Y Q      A+ 
Sbjct: 293 KCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAID 351

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
            + ++   G  P+     S+++A       +  G++ HA ++K +L++ L +++ L+ MY
Sbjct: 352 FFGEMVQNGFNPDHACIVSLLSA-VGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMY 410

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
            K  ++E ++ VF R R +D VSW ++I  YAQ     +A+  F+  +++ ++ D +   
Sbjct: 411 IKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMG 470

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            ++ AC+    +   +Q     +    +   +++   ++D+Y   G +  A++I   +
Sbjct: 471 SILEACSGLKSISLLKQVHSYAIRNGLLDLILKNR--IIDIYGECGEVCYALNIFEML 526



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 8/209 (3%)

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL---NNA 514
           GD   A++     ++ G  P        +    A   AV +G+Q HA ++       ++A
Sbjct: 33  GDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDA 92

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             +++ L+ MY K G +  A  +F     R + SWN++I      G   +A+ V++ MR 
Sbjct: 93  GFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRA 152

Query: 575 QD----LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            +       DG T   V+ AC   G    G +   + V       T+   + +V +Y++ 
Sbjct: 153 SEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLV-ANALVGMYAKC 211

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G+L+ A+ +   M        W + ++ C
Sbjct: 212 GLLDSALRVFEWMRDGRDVASWNSAISGC 240



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++F+   +++ V +  ++  +  + L  EA+ LF  +   G+      L  +L     L 
Sbjct: 521 NIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLS 580

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+++H   ++  F  +  V +SLVD+Y    ++    +VFD+    +VV WT++++
Sbjct: 581 SLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMIN 640

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-----GVLADEG 193
               +    + + +F RM   G+ P+  +F  +L       L DEG
Sbjct: 641 ATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEG 686


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  534 bits (1375), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 311/839 (37%), Positives = 481/839 (57%), Gaps = 39/839 (4%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLF----GSTLSSVLKTCG 89
            +FD    RN V +N ++  YCR      A  LF  ++  G+ L       TL S++    
Sbjct: 301  VFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAAC 360

Query: 90   CLFD--HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             L D   V   Q+     KSGF RD+ V ++LV+ + R   ++  + +F  M + N V+ 
Sbjct: 361  SLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTM 420

Query: 148  TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD-----EGIVATAVQVH 202
              L+ G AR    +   ++F  M+ + ++ NS +   +L    +     EG      +VH
Sbjct: 421  NGLMVGLARQHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEFSNLKEG-KRKGQEVH 478

Query: 203  TMVIKNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
              + ++G  +   S+ NAL++MY K   + +A +VF  M  +D+++WNSM++G   NE  
Sbjct: 479  AYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERF 538

Query: 262  MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
             EA   F+ M   G   +  + +S +  C++   L L RQ+H +  K G+D D ++   L
Sbjct: 539  EEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNAL 598

Query: 322  MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNFFCQMTREGVRP 380
            +  Y++   + +  K+F  M E  D VSW + I    +  A  L A+ +F +M + G RP
Sbjct: 599  LTLYAETDSINECQKVFFQMPEY-DQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRP 657

Query: 381  NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
            N  T+  IL A  + S      Q+HA I+K +     ++  ALL  Y K   +++   +F
Sbjct: 658  NRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIF 717

Query: 437  ELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
              + E+ D V+W++M++GY   G    A+ +   +   G K + FTF++V++AC A  A 
Sbjct: 718  SRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSAC-ASVAT 776

Query: 496  VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            +E+G + HAC+++A L + + V SALV MY+K G I+ AS  F+    R++ SWNSMI G
Sbjct: 777  LERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISG 836

Query: 556  YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            YA+HGH +KAL++F  M++     D +TF+GV++AC+H GLVDEG ++F  M   + + P
Sbjct: 837  YARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSP 896

Query: 616  TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC---------------- 659
             +EH+SCMVDL  RAG ++K  D I  MP   +  +WRTVL AC                
Sbjct: 897  RIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAK 956

Query: 660  RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
             LI L+P ++  YVLLSNM+AA G+W++    R  M    VKK+AG SW+ +K+  + F+
Sbjct: 957  MLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFV 1016

Query: 720  AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
            AGD +HP+  +IY KL+EL  +++DAGY P+T Y L D++ E+KE +LS HSE+LAIAF 
Sbjct: 1017 AGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAF- 1075

Query: 780  LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ++   +  P++I+KNLRVCGDCHT  K ISK+  R I++RD+NRFHHF  G+CSCGDYW
Sbjct: 1076 VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 181/641 (28%), Positives = 315/641 (49%), Gaps = 40/641 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC-GC 90
           + LFD  PQ+N V ++ L+  Y ++ +  EA +LF G+   GL      + S L+ C  C
Sbjct: 195 RKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQC 254

Query: 91  LFDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMR-TNNVEDGRRVFDDMNESNVVSWT 148
               +  G Q+H    K     D+ +S  L+ +Y   + +++D  RVFD++   N V+W 
Sbjct: 255 GSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWN 314

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGI----KPNSFTFSTVLGV---LADEGIVATAVQV 201
           S++S Y R        +LF  MQ+EG+    +PN +T  +++     LAD G+V    Q+
Sbjct: 315 SIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLE-QM 373

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
            T + K+G      V +AL++ + +  ++  A+ +F  M DR+++T N ++ G       
Sbjct: 374 LTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQG 433

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL-------RLARQLHSQVLKNG-IDF 313
            EA + F  M     +L      S++ L +T  E        R  +++H+ + ++G +D 
Sbjct: 434 EEAAKVFKEM----KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDA 489

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
             +I   L+  Y KC  +++A  +F +M   KD VSW +MISG   N   + AV+ F  M
Sbjct: 490 RISIGNALVNMYGKCTAIDNACSVFQLMPS-KDTVSWNSMISGLDHNERFEEAVSCFHTM 548

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
            R G+ P+ F+    L++  ++       Q+H    K   +   SV  ALL  Y +   +
Sbjct: 549 KRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSI 608

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQI-GDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           +E  KVF  + E D V+W++ +   A+       A+K + ++   G +PN  TF +++ A
Sbjct: 609 NECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAA 668

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLV 547
            ++ S  +  G Q HA  +K  + +   + +AL+  Y K   +E    +F R   +RD V
Sbjct: 669 VSSFS-VLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEV 727

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SWNSMI GY   G   KA+++   M ++  + DG TF  V++AC     ++ G +     
Sbjct: 728 SWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGME----- 782

Query: 608 VNEHHIYPTMEH----YSCMVDLYSRAGMLEKAMDIINRMP 644
           V+   +   +E      S +VD+Y++ G ++ A      MP
Sbjct: 783 VHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMP 823



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 192/733 (26%), Positives = 340/733 (46%), Gaps = 90/733 (12%)

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           KT   L+D      +H +  K+GF  DV    +L+++Y+R  N+   R++FD+M + N+V
Sbjct: 151 KTSSSLYD---ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLV 207

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI--VATAVQVHT 203
           SW+ L+SGY +N+M D    LF  +   G+ PN F   + L      G   +   +Q+H 
Sbjct: 208 SWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHA 267

Query: 204 MVIKNGGEVVTSVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
            + K        + N L+SMY   S  + DA  VFD ++ R+S+TWNS+++ Y      +
Sbjct: 268 FICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAV 327

Query: 263 EAFETFNNMGLAGAEL----TRSTFVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDHN 316
            AF+ F+ M + G EL       T  S++    +  +  L L  Q+ +++ K+G   D  
Sbjct: 328 SAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLY 387

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           + + L+  +++ G M+ A  IF  M + ++ V+   ++ G  +    + A   F +M ++
Sbjct: 388 VGSALVNGFARYGLMDCAKMIFKQMYD-RNAVTMNGLMVGLARQHQGEEAAKVFKEM-KD 445

Query: 377 GVRPNGFTYSIILTAQPAVSPF--------QVHAHIIKTNY-EKSFSVGTALLNAYVKKG 427
            V  N  +  ++L+     S          +VHA++ ++   +   S+G AL+N Y K  
Sbjct: 446 LVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCT 505

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +D A  VF+L+  KD V+W++M++G       E AV  +  +   G+ P+ F+  S ++
Sbjct: 506 AIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLS 565

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           +C++    +  G+Q H    K  L+  + VS+AL+T+Y++  +I    +VF +  + D V
Sbjct: 566 SCSSL-GWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQV 624

Query: 548 SWNSMICGYAQH-GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           SWNS I   A++     +AL+ F EM +     + +TFI ++ A +   ++  G Q   +
Sbjct: 625 SWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHAL 684

Query: 607 -------------------------MVNEHHIYPTMEH------YSCMVDLYSRAGMLEK 635
                                    M +   I+  M        ++ M+  Y  +G+L K
Sbjct: 685 ILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHK 744

Query: 636 AMDIINRMPFAAS---ATVWRTVLAACRLIS-----LQPHDSAIYVLLS----------N 677
           AMD++  M           + TVL+AC  ++     ++ H  A+   L           +
Sbjct: 745 AMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVD 804

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           MYA  G     +R  +LM  R +     YSW        S ++G   H        K  +
Sbjct: 805 MYAKCGKIDYASRFFELMPVRNI-----YSW-------NSMISGYARHGHGQ----KALK 848

Query: 738 LSTRLKDAGYKPD 750
           + TR+K  G  PD
Sbjct: 849 IFTRMKQHGQSPD 861



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 268/561 (47%), Gaps = 58/561 (10%)

Query: 33   SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
            S+F   P ++ V +N ++     +   +EA++ F  ++R G+     ++ S L +C  L 
Sbjct: 512  SVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 571

Query: 93   DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
                GRQ+H E  K G   DV+VS +L+ LY  T+++ + ++VF  M E + VSW S + 
Sbjct: 572  WLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIG 631

Query: 153  GYARNKMND-RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
              A+ + +  + L+ F  M   G +PN  TF  +L  ++   ++    Q+H +++K    
Sbjct: 632  ALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVA 691

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYVTNELHMEAFETFNN 270
               ++ NAL++ Y K + + D   +F  M E RD ++WNSM++GY+ + +  +A +    
Sbjct: 692  DDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWP 751

Query: 271  MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
            M   G +L   TF +V+  CA+   L    ++H+  ++  ++ D  + + L+  Y+KCGK
Sbjct: 752  MMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGK 811

Query: 331  MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            ++ AS+ F +M  ++++ SW +MISG+ ++G    A+  F +M + G  P+  T+  +L+
Sbjct: 812  IDYASRFFELM-PVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLS 870

Query: 391  AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE-----KDIV 445
            A   V                               G++DE  K F+ + E       I 
Sbjct: 871  ACSHV-------------------------------GLVDEGYKHFKSMGEVYGLSPRIE 899

Query: 446  AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-APSAAVEQGKQFHA 504
             +S M+    + GD +   KI   + +  + PN   + +V+ AC  A     E G++   
Sbjct: 900  HFSCMVDLLGRAGDVK---KIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAK 956

Query: 505  CSIKAKLNNALCVSSALVT-MYSKKGNIESASEVFKRQRKRDL-----VSWNSM------ 552
              I+ +  NA  V+  L++ M++  GN E   E     RK  +      SW +M      
Sbjct: 957  MLIELEPQNA--VNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHL 1014

Query: 553  -ICGYAQHGHTKKALEVFKEM 572
             + G   H   +K  E  KE+
Sbjct: 1015 FVAGDQTHPEKEKIYEKLKEL 1035


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  534 bits (1375), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 291/826 (35%), Positives = 461/826 (55%), Gaps = 28/826 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F    + N V +  L+  Y  +   +E ++++  +RR G+    + +++V+++CG L D
Sbjct: 116 VFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVD 175

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G QV    +KSG    V+V+ SL+ ++   +++E+   VFDDM E + +SW S+++ 
Sbjct: 176 KMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITA 235

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              N   ++ LE F +M+    K +  T S +L V      +     +H MV+K+G E  
Sbjct: 236 SVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESN 295

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             VCN+L+SMY ++    DA  VF  M +RD I+WNSM+A +V N  +  A E    M  
Sbjct: 296 VCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQ 355

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   TF + +  C   + L++   +H+ V+  G+  +  I   L+  Y K G M  
Sbjct: 356 TRKATNYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAA 412

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++  +M + +D V+W A+I GH  N   + A+  F  +  EGV  N  T   +L+A  
Sbjct: 413 AQRVCKIMPD-RDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA-- 469

Query: 394 AVSP-------FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
            +SP         +HAHI+   +E    V ++L+  Y + G L+ +  +F+++  K+   
Sbjct: 470 FLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSST 529

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+A+L+  A  G  E A+K+  ++ ++G+  ++F+FS V +A       +++G+Q H+  
Sbjct: 530 WNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFS-VAHAIIGNLTLLDEGQQLHSLI 588

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           IK    +   V +A + MY K G I+    +  + R R   SWN +I   A+HG  ++A 
Sbjct: 589 IKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAR 648

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           E F EM    L  D +TF+ +++AC+H GLVDEG  YF  M  +  +   +EH  C++DL
Sbjct: 649 EAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDL 708

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
             RAG L +A + IN+MP   +  VWR++LAAC              RL  L   D + Y
Sbjct: 709 LGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAY 768

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VL SN+ A+T  W++   VRK M    +KK+   SW+++KN+  +F  GD  HPQ+ +IY
Sbjct: 769 VLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIY 828

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           +KLEEL   +++AGY PDTSY LQD D+E KE  L  HSER+A+AFGL+ +  G+PL+I 
Sbjct: 829 AKLEELKKIIREAGYMPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIF 888

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLRVCGDCH+V K++S++  R I++RD  RFHHF  G CSC DYW
Sbjct: 889 KNLRVCGDCHSVFKMVSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 185/635 (29%), Positives = 337/635 (53%), Gaps = 17/635 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           Q +FD+ P+RN   +N L+  + R   +Q+A+  F  +   G+       +S++  C   
Sbjct: 12  QHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRS 71

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           GC+ +  F  QVH   +K G A DV V TSL+  Y     V +   VF ++ E N+VSWT
Sbjct: 72  GCMTEGAF--QVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWT 129

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMV 205
           SL+ GYA N     V+ ++ R++ +G+  N    +TV+   GVL D+ +     QV   V
Sbjct: 130 SLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKML---GYQVLGSV 186

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           IK+G +   SV N+LISM+     + +A  VFD M++RD+I+WNS++   V N    ++ 
Sbjct: 187 IKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSL 246

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E F+ M    A+    T  +++ +C + + LR  R LH  V+K+G++ +  +   L+  Y
Sbjct: 247 EYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMY 306

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           S+ GK EDA  +F  MRE +D++SW +M++ H+ NG    A+    +M +     N  T+
Sbjct: 307 SQAGKSEDAEFVFHKMRE-RDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTF 365

Query: 386 SIILTAQPAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           +  L+A   +   + VHA +I      +  +G AL+  Y K G +  A +V +++ ++D 
Sbjct: 366 TTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDE 425

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V W+A++ G+A   +   A++ +  L  EGV  N  T  ++++A  +P   ++ G   HA
Sbjct: 426 VTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHA 485

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             + A       V S+L+TMY++ G++ +++ +F     ++  +WN+++   A +G  ++
Sbjct: 486 HIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEE 545

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH-YSCM 623
           AL++  +MR   +  D  +F        +  L+DEGQQ   +++   H + + ++  +  
Sbjct: 546 ALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIK--HGFESNDYVLNAT 603

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +D+Y + G ++    I+ + P + S   W  +++A
Sbjct: 604 MDMYGKCGEIDDVFRILPQ-PRSRSQRSWNILISA 637



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 275/544 (50%), Gaps = 15/544 (2%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +  ++E  + VFD M E N  SW +L+SG+ R     + ++ F  M   G++P+S+ 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 182 FSTVLGVLADEG-IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            ++++      G +   A QVH  VIK G      V  +L+  Y     V +   VF  +
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
           E+ + ++W S++ GY  N    E    +  +   G     +   +VI+ C    +  L  
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           Q+   V+K+G+D   ++   L+  +  C  +E+AS +F  M+E +D +SW ++I+  + N
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKE-RDTISWNSIITASVHN 239

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQPAVSPFQVHAHIIKTNYEKSFSVG 416
           G  + ++ +F QM     + +  T S +L    +AQ       +H  ++K+  E +  V 
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
            +LL+ Y + G  ++A  VF  + E+D+++W++M+A +   G+   A+++  ++      
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
            N  TF++ ++AC      +E  K  HA  I   L++ L + +ALVTMY K G++ +A  
Sbjct: 360 TNYVTFTTALSACY----NLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA-CTHAG 595
           V K    RD V+WN++I G+A +     A+E F  +R + +  + IT + +++A  +   
Sbjct: 416 VCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDD 475

Query: 596 LVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           L+D G   +  I+V    +   ++  S ++ +Y++ G L  +  I + +    S+T W  
Sbjct: 476 LLDHGMPIHAHIVVAGFELETFVQ--SSLITMYAQCGDLNTSNYIFDVLANKNSST-WNA 532

Query: 655 VLAA 658
           +L+A
Sbjct: 533 ILSA 536


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/628 (41%), Positives = 406/628 (64%), Gaps = 24/628 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  VFD M +R+ +TW  M+  +       +A + F +M L+G    R T+ SV+  C  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVS 349
              L L +QLHS+V++ G+  D  +   L+  Y+KC   G ++D+ K+F  M E  +V+S
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMS 127

Query: 350 WTAMISGHLQNGAIDL-AVNFFCQMTREGVRPNGFTYSIILTAQPAVS-PF---QVHAHI 404
           WTA+I+ + Q+G  D  A+  FC+M    +RPN F++S +L A   +S P+   QV+++ 
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K        VG +L++ Y + G +++A K F+++ EK++V+++A++ GYA+   +E A 
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++ ++   G+  + FTF+S+++   A   A+ +G+Q H   +K    +  C+ +AL++M
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSG-AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           YS+ GNIE+A +VF     R+++SW SMI G+A+HG   +ALE+F +M     + + IT+
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + V++AC+H G++ EGQ++F+ M  EH I P MEHY+CMVDL  R+G+L +AM+ IN MP
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426

Query: 645 FAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERAR 690
             A A VWRT+L ACR              ++  +P D A Y+LLSN++A+ G W++  +
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 486

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           +RK M +R + KEAG SWIEV+N+ + F  G+ SHPQ+ QIY +L++L++++K+ GY PD
Sbjct: 487 IRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPD 546

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
           T +VL DI++E KE  L QHSE++A+AFGL++T    P++I KNLRVCGDCHT IK IS 
Sbjct: 547 TDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISM 606

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              R+IVVRD+NRFHH K G+CSC DYW
Sbjct: 607 ATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 234/441 (53%), Gaps = 17/441 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+ P+RN V +  ++  + +    ++A++LFL +   G      T SSVL  C  L  
Sbjct: 12  VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT---NNVEDGRRVFDDMNESNVVSWTSL 150
              G+Q+H   ++ G A DV V  SLVD+Y +     +V+D R+VF+ M E NV+SWT++
Sbjct: 72  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131

Query: 151 LSGYARNKMNDR-VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ YA++   D+  +ELF +M    I+PN F+FS+VL    +     T  QV++  +K G
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
              V  V N+LISMY +S  + DAR  FD + +++ +++N++V GY  N    EAF  FN
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G  ++  TF S++   A+   +    Q+H ++LK G   +  I   L+  YS+CG
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A ++F+ M E ++V+SWT+MI+G  ++G    A+  F +M   G +PN  TY  +L
Sbjct: 312 NIEAAFQVFNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVG-----TALLNAYVKKGILDEAAKVFELIDE--- 441
           +A   V           + Y++   V        +++   + G+L EA    E I+    
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA---MEFINSMPL 427

Query: 442 -KDIVAWSAMLAGYAQIGDTE 461
             D + W  +L      G+TE
Sbjct: 428 MADALVWRTLLGACRVHGNTE 448



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 240/459 (52%), Gaps = 21/459 (4%)

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           +VFD M E N+V+WT +++ +A+       ++LF  M++ G  P+ FT+S+VL    + G
Sbjct: 11  KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM---VRDARAVFDGMEDRDSITWNS 250
           ++A   Q+H+ VI+ G  +   V  +L+ MY K      V D+R VF+ M + + ++W +
Sbjct: 71  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130

Query: 251 MVAGYV-TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           ++  Y  + E   EA E F  M          +F SV+K C    +     Q++S  +K 
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           GI   + +   L+  Y++ G+MEDA K F ++ E K++VS+ A++ G+ +N   + A   
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFE-KNLVSYNAIVDGYAKNLKSEEAFLL 249

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F ++   G+  + FT++ +L+   ++       Q+H  ++K  Y+ +  +  AL++ Y +
Sbjct: 250 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 309

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G ++ A +VF  ++++++++W++M+ G+A+ G    A++++ ++   G KPNE T+ +V
Sbjct: 310 CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAV 369

Query: 486 INACTAPSAAVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           ++AC+      E  K F++      I  ++ +  C    +V +  + G +  A E     
Sbjct: 370 LSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYAC----MVDLLGRSGLLVEAMEFINSM 425

Query: 542 R-KRDLVSWNSMICGYAQHGHT---KKALEVFKEMRRQD 576
               D + W +++     HG+T   + A E+  E    D
Sbjct: 426 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDD 464



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 170/337 (50%), Gaps = 2/337 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDS-LHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +F++ P+ N + +  ++  Y +     +EA+ LF  +    +     + SSVLK CG 
Sbjct: 114 RKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 173

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G QV+   VK G A    V  SL+ +Y R+  +ED R+ FD + E N+VS+ ++
Sbjct: 174 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 233

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GYA+N  ++    LF+ +   GI  ++FTF+++L   A  G +    Q+H  ++K G 
Sbjct: 234 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 293

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    +CNALISMY +   +  A  VF+ MEDR+ I+W SM+ G+  +     A E F+ 
Sbjct: 294 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 353

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           M   G +    T+V+V+  C+    +    +  +S   ++GI         ++    + G
Sbjct: 354 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 413

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            + +A +  + M  M D + W  ++     +G  +L 
Sbjct: 414 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 450


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 286/830 (34%), Positives = 458/830 (55%), Gaps = 25/830 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGC 90
           + +FD + +++   YN LL  Y R++L ++A++LFL +     L     TL  V K C  
Sbjct: 148 RGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAG 207

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           + D   G  VH   +K+G   D  V  +L+ +Y +   VE   +VF+ M   N+VSW S+
Sbjct: 208 VADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSV 267

Query: 151 LSGYARNKMNDRVLELFHRMQV---EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +   + N        +F R+ +   EG+ P+  T  TV+   A  G V   + VH +  K
Sbjct: 268 MYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFK 327

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G     +V N+L+ MY K   + +ARA+FD    ++ ++WN+++ GY         FE 
Sbjct: 328 LGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFEL 387

Query: 268 FNNMGLA-GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
              M       +   T ++V+  C+   +L   +++H    ++G   D  +    + AY+
Sbjct: 388 LQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYA 447

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC  ++ A ++F  M E K V SW A+I  H QNG    +++ F  M   G+ P+ FT  
Sbjct: 448 KCSSLDCAERVFCGM-EGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIG 506

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L A   +       ++H  +++   E    +G +L++ Y++   +     +F+ ++ K
Sbjct: 507 SLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENK 566

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            +V W+ M+ G++Q      A+  +RQ+ S G+KP E   + V+ AC+  SA +  GK+ 
Sbjct: 567 SLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSA-LRLGKEV 625

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H+ ++KA L+    V+ AL+ MY+K G +E +  +F R  ++D   WN +I GY  HGH 
Sbjct: 626 HSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHG 685

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            KA+E+F+ M+ +    D  TF+GV+ AC HAGLV EG +Y   M N + + P +EHY+C
Sbjct: 686 LKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYAC 745

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           +VD+  RAG L +A+ ++N MP    + +W ++L++CR              L+ L+P+ 
Sbjct: 746 VVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNK 805

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           +  YVLLSN+YA  G W E  +VR+ M +  + K+AG SWIE+    Y FL  D S  +S
Sbjct: 806 AENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSES 865

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            +I     +L  ++   GYKPDTS VL ++++E K  IL  HSE+LAI+FGL+ T  G  
Sbjct: 866 KKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTT 925

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L++ KNLR+C DCH  IKL+SK+ +RDI+VRD  RFHHFK GLC+CGD+W
Sbjct: 926 LRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 163/586 (27%), Positives = 282/586 (48%), Gaps = 16/586 (2%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           +L+ CG   +   GR+VH     S   R DV +ST ++ +Y    +  D R VFD   E 
Sbjct: 98  LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157

Query: 143 NVVSWTSLLSGYARNKMNDRVLELF-HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
           ++  + +LLSGY+RN +    + LF   +    + P++FT   V    A    V     V
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H + +K GG     V NALI+MY K   V  A  VF+ M +R+ ++WNS++     N   
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277

Query: 262 MEAFETFNNMGLA---GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            E    F  + ++   G     +T V+VI  CA   E+R+   +H    K GI  +  + 
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVN 337

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EG 377
             L+  YSKCG + +A  +F  M   K+VVSW  +I G+ + G          +M R E 
Sbjct: 338 NSLVDMYSKCGYLGEARALFD-MNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEK 396

Query: 378 VRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           VR N  T   +L A       +S  ++H +  +  + K   V  A + AY K   LD A 
Sbjct: 397 VRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAE 456

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF  ++ K + +W+A++  +AQ G    ++ ++  +   G+ P+ FT  S++ AC A  
Sbjct: 457 RVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLAC-ARL 515

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             +  GK+ H   ++  L     +  +L+++Y +  ++     +F +   + LV WN MI
Sbjct: 516 KFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMI 575

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            G++Q+    +AL+ F++M    ++   I   GV+ AC+    +  G++     +  H  
Sbjct: 576 TGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAH-- 633

Query: 614 YPTMEHYSC-MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                  +C ++D+Y++ G +E++ +I +R+     A VW  ++A 
Sbjct: 634 LSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEA-VWNVIIAG 678



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 4/166 (2%)

Query: 496 VEQGKQFHA-CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           +  G++ HA  S   KL N + +S+ ++ MYS  G+   +  VF   +++DL  +N+++ 
Sbjct: 108 IHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLS 167

Query: 555 GYAQHGHTKKALEVFKE-MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
           GY+++   + A+ +F E +   DL  D  T   V  AC     V+ G+    + +     
Sbjct: 168 GYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGF 227

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
                  + ++ +Y + G +E A+ +   M    +   W +V+ AC
Sbjct: 228 SDAFVG-NALIAMYGKCGFVESAVKVFETMR-NRNLVSWNSVMYAC 271


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 289/793 (36%), Positives = 452/793 (56%), Gaps = 29/793 (3%)

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
           LGLPL   T + +++        + G+  H   +K+ F   + +  +L+ +Y +    + 
Sbjct: 13  LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
            +++FD M + NVVSW SL+SGY +      V+ LF   ++  ++ + FTFS  L V   
Sbjct: 73  AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
              +     +H ++  +G      + N+LI MY K   +  AR VF+  ++ DS++WNS+
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT--TKELRLARQLHSQVLKN 309
           +AGYV    + E       M   G  L      S +K C +  +  +   + LH   +K 
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI-----D 364
           G+D D  + T L+  Y+K G +EDA+KIF +M +  +VV + AMI+G LQ   +     +
Sbjct: 253 GLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPD-PNVVMYNAMIAGFLQMETMADEFAN 311

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALL 420
            A+  F +M   G++P+ FT+S IL A   +  F    Q+HA I K N +    +G AL+
Sbjct: 312 EAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALV 371

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
             Y   G +++  K F    + D+V+W++++ G+ Q G  EG + ++ +L   G KP+EF
Sbjct: 372 ELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEF 431

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T S +++AC A  AAV+ G+Q HA +IK  + N   + ++ + MY+K G+I+SA+  FK 
Sbjct: 432 TISIMLSAC-ANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKE 490

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
            +  D+VSW+ MI   AQHG  K+A+++F+ M+   +  + ITF+GV+ AC+H GLV+EG
Sbjct: 491 TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG 550

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC- 659
            +YF+IM  +H I P ++H +C+VDL  RAG L +A   I    F     +WR++L+AC 
Sbjct: 551 LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACR 610

Query: 660 -------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                        R+I L+P  +A YVLL N+Y   G       +R LM DR VKKE G 
Sbjct: 611 VHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGL 670

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE-A 765
           SWIEV N  +SF+AGD SHP S  IY +LEE+   +K   Y  D   V    + +HK+ +
Sbjct: 671 SWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNS 729

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
           ++S HSE+LA+ FG+++ P  AP++++KNLR C  CH  +KL S+LE R+I++RD  RFH
Sbjct: 730 MVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFH 789

Query: 826 HFKEGLCSCGDYW 838
            F++G CSCGDYW
Sbjct: 790 RFRDGSCSCGDYW 802



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 166/561 (29%), Positives = 271/561 (48%), Gaps = 17/561 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFDR P+RN V +N L+  Y +   + E +NLF   R   L L   T S+ L  CG  
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR +H     SG    V ++ SL+D+Y +   ++  R VF+  +E + VSW SL+
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD--EGIVATAVQVHTMVIKNG 209
           +GY R   ND +L L  +M   G+  NS+   + L          +     +H   +K G
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLG 253

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-----TNELHMEA 264
            ++   V  AL+  Y K   + DA  +F  M D + + +N+M+AG++      +E   EA
Sbjct: 254 LDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEA 313

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F  M   G + +  TF S++K C+T +     +Q+H+Q+ K  +  D  I   L+  
Sbjct: 314 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 373

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           YS  G +ED  K F    ++ DVVSWT++I GH+QNG  +  +  F ++   G +P+ FT
Sbjct: 374 YSLSGSIEDGLKCFHSTPKL-DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFT 432

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            SI+L+A   ++      Q+HA+ IKT       +  + +  Y K G +D A   F+   
Sbjct: 433 ISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETK 492

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             DIV+WS M++  AQ G  + AV ++  +   G+ PN  TF  V+ AC+      E  +
Sbjct: 493 NPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLR 552

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNI-ESASEVFKRQRKRDLVSWNSMICGYAQH 559
            F        +   +  S+ +V +  + G + E+ S +     + D V W S++     H
Sbjct: 553 YFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH 612

Query: 560 GHTKKALEVFKEMRRQDLEFD 580
               KA +  K +  + +E +
Sbjct: 613 ----KATDTGKRVAERVIELE 629


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/672 (40%), Positives = 416/672 (61%), Gaps = 53/672 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM--GLAG 275
           N ++S Y K   V +   +FD M  RD ++WNS+++GY    L  ++ + +N M      
Sbjct: 79  NTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGS 138

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK-------- 327
             L R TF +++ L +    ++L RQ+H  V+K G      + + L+  YSK        
Sbjct: 139 FNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCAR 198

Query: 328 -----------------------CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
                                  CG++ED+ ++F  MRE +D +SWT+MI+G  QNG   
Sbjct: 199 KVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRE-RDSISWTSMITGFTQNGLDR 257

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALL 420
            A++ F +M  E ++ + +T+  +LTA   V   Q    VHA+II+T+Y+ +  V +AL+
Sbjct: 258 DAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALV 317

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + Y K   +  A  VF+ +  K++V+W+AML GY Q G +E AVK +  +   G++P++F
Sbjct: 318 DMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDF 377

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T  SVI++C A  A++E+G QFHA ++ + L + + VS+ALVT+Y K G+IE +  +F  
Sbjct: 378 TLGSVISSC-ANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNE 436

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              +D V+W +++ GYAQ G   + + +F+ M    L+ D +TFIGV++AC+ AGLV++G
Sbjct: 437 ISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKG 496

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            Q F+ M+NEH I P  +HY+CM+DL+SRAG +E+A + IN+MPF+  A  W T+L++CR
Sbjct: 497 NQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCR 556

Query: 661 --------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                         L+ L PH++A YVLLS++YAA G W+E AR+RK M D+ ++KE G 
Sbjct: 557 FYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGC 616

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SWI+ KN+ + F A D S+P S+QIYS+LE+L+ ++   GY PD + VL D+ D  K  +
Sbjct: 617 SWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKM 676

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           L+ HSE+LAIAFGL+  P G P+++VKNLRVC DCH   K ISK+  R+I+VRDT RFH 
Sbjct: 677 LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHL 736

Query: 827 FKEGLCSCGDYW 838
           FK+G CSCGD+W
Sbjct: 737 FKDGTCSCGDFW 748



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 260/569 (45%), Gaps = 87/569 (15%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           ++LK C    +    + +H   +K+    +  +  +L+  Y +  ++    +VFD M   
Sbjct: 14  ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSF--------------------- 180
           N+ SW ++LS Y++      +  LF  M + +G+  NS                      
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 181 -----------TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
                      TFST+L + +  G V    Q+H  V+K G      V + L+ MY K  M
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193

Query: 230 VRDARAVFD-------------------------------GMEDRDSITWNSMVAGYVTN 258
           +  AR VFD                                M +RDSI+W SM+ G+  N
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI- 317
            L  +A + F  M L   ++ + TF SV+  C     L+  +Q+H+ +++   D+  NI 
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT--DYKDNIF 311

Query: 318 -RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
             + L+  Y KC  ++ A  +F  M   K+VVSWTAM+ G+ QNG  + AV  F  M + 
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKM-TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKY 370

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           G+ P+ FT   ++++   ++      Q HA  + +      +V  AL+  Y K G ++++
Sbjct: 371 GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDS 430

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            ++F  I  KD V W+A+++GYAQ G     + ++  + + G+KP++ TF  V++AC+  
Sbjct: 431 HRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR- 489

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVS-----SALVTMYSKKGNIESASE-VFKRQRKRDL 546
           +  VE+G Q      ++ +N    V      + ++ ++S+ G IE A   + K     D 
Sbjct: 490 AGLVEKGNQI----FESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDA 545

Query: 547 VSWNSMICGYAQHGHT---KKALEVFKEM 572
           +SW +++     +G+    K A E   E+
Sbjct: 546 ISWATLLSSCRFYGNMDIGKWAAEFLMEL 574



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 259/558 (46%), Gaps = 85/558 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSL---HQEALNLFL---GIRRLGLPLFGSTLSSVL 85
           + LFD  P+R+ V +N L+  Y    L     +A NL L   G   L    F STL  + 
Sbjct: 95  EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITF-STLLILA 153

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY---------------------- 123
              GC+     GRQ+H   VK GF   V V + LVD+Y                      
Sbjct: 154 SKRGCV---KLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVV 210

Query: 124 ---------MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
                    MR   VED +R+F +M E + +SWTS+++G+ +N ++   +++F  M++E 
Sbjct: 211 MYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLEN 270

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           ++ + +TF +VL        +    QVH  +I+   +    V +AL+ MY K K ++ A 
Sbjct: 271 LQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAE 330

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
           AVF  M  ++ ++W +M+ GY  N    EA +TF++M   G E    T  SVI  CA   
Sbjct: 331 AVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLA 390

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            L    Q H++ L +G+     +   L+  Y KCG +ED+ ++F+ +   KD V+WTA++
Sbjct: 391 SLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEI-SFKDEVTWTALV 449

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
           SG+ Q G  +  +  F  M   G++P+  T+                             
Sbjct: 450 SGYAQFGKANETIGLFESMLAHGLKPDKVTF----------------------------- 480

Query: 415 VGTALLNAYVKKGILDEAAKVFE-LIDEKDIVA----WSAMLAGYAQIGDTEGAVKIYRQ 469
               +L+A  + G++++  ++FE +I+E  IV     ++ M+  +++ G  E A     +
Sbjct: 481 --IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINK 538

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV-TMYSKK 528
           +      P+  ++++++++C      ++ GK   A     +L+     S  L+ ++Y+ K
Sbjct: 539 MP---FSPDAISWATLLSSCRF-YGNMDIGKW--AAEFLMELDPHNTASYVLLSSVYAAK 592

Query: 529 GNIESASEVFKRQRKRDL 546
           G  E  + + K  R + L
Sbjct: 593 GKWEEVARLRKDMRDKGL 610



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 217/444 (48%), Gaps = 72/444 (16%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM- 341
           + +++KLC  T     A+ LHS ++K     +  +   L+ +Y+K G +  A K+F  M 
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 342 --------------------REM---------KDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
                                EM         +D VSW ++ISG+   G I  +V  +  
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131

Query: 373 MTRE--GVRPNGFTYS--IILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
           M +       N  T+S  +IL ++        Q+H H++K  +     VG+ L++ Y K 
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 427 GILDEAAKVFELIDEKDIV-------------------------------AWSAMLAGYA 455
           G++  A KVF+ + EK++V                               +W++M+ G+ 
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G    A+ I+R++  E ++ +++TF SV+ AC     A+++GKQ HA  I+    + +
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGG-VMALQEGKQVHAYIIRTDYKDNI 310

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V+SALV MY K  NI+SA  VFK+   +++VSW +M+ GY Q+G++++A++ F +M++ 
Sbjct: 311 FVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKY 370

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI-YPTMEHYSCMVDLYSRAGMLE 634
            +E D  T   VI++C +   ++EG Q+    +    I + T+ +   +V LY + G +E
Sbjct: 371 GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSN--ALVTLYGKCGSIE 428

Query: 635 KAMDIINRMPFAASATVWRTVLAA 658
            +  + N + F    T W  +++ 
Sbjct: 429 DSHRLFNEISFKDEVT-WTALVSG 451



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 118/227 (51%), Gaps = 2/227 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  +++F +   +N V +  +L  Y ++   +EA+  F  +++ G+     TL SV+ +C
Sbjct: 327 KSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSC 386

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G Q H   + SG    + VS +LV LY +  ++ED  R+F++++  + V+WT
Sbjct: 387 ANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWT 446

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +L+SGYA+    +  + LF  M   G+KP+  TF  VL   +  G+V    Q+   +I  
Sbjct: 447 ALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINE 506

Query: 209 GGEV-VTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
            G V +      +I ++ ++  + +AR   + M    D+I+W ++++
Sbjct: 507 HGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/757 (36%), Positives = 437/757 (57%), Gaps = 19/757 (2%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q H + V  GF  D+++ T L         +   R +F  +   +V  +  L+ G++ N+
Sbjct: 38  QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 159 MNDRVLELF-HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                L +F H  +   +KPNS T++  +   +          +H   I +G +    + 
Sbjct: 98  SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGA 276
           + ++ MY K   V DAR VFD M ++D+I WN+M++GY  NE+++E+ + F ++   +  
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            L  +T + ++   A  +ELRL  Q+HS   K G      + TG +  YSKCGK++ AS 
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY-SIILTAQPAV 395
           +F   R   D+V++ AMI G+  NG  +L+++ F ++   G +    T  S++  +   +
Sbjct: 278 LFREFRR-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLM 336

Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
             + +H + +K+N+    SV TAL   Y K   ++ A K+F+   EK + +W+AM++GY 
Sbjct: 337 LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G TE A+ ++R++ +    PN  T + +++AC A   A+  GK  H         +++
Sbjct: 397 QNGLTEDAISLFREMQNSEFSPNPVTITCILSAC-AQLGALSLGKWVHDLVRSTDFESSI 455

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            VS+AL+ MY+K G+I  A  +F    K++ V+WN+MI GY  HGH ++AL +F EM   
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNS 515

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            +    +TF+ V+ AC+HAGLV EG + F+ M++ +   P+++HY+C+VD+  RAG L++
Sbjct: 516 GIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQR 575

Query: 636 AMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAA 681
           A+  I  MP     +VW T+L ACR              L  L P +   +VLLSN+++A
Sbjct: 576 ALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
             ++ + A VR+    RK+ K  GY+ IE+    + F +GD SHPQ   I+ KLE+L  +
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGK 695

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +++AGY+P+T   L D+++E +E ++  HSERLAIAFGL+AT  G  ++I+KNLRVC DC
Sbjct: 696 MREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDC 755

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           HT  KLISK+  R IVVRD NRFHHFK+G+CSCGDYW
Sbjct: 756 HTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 260/538 (48%), Gaps = 11/538 (2%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCEC 104
           +N L+  +  +     +L +F  +R+   L    ST +  +       D   G  +H + 
Sbjct: 86  FNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQA 145

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +  G   ++ + +++V +Y +   VED R+VFD M E + + W +++SGY +N+M    +
Sbjct: 146 IVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205

Query: 165 ELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           ++F  +  E   + ++ T   +L  +A+   +   +Q+H++  K G      V    IS+
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K   ++ A  +F      D + +N+M+ GY +N     +   F  + L+GA+L  ST 
Sbjct: 266 YSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTL 325

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           VS++ +   +  L L   +H   LK+      ++ T L   YSK  ++E A K+F    E
Sbjct: 326 VSLVPV---SGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPE 382

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---- 399
            K + SW AMISG+ QNG  + A++ F +M      PN  T + IL+A   +        
Sbjct: 383 -KSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKW 441

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           VH  +  T++E S  V TAL+  Y K G + EA ++F+ + +K+ V W+ M++GY   G 
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGH 501

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
            + A+ I+ ++ + G+ P   TF  V+ AC+      E  + F++   +     ++   +
Sbjct: 502 GQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKALEVFKEMRRQD 576
            +V +  + G+++ A +  +    +   S W +++     H  T  A  V +++   D
Sbjct: 562 CVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELD 619



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 175/368 (47%), Gaps = 6/368 (1%)

Query: 26  FYSKKD-QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSS 83
           F+  +D + +FDR P+++ + +N ++  Y ++ ++ E++ +F   I      L  +TL  
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +L     L +   G Q+H    K+G      V T  + LY +   ++    +F +    +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPD 286

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +V++ +++ GY  N   +  L LF  + + G K  S   ST++ ++   G +     +H 
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKS---STLVSLVPVSGHLMLIYAIHG 343

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
             +K+     TSV  AL ++Y K   +  AR +FD   ++   +WN+M++GY  N L  +
Sbjct: 344 YSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   F  M  +       T   ++  CA    L L + +H  V     +    + T L+ 
Sbjct: 404 AISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y+KCG + +A ++F  M + K+ V+W  MISG+  +G    A+  F +M   G+ P   
Sbjct: 464 MYAKCGSIAEARRLFDFMPK-KNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPV 522

Query: 384 TYSIILTA 391
           T+  +L A
Sbjct: 523 TFLCVLYA 530



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 133/263 (50%), Gaps = 3/263 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K   +LF    + + V YN ++  Y  +   + +L+LF  +   G  L  STL S++   
Sbjct: 273 KMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVS 332

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L   +    +H   +KS F    +VST+L  +Y + N +E  R++FD+  E ++ SW 
Sbjct: 333 GHL---MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++SGY +N + +  + LF  MQ     PN  T + +L   A  G ++    VH +V   
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             E    V  ALI MY K   + +AR +FD M  ++ +TWN+M++GY  +    EA   F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIF 509

Query: 269 NNMGLAGAELTRSTFVSVIKLCA 291
           + M  +G   T  TF+ V+  C+
Sbjct: 510 SEMLNSGIAPTPVTFLCVLYACS 532



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 90/179 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD SP+++   +N ++  Y ++ L ++A++LF  ++         T++ +L  C  L
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQL 433

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH     + F   + VST+L+ +Y +  ++ + RR+FD M + N V+W +++
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMI 493

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           SGY  +      L +F  M   GI P   TF  VL   +  G+V    ++   +I   G
Sbjct: 494 SGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 13/174 (7%)

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           S ++    Q HA  +     N + + + L    S  G I  A ++F   ++ D+  +N +
Sbjct: 30  STSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89

Query: 553 ICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACT-----HAGLVDEGQQYFDI 606
           + G++ +     +L VF  +R+  DL+ +  T+   I+A +      AG V  GQ   D 
Sbjct: 90  MRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDG 149

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
             +E      +   S +V +Y +   +E A  + +RMP      +W T+++  R
Sbjct: 150 CDSE------LLLGSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYR 196


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 294/856 (34%), Positives = 470/856 (54%), Gaps = 44/856 (5%)

Query: 5    PALKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALN 64
            P+ K  ++     P  S R   ++K D+              N  + ++C     + A+ 
Sbjct: 394  PSRKYFLSSYLDVPRSSTRVGAFAKLDE--------------NTKICKFCEVGDLRNAVE 439

Query: 65   LFLGIRRLGLPLFGSTLSSVLKTCG---CLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
            L    ++  L L  +  SS+L+ C    CL +   G+ VH     +G   +  +   LV 
Sbjct: 440  LLRMSQKSELDL--NAYSSILQLCAEHKCLQE---GKMVHSVISSNGIPIEGVLGAKLVF 494

Query: 122  LYMRTNNVEDGRRVFDD-MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
            +Y+    + +GRR+FD  ++++ V  W  ++S YA+       + LF +MQ  GI  NS+
Sbjct: 495  MYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSY 554

Query: 181  TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            TFS +L   A  G V    ++H  V K G     +V N+LI+ Y KS  V  A  +FD +
Sbjct: 555  TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 614

Query: 241  EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             DRD ++WNSM++G V N     A E F  M +    +  +T V+ +  CA    L L R
Sbjct: 615  GDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGR 674

Query: 301  QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
             LH Q +K     +      L+  YSKCG + DA + F  M + K VVSWT++I+ +++ 
Sbjct: 675  ALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQ-KTVVSWTSLIAAYVRE 733

Query: 361  GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVG 416
            G  D A+  F +M  +GV P+ ++ + +L A    +       VH +I K N      V 
Sbjct: 734  GLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVS 793

Query: 417  TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
             AL++ Y K G ++EA  VF  I  KDIV+W+ M+ GY++      A+K++ ++  E  +
Sbjct: 794  NALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-R 852

Query: 477  PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
            P+  T + ++ AC +  AA+E G+  H C ++   ++ L V++AL+ MY K G++  A  
Sbjct: 853  PDGITMACLLPACGSL-AALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARL 911

Query: 537  VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
            +F    ++DL++W  MI G   HG   +A+  F++MR   ++ D ITF  ++ AC+H+GL
Sbjct: 912  LFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGL 971

Query: 597  VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
            ++EG  +F+ M++E ++ P +EHY+CMVDL +R G L KA ++I  MP    AT+W  +L
Sbjct: 972  LNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALL 1031

Query: 657  AACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
              CR+                L+P ++  YVLL+N+YA    W+E  ++R+ +  R +KK
Sbjct: 1032 CGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKK 1091

Query: 703  EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
              G SWIEV+ K  +F++ D +HPQ+  I+S L  L  ++K+ G+ P   Y L +  D  
Sbjct: 1092 SPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDME 1151

Query: 763  KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
            KE  L  HSE+LA+AFG++  P+G  +++ KNLRVC DCH + K +SK  RR+I++RD+N
Sbjct: 1152 KEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSN 1211

Query: 823  RFHHFKEGLCSCGDYW 838
            RFHHFK+G CSC D+W
Sbjct: 1212 RFHHFKDGFCSCRDFW 1227


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 272/757 (35%), Positives = 437/757 (57%), Gaps = 19/757 (2%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q H + +  GF  D+++ T L         +   R +F  +   +V  +  L+ G++ N+
Sbjct: 38  QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 159 MNDRVLELF-HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                L +F H  +   +KPNS T++  +   +          +H   + +G +    + 
Sbjct: 98  SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGA 276
           + ++ MY K   V DAR VFD M ++D+I WN+M++GY  NE+++E+ + F ++   +  
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            L  +T + ++   A  +ELRL  Q+HS   K G      + TG +  YSKCGK++  S 
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY-SIILTAQPAV 395
           +F   R+  D+V++ AMI G+  NG  +L+++ F ++   G R    T  S++  +   +
Sbjct: 278 LFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336

Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
             + +H + +K+N+    SV TAL   Y K   ++ A K+F+   EK + +W+AM++GY 
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G TE A+ ++R++      PN  T + +++AC A   A+  GK  H         +++
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSAC-AQLGALSLGKWVHDLVRSTDFESSI 455

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            VS+AL+ MY+K G+I  A  +F    K++ V+WN+MI GY  HG  ++AL +F EM   
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            +    +TF+ V+ AC+HAGLV EG + F+ M++ +   P+++HY+CMVD+  RAG L++
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQR 575

Query: 636 AMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAA 681
           A+  I  M     ++VW T+L ACR              L  L P +   +VLLSN+++A
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
             ++ + A VR+    RK+ K  GY+ IE+    + F +GD SHPQ  +IY KLE+L  +
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGK 695

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +++AGY+P+T   L D+++E +E ++  HSERLAIAFGL+AT  G  ++I+KNLRVC DC
Sbjct: 696 MREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDC 755

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           HTV KLISK+  R IVVRD NRFHHFK+G+CSCGDYW
Sbjct: 756 HTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 247/495 (49%), Gaps = 10/495 (2%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCEC 104
           +N L+  +  +     +L++F  +R+   L    ST +  +       D   GR +H + 
Sbjct: 86  FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           V  G   ++ + +++V +Y +   VED R+VFD M E + + W +++SGY +N+M    +
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205

Query: 165 ELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           ++F  +  E   + ++ T   +L  +A+   +   +Q+H++  K G      V    IS+
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K   ++   A+F      D + +N+M+ GY +N     +   F  + L+GA L  ST 
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           VS++ +   +  L L   +H   LK+      ++ T L   YSK  ++E A K+F    E
Sbjct: 326 VSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---- 399
            K + SW AMISG+ QNG  + A++ F +M +    PN  T + IL+A   +        
Sbjct: 383 -KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           VH  +  T++E S  V TAL+  Y K G + EA ++F+L+ +K+ V W+ M++GY   G 
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
            + A+ I+ ++ + G+ P   TF  V+ AC+      E  + F++   +     ++   +
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561

Query: 520 ALVTMYSKKGNIESA 534
            +V +  + G+++ A
Sbjct: 562 CMVDILGRAGHLQRA 576



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 178/368 (48%), Gaps = 6/368 (1%)

Query: 26  FYSKKD-QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSS 83
           F+  +D + +FDR P+++ + +N ++  Y ++ ++ E++ +F   I      L  +TL  
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +L     L +   G Q+H    K+G      V T  + LY +   ++ G  +F +  + +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +V++ +++ GY  N   +  L LF  + + G +  S   ST++ ++   G +     +H 
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS---STLVSLVPVSGHLMLIYAIHG 343

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
             +K+      SV  AL ++Y K   +  AR +FD   ++   +WN+M++GY  N L  +
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   F  M  +       T   ++  CA    L L + +H  V     +    + T L+ 
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y+KCG + +A ++F +M + K+ V+W  MISG+  +G    A+N F +M   G+ P   
Sbjct: 464 MYAKCGSIAEARRLFDLMTK-KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522

Query: 384 TYSIILTA 391
           T+  +L A
Sbjct: 523 TFLCVLYA 530



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 3/263 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K   +LF    + + V YN ++  Y  +   + +L+LF  +   G  L  STL S++   
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L   +    +H  C+KS F    +VST+L  +Y + N +E  R++FD+  E ++ SW 
Sbjct: 333 GHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++SGY +N + +  + LF  MQ     PN  T + +L   A  G ++    VH +V   
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             E    V  ALI MY K   + +AR +FD M  ++ +TWN+M++GY  +    EA   F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509

Query: 269 NNMGLAGAELTRSTFVSVIKLCA 291
             M  +G   T  TF+ V+  C+
Sbjct: 510 YEMLNSGITPTPVTFLCVLYACS 532



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 92/179 (51%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD SP+++   +N ++  Y ++ L ++A++LF  +++        T++ +L  C  L
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH     + F   + VST+L+ +Y +  ++ + RR+FD M + N V+W +++
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           SGY  +      L +F+ M   GI P   TF  VL   +  G+V    ++   +I   G
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 13/174 (7%)

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           S ++    Q HA  I     N + + + L    S  G I  A ++F   ++ D+  +N +
Sbjct: 30  STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89

Query: 553 ICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACT-----HAGLVDEGQQYFDI 606
           + G++ +     +L VF  +R+  DL+ +  T+   I+A +      AG V  GQ   D 
Sbjct: 90  MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
             +E      +   S +V +Y +   +E A  + +RMP      +W T+++  R
Sbjct: 150 CDSE------LLLGSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYR 196


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 284/783 (36%), Positives = 449/783 (57%), Gaps = 34/783 (4%)

Query: 77  FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF 136
           F S   S  KT       +  +++H   V SG  +   +S  LV+LY    +V   R  F
Sbjct: 79  FNSLFDSCTKT-------LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTF 131

Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIV 195
           D +   +V +W S++S Y RN      ++ F+++  V   + + +TF  VL        +
Sbjct: 132 DQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ---TL 188

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
               ++H  V K G +    V  +LI MY +   V  AR++FD M  RD  +WN+M++G 
Sbjct: 189 VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGL 248

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           + N    +A +  + M L G  +   T  S++ +CA   ++  A  +H  V+K+G++F+ 
Sbjct: 249 IQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL 308

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            +   L+  Y+K G + DA K+F  M  ++DVVSW ++I+ + QN     A  FF +M  
Sbjct: 309 FVSNALINMYAKFGNLGDAQKVFQQMF-LRDVVSWNSIIAAYEQNDDPVTARGFFFKMQL 367

Query: 376 EGVRPNGFTY----SIILTAQPAVSPFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILD 430
            G+ P+  T     SI   ++   +   VH  I++  +  ++  +G A+++ Y K G++D
Sbjct: 368 NGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVID 427

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINAC 489
            A KVF LI  KD+V+W+ +++GY Q G    A+++YR +     +K N+ T+ S++ A 
Sbjct: 428 SAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSIL-AA 486

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
            A   A++QG + H   IK  L+  + V + L+ +Y K G +  A  +F +  +   V W
Sbjct: 487 YAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPW 546

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           N++I  +  HGH +KAL++F+EM+ + ++ D +TFI +++AC+H+GLVDEG+ +F +M  
Sbjct: 547 NAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-Q 605

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------- 660
           E+ I P+++HY CMVDL  RAG LE A D I  MP    A++W  +L ACR         
Sbjct: 606 EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGK 665

Query: 661 -----LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                L  +   +   YVLLSN+YA  G W+   +VR L  +R +KK  G+S IEV  + 
Sbjct: 666 FASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRV 725

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLA 775
             F  G+ SHP+  +IY++L  L+ ++K  GY PD S+VLQD++++ KE IL+ HSERLA
Sbjct: 726 DIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLA 785

Query: 776 IAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           IAFG+++TP  + ++I KNLRVCGDCH   K IS++  R+IVVRD+ RFHHFK G+CSCG
Sbjct: 786 IAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCG 845

Query: 836 DYW 838
           DYW
Sbjct: 846 DYW 848



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 174/540 (32%), Positives = 288/540 (53%), Gaps = 19/540 (3%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTCGCL 91
           FD+  +++   +N ++  Y R+   +EA++ F   L + +     +  T   VLK C  L
Sbjct: 131 FDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFY--TFPPVLKACQTL 188

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR++HC   K GF  DV V+ SL+ +Y R   V   R +FDDM   ++ SW +++
Sbjct: 189 VD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMI 245

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG  +N    + L++   M++EGI  +S T +++L V A  G ++TA  +H  VIK+G E
Sbjct: 246 SGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLE 305

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NALI+MY K   + DA+ VF  M  RD ++WNS++A Y  N+  + A   F  M
Sbjct: 306 FELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKM 365

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSKCGK 330
            L G E    T VS+  + A +++ + +R +H  +++ G   +   I   +M  Y+K G 
Sbjct: 366 QLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGV 425

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM--TREGVRPNGFTYSII 388
           ++ A K+F+++  +KDVVSW  +ISG+ QNG    A+  +  M   RE ++ N  T+  I
Sbjct: 426 IDSAHKVFNLI-PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECRE-IKLNQGTWVSI 483

Query: 389 LTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A   V   Q    +H H+IKTN      VGT L++ Y K G L +A  +F  +  +  
Sbjct: 484 LAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESS 543

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V W+A+++ +   G  E A+K++R++  EGVKP+  TF S+++AC+  S  V++GK F  
Sbjct: 544 VPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSH-SGLVDEGKWFFH 602

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
              +  +  +L     +V +  + G +E A +  K      D   W +++     HG+ +
Sbjct: 603 LMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIE 662



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/558 (24%), Positives = 253/558 (45%), Gaps = 54/558 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +SLFD  P R+   +N ++    ++    +AL++   +R  G+ +   T++S+L  C  L
Sbjct: 227 RSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQL 286

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D      +H   +K G   ++ VS +L+++Y +  N+ D ++VF  M   +VVSW S++
Sbjct: 287 GDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSII 346

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG- 210
           + Y +N         F +MQ+ G++P+  T  ++  + A       +  VH  +++ G  
Sbjct: 347 AAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWL 406

Query: 211 -EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E V  + NA++ MY K  ++  A  VF+ +  +D ++WN++++GY  N L  EA E + 
Sbjct: 407 MEAVV-IGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYR 465

Query: 270 NM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            M      +L + T+VS++   A    L+   ++H  ++K  +  D  + T L+  Y KC
Sbjct: 466 MMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKC 525

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G++ DA  +F  +   +  V W A+IS H  +G  + A+  F +M  EGV+P+  T+   
Sbjct: 526 GRLVDAMCLFYQVPR-ESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTF--- 581

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA-- 446
                                        +LL+A    G++DE    F L+ E  I    
Sbjct: 582 ----------------------------ISLLSACSHSGLVDEGKWFFHLMQEYGIKPSL 613

Query: 447 --WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
             +  M+    + G  E A    + +    + P+   + +++ AC      +E GK F +
Sbjct: 614 KHYGCMVDLLGRAGFLEMAYDFIKDMP---LHPDASIWGALLGACRI-HGNIELGK-FAS 668

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL---VSWNSMICG------ 555
             +    +  +     L  +Y+  G  E   +V    R+R L     W+S+         
Sbjct: 669 DRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIF 728

Query: 556 YAQHGHTKKALEVFKEMR 573
           Y  +    K  E++ E+R
Sbjct: 729 YTGNQSHPKCKEIYAELR 746


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 280/826 (33%), Positives = 458/826 (55%), Gaps = 21/826 (2%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            + +F+  P RN V +  L+  Y      +E ++++  +R  G+    +++S V+ +CG L
Sbjct: 215  RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLL 274

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             D   GRQ+  + +KSG    + V  SL+ ++    NV+    +F+ ++E + +SW S++
Sbjct: 275  KDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIV 334

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            + YA+N   +    +F+ M+    + NS T ST+L VL D         +H +V+K G +
Sbjct: 335  AAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFD 394

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             V  VCN L+ MY  +    +A  VF  M  +D I+WNS++A +V +   ++A     +M
Sbjct: 395  SVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSM 454

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
               G  +   TF S +  C + +     R LH  V+ +G+  +  I   L+  Y K G M
Sbjct: 455  IRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGM 514

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
              + ++   M   +DVV+W A+I G+ +N   D A+  F  +  EGV  N  T   +L+A
Sbjct: 515  STSRRVLLQMPR-RDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSA 573

Query: 392  QPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
                         +HA+I+   +E    V  +L+  Y K G L  +  +F  +D + I+ 
Sbjct: 574  CLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIIT 633

Query: 447  WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            W+A+LA  A  G  E  +K+  ++ S G+  ++F+FS  ++A  A  A +E+G+Q H  +
Sbjct: 634  WNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSA-AAKLAVLEEGQQLHGLA 692

Query: 507  IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            +K        + +A   MYSK G I    ++      R L SWN +I    +HG+ ++  
Sbjct: 693  VKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 752

Query: 567  EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            E F EM    ++   +TF+ ++TAC+H GLVD+G  Y+D++  +  + P +EH  C++DL
Sbjct: 753  ETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDL 812

Query: 627  YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
              R+G L +A   I++MP   +  VWR++LA+C+              L  L+P D +++
Sbjct: 813  LGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVF 872

Query: 673  VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
            VL SNM+A TG W++   VRK M  + +KK+   SW+++K+K  SF  GD +HPQ+ +IY
Sbjct: 873  VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIY 932

Query: 733  SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
            +KLE++   +K++GY  DTS  LQD D+E KE  L  HSERLA+A+ L++TP G+ ++I 
Sbjct: 933  AKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 992

Query: 793  KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLR+C DCH+V K +S++  R IV+RD  RFHHF+ GLCSC DYW
Sbjct: 993  KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 188/642 (29%), Positives = 334/642 (52%), Gaps = 22/642 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LFD+ P RN V +N ++    R  L+ E +  F  +  LG+      ++S++  C
Sbjct: 110 KPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTAC 169

Query: 89  ---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
              G +F    G QVH    KSG   DV VST+++ LY     V   R+VF++M + NVV
Sbjct: 170 GRSGSMFRE--GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 227

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVH 202
           SWTSL+ GY+     + V++++  M+ EG++ N  + S V+   G+L DE +     Q+ 
Sbjct: 228 SWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESL---GRQII 284

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             VIK+G E   +V N+LISM+     V  A  +F+ + +RD+I+WNS+VA Y  N    
Sbjct: 285 GQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIE 344

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           E+   FN M     E+  +T  +++ +       +  R +H  V+K G D    +   L+
Sbjct: 345 ESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 404

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+  G+ E+A  +F  M   KD++SW ++++  + +G    A+   C M R G   N 
Sbjct: 405 RMYAGAGRSEEADLVFKQM-PTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNY 463

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T++  L A  +   F     +H  ++ +    +  +G AL++ Y K G +  + +V   
Sbjct: 464 VTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQ 523

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  +D+VAW+A++ GYA+  D + A+  ++ L  EGV  N  T  SV++AC  P   +E+
Sbjct: 524 MPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLER 583

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           GK  HA  + A   +   V ++L+TMY+K G++ S+ ++F     R +++WN+++   A 
Sbjct: 584 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAH 643

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HGH ++ L++  +MR   L  D  +F   ++A     +++EGQQ   + V          
Sbjct: 644 HGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCF- 702

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATV--WRTVLAA 658
            ++   D+YS+ G +    +++  +P + + ++  W  +++A
Sbjct: 703 IFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISA 741



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 291/569 (51%), Gaps = 12/569 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR +H  CVK      V  + +L+++Y +   V+  R +FD M   N VSW +++SG  R
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG-IVATAVQVHTMVIKNGGEVVTS 215
             +    +E F +M   GIKP+SF  ++++      G +    VQVH  V K+G      
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V  A++ +Y    +V  +R VF+ M DR+ ++W S++ GY       E  + + +M   G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            E   ++   VI  C   K+  L RQ+  QV+K+G++    +   L+  +   G ++ A+
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            IF+ + E +D +SW ++++ + QNG I+ +   F  M R     N  T S +L+    V
Sbjct: 317 YIFNQISE-RDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDV 375

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              +    +H  ++K  ++    V   LL  Y   G  +EA  VF+ +  KD+++W++++
Sbjct: 376 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLM 435

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           A +   G +  A+ I   +   G   N  TF+S + AC +P    ++G+  H   + + L
Sbjct: 436 ASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPE-FFDKGRILHGLVVVSGL 494

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            +   + +ALV+MY K G + ++  V  +  +RD+V+WN++I GYA++    KAL  F+ 
Sbjct: 495 FDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQT 554

Query: 572 MRRQDLEFDGITFIGVITACTHAG-LVDEGQQYFDIMVNEHHIYPTMEHY-SCMVDLYSR 629
           +R + +  + IT + V++AC   G L++ G+     +V+    + + EH  + ++ +Y++
Sbjct: 555 LRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAG--FESDEHVKNSLITMYAK 612

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G L  + D+ N +    S   W  +LAA
Sbjct: 613 CGDLSSSQDLFNGLD-NRSIITWNAILAA 640



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 228/455 (50%), Gaps = 12/455 (2%)

Query: 197 TAVQVHTMVIKNGGEVVTSV--CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           T   +H + +K  G V  SV   N LI+MY K   V+ AR +FD M  R+ ++WN+M++G
Sbjct: 76  TGRALHALCVK--GLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSG 133

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNGIDF 313
            V   L++E  E F  M   G + +     S++  C  +  + R   Q+H  V K+G+  
Sbjct: 134 IVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLS 193

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  + T ++  Y   G +  + K+F  M + ++VVSWT+++ G+   G  +  ++ +  M
Sbjct: 194 DVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKSM 252

Query: 374 TREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EGV  N  + S+++++   +       Q+   +IK+  E   +V  +L++ +   G +
Sbjct: 253 RGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNV 312

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           D A  +F  I E+D ++W++++A YAQ G  E + +I+  +     + N  T S++++  
Sbjct: 313 DYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVL 372

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
                  + G+  H   +K   ++ +CV + L+ MY+  G  E A  VFK+   +DL+SW
Sbjct: 373 GDVDHQ-KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISW 431

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           NS++  +   G +  AL +   M R     + +TF   + AC      D+G+    ++V 
Sbjct: 432 NSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVV 491

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
              ++      + +V +Y + G +  +  ++ +MP
Sbjct: 492 S-GLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMP 525



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/331 (22%), Positives = 162/331 (48%), Gaps = 34/331 (10%)

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           +HA  +K     S      L+N Y K G +  A  +F+ +  ++ V+W+ M++G  ++G 
Sbjct: 80  LHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGL 139

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
               ++ ++++   G+KP+ F  +S++ AC    +   +G Q H    K+ L + + VS+
Sbjct: 140 YLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVST 199

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           A++ +Y   G +  + +VF+    R++VSW S++ GY+  G  ++ ++++K MR + +E 
Sbjct: 200 AILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVEC 259

Query: 580 DGITFIGVITACTHAGLVDE---GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +  +   VI++C   GL+ +   G+Q    ++ +  +   +   + ++ ++   G ++ A
Sbjct: 260 NENSMSLVISSC---GLLKDESLGRQIIGQVI-KSGLESKLAVENSLISMFGNMGNVDYA 315

Query: 637 MDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
             I N++    + + W +++AA                    YA  GH +E +R+  LM 
Sbjct: 316 NYIFNQISERDTIS-WNSIVAA--------------------YAQNGHIEESSRIFNLM- 353

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
            R+   E   + +     T   + GD+ H +
Sbjct: 354 -RRFHDEVNSTTV----STLLSVLGDVDHQK 379


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 291/822 (35%), Positives = 455/822 (55%), Gaps = 21/822 (2%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            Q LF+  P  N V +  L+  Y       E LN++  +R+ G+    +T ++V  +CG L
Sbjct: 251  QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 310

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             D V G QV    ++ GF   V+V+ SL+ ++   ++VE+   VFD MNE +++SW +++
Sbjct: 311  EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 370

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            S YA + +    L  FH M+    + NS T S++L V +    +     +H +V+K G +
Sbjct: 371  SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 430

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                +CN L+++Y ++    DA  VF  M +RD I+WNSM+A YV +   ++  +    +
Sbjct: 431  SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 490

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
               G  +   TF S +  C+  + L  ++ +H+ ++  G      +   L+  Y K G M
Sbjct: 491  LQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 550

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             +A K+   M +  D V+W A+I GH +N   + AV  +  +  +G+  N  T   +L A
Sbjct: 551  MEAKKVLQTMPQ-PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGA 609

Query: 392  QPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
              A          +HAHI+ T +E    V  +L+  Y K G L+ +  +F+ +  K  + 
Sbjct: 610  CSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 669

Query: 447  WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            W+AM+A  A  G  E A+KI+ ++ + GV  ++F+FS  + A TA  A +E+G+Q H   
Sbjct: 670  WNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGL-AATANLAVLEEGQQLHGLV 728

Query: 507  IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            IK    + L V++A + MY K G +    ++  +   R  +SWN +I  +A+HG  +KA 
Sbjct: 729  IKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKAR 788

Query: 567  EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            E F EM +   + D +TF+ +++AC H GLVDEG  Y+D M  E  ++P +EH  C++DL
Sbjct: 789  ETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDL 848

Query: 627  YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
              R+G L  A   I  MP   +   WR++LAACR              L+ L P D + Y
Sbjct: 849  LGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAY 908

Query: 673  VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
            VL SN+ A +G W++   +RK M    +KK+   SW+++K+K +SF  G+  HPQ+++I 
Sbjct: 909  VLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRIS 968

Query: 733  SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
            +KL EL    K+AGY PDTS+ L D+D+E KE  L  HSERLA+AFGL+ TP  + L+I 
Sbjct: 969  AKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIF 1028

Query: 793  KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
            KNLRVCGDCH+V K +S +  R IV+RD  RFHHF  G CSC
Sbjct: 1029 KNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 197/638 (30%), Positives = 340/638 (53%), Gaps = 24/638 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GC 90
           +FD    RN   ++ +L  Y R  L++EA+ LF  +  LG+   G  ++S++  C   G 
Sbjct: 151 VFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGY 210

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           + D  F  QVH   VK+G   DV V T+LV  Y     V + +++F++M + NVVSWTSL
Sbjct: 211 MADEGF--QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSL 268

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV---LGVLADEGIVATAVQVHTMVIK 207
           + GY+ +     VL ++ RM+ EG+  N  TF+TV    G+L D+       QV   +I+
Sbjct: 269 MVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ---VLGYQVLGHIIQ 325

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G E   SV N+LISM+     V +A  VFD M + D I+WN+M++ Y  + L  E+   
Sbjct: 326 YGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRC 385

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M     E   +T  S++ +C++   L+  R +H  V+K G+D +  I   L+  YS+
Sbjct: 386 FHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSE 445

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G+ EDA  +F  M E +D++SW +M++ ++Q+G     +    ++ + G   N  T++ 
Sbjct: 446 AGRSEDAELVFQAMTE-RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFAS 504

Query: 388 ILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            L A    +  +    VHA II   +     VG AL+  Y K G++ EA KV + + + D
Sbjct: 505 ALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPD 564

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            V W+A++ G+A+  +   AVK Y+ +  +G+  N  T  SV+ AC+AP   ++ G   H
Sbjct: 565 RVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIH 624

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A  +     +   V ++L+TMY+K G++ S++ +F     +  ++WN+M+   A HG  +
Sbjct: 625 AHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGE 684

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHY 620
           +AL++F EMR   +  D  +F G + A  +  +++EGQQ   +++    E  ++ T    
Sbjct: 685 EALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVT---- 740

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +  +D+Y + G +   + ++ + P   S   W  +++A
Sbjct: 741 NAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISA 777



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 286/584 (48%), Gaps = 42/584 (7%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +H  C+       +  + +L+++Y +  N+E  R VFD+M   N  SW+++LSGY R
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVL------GVLADEGIVATAVQVHTMVIKNGG 210
             + +  + LF +M   G++PN F  ++++      G +ADEG      QVH  V+K G 
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGF-----QVHGFVVKTGI 227

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V  AL+  Y    +V +A+ +F+ M D + ++W S++ GY  +    E    +  
Sbjct: 228 LGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQR 287

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G    ++TF +V   C   ++  L  Q+   +++ G +   ++   L+  +S    
Sbjct: 288 MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 347

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E+A  +F  M E  D++SW AMIS +  +G    ++  F  M       N  T S +L+
Sbjct: 348 VEEACYVFDHMNEC-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 406

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
              +V   +    +H  ++K   + +  +   LL  Y + G  ++A  VF+ + E+D+++
Sbjct: 407 VCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 466

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W++M+A Y Q G     +KI  +L   G   N  TF+S + AC+ P   +E  K  HA  
Sbjct: 467 WNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES-KIVHALI 525

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           I A  ++ L V +ALVTMY K G +  A +V +   + D V+WN++I G+A++    +A+
Sbjct: 526 IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAV 585

Query: 567 EVFKEMRRQDLEFDGITFIGVITACT------------HAGLVDEGQQYFDIMVNEHHIY 614
           + +K +R + +  + IT + V+ AC+            HA +V  G +  D + N     
Sbjct: 586 KAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNS---- 641

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                   ++ +Y++ G L  +  I + +    S   W  ++AA
Sbjct: 642 --------LITMYAKCGDLNSSNYIFDGLG-NKSPITWNAMVAA 676


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 301/876 (34%), Positives = 483/876 (55%), Gaps = 57/876 (6%)

Query: 14  QTKQPP---KSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR 70
           QT+ PP   K   SP  SK        SP R+   +   L    R +  +EA++ ++ + 
Sbjct: 27  QTQPPPSIQKPTASPLTSKTPPK--PTSPSRSTASWVDALRSRTRSNDFREAISTYIEMT 84

Query: 71  RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNV 129
             G         +VLK    L D   G Q+H   VK G+ +  V V+ +LV++Y +   +
Sbjct: 85  VSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGI 144

Query: 130 EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL 189
            D  +VFD + + + VSW S ++   R +  ++ LE F  MQ+E ++ +SFT  +V    
Sbjct: 145 GDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALAC 204

Query: 190 ADEGI---VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI 246
           ++ G+   +    Q+H   ++ G +  T   NAL++MY K   V D++A+F+   DRD +
Sbjct: 205 SNLGVMHGLRLGKQLHGYSLRVGDQK-TFTNNALMAMYAKLGRVDDSKALFESFVDRDMV 263

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           +WN+M++ +  ++   EA   F  M L G EL   T  SV+  C+  + L + +++H+ V
Sbjct: 264 SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYV 323

Query: 307 LKNGIDFDHN--IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           L+N  D   N  + + L+  Y  C ++E   ++F  +   + +  W AMISG+ +NG  +
Sbjct: 324 LRNN-DLIENSFVGSALVDMYCNCRQVESGRRVFDHILG-RRIELWNAMISGYARNGLDE 381

Query: 365 LAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTAL 419
            A+  F +M +  G+ PN  T + ++ A      F     +H + +K  +++   V  AL
Sbjct: 382 KALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNAL 441

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL--------- 470
           ++ Y + G +D +  +F+ ++ +D V+W+ M+ GY   G    A+ +  ++         
Sbjct: 442 MDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDV 501

Query: 471 --------TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
                        KPN  T  +V+  C A  AA+ +GK+ HA +I+  L + + V SALV
Sbjct: 502 KKDDNDDEKGGPYKPNAITLMTVLPGCAA-LAAIAKGKEIHAYAIRNMLASDITVGSALV 560

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM-----RRQDL 577
            MY+K G +  +  VF     +++++WN +I     HG  ++ALE+FK M     R  + 
Sbjct: 561 DMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEA 620

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + + +TFI V  AC+H+GL+ EG   F  M ++H + PT +HY+C+VDL  RAG LE+A 
Sbjct: 621 KPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAY 680

Query: 638 DIINRMPFAASAT-VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
           +++N MP        W ++L ACR              L+ L+P+ ++ YVLLSN+Y++ 
Sbjct: 681 ELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSA 740

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G W +   VRK M    VKKE G SWIE +++ + F+AGD+SHPQS Q++  LE LS ++
Sbjct: 741 GLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKM 800

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           +  GY PDTS VL ++D++ KE +L  HSE+LAIAFG++ TP G  +++ KNLRVC DCH
Sbjct: 801 RKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCH 860

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              K ISK+  R+I+VRD  RFHHFKEG CSCGDYW
Sbjct: 861 AATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 283/764 (37%), Positives = 444/764 (58%), Gaps = 28/764 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            +Q+H   +  G A+DV + T LV LY    ++      F  +   N+ SW S++S Y R
Sbjct: 67  AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVR 126

Query: 157 -NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
             +  D +  +   + + G++P+ +TF  VL        +A   ++H  V+K G E    
Sbjct: 127 RGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS---LADGEKMHCWVLKMGFEHDVY 183

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V  +LI +Y +   V  A  VF  M  RD  +WN+M++G+  N    EA    + M    
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEE 243

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            ++   T  S++ +CA + ++     +H  V+K+G++ D  +   L+  YSK G+++DA 
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQ 303

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F  M E++D+VSW ++I+ + QN     A+ FF +M   G+RP+  T   + +    +
Sbjct: 304 RVFDGM-EVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQL 362

Query: 396 SPFQ----VHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           S  +    VH  +++  + E    +G AL+N Y K G +D A  VFE +  +D+++W+ +
Sbjct: 363 SDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTL 422

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEG--VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           + GYAQ G    A+  Y  +  EG  + PN+ T+ S++ A  +   A++QG + H   IK
Sbjct: 423 ITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPA-YSHVGALQQGMKIHGRLIK 480

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L   + V++ L+ MY K G +E A  +F    +   V WN++I     HGH +KAL++
Sbjct: 481 NCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQL 540

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           FK+MR   ++ D ITF+ +++AC+H+GLVDE Q  FD M  E+ I P ++HY CMVDL+ 
Sbjct: 541 FKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFG 600

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG LEKA ++++ MP  A A++W T+LAACR              L+ +   +   YVL
Sbjct: 601 RAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVL 660

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA  G W+   +VR L  DR ++K  G+S + V +    F AG+ SHPQ  +IY +
Sbjct: 661 LSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEE 720

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L  L+ ++K  GY PD S+VLQD++++ KE IL+ HSERLAI FG+++TP  +P++I KN
Sbjct: 721 LRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKN 780

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCH   K ISK+  R+I+VRD+NRFHHFK+G+CSCGDYW
Sbjct: 781 LRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/538 (29%), Positives = 270/538 (50%), Gaps = 14/538 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGCLFD 93
           F    ++N   +N ++  Y R   ++++++    +  L G+     T   VLK C  L D
Sbjct: 106 FKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD 165

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G ++HC  +K GF  DV V+ SL+ LY R   VE   +VF DM   +V SW +++SG
Sbjct: 166 ---GEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISG 222

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +N      L +  RM+ E +K ++ T S++L + A    V   V VH  VIK+G E  
Sbjct: 223 FCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESD 282

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V NALI+MY K   ++DA+ VFDGME RD ++WNS++A Y  N+  + A   F  M  
Sbjct: 283 VFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLF 342

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKME 332
            G      T VS+  +     + R+ R +H  V++   ++ D  I   L+  Y+K G ++
Sbjct: 343 VGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSID 402

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILT 390
            A  +F  +   +DV+SW  +I+G+ QNG    A++ +  M  EG  + PN  T+  IL 
Sbjct: 403 CARAVFEQLPS-RDVISWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILP 460

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   V   Q    +H  +IK        V T L++ Y K G L++A  +F  I ++  V 
Sbjct: 461 AYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP 520

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+A+++     G  E A+++++ + ++GVK +  TF S+++AC+      E    F    
Sbjct: 521 WNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQ 580

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
            + ++   L     +V ++ + G +E A  +      + D   W +++     HG+ +
Sbjct: 581 KEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAE 638



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 253/494 (51%), Gaps = 19/494 (3%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +  A Q+H +++  G      +   L+++Y     +  +   F  ++ ++  +WNSMV+ 
Sbjct: 64  INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123

Query: 255 YVTNELHMEAFETFNN-MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           YV    + ++ +     + L+G      TF  V+K C +  +     ++H  VLK G + 
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEH 180

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  +   L+  YS+ G +E A K+F  M  ++DV SW AMISG  QNG +  A+    +M
Sbjct: 181 DVYVAASLIHLYSRFGAVEVAHKVFVDM-PVRDVGSWNAMISGFCQNGNVAEALRVLDRM 239

Query: 374 TREGVRPNGFTYSIILT----AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             E V+ +  T S +L     +   V    VH ++IK   E    V  AL+N Y K G L
Sbjct: 240 KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRL 299

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            +A +VF+ ++ +D+V+W++++A Y Q  D   A+  ++++   G++P+  T  S+ +  
Sbjct: 300 QDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIF 359

Query: 490 TAPSAAVEQGKQFHACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
              S     G+  H   ++ + L   + + +ALV MY+K G+I+ A  VF++   RD++S
Sbjct: 360 GQLSDR-RIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVIS 418

Query: 549 WNSMICGYAQHGHTKKALEVFKEMR--RQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           WN++I GYAQ+G   +A++ +  M   R  +   G T++ ++ A +H G + +G +    
Sbjct: 419 WNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQG-TWVSILPAYSHVGALQQGMKIHGR 477

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQP 666
           ++ ++ ++  +   +C++D+Y + G LE AM +   +P   S   W  ++++   + +  
Sbjct: 478 LI-KNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISS---LGIHG 532

Query: 667 HDSAIYVLLSNMYA 680
           H      L  +M A
Sbjct: 533 HGEKALQLFKDMRA 546



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 191/365 (52%), Gaps = 9/365 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
             +F   P R+   +N ++  +C++    EAL +   ++   + +   T+SS+L  C   
Sbjct: 202 HKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQS 261

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V G  VH   +K G   DV VS +L+++Y +   ++D +RVFD M   ++VSW S++
Sbjct: 262 NDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSII 321

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFT---FSTVLGVLADEGIVATAVQVHTMVIK- 207
           + Y +N      L  F  M   G++P+  T    +++ G L+D  I      VH  V++ 
Sbjct: 322 AAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRI---GRAVHGFVVRC 378

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              EV   + NAL++MY K   +  ARAVF+ +  RD I+WN+++ GY  N L  EA + 
Sbjct: 379 RWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDA 438

Query: 268 FNNMGLAGAEL-TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           +N M      +  + T+VS++   +    L+   ++H +++KN +  D  + T L+  Y 
Sbjct: 439 YNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYG 498

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG++EDA  +F  + + +  V W A+IS    +G  + A+  F  M  +GV+ +  T+ 
Sbjct: 499 KCGRLEDAMSLFYEIPQ-ETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFV 557

Query: 387 IILTA 391
            +L+A
Sbjct: 558 SLLSA 562



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 164/340 (48%), Gaps = 7/340 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +FD    R+ V +N ++  Y ++     AL  F  +  +G+     T+ S+    G L
Sbjct: 303 QRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQL 362

Query: 92  FDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            D   GR VH   V+  +   D+ +  +LV++Y +  +++  R VF+ +   +V+SW +L
Sbjct: 363 SDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTL 422

Query: 151 LSGYARNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++GYA+N +    ++ ++ M+ EG  I PN  T+ ++L   +  G +   +++H  +IKN
Sbjct: 423 ITGYAQNGLASEAIDAYNMME-EGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKN 481

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
              +   V   LI MY K   + DA ++F  +    S+ WN++++    +    +A + F
Sbjct: 482 CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLF 541

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-TGLMV-AYS 326
            +M   G +    TFVS++  C+ +  +  A Q     ++       N++  G MV  + 
Sbjct: 542 KDMRADGVKADHITFVSLLSACSHSGLVDEA-QWCFDTMQKEYRIKPNLKHYGCMVDLFG 600

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           + G +E A  + S M    D   W  +++    +G  +L 
Sbjct: 601 RAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELG 640



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 9/164 (5%)

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           F+ V  +CT  + A    KQ HA  +       + + + LVT+Y+  G++  +S  FK  
Sbjct: 54  FNLVFRSCTNINVA----KQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHI 109

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKE-MRRQDLEFDGITFIGVITACTHAGLVDEG 600
           +++++ SWNSM+  Y + G  + +++   E +    +  D  TF  V+ AC      ++ 
Sbjct: 110 QRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKM 169

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             +   M  EH +Y      + ++ LYSR G +E A  +   MP
Sbjct: 170 HCWVLKMGFEHDVYVA----ASLIHLYSRFGAVEVAHKVFVDMP 209


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 307/830 (36%), Positives = 469/830 (56%), Gaps = 35/830 (4%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF--DHVFGR 98
           +N V +N ++  Y +    + A  +F  ++  G      T  S++ T   L   D     
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+ C   KSG   D+ V + LV  + ++ ++   R+VF+ M   N V+   L+ G  R K
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288

Query: 159 MNDRVLELFHRMQ-VEGIKPNSFTF---STVLGVLADEGIVATAVQVHTMVIKNG-GEVV 213
             +   +LF  M  +  + P S+     S     LA+E  +    +VH  VI  G  + +
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + N L++MY K   + DAR VF  M D+DS++WNSM+ G   N   +EA E + +M  
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   T +S +  CA+ K  +L +Q+H + LK GID + ++   LM  Y++ G + +
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNE 468

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDL--AVNFFCQMTREGVRPNGFTYSIILTA 391
             KIFS M E  D VSW ++I G L      L  AV  F    R G + N  T+S +L+A
Sbjct: 469 CRKIFSSMPE-HDQVSWNSII-GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526

Query: 392 QPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVA 446
             ++S      Q+H   +K N     +   AL+  Y K G +D   K+F  + + +D V 
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W++M++GY        A+ +   +   G + + F +++V++A  A  A +E+G + HACS
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA-FASVATLERGMEVHACS 645

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           ++A L + + V SALV MYSK G ++ A   F     R+  SWNSMI GYA+HG  ++AL
Sbjct: 646 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 705

Query: 567 EVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           ++F+ M+       D +TF+GV++AC+HAGL++EG ++F+ M + + + P +EH+SCM D
Sbjct: 706 KLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMAD 765

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----------------RLISLQPHDS 669
           +  RAG L+K  D I +MP   +  +WRTVL AC                 L  L+P ++
Sbjct: 766 VLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENA 825

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             YVLL NMYAA G W++  + RK M D  VKKEAGYSW+ +K+  + F+AGD SHP ++
Sbjct: 826 VNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDAD 885

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA-P 788
            IY KL+EL+ +++DAGY P T + L D++ E+KE ILS HSE+LA+AF L A  +   P
Sbjct: 886 VIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLP 945

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++I+KNLRVCGDCH+  K ISK+E R I++RD+NRFHHF++G CSC D+W
Sbjct: 946 IRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 186/648 (28%), Positives = 316/648 (48%), Gaps = 30/648 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P RN V +  ++  Y R+  H+EAL     + + G+        SVL+ C  +
Sbjct: 56  RKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEI 115

Query: 92  --FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR-TNNVEDGRRVFDDMNESNVVSWT 148
                +FGRQ+H    K  +A D  VS  L+ +Y +   +V      F D+   N VSW 
Sbjct: 116 GSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWN 175

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD--EGIVATAVQVHTMVI 206
           S++S Y++         +F  MQ +G +P  +TF +++       E  V    Q+   + 
Sbjct: 176 SIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ 235

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K+G      V + L+S + KS  +  AR VF+ ME R+++T N ++ G V  +   EA +
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295

Query: 267 TFNNMGLAGAELTRSTFVSVIK-----LCATTKELRLARQLHSQVLKNG-IDFDHNIRTG 320
            F +M  +  +++  ++V ++        A    L+  R++H  V+  G +DF   I  G
Sbjct: 296 LFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG + DA ++F  M + KD VSW +MI+G  QNG    AV  +  M R  + P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413

Query: 381 NGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             FT    L++  ++       Q+H   +K   + + SV  AL+  Y + G L+E  K+F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDT-EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
             + E D V+W++++   A+   +   AV  +      G K N  TFSSV++A ++ S  
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMIC 554
            E GKQ H  ++K  + +     +AL+  Y K G ++   ++F R   +RD V+WNSMI 
Sbjct: 534 -ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY  +    KAL++   M +     D   +  V++A      ++ G +     V+   + 
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME-----VHACSVR 647

Query: 615 PTMEH----YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
             +E      S +VD+YS+ G L+ A+   N MP   S + W ++++ 
Sbjct: 648 ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISG 694



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 162/578 (28%), Positives = 289/578 (50%), Gaps = 22/578 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R  H    K+   +DV +  +L++ Y+ T +    R+VFD+M   N VSW  ++SGY+RN
Sbjct: 21  RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT--AVQVHTMVIKNGGEVVTS 215
             +   L     M  EGI  N + F +VL    + G V      Q+H ++ K    V   
Sbjct: 81  GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140

Query: 216 VCNALISMYLKS-KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           V N LISMY K    V  A   F  +E ++S++WNS+++ Y        AF  F++M   
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200

Query: 275 GAELTRSTFVSVIKL-CATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           G+  T  TF S++   C+ T+ ++RL  Q+   + K+G+  D  + +GL+ A++K G + 
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTA 391
            A K+F+ M E ++ V+   ++ G ++    + A   F  M     V P   +Y I+L++
Sbjct: 261 YARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSS 317

Query: 392 QPAVS---------PFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
            P  S           +VH H+I T   +    +G  L+N Y K G + +A +VF  + +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           KD V+W++M+ G  Q G    AV+ Y+ +    + P  FT  S +++C +   A + G+Q
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA-KLGQQ 436

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H  S+K  ++  + VS+AL+T+Y++ G +    ++F    + D VSWNS+I   A+   
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496

Query: 562 T-KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
           +  +A+  F   +R   + + ITF  V++A +     + G+Q   + + +++I       
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL-KNNIADEATTE 555

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           + ++  Y + G ++    I +RM        W ++++ 
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 2/166 (1%)

Query: 32  QSLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +F R + +R+ V +N ++  Y  + L  +AL+L   + + G  L     ++VL     
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +     G +VH   V++    DV V ++LVD+Y +   ++   R F+ M   N  SW S+
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691

Query: 151 LSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIV 195
           +SGYAR+   +  L+LF  M+++G   P+  TF  VL   +  G++
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 283/864 (32%), Positives = 464/864 (53%), Gaps = 96/864 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+  +RN   +  ++  YC    ++E + LF  +   G+         V K C  L +
Sbjct: 146 MFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKN 205

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           +  G+ V+   +  GF  +  V  S++D++++   ++  RR F+++   +V  W  ++SG
Sbjct: 206 YRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSG 265

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y       + L+    M++ G+KP+  T+                               
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTW------------------------------- 294

Query: 214 TSVCNALISMYLKSKMVRDARAVF---DGMED--RDSITWNSMVAGYVTNELHMEAFETF 268
               NA+IS Y +S    +A   F    G++D   + ++W +++AG   N    EA   F
Sbjct: 295 ----NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVF 350

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSK 327
             M L G +    T  S +  C     LR  R++H   +K   +D D  +   L+  Y+K
Sbjct: 351 RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 410

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           C  +E A + F M+++  D+VSW AM++G+   G+ + A+    +M  +G+ P+  T++ 
Sbjct: 411 CRSVEVARRKFGMIKQ-TDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469

Query: 388 ILTA-------QPAVSPFQ--------------------------------VHAHIIKTN 408
           ++T        + A+  FQ                                +H ++++ +
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH 529

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
            E S  VG+AL++ Y     L+ A  VF  +  +D+V W+++++  AQ G +  A+ + R
Sbjct: 530 IELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLR 589

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           ++    V+ N  T  S + AC+   AA+ QGK+ H   I+  L+    + ++L+ MY + 
Sbjct: 590 EMNLSNVEVNTVTMVSALPACSKL-AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRC 648

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G+I+ +  +F    +RDLVSWN MI  Y  HG    A+ +F++ R   L+ + ITF  ++
Sbjct: 649 GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLL 708

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
           +AC+H+GL++EG +YF +M  E+ + P +E Y+CMVDL SRAG   + ++ I +MPF  +
Sbjct: 709 SACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 768

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A VW ++L ACR              L  L+P  S  YVL++N+Y+A G W++ A++R L
Sbjct: 769 AAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCL 828

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M +R V K  G SWIEVK K +SF+ GD SHP   QI +K+E L   +K+ GY PDT++V
Sbjct: 829 MKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFV 888

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           LQD+D++ KE  L  HSE++A+AFGL++T AG PL+I+KNLRVCGDCH+  K ISK+E+R
Sbjct: 889 LQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKR 948

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           DI++RD  RFHHF +G+CSCGDYW
Sbjct: 949 DIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 296/607 (48%), Gaps = 81/607 (13%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +S+L+ C  L++   G QVH + V +G      + + L+++Y +T  VED RR+FD M+E
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            NV SWT+++  Y      +  ++LF+ M  EG++P+ F F  V    ++         V
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           +  ++  G E  + V  +++ M++K   +  AR  F+ +E +D   WN MV+GY +    
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +A +  ++M L+G +  + T+ ++I                                  
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIIS--------------------------------- 299

Query: 322 MVAYSKCGKMEDASKIFSMMREMKD----VVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              Y++ G+ E+ASK F  M  +KD    VVSWTA+I+G  QNG    A++ F +M  EG
Sbjct: 300 --GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEA 432
           V+PN  T +  ++A   +S      ++H + IK    +    VG +L++ Y K   ++ A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 433 AKVFELIDEKDIVAWSAMLAGYA-----------------------------------QI 457
            + F +I + D+V+W+AMLAGYA                                   Q 
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           GD + A++ ++++ S G+ PN  T S  + AC      ++ GK+ H   ++  +  +  V
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAAC-GQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            SAL++MYS   ++E A  VF     RD+V WNS+I   AQ G +  AL++ +EM   ++
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           E + +T +  + AC+    + +G++    ++    +       + ++D+Y R G ++K+ 
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFII-RCGLDTCNFILNSLIDMYGRCGSIQKSR 655

Query: 638 DIINRMP 644
            I + MP
Sbjct: 656 RIFDLMP 662



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 235/500 (47%), Gaps = 74/500 (14%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH  ++ NG +V   + + L+ +Y ++  V DAR +FD M +R+  +W +++  Y    
Sbjct: 110 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            + E  + F  M   G       F  V K C+  K  R+ + ++  +L  G + +  ++ 
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            ++  + KCG+M+ A + F  + E KDV  W  M+SG+   G    A+     M   GV+
Sbjct: 230 SILDMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVK 288

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-EL 438
           P+  T++                               A+++ Y + G  +EA+K F E+
Sbjct: 289 PDQVTWN-------------------------------AIISGYAQSGQFEEASKYFLEM 317

Query: 439 IDEKD----IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
              KD    +V+W+A++AG  Q G    A+ ++R++  EGVKPN  T +S ++ACT  S 
Sbjct: 318 GGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSL 377

Query: 495 AVEQGKQFHACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            +  G++ H   IK + L++ L V ++LV  Y+K  ++E A   F   ++ DLVSWN+M+
Sbjct: 378 -LRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM------ 607
            GYA  G  ++A+E+  EM+ Q +E D IT+ G++T  T  G      ++F  M      
Sbjct: 437 AGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMD 496

Query: 608 ----------------------------VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
                                       V  +HI  +    S ++ +YS    LE A  +
Sbjct: 497 PNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV 556

Query: 640 INRMPFAASATVWRTVLAAC 659
            + +       VW ++++AC
Sbjct: 557 FSELS-TRDVVVWNSIISAC 575



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 138/278 (49%), Gaps = 4/278 (1%)

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           FQVHA ++    +    +G+ LL  Y + G +++A ++F+ + E+++ +W+A++  Y  +
Sbjct: 109 FQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGL 168

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           GD E  +K++  + +EGV+P+ F F  V  AC+        GK  +   +        CV
Sbjct: 169 GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK-NYRVGKDVYDYMLSIGFEGNSCV 227

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
             +++ M+ K G ++ A   F+    +D+  WN M+ GY   G  KKAL+   +M+   +
Sbjct: 228 KGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D +T+  +I+    +G  +E  +YF  M       P +  ++ ++    + G   +A+
Sbjct: 288 KPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEAL 347

Query: 638 DIINRMPFAA---SATVWRTVLAACRLISLQPHDSAIY 672
            +  +M       ++    + ++AC  +SL  H   I+
Sbjct: 348 SVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 82/173 (47%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F     R+ V +N ++    +      AL+L   +    + +   T+ S L  C  L 
Sbjct: 555 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 614

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+++H   ++ G      +  SL+D+Y R  +++  RR+FD M + ++VSW  ++S
Sbjct: 615 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 674

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
            Y  +      + LF + +  G+KPN  TF+ +L   +  G++    +   M+
Sbjct: 675 VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + +FD  PQR+ V +N ++  Y       +A+NLF   R +GL     T +++L  C
Sbjct: 652 QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSAC 711

Query: 89  --GCLFDHVFGRQVHCECVKSGFARDVNVS--TSLVDLYMRTNNVEDGRRVFDDMN-ESN 143
               L +  +    + + +K+ +A D  V     +VDL  R     +     + M  E N
Sbjct: 712 SHSGLIEEGWK---YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 768

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
              W SLL G  R   N  + E   R   E ++P S
Sbjct: 769 AAVWGSLL-GACRIHCNPDLAEYAARYLFE-LEPQS 802


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/700 (38%), Positives = 411/700 (58%), Gaps = 21/700 (3%)

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N +++ ++ L +R+Q  G+  +SF +  VL     +  +  A QVH  +IK+  E    V
Sbjct: 7   NTLSEAIVVLMNRLQ-RGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHV 65

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N L+ +Y++   +++AR VFD +  +   +WN+M+AGYV ++   +A   F  M   G 
Sbjct: 66  MNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV 125

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    T++ ++K CA+   L+  +++H+ +   G++ D  + T L+  Y KCG + +A +
Sbjct: 126 QPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARR 185

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           IF  +    D++SWT MI  + Q+G    A     QM +EG +PN  TY  IL A  +  
Sbjct: 186 IFDNLMN-HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             +    VH H +    E    VGTAL+  Y K G +D+A  VF+ +  +D+V+W+ M+ 
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            +A+ G    A  ++ Q+ +EG KP+   F S++NAC A + A+E  K+ H  ++ + L 
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNAC-ASAGALEWVKKIHRHALDSGLE 363

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             + V +ALV MYSK G+I+ A  VF R + R++VSWN+MI G AQHG  + ALEVF+ M
Sbjct: 364 VDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRM 423

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
               ++ D +TF+ V++AC+HAGLVDEG+  +  M   + I P + H +CMVDL  RAG 
Sbjct: 424 TAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGR 483

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNM 678
           L +A   I+ M        W  +L +CR               + L P ++A YVLLSN+
Sbjct: 484 LMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNI 543

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           YA  G W   + VR +M +R ++KE G SWIEV NK + FL  D SHP+  +I    +++
Sbjct: 544 YAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKV 603

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
             ++K  GY PDT  VL++ + + KE  +  HSE+LAI +GL+ TP G P+++ KNLRVC
Sbjct: 604 IEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVC 663

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            DCH   KLISK+E R+I+VRD NRFHHFK+G+CSCGDYW
Sbjct: 664 TDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 263/521 (50%), Gaps = 6/521 (1%)

Query: 61  EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLV 120
           EA+ + +   + GL         VLK C    D +  +QVH   +KS   ++ +V  +L+
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70

Query: 121 DLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
            +Y+    +++ R VFD + + +  SW ++++GY  +K  +  + LF  M  EG++PN+ 
Sbjct: 71  HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           T+  +L   A    +    +VH  +   G E    V  AL+ MY K   + +AR +FD +
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            + D I+W  M+  Y  +    EA+     M   G +    T+VS++  CA+   L+  +
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H   L  G++ D  + T L+  Y+K G ++DA  +F  M+ ++DVVSW  MI    ++
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMK-VRDVVSWNVMIGAFAEH 309

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVG 416
           G    A + F QM  EG +P+   +  IL A  +    +    +H H + +  E    VG
Sbjct: 310 GRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVG 369

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           TAL++ Y K G +D+A  VF+ +  +++V+W+AM++G AQ G  + A++++R++T+ GVK
Sbjct: 370 TALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVK 429

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+  TF +V++AC+      E   Q+ A +    +   +   + +V +  + G +  A  
Sbjct: 430 PDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKL 489

Query: 537 VFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
                    D  +W +++     +G+ +    V KE  + D
Sbjct: 490 FIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLD 530



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 194/360 (53%), Gaps = 1/360 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +++   +N ++  Y      ++A+ LF  +   G+     T   +LK C  L
Sbjct: 83  RCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASL 142

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +G++VH      G   DV V T+L+ +Y +  ++ + RR+FD++   +++SWT ++
Sbjct: 143 SALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMI 202

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             YA++        L  +M+ EG KPN+ T+ ++L   A EG +    +VH   +  G E
Sbjct: 203 GAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE 262

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V  AL+ MY KS  + DAR VFD M+ RD ++WN M+  +  +    EA++ F  M
Sbjct: 263 LDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQM 322

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +     F+S++  CA+   L   +++H   L +G++ D  + T L+  YSK G +
Sbjct: 323 QTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSI 382

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA  +F  M+ +++VVSW AMISG  Q+G    A+  F +MT  GV+P+  T+  +L+A
Sbjct: 383 DDARVVFDRMK-VRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSA 441



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 2/222 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR   R+ V +N ++  +       EA +LFL ++  G         S+L  C     
Sbjct: 287 VFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGA 346

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             + +++H   + SG   DV V T+LV +Y ++ +++D R VFD M   NVVSW +++SG
Sbjct: 347 LEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISG 406

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA-VQVHTMVIKNGGEV 212
            A++ +    LE+F RM   G+KP+  TF  VL   +  G+V     Q   M    G E 
Sbjct: 407 LAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEP 466

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
             S CN ++ +  ++  + +A+   D M  D D  TW +++ 
Sbjct: 467 DVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLG 508



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 7/180 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--GCL 91
           +FDR   RN V +N ++    +  L Q+AL +F  +   G+     T  +VL  C    L
Sbjct: 388 VFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGL 447

Query: 92  FDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSWTS 149
            D   GR  +    +  G   DV+    +VDL  R   + + +   D+M  + +  +W +
Sbjct: 448 VDE--GRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGA 505

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           LL G  R   N  + EL  + +++    N+ T+  +  + A+ G       V TM+ + G
Sbjct: 506 LL-GSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERG 564


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/776 (36%), Positives = 440/776 (56%), Gaps = 24/776 (3%)

Query: 84   VLKTCGCLFDHVFGRQVHCECVKSG-FAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
            +L+ C    D   GR VH   V+SG  AR D+  +  L+++Y +        RVFD + E
Sbjct: 434  LLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPE 493

Query: 142  SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
             N+VS+ +L+ G+A     +    LF R++ EG + N F  +TVL ++     +  A  V
Sbjct: 494  RNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGV 553

Query: 202  HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
            H    K G +    V +ALI  Y    +V DAR VFDG+  +D++ W +MV+ Y  N+  
Sbjct: 554  HACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCP 613

Query: 262  MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
                + F+ M +A ++L      SV++       + L + +H+  +K   D + ++   L
Sbjct: 614  ENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGAL 673

Query: 322  MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
            +  Y+KCG +EDA   F M+    DV+ W+ MIS + Q    + A   F +M R  V PN
Sbjct: 674  LDMYAKCGNIEDARLAFEMVTN-DDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPN 732

Query: 382  GFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             F+ S +L A  A  P      Q+H H IK  +E    VG AL++ Y K   ++ + ++F
Sbjct: 733  EFSLSSVLQAC-ANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIF 791

Query: 437  ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
              + + + V+W+ ++ GY++ G  E A+ ++R++ +  V   + T+SSV+ AC A +A++
Sbjct: 792  SSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRAC-ASTASI 850

Query: 497  EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
                Q H    K+  N+   VS++L+  Y+K G I  A E+F+  ++ DLVSWN++I GY
Sbjct: 851  NHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGY 910

Query: 557  AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
            A HG    A E+F  M +  ++ + ITF+ +++ C   GLV +G   FD M  +H I P+
Sbjct: 911  AVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPS 970

Query: 617  MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLI 662
            MEHY+C+V L  RAG L  A++ I  +P A SA VWR +L++C              +++
Sbjct: 971  MEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVL 1030

Query: 663  SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
             ++P D   YVLLSNMY+A G   + A  RK M +  V+KE G SW+E+K + ++F  G 
Sbjct: 1031 EIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGS 1090

Query: 723  ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
              HP    I + LE L+ +    GY PDT  VL D+++E K  +L  HSERLA+A+GLV 
Sbjct: 1091 EDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVM 1150

Query: 783  TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            TP G P++I+KNLR C DCH + K+ISK+ +++I+VRD NRFHHF+EG CSCGDYW
Sbjct: 1151 TPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 242/479 (50%), Gaps = 8/479 (1%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           PF S     +FD  P+RN V +  L+  +      +EA  LF  +R  G  +    L++V
Sbjct: 480 PFGSA--HRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTV 537

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           LK    +        VH    K G  R+  V ++L+D Y     V D RRVFD +   + 
Sbjct: 538 LKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDA 597

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           V+WT+++S Y+ N   +  L++F +M+V   K N F  ++VL        V     +H  
Sbjct: 598 VAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHAC 657

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            +K   +    V  AL+ MY K   + DAR  F+ + + D I W+ M++ Y     + +A
Sbjct: 658 SVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQA 717

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
           FE F  M  +       +  SV++ CA    L L +Q+H+  +K G + +  +   L+  
Sbjct: 718 FELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDL 777

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y+KC  ME + +IFS +R++ + VSW  +I G+ ++G  + A++ F +M    V     T
Sbjct: 778 YAKCSDMESSLEIFSSLRDVNE-VSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVT 836

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           YS +L A  + +      QVH  I K+ +     V  +L+++Y K G + +A ++FE + 
Sbjct: 837 YSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLK 896

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           E D+V+W+A+++GYA  G    A +++  ++   +K N+ TF ++++ C + +  V QG
Sbjct: 897 ECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGS-TGLVSQG 954



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 166/333 (49%), Gaps = 1/333 (0%)

Query: 35   FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
            F+     + + ++ ++  Y + + +++A  LF+ + R  +     +LSSVL+ C  +   
Sbjct: 690  FEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLL 749

Query: 95   VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
              G+Q+H   +K G   ++ V  +L+DLY + +++E    +F  + + N VSW +++ GY
Sbjct: 750  DLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGY 809

Query: 155  ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +++   +  L +F  M+   +     T+S+VL   A    +    QVH ++ K+     T
Sbjct: 810  SKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDT 869

Query: 215  SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
             V N+LI  Y K   +RDAR +F+ +++ D ++WN++++GY  +     A E F+ M   
Sbjct: 870  IVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKN 929

Query: 275  GAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    TFV+++ +C +T  +     L  S  L +GI+      T ++    + G++ D
Sbjct: 930  SIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLND 989

Query: 334  ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            A      +      + W A++S  + +  ++L 
Sbjct: 990  ALNFIGDIPSAPSAMVWRALLSSCIVHKNVELG 1022


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/761 (36%), Positives = 443/761 (58%), Gaps = 29/761 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQ+H + +    + +V +   +V  Y +  +V   R  FD +   N  SW S+L+ YA+N
Sbjct: 44  RQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQN 102

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 L+L+ RM    ++PN   ++TVLG  A    +     +H+ +    G  +  + 
Sbjct: 103 GHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVIL 159

Query: 218 -NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+L++MY K   + DA+ +F+ M  R   +WN+M+A Y  +    EA   + +M +   
Sbjct: 160 ENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDV--- 216

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E +  TF SV+  C+    L   R++H+ +   G + D +++  L+  Y++C  ++DA+K
Sbjct: 217 EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAK 276

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           IF  +   +DVVSW+AMI+   +    D A+ F+ +M  EGVRPN +T++ +L A  +V 
Sbjct: 277 IFQRL-PRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 335

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             +    VH  I+   Y+ +   GTAL++ Y   G LDEA  +F+ I+ +D   W+ ++ 
Sbjct: 336 DLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIG 395

Query: 453 GYAQIGDTEGAVKIYRQL-TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           GY++ G   G +++YR++  +  V   +  +S VI+AC A   A    +Q H+      +
Sbjct: 396 GYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISAC-ASLGAFADARQAHSDIEADGM 454

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            +   ++++LV MYS+ GN+ESA +VF +   RD ++W ++I GYA+HG    AL ++KE
Sbjct: 455 ISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKE 514

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M  +  E   +TF+ V+ AC+HAGL ++G+Q F  + +++ ++P + HYSC++DL SRAG
Sbjct: 515 MELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAG 574

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
            L  A ++IN MP   +   W ++L A R+                L P D A YVLLSN
Sbjct: 575 RLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSN 634

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           ++A TG+    A VR  M  R VKK  G SWIEV ++ + F  GD SHP+  +I+++L+ 
Sbjct: 635 VHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQR 694

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           LS ++K+AGY P++  VL D+ ++ KE +L  HSE+LAIAFGL+AT  G  L+I   LR+
Sbjct: 695 LSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRI 754

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH+ +K IS + RR+I+VRD++RFH F++G CSCGDYW
Sbjct: 755 CHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 231/473 (48%), Gaps = 12/473 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF+R   R+   +N ++  Y +    +EA+ L+     + +     T +SVL  C  L
Sbjct: 177 KRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVEPSVRTFTSVLSACSNL 233

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR++H      G   D+++  +L+ +Y R   ++D  ++F  +   +VVSW++++
Sbjct: 234 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 293

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + +A   + D  +E + +MQ+EG++PN +TF++VL   A  G +     VH  ++ NG +
Sbjct: 294 AAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYK 353

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +      AL+ +Y     + +AR++FD +E+RD   W  ++ GY          E +  M
Sbjct: 354 ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREM 413

Query: 272 -GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
                   T+  +  VI  CA+      ARQ HS +  +G+  D  + T L+  YS+ G 
Sbjct: 414 KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGN 473

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A ++F  M   +D ++WT +I+G+ ++G   LA+  + +M  EG  P+  T+ ++L 
Sbjct: 474 LESARQVFDKMSS-RDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLY 532

Query: 391 AQPAVSPFQVHAHI---IKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKDI 444
           A       +    +   I+++Y    ++   + +++   + G L +A ++   +  E + 
Sbjct: 533 ACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPND 592

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAV 496
           V WS++L       D + A     Q+T  + V P  +   S ++A T   A +
Sbjct: 593 VTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGM 645


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 301/829 (36%), Positives = 466/829 (56%), Gaps = 54/829 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + LF+  P R+ V +N +L  Y      +EA++L       GL     TL       
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR------ 250

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L   + G       VKS FA   N ++S+ ++  R                       
Sbjct: 251 --LLARISGDDSDAGQVKS-FANG-NDASSVSEIIFRNKG-------------------- 286

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
             LS Y  +     +L+ F  M    ++ +  TF  +L        +A   QVH M +K 
Sbjct: 287 --LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +++ +V N+LI+MY K +    AR VFD M +RD I+WNS++AG   N L +EA   F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
             +   G +  + T  SV+K  ++  E L L++Q+H   +K     D  + T L+ AYS+
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
              M++A  +F   R   D+V+W AM++G+ Q+      +  F  M ++G R + FT + 
Sbjct: 465 NRCMKEAEILFE--RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +      +       QVHA+ IK+ Y+    V + +L+ YVK G +  A   F+ I   D
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            VAW+ M++G  + G+ E A  ++ Q+   GV P+EFT +++  A +  +A +EQG+Q H
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA-LEQGRQIH 641

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A ++K    N   V ++LV MY+K G+I+ A  +FKR    ++ +WN+M+ G AQHG  K
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGK 701

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           + L++FK+M+   ++ D +TFIGV++AC+H+GLV E  ++   M  ++ I P +EHYSC+
Sbjct: 702 ETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCL 761

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
            D   RAG++++A ++I  M   ASA+++RT+LAACR              L+ L+P DS
Sbjct: 762 ADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDS 821

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
           + YVLLSNMYAA   W E    R +M   KVKK+ G+SWIEVKNK + F+  D S+ Q+ 
Sbjct: 822 SAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTE 881

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            IY K++++   +K  GY P+T + L D+++E KE  L  HSE+LA+AFGL++TP   P+
Sbjct: 882 LIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPI 941

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +++KNLRVCGDCH  +K I+K+  R+IV+RD NRFH FK+G+CSCGDYW
Sbjct: 942 RVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 173/638 (27%), Positives = 300/638 (47%), Gaps = 53/638 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLH-----QEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +FD+ P R+ V +N +L  Y + S       Q+A  LF  +R+  +     TLS +LK C
Sbjct: 96  VFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC 155

Query: 89  GCLFDHVFGRQ-VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
                +V+  +  H    K G   D  V+ +LV++Y++   V++G+ +F++M   +VV W
Sbjct: 156 -LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
             +L  Y      +  ++L       G+ PN  T   +  +  D+   + A QV +    
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDD---SDAGQVKSFANG 271

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           N    V+ +                             I  N  ++ Y+ +  +    + 
Sbjct: 272 NDASSVSEI-----------------------------IFRNKGLSEYLHSGQYSALLKC 302

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F +M  +  E  + TF+ ++        L L +Q+H   LK G+D    +   L+  Y K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
             K   A  +F  M E +D++SW ++I+G  QNG    AV  F Q+ R G++P+ +T + 
Sbjct: 363 LRKFGFARTVFDNMSE-RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421

Query: 388 ILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           +L A  ++        QVH H IK N      V TAL++AY +   + EA  +FE     
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNF 480

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+VAW+AM+AGY Q  D    +K++  +  +G + ++FT ++V   C     A+ QGKQ 
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC-GFLFAINQGKQV 539

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           HA +IK+  +  L VSS ++ MY K G++ +A   F      D V+W +MI G  ++G  
Sbjct: 540 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEE 599

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-- 620
           ++A  VF +MR   +  D  T   +  A +    +++G+Q   I  N   +  T + +  
Sbjct: 600 ERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ---IHANALKLNCTNDPFVG 656

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           + +VD+Y++ G ++ A  +  R+    + T W  +L  
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVG 693



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 259/563 (46%), Gaps = 69/563 (12%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE-------LFHRM 170
           +L+ +Y +  ++   RRVFD M + ++VSW S+L+ YA++  ++ V+E       LF  +
Sbjct: 79  NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS--SECVVENIQQAFLLFRIL 136

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           + + +  +  T S +L +    G V  +   H    K G +    V  AL+++YLK   V
Sbjct: 137 RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKV 196

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE---TFNNMGLAGAELTRSTFVSVI 287
           ++ + +F+ M  RD + WN M+  Y+      EA +    F++ GL   E+T        
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT-------- 248

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
                   LRL  ++      +G D D     G + +++      DAS +        ++
Sbjct: 249 --------LRLLARI------SGDDSD----AGQVKSFANGN---DASSV-------SEI 280

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           +     +S +L +G     +  F  M    V  +  T+ ++L     V       QVH  
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
            +K   +   +V  +L+N Y K      A  VF+ + E+D+++W++++AG AQ G    A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           V ++ QL   G+KP+++T +SV+ A ++    +   KQ H  +IK    +   VS+AL+ 
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID 460

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
            YS+   ++ A  +F+R    DLV+WN+M+ GY Q     K L++F  M +Q    D  T
Sbjct: 461 AYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-------SCMVDLYSRAGMLEKA 636
              V   C     +++G+Q         H Y     Y       S ++D+Y + G +  A
Sbjct: 520 LATVFKTCGFLFAINQGKQV--------HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571

Query: 637 MDIINRMPFAASATVWRTVLAAC 659
               + +P       W T+++ C
Sbjct: 572 QFAFDSIP-VPDDVAWTTMISGC 593



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 205/459 (44%), Gaps = 47/459 (10%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN-----ELHMEAFETFNNMG 272
           N LISMY K   +  AR VFD M DRD ++WNS++A Y  +     E   +AF  F  + 
Sbjct: 78  NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                 +R T   ++KLC  +  +  +   H    K G+D D  +   L+  Y K GK++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +   +F  M   +DVV W  M+  +L+ G  + A++        G+ PN  T  ++    
Sbjct: 198 EGKVLFEEM-PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA--- 253

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 ++          KSF+ G             ++A+ V E+I        +  L+
Sbjct: 254 ------RISGDDSDAGQVKSFANG-------------NDASSVSEIIFR------NKGLS 288

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            Y   G     +K +  +    V+ ++ TF  ++ A      ++  G+Q H  ++K  L+
Sbjct: 289 EYLHSGQYSALLKCFADMVESDVECDQVTFILML-ATAVKVDSLALGQQVHCMALKLGLD 347

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             L VS++L+ MY K      A  VF    +RDL+SWNS+I G AQ+G   +A+ +F ++
Sbjct: 348 LMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL 407

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYF-DIMVNEHHIYPTMEHY--SCMVDLYSR 629
            R  L+ D  T   V+ A   A  + EG      + V+   I    + +  + ++D YSR
Sbjct: 408 LRCGLKPDQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHD 668
              +++A  +  R  F   A  W  ++A       Q HD
Sbjct: 465 NRCMKEAEILFERHNFDLVA--WNAMMAG----YTQSHD 497



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 43/320 (13%)

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
           T+ +L L +  H+++L    + +  +   L+  YSKCG +  A ++F  M + +D+VSW 
Sbjct: 51  TSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-RDLVSWN 109

Query: 352 AMISGHLQNGA-----IDLAVNFFCQMTREGVRPNGFTYS----IILTAQPAVSPFQVHA 402
           ++++ + Q+       I  A   F  + ++ V  +  T S    + L +    +    H 
Sbjct: 110 SILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHG 169

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           +  K   +    V  AL+N Y+K G + E   +FE +  +D+V W+ ML  Y ++G  E 
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ +     S G+ PNE T   +         A   G    A  +K+             
Sbjct: 230 AIDLSSAFHSSGLNPNEITLRLL---------ARISGDDSDAGQVKS------------- 267

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
             ++   +  S SE+  R         N  +  Y   G     L+ F +M   D+E D +
Sbjct: 268 --FANGNDASSVSEIIFR---------NKGLSEYLHSGQYSALLKCFADMVESDVECDQV 316

Query: 583 TFIGVITACTHAGLVDEGQQ 602
           TFI ++        +  GQQ
Sbjct: 317 TFILMLATAVKVDSLALGQQ 336


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 296/755 (39%), Positives = 438/755 (58%), Gaps = 37/755 (4%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           D  V+ SL+ +Y +  +V   RRVFD M    ++VSWT++     RN      L L   M
Sbjct: 78  DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137

Query: 171 QVEGIKPNSFTF-STVLGVLADEGIVATAVQVHTMVIKNG--GEVVTSVCNALISMYLKS 227
              G++PN+FT  +        E   ++   V    IK G  G  V+  C ALI M+ ++
Sbjct: 138 LESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGC-ALIDMFARN 196

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
             +  AR VF+G+ +R  + W  M+  YV      +A E F  M   G E    T  S++
Sbjct: 197 GDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMV 256

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG---KMEDASKIFSMMREM 344
             CA      L +QLHS VL+ G+  D  +  GL+  Y+K      ME A K+F  M   
Sbjct: 257 SACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRM-PT 315

Query: 345 KDVVSWTAMISGHLQ-NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQ 399
            +V+SWTA+ISG++Q  G  + AV   C+M  E + PN  TYS +L A   +S      Q
Sbjct: 316 HNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQ 375

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           +HA ++KT+      VG AL++ Y + G ++EA K F+ + E+++++ S+       IG+
Sbjct: 376 IHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSS------DIGE 429

Query: 460 TEGAVKIYR-QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
           T  +   +  Q+ S  V  + FTF+S+++A  A      +G+Q HA SIK    +   +S
Sbjct: 430 TGRSNASWSSQIESMDVGVSTFTFASLLSA-AATVGLPTKGQQLHALSIKTGFESDKGIS 488

Query: 519 SALVTMYSKKGNIESASEVF-KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           ++LV+MYS+ G ++ A   F + +   +++SW S+I   A+HGH ++AL +F +M    +
Sbjct: 489 NSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGV 548

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + + +T+I V++AC+H GLV EG++YF  M  +H + P MEHY+CMVDL +R+G++++A+
Sbjct: 549 KPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEAL 608

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
           + IN MP  A A VW+T+L ACR              +I L+P D A YVLLSN+YA  G
Sbjct: 609 EFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGG 668

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W E AR+R LM  R + KE G SW+ V N  + F AGD SHP++ +IY+KL  L   +K
Sbjct: 669 LWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIK 728

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
           D GY PDTS VL D+ D+ KE  L QHSE++A+AFGL+ T    P++I KNLRVC DCH+
Sbjct: 729 DIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHS 788

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IK ISK   R+I++RD+NRFH  K+G CSCG+YW
Sbjct: 789 AIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 29/438 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+   +R  V +  ++  Y +     +A+ LFLG+   G    G T+SS++  C   
Sbjct: 203 RKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQ 262

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR---TNNVEDGRRVFDDMNESNVVSWT 148
                G+Q+H   ++ G   D  VS  LVD+Y +     ++E  R+VF  M   NV+SWT
Sbjct: 263 GSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWT 322

Query: 149 SLLSGYAR-NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +L+SGY +     +  +EL   M  E I+PN  T+S++L   A+     +  Q+H  V+K
Sbjct: 323 ALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMK 382

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
                V  V NAL+SMY +S  + +AR  FD + +R+ ++ +S +    T   +      
Sbjct: 383 TSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIG--ETGRSNASWSSQ 440

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
             +M +    ++  TF S++   AT       +QLH+  +K G + D  I   L+  YS+
Sbjct: 441 IESMDVG---VSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSR 497

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG ++DA + F  M +  +V+SWT++IS   ++G  + A++ F  M   GV+PN  TY  
Sbjct: 498 CGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIA 557

Query: 388 ILTAQPAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDEAAK- 434
           +L+A         H  ++K   E   S+               +++   + G++ EA + 
Sbjct: 558 VLSACS-------HVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEF 610

Query: 435 VFELIDEKDIVAWSAMLA 452
           + E+  + D + W  +L 
Sbjct: 611 INEMPCKADALVWKTLLG 628



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 190/360 (52%), Gaps = 19/360 (5%)

Query: 298 LARQLHSQVLKNGI-DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           L R LH ++L   + D D  +   L+  YSKCG +  A ++F  MR ++D+VSWTAM   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--------VHAHIIKTN 408
             +NGA   A+    +M   G+RPN FT   +  A  A  P +        V    IKT 
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFT---LCAAAHACFPGELFRSSGGTVLGFAIKTG 177

Query: 409 YEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
           +  +  SVG AL++ + + G L  A KVF  + E+ +V W+ M+  Y Q G    AV+++
Sbjct: 178 FWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELF 237

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
             +  +G +P+ +T SS+++AC A   +   G+Q H+  ++  L +  CVS  LV MY+K
Sbjct: 238 LGMLEDGFEPDGYTMSSMVSAC-AEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTK 296

Query: 528 ---KGNIESASEVFKRQRKRDLVSWNSMICGYAQ-HGHTKKALEVFKEMRRQDLEFDGIT 583
              + ++E A +VFKR    +++SW ++I GY Q  G    A+E+  EM  + +E + +T
Sbjct: 297 LQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLT 356

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  ++ AC +    D G+Q     V +  I       + +V +Y+ +G +E+A    +++
Sbjct: 357 YSSLLKACANLSDQDSGRQ-IHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL 415


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 290/832 (34%), Positives = 469/832 (56%), Gaps = 34/832 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLF---GSTLSSVLKTCGC 90
           +F+ S ++N   +N LL  Y R+SL ++A+ +F  +  + L  F     TL  V+K C  
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVF--VEMISLTEFVPDNFTLPCVIKACVG 208

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           ++D   G  VH   +K+    DV V  +L+ +Y +   VE   +VFD M + N+VSW S+
Sbjct: 209 VYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSV 268

Query: 151 LSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +     N + +    LF  +    EG+ P+  T  TV+ + A +G V   +  H + +K 
Sbjct: 269 MYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKL 328

Query: 209 G--GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           G  GE+   V ++L+ MY K   + +AR +FD  E ++ I+WNSM+ GY  +     AFE
Sbjct: 329 GLCGEL--KVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFE 385

Query: 267 TFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVA 324
               M +    ++   T ++V+ +C    +    +++H   L++G I  D  +    +  
Sbjct: 386 LLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAG 445

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y+KCG +  A  +F  M E K V SW A+I GH+QNG    A++ +  M   G+ P+ FT
Sbjct: 446 YAKCGSLHYAEGVFCGM-ESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFT 504

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            + +L+A   +       ++H  +++  +E    +  +L++ YV+ G +  A   F+ ++
Sbjct: 505 IASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNME 564

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           EK++V W+ M+ G++Q      A+ ++ Q+ S  + P+E +    + AC+  SA +  GK
Sbjct: 565 EKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSA-LRLGK 623

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           + H  ++K+ L     V+ +L+ MY+K G +E +  +F R   +  V+WN +I GY  HG
Sbjct: 624 ELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHG 683

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
           H +KA+E+FK M+      D +TFI ++TAC HAGLV EG +Y   M +   I P +EHY
Sbjct: 684 HGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHY 743

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQP 666
           +C+VD+  RAG L +A++++N +P    + +W ++L++CR              L+ L P
Sbjct: 744 ACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGP 803

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
             +  YVL+SN YA  G W E  ++R+ M +  ++K+AG SWIE+  K   FL GD S  
Sbjct: 804 DKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLL 863

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           QS +I     EL  ++   GYKPDTS VL +++++ K  IL  HSE+LAI+FGL+ T  G
Sbjct: 864 QSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKG 923

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             L++ KNLR+C DCH  IKL+SK+++R+I+VRD  RFHHFK G CSCGDYW
Sbjct: 924 TTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 167/590 (28%), Positives = 286/590 (48%), Gaps = 25/590 (4%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           +L+ CG   +   GR++H     S  F  DV + T LV +Y   ++  D   VF+     
Sbjct: 99  LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158

Query: 143 NVVSWTSLLSGYARNKM-NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
           N+  W +LLSGY RN +  D V      + +    P++FT   V+        V     V
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +K        V NALI+MY K   V  A  VFD M  R+ ++WNS++   + N + 
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278

Query: 262 MEAFETFNNM--GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            E++  F  +  G  G     +T V+VI LCA   E+RL    H   LK G+  +  + +
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-V 378
            L+  YSKCG + +A  +F      K+V+SW +MI G+ ++     A     +M  E  V
Sbjct: 339 SLLDMYSKCGYLCEARVLFDTNE--KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS-VGTALLNAYVKKGILDEAA 433
           + N  T   +L        F    ++H + ++  + +S   V  A +  Y K G L  A 
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAE 456

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            VF  ++ K + +W+A++ G+ Q G    A+ +Y  +   G++P+ FT +S+++AC A  
Sbjct: 457 GVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSAC-ARL 515

Query: 494 AAVEQGKQFHACSIKA--KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
            ++  GK+ H   ++   +L+  +C+S  LV++Y + G I  A   F    +++LV WN+
Sbjct: 516 KSLSCGKEIHGSMLRNGFELDEFICIS--LVSLYVQCGKILLAKLFFDNMEEKNLVCWNT 573

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           MI G++Q+     AL++F +M    +  D I+ IG + AC+    +  G++     V  H
Sbjct: 574 MINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSH 633

Query: 612 ---HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
              H + T      ++D+Y++ G +E++ +I +R+      T W  ++  
Sbjct: 634 LTEHSFVTCS----LIDMYAKCGCMEQSQNIFDRVHLKGEVT-WNVLITG 678



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 4/166 (2%)

Query: 496 VEQGKQFHA-CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           +E G++ H   S      N + + + LVTMYS   +   +  VF   R+++L  WN+++ 
Sbjct: 109 IEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLS 168

Query: 555 GYAQHGHTKKALEVFKEM-RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
           GY ++   + A+ VF EM    +   D  T   VI AC     V  G+      + +  +
Sbjct: 169 GYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFAL-KTKV 227

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
              +   + ++ +Y + G +E A+ + ++MP   +   W +V+ AC
Sbjct: 228 LSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMYAC 272


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 275/762 (36%), Positives = 445/762 (58%), Gaps = 30/762 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQ+H + +    + +V +   +V  Y +  +V   R  FD +   N  SW S+L+ YA+N
Sbjct: 44  RQIH-DRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQN 102

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 L+L+ RM    ++PN   ++TVLG  A    +     +H+ +    G  +  + 
Sbjct: 103 GHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVIL 159

Query: 218 -NALISMYLKSKMVRDARAVFDGMEDRDSIT-WNSMVAGYVTNELHMEAFETFNNMGLAG 275
            N+L++MY K   + DA+ +F+ M  R S++ WN+M+A Y  +    EA   + +M +  
Sbjct: 160 ENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDV-- 217

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            E +  TF SV+  C+    L   R++H+ +   G + D +++  L+  Y++C  ++DA+
Sbjct: 218 -EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 276

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           KIF  +   +DVVSW+AMI+   +    D A+ F+ +M  EGVRPN +T++ +L A  +V
Sbjct: 277 KIFQRL-PRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 335

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              +    VH  I+   Y+ +   GTAL++ Y   G LDEA  +F+ I+ +D   W+ ++
Sbjct: 336 GDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLI 395

Query: 452 AGYAQIGDTEGAVKIYRQL-TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
            GY++ G   G +++YR++  +  V   +  +S VI+AC A   A    +Q H+      
Sbjct: 396 GGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISAC-ASLGAFADARQAHSDIEADG 454

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           + +   ++++LV MYS+ GN+ESA +VF +   RD ++W ++I GYA+HG    AL ++K
Sbjct: 455 MISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYK 514

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           EM  +  E   +TF+ V+ AC+HAGL ++G+Q F  + +++ ++P + HYSC++DL SRA
Sbjct: 515 EMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRA 574

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLS 676
           G L  A ++IN MP   +   W ++L A R+                L P D A YVLLS
Sbjct: 575 GRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLS 634

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N++A TG+    A VR  M  R VKK  G SWIEV ++ + F  GD SHP+  +I+++L+
Sbjct: 635 NVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQ 694

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
            LS ++K+AGY P++  VL D+ ++ KE +L  HSE+LAIAFGL+AT  G  L+I   LR
Sbjct: 695 RLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLR 754

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +C DCH+ +K IS + RR+I+VRD++RFH F++G CSCGDYW
Sbjct: 755 ICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 233/474 (49%), Gaps = 13/474 (2%)

Query: 32  QSLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + LF+R S +R+   +N ++  Y +    +EA+ L+     + +     T +SVL  C  
Sbjct: 177 KRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVEPSVRTFTSVLSACSN 233

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L     GR++H      G   D+++  +L+ +Y R   ++D  ++F  +   +VVSW+++
Sbjct: 234 LGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAM 293

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++ +A   + D  +E + +MQ+EG++PN +TF++VL   A  G +     VH  ++ NG 
Sbjct: 294 IAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY 353

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           ++      AL+ +Y     + +AR++FD +E+RD   W  ++ GY          E +  
Sbjct: 354 KITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYRE 413

Query: 271 M-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           M        T+  +  VI  CA+      ARQ HS +  +G+  D  + T L+  YS+ G
Sbjct: 414 MKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWG 473

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A ++F  M   +D ++WT +I+G+ ++G   LA+  + +M  EG  P+  T+ ++L
Sbjct: 474 NLESARQVFDKMSS-RDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 532

Query: 390 TAQPAVSPFQVHAHI---IKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKD 443
            A       +    +   I+++Y    ++   + +++   + G L +A ++   +  E +
Sbjct: 533 YACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPN 592

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAV 496
            V WS++L       D + A     Q+T  + V P  +   S ++A T   A +
Sbjct: 593 DVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGM 646


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 293/827 (35%), Positives = 455/827 (55%), Gaps = 29/827 (3%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            LF+   + N V +  L+  Y  +   +E LN++  +R  GL   G+T+++V++TCG   D
Sbjct: 306  LFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGD 365

Query: 94   HVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G Q+  + +KSG     V+V+ SL+ ++   ++VE+  RVF++M E + +SW S+++
Sbjct: 366  KTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIIT 425

Query: 153  GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
              A N   +  L  F  M+    K +  T S +L        +     +H ++ K+G E 
Sbjct: 426  ASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLES 485

Query: 213  VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
               VCN+L+SMY ++    DA  VF  M  RD I+WNSM+A +V +  +  A      M 
Sbjct: 486  NVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEML 545

Query: 273  LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                 +   TF + +  C   ++L++   +H+ V+   +  +  I   L+  Y K G M+
Sbjct: 546  KTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMD 602

Query: 333  DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            +A K+  +M E +DVV+W A+I GH  +   +  +  F  M REG+  N  T  I+    
Sbjct: 603  EAQKVCKIMPE-RDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYIT--IVNLLG 659

Query: 393  PAVSP-------FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
              +SP         +HAHI+   +E    V ++L+  Y + G L+ ++ +F+++  K+  
Sbjct: 660  TCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSS 719

Query: 446  AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
             W+A+ +  A  G  E A+K   ++ ++GV  ++F+FS  + A       +++G+Q H+ 
Sbjct: 720  TWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVAL-ATIGNLTVLDEGQQLHSW 778

Query: 506  SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
             IK        V +A + MY K G I+    +    + R   SWN +I   A+HG  ++A
Sbjct: 779  IIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQA 838

Query: 566  LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
             E F EM    L+ D +TF+ +++AC+H GLVDEG  YF  M +E  +   +EH  C++D
Sbjct: 839  TEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIID 898

Query: 626  LYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAI 671
            L  R+G L +A   I++MP   +  VWR++LAAC              RL  L   D + 
Sbjct: 899  LLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSA 958

Query: 672  YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
            YVL SN+ A+T  W +   VRK M  + +KK+   SWI++KNK  +F  GD  HPQS QI
Sbjct: 959  YVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQI 1018

Query: 732  YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
            Y+KLEEL    ++ G+ PDTSY LQD D+E KE  L  HSER+A+AFGL+ +  G+PL+I
Sbjct: 1019 YAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRI 1078

Query: 792  VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             KNLRVCGDCH+V KL+SK+  R IVVRD+ RFHHF  G CSC DYW
Sbjct: 1079 FKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 169/641 (26%), Positives = 320/641 (49%), Gaps = 22/641 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  Q +FD+   RN   +N ++  + R   + +A+  F  +   G+      ++S++  C
Sbjct: 199 KYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTAC 258

Query: 89  ---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
              GC+ +    RQ+H   VK G   +V V TSL+  Y    +V +  ++F+++ E N+V
Sbjct: 259 DRSGCMTEG--ARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIV 316

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SWTSL+  YA N     VL ++  ++  G+     T +TV+      G      Q+   V
Sbjct: 317 SWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDV 376

Query: 206 IKNGGEVVT-SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           IK+G +  + SV N+LISM+     V +A  VF+ M++RD+I+WNS++     N    E+
Sbjct: 377 IKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEES 436

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F  M     +    T  +++  C + + L+  R LH  + K+G++ +  +   L+  
Sbjct: 437 LGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSM 496

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y++ G  EDA  +F  M   +D++SW +M++ H+++G    A+    +M +     N  T
Sbjct: 497 YAQAGSSEDAELVFHTM-PARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVT 555

Query: 385 YSIILTAQPAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           ++  L+A   +   + VHA +I      +  +G  L+  Y K G++DEA KV +++ E+D
Sbjct: 556 FTTALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERD 615

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V W+A++ G+A   D    ++ +  +  EG+  N  T  +++  C +P   ++ G   H
Sbjct: 616 VVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIH 675

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A  + A       V S+L+TMY++ G++ ++S +F     ++  +WN++    A +G  +
Sbjct: 676 AHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGE 735

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV------NEHHIYPTM 617
           +AL+    MR   ++ D  +F   +    +  ++DEGQQ    ++      +E+ +  TM
Sbjct: 736 EALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATM 795

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                  D+Y + G ++    I+  +P   S   W  +++A
Sbjct: 796 -------DMYGKCGEIDDVFRIL-PIPKIRSKRSWNILISA 828



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 284/573 (49%), Gaps = 22/573 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +H  CVK    ++   + +LV++Y +  +++  + VFD M + N  SW +++SG+ R
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG-IVATAVQVHTMVIKNGGEVVTS 215
                + ++ F  M   G+ P+S+  ++++      G +   A Q+H  V+K G      
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V  +L+  Y     V +A  +F+ +E+ + ++W S++  Y  N    E    + ++   G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSKCGKMEDA 334
              T +T  +VI+ C    +  +  Q+   V+K+G+D    ++   L+  +     +E+A
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
           S++F+ M+E +D +SW ++I+    NG  + ++  F  M R   + +  T S +L A  +
Sbjct: 406 SRVFNNMQE-RDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGS 464

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
               +    +H  I K+  E +  V  +LL+ Y + G  ++A  VF  +  +D+++W++M
Sbjct: 465 AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +A + + G    A+ +  ++       N  TF++ ++AC      +E+ K  HA  I   
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACY----NLEKLKIVHAFVIHFA 580

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           +++ L + + LVTMY K G ++ A +V K   +RD+V+WN++I G+A        ++ F 
Sbjct: 581 VHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFN 640

Query: 571 EMRRQDLEFDGITFIGVITACTHAG-LVDEGQQYFDIMVNEHHIYPTMEH----YSCMVD 625
            MRR+ L  + IT + ++  C     L+  G     + ++ H +    E      S ++ 
Sbjct: 641 LMRREGLLSNYITIVNLLGTCMSPDYLLKHG-----MPIHAHIVVAGFELDTYVQSSLIT 695

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +Y++ G L  +  I + +    S+T W  + +A
Sbjct: 696 MYAQCGDLNTSSYIFDVLANKNSST-WNAIFSA 727



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 190/374 (50%), Gaps = 18/374 (4%)

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           E  + + LH+  +K+ I  +      L+  YSK G ++ A  +F  M +  D  SW  MI
Sbjct: 162 EGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDA-SWNNMI 220

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNY 409
           SG ++ G    A+ FFC M   GV P+ +  + ++TA            Q+H +++K   
Sbjct: 221 SGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGL 280

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
             +  VGT+LL+ Y   G + EA K+FE I+E +IV+W++++  YA  G T+  + IYR 
Sbjct: 281 MSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRH 340

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN-NALCVSSALVTMYSKK 528
           L   G+     T ++VI  C         G Q     IK+ L+ +++ V+++L++M+   
Sbjct: 341 LRHNGLICTGNTMATVIRTCGMFGDKT-MGYQILGDVIKSGLDTSSVSVANSLISMFGNY 399

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
            ++E AS VF   ++RD +SWNS+I   A +G  +++L  F  MRR   + D IT   ++
Sbjct: 400 DSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALL 459

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC----MVDLYSRAGMLEKAMDIINRMP 644
            AC  A  +  G+    ++         +E   C    ++ +Y++AG  E A  + + MP
Sbjct: 460 PACGSAQHLKWGRGLHGLITKS-----GLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP 514

Query: 645 FAASATVWRTVLAA 658
            A     W +++A+
Sbjct: 515 -ARDLISWNSMMAS 527


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/669 (40%), Positives = 404/669 (60%), Gaps = 49/669 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA-GA 276
           N L+  Y K+ ++ +  + F+ + DRD +TWN ++ GY  + L   A + +N M     A
Sbjct: 76  NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            LTR T ++++KL ++   + L +Q+H QV+K G +    + + L+  Y+  G + DA K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195

Query: 337 IF----------------------------SMMREM-KDVVSWTAMISGHLQNGAIDLAV 367
           +F                             + R M KD VSW AMI G  QNG    A+
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
             F +M  +G++ + + +  +L A   +       Q+HA II+TN++    VG+AL++ Y
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K   L  A  VF+ + +K++V+W+AM+ GY Q G  E AVKI+  +   G+ P+ +T  
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
             I+AC A  +++E+G QFH  +I + L + + VS++LVT+Y K G+I+ ++ +F     
Sbjct: 376 QAISAC-ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           RD VSW +M+  YAQ G   + +++F +M +  L+ DG+T  GVI+AC+ AGLV++GQ+Y
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--- 660
           F +M +E+ I P++ HYSCM+DL+SR+G LE+AM  IN MPF   A  W T+L+ACR   
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554

Query: 661 -----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
                      LI L PH  A Y LLS++YA+ G W   A++R+ M ++ VKKE G SWI
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614

Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
           + K K +SF A D S P  +QIY+KLEEL+ ++ D GYKPDTS+V  D+++  K  +L+ 
Sbjct: 615 KWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNY 674

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSERLAIAFGL+  P+G P+++ KNLRVC DCH   K IS +  R+I+VRD  RFH FK+
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734

Query: 830 GLCSCGDYW 838
           G CSCGD+W
Sbjct: 735 GTCSCGDFW 743



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 240/515 (46%), Gaps = 48/515 (9%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIK 176
           +L+  Y +   + +    F+ + + + V+W  L+ GY+ + +    ++ ++ M  +    
Sbjct: 77  NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
               T  T+L + +  G V+   Q+H  VIK G E    V + L+ MY     + DA+ V
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196

Query: 237 FDGMEDR------------------------------DSITWNSMVAGYVTNELHMEAFE 266
           F G++DR                              DS++W +M+ G   N L  EA E
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIE 256

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M + G ++ +  F SV+  C     +   +Q+H+ +++        + + L+  Y 
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC  +  A  +F  M++ K+VVSWTAM+ G+ Q G  + AV  F  M R G+ P+ +T  
Sbjct: 317 KCKCLHYAKTVFDRMKQ-KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             ++A   VS      Q H   I +      +V  +L+  Y K G +D++ ++F  ++ +
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ- 501
           D V+W+AM++ YAQ G     ++++ ++   G+KP+  T + VI+AC+  +  VE+G++ 
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR-AGLVEKGQRY 494

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
           F   + +  +  ++   S ++ ++S+ G +E A           D + W +++      G
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554

Query: 561 HTKKALEVFKEMRRQDLEFD-----GITFIGVITA 590
           +    LE+ K      +E D     G T +  I A
Sbjct: 555 N----LEIGKWAAESLIELDPHHPAGYTLLSSIYA 585



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 220/467 (47%), Gaps = 38/467 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGC 90
           +S F++ P R+ V +N L+  Y    L   A+  +   +R     L   TL ++LK    
Sbjct: 92  ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF---DDMN------- 140
                 G+Q+H + +K GF   + V + L+ +Y     + D ++VF   DD N       
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211

Query: 141 --------------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
                               E + VSW +++ G A+N +    +E F  M+V+G+K + +
Sbjct: 212 MGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            F +VL      G +    Q+H  +I+   +    V +ALI MY K K +  A+ VFD M
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
           + ++ ++W +MV GY       EA + F +M  +G +    T    I  CA    L    
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           Q H + + +G+     +   L+  Y KCG ++D++++F+ M  ++D VSWTAM+S + Q 
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQF 450

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG- 416
           G     +  F +M + G++P+G T + +++A      V   Q +  ++ + Y    S+G 
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510

Query: 417 -TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
            + +++ + + G L+EA +    +    D + W+ +L+     G+ E
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 160/331 (48%), Gaps = 1/331 (0%)

Query: 37  RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
           R  +++ V +  ++    ++ L +EA+  F  ++  GL +      SVL  CG L     
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H   +++ F   + V ++L+D+Y +   +   + VFD M + NVVSWT+++ GY +
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
               +  +++F  MQ  GI P+ +T    +   A+   +    Q H   I +G     +V
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+L+++Y K   + D+  +F+ M  RD+++W +MV+ Y      +E  + F+ M   G 
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468

Query: 277 ELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           +    T   VI  C+    + +  R       + GI       + ++  +S+ G++E+A 
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +  + M    D + WT ++S     G +++ 
Sbjct: 529 RFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 279/782 (35%), Positives = 449/782 (57%), Gaps = 20/782 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+    R+ V +  +L  Y ++ L +EAL L+  + R G+      LSSVL +C     
Sbjct: 99  VFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAEL 158

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR +H +  K GF  ++ V  +++ LY+R  +     RVF DM   + V++ +L+SG
Sbjct: 159 FAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG 218

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +A+    +  LE+F  MQ  G+ P+  T S++L   A  G +    Q+H+ + K G    
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +  +L+ +Y+K   V  A  +F+  +  + + WN M+  +       ++FE F  M  
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG    + T+  +++ C  T+E+ L  Q+HS  +K G + D  +   L+  YSK G +E 
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++  M++E KDVVSWT+MI+G++Q+     A+  F +M + G+ P+    +  ++   
Sbjct: 399 ARRVLEMLKE-KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457

Query: 394 AVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++      Q+HA I  + Y    S+  AL+N Y + G + EA   FE I+ KD + W+ 
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +++G+AQ G  E A+K++ ++   GVK N FTF S ++A +A  A ++QGKQ HA  IK 
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA-SANLAEIKQGKQIHARVIKT 576

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             +    V +AL+++Y K G+ E A   F    +R+ VSWN++I   +QHG   +AL++F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M+++ ++ + +TFIGV+ AC+H GLV+EG  YF  M +E+ I P  +HY+C++D++ R
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L++A   I  MP AA A VWRT+L+AC+              L+ L+PHDSA YVLL
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN YA T  W  R +VRK+M DR V+KE G SWIEVKN  ++F  GD  HP + QIY+ L
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
             ++ R+   GYK +  ++  D + E ++     HSE+LA+ FGL++ P   PL+++KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876

Query: 796 RV 797
           RV
Sbjct: 877 RV 878



 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 291/565 (51%), Gaps = 8/565 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H + V  G  +   V   L+DLY +   V   RRVF++++  + VSW ++LSGYA+N 
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           + +  L L+ +M   G+ P  +  S+VL       + A    +H    K+G      V N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           A+I++YL+    R A  VF  M  RD++T+N++++G+        A E F  M  +G   
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T  S++  CA+  +L+   QLHS + K GI  D+ +   L+  Y KCG +E A  IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           +   +  +VV W  M+    Q   +  +   FCQM   G+RPN FTY  IL         
Sbjct: 303 N-SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+H+  +KT +E    V   L++ Y K G L++A +V E++ EKD+V+W++M+AGY
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q    + A+  ++++   G+ P+    +S I+ C   + A+ QG Q HA    +  +  
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN-AMRQGLQIHARIYVSGYSGD 480

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + + +ALV +Y++ G I  A   F+    +D ++WN ++ G+AQ G  ++AL+VF  M +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             ++ +  TF+  ++A  +   + +G+Q    ++   H + T E  + ++ LY + G  E
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET-EVGNALISLYGKCGSFE 599

Query: 635 KAMDIINRMPFAASATVWRTVLAAC 659
            A    + M    +   W T++ +C
Sbjct: 600 DAKMEFSEMS-ERNEVSWNTIITSC 623



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 282/560 (50%), Gaps = 22/560 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P R+ V +N L+  + +    + AL +F  ++  GL     T+SS+L  C  L
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G Q+H    K+G + D  +  SL+DLY++  +VE    +F+  + +NVV W  +L
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 152 SGYARNKMND--RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
             +   ++ND  +  ELF +MQ  GI+PN FT+  +L        +    Q+H++ +K G
Sbjct: 318 VAFG--QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG 375

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    V   LI MY K   +  AR V + ++++D ++W SM+AGYV +E   +A   F 
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFK 435

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G         S I  CA    +R   Q+H+++  +G   D +I   L+  Y++CG
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCG 495

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++ +A   F  + E KD ++W  ++SG  Q+G  + A+  F +M + GV+ N FT+   L
Sbjct: 496 RIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +A   ++      Q+HA +IKT +     VG AL++ Y K G  ++A   F  + E++ V
Sbjct: 555 SASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV 614

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+ ++   +Q G    A+ ++ Q+  EG+KPN+ TF  V+ AC+      E    F + 
Sbjct: 615 SWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSM 674

Query: 506 S----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
           S    I+ + ++  CV    + ++ + G ++ A +  +      D + W +++     H 
Sbjct: 675 SDEYGIRPRPDHYACV----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH- 729

Query: 561 HTKKALEVFKEMRRQDLEFD 580
              K +EV +   +  LE +
Sbjct: 730 ---KNIEVGEFAAKHLLELE 746



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 165/339 (48%), Gaps = 23/339 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + + +   +++ V +  ++  Y +    ++AL  F  +++ G+      L+S +  C
Sbjct: 397 EKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G Q+H     SG++ DV++  +LV+LY R   + +    F+++   + ++W 
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            L+SG+A++ +++  L++F RM   G+K N FTF + L   A+   +    Q+H  VIK 
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    T V NALIS+Y K     DA+  F  M +R+ ++WN+++     +   +EA + F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNIR---- 318
           + M   G +    TF+ V+  C+           H  +++ G+ +      ++ IR    
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACS-----------HVGLVEEGLSYFKSMSDEYGIRPRPD 685

Query: 319 --TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               ++  + + G+++ A K    M    D + W  ++S
Sbjct: 686 HYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 1/200 (0%)

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           LAG+    D    + ++     +        F+  + AC       +   + HA ++   
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L     V + L+ +YSK G +  A  VF+    RD VSW +M+ GYAQ+G  ++AL +++
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           +M R  +         V+++CT A L  +G +       +H     +   + ++ LY R 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 631 GMLEKAMDIINRMPFAASAT 650
           G    A  +   MP   + T
Sbjct: 192 GSFRLAERVFCDMPHRDTVT 211


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 279/782 (35%), Positives = 449/782 (57%), Gaps = 20/782 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+    R+ V +  +L  Y ++ L +EAL L+  + R G+      LSSVL +C     
Sbjct: 99  VFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAEL 158

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR +H +  K GF  ++ V  +++ LY+R  +     RVF DM   + V++ +L+SG
Sbjct: 159 FAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG 218

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +A+    +  LE+F  MQ  G+ P+  T S++L   A  G +    Q+H+ + K G    
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +  +L+ +Y+K   V  A  +F+  +  + + WN M+  +       ++FE F  M  
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG    + T+  +++ C  T+E+ L  Q+HS  +K G + D  +   L+  YSK G +E 
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++  M++E KDVVSWT+MI+G++Q+     A+  F +M + G+ P+    +  ++   
Sbjct: 399 ARRVLEMLKE-KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457

Query: 394 AVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++      Q+HA I  + Y    S+  AL+N Y + G + EA   FE I+ KD + W+ 
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +++G+AQ G  E A+K++ ++   GVK N FTF S ++A +A  A ++QGKQ HA  IK 
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA-SANLAEIKQGKQIHARVIKT 576

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             +    V +AL+++Y K G+ E A   F    +R+ VSWN++I   +QHG   +AL++F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M+++ ++ + +TFIGV+ AC+H GLV+EG  YF  M +E+ I P  +HY+C++D++ R
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L++A   I  MP AA A VWRT+L+AC+              L+ L+PHDSA YVLL
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN YA T  W  R +VRK+M DR V+KE G SWIEVKN  ++F  GD  HP + QIY+ L
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
             ++ R+   GYK +  ++  D + E ++     HSE+LA+ FGL++ P   PL+++KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876

Query: 796 RV 797
           RV
Sbjct: 877 RV 878



 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 291/565 (51%), Gaps = 8/565 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H + V  G  +   V   L+DLY +   V   RRVF++++  + VSW ++LSGYA+N 
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           + +  L L+ +M   G+ P  +  S+VL       + A    +H    K+G      V N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           A+I++YL+    R A  VF  M  RD++T+N++++G+        A E F  M  +G   
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T  S++  CA+  +L+   QLHS + K GI  D+ +   L+  Y KCG +E A  IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           +   +  +VV W  M+    Q   +  +   FCQM   G+RPN FTY  IL         
Sbjct: 303 N-SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+H+  +KT +E    V   L++ Y K G L++A +V E++ EKD+V+W++M+AGY
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q    + A+  ++++   G+ P+    +S I+ C   + A+ QG Q HA    +  +  
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN-AMRQGLQIHARIYVSGYSGD 480

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + + +ALV +Y++ G I  A   F+    +D ++WN ++ G+AQ G  ++AL+VF  M +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             ++ +  TF+  ++A  +   + +G+Q    ++   H + T E  + ++ LY + G  E
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET-EVGNALISLYGKCGSFE 599

Query: 635 KAMDIINRMPFAASATVWRTVLAAC 659
            A    + M    +   W T++ +C
Sbjct: 600 DAKMEFSEMS-ERNEVSWNTIITSC 623



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 282/560 (50%), Gaps = 22/560 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P R+ V +N L+  + +    + AL +F  ++  GL     T+SS+L  C  L
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G Q+H    K+G + D  +  SL+DLY++  +VE    +F+  + +NVV W  +L
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 152 SGYARNKMND--RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
             +   ++ND  +  ELF +MQ  GI+PN FT+  +L        +    Q+H++ +K G
Sbjct: 318 VAFG--QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG 375

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    V   LI MY K   +  AR V + ++++D ++W SM+AGYV +E   +A   F 
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFK 435

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G         S I  CA    +R   Q+H+++  +G   D +I   L+  Y++CG
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCG 495

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++ +A   F  + E KD ++W  ++SG  Q+G  + A+  F +M + GV+ N FT+   L
Sbjct: 496 RIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +A   ++      Q+HA +IKT +     VG AL++ Y K G  ++A   F  + E++ V
Sbjct: 555 SASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV 614

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+ ++   +Q G    A+ ++ Q+  EG+KPN+ TF  V+ AC+      E    F + 
Sbjct: 615 SWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSM 674

Query: 506 S----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
           S    I+ + ++  CV    + ++ + G ++ A +  +      D + W +++     H 
Sbjct: 675 SDEYGIRPRPDHYACV----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH- 729

Query: 561 HTKKALEVFKEMRRQDLEFD 580
              K +EV +   +  LE +
Sbjct: 730 ---KNIEVGEFAAKHLLELE 746



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 165/339 (48%), Gaps = 23/339 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + + +   +++ V +  ++  Y +    ++AL  F  +++ G+      L+S +  C
Sbjct: 397 EKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G Q+H     SG++ DV++  +LV+LY R   + +    F+++   + ++W 
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWN 516

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            L+SG+A++ +++  L++F RM   G+K N FTF + L   A+   +    Q+H  VIK 
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    T V NALIS+Y K     DA+  F  M +R+ ++WN+++     +   +EA + F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNIR---- 318
           + M   G +    TF+ V+  C+           H  +++ G+ +      ++ IR    
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACS-----------HVGLVEEGLSYFKSMSDEYGIRPRPD 685

Query: 319 --TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               ++  + + G+++ A K    M    D + W  ++S
Sbjct: 686 HYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 1/200 (0%)

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           LAG+    D    + ++     +        F+  + AC       +   + HA ++   
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L     V + L+ +YSK G +  A  VF+    RD VSW +M+ GYAQ+G  ++AL +++
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           +M R  +         V+++CT A L  +G +       +H     +   + ++ LY R 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 631 GMLEKAMDIINRMPFAASAT 650
           G    A  +   MP   + T
Sbjct: 192 GSFRLAERVFCDMPHRDTVT 211


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 272/747 (36%), Positives = 434/747 (58%), Gaps = 49/747 (6%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD     +++  Y  +  + + R++F +    + ++W+SL+SGY R   +   LELF  M
Sbjct: 70  RDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEM 129

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           Q EG +PN FT+ +VL V +   ++    Q+H   IK   +    V   L+ MY K K +
Sbjct: 130 QYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCI 189

Query: 231 RDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            +A  +F+   D R+ + W +MV GY  N    +A E F +M   G E  + TF S++  
Sbjct: 190 LEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTA 249

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C +        Q+H  ++++G   +  + + L+  YSKCG + +A ++   M E+ D VS
Sbjct: 250 CGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETM-EVDDPVS 308

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHII 405
           W +MI G ++ G  + A++ F  M    ++ + FTY  +L     V    +   VH+ I+
Sbjct: 309 WNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIV 368

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           KT +E    V  AL++ Y K+G  D A  VFE + +KD+++W++++ G    G  E A++
Sbjct: 369 KTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALR 428

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++ ++   G+ P++   ++V++AC A    +E GKQ HA  +K+ L ++L V ++LV+MY
Sbjct: 429 LFCEMRIMGIHPDQIVIAAVLSAC-AELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMY 487

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           +K G IE A++VF     +D+++W ++I GYAQ+G            R +D         
Sbjct: 488 AKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNG------------RGRD--------- 526

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
                  HAGLV+ G+ YF  M   + I P  EHY+CM+DL  R+G L +A +++N+M  
Sbjct: 527 -------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAV 579

Query: 646 AASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARV 691
              ATVW+ +LAACR              L  L+P ++  YVLLSN+Y+A G W+E A+ 
Sbjct: 580 QPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKT 639

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           R+LM  R V KE G SWIE+ +K + F++ D SHP++ +IYSK++E+   +K+AGY PD 
Sbjct: 640 RRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDM 699

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           ++ L D+D+E KE  L+ HSE+LA+AFGL+  P GAP++I KNLR+CGDCHT +K +S +
Sbjct: 700 NFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGV 759

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             R +++RD+N FHHF+EG CSC DYW
Sbjct: 760 FHRHVILRDSNCFHHFREGACSCSDYW 786



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 272/529 (51%), Gaps = 22/529 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF  +P R+ + ++ L+  YCR     EAL LF  ++  G      T  SVL+ C   
Sbjct: 92  RKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMY 151

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-DMNESNVVSWTSL 150
                G+Q+H   +K+ F  +  V T LVD+Y +   + +   +F+   ++ N V WT++
Sbjct: 152 VLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAM 211

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++GY++N    + +E F  M+ EGI+ N FTF ++L             QVH  ++++G 
Sbjct: 212 VTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGF 271

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V +AL+ MY K   + +AR + + ME  D ++WNSM+ G V   L  EA   F  
Sbjct: 272 GANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRI 331

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L   ++   T+ SV+   +   ++R A  +HS ++K G +    +   L+  Y+K G 
Sbjct: 332 MHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGY 391

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            + A  +F  M + KDV+SWT++++G + NG+ + A+  FC+M   G+ P+    + +L+
Sbjct: 392 FDYAFDVFEKMTD-KDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS 450

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   ++      QVHA+ +K+    S SV  +L++ Y K G +++A KVF+ ++ +D++ 
Sbjct: 451 ACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVIT 510

Query: 447 WSAMLAGYAQIG---DTEGAV---KIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQ 498
           W+A++ GYAQ G   D  G V   + Y Q   E  G+KP    ++ +I+        +E 
Sbjct: 511 WTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEA 570

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE----SASEVFKRQRK 543
            +  +  +++        V  AL+      GN+E    +A+ +F+ + K
Sbjct: 571 KELLNQMAVQPDAT----VWKALLAACRVHGNVELGERAANNLFELEPK 615



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 234/461 (50%), Gaps = 37/461 (8%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSM-------------------------- 251
           N ++S   K   V DAR +FD M DRD  +WN+M                          
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCI 104

Query: 252 -----VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
                ++GY      +EA E F  M   G    + T+ SV+++C+    L   +Q+H+  
Sbjct: 105 TWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA 164

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +K   D +  + TGL+  Y+KC  + +A  +F +  + ++ V WTAM++G+ QNG    A
Sbjct: 165 IKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKA 224

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
           +  F  M  EG+  N FT+  ILTA  ++S      QVH  I+++ +  +  VG+AL++ 
Sbjct: 225 IECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDM 284

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G L  A ++ E ++  D V+W++M+ G  + G  E A+ ++R +    +K +EFT+
Sbjct: 285 YSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTY 344

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            SV+N C +    +      H+  +K        V++ALV MY+K+G  + A +VF++  
Sbjct: 345 PSVLN-CFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMT 403

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D++SW S++ G   +G  ++AL +F EMR   +  D I    V++AC    +++ G+Q
Sbjct: 404 DKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQ 463

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
                +    +  ++   + +V +Y++ G +E A  + + M
Sbjct: 464 VHANFLKS-GLGSSLSVDNSLVSMYAKCGCIEDANKVFDSM 503



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 230/458 (50%), Gaps = 16/458 (3%)

Query: 32  QSLFDRSP-QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + LF+ +P +RN V +  ++  Y ++    +A+  F  +R  G+     T  S+L  CG 
Sbjct: 193 EYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGS 252

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +    FG QVH   V+SGF  +V V ++LVD+Y +  ++ + RR+ + M   + VSW S+
Sbjct: 253 ISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSM 312

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + G  R  + +  L LF  M +  +K + FT+ +VL   +    +  A+ VH++++K G 
Sbjct: 313 IVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGF 372

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E    V NAL+ MY K      A  VF+ M D+D I+W S+V G V N  + EA   F  
Sbjct: 373 EAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCE 432

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M + G    +    +V+  CA    L   +Q+H+  LK+G+    ++   L+  Y+KCG 
Sbjct: 433 MRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGC 492

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQN-------GAIDLAVNFFCQMTR-EGVRPNG 382
           +EDA+K+F  M E++DV++WTA+I G+ QN       G ++   ++F  M    G++P  
Sbjct: 493 IEDANKVFDSM-EIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGP 551

Query: 383 FTYSIILTAQPAVSPFQVHAHII-KTNYEKSFSVGTALLNAYVKKGILD----EAAKVFE 437
             Y+ ++              ++ +   +   +V  ALL A    G ++     A  +FE
Sbjct: 552 EHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFE 611

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
           L + K+ V +  +   Y+  G  E A K  R +   GV
Sbjct: 612 L-EPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGV 648



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 60/380 (15%)

Query: 326 SKCGKMEDASKIFSMMRE------------------------------MKDVVSWTAMIS 355
           SKCG+++DA K+F +M +                              ++  ++W+++IS
Sbjct: 52  SKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLIS 111

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
           G+ + G    A+  F +M  EG RPN FT+  +L             Q+HAH IKT ++ 
Sbjct: 112 GYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDS 171

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELI-DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           +  V T L++ Y K   + EA  +FEL  D+++ V W+AM+ GY+Q GD   A++ +R +
Sbjct: 172 NAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDM 231

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
             EG++ N+FTF S++ AC + SA    G Q H C +++     + V SALV MYSK G+
Sbjct: 232 RGEGIECNQFTFPSILTACGSISAC-GFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGD 290

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           + +A  + +     D VSWNSMI G  + G  ++AL +F+ M  + ++ D  T+  V+  
Sbjct: 291 LSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNC 350

Query: 591 CT-----------HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
            +           H+ +V  G + + ++ N             +VD+Y++ G  + A D+
Sbjct: 351 FSFVMDMRNAMSVHSLIVKTGFEAYKLVNNA------------LVDMYAKRGYFDYAFDV 398

Query: 640 INRMPFAASATVWRTVLAAC 659
             +M        W +++  C
Sbjct: 399 FEKMT-DKDVISWTSLVTGC 417


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 276/772 (35%), Positives = 435/772 (56%), Gaps = 33/772 (4%)

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            C F H+   + H + +++G+  D+   T L             R +F  + + ++  + 
Sbjct: 18  ACTFPHL--AETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFN 75

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            L+ G++ +     +    H ++   + P++FT++  +    D+ +    + +H   + +
Sbjct: 76  VLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVD 132

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +    V +AL+ +Y K   V  AR VFD M DRD++ WN+M+ G V N  + ++ + F
Sbjct: 133 GFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVF 192

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +M   G  L  +T  +V+   A  +E+++   +    LK G  FD  + TGL+  +SKC
Sbjct: 193 KDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKC 252

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
             ++ A  +F M+R+  D+VS+ A+ISG   NG  + AV +F ++   G R    + S +
Sbjct: 253 EDVDTARLLFGMIRK-PDLVSYNALISGFSCNGETECAVKYFRELLVSGQR---VSSSTM 308

Query: 389 LTAQPAVSPFQVHAHI--------IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +   P  SPF  H H+        +K+      SV TAL   Y +   +D A ++F+   
Sbjct: 309 VGLIPVSSPFG-HLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESS 367

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           EK + AW+AM++GYAQ G TE A+ +++++ +    PN  T +S+++AC A   A+  GK
Sbjct: 368 EKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSAC-AQLGALSFGK 426

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
             H       L   + VS+AL+ MY+K GNI  AS++F    +++ V+WN+MI GY  HG
Sbjct: 427 SVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHG 486

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
           +  +AL++F EM     +   +TF+ V+ AC+HAGLV EG + F  MVN++ I P  EHY
Sbjct: 487 YGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHY 546

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQP 666
           +CMVD+  RAG LEKA++ I +MP      VW T+L AC              RL  L P
Sbjct: 547 ACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDP 606

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            +   YVLLSN+Y+   ++ + A VR+ +  R + K  G + IEV    + F+ GD SH 
Sbjct: 607 GNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHS 666

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           Q+  IY+KLEEL+ ++++ GY+ +T   L D+++E KE + + HSE+LAIAFGL+ T  G
Sbjct: 667 QTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPG 726

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             ++I+KNLRVC DCH   K ISK+  R IVVRD NRFHHFK+G+CSCGDYW
Sbjct: 727 TEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 232/485 (47%), Gaps = 25/485 (5%)

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           +T+L +++         + H  +I+NG +   +    L          R ARA+F  +  
Sbjct: 9   NTLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPK 68

Query: 243 RDSITWNSMVAGYVTNELHMEAFE-TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            D   +N ++ G+       +A   +F    L    L+   F     + A+  +  L   
Sbjct: 69  PDIFLFNVLIKGF---SFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDD-NLGMC 124

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LH+  + +G D +  + + L+  Y K  ++  A K+F  M + +D V W  MI+G ++N 
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPD-RDTVLWNTMITGLVRNC 183

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFS 414
             D +V  F  M  +GVR +  T + +L   PAV+  Q       +    +K  +     
Sbjct: 184 CYDDSVQVFKDMVAQGVRLDSTTVATVL---PAVAEMQEVKVGMGIQCLALKLGFHFDDY 240

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V T L++ + K   +D A  +F +I + D+V+++A+++G++  G+TE AVK +R+L   G
Sbjct: 241 VLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSG 300

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
            + +  T   +I   ++P   +          +K+       VS+AL T+YS+   I+ A
Sbjct: 301 QRVSSSTMVGLI-PVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLA 359

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            ++F    ++ + +WN+MI GYAQ G T+ A+ +F+EM   +   + +T   +++AC   
Sbjct: 360 RQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQL 419

Query: 595 GLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           G +  G+    ++ +   E +IY +    + ++D+Y++ G + +A  + + +    +   
Sbjct: 420 GALSFGKSVHQLIKSKNLEQNIYVS----TALIDMYAKCGNISEASQLFD-LTSEKNTVT 474

Query: 652 WRTVL 656
           W T++
Sbjct: 475 WNTMI 479



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 221/463 (47%), Gaps = 33/463 (7%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   +FD+ P R+ V +N ++    R+  + +++ +F  +   G+ L  +T+++VL 
Sbjct: 156 YARK---VFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLP 212

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               + +   G  + C  +K GF  D  V T L+ ++ +  +V+  R +F  + + ++VS
Sbjct: 213 AVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVS 272

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           + +L+SG++ N   +  ++ F  + V G + +S T   ++ V +  G +  A  +    +
Sbjct: 273 YNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCV 332

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K+G  +  SV  AL ++Y +   +  AR +FD   ++    WN+M++GY  + L   A  
Sbjct: 333 KSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAIS 392

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M          T  S++  CA    L   + +H  +    ++ +  + T L+  Y+
Sbjct: 393 LFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYA 452

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG + +AS++F +  E K+ V+W  MI G+  +G  D A+  F +M   G +P+  T+ 
Sbjct: 453 KCGNISEASQLFDLTSE-KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFL 511

Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
            +L A         HA +++         G  + +A V K  ++  A+            
Sbjct: 512 SVLYACS-------HAGLVRE--------GDEIFHAMVNKYRIEPLAE-----------H 545

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           ++ M+    + G  E A++  R++    V+P    + +++ AC
Sbjct: 546 YACMVDILGRAGQLEKALEFIRKMP---VEPGPAVWGTLLGAC 585


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 302/773 (39%), Positives = 452/773 (58%), Gaps = 36/773 (4%)

Query: 93  DHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVSWTSL 150
           D   GR +H   ++S     D  V+ SL+ +Y +   VE  RRVFD M    ++VSWT++
Sbjct: 55  DLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAM 114

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTF-STVLGVLADEGIVATAVQVHTMVIKNG 209
            S  ARN      L L   M   G++PN+FT  +        E        V   V+K G
Sbjct: 115 ASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTG 174

Query: 210 --GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
             G  V+  C ALI M+ ++  +  A+ VFDG+ +R S+ W  ++  YV      +  E 
Sbjct: 175 FWGTDVSVGC-ALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVEL 233

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F +M   G E    +  S+I  C     +RL +QLHS  L+ G+  D  +  GL+  Y+K
Sbjct: 234 FLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAK 293

Query: 328 CG---KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV-NFFCQMTREGVRPNGF 383
                 ME A K+F  M    +V+SWTA+ISG++Q+G  +  V   F +M  E +RPN  
Sbjct: 294 LKMERSMEHARKVFKTMPR-HNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHI 352

Query: 384 TYSIILTAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           TYS +L A   +S      Q+HAH++KT+      VG AL++ Y + G ++EA K F+ +
Sbjct: 353 TYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQL 412

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
            E +I++ S  +    +  +   + KI  +   +GV  + FTF+S+++A  A    + +G
Sbjct: 413 YETNILSMSPDVE--TERNNASCSSKI--EGMDDGV--STFTFASLLSA-AASVGLLTKG 465

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           ++ HA S+KA   +   +S++LV+MY++ G +E A   F   +  +++SW S+I G A+H
Sbjct: 466 QKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKH 525

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G+ K+AL +F +M    ++ + +T+I V++AC+H GLV EG+++F  M  +H + P MEH
Sbjct: 526 GYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEH 585

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y+C+VDL +R+G++E+A   IN MP  A A VW+T+L+ACR              +I+L+
Sbjct: 586 YACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLE 645

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D A YVLLSN+YA  G W E AR+R LM D+ + KE G SW++V N  + F AGD SH
Sbjct: 646 PRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSH 705

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P +  IY+KL  L   +KD GY PDTS VL D+ +E KE  L QHSE++A+AFGL+ T A
Sbjct: 706 PLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSA 765

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             P++I KNLRVC DCH+ IK ISK   R+I++RD+NRFH  K+G+CSCG+YW
Sbjct: 766 TKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 228/475 (48%), Gaps = 32/475 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +FD   +R  V +  L+  Y +     + + LFL +   G    G ++SS++  C  L
Sbjct: 200 QRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTEL 259

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN---NVEDGRRVFDDMNESNVVSWT 148
                G+Q+H   ++ G   D  VS  LVD+Y +     ++E  R+VF  M   NV+SWT
Sbjct: 260 GSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWT 319

Query: 149 SLLSGYARNKMND-RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +L+SGY ++ + +  V+ LF  M  E I+PN  T+S +L   A+     +  Q+H  V+K
Sbjct: 320 ALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLK 379

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
                V  V NAL+SMY +S  + +AR  FD + + + ++ +  V     N       E 
Sbjct: 380 TSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEG 439

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            ++       ++  TF S++   A+   L   ++LH+  +K G   D  I   L+  Y++
Sbjct: 440 MDD------GVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYAR 493

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +EDA + F  M++  +V+SWT++ISG  ++G    A++ F  M   GV+PN  TY  
Sbjct: 494 CGYLEDACRAFDEMKD-HNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIA 552

Query: 388 ILTAQPAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDEAAK- 434
           +L+A         H  ++K   E   S+               +++   + G+++EA + 
Sbjct: 553 VLSACS-------HVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQF 605

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSEGVKPNEFTFSSVINA 488
           + E+  + D + W  +L+     G+TE G +     +  E   P  +   S + A
Sbjct: 606 INEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYA 660



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 266/542 (49%), Gaps = 34/542 (6%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--GCLFDHVFGR 98
           R+ V +  +     R+   +E+L L   +  LGL     TL +  + C    LF  + G 
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELF-RLAGG 164

Query: 99  QVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
            V    +K+GF   DV+V  +L+D++ R  ++   +RVFD + E   V WT L++ Y + 
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
               +V+ELF  M  +G +P+ ++ S+++    + G V    Q+H++ ++ G    + V 
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284

Query: 218 NALISMYLKSKMVRD---ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
             L+ MY K KM R    AR VF  M   + ++W ++++GYV +       +  N M L 
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQS-----GVQENNVMALF 339

Query: 275 GAELTRS------TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
              L  S      T+ +++K CA   +    RQ+H+ VLK  I   + +   L+  Y++ 
Sbjct: 340 REMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAES 399

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP--NGFTYS 386
           G ME+A K F  + E  +++S +  +     N +        C    EG+    + FT++
Sbjct: 400 GCMEEARKAFDQLYE-TNILSMSPDVETERNNAS--------CSSKIEGMDDGVSTFTFA 450

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L+A  +V       ++HA  +K  +     +  +L++ Y + G L++A + F+ + + 
Sbjct: 451 SLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDH 510

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           ++++W+++++G A+ G  + A+ ++  +   GVKPN+ T+ +V++AC+      E  + F
Sbjct: 511 NVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHF 570

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
            +      L   +   + +V + ++ G +E A +       K D + W +++     +G+
Sbjct: 571 RSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGN 630

Query: 562 TK 563
           T+
Sbjct: 631 TE 632



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 202/371 (54%), Gaps = 27/371 (7%)

Query: 291 ATTKELRLARQLHSQVLKNGI-DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           A   +LRL R LH ++L++ I D D  +   L+  YSKCG +E A ++F  M  ++D+VS
Sbjct: 51  ARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVS 110

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--------VH 401
           WTAM S   +NGA   ++    +M   G+RPN FT   +  A  A  P +        V 
Sbjct: 111 WTAMASCLARNGAERESLRLLGEMLELGLRPNAFT---LCAAARACFPQELFRLAGGVVL 167

Query: 402 AHIIKTNYEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
             ++KT +  +  SVG AL++ + + G L  A +VF+ + E+  V W+ ++  Y Q G  
Sbjct: 168 GFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCA 227

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
              V+++  +  +G +P+ ++ SS+I+ACT    +V  G+Q H+ +++  L +  CVS  
Sbjct: 228 SKVVELFLHMLDDGFEPDGYSMSSMISACT-ELGSVRLGQQLHSVALRLGLVSDSCVSCG 286

Query: 521 LVTMYSK---KGNIESASEVFKRQRKRDLVSWNSMICGYAQHG-HTKKALEVFKEMRRQD 576
           LV MY+K   + ++E A +VFK   + +++SW ++I GY Q G      + +F+EM  + 
Sbjct: 287 LVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNES 346

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY----SCMVDLYSRAGM 632
           +  + IT+  ++ AC +    D G+Q     ++ H +  ++ H     + +V +Y+ +G 
Sbjct: 347 IRPNHITYSNLLKACANLSDQDSGRQ-----IHAHVLKTSIAHVNVVGNALVSMYAESGC 401

Query: 633 LEKAMDIINRM 643
           +E+A    +++
Sbjct: 402 MEEARKAFDQL 412


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/671 (40%), Positives = 411/671 (61%), Gaps = 52/671 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA- 276
           N L+S Y K   + +   VF  M  RD ++WNS+++ Y      +++ + +N M   G  
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID---------FDHNIRTGLM----- 322
            L R    +++ L +    + L  Q+H  V+K G            D   +TGL+     
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198

Query: 323 ----------VAYS-------KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
                     V Y+       +C ++ED+ ++F  M+E KD +SWTAMI+G  QNG    
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQE-KDSISWTAMIAGFTQNGLDRE 257

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLN 421
           A++ F +M  E +  + +T+  +LTA   V   Q    VHA+II+T+Y+ +  VG+AL++
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVD 317

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            Y K   +  A  VF  ++ K++V+W+AML GY Q G +E AVKI+  + + G++P++FT
Sbjct: 318 MYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFT 377

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
             SVI++C A  A++E+G QFH  ++ + L + + VS+ALVT+Y K G+IE +  +F   
Sbjct: 378 LGSVISSC-ANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM 436

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
              D VSW +++ GYAQ G   + L +F+ M     + D +TFIGV++AC+ AGLV +G 
Sbjct: 437 SYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGN 496

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
           Q F+ M+ EH I P  +HY+CM+DL+SRAG LE+A   IN+MPF+  A  W ++L++CR 
Sbjct: 497 QIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRF 556

Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                        L+ L+PH++A Y+LLS++YAA G W+E A +RK M D+ ++KE G S
Sbjct: 557 HRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCS 616

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           WI+ KN+ + F A D S+P S+QIYS+LE+L+ ++   GY PD + VL D+DD  K  +L
Sbjct: 617 WIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKML 676

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
           + HSE+LAIAFGL+  P G P+++VKNLRVCGDCH   K ISK+ +R+I+VRD  RFH F
Sbjct: 677 NHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLF 736

Query: 828 KEGLCSCGDYW 838
           K+G CSCGD+W
Sbjct: 737 KDGRCSCGDFW 747



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 253/527 (48%), Gaps = 75/527 (14%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++HC  +K+    ++ +  +LV  Y + + +   RRVFD M + N+ SW +LLS Y++ 
Sbjct: 29  KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88

Query: 158 KMNDRVLELFHRMQ--------------------VEGIKP------------NSFTFSTV 185
                +  +FH M                     ++ +K             N    ST+
Sbjct: 89  ACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTM 148

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV--------------- 230
           L + + +G V   +QVH  V+K G +    V + L+ MY K+ +V               
Sbjct: 149 LILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNV 208

Query: 231 ----------------RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
                            D+R +F  M+++DSI+W +M+AG+  N L  EA + F  M L 
Sbjct: 209 VMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLE 268

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKME 332
             E+ + TF SV+  C     L+  +Q+H+ +++   D+  NI  G  L+  Y KC  ++
Sbjct: 269 NLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT--DYQDNIFVGSALVDMYCKCKSIK 326

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A  +F  M   K+VVSWTAM+ G+ QNG  + AV  FC M   G+ P+ FT   ++++ 
Sbjct: 327 SAETVFRKM-NCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSC 385

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             ++      Q H   + +      +V  AL+  Y K G ++++ ++F  +   D V+W+
Sbjct: 386 ANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWT 445

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+++GYAQ G     ++++  + + G KP++ TF  V++AC+  +  V++G Q     IK
Sbjct: 446 ALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSR-AGLVQKGNQIFESMIK 504

Query: 509 A-KLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMI 553
             ++       + ++ ++S+ G +E A + + K     D + W S++
Sbjct: 505 EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLL 551



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 222/466 (47%), Gaps = 53/466 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYC-RDSLHQ--EALNLFL-----GIRRLGLPLFGSTLSS 83
           + +F   P R+ V +N L+  Y  R  L Q  +A NL L      + R+ L    ST+  
Sbjct: 95  ERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIAL----STMLI 150

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY-------------------- 123
           +    GC+     G QVH   VK GF   V V + LVD+Y                    
Sbjct: 151 LASKQGCVH---LGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKN 207

Query: 124 -----------MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
                      MR + +ED R++F DM E + +SWT++++G+ +N ++   ++LF  M++
Sbjct: 208 VVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRL 267

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
           E ++ + +TF +VL        +    QVH  +I+   +    V +AL+ MY K K ++ 
Sbjct: 268 ENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKS 327

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  VF  M  ++ ++W +M+ GY  N    EA + F +M   G E    T  SVI  CA 
Sbjct: 328 AETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCAN 387

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              L    Q H + L +G+     +   L+  Y KCG +ED+ ++FS M  + D VSWTA
Sbjct: 388 LASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYV-DEVSWTA 446

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           ++SG+ Q G  +  +  F  M   G +P+  T+  +L+A       Q    I ++  ++ 
Sbjct: 447 LVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEH 506

Query: 413 FSVG-----TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLA 452
             +      T +++ + + G L+EA K + ++    D + W+++L+
Sbjct: 507 RIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 2/227 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  +++F +   +N V +  +L  Y ++   +EA+ +F  ++  G+     TL SV+ +C
Sbjct: 326 KSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSC 385

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G Q HC  + SG    + VS +LV LY +  ++ED  R+F +M+  + VSWT
Sbjct: 386 ANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWT 445

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +L+SGYA+    +  L LF  M   G KP+  TF  VL   +  G+V    Q+   +IK 
Sbjct: 446 ALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKE 505

Query: 209 GGEV-VTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
              + +      +I ++ ++  + +AR   + M    D+I W S+++
Sbjct: 506 HRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 48/312 (15%)

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           C + +    P  F  + +++A            +     +++      LL++Y K   L 
Sbjct: 33  CHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLP 92

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINAC 489
           E  +VF  +  +D+V+W+++++ YA  G    +VK Y  +   G    N    S+++   
Sbjct: 93  EMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTML-IL 151

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG-------------------- 529
            +    V  G Q H   +K    + + V S LV MYSK G                    
Sbjct: 152 ASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMY 211

Query: 530 -----------NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
                       IE + ++F   +++D +SW +MI G+ Q+G  ++A+++F+EMR ++LE
Sbjct: 212 NTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLE 271

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-------SCMVDLYSRAG 631
            D  TF  V+TAC     + EG+Q         H Y     Y       S +VD+Y +  
Sbjct: 272 MDQYTFGSVLTACGGVMALQEGKQV--------HAYIIRTDYQDNIFVGSALVDMYCKCK 323

Query: 632 MLEKAMDIINRM 643
            ++ A  +  +M
Sbjct: 324 SIKSAETVFRKM 335



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K+ H   IKA  N  + + + LV+ Y+K   I  A  VF +  +R+L SWN+++  Y++ 
Sbjct: 29  KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKL 88

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
               +   VF  M  +D+    +++  +I+A    G + +  + +++M+           
Sbjct: 89  ACLPEMERVFHAMPTRDM----VSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIA 144

Query: 620 YSCMVDLYSRAGMLEKAMDI 639
            S M+ L S+ G +   + +
Sbjct: 145 LSTMLILASKQGCVHLGLQV 164


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 282/733 (38%), Positives = 430/733 (58%), Gaps = 56/733 (7%)

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           ARN+   +V +L  R+      P +F ++ ++      G +  A  V   + +       
Sbjct: 18  ARNRA--QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPN----L 71

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
              N L+S Y K   ++D + VFD M + D ++WNS+++GY  N L  E+   +N M   
Sbjct: 72  FSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKD 131

Query: 275 GA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           G+  L R TF +++ L +    + L RQ+H Q+ K G      + + L+  Y+K G + D
Sbjct: 132 GSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIND 191

Query: 334 ASKIFSMMREM------------------------------KDVVSWTAMISGHLQNGAI 363
           A++IF  + E                               KD +SWT +I+G  QNG  
Sbjct: 192 ANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLF 251

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTAL 419
             AV+ F +M  EG   + FT+  +LTA           Q+HA+II+T+Y+ +  VG+AL
Sbjct: 252 KEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSAL 311

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           L+ Y K   +  A  VF  +  K++++W+AML GY Q G +E AV+I+  +    + P++
Sbjct: 312 LDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDD 371

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           FT  SVI++C A  A++E+G QFH  ++ + L   + VS+AL+T+Y K G++E A ++F 
Sbjct: 372 FTLGSVISSC-ANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFH 430

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
             + RD VSW +++ GYAQ G   + + +F+ M    +  DG+TF+GV++AC+ AGLV++
Sbjct: 431 EMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEK 490

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G  YF+ MV EH I P  +HY+CM+DL SRAG LE+A + IN+MPF+  A  W T+L++C
Sbjct: 491 GYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSC 550

Query: 660 RLIS--------------LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           RL                L+P + A Y+LLS++YAA G W + A++RK M +  VKKE G
Sbjct: 551 RLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPG 610

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
           +SWI+ KNK + F A D S P S+QIY+KLE L  ++ + GY PD S+VL D++   K  
Sbjct: 611 HSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIK 670

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
           +L+ HSE+LAIAFGL+  P G  +++VKNLRVCGDCH   K IS++ +R+I+VRD  RFH
Sbjct: 671 MLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFH 730

Query: 826 HFKEGLCSCGDYW 838
            FK+G+CSCGD+W
Sbjct: 731 LFKDGVCSCGDFW 743



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 237/477 (49%), Gaps = 44/477 (9%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-I 175
            +L+  Y +   ++D +RVFD M   +VVSW SLLSGYA N +    + +++ M  +G +
Sbjct: 75  NTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSV 134

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
             N  TFST+L + ++ G V    Q+H  + K G +    V + L+ MY K+  + DA  
Sbjct: 135 NLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANR 194

Query: 236 V-------------------------------FDGMEDRDSITWNSMVAGYVTNELHMEA 264
           +                               FD M ++DSI+W +++ G   N L  EA
Sbjct: 195 IFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEA 254

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LM 322
            + F  MG+ G  + + TF SV+  C     L   +Q+H+ +++   D+  NI  G  L+
Sbjct: 255 VDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRT--DYQDNIFVGSALL 312

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KC  ++ A  +F  MR  K+V+SWTAM+ G+ QNG  + AV  FC M R  + P+ 
Sbjct: 313 DMYCKCRNVKYAEAVFRKMRH-KNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDD 371

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           FT   ++++   ++      Q H   + +      +V  AL+  Y K G L+ A ++F  
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHE 431

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  +D V+W+A+++GYAQ G     + ++  + + G+ P+  TF  V++AC+  +  VE+
Sbjct: 432 MKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSR-AGLVEK 490

Query: 499 GKQFHACSIKA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           G  +  C +K  ++       + ++ + S+ G +E A     +     D + W +++
Sbjct: 491 GYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLL 547



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 220/478 (46%), Gaps = 49/478 (10%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVL 85
           Y +  Q +FD  P  + V +N LL  Y  + L  E++ ++ + ++   + L   T S++L
Sbjct: 86  YLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTML 145

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
                      GRQ+H +  K G+   + V + LVD+Y +T  + D  R+F+++ E N+V
Sbjct: 146 ILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIV 205

Query: 146 -------------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEG 174
                                          SWT++++G  +N +    ++ F  M +EG
Sbjct: 206 VYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEG 265

Query: 175 IKPNSFTFSTVL----GVLA-DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
              + FTF +VL    G LA DEG      Q+H  +I+   +    V +AL+ MY K + 
Sbjct: 266 FCMDQFTFGSVLTACGGFLALDEG-----KQIHAYIIRTDYQDNIFVGSALLDMYCKCRN 320

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           V+ A AVF  M  ++ I+W +M+ GY  N    EA   F +M          T  SVI  
Sbjct: 321 VKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISS 380

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           CA    L    Q H Q L +G+     +   L+  Y KCG +E A ++F  M+ ++D VS
Sbjct: 381 CANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMK-IRDEVS 439

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY 409
           WTA++SG+ Q G  +  ++ F  M   G+ P+G T+  +L+A       +   H  +   
Sbjct: 440 WTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMV 499

Query: 410 EKSFSVG-----TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
           ++          T +++   + G L+EA   + ++    D + W+ +L+     G+ E
Sbjct: 500 KEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLE 557



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 211/428 (49%), Gaps = 70/428 (16%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF---- 338
           + + +K C   +     ++LH ++++   + +  +   L+  Y K G +++A  +F    
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 339 -----------------SMMREMK---------DVVSWTAMISGHLQNGAIDLAVNFFCQ 372
                              +++M+         DVVSW +++SG+  NG I  +V  +  
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 373 MTREG-VRPNGFTYS--IILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           M ++G V  N  T+S  +IL++         Q+H  I K  Y+    VG+ L++ Y K G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 428 ILDEAAKVFELIDEKDIV-------------------------------AWSAMLAGYAQ 456
            +++A ++FE I EK+IV                               +W+ ++ G  Q
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G  + AV  ++++  EG   ++FTF SV+ AC     A+++GKQ HA  I+    + + 
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGG-FLALDEGKQIHAYIIRTDYQDNIF 306

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V SAL+ MY K  N++ A  VF++ R ++++SW +M+ GY Q+G++++A+ +F +M+R +
Sbjct: 307 VGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI-YPTMEHYSCMVDLYSRAGMLEK 635
           +  D  T   VI++C +   ++EG Q+    +    I + T+   + ++ LY + G LE 
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVS--NALITLYGKCGSLEH 424

Query: 636 AMDIINRM 643
           A  + + M
Sbjct: 425 AHQLFHEM 432



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 16/353 (4%)

Query: 22  LRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGS 79
           LR  F  + +Q LFD  P+++ + +  ++    ++ L +EA++ F  +GI    +  F  
Sbjct: 215 LRCRFIVEAEQ-LFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQF-- 271

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T  SVL  CG       G+Q+H   +++ +  ++ V ++L+D+Y +  NV+    VF  M
Sbjct: 272 TFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKM 331

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              NV+SWT++L GY +N  ++  + +F  MQ   I P+ FT  +V+   A+   +    
Sbjct: 332 RHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGA 391

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q H   + +G     +V NALI++Y K   +  A  +F  M+ RD ++W ++V+GY    
Sbjct: 392 QFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFG 451

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR- 318
              E    F  M   G      TFV V+  C+    +         ++K     +H I  
Sbjct: 452 KANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVK-----EHRITP 506

Query: 319 -----TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                T ++   S+ G++E+A    + M    D + W  ++S    NG +++ 
Sbjct: 507 IPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIG 559


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 281/823 (34%), Positives = 454/823 (55%), Gaps = 21/823 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+  P RN V +  L+  Y      +E ++++ G+R  G+    +++S V+ +CG L
Sbjct: 97  RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLL 156

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GRQ+  + VKSG    + V  SL+ +     NV+    +FD M+E + +SW S+ 
Sbjct: 157 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 216

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + YA+N   +    +F  M+    + NS T ST+L VL           +H +V+K G +
Sbjct: 217 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 276

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V  VCN L+ MY  +    +A  VF  M  +D I+WNS++A +V +   ++A     +M
Sbjct: 277 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 336

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G  +   TF S +  C T       R LH  V+ +G+ ++  I   L+  Y K G+M
Sbjct: 337 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 396

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            ++ ++   M   +DVV+W A+I G+ ++   D A+  F  M  EGV  N  T   +L+A
Sbjct: 397 SESRRVLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 455

Query: 392 QPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
                        +HA+I+   +E    V  +L+  Y K G L  +  +F  +D ++I+ 
Sbjct: 456 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 515

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AMLA  A  G  E  +K+  ++ S GV  ++F+FS  ++A  A  A +E+G+Q H  +
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA-AAKLAVLEEGQQLHGLA 574

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +K    +   + +A   MYSK G I    ++      R L SWN +I    +HG+ ++  
Sbjct: 575 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 634

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             F EM    ++   +TF+ ++TAC+H GLVD+G  Y+D++  +  + P +EH  C++DL
Sbjct: 635 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 694

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
             R+G L +A   I++MP   +  VWR++LA+C+              L  L+P D ++Y
Sbjct: 695 LGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY 754

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VL SNM+A TG W++   VRK M  + +KK+   SW+++K+K  SF  GD +HPQ+ +IY
Sbjct: 755 VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIY 814

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           +KLE++   +K++GY  DTS  LQD D+E KE  L  HSERLA+A+ L++TP G+ ++I 
Sbjct: 815 AKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 874

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           KNLR+C DCH+V K +S++  R IV+RD  RFHHF+ GL   G
Sbjct: 875 KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 184/635 (28%), Positives = 330/635 (51%), Gaps = 28/635 (4%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG---CLFDHV 95
           P RN V +N ++    R  L+ E +  F  +  LG+      ++S++  CG    +F   
Sbjct: 2   PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE- 60

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G QVH    KSG   DV VST+++ LY     V   R+VF++M + NVVSWTSL+ GY+
Sbjct: 61  -GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEV 212
                + V++++  M+ EG+  N  + S V+   G+L DE +     Q+   V+K+G E 
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL---GRQIIGQVVKSGLES 176

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             +V N+LISM      V  A  +FD M +RD+I+WNS+ A Y  N    E+F  F+ M 
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               E+  +T  +++ +       +  R +H  V+K G D    +   L+  Y+  G+  
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A+ +F  M   KD++SW ++++  + +G    A+   C M   G   N  T++  L A 
Sbjct: 297 EANLVFKQM-PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                F+    +H  ++ +    +  +G AL++ Y K G + E+ +V   +  +D+VAW+
Sbjct: 356 FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A++ GYA+  D + A+  ++ +  EGV  N  T  SV++AC  P   +E+GK  HA  + 
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           A   +   V ++L+TMY+K G++ S+ ++F     R++++WN+M+   A HGH ++ L++
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 535

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVD 625
             +MR   +  D  +F   ++A     +++EGQQ   + V    EH  +     ++   D
Sbjct: 536 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI----FNAAAD 591

Query: 626 LYSRAGMLEKAMDIINRMPFAASATV--WRTVLAA 658
           +YS+ G +    +++  +P + + ++  W  +++A
Sbjct: 592 MYSKCGEIG---EVVKMLPPSVNRSLPSWNILISA 623



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 203/410 (49%), Gaps = 8/410 (1%)

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL-RL 298
           M  R+ ++WN+M++G V   L++E  E F  M   G + +     S++  C  +  + R 
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             Q+H  V K+G+  D  + T ++  Y   G +  + K+F  M + ++VVSWT+++ G+ 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVGYS 119

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKSFS 414
             G  +  ++ +  M  EGV  N  + S+++++   +       Q+   ++K+  E   +
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V  +L++     G +D A  +F+ + E+D ++W+++ A YAQ G  E + +I+  +    
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
            + N  T S++++         + G+  H   +K   ++ +CV + L+ MY+  G    A
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQ-KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
           + VFK+   +DL+SWNS++  +   G +  AL +   M       + +TF   + AC   
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
              ++G+    ++V     Y  +   + +V +Y + G + ++  ++ +MP
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP 407



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 128/257 (49%), Gaps = 28/257 (10%)

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           ++ V+W+ M++G  ++G     ++ +R++   G+KP+ F  +S++ AC    +   +G Q
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H    K+ L + + VS+A++ +Y   G +  + +VF+    R++VSW S++ GY+  G 
Sbjct: 64  VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE---GQQYFDIMVNEHHIYPTME 618
            ++ ++++K MR + +  +  +   VI++C   GL+ +   G+Q    +V +  +   + 
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVV-KSGLESKLA 179

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNM 678
             + ++ +    G ++ A  I ++M    + + W ++ AA                    
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAA-------------------- 218

Query: 679 YAATGHWQERARVRKLM 695
           YA  GH +E  R+  LM
Sbjct: 219 YAQNGHIEESFRIFSLM 235


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 293/833 (35%), Positives = 465/833 (55%), Gaps = 37/833 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F R   R+   +  ++  Y      + A+ +F  +++ G+     T  +VLK C  L
Sbjct: 82  EEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARL 141

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR +H   V+SG      ++  L+ +Y     V     +F+ M E ++VSW + +
Sbjct: 142 GDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAI 200

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +  A++      LELF RMQ+EG++P   T    L V A    +  A  +H +V ++G E
Sbjct: 201 AANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLE 257

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  AL S Y +   +  A+ VFD   +RD ++WN+M+  Y  +    EA   F  M
Sbjct: 258 QTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G   ++ T V+    C++   LR  R +H   L+ G+D D  +   L+  Y++CG  
Sbjct: 318 LHEGISPSKVTLVNASTGCSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSP 374

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E+A  +F   R   + VSW  MI+G  Q G +  AV  F +M  EG+ P   TY  +L A
Sbjct: 375 EEARHLFK--RIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432

Query: 392 --------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE---LID 440
                   +      ++H+ I+   Y    ++GTA++  Y   G +DEAA  F+   + D
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D+V+W+A+++  +Q G  + A+  +R++   GV PN+ T  +V++AC A +AA+ +G+
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDAC-AGAAALTEGE 551

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQH 559
             H     + + + L V++AL +MY + G++ESA E+F++   +RD+V +N+MI  Y+Q+
Sbjct: 552 IVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQN 611

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G   +AL++F  M+++    D  +F+ V++AC+H GL DEG + F  M   + I P+ +H
Sbjct: 612 GLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDH 671

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y+C VD+  RAG L  A ++I  M    +  VW+T+L ACR              +  L 
Sbjct: 672 YACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELD 731

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D + YV+LSN+ A  G W E A VR  M  R ++KEAG SWIE+K++ + F+AGD SH
Sbjct: 732 PGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSH 791

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+S +IY +LE L   +++ GY PDT  VL+ +D+  KE +L QHSERLAIA G++++  
Sbjct: 792 PRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST 851

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              ++++KNLRVC DCH   K ISK+  ++IVVRDT+RFHHF +G CSCGDYW
Sbjct: 852 D-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 160/576 (27%), Positives = 299/576 (51%), Gaps = 30/576 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR++H   V  G   ++     L+ LY++  ++ D   VF  +   +  SWT++++ Y  
Sbjct: 48  GRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTE 105

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +    R + +FHRMQ EG++ ++ TF  VL   A  G ++    +H  ++++G +  + +
Sbjct: 106 HGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVL 165

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N L+ +Y     V  A  +F+ ME RD ++WN+ +A    +     A E F  M L G 
Sbjct: 166 ANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGV 224

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
              R T V  + +CAT   +R A+ +H  V ++G++    + T L  AY++ G +  A +
Sbjct: 225 RPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKE 281

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F    E +DVVSW AM+  + Q+G +  A   F +M  EG+ P+  T   ++ A    S
Sbjct: 282 VFDRAAE-RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT---LVNASTGCS 337

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             +    +H   ++   ++   +G ALL+ Y + G  +EA  +F+ I   + V+W+ M+A
Sbjct: 338 SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIA 396

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA---PSAAVEQGKQFHACSIKA 509
           G +Q G  + AV++++++  EG+ P   T+ +++ A  +    + A+ +G++ H+  +  
Sbjct: 397 GSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSC 456

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKR---QRKRDLVSWNSMICGYAQHGHTKKAL 566
              +   + +A+V MY+  G I+ A+  F+R   + + D+VSWN++I   +QHGH K+AL
Sbjct: 457 GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRAL 516

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSC 622
             F+ M    +  + IT + V+ AC  A  + EG+     +V++H  +  ME      + 
Sbjct: 517 GFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGE-----IVHDHLRHSGMESNLFVATA 571

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +  +Y R G LE A +I  ++       ++  ++AA
Sbjct: 572 LASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 288/835 (34%), Positives = 459/835 (54%), Gaps = 40/835 (4%)

Query: 26  FYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVL 85
           F   + + LFD  P R+   +  L+  Y +   H+EAL LF  +   G      TLS+ L
Sbjct: 64  FGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTAL 123

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           ++C  L +   G +      KSGF  +  + ++L+D Y +    ++  RVF+ MN  ++V
Sbjct: 124 RSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIV 183

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI-VATAVQVHTM 204
           SWT ++S +       + L+L+HRM   G+ PN FTF  +L   +  G+     V  H M
Sbjct: 184 SWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLM 243

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           + +   E+   +  AL+ MY K + + DA  V     + D   W ++++G+  +    EA
Sbjct: 244 MWRI--ELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREA 301

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F+ M  +G      T+  ++  C++   L L +Q+HS+V+  G++ D ++   L+  
Sbjct: 302 ITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDM 361

Query: 325 YSKCGKM-EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
           Y KC  M EDA + F  +    +V+SWT++I+G  ++G  + ++  F  M   GVRPN F
Sbjct: 362 YMKCSNMIEDAVRAFRGIAS-PNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSF 420

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T S IL A   +       ++H +IIK N +    VG AL++AY   G++D+A  V  ++
Sbjct: 421 TLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMM 480

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             +D++ ++++     Q G+ E A+ I   +  + V+ + F+ +S ++A  A    +E G
Sbjct: 481 KHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSA-AAGIPIMETG 539

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           KQ H  S+K+ L + + VS+ LV +Y K G I  A   F    + D VSWN +I G A +
Sbjct: 540 KQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASN 599

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           GH   AL  F++MR   +E D IT + V+ AC+H GLVD G  YF  M  +H I P ++H
Sbjct: 600 GHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDH 659

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQ 665
           Y C+VDL  RAG LE+AM++I  MPF   A +++T+L AC+L              + L 
Sbjct: 660 YVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELD 719

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D A YVLL+N+Y  +G  +   + R++M +R V+K  G SW+E +N  + F AGD SH
Sbjct: 720 PSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSH 779

Query: 726 PQSNQIYSKLEELSTRLKDAG--YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
           PQ  +I+ K+E L  + ++ G  Y+ + +              L+ HSE+LA+AFGL++T
Sbjct: 780 PQIGKIHEKIESLIAQFRNQGIWYQENRA--------------LAHHSEKLAVAFGLIST 825

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P  AP++I+KN+R+C DCH  I  +++L  R+I+VRD NRFH FK+G CSC  YW
Sbjct: 826 PPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 283/547 (51%), Gaps = 13/547 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  +H   +K GF  D+ +S +L+ LY +   V + R++FD+M   +V SWT L+S Y +
Sbjct: 34  GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGK 93

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
              ++  LELF  M + G  PN FT ST L   +         +   +V K+G +    +
Sbjct: 94  IGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVL 153

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            +ALI  Y K    ++A  VF+ M + D ++W  MV+ +V      +A + ++ M   G 
Sbjct: 154 GSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGV 213

Query: 277 ELTRSTFVSVIKLCATTKELRL--ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                TFV   KL A +  L L   + +H+ ++   I+ +  ++T L+  Y KC  +EDA
Sbjct: 214 APNEFTFV---KLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDA 270

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            K+  +  E  DV  WTA+ISG  Q+     A+  F +M   GV PN FTYS IL A  +
Sbjct: 271 VKVSKLTLEY-DVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSS 329

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSA 449
           +       Q+H+ ++    E   SVG +L++ Y+K   ++++A + F  I   ++++W++
Sbjct: 330 ILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTS 389

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++AG+++ G  E ++K++  +   GV+PN FT S+++ AC     ++ Q ++ H   IK 
Sbjct: 390 LIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC-GTIKSLTQTRKLHGYIIKN 448

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             +N + V +ALV  Y+  G ++ A  V    + RD++++ S+     Q G+ + AL + 
Sbjct: 449 NADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNII 508

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             M + D+  DG +    ++A     +++ G+Q     V +  +   +   + +VDLY +
Sbjct: 509 THMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSV-KSGLGSWISVSNGLVDLYGK 567

Query: 630 AGMLEKA 636
            G +  A
Sbjct: 568 CGCIHDA 574



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 243/453 (53%), Gaps = 7/453 (1%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           V   + +H+ +IK G +    + N L+S+Y K   V +AR +FD M  RD  +W  +++ 
Sbjct: 31  VRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSA 90

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           Y     H EA E F++M ++G      T  + ++ C+  +E     +  + V K+G D +
Sbjct: 91  YGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSN 150

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             + + L+  YSKCG  ++A ++F  M    D+VSWT M+S  ++ G+   A+  + +M 
Sbjct: 151 PVLGSALIDFYSKCGCTQEAYRVFEYMNN-GDIVSWTMMVSSFVEAGSWSQALQLYHRMI 209

Query: 375 REGVRPNGFTYSIILTAQPAVS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           + GV PN FT+  +L A   +       VHAH++    E +  + TAL++ Y K   +++
Sbjct: 210 QTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIED 269

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A KV +L  E D+  W+A+++G+ Q      A+  + ++ + GV PN FT+S ++NAC++
Sbjct: 270 AVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSS 329

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN-IESASEVFKRQRKRDLVSWN 550
              A++ GKQ H+  + A L N + V ++LV MY K  N IE A   F+     +++SW 
Sbjct: 330 I-LALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWT 388

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           S+I G+++HG  +++++VF  M+   +  +  T   ++ AC     + + ++    ++  
Sbjct: 389 SLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKN 448

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +     +   + +VD Y+  GM++ A  + + M
Sbjct: 449 NADNDVVVG-NALVDAYAGLGMVDDAWHVTSMM 480



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 4/179 (2%)

Query: 466 IYRQLTSEGVKPNEFTF-SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           I+R   S+     E++    +++ C   S +V  G   H+  IK      + +S+ L+++
Sbjct: 2   IWRTTVSKIPSKIEYSLLKDIVSFCN--SRSVRDGICIHSPIIKMGFQEDMFLSNNLLSL 59

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K   +  A ++F     RD+ SW  ++  Y + G+ ++ALE+F  M       +  T 
Sbjct: 60  YGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTL 119

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
              + +C+     + G + F  +V +          S ++D YS+ G  ++A  +   M
Sbjct: 120 STALRSCSALREFNHGTR-FQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM 177


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 262/670 (39%), Positives = 416/670 (62%), Gaps = 50/670 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA- 276
           N ++S Y KS  +   + +F  M +RD ++WNS+++GYV     +EA +T+N+M   G  
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            L R TF +++ L ++   + L RQ+H Q++K G      + + L+  Y+K G +  AS+
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 337 IFSMMREM------------------------------KDVVSWTAMISGHLQNGAIDLA 366
           +F  ++E                               +D +SWT MI+G +QNG    A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
           ++ F  M +EG+  + +T+  +LTA   +       ++H  II++ Y  +  VG+AL++ 
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K   +  A  VF+ +  K++V+W+AML GY Q G +E AV+++  +   G++P++FT 
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTL 374

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            SVI++C A  A++E+G QFH  ++ + L + + VS+AL+T+Y K G+IE ++++F    
Sbjct: 375 GSVISSC-ANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS 433

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            RD VSW +++ GYAQ G   + +++F+ M  Q L+ D +TFI V++AC+ AGLV+ GQQ
Sbjct: 434 FRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQ 493

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL- 661
           YF+ M+ +H I P  +HY+CM+DL+ RAG LE+A + IN+MPF+  +  W T+L++CRL 
Sbjct: 494 YFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLY 553

Query: 662 -------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                        + L P + A Y+LLS++YAA G W   A++R+ M ++  +KE G+SW
Sbjct: 554 GNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSW 613

Query: 709 IEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILS 768
           I+ K+K Y F A D S P S+QIY++LE+L+ ++ + GY PD S VL D++D  K  +L+
Sbjct: 614 IKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLN 673

Query: 769 QHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            HSE+LAIAFGL+  P G P+++VKNLRVCGDCH   K ISK+ +R+I+VRD  RFH FK
Sbjct: 674 HHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFK 733

Query: 829 EGLCSCGDYW 838
           +G CSCGD+W
Sbjct: 734 DGTCSCGDFW 743



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 274/555 (49%), Gaps = 82/555 (14%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++HC  +KS    +  +  +L++ Y +  N+   R VFD M + N  SW ++LS Y+++
Sbjct: 25  KKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKS 84

Query: 158 KMNDRVLELFHRMQ--------------------VEGIKP------------NSFTFSTV 185
                + E+F  M                     VE +K             N  TFST+
Sbjct: 85  GDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTM 144

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY--------------------- 224
           L +++ +G V    Q+H  ++K G      V ++L+ MY                     
Sbjct: 145 LLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNV 204

Query: 225 ----------LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
                     L+S MV+D++ +F GM++RDSI+W +M+ G + N L  EA + F +M   
Sbjct: 205 VMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQE 264

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKME 332
           G  + + TF SV+  C   + L+  +++H+ ++++G  ++HN+  G  L+  Y KC  + 
Sbjct: 265 GMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSG--YNHNVFVGSALVDMYCKCRSVR 322

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A  +F  M   K+VVSWTAM+ G+ QNG  + AV  FC M R G+ P+ FT   ++++ 
Sbjct: 323 YAEAVFKRMAN-KNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSC 381

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             ++      Q H   + +      +V  AL+  Y K G ++++ ++F+ +  +D V+W+
Sbjct: 382 ANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWT 441

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+++GYAQ G     + ++ ++  +G+KP+  TF +V++AC+  +  VE+G+Q+    +K
Sbjct: 442 ALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSR-AGLVERGQQYFESMLK 500

Query: 509 AKLNNALCVS---SALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHT-- 562
              +  +  S   + ++ ++ + G +E A   + K     D + W +++     +G+   
Sbjct: 501 D--HGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEI 558

Query: 563 -KKALEVFKEMRRQD 576
            K A E   E+  Q+
Sbjct: 559 GKWAAESLLELDPQN 573



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/472 (28%), Positives = 232/472 (49%), Gaps = 47/472 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEY-CRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVL---K 86
           Q +F   P R+ V +N L+  Y C  S+  EA+  +  + + G L L   T S++L    
Sbjct: 91  QEIFSIMPNRDGVSWNSLISGYVCYGSV-VEAVKTYNSMMKDGVLNLNRITFSTMLLLVS 149

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY----------------------- 123
           + GC+     GRQ+H + VK GF   V V +SLVD+Y                       
Sbjct: 150 SQGCV---DLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVM 206

Query: 124 --------MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
                   +R+  V+D +R+F  M E + +SWT++++G  +N +    ++LF  M+ EG+
Sbjct: 207 YNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGM 266

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
             + +TF +VL        +    ++HT++I++G      V +AL+ MY K + VR A A
Sbjct: 267 AMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEA 326

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           VF  M +++ ++W +M+ GY  N    EA   F +M   G E    T  SVI  CA    
Sbjct: 327 VFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLAS 386

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           L    Q H Q L +G+     +   L+  Y KCG +ED++++F  M   +D VSWTA++S
Sbjct: 387 LEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM-SFRDEVSWTALVS 445

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
           G+ Q G  +  ++ F +M  +G++P+  T+  +L+A           Q    ++K +   
Sbjct: 446 GYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGII 505

Query: 412 SFSVG-TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
            FS   T +++ + + G L+EA   + ++    D + W+ +L+     G+ E
Sbjct: 506 PFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEE 557



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 169/328 (51%), Gaps = 1/328 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LF    +R+ + +  ++    ++ L  EA++LF  +R+ G+ +   T  SVL  C
Sbjct: 221 KDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTAC 280

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L     G+++H   ++SG+  +V V ++LVD+Y +  +V     VF  M   NVVSWT
Sbjct: 281 GGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWT 340

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++L GY +N  ++  + +F  MQ  GI+P+ FT  +V+   A+   +    Q H   + +
Sbjct: 341 AMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVS 400

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G     +V NALI++Y K   + D+  +FD M  RD ++W ++V+GY       E  + F
Sbjct: 401 GLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLF 460

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSK 327
             M + G +    TF++V+  C+    +   +Q    +LK+ GI    +  T ++  + +
Sbjct: 461 ERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGR 520

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMIS 355
            G++E+A    + M    D + W  ++S
Sbjct: 521 AGRLEEAKNFINKMPFSPDSIGWATLLS 548


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 280/826 (33%), Positives = 459/826 (55%), Gaps = 24/826 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD   +R    +N L+  +     + EA+ L+  +R LG+ +   T  SVLK CG L +
Sbjct: 101 VFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGE 160

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD--MNESNVVSWTSLL 151
              G ++H   VK G+   V V  +L+ +Y +  ++   R +FD   M + + VSW S++
Sbjct: 161 SRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S +         L LF RMQ  G+  N++TF   L  + D   V   + +H  V+K+   
Sbjct: 221 SAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHF 280

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NALI+MY K   + DA  VF+ M  RD ++WN++++G V NEL+ +A   F +M
Sbjct: 281 ADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDM 340

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G +  + + +++I     +  L   +++H+  ++NG+D +  I   L+  Y+KC  +
Sbjct: 341 QNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCV 400

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +     F  M E KD++SWT +I+G+ QN     A+N F ++  +G+  +      +L A
Sbjct: 401 KYMGHAFECMHE-KDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRA 459

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       ++H ++ K +      +  A++N Y + G +D A + FE I  KDIV+W
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSW 518

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++M+      G    A++++  L    ++P+     S ++A TA  +++++GK+ H   I
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSA-TANLSSLKKGKEIHGFLI 577

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +        ++S+LV MY+  G +E++ ++F   ++RDL+ W SMI     HG   KA+ 
Sbjct: 578 RKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIA 637

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +FK+M  Q++  D ITF+ ++ AC+H+GL+ EG+++F+IM   + + P  EHY+CMVDL 
Sbjct: 638 LFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLL 697

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
           SR+  LE+A   +  MP   S+ +W  +L AC               L+     +S  Y 
Sbjct: 698 SRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYA 757

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           L+SN++AA G W +   VR  M    +KK  G SWIEV NK ++F+A D SHPQ++ IY 
Sbjct: 758 LISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYL 817

Query: 734 KLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           KL + +  L K  GY   T +V  ++ +E K  +L  HSERLA+ +GL+ TP G  ++I 
Sbjct: 818 KLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRIT 877

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+C DCHT  K+ S++ +R +VVRD NRFHHF+ GLCSCGD+W
Sbjct: 878 KNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 282/546 (51%), Gaps = 12/546 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H   +KS  +    ++T LV +Y +  ++ D  +VFD+M+E  + SW +L+  +  
Sbjct: 65  GQQLHALLLKSHLS--AFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVS 122

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +      +EL+  M+V G+  ++ TF +VL      G      ++H + +K G      V
Sbjct: 123 SGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFV 182

Query: 217 CNALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           CNALI+MY K   +  AR +FDG  ME  D+++WNS+++ +V     +EA   F  M   
Sbjct: 183 CNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEV 242

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G      TFV+ ++       ++L   +H  VLK+    D  +   L+  Y+KCG+MEDA
Sbjct: 243 GVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDA 302

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            ++F  M   +D VSW  ++SG +QN     A+N+F  M   G +P+  +   ++ A   
Sbjct: 303 GRVFESML-CRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGR 361

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                   +VHA+ I+   + +  +G  L++ Y K   +      FE + EKD+++W+ +
Sbjct: 362 SGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTI 421

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +AGYAQ      A+ ++R++  +G+  +     SV+ AC+   +     ++ H    K  
Sbjct: 422 IAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR-NFIREIHGYVFKRD 480

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L + + + +A+V +Y + G+I+ A   F+  R +D+VSW SMI     +G   +ALE+F 
Sbjct: 481 LADIM-LQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFY 539

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            +++ +++ D I  I  ++A  +   + +G++    ++ +   +      S +VD+Y+  
Sbjct: 540 SLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACC 598

Query: 631 GMLEKA 636
           G +E +
Sbjct: 599 GTVENS 604



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 181/350 (51%), Gaps = 11/350 (3%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++ LC   K L   +QLH+ +LK+       + T L++ Y KCG + DA K+F  M E +
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSE-R 108

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVH 401
            + SW A++   + +G    A+  +  M   GV  +  T+  +L A  A+       ++H
Sbjct: 109 TIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE--LIDEKDIVAWSAMLAGYAQIGD 459
              +K  Y +   V  AL+  Y K G L  A  +F+  +++++D V+W+++++ +   G+
Sbjct: 169 GVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGN 228

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
              A+ ++R++   GV  N +TF + +     PS  V+ G   H   +K+     + V++
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS-FVKLGMGIHGAVLKSNHFADVYVAN 287

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           AL+ MY+K G +E A  VF+    RD VSWN+++ G  Q+     AL  F++M+    + 
Sbjct: 288 ALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKP 347

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           D ++ + +I A   +G + +G++     +  + +   M+  + +VD+Y++
Sbjct: 348 DQVSVLNLIAASGRSGNLLKGKEVHAYAI-RNGLDSNMQIGNTLVDMYAK 396


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 275/752 (36%), Positives = 429/752 (57%), Gaps = 21/752 (2%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +K+G   +    T LV L+ +  ++ +  RVF+ +++     + ++L GYA+N   +  L
Sbjct: 73  IKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
               RM+ + +KP  + F+ +L V  D   +    ++H  +I N           +++MY
Sbjct: 133 AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMY 192

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
            K + + DA  +FD M +RD ++WN+++AG+  N    +A E    M   G      T V
Sbjct: 193 AKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           +V+   A    L + + +H   ++ G     NI T L   YSKCG +E A  IF  M + 
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGM-DQ 311

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----V 400
           K VVSW +M+ G++QNG  + A+  F +M  EG+ P G T    L A   +   +    V
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFV 371

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  + + N     SV  +L++ Y K   +D A+ +F  ++ +  V+W+AM+ GYAQ G  
Sbjct: 372 HKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRV 431

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A+  + ++ S G+KP+ FT  SVI A  A  +     K  H   I++ L+  + V++A
Sbjct: 432 SEALNCFSEMKSLGMKPDSFTMVSVIPAL-AELSVTRHAKWIHGLIIRSCLDKNIFVTTA 490

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LV MYSK G I  A ++F     R +++WN+MI GY  HG  + AL++F +M++  +E +
Sbjct: 491 LVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPN 550

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            IT++ VI+AC+H+GLVDEG ++F  M  ++ + P+M+HY  MVDL  RAG +++A D I
Sbjct: 551 DITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFI 610

Query: 641 NRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQ 686
             MP +   TV+  +L AC              +L  L P +   +VLL+N+YA+T  W 
Sbjct: 611 ENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWS 670

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + A VRK M  + +KK  G S +E++N+ +SF +G  +HPQS +IY+ LEEL   +K AG
Sbjct: 671 KVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAG 730

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PDT+ +L D++D+ +E +L+ HSE+LAIAFGL+ T  G  + + KNLRVCGDCH   K
Sbjct: 731 YVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATK 789

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IS +  R+I+VRD  RFHHFK G+CSCGDYW
Sbjct: 790 YISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 263/493 (53%), Gaps = 5/493 (1%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           Y+ +L  Y ++S  + AL     +R   +       + +LK CG   D   G+++H + +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
            + FA +V   T +V++Y +   ++D  ++FD M E ++VSW ++++G+++N    + LE
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L  RMQ EG +P+S T  TVL   AD G++     +H   I+ G   + ++  AL  MY 
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS 294

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   V  AR +FDGM+ +  ++WNSM+ GYV N    +A   F  M   G + T  T + 
Sbjct: 295 KCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIME 354

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
            +  CA   +L   + +H  V +  +  D ++   L+  YSKC +++ AS IF+ +   +
Sbjct: 355 ALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG-R 413

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VH 401
             VSW AMI G+ QNG +  A+N F +M   G++P+ FT   ++ A   +S  +    +H
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
             II++  +K+  V TAL++ Y K G +  A K+F++I ++ ++ W+AM+ GY   G   
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+ ++ ++    V+PN+ T+ SVI+AC+      E  + F +      L  ++    A+
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593

Query: 522 VTMYSKKGNIESA 534
           V +  + G I+ A
Sbjct: 594 VDLLGRAGRIKEA 606



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 228/445 (51%), Gaps = 21/445 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR P+R+ V +N ++  + ++   ++AL L L ++  G      TL +VL     +  
Sbjct: 204 MFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGL 263

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G+ +H   +++GFA+ VN+ST+L D+Y +  +VE  R +FD M++  VVSW S++ G
Sbjct: 264 LMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDG 323

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV--IKNGGE 211
           Y +N   ++ + +F +M  EGI P   T    L   AD G +     VH  V  +  G +
Sbjct: 324 YVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSD 383

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +  SV N+LISMY K K V  A  +F+ +  R  ++WN+M+ GY  N    EA   F+ M
Sbjct: 384 I--SVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +    T VSVI   A     R A+ +H  ++++ +D +  + T L+  YSKCG +
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A K+F M+ + + V++W AMI G+  +G    A++ F +M +  V PN  TY  +++A
Sbjct: 502 HMARKLFDMISD-RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISA 560

Query: 392 ---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKDIV 445
                 V     H   +K +Y  E S     A+++   + G + EA    E +     I 
Sbjct: 561 CSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGIT 620

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQL 470
            + AML          GA KI++ +
Sbjct: 621 VYGAML----------GACKIHKNI 635



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 213/383 (55%), Gaps = 10/383 (2%)

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
           F T +      + + +     +++LC + KEL    Q+   V+KNG+  +H  +T L+  
Sbjct: 34  FHTLSERAHIPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSL 90

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           +SK G + +A+++F  + +  D +  T M+ G+ +N +++ A+ F C+M  + V+P  + 
Sbjct: 91  FSKYGSINEAARVFEPIDDKLDALYHT-MLKGYAKNSSLETALAFLCRMRYDDVKPVVYN 149

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           ++ +L      +      ++H  +I  ++  +    T ++N Y K   +D+A K+F+ + 
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP 209

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           E+D+V+W+ ++AG++Q G  + A+++  ++  EG +P+  T  +V+ A  A    +  GK
Sbjct: 210 ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPA-AADVGLLMVGK 268

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
             H  +I+A     + +S+AL  MYSK G++E+A  +F    ++ +VSWNSM+ GY Q+G
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             +KA+ VF++M  + ++  G+T +  + AC   G ++ G ++    V++ ++   +   
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG-KFVHKFVDQLNLGSDISVM 387

Query: 621 SCMVDLYSRAGMLEKAMDIINRM 643
           + ++ +YS+   ++ A DI N +
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNL 410


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/803 (35%), Positives = 462/803 (57%), Gaps = 40/803 (4%)

Query: 68  GIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN 127
           GIR    P+   T SS+LK+C    D   G+ VH   ++     D  +  SL+ LY ++ 
Sbjct: 56  GIR----PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 128 NVEDGRRVFDDM---NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           +      VF+ M    + +VVSW+++++ Y  N      +++F      G+ PN + ++ 
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSK-MVRDARAVFDGMED 242
           V+   ++   V         ++K G  E    V  +LI M++K +    +A  VFD M +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
            + +TW  M+   +      EA   F +M L+G E  + T  SV   CA  + L L +QL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           HS  +++G+  D  +   L+  Y+KC   G ++D  K+F  M E   V+SWTA+I+G+++
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMK 348

Query: 360 NGAIDL-AVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF---- 413
           N  +   A+N F +M  +G V PN FT+S    A   +S  +V   ++   +++      
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           SV  ++++ +VK   +++A + FE + EK++V+++  L G  +  + E A K+  ++T  
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            +  + FTF+S+++   A   ++ +G+Q H+  +K  L+    V +AL++MYSK G+I++
Sbjct: 469 ELGVSAFTFASLLSG-VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           AS VF     R+++SW SMI G+A+HG   + LE F +M  + ++ + +T++ +++AC+H
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            GLV EG ++F+ M  +H I P MEHY+CMVDL  RAG+L  A + IN MPF A   VWR
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647

Query: 654 TVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           T L ACR              ++ L P++ A Y+ LSN+YA  G W+E   +R+ M +R 
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           + KE G SWIEV +K + F  GD +HP ++QIY +L+ L T +K  GY PDT  VL  ++
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLE 767

Query: 760 DEHKEA----ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
           +E+ EA    +L QHSE++A+AFGL++T    P+++ KNLRVCGDCH  +K IS +  R+
Sbjct: 768 EENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGRE 827

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           IV+RD NRFHHFK+G CSC DYW
Sbjct: 828 IVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 285/572 (49%), Gaps = 30/572 (5%)

Query: 28  SKKDQSLFD---RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           S K + +F+   R  +R+ V ++ ++  Y  +    +A+ +F+    LGL       ++V
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172

Query: 85  LKTCGCLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMR-TNNVEDGRRVFDDMNES 142
           ++ C        GR      +K+G F  DV V  SL+D++++  N+ E+  +VFD M+E 
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           NVV+WT +++   +       +  F  M + G + + FT S+V    A+   ++   Q+H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKM---VRDARAVFDGMEDRDSITWNSMVAGYVTN- 258
           +  I++G  +V  V  +L+ MY K      V D R VFD MED   ++W +++ GY+ N 
Sbjct: 293 SWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350

Query: 259 ELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
            L  EA   F+ M   G  E    TF S  K C    + R+ +Q+  Q  K G+  + ++
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSV 410

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              ++  + K  +MEDA + F  + E K++VS+   + G  +N   + A     ++T   
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSE-KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           +  + FT++ +L+    V       Q+H+ ++K     +  V  AL++ Y K G +D A+
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF  ++ +++++W++M+ G+A+ G     ++ + Q+  EGVKPNE T+ ++++AC+   
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589

Query: 494 AAVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVS 548
              E  + F++      IK K+ +  C    +V +  + G +  A E       + D++ 
Sbjct: 590 LVSEGWRHFNSMYEDHKIKPKMEHYAC----MVDLLCRAGLLTDAFEFINTMPFQADVLV 645

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           W + +     H +T    E+ K   R+ LE D
Sbjct: 646 WRTFLGACRVHSNT----ELGKLAARKILELD 673



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 256/532 (48%), Gaps = 65/532 (12%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+  + N V +  ++    +    +EA+  FL +   G      TLSSV   C  L +
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN---NVEDGRRVFDDMNESNVVSWTSL 150
              G+Q+H   ++SG   DV    SLVD+Y + +   +V+D R+VFD M + +V+SWT+L
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342

Query: 151 LSGYARN-KMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++GY +N  +    + LF  M  +G ++PN FTFS+      +        QV     K 
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    +SV N++ISM++KS  + DA+  F+ + +++ +++N+ + G   N    +AF+  
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + +      ++  TF S++   A    +R   Q+HSQV+K G+  +  +   L+  YSKC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++ AS++F+ M E ++V+SWT+MI+G  ++G     +  F QM  EGV+PN  TY  I
Sbjct: 523 GSIDTASRVFNFM-ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581

Query: 389 LTAQPAVSPFQ---------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           L+A   V                H IK   E        +++   + G+L +A   FE I
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY----ACMVDLLCRAGLLTDA---FEFI 634

Query: 440 D----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           +    + D++ W   L       +TE      R++    + PNE            P+A 
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNE------------PAAY 680

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           ++                       L  +Y+  G  E ++E+ ++ ++R+LV
Sbjct: 681 IQ-----------------------LSNIYACAGKWEESTEMRRKMKERNLV 709



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 151/305 (49%), Gaps = 19/305 (6%)

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRP-NGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
           +I  HL  G +  AV+    M R+G+RP +  T+S +L +      F+    VHA +I+ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELI---DEKDIVAWSAMLAGYAQIGDTEGAV 464
           + E    +  +L++ Y K G   +A  VFE +    ++D+V+WSAM+A Y   G    A+
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSALVT 523
           K++ +    G+ PN++ +++VI AC+  S  V  G+      +K     + +CV  +L+ 
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACS-NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210

Query: 524 MYSKKGN-IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           M+ K  N  E+A +VF +  + ++V+W  MI    Q G  ++A+  F +M     E D  
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-MVDLYSRA---GMLEKAMD 638
           T   V +AC     +  G+Q     +    +    +   C +VD+Y++    G ++    
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLV----DDVECSLVDMYAKCSADGSVDDCRK 326

Query: 639 IINRM 643
           + +RM
Sbjct: 327 VFDRM 331


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/669 (40%), Positives = 404/669 (60%), Gaps = 49/669 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA-GA 276
           N L+  Y KS  + +    F+ + DRD +TWN ++ GY  + L   A + +N M     +
Sbjct: 73  NNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSS 132

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            LTR T ++++KL ++   + L +Q+H QV+K G +    + + L+  YSK G + DA K
Sbjct: 133 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKK 192

Query: 337 IF----------------------------SMMREM-KDVVSWTAMISGHLQNGAIDLAV 367
           +F                             + R M KD VSW+AMI G  QNG    A+
Sbjct: 193 VFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAI 252

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
             F +M  EG++ + + +  +L A   +       Q+HA II+TN +    VG+AL++ Y
Sbjct: 253 ECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMY 312

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K   L  A  VF+ + +K++V+W+AM+ GY Q G    AVKI+  +   G+ P+ +T  
Sbjct: 313 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLG 372

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
             I+AC A  +++E+G QFH  +I A L + + VS++LVT+Y K G+I+ ++ +F     
Sbjct: 373 QAISAC-ANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNV 431

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           RD VSW +M+  YAQ G   +A+++F +M +  L+ DG+T  GVI+AC+ AGLV++GQ+Y
Sbjct: 432 RDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRY 491

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--- 660
           F++M+NE+ I P+  HYSCM+DL+SR+G +E+AM  IN MPF   A  W T+L+ACR   
Sbjct: 492 FELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKG 551

Query: 661 -----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
                      LI L PH  A Y LLS++YA+ G W   A++R+ M ++ V+KE G SWI
Sbjct: 552 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWI 611

Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
           + K K +SF A D S P S+QIY+KLEEL  ++ D GYKPDTS+V  D+++  K  +L+ 
Sbjct: 612 KWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNC 671

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSERLAIAFGL+  P+G P+++ KNLRVC DCH   K IS +  R+I+VRD  RFH FK+
Sbjct: 672 HSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 731

Query: 830 GLCSCGDYW 838
           G CSCGD+W
Sbjct: 732 GTCSCGDFW 740



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 245/515 (47%), Gaps = 48/515 (9%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIK 176
           +L+  Y ++ ++ +  R F+ + + + V+W  L+ GY+ + +    ++ ++ M  +    
Sbjct: 74  NLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSN 133

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
               T  T+L + +  G V+   Q+H  VIK G E    V + L+ MY K   + DA+ V
Sbjct: 134 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKV 193

Query: 237 FDGMEDR------------------------------DSITWNSMVAGYVTNELHMEAFE 266
           F G++DR                              DS++W++M+ G   N +  EA E
Sbjct: 194 FYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIE 253

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M + G ++ +  F SV+  C     +   RQ+H+ +++  +     + + L+  Y 
Sbjct: 254 CFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYC 313

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC  +  A  +F  M++ K+VVSWTAM+ G+ Q G    AV  F  M R G+ P+ +T  
Sbjct: 314 KCKCLHYAKTVFDRMKQ-KNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLG 372

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             ++A   +S      Q H   I        +V  +L+  Y K G +D++ ++F  ++ +
Sbjct: 373 QAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVR 432

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D V+W+AM++ YAQ G    A++++ ++   G+KP+  T + VI+AC+  +  VE+G+++
Sbjct: 433 DEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSR-AGLVEKGQRY 491

Query: 503 HACSI-KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQHG 560
               I +  +  +    S ++ ++S+ G IE A         R D + W +++      G
Sbjct: 492 FELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKG 551

Query: 561 HTKKALEVFKEMRRQDLEFD-----GITFIGVITA 590
           +    LE+ K      +E D     G T +  I A
Sbjct: 552 N----LEIGKWAAESLIELDPHHPAGYTLLSSIYA 582



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 218/464 (46%), Gaps = 38/464 (8%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           F++ P R+ V +N L+  Y    L   A+  +   ++     L   TL ++LK       
Sbjct: 92  FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGH 151

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF---DDMN---------- 140
              G+Q+H + +K GF   + V + L+D+Y +   + D ++VF   DD N          
Sbjct: 152 VSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGG 211

Query: 141 -----------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
                            E + VSW++++ G A+N M    +E F  M++EG+K + + F 
Sbjct: 212 LLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFG 271

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
           +VL      G +    Q+H  +I+   +    V +ALI MY K K +  A+ VFD M+ +
Sbjct: 272 SVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 331

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           + ++W +MV GY       EA + F +M  +G +    T    I  CA    L    Q H
Sbjct: 332 NVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFH 391

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
            + +  G+     +   L+  Y KCG ++D++++F+ M  ++D VSWTAM+S + Q G  
Sbjct: 392 GKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDEVSWTAMVSAYAQFGRA 450

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG--TA 418
             A+  F +M + G++P+G T + +++A      V   Q +  ++   Y    S G  + 
Sbjct: 451 VEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSC 510

Query: 419 LLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
           +++ + + G ++EA      +    D + W+ +L+     G+ E
Sbjct: 511 MIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLE 554



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 159/331 (48%), Gaps = 1/331 (0%)

Query: 37  RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
           R  +++ V ++ ++    ++ + +EA+  F  ++  GL +      SVL  CG L     
Sbjct: 226 RGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAIND 285

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GRQ+H   +++     + V ++L+D+Y +   +   + VFD M + NVVSWT+++ GY +
Sbjct: 286 GRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 345

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  +++F  MQ  GI P+ +T    +   A+   +    Q H   I  G     +V
Sbjct: 346 TGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITV 405

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+L+++Y K   + D+  +F+ M  RD ++W +MV+ Y      +EA + F+ M   G 
Sbjct: 406 SNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGL 465

Query: 277 ELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           +    T   VI  C+    + +  R     + + GI   +   + ++  +S+ G++E+A 
Sbjct: 466 KPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAM 525

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
              + M    D + WT ++S     G +++ 
Sbjct: 526 GFINGMPFRPDAIGWTTLLSACRNKGNLEIG 556



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 119/224 (53%), Gaps = 2/224 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FDR  Q+N V +  ++  Y +     EA+ +FL ++R G+     TL   +  C  +
Sbjct: 322 KTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANI 381

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q H + + +G    + VS SLV LY +  +++D  R+F++MN  + VSWT+++
Sbjct: 382 SSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMV 441

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S YA+       ++LF +M   G+KP+  T + V+   +  G+V    +   ++I   G 
Sbjct: 442 SAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGI 501

Query: 212 VVTSV-CNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVA 253
           V ++   + +I ++ +S  + +A    +GM  R D+I W ++++
Sbjct: 502 VPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 280/826 (33%), Positives = 460/826 (55%), Gaps = 24/826 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+  +R    +N ++        + EA+ L+  +R LG+ L   T   VLK CG   +
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD--MNESNVVSWTSLL 151
              G ++H   VK G+   V V  +L+ +Y +  ++   R +FD   M + + VSW S++
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S +     +   L LF RMQ  G++ N++TF + L        +     +H +++K+   
Sbjct: 224 SAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF 283

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NALI+MY     + DA  VF  M  +D ++WN++++G V N+++ +A   F +M
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G +  + + +++I     +  L    ++H+  +K+GID + +I   L+  Y KC  +
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCV 403

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +     F  M E KD++SWT +I+G+ QN     A+N   ++  E +  +      IL A
Sbjct: 404 KYMGSAFEYMPE-KDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLA 462

Query: 392 QPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       ++H +++K        +  A++N Y +  ++D A  VFE I+ KDIV+W
Sbjct: 463 CSGLKSEKLIKEIHGYVLKGGLADIL-IQNAIVNVYGELALVDYARHVFESINSKDIVSW 521

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++M+      G    A++++  L    ++P+  T  SV+ A  A S+ +++GK+ H   I
Sbjct: 522 TSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSS-LKKGKEIHGFLI 580

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +        ++++LV MY++ G +E+A  +F   ++RDL+ W SMI     HG  K A++
Sbjct: 581 RKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAID 640

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F +M  +++  D ITF+ ++ AC+H+GLV EG+Q+F+IM NE+ + P  EHY+C+VDL 
Sbjct: 641 LFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLL 700

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
           +R+  LE+A   +  MP   SA VW  +L ACR              L+ L   +S  YV
Sbjct: 701 ARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYV 760

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           L+SN +AA G W +   VR +M   K+KK+ G SWIEV+NK ++F+A D SHPQ N IY 
Sbjct: 761 LVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYL 820

Query: 734 KLEELSTRLKD-AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           KL + +  LK+  GY+  T  V  D+ +E K  +L  HSERLA+ +GL+ T  G  L+I 
Sbjct: 821 KLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRIT 880

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+C DCH   K+ S++ +R +VVRD +RFHHF+ GLCSCGD+W
Sbjct: 881 KNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 279/552 (50%), Gaps = 11/552 (1%)

Query: 97  GRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           G+Q+H   +K+  +   V + T  V +Y +  +  D  +VFD M+E  + +W +++    
Sbjct: 65  GQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACV 124

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
                   +EL+  M+V G+  ++FTF  VL             ++H + +K G      
Sbjct: 125 SAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVF 184

Query: 216 VCNALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           VCNALI+MY K   +  AR +FD   ME  D ++WNS+++ +V     +EA   F  M  
Sbjct: 185 VCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQE 244

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E    TFVS ++ C     +++ R +H+ +LK+    D  +   L+  Y+ CG+MED
Sbjct: 245 VGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMED 304

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M   KD VSW  ++SG +QN     A+N F  M   G +P+  +   ++ A  
Sbjct: 305 AERVFKSML-FKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASG 363

Query: 394 ----AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
                ++  +VHA+ IK   + +  +G +L++ Y K   +      FE + EKD+++W+ 
Sbjct: 364 RSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTT 423

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++AGYAQ      A+ + R++  E +  +     S++ AC+   +  +  K+ H   +K 
Sbjct: 424 IIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSE-KLIKEIHGYVLKG 482

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L + L + +A+V +Y +   ++ A  VF+    +D+VSW SMI     +G   +ALE+F
Sbjct: 483 GLADIL-IQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELF 541

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             +   ++E D IT + V+ A      + +G++    ++ +      +   S +VD+Y+R
Sbjct: 542 NSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANS-LVDMYAR 600

Query: 630 AGMLEKAMDIIN 641
            G +E A +I N
Sbjct: 601 CGTMENARNIFN 612



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 212/422 (50%), Gaps = 7/422 (1%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA-LISMYLKSKMVRDARA 235
           P    +S  L + A    +    Q+H   +K    + +   +   + MY K     DA  
Sbjct: 44  PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           VFD M +R   TWN+M+   V+   ++EA E +  M + G  L   TF  V+K C   KE
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMI 354
            RL  ++H   +K G      +   L+  Y+KCG +  A  +F S + E  D VSW ++I
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYE 410
           S H+  G    A++ F +M   GV  N +T+   L A    +  +    +HA I+K+N+ 
Sbjct: 224 SAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF 283

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
               V  AL+  Y   G +++A +VF+ +  KD V+W+ +L+G  Q      A+  ++ +
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
              G KP++ +  ++I A +  SA +  G + HA +IK  +++ + + ++L+ MY K   
Sbjct: 344 QDSGQKPDQVSVLNMI-AASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCC 402

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           ++     F+   ++DL+SW ++I GYAQ+     AL + ++++ + ++ D +    ++ A
Sbjct: 403 VKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLA 462

Query: 591 CT 592
           C+
Sbjct: 463 CS 464



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 140/277 (50%), Gaps = 2/277 (0%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S F+  P+++ + +  ++  Y ++  H +ALNL   ++   + +    + S+L  C  L 
Sbjct: 408 SAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLK 467

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
                +++H   +K G A D+ +  ++V++Y     V+  R VF+ +N  ++VSWTS+++
Sbjct: 468 SEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMIT 526

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
               N +    LELF+ +    I+P+  T  +VL   A    +    ++H  +I+ G  +
Sbjct: 527 CCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFL 586

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              + N+L+ MY +   + +AR +F+ ++ RD I W SM+     +    +A + F+ M 
Sbjct: 587 EGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMT 646

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
                    TF++++  C+ +  +   +Q H +++KN
Sbjct: 647 DENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKN 682


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/775 (36%), Positives = 436/775 (56%), Gaps = 25/775 (3%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           ++L+ C    D V  + +HC+ +K G   D+  +  L++ Y++    +D   +FD+M E 
Sbjct: 54  TMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           N VS+ +L  GYA     D V  L+ R+  EG + N   F++ L +            +H
Sbjct: 114 NNVSYVTLTQGYA---CQDPV-GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLH 169

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           + ++K G +    V  ALI+ Y     V  AR+VF+G+  +D + W  +V+ YV N    
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFE 229

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           ++ +  + MG+ G      TF + +K          A+ +H Q+LK   + D  +  GL+
Sbjct: 230 DSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLL 289

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y++ G M DA K+F+ M +  DVV W+ MI+   QNG  + AV+ F +M    V PN 
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPK-NDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNE 348

Query: 383 FTYSIILT--AQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           FT S IL   A    S    Q+H  ++K  ++    V  AL++ Y K   +D A K+F  
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAE 408

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  K++V+W+ ++ GY  +G+   A+ ++R+     V   E TFSS + AC A  A++E 
Sbjct: 409 LSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGAC-ASLASMEL 467

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G Q H  +IK      + VS++L+ MY+K G+I+ A  VF      D+ SWN++I GY+ 
Sbjct: 468 GVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYST 527

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG  ++AL +F  M+  D + +G+TF+GV++ C++AGL+D+GQ  F+ M+ +H I P +E
Sbjct: 528 HGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLE 587

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISL 664
           HY+CMV L+ R+G L+KAM++I  +P+  S  +WR +L+A                ++ +
Sbjct: 588 HYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKI 647

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P D A YVLLSNMYA    W   A +RK M ++ VKKE G SWIE +   + F  G   
Sbjct: 648 NPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSD 707

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           HP    I   LE L+ +   AGY PD + VL D+DDE K+  L  HSERLA+A+GLV  P
Sbjct: 708 HPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMP 767

Query: 785 AGAP-LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +    + I+KNLR+C DCH+ +K+IS + +RD+V+RD NRFHHF  G+CSC D+W
Sbjct: 768 SSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 244/485 (50%), Gaps = 12/485 (2%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           +S  + T+L     +    +A  +H  ++K G  +     N L++ Y+K+   +DA  +F
Sbjct: 48  DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           D M +R+++++ ++  GY       +    ++ +   G EL    F S +KL  +  +  
Sbjct: 108 DEMPERNNVSYVTLTQGYACQ----DPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           +   LHS ++K G D +  +   L+ AYS CG ++ A  +F  +   KD+V W  ++S +
Sbjct: 164 ICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGIL-CKDIVVWAGIVSCY 222

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSF 413
           ++NG  + ++    +M  +G  PN +T+   L A   +  F     VH  I+KT YE   
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            VG  LL  Y + G + +A KVF  + + D+V WS M+A + Q G    AV I+ ++   
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREG 342

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            V PNEFT SS++N C A       G+Q H   +K   +  + VS+AL+ +Y+K   +++
Sbjct: 343 FVVPNEFTLSSILNGC-AIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A ++F     +++VSWN++I GY   G   KAL +F+E  R  +    +TF   + AC  
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACAS 461

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
              ++ G Q   + +  ++        S ++D+Y++ G ++ A  + N M     A+ W 
Sbjct: 462 LASMELGVQVHGLAIKTNNAKRVAVSNS-LIDMYAKCGDIKVAQTVFNEMETIDVAS-WN 519

Query: 654 TVLAA 658
            +++ 
Sbjct: 520 ALISG 524



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 258/554 (46%), Gaps = 16/554 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           + K   +LFD  P+RN V Y  L   Y      Q+ + L+  + R G  L     +S LK
Sbjct: 99  FDKDALNLFDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLK 154

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L        +H   VK G+  +  V  +L++ Y    +V+  R VF+ +   ++V 
Sbjct: 155 LFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVV 214

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  ++S Y  N   +  L+L  RM ++G  PN++TF T L      G    A  VH  ++
Sbjct: 215 WAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQIL 274

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K   E+   V   L+ +Y +   + DA  VF+ M   D + W+ M+A +  N    +A +
Sbjct: 275 KTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVD 334

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M          T  S++  CA  K   L  QLH  V+K G D D  +   L+  Y+
Sbjct: 335 IFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYA 394

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC KM+ A K+F+ +   K+VVSW  +I G+   G    A+N F +  R  V     T+S
Sbjct: 395 KCEKMDTAVKLFAELSS-KNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFS 453

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             L A  +++      QVH   IKTN  K  +V  +L++ Y K G +  A  VF  ++  
Sbjct: 454 SALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETI 513

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ- 501
           D+ +W+A+++GY+  G    A++I+  +     KPN  TF  V++ C+  +  ++QG+  
Sbjct: 514 DVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCS-NAGLIDQGQDC 572

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICG----Y 556
           F +      +   L   + +V ++ + G ++ A  + +    +  ++ W +M+      Y
Sbjct: 573 FESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQY 632

Query: 557 AQHGHTKKALEVFK 570
            +    + A E+ K
Sbjct: 633 NEEFARRSAEEILK 646



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 186/388 (47%), Gaps = 18/388 (4%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L    + ++++ C    +   A+ +H  +LK G   D      L+ AY K G  +DA  +
Sbjct: 47  LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFT--YSIILTAQP 393
           F  M E ++ VS+  +  G+    A    V  + ++ REG  + P+ FT    + ++   
Sbjct: 107 FDEMPE-RNNVSYVTLTQGY----ACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
           A   + +H+ I+K  Y+ +  VG AL+NAY   G +D A  VFE I  KDIV W+ +++ 
Sbjct: 162 AEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSC 221

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y + G  E ++++  ++  +G  PN +TF + + A +    A    K  H   +K     
Sbjct: 222 YVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKA-SIGLGAFHFAKSVHGQILKTCYEL 280

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
              V   L+ +Y++ G++  A +VF    K D+V W+ MI  + Q+G   KA+++F  MR
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMR 340

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRA 630
              +  +  T   ++  C        G+Q   ++V    +  +Y +    + ++D+Y++ 
Sbjct: 341 EGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVS----NALIDVYAKC 396

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAA 658
             ++ A+ +   +  + +   W TV+  
Sbjct: 397 EKMDTAVKLFAELS-SKNVVSWNTVIVG 423


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 275/752 (36%), Positives = 425/752 (56%), Gaps = 21/752 (2%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +K+GF  +    T L+ L+ + N++ +  RVF+ +     V + ++L GYA+N      +
Sbjct: 68  IKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAV 127

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
             + RM+ + + P  + F+ +L +  +   +    ++H MVI NG +       A++++Y
Sbjct: 128 RFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLY 187

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
            K + + DA  +F+ M  RD ++WN++VAGY  N     A +    M  AG +    T V
Sbjct: 188 AKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLV 247

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           SV+   A  K LR+ R +H    + G ++  N+ T ++  Y KCG +  A  +F  M   
Sbjct: 248 SVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSS- 306

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHI 404
           ++VVSW  MI G+ QNG  + A   F +M  EGV P   +    L A   +   +   ++
Sbjct: 307 RNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYV 366

Query: 405 IKTNYEKSF----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
            +   EK      SV  +L++ Y K   +D AA VF  +  K +V W+AM+ GYAQ G  
Sbjct: 367 HRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCV 426

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A+ ++ ++ S  +KP+ FT  SVI A  A  +   Q K  H  +I+  ++  + V +A
Sbjct: 427 NEALNLFCEMQSHDIKPDSFTLVSVITAL-ADLSVTRQAKWIHGLAIRTLMDKNVFVCTA 485

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+  ++K G I++A ++F   ++R +++WN+MI GY  +GH ++AL++F EM+   ++ +
Sbjct: 486 LIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPN 545

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITF+ VI AC+H+GLV+EG  YF+ M   + + PTM+HY  MVDL  RAG L+ A   I
Sbjct: 546 EITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFI 605

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
             MP     TV   +L ACR              L  L P D   +VLL+NMYA+   W 
Sbjct: 606 QDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWD 665

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + ARVR  M  + ++K  G S +E++N+ ++F +G  +HPQS +IY+ LE L   +K AG
Sbjct: 666 KVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAG 725

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PDT+ +  D++++ KE +LS HSERLAIAFGL+ T  G  + I KNLRVCGDCH   K
Sbjct: 726 YVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATK 784

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IS +  R+I+VRD  RFHHFK G+CSCGDYW
Sbjct: 785 YISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 219/442 (49%), Gaps = 15/442 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+R PQR+ V +N ++  Y ++   + A+ + L ++  G      TL SVL     L  
Sbjct: 199 MFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKA 258

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR +H    ++GF   VNV+T+++D Y +  +V   R VF  M+  NVVSW +++ G
Sbjct: 259 LRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDG 318

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+N  ++     F +M  EG++P + +    L   A+ G +     VH ++ +      
Sbjct: 319 YAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD 378

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            SV N+LISMY K K V  A +VF  ++ +  +TWN+M+ GY  N    EA   F  M  
Sbjct: 379 VSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQS 438

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    T VSVI   A     R A+ +H   ++  +D +  + T L+  ++KCG ++ 
Sbjct: 439 HDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQT 498

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A K+F +M+E + V++W AMI G+  NG    A++ F +M    V+PN  T+  ++ A  
Sbjct: 499 ARKLFDLMQE-RHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACS 557

Query: 392 -QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
               V     +   +K NY  E +     A+++   + G LD+A K  + +  K      
Sbjct: 558 HSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVK------ 611

Query: 449 AMLAGYAQIGDTEGAVKIYRQL 470
               G   +G   GA +I++ +
Sbjct: 612 ---PGITVLGAMLGACRIHKNV 630



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 202/375 (53%), Gaps = 11/375 (2%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           +++LC + KEL    Q+   ++KNG   +H  +T L+  + K   + +A+++F  +    
Sbjct: 50  LLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP--NGFTYSIILTAQ--PAVSPFQVH 401
           DV+  T M+ G+ +N  +  AV F+ +M  + V P    FTY + L+ +        ++H
Sbjct: 107 DVLYHT-MLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIH 165

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
             +I   ++ +    TA++N Y K   +++A K+FE + ++D+V+W+ ++AGYAQ G   
Sbjct: 166 GMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFAR 225

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            AV++  Q+   G KP+  T  SV+ A  A   A+  G+  H  + +A     + V++A+
Sbjct: 226 RAVQVVLQMQEAGQKPDSITLVSVLPA-VADLKALRIGRSIHGYAFRAGFEYMVNVATAM 284

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           +  Y K G++ SA  VFK    R++VSWN+MI GYAQ+G +++A   F +M  + +E   
Sbjct: 285 LDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTN 344

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           ++ +G + AC + G ++ G +Y   +++E  I   +   + ++ +YS+   ++ A  +  
Sbjct: 345 VSMMGALHACANLGDLERG-RYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFG 403

Query: 642 RMPFAASATVWRTVL 656
            +      T W  ++
Sbjct: 404 NLKHKTVVT-WNAMI 417



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 1/216 (0%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F     +  V +N ++  Y ++    EALNLF  ++   +     TL SV+     L 
Sbjct: 400 SVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLS 459

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
                + +H   +++   ++V V T+L+D + +   ++  R++FD M E +V++W +++ 
Sbjct: 460 VTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMID 519

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-E 211
           GY  N      L+LF+ MQ   +KPN  TF +V+   +  G+V   +     + +N G E
Sbjct: 520 GYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLE 579

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
                  A++ +  ++  + DA      M  +  IT
Sbjct: 580 PTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGIT 615


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 290/833 (34%), Positives = 467/833 (56%), Gaps = 37/833 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F R   R+   +  ++  Y      + A+ +F  +++ G+     T  +VLK C  L
Sbjct: 82  EEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARL 141

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR +H   V+SG      ++  L+ +Y     V     +F+ M E ++VSW + +
Sbjct: 142 GDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAI 200

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +  A++   D  LELF RMQ+EG++P   T    L V A    +  A  +H++V ++G E
Sbjct: 201 AANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLE 257

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  AL S Y +   +  A+ VFD   +RD ++WN+M+  Y  +    EA   F  M
Sbjct: 258 QTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G   ++ T V+    C++   LR  R +H+  L+ G+D D  +   L+  Y++CG  
Sbjct: 318 LHEGIPPSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSP 374

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E+A  +F  +    + VSW  MI+G  Q G +  A+  F +M  EG+ P   TY  +L A
Sbjct: 375 EEARHLFEGI--PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432

Query: 392 --------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE---LID 440
                   +      ++H+ I+   Y    ++GTA++  Y   G +DEAA  F+   + D
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D+V+W+A+++  +Q G  + A+  +R++   GV PN+ T  +V++AC A +AA+ +G 
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDAC-AGAAALTEGV 551

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQH 559
             H     + + + + V++AL +MY + G++ESA E+F++   +RD+V +N+MI  Y+Q+
Sbjct: 552 IVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQN 611

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G   +AL++F  M+++    D  +F+ V++AC+H GL DEG + F  M   + I P+ +H
Sbjct: 612 GLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDH 671

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y+C VD+  RAG L  A ++I  M    +  VW+T+L ACR              +  L 
Sbjct: 672 YACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELD 731

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D + YV+LSN+ A  G W E A VR  M  R ++K+AG SWIE+K++ + F+AGD SH
Sbjct: 732 PGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSH 791

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+S +IY +LE L   +++ GY PDT  VL+ +D+  KE +L QHSERLAIA G++++  
Sbjct: 792 PRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSST 851

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              ++++KNLRVC DCH   K ISK+  ++IVVRDT+RFHHF +G CSCGDYW
Sbjct: 852 D-TVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/577 (28%), Positives = 305/577 (52%), Gaps = 32/577 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR++H   V  G   ++     L+ LY++  ++ D   VF  +   +  SWT++++ Y  
Sbjct: 48  GRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTE 105

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +    R + +FHRMQ EG++ ++ TF  VL   A  G ++    +H  ++++G E  + +
Sbjct: 106 HGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVL 165

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-TNELHMEAFETFNNMGLAG 275
            N L+ +Y     V  A  +F+ ME RD ++WN+ +A    + +L M A E F  M L G
Sbjct: 166 ANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDM-ALELFQRMQLEG 223

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
               R T V  + +CA   ++R AR +HS V ++G++    + T L  AY++ G ++ A 
Sbjct: 224 VRPARITLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAK 280

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F    E +DVVSW AM+  + Q+G +  A   F +M  EG+ P+  T   ++ A    
Sbjct: 281 EVFDRAAE-RDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT---LVNASTGC 336

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           S  +    +HA  ++   ++   +G ALL+ Y + G  +EA  +FE I   + V+W+ M+
Sbjct: 337 SSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMI 395

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA---PSAAVEQGKQFHACSIK 508
           AG +Q G  + A+++++++  EG+ P   T+ +++ A  +    + A+ +G++ H+  + 
Sbjct: 396 AGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVS 455

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKR---QRKRDLVSWNSMICGYAQHGHTKKA 565
               +   + +A+V MY+  G I+ A+  F+R   + + D+VSWN++I   +QHGH K+A
Sbjct: 456 CGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRA 515

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YS 621
           L  F+ M    +  + IT + V+ AC  A  + EG     ++V++H  +  ME      +
Sbjct: 516 LGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEG-----VIVHDHLRHSGMESNVFVAT 570

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            +  +Y R G LE A +I  ++       ++  ++AA
Sbjct: 571 ALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/741 (36%), Positives = 418/741 (56%), Gaps = 29/741 (3%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +  +V D   VF  +   N VSWT +++ +ARN      L  + RM +EG++P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           F   +GV +    +     +H M+++    E    +  ALI+MY + + +  AR  FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS---TFVSVIKLCATTKELR 297
             +  +TWN+++AGY  N  H  A + + +M     E  +    TF S +  C+   ++ 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
             R++ ++ + +G   D  ++  L+  YSKCG +E A K+F  ++  +DV++W  MISG+
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKN-RDVIAWNTMISGY 239

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSF 413
            + GA   A+  F +M     +PN  T+  +LTA   +   +    +H  + +  YE   
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299

Query: 414 SVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            +G  LLN Y K    L+EA +VFE +  +D++ W+ ++  Y Q G  + A+ I++Q+  
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           E V PNE T S+V++AC A   A  QGK  HA     +    + + ++L+ MY++ G+++
Sbjct: 360 ENVAPNEITLSNVLSAC-AVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
               VF   R + LVSW+++I  YAQHGH++  LE F E+ ++ L  D +T +  ++AC+
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           H G++ EG Q F  MV +H + P   H+ CMVDL SRAG LE A ++I+ MPF   A  W
Sbjct: 479 HGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538

Query: 653 RTVLAACRL--------------ISLQPHDS-AIYVLLSNMYAATGHWQERARVRKLMND 697
            ++L+ C+L                L+  D  +   LLSN+YA  G W +   VRK  N 
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNR 595

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
           R  +K  G S+IE+ +  + F+AGD SHP+   I ++++ LS ++KDAGY PD   VL +
Sbjct: 596 RAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHN 655

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           + +E KE +L  HSE+LAIA+GL++TP G PL IVKNLR C DCH   K IS++  R IV
Sbjct: 656 VKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIV 715

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           VRD+ RFHHF+ G CSC DYW
Sbjct: 716 VRDSTRFHHFENGSCSCKDYW 736



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 280/554 (50%), Gaps = 19/554 (3%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++F      N V +  ++  + R+  ++EAL  +  +   GL   G+     +  C    
Sbjct: 13  AVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSK 72

Query: 93  DHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           D   G+ +H   +++     D+ + T+L+ +Y R  ++E  R+ FD+M +  +V+W +L+
Sbjct: 73  DLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALI 132

Query: 152 SGYARNKMNDRVLELFHRM---QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +GY+RN  +   L+++  M     EG+KP++ TFS+ L   +  G ++   ++    + +
Sbjct: 133 AGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVAS 192

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    + V NALI+MY K   +  AR VFD +++RD I WN+M++GY       +A E F
Sbjct: 193 GYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF 252

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             MG    +    TF+ ++  C   ++L   R +H +V ++G + D  I   L+  Y+KC
Sbjct: 253 QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKC 312

Query: 329 -GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
              +E+A ++F  +R  +DV++W  +I  ++Q G    A++ F QM  E V PN  T S 
Sbjct: 313 SSSLEEARQVFERLR-TRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSN 371

Query: 388 ILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+A   +   +    VHA I     +    +  +L+N Y + G LD+   VF  I +K 
Sbjct: 372 VLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKS 431

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+WS ++A YAQ G +   ++ + +L  EG+  ++ T  S ++AC+      E  + F 
Sbjct: 432 LVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFL 491

Query: 504 AC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
           +      +     + LC    +V + S+ G +E+A  +        D V+W S++ G   
Sbjct: 492 SMVGDHGLAPDYRHFLC----MVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKL 547

Query: 559 HGHTKKALEVFKEM 572
           H  TK+A  V  ++
Sbjct: 548 HNDTKRAARVADKL 561


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/741 (36%), Positives = 417/741 (56%), Gaps = 29/741 (3%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +  +V D   VF  +   N VSWT +++ +ARN      L  + RM +EG++P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           F   +GV +    +     +H M+++    E    +  ALI+MY + + +  AR  FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS---TFVSVIKLCATTKELR 297
             +  +TWN+++AGY  N  H  A + + +M     E  +    TF S +  C    ++ 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
             R++ ++ + +G   D  ++  L+  YSKCG +E A K+F  ++  +DV++W  MISG+
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKN-RDVIAWNTMISGY 239

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSF 413
            + GA   A+  F +M     +PN  T+  +LTA   +   +    +H  + +  YE   
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299

Query: 414 SVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            +G  LLN Y K    L+EA +VFE +  +D++ W+ ++  Y Q G  + A+ I++Q+  
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           E V PNE T S+V++AC A   A  QGK  HA     +    + + ++L+ MY++ G+++
Sbjct: 360 ENVAPNEITLSNVLSAC-AVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLD 418

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
               VF   R + LVSW+++I  YAQHGH++  LE F E+ ++ L  D +T +  ++AC+
Sbjct: 419 DTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACS 478

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           H G++ EG Q F  MV +H + P   H+ CMVDL SRAG LE A ++I+ MPF   A  W
Sbjct: 479 HGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538

Query: 653 RTVLAACRL--------------ISLQPHDS-AIYVLLSNMYAATGHWQERARVRKLMND 697
            ++L+ C+L                L+  D  +   LLSN+YA  G W +   VRK  N 
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNR 595

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
           R  +K  G S+IE+ +  + F+AGD SHP+   I ++++ LS ++KDAGY PD   VL +
Sbjct: 596 RAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHN 655

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           + +E KE +L  HSE+LAIA+GL++TP G PL IVKNLR C DCH   K IS++  R IV
Sbjct: 656 VKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIV 715

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           VRD+ RFHHF+ G CSC DYW
Sbjct: 716 VRDSTRFHHFENGSCSCKDYW 736



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 279/554 (50%), Gaps = 19/554 (3%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++F      N V +  ++  + R+  ++EAL  +  +   GL   G+     +  C    
Sbjct: 13  AVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSK 72

Query: 93  DHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           D   G+ +H   +++     D+ + T+L+ +Y R  ++E  R+ FD+M +  +V+W +L+
Sbjct: 73  DLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALI 132

Query: 152 SGYARNKMNDRVLELFHRM---QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +GY+RN  +   L+++  M     EG+KP++ TFS+ L      G ++   ++    + +
Sbjct: 133 AGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVAS 192

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    + V NALI+MY K   +  AR VFD +++RD I WN+M++GY       +A E F
Sbjct: 193 GYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELF 252

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             MG    +    TF+ ++  C   ++L   R +H +V ++G + D  I   L+  Y+KC
Sbjct: 253 QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKC 312

Query: 329 -GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
              +E+A ++F  MR  +DV++W  +I  ++Q G    A++ F QM  E V PN  T S 
Sbjct: 313 SSSLEEARQVFERMR-TRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSN 371

Query: 388 ILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+A   +   +    VHA I     +    +  +L+N Y + G LD+   VF  I +K 
Sbjct: 372 VLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKS 431

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+WS ++A YAQ G +   ++ + +L  EG+  ++ T  S ++AC+      E  + F 
Sbjct: 432 LVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFL 491

Query: 504 AC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
           +      +     + LC    +V + S+ G +E+A  +        D V+W S++ G   
Sbjct: 492 SMVGDHGLAPDYRHFLC----MVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKL 547

Query: 559 HGHTKKALEVFKEM 572
           H  TK+A  V  ++
Sbjct: 548 HNDTKRAARVADKL 561


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 274/752 (36%), Positives = 427/752 (56%), Gaps = 21/752 (2%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +K+G   +    T LV L+ +  ++ +  RVF+ +++     + ++L GYA+N   +  L
Sbjct: 73  IKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
               RM+ + +KP  + F+ +L V  D   +    ++H  +I N           +++MY
Sbjct: 133 AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMY 192

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
            K + + DA  +FD M +RD ++WN+++AG+  N    +A E    M   G      T V
Sbjct: 193 AKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           +V+   A    L + + +H   ++ G     NI T L   YSKCG +E A  IF  M + 
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGM-DQ 311

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----V 400
           K VVSW +M+ G++QNG  + A+  F +M  EG+ P G T    L A   +   +    V
Sbjct: 312 KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFV 371

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  + + N     SV  +L++ Y K   +D A+ +F  ++ +  V+W+AM+ GYAQ G  
Sbjct: 372 HKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRV 431

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A+  + ++ S G+KP+ FT  SVI A  A  +     K  H   I++ L+  + V++A
Sbjct: 432 SEALNCFSEMKSLGMKPDSFTMVSVIPAL-AELSVTRHAKWIHGLIIRSCLDKNIFVTTA 490

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LV MYSK G I  A ++F     R +++WN+MI GY  HG  + AL++F +M++  +E +
Sbjct: 491 LVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPN 550

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            IT++ VI+AC+H+GLVDEG ++F  M  ++ + P+M+HY  MVDL  RAG +++A D I
Sbjct: 551 DITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFI 610

Query: 641 NRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQ 686
             MP +   TV+     AC              +L  L P +   +VLL+N+YA+T  W 
Sbjct: 611 ENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWS 670

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + A VRK M  + +KK  G S +E++N+ +SF +G  +HPQS +IY+ LEEL   +K AG
Sbjct: 671 KVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAG 730

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PDT+ +L D++D+ +E +L+ HSE+LAIAFGL+ T  G  + + KNLRVCGDCH   K
Sbjct: 731 YVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATK 789

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IS +  R+I+VRD  RFHHFK G+CSCGDYW
Sbjct: 790 YISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 263/493 (53%), Gaps = 5/493 (1%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           Y+ +L  Y ++S  + AL     +R   +       + +LK CG   D   G+++H + +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
            + FA +V   T +V++Y +   ++D  ++FD M E ++VSW ++++G+++N    + LE
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L  RMQ EG +P+S T  TVL   AD G++     +H   I+ G   + ++  AL  MY 
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS 294

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   V  AR +FDGM+ +  ++WNSM+ GYV N    +A   F  M   G + T  T + 
Sbjct: 295 KCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIME 354

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
            +  CA   +L   + +H  V +  +  D ++   L+  YSKC +++ AS IF+ +   +
Sbjct: 355 ALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNG-R 413

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VH 401
             VSW AMI G+ QNG +  A+N F +M   G++P+ FT   ++ A   +S  +    +H
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
             II++  +K+  V TAL++ Y K G +  A K+F++I ++ ++ W+AM+ GY   G   
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+ ++ ++    V+PN+ T+ SVI+AC+      E  + F +      L  ++    A+
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593

Query: 522 VTMYSKKGNIESA 534
           V +  + G I+ A
Sbjct: 594 VDLLGRAGRIKEA 606



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 228/444 (51%), Gaps = 19/444 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR P+R+ V +N ++  + ++   ++AL L L ++  G      TL +VL     +  
Sbjct: 204 MFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGL 263

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G+ +H   +++GFA+ VN+ST+L D+Y +  +VE  R +FD M++  VVSW S++ G
Sbjct: 264 LMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDG 323

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV--IKNGGE 211
           Y +N   ++ + +F +M  EGI P   T    L   AD G +     VH  V  +  G +
Sbjct: 324 YVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSD 383

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +  SV N+LISMY K K V  A  +F+ +  R  ++WN+M+ GY  N    EA   F+ M
Sbjct: 384 I--SVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +    T VSVI   A     R A+ +H  ++++ +D +  + T L+  YSKCG +
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A K+F M+ + + V++W AMI G+  +G    A++ F +M +  V PN  TY  +++A
Sbjct: 502 HMARKLFDMISD-RHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISA 560

Query: 392 ---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
                 V     H   +K +Y  E S     A+++   + G + EA   ++ I+   I  
Sbjct: 561 CSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA---WDFIENMPIS- 616

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQL 470
                 G    G   GA KI++ +
Sbjct: 617 -----PGITVYGAXXGACKIHKNI 635



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 213/383 (55%), Gaps = 10/383 (2%)

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
           F T +      + + +     +++LC + KEL    Q+   V+KNG+  +H  +T L+  
Sbjct: 34  FHTLSERAHIPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSL 90

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           +SK G + +A+++F  + +  D +  T M+ G+ +N +++ A+ F C+M  + V+P  + 
Sbjct: 91  FSKYGSINEAARVFEPIDDKLDALYHT-MLKGYAKNSSLETALAFLCRMRYDDVKPVVYN 149

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           ++ +L      +      ++H  +I  ++  +    T ++N Y K   +D+A K+F+ + 
Sbjct: 150 FTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP 209

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           E+D+V+W+ ++AG++Q G  + A+++  ++  EG +P+  T  +V+ A  A    +  GK
Sbjct: 210 ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPA-AADVGLLMVGK 268

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
             H  +I+A     + +S+AL  MYSK G++E+A  +F    ++ +VSWNSM+ GY Q+G
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             +KA+ VF++M  + ++  G+T +  + AC   G ++ G ++    V++ ++   +   
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERG-KFVHKFVDQLNLGSDISVM 387

Query: 621 SCMVDLYSRAGMLEKAMDIINRM 643
           + ++ +YS+   ++ A DI N +
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNL 410


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 270/775 (34%), Positives = 443/775 (57%), Gaps = 21/775 (2%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           ++L+ C    +   GR+VH      GF ++  V   L+ +Y +  +V + ++VF+ +   
Sbjct: 10  ALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERK 69

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +V +WT ++  Y +    DR L +F++MQ E + P   T+  +L   A    +   +++H
Sbjct: 70  DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 129

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             +++ G E    V  ALI+MY K   VR A   F  +E RD ++W +M+A  V ++   
Sbjct: 130 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 189

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            A   +  M L G    + T  +V         L   + ++S V    ++ D  +    M
Sbjct: 190 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAM 249

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             +   G + DA ++F  M + +DVV+W  +I+ ++QN     AV  F ++ ++G++ N 
Sbjct: 250 NMFGNAGLLGDARRLFEDMVD-RDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKAND 308

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T+ ++L    +++       +H  + +  Y++   V TAL++ Y +     +A K+F  
Sbjct: 309 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVD 368

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD++ W+ M   YAQ G  + A+++++++  EG +P   T  +V++ C A  AA+++
Sbjct: 369 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC-AHLAALQK 427

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G+Q H+  I+      + V +AL+ MY K G +  A  VF++  KRD++ WNSM+  YAQ
Sbjct: 428 GRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQ 487

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG+  + L++F +M+    + D ++F+ V++A +H+G V +G QYF  M+ +  I PT E
Sbjct: 488 HGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPE 547

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFA-ASATVWRTVLAACR--------------LIS 663
            Y C+VDL  RAG +++A+DI+ ++        +W T+L ACR              ++ 
Sbjct: 548 LYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLE 607

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
             P  S  YV+LSN+YAA G W    R+RKLM  R VKKE G S IE+ N+ + FL GD 
Sbjct: 608 RDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDR 667

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
           SHP+ + IY++L+ L++ ++ AGY PDT  +L D++DE KE +L  HSERLAIAFGL++T
Sbjct: 668 SHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMST 727

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P G PL+++KNLRVC DCHT  K ISKL  R+I+VRDT+RFH+FK+G CSC DYW
Sbjct: 728 PPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 271/557 (48%), Gaps = 9/557 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +F+   +++   + R++  YC+   +  AL +F  ++   +     T  ++L  C   
Sbjct: 60  QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 119

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G ++H + ++ GF  DV V T+L+++Y +  +V      F  +   +VVSWT+++
Sbjct: 120 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +   ++        L+ RMQ++G+ PN  T  TV     D   ++    ++++V     E
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N+ ++M+  + ++ DAR +F+ M DRD +TWN ++  YV NE   EA   F  +
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +    TFV ++ +  +   L   + +H  V + G D D  + T LM  Y +C   
Sbjct: 300 QQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A KIF  M   KDV++WT M   + QNG    A+  F +M  EG RP   T   +L  
Sbjct: 360 GQAWKIFVDMGS-KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 418

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              ++      Q+H+HII+  +     V TAL+N Y K G + EA  VFE + ++DI+ W
Sbjct: 419 CAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVW 478

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++ML  YAQ G  +  ++++ Q+  +G K +  +F SV++A +  S +V  G Q+    +
Sbjct: 479 NSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALS-HSGSVTDGYQYFVAML 537

Query: 508 KA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQRK--RDLVSWNSMICGYAQHGHTKK 564
           +   +     +   +V +  + G I+ A ++  +      D + W +++     H  T +
Sbjct: 538 QDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQ 597

Query: 565 ALEVFKEMRRQDLEFDG 581
           A    +++  +D    G
Sbjct: 598 AKAAAEQVLERDPSHSG 614



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 244/488 (50%), Gaps = 8/488 (1%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
            KP++  F  +L   +    V    +VH  V   G E    VC  LI MY +   V +A+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            VF+ +E +D   W  M+  Y     +  A   F  M       T+ T+V+++  CA+T+
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            L+   ++H Q+L+ G + D  + T L+  Y+KCG +  A   F  + E +DVVSWTAMI
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMI 179

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYE 410
           +  +Q+    LA   + +M  +GV PN  T   +  A            +++ +     E
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
               V  + +N +   G+L +A ++FE + ++D+V W+ ++  Y Q  +   AV+++ +L
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
             +G+K N+ TF  ++N  T+ + ++ +GK  H    +A  +  + V++AL+++Y +   
Sbjct: 300 QQDGIKANDITFVLMLNVYTSLT-SLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
              A ++F     +D+++W  M   YAQ+G  K+AL++F+EM+ +       T + V+  
Sbjct: 359 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 418

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C H   + +G+Q    ++ E+     M   + ++++Y + G + +A  +  +M       
Sbjct: 419 CAHLAALQKGRQIHSHII-ENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDIL 476

Query: 651 VWRTVLAA 658
           VW ++L A
Sbjct: 477 VWNSMLGA 484


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 299/844 (35%), Positives = 487/844 (57%), Gaps = 49/844 (5%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL--------FGS--TLSS 83
            +F+    +    +N ++  YCR      A  LF  ++R    L        F S  T++ 
Sbjct: 200  VFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVAC 259

Query: 84   VLKTCG-CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
             L  CG  L + +  R       KS F +D+ V ++LV  + R   ++  + +F+ M++ 
Sbjct: 260  SLVDCGLTLLEQMLAR-----IEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDR 314

Query: 143  NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD-----EGIVAT 197
            N V+   L+ G AR    +   ++F  M+ + ++ N+ +++ +L    +     EG    
Sbjct: 315  NAVTMNGLMVGLARQHQGEEAAKIFKEMK-DLVEINASSYAVLLSAFTEFSNLKEG-KRK 372

Query: 198  AVQVHTMVIKNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
              +VH  +I+N   +V   + NAL+++Y K   + +AR++F  M  +D+++WNS+++G  
Sbjct: 373  GQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLD 432

Query: 257  TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
             NE   EA   F+ M   G   ++ + +S +  CA+   + L +Q+H + +K G+D D +
Sbjct: 433  HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492

Query: 317  IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNFFCQMTR 375
            +   L+  Y++   ME+  K+F +M E  D VSW + I     + A  L A+ +F +M +
Sbjct: 493  VSNALLTLYAETDCMEEYQKVFFLMPEY-DQVSWNSFIGALATSEASVLQAIKYFLEMMQ 551

Query: 376  EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
             G +PN  T+  IL+A  ++S      Q+HA I+K +     ++   LL  Y K   +++
Sbjct: 552  AGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMED 611

Query: 432  AAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
               +F  + E+ D V+W+AM++GY   G    A+ +   +  +G + ++FT ++V++AC 
Sbjct: 612  CEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSAC- 670

Query: 491  APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
            A  A +E+G + HAC+I+A L   + V SALV MY+K G I+ AS  F+    R++ SWN
Sbjct: 671  ASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWN 730

Query: 551  SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
            SMI GYA+HGH  KAL++F +M++     D +TF+GV++AC+H GLVDEG ++F  M   
Sbjct: 731  SMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEV 790

Query: 611  HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----------- 659
            + + P +EH+SCMVDL  RAG ++K  + I  MP   +A +WRT+L AC           
Sbjct: 791  YELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELG 850

Query: 660  -----RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNK 714
                  LI L+P ++  YVLLSNM+AA G W++    R  M + +VKKEAG SW+ +K+ 
Sbjct: 851  RRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDG 910

Query: 715  TYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERL 774
             + F+AGD +HP+  +IY KL+E+  +++D GY P+T Y L D++ E+KE +LS HSE+L
Sbjct: 911  VHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKL 970

Query: 775  AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
            AIAF ++   +  P++I+KNLRVCGDCHT  K IS +  R I++RD+NRFHHF  G+CSC
Sbjct: 971  AIAF-VLTRQSELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSC 1029

Query: 835  GDYW 838
             DYW
Sbjct: 1030 QDYW 1033



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 179/638 (28%), Positives = 309/638 (48%), Gaps = 34/638 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD  PQ+N V ++ L+  Y ++ +  EA  LF GI   GL      + S L+ C  L
Sbjct: 94  QKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQEL 153

Query: 92  FDHV--FGRQVHCECVKSGFARDVNVSTSLVDLYMRTN-NVEDGRRVFDDMNESNVVSWT 148
             ++   G ++H    KS +A D+ +S  L+ +Y   + +++D RRVF+++      SW 
Sbjct: 154 GPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWN 213

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGI----KPNSFTFSTVLGV---LADEGIVATAVQV 201
           S++S Y R        +LF  MQ E      +PN +TF +++ V   L D G+     Q+
Sbjct: 214 SIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLE-QM 272

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
              + K+       V +AL+S + +  ++  A+ +F+ M+DR+++T N ++ G       
Sbjct: 273 LARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQG 332

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL----RLARQLHSQVLKNG-IDFDHN 316
            EA + F  M     E+  S++  ++        L    R  +++H+ +++N  +D    
Sbjct: 333 EEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWIL 391

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           I   L+  Y+KC  +++A  IF +M   KD VSW ++ISG   N   + AV  F  M R 
Sbjct: 392 IGNALVNLYAKCNAIDNARSIFQLMPS-KDTVSWNSIISGLDHNERFEEAVACFHTMRRN 450

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           G+ P+ F+    L++  ++       Q+H   IK   +   SV  ALL  Y +   ++E 
Sbjct: 451 GMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEY 510

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQI-GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
            KVF L+ E D V+W++ +   A        A+K + ++   G KPN  TF + I +  +
Sbjct: 511 QKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFIN-ILSAVS 569

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWN 550
             + +E G+Q HA  +K  + +   + + L+  Y K   +E    +F R   +RD VSWN
Sbjct: 570 SLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWN 629

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           +MI GY  +G   KA+ +   M ++    D  T   V++AC     ++ G +     V+ 
Sbjct: 630 AMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGME-----VHA 684

Query: 611 HHIYPTMEHY----SCMVDLYSRAGMLEKAMDIINRMP 644
             I   +E      S +VD+Y++ G ++ A      MP
Sbjct: 685 CAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMP 722



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 183/722 (25%), Positives = 339/722 (46%), Gaps = 87/722 (12%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
             Q+H +  K+G   DV    +LV++++R  N+   +++FD+M + N+VSW+ L+SGYA+
Sbjct: 58  AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQ 117

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG--IVATAVQVHTMVIKNGGEVVT 214
           N M D    LF  +   G+ PN +   + L    + G  ++   +++H ++ K+      
Sbjct: 118 NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDM 177

Query: 215 SVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            + N L+SMY   S  + DAR VF+ ++ + S +WNS+++ Y      + AF+ F++M  
Sbjct: 178 VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237

Query: 274 AGAEL----TRSTFVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
              EL       TF S++ +  +  +  L L  Q+ +++ K+    D  + + L+  +++
Sbjct: 238 EATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFAR 297

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G ++ A  IF  M + ++ V+   ++ G  +    + A   F +M ++ V  N  +Y++
Sbjct: 298 YGLIDSAKMIFEQMDD-RNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAV 355

Query: 388 ILTAQPAVSPF--------QVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           +L+A    S          +VHA++I+    +    +G AL+N Y K   +D A  +F+L
Sbjct: 356 LLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQL 415

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD V+W+++++G       E AV  +  +   G+ P++F+  S +++C A    +  
Sbjct: 416 MPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSC-ASLGWIML 474

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA- 557
           G+Q H   IK  L+  + VS+AL+T+Y++   +E   +VF    + D VSWNS I   A 
Sbjct: 475 GQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALAT 534

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE------- 610
                 +A++ F EM +   + + +TFI +++A +   L++ G+Q   +++         
Sbjct: 535 SEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNA 594

Query: 611 ------------------HHIYPTMEH------YSCMVDLYSRAGMLEKAMDIINRMPFA 646
                               I+  M        ++ M+  Y   G+L KAM ++  M   
Sbjct: 595 IENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQK 654

Query: 647 ASAT---VWRTVLAACRLIS-----LQPHDSAIYVLLS----------NMYAATGHWQER 688
                     TVL+AC  ++     ++ H  AI   L           +MYA  G     
Sbjct: 655 GQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYA 714

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
           +R  +LM  R +     YSW        S ++G   H        K  +L T++K  G  
Sbjct: 715 SRFFELMPVRNI-----YSW-------NSMISGYARHGHG----GKALKLFTQMKQHGQL 758

Query: 749 PD 750
           PD
Sbjct: 759 PD 760



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 274/566 (48%), Gaps = 50/566 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F   P ++ V +N ++     +   +EA+  F  +RR G+     ++ S L +C  L
Sbjct: 410 RSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASL 469

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              + G+Q+H E +K G   DV+VS +L+ LY  T+ +E+ ++VF  M E + VSW S +
Sbjct: 470 GWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFI 529

Query: 152 SGYARNKMND-RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
              A ++ +  + ++ F  M   G KPN  TF  +L  ++   ++    Q+H +++K+  
Sbjct: 530 GALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSV 589

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYVTNELHMEAFETFN 269
               ++ N L++ Y K + + D   +F  M E RD ++WN+M++GY+ N +  +A     
Sbjct: 590 ADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVW 649

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G  L   T  +V+  CA+   L    ++H+  ++  ++ +  + + L+  Y+KCG
Sbjct: 650 LMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCG 709

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           K++ AS+ F +M  ++++ SW +MISG+ ++G    A+  F QM + G  P+  T+  +L
Sbjct: 710 KIDYASRFFELM-PVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVL 768

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           +A         H  ++   +E   S+G                 +V+EL     I  +S 
Sbjct: 769 SACS-------HVGLVDEGFEHFKSMG-----------------EVYELAPR--IEHFSC 802

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-APSAAVEQGKQFHACSIK 508
           M+    + GD +   K+   + +  + PN   + +++ AC  A S   E G++     I+
Sbjct: 803 MVDLLGRAGDVK---KLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIE 859

Query: 509 AKLNNALCVSSALVT-MYSKKGNIESASEVFKRQRKRDL-----VSWNSM-------ICG 555
            +  NA  V+  L++ M++  G  E   E     R  ++      SW +M       + G
Sbjct: 860 LEPLNA--VNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAG 917

Query: 556 YAQHGHTKKALEVFKEM--RRQDLEF 579
              H   +K  +  KE+  + +DL +
Sbjct: 918 DQTHPEKEKIYDKLKEIMNKMRDLGY 943



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 219/429 (51%), Gaps = 19/429 (4%)

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
           D   V  A Q+H  + K G       CN L+++++++  +  A+ +FD M  ++ ++W+ 
Sbjct: 51  DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT--TKELRLARQLHSQVLK 308
           +V+GY  N +  EA   F  +  AG         S ++ C       L+L  ++H  + K
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170

Query: 309 NGIDFDHNIRTGLMVAYSKC-GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           +    D  +   LM  YS C   ++DA ++F  ++ MK   SW ++IS + + G    A 
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIK-MKTSASWNSIISVYCRRGDAISAF 229

Query: 368 NFFCQMTREGV----RPNGFTYSIILTAQPAVSPF------QVHAHIIKTNYEKSFSVGT 417
             F  M RE      RPN +T+  ++T   ++         Q+ A I K+++ K   VG+
Sbjct: 230 KLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGS 289

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           AL++ + + G++D A  +FE +D+++ V  + ++ G A+    E A KI++++  + V+ 
Sbjct: 290 ALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEI 348

Query: 478 NEFTFSSVINACTAPSAAVE---QGKQFHACSIKAKLNNA-LCVSSALVTMYSKKGNIES 533
           N  +++ +++A T  S   E   +G++ HA  I+  L +  + + +ALV +Y+K   I++
Sbjct: 349 NASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDN 408

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A  +F+    +D VSWNS+I G   +   ++A+  F  MRR  +     + I  +++C  
Sbjct: 409 ARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCAS 468

Query: 594 AGLVDEGQQ 602
            G +  GQQ
Sbjct: 469 LGWIMLGQQ 477


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 299/866 (34%), Positives = 461/866 (53%), Gaps = 67/866 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL------PLFGSTLSSVL 85
           + +FD    R+ V +N L   Y      Q+ LN+F   R++GL      PL   T+SS+L
Sbjct: 95  RRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVF---RKMGLNKVKANPL---TVSSIL 148

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C  L D   G+++H   V+ G   DV VS++ V+ Y +   V + + VFD M   +VV
Sbjct: 149 PGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVV 208

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +W SL S Y       + L +F  M ++G+KP+  T S +L   +D   + +   +H   
Sbjct: 209 TWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFA 268

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K+G      V NAL+++Y     VR+A+AVFD M  R+ ITWNS+ + YV      +  
Sbjct: 269 LKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGL 328

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F  MGL G +       S++  C+  K+L+  + +H   +K+G+  D  + T L+  Y
Sbjct: 329 NVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLY 388

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           + C  + +A  +F +M   ++VV+W ++ S ++  G     +N F +M   GV+P+  T 
Sbjct: 389 ANCLCVREAQTVFDLMPH-RNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTM 447

Query: 386 SIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             IL A    Q   S   +H   ++    +   V  ALL+ Y K   + EA  VF+LI  
Sbjct: 448 LSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPH 507

Query: 442 KDIVAWSAMLAGY-----------------------------AQIGDT------EGAVKI 466
           +++ +W+ +L  Y                               IG        E A++I
Sbjct: 508 REVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEI 567

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           +R++ + G KP+E T  S++ AC+  S  +  GK+ H    +   +  L  ++ALV MY+
Sbjct: 568 FRKMQTMGFKPDETTIYSILRACSL-SECLRMGKEIHCYVFRHWKDWDLARTNALVDMYA 626

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G +  +  VF     +D+ SWN+MI     HG+ K+AL +F++M    ++ D  TF  
Sbjct: 627 KCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTC 686

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V++AC+H+ LV+EG Q F+ M  +H + P  EHY+C+VD+YSRAG LE+A   I RMP  
Sbjct: 687 VLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME 746

Query: 647 ASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
            +A  W+  LA CR              L  + P+ SA YV L N+      W E +++R
Sbjct: 747 PTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIR 806

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           KLM +R + K  G SW  V N+ ++F+AGD S+ +S++IY+ L+EL  ++K AGYKPDT 
Sbjct: 807 KLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTD 866

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
           YVL DID E K   L  HSE+LA+AFG++     + +++ KNLR+CGDCH  IK +S + 
Sbjct: 867 YVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVV 926

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
              IVVRD+ RFHHFK G CSC D+W
Sbjct: 927 GVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 161/639 (25%), Positives = 301/639 (47%), Gaps = 41/639 (6%)

Query: 58  LHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVST 117
           L  EA+ ++   R  G+        +V K C    D +  +Q H +  + G   DV++  
Sbjct: 20  LPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGN 79

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           + +  Y +   VE  RRVFDD+   +VV+W SL + Y       + L +F +M +  +K 
Sbjct: 80  AFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKA 139

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           N  T S++L   +D   + +  ++H  V+++G      V +A ++ Y K   VR+A+ VF
Sbjct: 140 NPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF 199

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           D M  RD +TWNS+ + YV      +    F  M L G +    T   ++  C+  ++L+
Sbjct: 200 DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLK 259

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
             + +H   LK+G+  +  +   L+  Y  C  + +A  +F +M   ++V++W ++ S +
Sbjct: 260 SGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPH-RNVITWNSLASCY 318

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSF 413
           +  G     +N F +M   GV+P+    S IL A   +   +    +H   +K    +  
Sbjct: 319 VNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDV 378

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            V TAL+N Y     + EA  VF+L+  +++V W+++ + Y   G  +  + ++R++   
Sbjct: 379 FVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLN 438

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           GVKP+  T  S+++AC+     ++ GK  H  +++  +   + V +AL+++Y+K   +  
Sbjct: 439 GVKPDLVTMLSILHACS-DLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVRE 497

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A  VF     R++ SWN ++  Y  +   +K L +F +M R +++ D IT+  VI  C  
Sbjct: 498 AQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVK 557

Query: 594 AGLVDEGQQYFDIM------VNEHHIYPTMEHYS-------------------------- 621
              ++E  + F  M       +E  IY  +   S                          
Sbjct: 558 NSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLAR 617

Query: 622 --CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
              +VD+Y++ G L  + ++ + MP     + W T++ A
Sbjct: 618 TNALVDMYAKCGGLSLSRNVFDMMPIKDVFS-WNTMIFA 655



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 276/580 (47%), Gaps = 56/580 (9%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY+K     + Q++FD  P R+ V +N L   Y      Q+ LN+F  +   G+     T
Sbjct: 185 FYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVT 244

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           +S +L  C  L D   G+ +H   +K G   +V VS +LV+LY     V + + VFD M 
Sbjct: 245 VSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP 304

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             NV++W SL S Y       + L +F  M + G+KP+    S++L   +    + +   
Sbjct: 305 HRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKT 364

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H   +K+G      VC AL+++Y     VR+A+ VFD M  R+ +TWNS+ + YV    
Sbjct: 365 IHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGF 424

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             +    F  M L G +    T +S++  C+  ++L+  + +H   +++G+  D  +   
Sbjct: 425 PQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNA 484

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KC  + +A  +F ++   ++V SW  +++ +  N   +  +  F QM R+ V+ 
Sbjct: 485 LLSLYAKCVCVREAQVVFDLIPH-REVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKA 543

Query: 381 NGFTYSIILTA-------QPAVSPF--------------------------------QVH 401
           +  T+S+++         + A+  F                                ++H
Sbjct: 544 DEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIH 603

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
            ++ +   +   +   AL++ Y K G L  +  VF+++  KD+ +W+ M+      G+ +
Sbjct: 604 CYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGK 663

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACS----IKAKLNNALC 516
            A+ ++ ++    VKP+  TF+ V++AC+  S  VE+G Q F++ S    ++ +  +  C
Sbjct: 664 EALSLFEKMLLSMVKPDSATFTCVLSACSH-SMLVEEGVQIFNSMSRDHLVEPEAEHYTC 722

Query: 517 VSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICG 555
           V    V +YS+ G +E A    +R   +   ++W + + G
Sbjct: 723 V----VDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 201/408 (49%), Gaps = 9/408 (2%)

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           + + L  EA + + +    G +  +  F++V K CA +++    +Q H    + G+  D 
Sbjct: 16  IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
           +I    + AY KC  +E A ++F  +   +DVV+W ++ + ++  G     +N F +M  
Sbjct: 76  SIGNAFIHAYGKCKCVEGARRVFDDLVA-RDVVTWNSLSACYVNCGFPQQGLNVFRKMGL 134

Query: 376 EGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
             V+ N  T S IL      Q   S  ++H  +++    +   V +A +N Y K   + E
Sbjct: 135 NKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVRE 194

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A  VF+L+  +D+V W+++ + Y   G  +  + ++R++  +GVKP+  T S +++AC+ 
Sbjct: 195 AQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS- 253

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
               ++ GK  H  ++K  +   + VS+ALV +Y     +  A  VF     R++++WNS
Sbjct: 254 DLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNS 313

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +   Y   G  +K L VF+EM    ++ D +    ++ AC+    +  G+      V +H
Sbjct: 314 LASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV-KH 372

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
            +   +   + +V+LY+    + +A  + + MP     T W + L++C
Sbjct: 373 GMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVT-WNS-LSSC 418


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/775 (34%), Positives = 444/775 (57%), Gaps = 21/775 (2%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           ++L+ C    +   GR+VH      GF ++  V   L+ +Y +  +V + ++VF+ +   
Sbjct: 9   ALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILERK 68

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +V +WT ++  Y +    DR L +F++MQ E + P   T+  +L   A    +   +++H
Sbjct: 69  DVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIH 128

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             +++ G E    V  ALI+MY K   VR A   F  +E RD ++W +M+A  V ++   
Sbjct: 129 GQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFA 188

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            A   +  M L G    + T  +V         L   + ++  V    ++ D  +    +
Sbjct: 189 LARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAV 248

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             +   G + DA ++F  M + +DVV+W  +I+ ++QN     AV  F ++ ++GV+ N 
Sbjct: 249 NMFGNAGLLGDARRLFEDMVD-RDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKAND 307

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T+ ++L    +++       +H  + +  Y++   V TAL++ Y +     +A K+F  
Sbjct: 308 ITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVD 367

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD++ W+ M   YAQ G  + A+++++++  EG +P   T  +V++ C A  AA+++
Sbjct: 368 MGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC-AHLAALQK 426

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G+Q H+  I+ +    + V +AL+ MY K G +  A  VF++  KRD++ WNSM+  YAQ
Sbjct: 427 GRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQ 486

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG+  + L++F +M+   ++ D ++F+ V++A +H+G V +G QYF  M+ +  I PT E
Sbjct: 487 HGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPE 546

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFA-ASATVWRTVLAACR--------------LIS 663
            Y C+VDL  RAG +++A+DI+ ++        +W T+L ACR              ++ 
Sbjct: 547 LYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLE 606

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
             P  S  YV+LSN+YAA G W    R+RKLM  R VKKE G S IE+ N+ + FL GD 
Sbjct: 607 RDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDR 666

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
           SHP+ + IY++L+ L++ ++ AGY PDT  +L D++DE KE +L  HSERLAIAFGL++T
Sbjct: 667 SHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLIST 726

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P G PL+++KNLRVC DCHT  K ISKL  R+I+VRDT+RFH+FK+G CSC DYW
Sbjct: 727 PPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 271/557 (48%), Gaps = 9/557 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +F+   +++   + R++  YC+   +  AL +F  ++   +     T  ++L  C   
Sbjct: 59  QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 118

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G ++H + ++ GF  DV V T+L+++Y +  +V      F  +   +VVSWT+++
Sbjct: 119 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 178

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +   ++        L+ RMQ++G+ PN  T  TV     D   ++    V+ +V     E
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVME 238

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N+ ++M+  + ++ DAR +F+ M DRD +TWN ++  YV NE   EA   F  +
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +    TFV ++ +  +   L   + +H  V + G D D  + T LM  Y +C   
Sbjct: 299 QQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAP 358

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A KIF  M   KDV++WT M   + QNG    A+  F +M  EG RP   T   +L  
Sbjct: 359 GQAWKIFVDMGS-KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 417

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              ++      Q+H+HII+  +     V TAL+N Y K G + EA  VFE + ++DI+ W
Sbjct: 418 CAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVW 477

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++ML  YAQ G  +  ++++ Q+  +GVK +  +F SV++A +  S +V  G Q+    +
Sbjct: 478 NSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALS-HSGSVTDGYQYFVAML 536

Query: 508 KA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQRK--RDLVSWNSMICGYAQHGHTKK 564
           +   +     +   +V +  + G I+ A ++  +      D + W +++     H  T +
Sbjct: 537 QDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQ 596

Query: 565 ALEVFKEMRRQDLEFDG 581
           A    +++  +D    G
Sbjct: 597 AKAAAEQVLERDPSHSG 613



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 244/487 (50%), Gaps = 8/487 (1%)

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           KP++  F  +L   +    V    +VH  V   G E    VC  LI MY +   V +A+ 
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           VF+ +E +D   W  M+  Y     +  A   F  M       T+ T+V+++  CA+T+ 
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           L+   ++H Q+L+ G + D  + T L+  Y+KCG +  A   F  + E +DVVSWTAMI+
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIA 179

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEK 411
             +Q+    LA   + +M  +GV PN  T   +  A    +       V+  +     E 
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMES 239

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              V  + +N +   G+L +A ++FE + ++D+V W+ ++  Y Q  +   AV+++ +L 
Sbjct: 240 DVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQ 299

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
            +GVK N+ TF  ++N  T+ + ++ +GK  H    +A  +    V++AL+++Y +    
Sbjct: 300 QDGVKANDITFVLMLNVYTSLT-SLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAP 358

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
             A ++F     +D+++W  M   YAQ+G  K+AL++F+EM+ +       T + V+  C
Sbjct: 359 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 418

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
            H   + +G+Q    ++ E+     M   + ++++Y + G + +AM +  +M       V
Sbjct: 419 AHLAALQKGRQIHSHII-ENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDILV 476

Query: 652 WRTVLAA 658
           W ++L A
Sbjct: 477 WNSMLGA 483


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 271/764 (35%), Positives = 433/764 (56%), Gaps = 26/764 (3%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
             +Q+H   V SG  + + +S  L++ Y    ++   R  FD +   +V +W S++S YA
Sbjct: 58  LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYA 117

Query: 156 RNKMNDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           R       ++ F+  +    ++ + +TF  V+      G +    +VH +V+K G E   
Sbjct: 118 RIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDV 174

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            +  + I  Y +   V  A  +FD M  RD  TWN+M++G+  N    EA E F+ M   
Sbjct: 175 YIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFK 234

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
              +   T  S++ +C    ++     +H   +K G++FD  +   L+  Y+K G++  A
Sbjct: 235 SVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSA 294

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             IF+ M+ ++D+VSW ++++   QN    +A+  + +M   GV P+  T   + +    
Sbjct: 295 ETIFNQMK-VRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAE 353

Query: 395 VSPF----QVHAHIIK-TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           +  F     +H  + +   +    ++G A+++ Y K G +D A KVFE +  KD+++W++
Sbjct: 354 LGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNS 413

Query: 450 MLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           ++ GY+Q G    A+ +Y  +    G  PN+ T+ S++ A  +   A++QG + H   IK
Sbjct: 414 LITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTA-HSQLGALKQGMKAHGQLIK 472

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L   + VS+ LV MY K G +  A  +F     +  VSWN++I  +  HG+  KA+++
Sbjct: 473 NFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKL 532

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           FKEM+ + ++ D ITF+ +++AC+H+GLVDEGQ  F +M   + I P+++HY CMVDL+ 
Sbjct: 533 FKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFG 592

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG LEKA + +  MP     +VW  +L ACR              L+ ++  +   YVL
Sbjct: 593 RAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVL 652

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA  GHW+    VR L  DR +KK  G+S IEV  K   F  G+ +HP+  +IYS+
Sbjct: 653 LSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSE 712

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L  L+ ++K  GY PD ++VLQD++D+ KE IL+ HSERLA+AFG+++TP    LQI KN
Sbjct: 713 LRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKN 772

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCH   K ISK+  R+I+VRD+NRFHHFK+G+CSCGDYW
Sbjct: 773 LRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 267/531 (50%), Gaps = 20/531 (3%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEAL---NLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           FD+   ++   +N ++  Y R      A+   N FL    L    +  T   V++ CG L
Sbjct: 98  FDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHY--TFPPVIRACGNL 155

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR+VHC  +K GF  DV ++ S +  Y R   V     +FD+M   ++ +W +++
Sbjct: 156 DD---GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMI 212

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG+  N      LE+F  M+ + +  +S T S++L +      + + V +H   IK G E
Sbjct: 213 SGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLE 272

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               VCNALI+MY K   +R A  +F+ M+ RD ++WNS++A +  N+  + A   +N M
Sbjct: 273 FDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKM 332

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCG 329
              G      T VS+  + A       +R +H  V +    F H+I  G  ++  Y+K G
Sbjct: 333 HSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCW-FLHDIALGNAIIDMYAKLG 391

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT-REGVRPNGFTYSII 388
            ++ A K+F  +  +KDV+SW ++I+G+ QNG  + A++ +  M    G  PN  T+  I
Sbjct: 392 FIDSARKVFEGL-PVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSI 450

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           LTA   +       + H  +IK        V T L++ Y K G L +A  +F  +  +  
Sbjct: 451 LTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSS 510

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FH 503
           V+W+A+++ +   G    AVK+++++ SEGVKP+  TF S+++AC+  S  V++G+  F 
Sbjct: 511 VSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSH-SGLVDEGQWCFQ 569

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMI 553
                  +  +L     +V ++ + G++E A    K    R D+  W +++
Sbjct: 570 LMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALL 620



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 235/485 (48%), Gaps = 44/485 (9%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           V  A Q+H +++ +G      +   LI+ Y     +  AR  FD ++ +D  TWNSM++ 
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 255 YVTNELHMEAFETFNN-MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           Y        A + FN  +  +  +    TF  VI+ C    +    R++H  VLK G + 
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFEC 172

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  I    +  YS+ G +  A  +F  M  ++D+ +W AMISG   NG +  A+  F +M
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMM-IRDIGTWNAMISGFYLNGKVAEALEVFDEM 231

Query: 374 TREGVRPNGFTYS----IILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             + V  +  T S    I +     +S   +H + IK   E    V  AL+N Y K G L
Sbjct: 232 RFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGEL 291

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             A  +F  +  +DIV+W+++LA + Q      A+ +Y ++ S GV P+  T  S+    
Sbjct: 292 RSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSL---- 347

Query: 490 TAPSAAVEQGKQFHACSIKAKLN------NALCVSSALVTMYSKKGNIESASEVFKRQRK 543
              S A E G    + SI   +       + + + +A++ MY+K G I+SA +VF+    
Sbjct: 348 --ASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPV 405

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF-DGITFIGVITACTHAGLVDEGQQ 602
           +D++SWNS+I GY+Q+G   +A++V+  MR       +  T++ ++TA +  G + +G +
Sbjct: 406 KDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMK 465

Query: 603 ----------YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
                     YFDI V+           +C+VD+Y + G L  A+ +   +P  +S + W
Sbjct: 466 AHGQLIKNFLYFDIFVS-----------TCLVDMYGKCGKLADALSLFYEVPHQSSVS-W 513

Query: 653 RTVLA 657
             +++
Sbjct: 514 NAIIS 518



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 262/569 (46%), Gaps = 53/569 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +LFD    R+   +N ++  +  +    EAL +F  +R   + +   T+SS+L  C  L 
Sbjct: 195 NLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLD 254

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D + G  +H   +K G   D+ V  +L+++Y +   +     +F+ M   ++VSW SLL+
Sbjct: 255 DIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLA 314

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            + +NK     L ++++M   G+ P+  T  ++  V A+ G   ++  +H  V +    +
Sbjct: 315 AFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFL 374

Query: 213 -VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              ++ NA+I MY K   +  AR VF+G+  +D I+WNS++ GY  N L  EA + +++M
Sbjct: 375 HDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSM 434

Query: 272 G-LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
              +GA   + T+VS++   +    L+   + H Q++KN + FD  + T L+  Y KCGK
Sbjct: 435 RYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGK 494

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           + DA  +F  +   +  VSW A+IS H  +G    AV  F +M  EGV+P+  T+     
Sbjct: 495 LADALSLFYEVPH-QSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITF----- 548

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE-----KDIV 445
                                      +LL+A    G++DE    F+L+ E       + 
Sbjct: 549 --------------------------VSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLK 582

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            +  M+  + + G  E A    + +    V+P+   + +++ AC      VE  +     
Sbjct: 583 HYGCMVDLFGRAGHLEKAFNFVKNMP---VRPDVSVWGALLGACRI-HENVELVRTVSDH 638

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL---VSWNSMICG------Y 556
            +K +  N +     L  +Y+K G+ E   EV    R R L     W+S+         Y
Sbjct: 639 LLKVESEN-VGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFY 697

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFI 585
             +    K  E++ E+R    +   I ++
Sbjct: 698 TGNQTHPKCEEIYSELRNLTAKMKSIGYV 726



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%)

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           E  F+ +   CT     V   KQ HA  + +    ++ +S+ L+  Y+  G+I  A   F
Sbjct: 43  EIDFNRIFLYCTK----VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTF 98

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE-MRRQDLEFDGITFIGVITACTHAGLV 597
            + + +D+ +WNSMI  YA+ GH   A++ F E +    L+ D  TF  VI AC   G +
Sbjct: 99  DQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNL 155

Query: 598 DEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           D+G++   +++    E  +Y      +  +  YSR G +  A ++ + M
Sbjct: 156 DDGRKVHCLVLKLGFECDVYIA----ASFIHFYSRFGFVSLACNLFDNM 200


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 275/751 (36%), Positives = 438/751 (58%), Gaps = 21/751 (2%)

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K+G  ++    T LV L+ R  +V++  RVF+ +++   V + ++L G+A+    D+ L+
Sbjct: 62  KNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALK 121

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
            F RM+ + ++P  + F+ +L V  DE  +    ++H +++K+G  +       L +MY 
Sbjct: 122 FFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K + V +AR VFD M +RD ++WN++VAGY  N +   A E  N M     + +  T VS
Sbjct: 182 KCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVS 241

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+   +  + +R+ +++H   ++ G D   NI T L+  Y+KCG ++ A  +F  M E +
Sbjct: 242 VLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLE-R 300

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VH 401
           +VVSW +MI  ++QN     A+  F +M  EGV+P   +    L A   +   +    +H
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH 360

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
              ++   +++ SV  +L++ Y K   +D AA +F  +  + IV+W+AM+ G+AQ G   
Sbjct: 361 KLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPI 420

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+  + Q+ +  VKP+ FT+ SVI A  A  +     K  H   ++  L+  + V++AL
Sbjct: 421 EALNYFSQMQARTVKPDTFTYVSVITA-IAELSITHHAKWIHGVVMRNCLDKNVFVTTAL 479

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           V MY+K G I  A  +F    +R + +WN+MI GY  HG  K ALE+F+EM++  +  +G
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNG 539

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +TF+ VI+AC+H+GLV+ G + F +M   + I P+M+HY  MVDL  RAG L +A D I 
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIM 599

Query: 642 RMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQE 687
           +MP   +  V+  +L AC              RL  L P D   +VLL+N+Y A   W++
Sbjct: 600 QMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEK 659

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
             +VR  M  + ++K  G S +E+KN+ +SF +G  +HP S +IY+ LE+L  ++K+AGY
Sbjct: 660 VGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGY 719

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            PDT+ +L  ++D+ KE +LS HSE+LAI+FGL+ T AG  + + KNLRVC DCH   K 
Sbjct: 720 VPDTNLIL-GLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKY 778

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           IS +  R+I+VRD  RFHHFK G CSCGDYW
Sbjct: 779 ISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 283/539 (52%), Gaps = 9/539 (1%)

Query: 27  YSKKDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           Y   D++  +F+   ++  V Y  +L  + + S   +AL  F+ +R   +       + +
Sbjct: 82  YGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYL 141

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           LK CG   +   G+++H   VKSGF+ D+   T L ++Y +   V + R+VFD M E ++
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDL 201

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSW ++++GY++N M    LE+ + M  E +KP+  T  +VL  ++   ++    ++H  
Sbjct: 202 VSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGY 261

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            ++ G + + ++  AL+ MY K   ++ AR +FDGM +R+ ++WNSM+  YV NE   EA
Sbjct: 262 AMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEA 321

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F  M   G + T  + +  +  CA   +L   R +H   ++  +D + ++   L+  
Sbjct: 322 MVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISM 381

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KC +++ A+ +F  ++  + +VSW AMI G  QNG    A+N+F QM    V+P+ FT
Sbjct: 382 YCKCKEVDTAASMFGKLQS-RTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFT 440

Query: 385 YSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           Y  ++TA   +S       +H  +++   +K+  V TAL++ Y K G +  A  +F+++ 
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG- 499
           E+ +  W+AM+ GY   G  + A++++ ++    ++PN  TF SVI+AC+  S  VE G 
Sbjct: 501 ERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSH-SGLVEAGL 559

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           K FH       +  ++    A+V +  + G +  A +   +   +  V+    + G  Q
Sbjct: 560 KCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 186/321 (57%), Gaps = 11/321 (3%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           +++ C++ KELR    L   + KNG+  +H  +T L+  + + G +++A+++F  + +  
Sbjct: 43  LLERCSSLKELRHILPL---IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKL 99

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT-----AQPAVSPFQV 400
           +V+ +T M+ G  +   +D A+ FF +M  + V P  + ++ +L      A+  V   ++
Sbjct: 100 NVLYYT-MLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGK-EI 157

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  ++K+ +       T L N Y K   + EA KVF+ + E+D+V+W+ ++AGY+Q G  
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A+++   +  E +KP+  T  SV+ A +A    +  GK+ H  +++A  ++ + +++A
Sbjct: 218 RMALEMVNLMCEENLKPSFITIVSVLPAVSALR-LIRIGKEIHGYAMRAGFDSLVNIATA 276

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LV MY+K G++++A  +F    +R++VSWNSMI  Y Q+ + K+A+ +F++M  + ++  
Sbjct: 277 LVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPT 336

Query: 581 GITFIGVITACTHAGLVDEGQ 601
            ++ +G + AC   G ++ G+
Sbjct: 337 DVSVMGALHACADLGDLERGR 357



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 138/263 (52%), Gaps = 19/263 (7%)

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I K    +     T L++ + + G +DEAA+VFE ID+K  V +  ML G+A++ D + A
Sbjct: 60  IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKA 119

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           +K + ++  + V+P  + F+ ++  C    A +  GK+ H   +K+  +  L   + L  
Sbjct: 120 LKFFVRMRDDEVEPVVYNFTYLLKVC-GDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY+K   +  A +VF R  +RDLVSWN+++ GY+Q+G  + ALE+   M  ++L+   IT
Sbjct: 179 MYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFIT 238

Query: 584 FIGVITACTHAGLVDEGQQY--------FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            + V+ A +   L+  G++         FD +VN           + +VD+Y++ G L+ 
Sbjct: 239 IVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNI---------ATALVDMYAKCGSLKT 289

Query: 636 AMDIINRMPFAASATVWRTVLAA 658
           A  + + M    +   W +++ A
Sbjct: 290 ARLLFDGM-LERNVVSWNSMIDA 311


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/782 (35%), Positives = 448/782 (57%), Gaps = 20/782 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+    R+ V +  +L  Y ++ L +EAL L+  + R G+      LSSVL +C     
Sbjct: 99  VFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAEL 158

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR +H +  K GF  ++ V  +++ LY+R  +     RVF DM   + V++ +L+SG
Sbjct: 159 FAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG 218

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +A+    +  LE+F  MQ  G+ P+  T S++L   A  G +    Q+H+ + K G    
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +  +L+ +Y+K   V  A  +F+  +  + + WN M+  +       ++FE F  M  
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG    + T+  +++ C  T+E+ L  Q+HS  +K G + D  +   L+  YSK G +E 
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++  M++E KDVVSWT+MI+G++Q+     A+  F +M + G+ P+    +  ++   
Sbjct: 399 ARRVLEMLKE-KDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457

Query: 394 AVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++      Q+HA I  + Y    S+  AL+N Y + G + EA   FE ++ KD +  + 
Sbjct: 458 GINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNG 517

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +++G+AQ G  E A+K++ ++   GVK N FTF S ++A +A  A ++QGKQ HA  IK 
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA-SANLAEIKQGKQIHARVIKT 576

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             +    V +AL+++Y K G+ E A   F    +R+ VSWN++I   +QHG   +AL++F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M+++ ++ + +TFIGV+ AC+H GLV+EG  YF  M +E+ I P  +HY+C++D++ R
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGR 696

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L++A   I  MP AA A VWRT+L+AC+              L+ L+PHDSA YVLL
Sbjct: 697 AGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLL 756

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN YA T  W  R +VRK+M DR V+KE G SWIEVKN  ++F  GD  HP + QIY+ L
Sbjct: 757 SNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
             ++ R+   GYK +  ++  D + E ++     HSE+LA+ FGL++ P   PL+++KNL
Sbjct: 817 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 876

Query: 796 RV 797
           RV
Sbjct: 877 RV 878



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 167/565 (29%), Positives = 290/565 (51%), Gaps = 8/565 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H + V  G  +   V   L+DLY +   V   RRVF++++  + VSW ++LSGYA+N 
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           + +  L L+ +M   G+ P  +  S+VL       + A    +H    K+G      V N
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           A+I++YL+    R A  VF  M  RD++T+N++++G+        A E F  M  +G   
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T  S++  CA+  +L+   QLHS + K GI  D+ +   L+  Y KCG +E A  IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           +   +  +VV W  M+    Q   +  +   FCQM   G+RPN FTY  IL         
Sbjct: 303 N-SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+H+  +KT +E    V   L++ Y K G L++A +V E++ EKD+V+W++M+AGY
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q    + A+  ++++   G+ P+    +S I+ C   + A+ QG Q HA    +  +  
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN-AMRQGLQIHARIYVSGYSGD 480

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + + +ALV +Y++ G I  A   F+    +D ++ N ++ G+AQ G  ++AL+VF  M +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             ++ +  TF+  ++A  +   + +G+Q    ++   H + T E  + ++ LY + G  E
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET-EVGNALISLYGKCGSFE 599

Query: 635 KAMDIINRMPFAASATVWRTVLAAC 659
            A    + M    +   W T++ +C
Sbjct: 600 DAKMEFSEMS-ERNEVSWNTIITSC 623



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 282/560 (50%), Gaps = 22/560 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P R+ V +N L+  + +    + AL +F  ++  GL     T+SS+L  C  L
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G Q+H    K+G + D  +  SL+DLY++  +VE    +F+  + +NVV W  +L
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLML 317

Query: 152 SGYARNKMND--RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
             +   ++ND  +  ELF +MQ  GI+PN FT+  +L        +    Q+H++ +K G
Sbjct: 318 VAFG--QINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG 375

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    V   LI MY K   +  AR V + ++++D ++W SM+AGYV +E   +A   F 
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFK 435

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G         S I  CA    +R   Q+H+++  +G   D +I   L+  Y++CG
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCG 495

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++ +A   F  M E+KD ++   ++SG  Q+G  + A+  F +M + GV+ N FT+   L
Sbjct: 496 RIREAFSSFEEM-ELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +A   ++      Q+HA +IKT +     VG AL++ Y K G  ++A   F  + E++ V
Sbjct: 555 SASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV 614

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+ ++   +Q G    A+ ++ Q+  EG+KPN+ TF  V+ AC+      E    F + 
Sbjct: 615 SWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSM 674

Query: 506 S----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
           S    I+ + ++  CV    + ++ + G ++ A +  +      D + W +++     H 
Sbjct: 675 SDEYGIRPRPDHYACV----IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH- 729

Query: 561 HTKKALEVFKEMRRQDLEFD 580
              K +EV +   +  LE +
Sbjct: 730 ---KNIEVGEFAAKHLLELE 746



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 164/339 (48%), Gaps = 23/339 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + + +   +++ V +  ++  Y +    ++AL  F  +++ G+      L+S +  C
Sbjct: 397 EKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGC 456

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G Q+H     SG++ DV++  +LV+LY R   + +    F++M   + ++  
Sbjct: 457 AGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGN 516

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            L+SG+A++ +++  L++F RM   G+K N FTF + L   A+   +    Q+H  VIK 
Sbjct: 517 GLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    T V NALIS+Y K     DA+  F  M +R+ ++WN+++     +   +EA + F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLF 636

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNIR---- 318
           + M   G +    TF+ V+  C+           H  +++ G+ +      ++ IR    
Sbjct: 637 DQMKKEGIKPNDVTFIGVLAACS-----------HVGLVEEGLSYFKSMSDEYGIRPRPD 685

Query: 319 --TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               ++  + + G+++ A K    M    D + W  ++S
Sbjct: 686 HYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 1/200 (0%)

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           LAG+    D    + ++     +        F+  + AC       +   + HA ++   
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L     V + L+ +YSK G +  A  VF+    RD VSW +M+ GYAQ+G  ++AL +++
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           +M R  +         V+++CT A L  +G +       +H     +   + ++ LY R 
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIFVGNAVITLYLRC 191

Query: 631 GMLEKAMDIINRMPFAASAT 650
           G    A  +   MP   + T
Sbjct: 192 GSFRLAERVFCDMPHRDTVT 211


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/689 (37%), Positives = 413/689 (59%), Gaps = 22/689 (3%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M +EG+K N  TF  VL  + D   +     +H+ V ++   +   V  AL++ Y K   
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           + DAR VFDGM  R   TWNSM++ Y  +E   EAF  F  M   G    R TF+S++  
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C   + L+  + +   + +   + D  + T L+  Y++C   E+A+++F  M++ K++++
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQ-KNLIT 179

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHII 405
           W+A+I+    +G    A+ +F  M +EG+ PN  T+  +L      S  +    +H  I 
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239

Query: 406 KTNYEKSFSVGTALLNAY--VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           +   + + ++  AL+N Y   + G LD A  + + +DE+ I AW+ ++ GY   G +  A
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           ++ Y++L  E +  ++ TF SV+NACT+ S ++ +GK  H+ +++  L++ + V +AL  
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTS-STSLAEGKMIHSNAVECGLDSDVIVKNALTN 358

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MYSK G++E+A  +F     R  VSWN M+  YAQHG +++ L++ ++M ++ ++ +GIT
Sbjct: 359 MYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGIT 418

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           F+ V+++C+HAGL+ EG QYF  + ++  I    EHY C+VDL  RAG L++A   I++M
Sbjct: 419 FVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKM 478

Query: 644 PFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERA 689
           P       W ++L ACR              L+ L P +S+  V+LSN+Y+  G W+  A
Sbjct: 479 PSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAA 538

Query: 690 RVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
           ++R+ M  R+VKK  G S I+VKNK + F   D SHP++ +IY K+EEL   +++AGY P
Sbjct: 539 KLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVP 598

Query: 750 DTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLIS 809
           DT  VL D+D+E KE++L+ HSE+LAIAFGL++TP  + L I KNLRVC DCHT  K IS
Sbjct: 599 DTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFIS 658

Query: 810 KLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           K+  R+IVVRD +RFHHF++G CSC DYW
Sbjct: 659 KITGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 246/495 (49%), Gaps = 20/495 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +H    +S  + DV V+T+LV+ Y +  ++ D R+VFD M   +V +W S++S Y+ 
Sbjct: 29  GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 88

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           ++ +     +F RMQ EG + +  TF ++L    +   +     V   + +   E+   V
Sbjct: 89  SERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFV 148

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             ALI+MY + +   +A  VF  M+ ++ ITW++++  +  +    EA   F  M   G 
Sbjct: 149 GTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 208

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC--GKMEDA 334
              R TF+S++    T   L    ++H  + ++G+D    +   L+  Y +C  G+++ A
Sbjct: 209 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVA 268

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             I   M E + + +W  +I+G+  +G    A+  + ++  E +  +  T+  +L A  +
Sbjct: 269 EVILQEMDE-QQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTS 327

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
            +       +H++ ++   +    V  AL N Y K G ++ A ++F+ +  +  V+W+ M
Sbjct: 328 STSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGM 387

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC----S 506
           L  YAQ G++E  +K+ R++  EGVK N  TF SV+++C+      E  + FH+      
Sbjct: 388 LQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRG 447

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           I+ K  +  C    LV +  + G ++ A + + K   + ++V+W S++     H    K 
Sbjct: 448 IEVKTEHYGC----LVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVH----KD 499

Query: 566 LEVFKEMRRQDLEFD 580
           L+  K   R+ LE D
Sbjct: 500 LDRGKLAARKLLELD 514



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 2/217 (0%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           ++    +N L+  Y      +EAL  +  ++   +P+   T  SVL  C        G+ 
Sbjct: 277 EQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKM 336

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H   V+ G   DV V  +L ++Y +  ++E+ RR+FD M   + VSW  +L  YA++  
Sbjct: 337 IHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGE 396

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGGEVVTSVCN 218
           ++ VL+L  +M+ EG+K N  TF +VL   +  G++A   Q  H++    G EV T    
Sbjct: 397 SEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYG 456

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSI-TWNSMVAG 254
            L+ +  ++  +++A      M     I TW S++  
Sbjct: 457 CLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGA 493


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 276/759 (36%), Positives = 441/759 (58%), Gaps = 21/759 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQ+     K+G  ++    T LV L+ R  +V++  RVF+ ++    V + ++L G+A+ 
Sbjct: 54  RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              D+ L+ F RM+ + ++P  + F+ +L V  DE  +    ++H +++K+G  +     
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
             L +MY K + V +AR VFD M +RD ++WN++VAGY  N +   A E   +M     +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            +  T VSV+   +  + + + +++H   +++G D   NI T L+  Y+KCG +E A ++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M E ++VVSW +MI  ++QN     A+  F +M  EGV+P   +    L A   +  
Sbjct: 294 FDGMLE-RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            +    +H   ++   +++ SV  +L++ Y K   +D AA +F  +  + +V+W+AM+ G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +AQ G    A+  + Q+ S  VKP+ FT+ SVI A  A  +     K  H   +++ L+ 
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA-IAELSITHHAKWIHGVVMRSCLDK 471

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V++ALV MY+K G I  A  +F    +R + +WN+MI GY  HG  K ALE+F+EM+
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           +  ++ +G+TF+ VI+AC+H+GLV+ G + F +M   + I  +M+HY  MVDL  RAG L
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
            +A D I +MP   +  V+  +L AC              RL  L P D   +VLL+N+Y
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
            A   W++  +VR  M  + ++K  G S +E+KN+ +SF +G  +HP S +IY+ LE+L 
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLI 711

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             +K+AGY PDT+ VL  ++++ KE +LS HSE+LAI+FGL+ T AG  + + KNLRVC 
Sbjct: 712 CHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCA 770

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH   K IS +  R+IVVRD  RFHHFK G CSCGDYW
Sbjct: 771 DCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 279/523 (53%), Gaps = 13/523 (2%)

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
           V Y+ +L  + + S   +AL  F+ +R   +       + +LK CG   +   G+++H  
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
            VKSGF+ D+   T L ++Y +   V + R+VFD M E ++VSW ++++GY++N M    
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           LE+   M  E +KP+  T  +VL  ++   +++   ++H   +++G + + ++  AL+ M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K   +  AR +FDGM +R+ ++WNSM+  YV NE   EA   F  M   G + T  + 
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           +  +  CA   +L   R +H   ++ G+D + ++   L+  Y KC +++ A+ +F  ++ 
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---- 399
            + +VSW AMI G  QNG    A+N+F QM    V+P+ FTY  ++TA   +S       
Sbjct: 401 -RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           +H  ++++  +K+  V TAL++ Y K G +  A  +F+++ E+ +  W+AM+ GY   G 
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS- 518
            + A++++ ++    +KPN  TF SVI+AC+  S  VE G +   C    K N ++ +S 
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSH-SGLVEAGLK---CFYMMKENYSIELSM 575

Query: 519 ---SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
               A+V +  + G +  A +   +   +  V+    + G  Q
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 223/435 (51%), Gaps = 14/435 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR P+R+ V +N ++  Y ++ + + AL +   +    L     T+ SVL     L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+++H   ++SGF   VN+ST+LVD+Y +  ++E  R++FD M E NVVSW S++
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             Y +N+     + +F +M  EG+KP   +    L   AD G +     +H + ++ G +
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              SV N+LISMY K K V  A ++F  ++ R  ++WN+M+ G+  N   ++A   F+ M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                +    T+VSVI   A       A+ +H  V+++ +D +  + T L+  Y+KCG +
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A  IF MM E + V +W AMI G+  +G    A+  F +M +  ++PNG T+  +++A
Sbjct: 490 MIARLIFDMMSE-RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548

Query: 392 -------QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDEK 442
                  +  +  F    +++K NY    S+    A+++   + G L+EA      +  K
Sbjct: 549 CSHSGLVEAGLKCF----YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK 604

Query: 443 DIVAWSAMLAGYAQI 457
             V     + G  QI
Sbjct: 605 PAVNVYGAMLGACQI 619



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 188/321 (58%), Gaps = 11/321 (3%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           +++ C++ KELR   Q+   V KNG+  +H  +T L+  + + G +++A+++F  +    
Sbjct: 43  LLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT-----AQPAVSPFQV 400
           +V+  T M+ G  +   +D A+ FF +M  + V P  + ++ +L      A+  V   ++
Sbjct: 100 NVLYHT-MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK-EI 157

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  ++K+ +       T L N Y K   ++EA KVF+ + E+D+V+W+ ++AGY+Q G  
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A+++ + +  E +KP+  T  SV+ A +A    +  GK+ H  ++++  ++ + +S+A
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALR-LISVGKEIHGYAMRSGFDSLVNISTA 276

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LV MY+K G++E+A ++F    +R++VSWNSMI  Y Q+ + K+A+ +F++M  + ++  
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336

Query: 581 GITFIGVITACTHAGLVDEGQ 601
            ++ +G + AC   G ++ G+
Sbjct: 337 DVSVMGALHACADLGDLERGR 357


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 271/704 (38%), Positives = 412/704 (58%), Gaps = 84/704 (11%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+L+SMY KS  + DAR VF  M +RD+++W  MV G        +A +TF +M   G  
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            ++    +V+  CA T+   + R++HS V+K G+     +   ++  Y KCG  E A  +
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220

Query: 338 FSMMR------------------------------EMKDVVSWTAMISGHLQNGAIDLAV 367
           F  M+                              E + +VSW A+I+G+ QNG  D+A+
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMAL 280

Query: 368 NFFCQM-TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT--------------N 408
            FF +M T   + P+ FT + +L+A   +       Q+H++I++T               
Sbjct: 281 KFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALIST 340

Query: 409 YEKSFSVGTA-------------------LLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           Y KS SV TA                   LL  YVK G   +A +VF++++ +D++AW+A
Sbjct: 341 YAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTA 400

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GY Q G  + A++++R +   G +PN  T ++V++AC A  A +  GKQ H  +I++
Sbjct: 401 MIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSAC-ASLAYLGYGKQIHCRAIRS 459

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEV 568
               ++ VS+A++T+Y++ G++  A  VF +   +++ V+W SMI   AQHG  ++A+ +
Sbjct: 460 LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVL 519

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM R  ++ D +T+IGV +ACTHAG +D+G++Y++ M+NEH I P M HY+CMVDL +
Sbjct: 520 FEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLA 579

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG+L +A + I RMP A    VW ++LAACR              L+S+ P +S  Y  
Sbjct: 580 RAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSA 639

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+N+Y+A G W + AR+ KL  D+ VKKE G+SW  V++K + F A D+ HPQ + I  K
Sbjct: 640 LANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKK 699

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
             E+   +K AG+ PD + VL D+DDE KE +LS+HSE+LAIAFGL++TP    L+I+KN
Sbjct: 700 AAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKN 759

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCHT IK ISK+  R+I+VRD  RFHHF++G CSC DYW
Sbjct: 760 LRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 243/518 (46%), Gaps = 80/518 (15%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+     SL+ +Y ++  + D R VF  M E + VSWT ++ G  R       ++ F  M
Sbjct: 95  RNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             EG+ P+ F  + VL   A         +VH+ VIK G      V N+++ MY K    
Sbjct: 155 VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDA 214

Query: 231 RDARAV-------------------------------FDGMEDRDSITWNSMVAGYVTNE 259
             ARAV                               F+ ME+R  ++WN+++AGY  N 
Sbjct: 215 ETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNG 274

Query: 260 LHMEAFETFNNMGLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           L   A + F+ M  A + E    T  SV+  CA  + L++ +Q+HS +L+ G+ +   I 
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334

Query: 319 TGLMVAYSKCGKMEDASKI-------------FSMM-------------REM------KD 346
             L+  Y+K G +E A +I             F+ +             RE+      +D
Sbjct: 335 NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRD 394

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHA 402
           V++WTAMI G+ QNG  D A+  F  M R G  PN  T + +L+A  +++      Q+H 
Sbjct: 395 VIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHC 454

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
             I++  E+S SV  A++  Y + G +  A +VF+ I   K+ V W++M+   AQ G  E
Sbjct: 455 RAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGE 514

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALC 516
            A+ ++ ++   GVKP+  T+  V +ACT  +  +++GK+++        I  ++++  C
Sbjct: 515 QAIVLFEEMLRVGVKPDRVTYIGVFSACT-HAGFIDKGKRYYEQMLNEHGIVPEMSHYAC 573

Query: 517 VSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
               +V + ++ G +  A E  +R     D V W S++
Sbjct: 574 ----MVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLL 607



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 223/498 (44%), Gaps = 85/498 (17%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F + P+R+ V +  ++    R     +A+  FL +   GL      L++VL +C     
Sbjct: 119 VFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEA 178

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD---------------- 137
              GR+VH   +K G +  V V+ S++ +Y +  + E  R VF+                
Sbjct: 179 RGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSL 238

Query: 138 ---------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFT 181
                          +M E ++VSW ++++GY +N ++D  L+ F RM     ++P+ FT
Sbjct: 239 YTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFT 298

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV----------- 230
            ++VL   A+  ++    Q+H+ +++ G    + + NALIS Y KS  V           
Sbjct: 299 VTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAV 358

Query: 231 ----------------------RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                                 + AR VFD M +RD I W +M+ GY  N  + EA E F
Sbjct: 359 VADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELF 418

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +M  +G E    T  +V+  CA+   L   +Q+H + +++  +   ++   ++  Y++ 
Sbjct: 419 RSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARS 478

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  A ++F  +   K+ V+WT+MI    Q+G  + A+  F +M R GV+P+  TY  +
Sbjct: 479 GSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGV 538

Query: 389 LTAQPAVSPFQVHAHII---KTNYEK---------SFSVGTALLNAYVKKGILDEAAKVF 436
            +A         HA  I   K  YE+           S    +++   + G+L EA +  
Sbjct: 539 FSA-------CTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFI 591

Query: 437 ELID-EKDIVAWSAMLAG 453
           + +    D V W ++LA 
Sbjct: 592 QRMPVAPDTVVWGSLLAA 609



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 168/372 (45%), Gaps = 40/372 (10%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTCG 89
           S+F+   +R+ V +N ++  Y ++ L   AL  F   L    +    F  T++SVL  C 
Sbjct: 250 SMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEF--TVTSVLSACA 307

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR--------------- 134
            L     G+Q+H   +++G      +  +L+  Y ++ +VE  RR               
Sbjct: 308 NLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISF 367

Query: 135 ------------------VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
                             VFD MN  +V++WT+++ GY +N  ND  +ELF  M   G +
Sbjct: 368 TALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPE 427

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           PNS T + VL   A    +    Q+H   I++  E   SV NA+I++Y +S  V  AR V
Sbjct: 428 PNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRV 487

Query: 237 FDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           FD +  R +++TW SM+     + L  +A   F  M   G +  R T++ V   C     
Sbjct: 488 FDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGF 547

Query: 296 LRLARQLHSQVL-KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +   ++ + Q+L ++GI  + +    ++   ++ G + +A +    M    D V W +++
Sbjct: 548 IDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLL 607

Query: 355 SGHLQNGAIDLA 366
           +        DLA
Sbjct: 608 AACRVRKNADLA 619



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 151/339 (44%), Gaps = 46/339 (13%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           +K+ + +FD    R+ + +  ++  Y ++  + EA+ LF  + R G      TL++VL  
Sbjct: 380 TKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSA 439

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVS 146
           C  L    +G+Q+HC  ++S   + V+VS +++ +Y R+ +V   RRVFD +      V+
Sbjct: 440 CASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT 499

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WTS++   A++ + ++ + LF  M   G+KP+  T+  V       G +    + +  ++
Sbjct: 500 WTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQML 559

Query: 207 KNGG---EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHM 262
              G   E+    C  ++ +  ++ ++ +A      M    D++ W S++A         
Sbjct: 560 NEHGIVPEMSHYAC--MVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA-------- 609

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGL 321
                                      C   K   LA     ++L   ID D++   + L
Sbjct: 610 ---------------------------CRVRKNADLAELAAEKLLS--IDPDNSGAYSAL 640

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
              YS CG+  DA++I+  +R+ K V   T     H+Q+
Sbjct: 641 ANVYSACGRWNDAARIWK-LRKDKAVKKETGFSWTHVQS 678


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/752 (36%), Positives = 425/752 (56%), Gaps = 21/752 (2%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +K+G   +    T LV L+ +  ++ +  RVF  + +     + ++L GYARN   D  +
Sbjct: 101 IKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAV 160

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
             F RM+ +G++P  + F+ +L V  D   +    ++H  +I NG          +++MY
Sbjct: 161 SFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMY 220

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
            K ++V +A  +FD M +RD + WN++++GY  N     A E    M   G      T V
Sbjct: 221 AKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIV 280

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           S++   A    LR+ R +H   ++ G +   N+ T L+  YSKCG +  A  IF  M   
Sbjct: 281 SILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTG- 339

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----V 400
           K VVSW +MI G++QNG    A+  F +M  E V     T    L A   +   +    V
Sbjct: 340 KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFV 399

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  + +       SV  +L++ Y K   +D AA++FE +  K +V+W+AM+ GYAQ G  
Sbjct: 400 HKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRI 459

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A+  + ++  + +KP+ FT  SVI A  A  + + Q K  H   I+  L+  + V++A
Sbjct: 460 NEAIDYFCKMQLQNIKPDSFTMVSVIPA-LAELSVLPQAKWIHGLVIRTCLDKNVFVATA 518

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LV MY+K G + +A ++F    +R + +WN+MI GY  HG  K ALE+F++M+++ ++ +
Sbjct: 519 LVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPN 578

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            +TF+ V++AC+H+GLV+EG QYF  M  ++ + P M+HY  MVDL  RA  L +A D I
Sbjct: 579 EVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFI 638

Query: 641 NRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQ 686
            +MP   + +V+  +L AC              R+  L P D   +VLL+N+YA    W 
Sbjct: 639 QKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWD 698

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + ARVR  M  + ++K  G+S +E++N+ ++F +G  SHPQ+ +IY+ LE L  R+K AG
Sbjct: 699 KVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAG 758

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PDT+ V  D++D  KE +L+ HSE+LAIAF L+ T  G  + + KNLRVCGDCH   K
Sbjct: 759 YMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATK 817

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IS + +R+I+VRD  RFHHFK+G CSCGDYW
Sbjct: 818 YISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 154/461 (33%), Positives = 262/461 (56%), Gaps = 6/461 (1%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           Y+ +L  Y R+S   +A++ F  +R  G+       + +LK CG   D   G+++HC+ +
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLI 202

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
            +GFA +V   T +V++Y +   VE+  ++FD M E ++V W +++SGYA+N      LE
Sbjct: 203 VNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALE 262

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L  RMQ EG +P+S T  ++L  +AD G +     +H   ++ G E   +V  AL+ MY 
Sbjct: 263 LVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYS 322

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   V  AR +FD M  +  ++WNSM+ GYV N     A E F  M     E+T  T + 
Sbjct: 323 KCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMG 382

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
            +  CA   ++   R +H  + +  +  D ++   L+  YSKC +++ A++IF  ++  K
Sbjct: 383 ALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQH-K 441

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VH 401
            +VSW AMI G+ QNG I+ A+++FC+M  + ++P+ FT   ++ A   +S       +H
Sbjct: 442 TLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIH 501

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
             +I+T  +K+  V TAL++ Y K G +  A K+F+++DE+ +  W+AM+ GY   G  +
Sbjct: 502 GLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGK 561

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            A++++ ++  E +KPNE TF  V++AC+  S  VE+G Q+
Sbjct: 562 AALELFEKMKKEVIKPNEVTFLCVLSACSH-SGLVEEGFQY 601



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 192/360 (53%), Gaps = 5/360 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR P+R+ V +N ++  Y ++   + AL L L ++  G      T+ S+L     +  
Sbjct: 232 MFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGS 291

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR +H   +++GF   VNVST+LVD+Y +  +V   R +FD M    VVSW S++ G
Sbjct: 292 LRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDG 351

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV--IKNGGE 211
           Y +N      +E+F +M  E ++  + T    L   AD G V     VH ++  ++ G +
Sbjct: 352 YVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSD 411

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           V  SV N+LISMY K K V  A  +F+ ++ +  ++WN+M+ GY  N    EA + F  M
Sbjct: 412 V--SVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKM 469

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L   +    T VSVI   A    L  A+ +H  V++  +D +  + T L+  Y+KCG +
Sbjct: 470 QLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAV 529

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A K+F MM E + V +W AMI G+  +G    A+  F +M +E ++PN  T+  +L+A
Sbjct: 530 HTARKLFDMMDE-RHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSA 588



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 208/362 (57%), Gaps = 10/362 (2%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           +++LC + KEL    Q    ++KNG+  +H  +T L+  + K G + +A+++F  + +  
Sbjct: 83  LLELCTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKI 139

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVH 401
           D +  T M+ G+ +N ++D AV+FFC+M  +GVRP  + ++ +L      +      ++H
Sbjct: 140 DELYHT-MLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIH 198

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
             +I   +  +    T ++N Y K  +++EA K+F+ + E+D+V W+ +++GYAQ G  +
Sbjct: 199 CQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGK 258

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+++  ++  EG +P+  T  S++ A  A   ++  G+  H  S++A   + + VS+AL
Sbjct: 259 TALELVLRMQEEGKRPDSITIVSILPA-VADVGSLRIGRSIHGYSMRAGFESFVNVSTAL 317

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           V MYSK G++ +A  +F R   + +VSWNSMI GY Q+G    A+E+F++M  + +E   
Sbjct: 318 VDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTN 377

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +T +G + AC   G V++G ++   ++++  +   +   + ++ +YS+   ++ A +I  
Sbjct: 378 VTVMGALHACADLGDVEQG-RFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFE 436

Query: 642 RM 643
            +
Sbjct: 437 NL 438



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 148/302 (49%), Gaps = 13/302 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR   +  V +N ++  Y ++     A+ +F  +    + +   T+   L  C  L D
Sbjct: 333 IFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGD 392

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR VH    +     DV+V  SL+ +Y +   V+    +F+++    +VSW +++ G
Sbjct: 393 VEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILG 452

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+N   +  ++ F +MQ++ IKP+SFT  +V+  LA+  ++  A  +H +VI+   +  
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKN 512

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL+ MY K   V  AR +FD M++R   TWN+M+ GY T+ L   A E F  M  
Sbjct: 513 VFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKK 572

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT--GLMVAYSKCGKM 331
              +    TF+ V+  C+           HS +++ G  +  +++   GL  A    G M
Sbjct: 573 EVIKPNEVTFLCVLSACS-----------HSGLVEEGFQYFGSMKKDYGLEPAMDHYGAM 621

Query: 332 ED 333
            D
Sbjct: 622 VD 623



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 79/164 (48%), Gaps = 14/164 (8%)

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           QF    IK  L +     + LV+++ K G++  A+ VF+    +    +++M+ GYA++ 
Sbjct: 95  QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNS 154

Query: 561 HTKKALEVFKEMRRQDLEFDGI-----TFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIY 614
               A+  F  MR     +DG+      F  ++  C     + +G++ +  ++VN     
Sbjct: 155 SLDDAVSFFCRMR-----YDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNG--FA 207

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
             +   + +V++Y++  ++E+A  + +RMP       W T+++ 
Sbjct: 208 SNVFAMTGVVNMYAKCRLVEEAYKMFDRMP-ERDLVCWNTIISG 250


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/826 (33%), Positives = 456/826 (55%), Gaps = 24/826 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD   +R    +N ++  +     + EA+ L+  +R LG+ +   T  SVLK CG L +
Sbjct: 101 VFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGE 160

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD--MNESNVVSWTSLL 151
              G ++H   VK GF   V V  +L+ +Y +  ++   R +FD   M + + VSW S++
Sbjct: 161 SRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSII 220

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S +         L LF RMQ  G+  N++TF   L  + D   V   + +H   +K+   
Sbjct: 221 SAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHF 280

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NALI+MY K   + DA  VF  M  RD ++WN++++G V NEL+ +A   F +M
Sbjct: 281 ADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDM 340

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +  +  + + +++I     +  L   +++H+  ++NG+D +  I   L+  Y+KC  +
Sbjct: 341 QNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCV 400

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +     F  M E KD++SWT +I+G+ QN     A+N F ++  +G+  +      +L A
Sbjct: 401 KHMGYAFECMHE-KDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRA 459

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       ++H ++ K +      +  A++N Y + G  D A + FE I  KDIV+W
Sbjct: 460 CSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSW 518

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++M+      G    A++++  L    ++P+     S ++A TA  +++++GK+ H   I
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSA-TANLSSLKKGKEIHGFLI 577

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +        ++S+LV MY+  G +E++ ++F   ++RDL+ W SMI     HG   +A+ 
Sbjct: 578 RKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIA 637

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +FK+M  +++  D ITF+ ++ AC+H+GL+ EG+++F+IM   + + P  EHY+CMVDL 
Sbjct: 638 LFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLL 697

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
           SR+  LE+A   +  MP   S+ VW  +L AC               L+     +S  Y 
Sbjct: 698 SRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYA 757

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           L+SN++AA G W +   VR  M    +KK  G SWIEV NK ++F+A D SHPQ++ IY 
Sbjct: 758 LISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYL 817

Query: 734 KLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           KL + +  L K  GY   T +V  ++ +E K  +L +HSERLA+ +GL+ TP G  ++I 
Sbjct: 818 KLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRIT 877

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+C DCHT  K+ S++ +R +VVRD NRFHHF+ GLCSCGD+W
Sbjct: 878 KNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 283/546 (51%), Gaps = 12/546 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H   +KS  +    ++T L+ +Y +  +++D  +VFD+M E  + +W +++  +  
Sbjct: 65  GQQLHARLLKSHLS--AFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVS 122

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +      +EL+  M+V G+  ++ TF +VL      G      ++H + +K G      V
Sbjct: 123 SGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFV 182

Query: 217 CNALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           CNALI+MY K   +  AR +FDG  ME  D+++WNS+++ +VT    +EA   F  M   
Sbjct: 183 CNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEV 242

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G      TFV+ ++       ++L   +H   LK+    D  +   L+  Y+KCG+MEDA
Sbjct: 243 GVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDA 302

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP- 393
            ++F+ M   +D VSW  ++SG +QN     A+N+F  M     +P+  +   ++ A   
Sbjct: 303 ERVFASML-CRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGR 361

Query: 394 ---AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
               ++  +VHA+ I+   + +  +G  L++ Y K   +      FE + EKD+++W+ +
Sbjct: 362 SGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTI 421

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +AGYAQ      A+ ++R++  +G+  +     SV+ AC+   +     ++ H    K  
Sbjct: 422 IAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR-NFIREIHGYVFKRD 480

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L + + + +A+V +Y + G+ + A   F+  R +D+VSW SMI     +G   +ALE+F 
Sbjct: 481 LADIM-LQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFY 539

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            +++ +++ D I  I  ++A  +   + +G++    ++ +   +      S +VD+Y+  
Sbjct: 540 SLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACC 598

Query: 631 GMLEKA 636
           G +E +
Sbjct: 599 GTVENS 604



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 182/350 (52%), Gaps = 11/350 (3%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++ LC   K L   +QLH+++LK+       + T L+  Y KCG ++DA K+F  M E +
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTE-R 108

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVH 401
            + +W AM+   + +G    A+  + +M   GV  +  T+  +L A  A+       ++H
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE--LIDEKDIVAWSAMLAGYAQIGD 459
              +K  + +   V  AL+  Y K G L  A  +F+  +++++D V+W+++++ +   G 
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGK 228

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
              A+ ++R++   GV  N +TF + +     PS  V+ G   H  ++K+     + V++
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS-FVKLGMGIHGAALKSNHFADVYVAN 287

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           AL+ MY+K G +E A  VF     RD VSWN+++ G  Q+   + AL  F++M+    + 
Sbjct: 288 ALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKP 347

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           D ++ + +I A   +G +  G++     +  + +   M+  + ++D+Y++
Sbjct: 348 DQVSVLNLIAASGRSGNLLNGKEVHAYAI-RNGLDSNMQIGNTLIDMYAK 396


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 280/816 (34%), Positives = 457/816 (56%), Gaps = 63/816 (7%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T  +VL +C    D V GR +H     S F RD  V  +L+ +Y + +++ D R VF+ M
Sbjct: 9   TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68

Query: 140 N--ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
           +  + NVVSW ++++ YA+N  +   L L+ RM ++G+  +  TF +VLG  +    +A 
Sbjct: 69  DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS---LAQ 125

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             ++H  V  +G +   S+ NAL++MY +   V DA+ +F  ++ RD  +WN+++  +  
Sbjct: 126 GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQ 185

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +     A   F  M     +   +T+++VI   +T + L   R++H++++ NG D D  +
Sbjct: 186 SGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVV 244

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            T L+  Y KCG   +A ++F  M++ +D+VSW  MI  ++ NG    A+  + ++  EG
Sbjct: 245 ATALINMYGKCGSSHEAREVFDKMKK-RDMVSWNVMIGCYVLNGDFHEALELYQKLDMEG 303

Query: 378 VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            +    T+  IL A  +V        VH+HI++   +   +V TAL+N Y K G L+EA 
Sbjct: 304 FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEAR 363

Query: 434 KVFELIDEKDIVAWS----------------------------------AMLAGYAQIGD 459
           KVF  +  +D VAWS                                  AM+  Y Q G 
Sbjct: 364 KVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGC 423

Query: 460 TEGAVKIYRQLT-SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
              A+KI+R++T + G+KP+  TF +V+ AC A    + + K  HA   +++L + + V+
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEAC-ASLGRLSEVKALHAQISESELESNVVVT 482

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           + L+ MY++ G++E A  +F   +++ +VSW +M+  ++Q+G   +AL++F+EM  + ++
Sbjct: 483 NTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D +T+  ++  CTH G +++G +YF  M   H + PT +H++ MVDL  R+G L  A +
Sbjct: 543 PDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKE 602

Query: 639 IINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGH 684
           ++  MPF      W T L ACR+                L P  +A Y+ +SN+YAA G 
Sbjct: 603 LLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGM 662

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W++ A VRK M +R +KK  G S+IEV  K + F +G   HP++++I  +L  L   ++ 
Sbjct: 663 WEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRA 722

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT-PAGAPLQIVKNLRVCGDCHT 803
           AGY PDT  VL D+ +  KE +L  HSE++AIAFGLV++  +G P+++VKNLRVC DCHT
Sbjct: 723 AGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHT 782

Query: 804 VIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
             K I+++  RDI+VRD NRFH F  +G CSCGDYW
Sbjct: 783 ATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 291/564 (51%), Gaps = 51/564 (9%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           QRN V +N ++  Y ++    EAL L+  +   GL     T  SVL  C  L     GR+
Sbjct: 72  QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GRE 128

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H     SG     +++ +LV +Y R  +V D +R+F  +   +  SW +++  ++++  
Sbjct: 129 IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGD 188

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
               L +F  M+ + +KPNS T+  V+   +   ++    ++H  ++ NG +    V  A
Sbjct: 189 WSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATA 247

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI+MY K     +AR VFD M+ RD ++WN M+  YV N    EA E +  + + G + T
Sbjct: 248 LINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRT 307

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           ++TFVS++  C++ K L   R +HS +L+ G+D +  + T L+  Y+KCG +E+A K+F+
Sbjct: 308 KATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFN 367

Query: 340 MMREM---------------------------------KDVVSWTAMISGHLQNGAIDLA 366
            M+                                   +D +SW AMI+ ++QNG    A
Sbjct: 368 AMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAA 427

Query: 367 VNFFCQMT-REGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLN 421
           +  F +MT   G++P+  T+  +L A  ++        +HA I ++  E +  V   L+N
Sbjct: 428 MKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLIN 487

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            Y + G L+EA ++F    EK +V+W+AM+A ++Q G    A+ +++++  EGVKP++ T
Sbjct: 488 MYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVT 547

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS----SALVTMYSKKGNIESASEV 537
           ++S++  CT    ++EQG ++   +  A+L +AL  +    +A+V +  + G +  A E+
Sbjct: 548 YTSILFVCT-HGGSLEQGWRYF--TDMAEL-HALAPTADHFAAMVDLLGRSGRLFDAKEL 603

Query: 538 FKRQR-KRDLVSWNSMICGYAQHG 560
            +    + D V+W + +     HG
Sbjct: 604 LESMPFEPDPVAWMTFLTACRIHG 627



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 158/502 (31%), Positives = 269/502 (53%), Gaps = 48/502 (9%)

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           +P++ TF TVL   +  G V     +H  +  +  E  T V NALISMY K   + DAR+
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 236 VFDGME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           VF+ M+   R+ ++WN+M+A Y  N    EA   +  M L G      TFVSV+  C++ 
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L   R++H++V  +G+D   ++   L+  Y++ G + DA ++F  + + +D  SW A+
Sbjct: 123 --LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL-QTRDETSWNAV 179

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT--AQPAVSP--FQVHAHIIKTNY 409
           I  H Q+G    A+  F +M  + V+PN  TY  +++  + P V P   ++HA I+   +
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +    V TAL+N Y K G   EA +VF+ + ++D+V+W+ M+  Y   GD   A+++Y++
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           L  EG K  + TF S++ AC++   A+ QG+  H+  ++  L++ + V++ALV MY+K G
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVK-ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 530 NIESASEVF---------------------------KRQRK-------RDLVSWNSMICG 555
           ++E A +VF                           ++ RK       RD +SWN+MI  
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITT 417

Query: 556 YAQHGHTKKALEVFKEMR-RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           Y Q+G    A+++F+EM     L+ D +TFI V+ AC   G + E  +     ++E  + 
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQISESELE 476

Query: 615 PTMEHYSCMVDLYSRAGMLEKA 636
             +   + ++++Y+R G LE+A
Sbjct: 477 SNVVVTNTLINMYARCGSLEEA 498



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 171/375 (45%), Gaps = 36/375 (9%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S + + +FD+  +R+ V +N ++  Y  +    EAL L+  +   G     +T  S+L  
Sbjct: 258 SHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGA 317

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  +     GR VH   ++ G   +V V+T+LV++Y +  ++E+ R+VF+ M   + V+W
Sbjct: 318 CSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAW 377

Query: 148 TSLLSGYARN----------KMNDRV------------------------LELFHRMQ-V 172
           ++L+  YA N          K+ DR+                        +++F  M   
Sbjct: 378 STLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGA 437

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G+KP++ TF  VL   A  G ++    +H  + ++  E    V N LI+MY +   + +
Sbjct: 438 AGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEE 497

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  +F   +++  ++W +MVA +     + EA + F  M L G +    T+ S++ +C  
Sbjct: 498 AERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTH 557

Query: 293 TKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
              L    +  + + + + +    +    ++    + G++ DA ++   M    D V+W 
Sbjct: 558 GGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWM 617

Query: 352 AMISGHLQNGAIDLA 366
             ++    +G ++L 
Sbjct: 618 TFLTACRIHGKLELG 632


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/760 (36%), Positives = 425/760 (55%), Gaps = 21/760 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++H   +K+    D +V   L  LY+  N V   RR+FD++   +V+ W  ++  YA N
Sbjct: 28  KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN 87

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              D  ++L+H M   G++PN +T+  VL   +    +   V++H+     G E    VC
Sbjct: 88  GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVC 147

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            AL+  Y K  ++ +A+ +F  M  RD + WN+M+AG     L  +A +    M   G  
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
              ST V V+      K L   + LH   ++   D    + TGL+  Y+KC  +  A KI
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT-REGVRPNGFTYSIILTAQPAVS 396
           F +M  +++ VSW+AMI G++ +  +  A+  F QM  ++ + P   T   +L A   ++
Sbjct: 268 FDVM-GVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 ++H +IIK        +G  LL+ Y K G++D+A + F+ ++ KD V++SA+++
Sbjct: 327 DLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVS 386

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G  Q G+   A+ I+R +   G+ P+  T   V+ AC+   AA++ G   H   I     
Sbjct: 387 GCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH-LAALQHGFCSHGYLIVRGFA 445

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               + +AL+ MYSK G I  A EVF R  + D+VSWN+MI GY  HG   +AL +F ++
Sbjct: 446 TDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDL 505

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
               L+ D ITFI ++++C+H+GLV EG+ +FD M  +  I P MEH  CMVD+  RAG+
Sbjct: 506 LALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGL 565

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNM 678
           +++A   I  MPF     +W  +L+ACR+               SL P  +  +VLLSN+
Sbjct: 566 IDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNI 625

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           Y+A G W + A +R    D  +KK  G SWIE+    ++F+ GD SH Q +QI  KLEEL
Sbjct: 626 YSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 685

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
              +K  GY+ + S+V QD+++E KE IL  HSE+LAIAFG++   AG P+ + KNLRVC
Sbjct: 686 LVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVC 745

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCHT IK ++ + +R+I VRD NRFHHFK G C+CGD+W
Sbjct: 746 GDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 282/560 (50%), Gaps = 15/560 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P  + + +N+++  Y  +     A++L+  +  LG+     T   VLK C  L
Sbjct: 63  RRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGL 122

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G ++H      G   DV V T+LVD Y +   + + +R+F  M+  +VV+W +++
Sbjct: 123 LAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI 182

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G +   + D  ++L  +MQ EGI PNS T   VL  + +   +     +H   ++   +
Sbjct: 183 AGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD 242

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V   L+ MY K + +  AR +FD M  R+ ++W++M+ GYV ++   EA E F+ M
Sbjct: 243 NGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQM 302

Query: 272 GLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
            L  A + T  T  SV++ CA   +L   R+LH  ++K G   D  +   L+  Y+KCG 
Sbjct: 303 ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGV 362

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA + F  M   KD VS++A++SG +QNG   +A++ F  M   G+ P+  T   +L 
Sbjct: 363 IDDAIRFFDEMNP-KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLP 421

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   ++  Q     H ++I   +     +  AL++ Y K G +  A +VF  +D  DIV+
Sbjct: 422 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS 481

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC- 505
           W+AM+ GY   G    A+ ++  L + G+KP++ TF  ++++C+     +E    F A  
Sbjct: 482 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMS 541

Query: 506 ---SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
              SI  ++ + +C    +V +  + G I+ A    +    + D+  W++++     H +
Sbjct: 542 RDFSIVPRMEHCIC----MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 597

Query: 562 TKKALEVFKEMRRQDLEFDG 581
            +   EV K+++    E  G
Sbjct: 598 IELGEEVSKKIQSLGPESTG 617



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 230/454 (50%), Gaps = 14/454 (3%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           A ++H   +KN     +SV + L  +YL    V  AR +FD + +   I WN ++  Y  
Sbjct: 27  AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAW 86

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           N     A + +++M   G    + T+  V+K C+    +    ++HS     G++ D  +
Sbjct: 87  NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            T L+  Y+KCG + +A ++FS M   +DVV+W AMI+G    G  D AV    QM  EG
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG 205

Query: 378 VRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           + PN    S I+   P V   +       +H + ++ +++    VGT LL+ Y K   L 
Sbjct: 206 ICPNS---STIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLL 262

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT-SEGVKPNEFTFSSVINAC 489
            A K+F+++  ++ V+WSAM+ GY      + A++++ Q+   + + P   T  SV+ AC
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
            A    + +G++ H   IK      + + + L++MY+K G I+ A   F     +D VS+
Sbjct: 323 -AKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSF 381

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           ++++ G  Q+G+   AL +F+ M+   ++ D  T +GV+ AC+H   +  G      ++ 
Sbjct: 382 SAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 441

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
                 T+   + ++D+YS+ G +  A ++ NRM
Sbjct: 442 RGFATDTLI-CNALIDMYSKCGKISFAREVFNRM 474



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 188/370 (50%), Gaps = 8/370 (2%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            ++ ++ +++ C  +K L  A+++H   LKN  + D ++   L   Y  C ++  A ++F
Sbjct: 7   VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV--- 395
             +     V+ W  +I  +  NG  D A++ +  M   GVRPN +TY  +L A   +   
Sbjct: 67  DEIPN-PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125

Query: 396 -SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               ++H+H      E    V TAL++ Y K GIL EA ++F  +  +D+VAW+AM+AG 
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +  G  + AV++  Q+  EG+ PN  T   V+      + A+  GK  H   ++   +N 
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT-VGEAKALGHGKALHGYCVRRSFDNG 244

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + V + L+ MY+K   +  A ++F     R+ VSW++MI GY      K+ALE+F +M  
Sbjct: 245 VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMIL 304

Query: 575 QD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           +D ++   +T   V+ AC     +  G++    ++    +   +   + ++ +Y++ G++
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNT-LLSMYAKCGVI 363

Query: 634 EKAMDIINRM 643
           + A+   + M
Sbjct: 364 DDAIRFFDEM 373



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++ AC   S ++ + K+ H   +K   N    V   L  +Y     +  A  +F      
Sbjct: 14  LLEACIQ-SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP 72

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
            ++ WN +I  YA +G    A++++  M    +  +  T+  V+ AC+    +++G +  
Sbjct: 73  SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE-- 130

Query: 605 DIMVNEHHIYPTMEH--YSC--MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
              ++ H     +E   + C  +VD Y++ G+L +A  + + M        W  ++A C 
Sbjct: 131 ---IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCS 186

Query: 661 LISL 664
           L  L
Sbjct: 187 LYGL 190


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 276/760 (36%), Positives = 424/760 (55%), Gaps = 21/760 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++H   +K+    D +V   L  LY+  N V   RR+FD++   +V+ W  ++  YA N
Sbjct: 28  KKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWN 87

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              D  ++L+H M   G++PN +T+  VL   +    +   V++H+     G E    VC
Sbjct: 88  GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVC 147

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            AL+  Y K  ++ +A+ +F  M  RD + WN+M+AG     L  +A +    M   G  
Sbjct: 148 TALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGIC 207

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
              ST V V+      K L   + LH   ++   D    + TGL+  Y+KC  +  A KI
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT-REGVRPNGFTYSIILTAQPAVS 396
           F +M  +++ VSW+AMI G++ +  +  A+  F QM  ++ + P   T   +L A   ++
Sbjct: 268 FDVM-GVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 ++H +IIK        +G  LL+ Y K G++D+A + F+ ++ KD V++SA+++
Sbjct: 327 DLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVS 386

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G  Q G+   A+ I+R +   G+ P+  T   V+ AC+   AA++ G   H   I     
Sbjct: 387 GCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH-LAALQHGFCSHGYLIVRGFA 445

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               + +AL+ MYSK G I  A EVF R  + D+VSWN+MI GY  HG   +AL +F ++
Sbjct: 446 TDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDL 505

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
               L+ D ITFI ++++C+H+GLV EG+ +FD M  +  I P MEH  CMVD+  RAG+
Sbjct: 506 LALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGL 565

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNM 678
           +++A   I  MPF     +W  +L+ACR+               SL P  +  +VLLSN+
Sbjct: 566 IDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNI 625

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           Y+A G W + A +R    D  +KK  G SWIE+    ++F+ GD SH Q +QI  KLEEL
Sbjct: 626 YSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 685

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
              +K  GY+ + S+V QD+++E KE IL  HSE+LAIAFG++   AG P+ + KNLRVC
Sbjct: 686 LVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVC 745

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCH  IK ++ + +R+I VRD NRFHHFK G C+CGD+W
Sbjct: 746 GDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 158/560 (28%), Positives = 282/560 (50%), Gaps = 15/560 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P  + + +N+++  Y  +     A++L+  +  LG+     T   VLK C  L
Sbjct: 63  RRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGL 122

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G ++H      G   DV V T+LVD Y +   + + +R+F  M+  +VV+W +++
Sbjct: 123 LAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI 182

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G +   + D  ++L  +MQ EGI PNS T   VL  + +   +     +H   ++   +
Sbjct: 183 AGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD 242

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V   L+ MY K + +  AR +FD M  R+ ++W++M+ GYV ++   EA E F+ M
Sbjct: 243 NGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQM 302

Query: 272 GLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
            L  A + T  T  SV++ CA   +L   R+LH  ++K G   D  +   L+  Y+KCG 
Sbjct: 303 ILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGV 362

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA + F  M   KD VS++A++SG +QNG   +A++ F  M   G+ P+  T   +L 
Sbjct: 363 IDDAIRFFDXMNP-KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLP 421

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   ++  Q     H ++I   +     +  AL++ Y K G +  A +VF  +D  DIV+
Sbjct: 422 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS 481

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC- 505
           W+AM+ GY   G    A+ ++  L + G+KP++ TF  ++++C+     +E    F A  
Sbjct: 482 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMS 541

Query: 506 ---SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
              SI  ++ + +C    +V +  + G I+ A    +    + D+  W++++     H +
Sbjct: 542 RDFSIVPRMEHCIC----MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 597

Query: 562 TKKALEVFKEMRRQDLEFDG 581
            +   EV K+++    E  G
Sbjct: 598 IELGEEVSKKIQSLGPESTG 617



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 230/454 (50%), Gaps = 14/454 (3%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           A ++H   +KN     +SV + L  +YL    V  AR +FD + +   I WN ++  Y  
Sbjct: 27  AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAW 86

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           N     A + +++M   G    + T+  V+K C+    +    ++HS     G++ D  +
Sbjct: 87  NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            T L+  Y+KCG + +A ++FS M   +DVV+W AMI+G    G  D AV    QM  EG
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEG 205

Query: 378 VRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           + PN    S I+   P V   +       +H + ++ +++    VGT LL+ Y K   L 
Sbjct: 206 ICPNS---STIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLL 262

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT-SEGVKPNEFTFSSVINAC 489
            A K+F+++  ++ V+WSAM+ GY      + A++++ Q+   + + P   T  SV+ AC
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
            A    + +G++ H   IK      + + + L++MY+K G I+ A   F     +D VS+
Sbjct: 323 -AKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSF 381

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           ++++ G  Q+G+   AL +F+ M+   ++ D  T +GV+ AC+H   +  G      ++ 
Sbjct: 382 SAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 441

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
                 T+   + ++D+YS+ G +  A ++ NRM
Sbjct: 442 RGFATDTLI-CNALIDMYSKCGKISFAREVFNRM 474



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 188/370 (50%), Gaps = 8/370 (2%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            ++ ++ +++ C  +K L  A+++H   LKN  + D ++   L   Y  C ++  A ++F
Sbjct: 7   VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV--- 395
             +     V+ W  +I  +  NG  D A++ +  M   GVRPN +TY  +L A   +   
Sbjct: 67  DEIPN-PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125

Query: 396 -SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               ++H+H      E    V TAL++ Y K GIL EA ++F  +  +D+VAW+AM+AG 
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +  G  + AV++  Q+  EG+ PN  T   V+      + A+  GK  H   ++   +N 
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT-VGEAKALGHGKALHGYCVRRSFDNG 244

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + V + L+ MY+K   +  A ++F     R+ VSW++MI GY      K+ALE+F +M  
Sbjct: 245 VVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMIL 304

Query: 575 QD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           +D ++   +T   V+ AC     +  G++    ++    +   +   + ++ +Y++ G++
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNT-LLSMYAKCGVI 363

Query: 634 EKAMDIINRM 643
           + A+   + M
Sbjct: 364 DDAIRFFDXM 373



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++ AC   S ++ + K+ H   +K   N    V   L  +Y     +  A  +F      
Sbjct: 14  LLEACIQ-SKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNP 72

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
            ++ WN +I  YA +G    A++++  M    +  +  T+  V+ AC+    +++G +  
Sbjct: 73  SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE-- 130

Query: 605 DIMVNEHHIYPTMEH--YSC--MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
              ++ H     +E   + C  +VD Y++ G+L +A  + + M        W  ++A C 
Sbjct: 131 ---IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCS 186

Query: 661 LISL 664
           L  L
Sbjct: 187 LYGL 190


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 270/705 (38%), Positives = 411/705 (58%), Gaps = 86/705 (12%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N ++S Y K   +  +   FD +  RDS++W +M+ GY     + +A      M   G E
Sbjct: 84  NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            ++ T  +V+   A T+ L   +++HS ++K G+  + ++   L+  Y+KCG    A  +
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLA------------------------------- 366
           F  M  +KD+ SW AMI+ H+Q G +DLA                               
Sbjct: 204 FDRM-VVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRA 262

Query: 367 VNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSV------ 415
           ++ F +M R+  + P+ FT + +L+A   +       Q+H+HI+ T ++ S  V      
Sbjct: 263 LDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALIS 322

Query: 416 ---------------------------GTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                                       TALL+ Y+K G ++EA  +F+ + ++D+VAW+
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWT 382

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM+ GY Q G    A+ ++R +  E  +PN +T +++++  ++  A++  GKQ H  ++K
Sbjct: 383 AMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSL-ASLGHGKQIHGSAVK 441

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALE 567
           +    ++ VS+AL+TMY+K G+I SAS  F   R +RD VSW SMI   AQHGH ++ALE
Sbjct: 442 SGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F+ M  + L  D IT++GV +ACTHAGLV++G+QYFD+M +   I PT+ HY+CMVDL+
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            RAG+L++A + I +MP       W ++L+ACR              L+ L+P +S  Y 
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYS 621

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
            L+N+Y+A G W+E A++RK M D +VKKE G+SWIEVK+K ++F   D  HPQ N+IY 
Sbjct: 622 ALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYI 681

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
            ++++   +K  GY PDT+ VL D+++E KE IL  HSE+LAIAFGL++TP    L+I+K
Sbjct: 682 TMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMK 741

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVC DCHT IK ISKL  R+I+VRDT RFHHFK+G CSC DYW
Sbjct: 742 NLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 224/498 (44%), Gaps = 85/498 (17%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            FDR PQR+ V +  ++  Y     + +A+ +   + R G+     TL++VL +      
Sbjct: 102 FFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRC 161

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD---------------- 137
              G++VH   VK G   +V+VS SL+++Y +  +    + VFD                
Sbjct: 162 LETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIAL 221

Query: 138 ---------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFT 181
                           M E ++V+W S++SGY +   + R L++F +M  +  + P+ FT
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFT 281

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM------------------ 223
            ++VL   A+   +    Q+H+ ++  G ++   V NALISM                  
Sbjct: 282 LASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341

Query: 224 ---------------YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                          Y+K   + +A+ +FD ++DRD + W +M+ GY  + L+ EA   F
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLF 401

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +M          T  +++ + ++   L   +Q+H   +K+G  +  ++   L+  Y+K 
Sbjct: 402 RSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  AS+ F ++R  +D VSWT+MI    Q+G  + A+  F  M  EG+RP+  TY  +
Sbjct: 462 GSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521

Query: 389 LTAQPAVSPFQVHAHIIKTNYE------------KSFSVGTALLNAYVKKGILDEAAKVF 436
            +A         HA ++    +             + S    +++ + + G+L EA +  
Sbjct: 522 FSA-------CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574

Query: 437 ELID-EKDIVAWSAMLAG 453
           E +  E D+V W ++L+ 
Sbjct: 575 EKMPIEPDVVTWGSLLSA 592



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 146/316 (46%), Gaps = 41/316 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD    R+ V +  ++  Y +  L+ EA+NLF  +          TL+++L     L
Sbjct: 367 KNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSL 426

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSWTSL 150
                G+Q+H   VKSG    V+VS +L+ +Y +  ++    R FD +  E + VSWTS+
Sbjct: 427 ASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSM 486

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +   A++   +  LELF  M +EG++P+  T+  V       G+V    Q   M +K+  
Sbjct: 487 IIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM-MKDVD 545

Query: 211 EVVTSVCN--ALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFET 267
           +++ ++ +   ++ ++ ++ ++++A+   + M  + D +TW S+++          A   
Sbjct: 546 KIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS----------ACRV 595

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           + N+ L          V+  +L     E                  +    + L   YS 
Sbjct: 596 YKNIDLGK--------VAAERLLLLEPE------------------NSGAYSALANLYSA 629

Query: 328 CGKMEDASKIFSMMRE 343
           CGK E+A+KI   M++
Sbjct: 630 CGKWEEAAKIRKSMKD 645


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/775 (35%), Positives = 436/775 (56%), Gaps = 24/775 (3%)

Query: 85  LKTCGCLFDHVFGRQVHCECVK-SGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           L+ C    D   GR VH   V+  G  R D+  +  L+++Y +   +   RR+FD M E 
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           N+VS+ +L+  +A+    +    LF R++ EG + N F  +T+L +         A  VH
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           +   K G +    V + LI  Y    +V DA  VF+G+  +D++ W +MV+ Y  N+   
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            AF  F+ M ++G +       SV+K       + L + +H   +K   D + ++   L+
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+KCG ++DA   F M+    DV+  + MIS + Q+   + A   F ++ R  V PN 
Sbjct: 306 DMYAKCGDIKDARLAFEMI-PYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNE 364

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           ++ S +L A   +       Q+H H IK  +E    VG AL++ Y K   +D + K+F  
Sbjct: 365 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           + + + V+W+ ++ G++Q G  E A+ ++ ++ +  +   + T+SSV+ AC A +A++  
Sbjct: 425 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC-ASTASIRH 483

Query: 499 GKQFHACSI-KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
             Q H CSI K+  NN   + ++L+  Y+K G I  A +VF+   +RD++SWN++I GYA
Sbjct: 484 AGQIH-CSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
            HG    ALE+F  M + ++E + ITF+ +++ C+  GLV+ G   FD M  +H I P+M
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLIS 663
           EHY+C+V L  RAG L  A+  I  +P A SA VWR +L++C              +++ 
Sbjct: 603 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 662

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           ++P D   YVLLSNMYAA G   + A +RK M +  V+K  G SW+E+K + ++F  G +
Sbjct: 663 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 722

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
            HP    I + LE L+ +    GY PD + VL D+D E K  +L  HSERLA+A+GLV T
Sbjct: 723 DHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMT 782

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P G P++I+KNLR C DCHT   +ISK+ +R+I+VRD NRFHHF++G CSCGDYW
Sbjct: 783 PPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 248/507 (48%), Gaps = 5/507 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFDR P+RN V +  L+  + +    + A  LF  +R  G  +    L+++LK    +
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                   VH    K G   +  V + L+D Y   + V D   VF+ +   + V WT+++
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y+ N   +    +F +M+V G KPN F  ++VL        V     +H   IK   +
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  AL+ MY K   ++DAR  F+ +   D I  + M++ Y  +  + +AFE F  +
Sbjct: 296 TEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL 355

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +       +  SV++ C    +L   +Q+H+  +K G + D  +   LM  Y+KC  M
Sbjct: 356 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + + KIFS +R+  + VSW  ++ G  Q+G  + A++ FC+M    +     TYS +L A
Sbjct: 416 DSSLKIFSSLRDANE-VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             + +      Q+H  I K+ +     +G +L++ Y K G + +A KVF+ + E+DI++W
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISW 534

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +A+++GYA  G    A++++ ++    V+ N+ TF ++++ C++          F +  I
Sbjct: 535 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESA 534
              +  ++   + +V +  + G +  A
Sbjct: 595 DHGIKPSMEHYTCIVRLLGRAGRLNDA 621



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 170/333 (51%), Gaps = 12/333 (3%)

Query: 30  KDQSL-FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           KD  L F+  P  + +  + ++  Y + + +++A  LFL + R  +     +LSSVL+ C
Sbjct: 315 KDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 374

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +    FG+Q+H   +K G   D+ V  +L+D Y + N+++   ++F  + ++N VSW 
Sbjct: 375 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWN 434

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ G++++ + +  L +F  MQ   +     T+S+VL   A    +  A Q+H  + K+
Sbjct: 435 TIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKS 494

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                T + N+LI  Y K   +RDA  VF  + +RD I+WN++++GY  +    +A E F
Sbjct: 495 TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF 554

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR------TGLM 322
           + M  +  E    TFV+++ +C++T  +      H   L + +  DH I+      T ++
Sbjct: 555 DRMNKSNVESNDITFVALLSVCSSTGLVN-----HGLSLFDSMRIDHGIKPSMEHYTCIV 609

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               + G++ DA +    +      + W A++S
Sbjct: 610 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 642


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/636 (41%), Positives = 385/636 (60%), Gaps = 48/636 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NA++S Y KS  V D RAVFD M   D++++N+++AG+  N    +A E F  M   G E
Sbjct: 93  NAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFE 152

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T  T VSV+  C+   +++  +Q+H +++   +     +   L   Y+KCG ++ A  +
Sbjct: 153 STDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWL 212

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M   K+VVSW +MISG+LQNG  +     FC+M   G+ P+  T S IL+A      
Sbjct: 213 FDRMVN-KNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA------ 265

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
                                    Y + G +DEA K F  I EKD V W+ M+ G AQ 
Sbjct: 266 -------------------------YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQN 300

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G  E A+ ++R++  E V+P+ FT SSV+++C A  A++ QG+  H  ++   +++ L V
Sbjct: 301 GKEEDALLLFREMLLENVRPDNFTISSVVSSC-ARLASLCQGQAVHGKAVIFGVDHDLLV 359

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           SSALV MYSK G    A  VFKR   R+++SWNSMI GYAQ+G   +AL +++EM  ++L
Sbjct: 360 SSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENL 419

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D ITF+GV++AC HAGLV+ GQ YF  +   H + PT +HYSCM++L  RAG ++KA+
Sbjct: 420 KPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAV 479

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
           D+I  M F  +  +W T+L+ CR              L  L PH++  Y++LSN+YAA G
Sbjct: 480 DLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACG 539

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W++ A VR LM + K+KK A YSWIE+ N+ + F+A D +H ++ QIY +L  L  +L+
Sbjct: 540 RWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQ 599

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG-APLQIVKNLRVCGDCH 802
           ++G+ PDT+ VL D+ +E K   +  HSE+LA+AF L+  P G  P++I+KN+RVCGDCH
Sbjct: 600 ESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCH 659

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             +K +SK+ RR I++RD NRFHHF EG CSC D W
Sbjct: 660 VFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 220/435 (50%), Gaps = 44/435 (10%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RDV    +++  Y ++ NVED R VFD M+  + VS+ ++++G++ N  + + LE F RM
Sbjct: 87  RDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRM 146

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-GEVVTSVCNALISMYLKSKM 229
           Q EG +   +T  +VL   +    +    Q+H  ++    GE V  V NAL +MY K   
Sbjct: 147 QEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVF-VWNALTNMYAKCGA 205

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           +  AR +FD M +++ ++WNSM++GY+ N                               
Sbjct: 206 LDQARWLFDRMVNKNVVSWNSMISGYLQN------------------------------- 234

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
                +     +L  ++  +G+  D    + ++ AY +CG +++A K F  ++E KD V 
Sbjct: 235 ----GQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKE-KDKVC 289

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           WT M+ G  QNG  + A+  F +M  E VRP+ FT S ++++   ++       VH   +
Sbjct: 290 WTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAV 349

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
               +    V +AL++ Y K G   +A  VF+ +  +++++W++M+ GYAQ G    A+ 
Sbjct: 350 IFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALA 409

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK-QFHACSIKAKLNNALCVSSALVTM 524
           +Y ++  E +KP+  TF  V++AC   +  VE+G+  F++ S    +N      S ++ +
Sbjct: 410 LYEEMLHENLKPDNITFVGVLSACMH-AGLVERGQGYFYSISKIHGMNPTFDHYSCMINL 468

Query: 525 YSKKGNIESASEVFK 539
             + G ++ A ++ K
Sbjct: 469 LGRAGYMDKAVDLIK 483



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 193/434 (44%), Gaps = 56/434 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD+    + V YN ++  +  +    +AL  F+ ++  G      T  SVL  C  L
Sbjct: 109 RAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQL 168

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G+Q+H   V +     V V  +L ++Y +   ++  R +FD M   NVVSW S++
Sbjct: 169 LDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMI 228

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +N   +   +LF  MQ  G+ P+  T S +L                         
Sbjct: 229 SGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNIL------------------------- 263

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                     S Y +   + +A   F  ++++D + W +M+ G   N    +A   F  M
Sbjct: 264 ----------SAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREM 313

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L        T  SV+  CA    L   + +H + +  G+D D  + + L+  YSKCG+ 
Sbjct: 314 LLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGET 373

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA  +F  M   ++V+SW +MI G+ QNG    A+  + +M  E ++P+  T+  +L+A
Sbjct: 374 ADAWIVFKRML-TRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSA 432

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDEAAKVFE-L 438
                   +HA +++      +S+             + ++N   + G +D+A  + + +
Sbjct: 433 -------CMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSM 485

Query: 439 IDEKDIVAWSAMLA 452
             E + + WS +L+
Sbjct: 486 TFEPNCLIWSTLLS 499


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 279/816 (34%), Positives = 457/816 (56%), Gaps = 63/816 (7%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T  +VL +C    D   GR +H     S F RD  V  +L+ +Y + +++ D R VF+ M
Sbjct: 9   TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68

Query: 140 N--ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
           +  + NVVSW ++++ YA+N  +   L L+ RM ++G+  +  TF +VLG  +    +A 
Sbjct: 69  DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS---LAQ 125

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             ++H  V  +G +   S+ NAL++MY +   V DA+ +F  ++ RD  +WN+++  +  
Sbjct: 126 GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQ 185

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +     A   F  M     +   +T+++VI   +T + L   R++H++++ NG D D  +
Sbjct: 186 SGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVV 244

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            T L+  Y KCG   +A ++F  M++ +D+VSW  MI  ++QNG    A+  + ++  EG
Sbjct: 245 ATALINMYGKCGSSHEAREVFDKMKK-RDMVSWNVMIGCYVQNGDFHEALELYQKLDMEG 303

Query: 378 VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            +    T+  IL A  +V        VH+HI++   +   +V TAL+N Y K G L+EA 
Sbjct: 304 FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEAR 363

Query: 434 KVFELIDEKDIVAWS----------------------------------AMLAGYAQIGD 459
           KVF  +  +D VAWS                                  AM+  Y Q G 
Sbjct: 364 KVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGC 423

Query: 460 TEGAVKIYRQLT-SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
              A+KI+R++T + G+KP+  TF +V+ AC A    + + K  HA   +++L + + V+
Sbjct: 424 AVAAMKIFREMTGAAGLKPDAVTFIAVLEAC-ASLGRLSEVKALHAQISESELESNVVVT 482

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           + L+ MY++ G++E A  +F   +++ +VSW +M+  ++Q+G   +AL++F+EM  + ++
Sbjct: 483 NTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D +T+  ++  CTH G +++G +YF  M   H + PT +H++ MVDL  R+G L  A +
Sbjct: 543 PDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKE 602

Query: 639 IINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGH 684
           ++  MPF      W T L ACR+                L P  +A Y+ +SN+YAA G 
Sbjct: 603 LLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGM 662

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W++ A VRK M +R +KK  G S+IEV  K + F +G   HP++++I  +L  L   ++ 
Sbjct: 663 WEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRA 722

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT-PAGAPLQIVKNLRVCGDCHT 803
           AGY PDT  VL D+ +  KE +L  HSE++AIAFGLV++  +G P+++VKNLRVC DCHT
Sbjct: 723 AGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHT 782

Query: 804 VIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
             K I+++  RDI++RD NRFH F  +G CSCGDYW
Sbjct: 783 ATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 288/563 (51%), Gaps = 49/563 (8%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           QRN V +N ++  Y ++    EAL L+  +   GL     T  SVL  C  L     GR+
Sbjct: 72  QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GRE 128

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H     SG     +++ +LV +Y R  +V D +R+F  +   +  SW +++  ++++  
Sbjct: 129 IHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGD 188

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
               L +F  M+ + +KPNS T+  V+   +   ++    ++H  ++ NG +    V  A
Sbjct: 189 WSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATA 247

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI+MY K     +AR VFD M+ RD ++WN M+  YV N    EA E +  + + G + T
Sbjct: 248 LINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRT 307

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           ++TFVS++  C++ K L   R +HS +L+ G+D +  + T L+  Y+KCG +E+A K+F+
Sbjct: 308 KATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFN 367

Query: 340 MMREM---------------------------------KDVVSWTAMISGHLQNGAIDLA 366
            M+                                   +D + W AMI+ ++QNG    A
Sbjct: 368 AMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAA 427

Query: 367 VNFFCQMT-REGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLN 421
           +  F +MT   G++P+  T+  +L A  ++        +HA I ++  E +  V   L+N
Sbjct: 428 MKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLIN 487

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            Y + G L+EA ++F    EK +V+W+AM+A ++Q G    A+ +++++  EGVKP++ T
Sbjct: 488 MYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVT 547

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS---SALVTMYSKKGNIESASEVF 538
           ++S++  CT    ++EQG ++   +  A+L+     +   +A+V +  + G +  A E+ 
Sbjct: 548 YTSILFVCT-HGGSLEQGWRYF--TDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELL 604

Query: 539 KRQR-KRDLVSWNSMICGYAQHG 560
           +    + D V+W + +     HG
Sbjct: 605 ESMPFEPDPVAWMTFLTACRIHG 627



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/502 (31%), Positives = 270/502 (53%), Gaps = 48/502 (9%)

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           +P++ TF TVL   +  G VA    +H  +  +  E  T V NALISMY K   + DAR+
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 236 VFDGME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           VF+ M+   R+ ++WN+M+A Y  N    EA   +  M L G      TFVSV+  C++ 
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L   R++H++V  +G+D   ++   L+  Y++ G + DA ++F  + + +D  SW A+
Sbjct: 123 --LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL-QTRDETSWNAV 179

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT--AQPAVSP--FQVHAHIIKTNY 409
           I  H Q+G    A+  F +M  + ++PN  TY  +++  + P V P   ++HA I+   +
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +    V TAL+N Y K G   EA +VF+ + ++D+V+W+ M+  Y Q GD   A+++Y++
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQK 298

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           L  EG K  + TF S++ AC++   A+ QG+  H+  ++  L++ + V++ALV MY+K G
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVK-ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK------------------------- 564
           ++E A +VF   + RD V+W+++I  YA +G+ K                          
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITT 417

Query: 565 ---------ALEVFKEMR-RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
                    A+++F+EM     L+ D +TFI V+ AC   G + E  +     ++E  + 
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE-VKALHAQISESELE 476

Query: 615 PTMEHYSCMVDLYSRAGMLEKA 636
             +   + ++++Y+R G LE+A
Sbjct: 477 SNVVVTNTLINMYARCGSLEEA 498



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 173/375 (46%), Gaps = 36/375 (9%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S + + +FD+  +R+ V +N ++  Y ++    EAL L+  +   G     +T  S+L  
Sbjct: 258 SHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGA 317

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  +     GR VH   ++ G   +V V+T+LV++Y +  ++E+ R+VF+ M   + V+W
Sbjct: 318 CSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAW 377

Query: 148 TSLLSGYARN----------KMNDRV------------------------LELFHRMQ-V 172
           ++L+  YA N          K+ DR+                        +++F  M   
Sbjct: 378 STLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGA 437

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G+KP++ TF  VL   A  G ++    +H  + ++  E    V N LI+MY +   + +
Sbjct: 438 AGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEE 497

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  +F   +++  ++W +MVA +     + EA + F  M L G +    T+ S++ +C  
Sbjct: 498 AERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTH 557

Query: 293 TKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
              L    +  + + + +G+    +    ++    + G++ DA ++   M    D V+W 
Sbjct: 558 GGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWM 617

Query: 352 AMISGHLQNGAIDLA 366
             ++    +G ++L 
Sbjct: 618 TFLTACRIHGKLELG 632


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/832 (33%), Positives = 460/832 (55%), Gaps = 28/832 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD    R+ V +  +L  Y ++    +AL     +   G+     T  +++  C  L
Sbjct: 113 EKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKL 172

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR++H   +  G   D  +  +LV +Y    + +D + VF  M +S+V+ WT+++
Sbjct: 173 RLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMI 232

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G ++N   +  L +F +M +EG+K N  T+ +++ V  +   V     +   ++++   
Sbjct: 233 AGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFC 292

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T +  +LIS+Y +  ++  A+ + + M  RD + WN+MV     N  + EA      M
Sbjct: 293 SSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRM 352

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCG 329
            + G    + T++SV++ CA  + L   R++H++VL  G+     +  G  ++  Y KCG
Sbjct: 353 DMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGL-LQREVAVGNSVITMYGKCG 411

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           + E A  +F  M   KD VSW A+I+  + N     A+  F  M  EG+R N FT   +L
Sbjct: 412 QTEAAMSVFEAMPR-KDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLL 470

Query: 390 TAQPAVSPFQVHAHI-----IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
            A   +   ++   I            S +VG +++N Y + G L +A K F+ ++EK +
Sbjct: 471 EACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGL 530

Query: 445 VAWSAMLAGYAQIGDTEG--AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           VAWS +LA YAQ  D  G  A K ++++ +EG+KP E TF S ++AC A  A +E G+  
Sbjct: 531 VAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAA-MATLEHGRSM 589

Query: 503 HA-CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
           H   +    +  +L + + ++ MY K G+   A  VF +  ++ L+SWNS+I  YA +GH
Sbjct: 590 HRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGH 649

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
             +AL   +EM  Q  + D  T + ++   +HAGL++ G ++F   + +H + P+     
Sbjct: 650 ALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLK 709

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATV-WRTVLAAC--------------RLISLQP 666
           C+VDL +R G L+ A ++I   P   + T+ W T+LAAC              R+  L+P
Sbjct: 710 CLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEP 769

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
             S  +V+L+N+YA+ G W + +R+RK+M    VKKE G SWIE+    + F++G+  HP
Sbjct: 770 QHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHP 829

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           +  +I   LE+L+ R+++AGY PDT+ V+ D+++  KE ILS+HSERLAI FGL++T  G
Sbjct: 830 KIREICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPG 889

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             +++VKNLRVC DCH   K+IS +  R+IVVRD++RFHHFK G CSCGD+W
Sbjct: 890 ETIRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 169/548 (30%), Positives = 283/548 (51%), Gaps = 20/548 (3%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +   V D   VFD ++  NV SWT +++ Y++N      LELF RMQ EG +P+   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F   L   A  G +    Q+H+ V+ +G      + N+L++MY K + V  A  VFDGM 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            RD ++W +M+A Y  N    +A E  + M   G +  + TFV+++ +CA  + L L R+
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H +++  G++ D  +   L+  Y  CG  +D   +FS M +   V+ WT MI+G  QNG
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQ-SSVLLWTTMIAGCSQNG 239

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGT 417
             +  +  F +M  EGV+ N  TY  ++     +   +    + A I+++ +  S  + T
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           +L++ Y + GILD A  + E + ++D+VAW+AM+   AQ GD   A+ + R++  EG   
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHA----CSIKAKLNNALCVSSALVTMYSKKGNIES 533
           N+ T+ SV+ AC A   A+ QG++ HA    C +   L   + V ++++TMY K G  E+
Sbjct: 360 NKVTYLSVLEAC-ANLEALSQGREIHARVLLCGL---LQREVAVGNSVITMYGKCGQTEA 415

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A  VF+   ++D VSWN++I     +   + ALE+F  M  + L  +  T + ++ AC  
Sbjct: 416 AMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGG 475

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML---EKAMDIINRMPFAASAT 650
              +   +Q             +    + +V++Y+R G L   +KA D +      A   
Sbjct: 476 LEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVA--- 532

Query: 651 VWRTVLAA 658
            W  +LAA
Sbjct: 533 -WSIILAA 539



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 163/621 (26%), Positives = 310/621 (49%), Gaps = 14/621 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD    +N   +  ++  Y ++  ++EAL LF  ++  G           L  C    +
Sbjct: 14  VFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGE 73

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GRQ+H   V SG   ++ +S SLV++Y +  +V    +VFD M   +VVSWT++L+ 
Sbjct: 74  LDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAV 133

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+N    + LE   RM  EG+KPN  TF T++ V A   ++    ++H  +I  G E  
Sbjct: 134 YAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPD 193

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + NAL+ MY       D ++VF  M     + W +M+AG   N  + E    F  M L
Sbjct: 194 GILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDL 253

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +    T++S++++C     ++    + +++L++       + T L+  Y +CG ++ 
Sbjct: 254 EGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDR 313

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +   M + +DVV+W AM++   QNG    A++   +M  EG   N  TY  +L A  
Sbjct: 314 AKGLLEHMYQ-RDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACA 372

Query: 394 AVSPF----QVHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            +       ++HA ++     ++  +VG +++  Y K G  + A  VFE +  KD V+W+
Sbjct: 373 NLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWN 432

Query: 449 AMLAGYAQIGDT--EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH-AC 505
           A++   A +G++  + A++++  +  EG++ NEFT  S++ AC      ++  +Q H   
Sbjct: 433 AVI--NASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLE-DLKLARQIHARA 489

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH--GHTK 563
           +      N+  V +++V MY++ G++  A + F    ++ LV+W+ ++  YAQ   G  +
Sbjct: 490 AAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGR 549

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +A + F+EM  + ++   +TF+  + AC     ++ G+           +  ++   + +
Sbjct: 550 RAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTI 609

Query: 624 VDLYSRAGMLEKAMDIINRMP 644
           +++Y + G    A  + ++MP
Sbjct: 610 INMYGKCGSPSDAKLVFDQMP 630


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/861 (32%), Positives = 483/861 (56%), Gaps = 62/861 (7%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  Q LFD  P R+ + ++ L+  Y R     +A  LF  +   GL   G +L+S+LK  
Sbjct: 72  KCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVS 131

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN--ESNVVS 146
               +    RQ+H   +++GF  D  +  + + +Y R   +ED +RVFD+ +    +++ 
Sbjct: 132 CSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILL 191

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W S+++ Y  +     VL LF +M   G+  P   T+++V+      G       VH  +
Sbjct: 192 WNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRI 251

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           IK G E  T++ N+L++ Y K   ++ A  +F+ +  +D ++WN+M+A    NE   +  
Sbjct: 252 IKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIA---ANE---QRG 304

Query: 266 ETFNNMGL--------AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           E  N +GL           +  R TF+S++   +    LR  R++H+ + +  ++ D +I
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              L+  YSKC ++  A +IF  +  ++D++SW +M++G+ QN       + F +M   G
Sbjct: 365 TNSLITFYSKCREVGKAREIFERLL-LRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSG 423

Query: 378 VRPNGFTYSIILTAQPAVSPF--------QVHAHIIK--TNYEKSFSVGTALLNAYVKKG 427
           + P+  + +II  A    S          ++H +I++  T    S SV  A+L  Y K  
Sbjct: 424 IEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFN 483

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            + +A K+F+ +  +D  +W+AM+ GY++    E  + I+  +  +G   +  + S ++ 
Sbjct: 484 RIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLT 543

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNA---------LCVSSALVTMYSKKGNIESASEVF 538
           +C     +++ GKQFHA  + AKL N          L +++AL++MYSK G+I+ A++VF
Sbjct: 544 SC-GRLVSLQLGKQFHA--VVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVF 600

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
            +  ++D+ SW +MI G A HG   +AL++F+ M+   ++ + +TF+ ++ AC H GLV 
Sbjct: 601 LKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQ 660

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR-----MPFAASA-TVW 652
           EG  YFD M N++ + P++EHY+CM+DL+ R+G  ++A  ++        P+      +W
Sbjct: 661 EGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLW 720

Query: 653 RTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
           + +L AC              +++ L+P D A Y+LL+N+YA++G W++  +VRK M D+
Sbjct: 721 KVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDK 780

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
            ++KE G SWI+  N+ + F+AGD+ HPQ  +IY KL +L+   +  GY P T  VL D+
Sbjct: 781 GLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDV 840

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAG-APLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           D+  KEAIL  HSE+LA++FGL+    G   ++++KNLRVC DCH+ +K  S LE+R+I+
Sbjct: 841 DETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREIL 900

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           +RD+ RFH F++G CSCGDYW
Sbjct: 901 LRDSQRFHLFRDGSCSCGDYW 921



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 158/605 (26%), Positives = 281/605 (46%), Gaps = 87/605 (14%)

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           S C+  +    + + ++ A+ +FD   +RD I+W++++A Y       +AF  F  M   
Sbjct: 56  SACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGE 115

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G +    +  S++K+  +T E+ L RQLH   ++ G   D  IR   +  YS+CG +EDA
Sbjct: 116 GLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDA 175

Query: 335 SKIFSMMREMK-DVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQ 392
            ++F     +  D++ W ++I+ ++ +G     +  FC+M   G V P   TY+ ++ A 
Sbjct: 176 QRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNAC 235

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            +    +    VH  IIK   E + ++  +L+  Y K G L  A+++FE I  KD+V+W+
Sbjct: 236 GSSGEEKYGAMVHGRIIKAGLEAT-NLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWN 294

Query: 449 AMLAGYAQIGDTEGAVKIYRQL--TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           AM+A   Q G+ E A+ ++R++      V+PN  TF S+++A +  S A+  G++ HA  
Sbjct: 295 AMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLS-ALRCGREIHAHI 353

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            +  L     ++++L+T YSK   +  A E+F+R   RD++SWNSM+ GY Q+    +  
Sbjct: 354 FRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCF 413

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTH--AGLV-----DEGQQY---------------- 603
           ++FK M    +E D  +   +  A +   +GL+      E   Y                
Sbjct: 414 DIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSN 473

Query: 604 --------FDIMVNEHHIYPTMEH-----YSCMVDLYSRAGMLEKAMDI---INRMPFAA 647
                   F+ + +   I+  M++     ++ M+D YSR    E  + I   I +  F  
Sbjct: 474 AILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPL 533

Query: 648 SATVWRTVLAAC-RLISLQ------------------PHDSAIYVL---LSNMYAATGHW 685
                  +L +C RL+SLQ                  PH  ++  +   L +MY+  G  
Sbjct: 534 DHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSI 593

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
           ++ A+V   M  + V     +SW        + + G   H  + +     E    R+K  
Sbjct: 594 KDAAQVFLKMERKDV-----FSWT-------AMITGCAHHGLAVEALQLFE----RMKTD 637

Query: 746 GYKPD 750
           G KP+
Sbjct: 638 GIKPN 642


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 285/805 (35%), Positives = 435/805 (54%), Gaps = 82/805 (10%)

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
           ++ T +V  Y+     +D   V + +  S  V W  L+  + +    DR + +  RM   
Sbjct: 84  SLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRA 143

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G KP+ FT    L    +         +H ++  NG E    VCNAL++MY +   + DA
Sbjct: 144 GTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDA 203

Query: 234 RAVFDGMEDR---DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT---RSTFVSVI 287
             VFD +  +   D I+WNS+VA +V       A E F+ M +   E     RS  +S++
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIV 263

Query: 288 KL---CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
            +   CA+ K L   +++HS  ++NG   D  +   L+  Y+KCG M DA K+F++M E 
Sbjct: 264 NILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM-EF 322

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT-------AQPAVSP 397
           KDVVSW AM++G+ Q+G    A   F  M +E +  +  T+S ++        +Q A+  
Sbjct: 323 KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382

Query: 398 FQ--------------------------------VHAHIIK------------TNYEKSF 413
           FQ                                +HA+ +K                +  
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 414 SVGTALLNAYVKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            V  AL++ Y K      A  +F+ I   E+++V W+ M+ GYAQ GD+  A+KI+ ++ 
Sbjct: 443 MVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502

Query: 472 SE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL--NNALCVSSALVTMYSK 527
           S+   V PN +T S ++ AC A  AA+  GKQ HA   +      +   V++ L+ MYSK
Sbjct: 503 SKPYAVAPNAYTISCILMAC-AHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSK 561

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G++++A  VF    KR+ VSW SM+ GY  HG  K+AL++F +M++     D I+F+ +
Sbjct: 562 CGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVL 621

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+H+G+VD+G  YFDIM  ++ +  + EHY+C++DL +R G L+KA   I  MP   
Sbjct: 622 LYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEP 681

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           SA +W  +L+ACR              L++++  +   Y L+SN+YA    W++ AR+R+
Sbjct: 682 SAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQ 741

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
           LM    +KK  G SW++ K  T SF  GD SHP S +IYS LE L  R+K  GY P+T++
Sbjct: 742 LMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNF 801

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
            L D+DDE K  +LS+HSE+LA+A+GL+ T  G P++I KNLRVCGDCH+    ISK+  
Sbjct: 802 ALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVD 861

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
            +I+VRD++RFHHFK G CSCG YW
Sbjct: 862 HEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 250/540 (46%), Gaps = 66/540 (12%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           +K   S+ +R      V +N L+ E+ ++     A+ +   + R G      TL   LK 
Sbjct: 99  TKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKA 158

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE---SNV 144
           CG L  +  GR +H     +GF  +V V  +LV +Y R  ++ED   VFD++      +V
Sbjct: 159 CGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDV 218

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRM------QVEGIKPNSFTFSTVLGVLADEGIVATA 198
           +SW S+++ + +       LELF  M      +    + +  +   +L   A    +   
Sbjct: 219 ISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQI 278

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            ++H+  I+NG      VCNALI  Y K   + DA  VF+ ME +D ++WN+MV GY  +
Sbjct: 279 KEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQS 338

Query: 259 ELHMEAFETFNNMG-----------------------------------LAGAELTRSTF 283
                AFE F NM                                    L G+E    T 
Sbjct: 339 GNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTI 398

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGI------------DFDHNIRTGLMVAYSKCGKM 331
           +S++  CA+   L    ++H+  LK  +              D  +   L+  YSKC   
Sbjct: 399 ISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSF 458

Query: 332 EDASKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSII 388
           + A  IF S+ R  ++VV+WT MI G+ Q G  + A+  F +M  +   V PN +T S I
Sbjct: 459 KAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCI 518

Query: 389 LTAQPAVSPF----QVHAHIIKTN-YEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           L A   ++      Q+HA++ + + YE S + V   L++ Y K G +D A  VF+ + ++
Sbjct: 519 LMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR 578

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           + V+W++M++GY   G  + A+ I+ ++   G  P++ +F  ++ AC+  S  V+QG  +
Sbjct: 579 NEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH-SGMVDQGLNY 637



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 179/367 (48%), Gaps = 38/367 (10%)

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF--------------------D 314
           G +++ + F S++K C   + +   RQ+H +++  G+                       
Sbjct: 26  GRDVSPTHFASLLKEC---RSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSP 82

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
            ++ TG++ +Y  CG  +DA  +   +      V W  ++  H++ G +D A+   C+M 
Sbjct: 83  KSLGTGVVASYLACGATKDALSVLERVTP-SPAVWWNLLVREHIKEGHLDRAIGVSCRML 141

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           R G +P+ FT    L A   +  +     +H  I    +E +  V  AL+  Y + G L+
Sbjct: 142 RAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLE 201

Query: 431 EAAKVFELIDEK---DIVAWSAMLAGYAQIGDTEGAVKIYRQLT------SEGVKPNEFT 481
           +A+ VF+ I  K   D+++W++++A + +  +   A++++ +++      +   + +  +
Sbjct: 202 DASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIIS 261

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
             +++ AC A   A+ Q K+ H+ +I+        V +AL+  Y+K G++  A +VF   
Sbjct: 262 IVNILPAC-ASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM 320

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
             +D+VSWN+M+ GY Q G+   A E+F+ MR++++  D IT+  VI      G   E  
Sbjct: 321 EFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEAL 380

Query: 602 QYFDIMV 608
             F  M+
Sbjct: 381 DAFQQMI 387


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 286/829 (34%), Positives = 449/829 (54%), Gaps = 28/829 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLF---GSTLSSVLKTCGC 90
           LF+  P R    +N L+  Y       EA+ ++  +R    P     G TL+SVLK CG 
Sbjct: 117 LFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGA 176

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES--NVVSWT 148
             D   G +VH   VK G  +   V+ +L+ +Y +   ++   RVF+ + +   +V SW 
Sbjct: 177 EGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWN 236

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S++SG  +N      L LF  MQ  G   NS+T   VL V A+ G+++   ++H  ++K 
Sbjct: 237 SVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKC 296

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G E+    CNAL+ MY K   V  A  VF  + ++D I+WNSM++ YV N  + EA + F
Sbjct: 297 GSELNIQ-CNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFF 355

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G +   +  VS+         L   R+ H+  +K  +  D  +   LM  Y KC
Sbjct: 356 GEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKC 415

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +E ++K+F  M  ++D +SWT +++   Q+     A+    ++ +EG+  +      I
Sbjct: 416 GSIECSAKVFESM-GIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSI 474

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L     +       QVH + I+ N      +   L++ Y + G  D +  +F+ +++KDI
Sbjct: 475 LETCCGLKSISLLKQVHCYAIR-NGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDI 533

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+W++M+      G   GAV ++ ++    ++P+     S++ A  A  +++ +GKQ H 
Sbjct: 534 VSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVA-IAGLSSLTKGKQVHG 592

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             I+        V S+LV MYS  G++  A  VF+R + +D+V W +MI     HGH K+
Sbjct: 593 FLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQ 652

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           A+++FK M +  L  D ++F+ ++ AC+H+ LV+EG+ Y DIMV+++ + P  EHY+C+V
Sbjct: 653 AIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVV 712

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           D+  R+G  E+A + I  MP    + VW  +L ACR              L+ L+P +  
Sbjct: 713 DILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPG 772

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            Y+L+SN++A  G W      R  M +R ++K    SWIE+ N  ++F +GD  H  S  
Sbjct: 773 NYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEA 832

Query: 731 IYSKLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
           I+ KL E++  L ++ GY  DT +VL D  +E K  +L +HSER+AIAFGL++T  G P+
Sbjct: 833 IHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPI 892

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +I KNLRVCGDCH   KL+SKL  RDIVVRD NRFHHF  G CSC D+W
Sbjct: 893 RIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/560 (29%), Positives = 291/560 (51%), Gaps = 21/560 (3%)

Query: 97  GRQVHCECVKSGFAR---DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           GRQVH   V +G      D  ++T LV +Y R   V+D RR+F+ M    V SW +L+  
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 154 YARNKMNDRVLELFHRMQVE---GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           Y  +      + ++  M+     G  P+  T ++VL     EG      +VH + +K G 
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVAGYVTNELHMEAFETF 268
           +  T V NALI MY K  ++  A  VF+ ++   RD  +WNS+V+G V N   +EA   F
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-TGLMVAYSK 327
             M  AG  +   T V+V+++CA    L L R+LH+ +LK G +   NI+   L+V Y+K
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSEL--NIQCNALLVMYAK 313

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G+++ A ++F  + E KD +SW +M+S ++QN     A++FF +M + G +P+      
Sbjct: 314 YGRVDSALRVFGQIAE-KDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVS 372

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           + +A   +S      + HA+ IK        VG  L++ Y+K G ++ +AKVFE +  +D
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRD 432

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            ++W+ +LA +AQ      A+++  +L  EG+  +     S++  C     ++   KQ H
Sbjct: 433 HISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLK-SISLLKQVH 491

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
             +I+  L + L + + L+ +Y + G  + +  +F+R  K+D+VSW SMI     +G   
Sbjct: 492 CYAIRNGLLD-LILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLN 550

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH-YSC 622
            A+ +F EM++ +++ D +  + ++ A      + +G+Q    ++  +  +P      S 
Sbjct: 551 GAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRN--FPIEGPVVSS 608

Query: 623 MVDLYSRAGMLEKAMDIINR 642
           +VD+YS  G +  A+ +  R
Sbjct: 609 LVDMYSGCGSMNYAIRVFER 628



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 222/448 (49%), Gaps = 13/448 (2%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM---GLAGA 276
           L+ MY +   V DAR +F+GM  R   +WN++V  Y+++    EA   +  M      G+
Sbjct: 101 LVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGS 160

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                T  SV+K C    + R   ++H   +K G+D    +   L+  Y+KCG ++ A +
Sbjct: 161 APDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALR 220

Query: 337 IFS-MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           +F  + ++ +DV SW +++SG +QNG    A+  F  M   G   N +T   +L     +
Sbjct: 221 VFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAEL 280

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                  ++HA ++K   E +     ALL  Y K G +D A +VF  I EKD ++W++ML
Sbjct: 281 GLLSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSML 339

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           + Y Q      A+  + ++   G +P+     S+ +A    S  +  G++FHA +IK +L
Sbjct: 340 SCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLS-RLNNGREFHAYAIKQRL 398

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +  L V + L+ MY K G+IE +++VF+    RD +SW +++  +AQ     +ALE+  E
Sbjct: 399 HTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILE 458

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           ++++ +  D +    ++  C     +   +Q     +    +   +E+   ++D+Y   G
Sbjct: 459 LQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENR--LIDIYGECG 516

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAAC 659
             + ++++  R+        W +++  C
Sbjct: 517 EFDHSLNLFQRVE-KKDIVSWTSMINCC 543



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 13/219 (5%)

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           SA L    + GD   A+   RQLT+    P    +  V++   A  AA E G+Q HA ++
Sbjct: 30  SASLKRLCKEGDLRQAL---RQLTTR-APPAREHYGWVLDLVAARRAAAE-GRQVHAHAV 84

Query: 508 K-AKLN--NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
               LN  +   +++ LV MY + G ++ A  +F     R + SWN+++  Y   G   +
Sbjct: 85  TTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGE 144

Query: 565 ALEVFKEMRRQDLEF---DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
           A+ V+  MR         DG T   V+ AC   G    G +   + V       T+   +
Sbjct: 145 AMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLV-AN 203

Query: 622 CMVDLYSRAGMLEKAMDIINRMPF-AASATVWRTVLAAC 659
            ++ +Y++ G+L+ A+ +   +   A     W +V++ C
Sbjct: 204 ALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/671 (38%), Positives = 410/671 (61%), Gaps = 51/671 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NAL+S    ++++ D  ++F  M  RD++++N+++AG+     H  A   ++ +  AG+ 
Sbjct: 76  NALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSS 135

Query: 278 L--TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           +  +R T  +++   +   +  L RQ H Q+L+ G   +  + + L+  Y+K G + DA 
Sbjct: 136 VRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAK 195

Query: 336 KIFSMM------------------------REM------KDVVSWTAMISGHLQNGAIDL 365
           ++F  M                        R +      +D ++WT M++G  QNG    
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLN 421
           A+NFF +M  +G+  + +T+  ILTA  A+S      Q+HA+II+T+Y+ +  VG+AL++
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            Y K   +  A   F  +  K+I++W+A++ GY Q G +E AV+++ ++  +G+ P++FT
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFT 375

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
             SVI++C A  A++E+G QFH  ++ + L + + VS+ALVT+Y K G+IE A  +F   
Sbjct: 376 LGSVISSC-ANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
              D VSW +++ GYAQ G  K+ +++F++M  +D++ DG+TFIGV++AC+ AG V++G 
Sbjct: 435 LFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGC 494

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL 661
            YF  M  +H I P  +HY+CM+DLYSR+G L++A + I +MP    A  W T+L+ACRL
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554

Query: 662 --------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                         + + P + A YVLL +M+A  G+W + A++R+ M DR+VKKE G S
Sbjct: 555 RGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCS 614

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           WI+ KNK + F A D SHP S  IY KLE L++++ + GYKPD S VL D+ D  K  ++
Sbjct: 615 WIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMV 674

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
           S HSE+LAIAFGL+  P   P++IVKNLRVC DCH   KLISK+  RDI+VRD  RFH F
Sbjct: 675 SHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKF 734

Query: 828 KEGLCSCGDYW 838
             G+CSCGD+W
Sbjct: 735 SNGVCSCGDFW 745



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 218/475 (45%), Gaps = 54/475 (11%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLKTCGC 90
           SLF    QR+ V YN ++  +     H  A+ L+  + R G  +  S  T+S+++     
Sbjct: 93  SLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASA 152

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV----- 145
           L D   GRQ HC+ ++ GF  +  V + LV +Y +   + D +RVFD+M+  NVV     
Sbjct: 153 LGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTM 212

Query: 146 --------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
                                     +WT++++G+ +N +  + L  F RM+ +GI  + 
Sbjct: 213 ITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQ 272

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           +TF ++L        +    Q+H  +I+   +    V +AL+ MY K + ++ A   F  
Sbjct: 273 YTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRR 332

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  ++ I+W +++ GY  N    EA   F+ M   G +    T  SVI  CA    L   
Sbjct: 333 MSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEG 392

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            Q H   L +G+     +   L+  Y KCG +EDA ++F  M    D VSWTA+++G+ Q
Sbjct: 393 AQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML-FHDQVSWTALVTGYAQ 451

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQV----HAHI-IKT 407
            G     ++ F +M  + V+P+G T+  +L+A       +   S F      H  + I  
Sbjct: 452 FGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDD 511

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
           +Y       T +++ Y + G L EA + + ++    D + W  +L+     GD E
Sbjct: 512 HY-------TCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/505 (25%), Positives = 232/505 (45%), Gaps = 72/505 (14%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND----------------- 161
           L+  Y +       RRVFD     N+ ++ +LLS  A  ++ D                 
Sbjct: 47  LLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSY 106

Query: 162 --------------RVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
                         R + L+H +   G  ++P+  T S ++   +  G  A   Q H  +
Sbjct: 107 NAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQI 166

Query: 206 IKNGGEVVTSVCNALISMY-------------------------------LKSKMVRDAR 234
           ++ G  V   V + L+ MY                               L+ KMV +AR
Sbjct: 167 LRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEAR 226

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            +F+ M DRD ITW +MV G+  N L  +A   F  M   G  + + TF S++  C    
Sbjct: 227 RLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALS 286

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            L   +Q+H+ +++   D +  + + L+  YSKC  ++ A   F  M   K+++SWTA+I
Sbjct: 287 ALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRM-SCKNIISWTALI 345

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE 410
            G+ QNG  + AV  F +M R+G+ P+ FT   ++++   ++      Q H   + +   
Sbjct: 346 VGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 405

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
              +V  AL+  Y K G +++A ++F+ +   D V+W+A++ GYAQ G  +  + ++ ++
Sbjct: 406 HYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKM 465

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKG 529
            ++ VKP+  TF  V++AC+  +  VE+G   FH+      +       + ++ +YS+ G
Sbjct: 466 LAKDVKPDGVTFIGVLSACSR-AGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSG 524

Query: 530 NIESASEVFKRQRKR-DLVSWNSMI 553
            ++ A E  K+     D + W +++
Sbjct: 525 RLKEAEEFIKQMPMHPDAIGWGTLL 549



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 166/336 (49%), Gaps = 1/336 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF+    R+ + +  ++  + ++ L  +ALN F  +R  G+ +   T  S+L  CG L
Sbjct: 226 RRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGAL 285

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +++ +  +V V ++LVD+Y +  +++     F  M+  N++SWT+L+
Sbjct: 286 SALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALI 345

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY +N  ++  + +F  MQ +GI P+ FT  +V+   A+   +    Q H + + +G  
Sbjct: 346 VGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 405

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V NAL+++Y K   + DA  +FD M   D ++W ++V GY       E  + F  M
Sbjct: 406 HYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKM 465

Query: 272 GLAGAELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
                +    TF+ V+  C+    + +     HS    +GI    +  T ++  YS+ G+
Sbjct: 466 LAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGR 525

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +++A +    M    D + W  ++S     G +++ 
Sbjct: 526 LKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIG 561



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 115/227 (50%), Gaps = 2/227 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  ++ F R   +N + +  L+  Y ++   +EA+ +F  ++R G+     TL SV+ +C
Sbjct: 324 KPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSC 383

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G Q HC  + SG    + VS +LV LY +  ++ED  R+FD+M   + VSWT
Sbjct: 384 ANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWT 443

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           +L++GYA+       ++LF +M  + +KP+  TF  VL   +  G V       H+M   
Sbjct: 444 ALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKD 503

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           +G   +      +I +Y +S  +++A      M    D+I W ++++
Sbjct: 504 HGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 292/828 (35%), Positives = 459/828 (55%), Gaps = 27/828 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR---RLGLPLFGSTLSSVLKTCGC 90
           LFD    R    +N L+  Y       EAL ++  +R     G+   G TL+SVLK  G 
Sbjct: 117 LFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGV 176

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVVSWTS 149
             D   G +VH   VK G  R   V+ +L+ +Y +   ++   RVF+ M++  +V SW S
Sbjct: 177 EGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNS 236

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++SG  +N M  + L+LF  MQ   +  NS+T   VL V  +   +    ++H  ++K+G
Sbjct: 237 MISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSG 296

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            EV    CNAL+ MY K   V  A  VF  ++++D I+WNSM++ YV N L+ EA E  +
Sbjct: 297 SEVNIQ-CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFIS 355

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G +   +  VS+         L   +++H+  +K  +D D  +   LM  Y KC 
Sbjct: 356 EMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCR 415

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E ++ +F  MR +KD +SWT +I+ + Q+     A+  F +  +EG++ +      IL
Sbjct: 416 YIEYSAHVFDRMR-IKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSIL 474

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   +       Q+H + I+ N      V   +++ Y + G +  + K+FE +++KDIV
Sbjct: 475 EACSGLETILLAKQLHCYAIR-NGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIV 533

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W++M+  YA  G    A+ ++ ++ S  V+P+     S++ A    S+ + +GK+ H  
Sbjct: 534 TWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSS-LAKGKEVHGF 592

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            I+   +    + S+LV MYS  G++  A +VF   + +D+V W +MI     HGH K+A
Sbjct: 593 LIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQA 652

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           +++FK M +  +  D ++F+ ++ AC+H+ LV+EG+ Y D+M++ + + P  EHY+C+VD
Sbjct: 653 IDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVD 712

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           L  R+G  E+A + I  MP    + VW ++L ACR              L+ L+P +   
Sbjct: 713 LLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGN 772

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVL+SN++A  G W     VR  +++R ++K+   SWIE+ N  ++F   D SH  + +I
Sbjct: 773 YVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERI 832

Query: 732 YSKLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
             KL E++ RL K+ GY  DT  VL D+ +E K  +L +HSERLAI+FGL+ T  G PL+
Sbjct: 833 NLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLR 892

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           I KNLRVCGDCH   KL+SKL  RDIVVRD NRFHHF  G CSCGD+W
Sbjct: 893 IAKNLRVCGDCHEFTKLVSKLFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 167/560 (29%), Positives = 300/560 (53%), Gaps = 25/560 (4%)

Query: 97  GRQVHCECVKSGF--ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
           G QVH   V +G     D  ++T L+ +Y +   V D R +FD M+   V SW +L+  Y
Sbjct: 77  GVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAY 136

Query: 155 ARNKMNDRVLELFHRMQV---EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             +      L ++  M++    G+ P+  T ++VL     EG      +VH + +K+G +
Sbjct: 137 LSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLD 196

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNN 270
             T V NALI+MY K  ++  A  VF+ M D RD  +WNSM++G + N + ++A + F  
Sbjct: 197 RSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRG 256

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-TGLMVAYSKCG 329
           M  A   +   T V V+++C    +L L R+LH+ +LK+G +   NI+   L+V Y+KCG
Sbjct: 257 MQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEV--NIQCNALLVMYTKCG 314

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +++ A ++F  + E KD +SW +M+S ++QNG    A+ F  +M R G +P+   ++ I+
Sbjct: 315 RVDSALRVFREIDE-KDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPD---HACIV 370

Query: 390 TAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           +   AV          +VHA+ IK   +    VG  L++ Y+K   ++ +A VF+ +  K
Sbjct: 371 SLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIK 430

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D ++W+ ++  YAQ      A++I+R+   EG+K +     S++ AC+     +   KQ 
Sbjct: 431 DHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLE-TILLAKQL 489

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H  +I+  L + L V + ++ +Y + G +  + ++F+   ++D+V+W SMI  YA  G  
Sbjct: 490 HCYAIRNGLLD-LVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLL 548

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH-HIYPTMEHYS 621
            +AL +F EM+  D++ D +  + ++ A      + +G++    ++  + H+   +   S
Sbjct: 549 NEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI--VS 606

Query: 622 CMVDLYSRAGMLEKAMDIIN 641
            +VD+YS  G L  A+ + N
Sbjct: 607 SLVDMYSGCGSLSGALKVFN 626



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 252/515 (48%), Gaps = 48/515 (9%)

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG------GEVVTSVCNALISMY 224
           Q  G  P    +  VL ++A +  VA  VQVH   +  G      G + T     L+ MY
Sbjct: 50  QTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATK----LLFMY 105

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL---AGAELTRS 281
            K   V DAR +FDGM  R   +WN+++  Y+++    EA   +  M L   +G      
Sbjct: 106 GKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGC 165

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T  SV+K      + R   ++H   +K+G+D    +   L+  Y+KCG ++ A ++F +M
Sbjct: 166 TLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELM 225

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
            + +DV SW +MISG LQNG    A++ F  M R  +  N +T   +L     ++     
Sbjct: 226 HDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLG 285

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            ++HA ++K+  E +     ALL  Y K G +D A +VF  IDEKD ++W++ML+ Y Q 
Sbjct: 286 RELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQN 344

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G    A++   ++   G +P+     S+ +A       +  GK+ HA +IK +L++   V
Sbjct: 345 GLYAEAIEFISEMLRGGFQPDHACIVSLSSA-VGHLGWLLNGKEVHAYAIKQRLDSDTQV 403

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            + L+ MY K   IE ++ VF R R +D +SW ++I  YAQ     +ALE+F+E +++ +
Sbjct: 404 GNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGI 463

Query: 578 EFDGITFIGVITACT----------------HAGLVD--EGQQYFDIMVNEHHIYPTMEH 619
           + D +    ++ AC+                  GL+D     +  DI      +Y +++ 
Sbjct: 464 KVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKM 523

Query: 620 Y-----------SCMVDLYSRAGMLEKAMDIINRM 643
           +           + M++ Y+ +G+L +A+ +   M
Sbjct: 524 FETVEQKDIVTWTSMINCYANSGLLNEALVLFAEM 558



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 136/268 (50%), Gaps = 1/268 (0%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y +    +FDR   ++ + +  ++  Y + S H EAL +F   ++ G+ +    + S+L+
Sbjct: 416 YIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILE 475

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L   +  +Q+HC  +++G   D+ V   ++D+Y     V    ++F+ + + ++V+
Sbjct: 476 ACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVT 534

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WTS+++ YA + + +  L LF  MQ   ++P+S    ++LG +     +A   +VH  +I
Sbjct: 535 WTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLI 594

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           +    +  ++ ++L+ MY     +  A  VF+ ++ +D + W +M+     +    +A +
Sbjct: 595 RRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAID 654

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTK 294
            F  M   G      +F++++  C+ +K
Sbjct: 655 LFKRMLQTGVTPDHVSFLALLYACSHSK 682


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 279/780 (35%), Positives = 444/780 (56%), Gaps = 25/780 (3%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL SVL+ C        G++V      +GF  D N+ + L  +Y    ++++  RVFD++
Sbjct: 96  TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
                + W  L++  A++      + LF +M   G++ +S+TFS V    +    V    
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  ++K+G     SV N+L++ YLK++ V  AR VFD M +RD I+WNS++ GYV+N 
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  +    F  M ++G E+  +T VSV   CA ++ + L R +HS  +K     +     
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            L+  YSKCG ++ A  +F   REM D  VVS+T+MI+G+ + G    AV  F +M  EG
Sbjct: 336 TLLDMYSKCGDLDSAKAVF---REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           + P+ +T + +L             +VH  I + +      V  AL++ Y K G + EA 
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAP 492
            VF  +  KDI++W+ ++ GY++      A+ ++  L  E    P+E T + V+ AC + 
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           SA  ++G++ H   ++    +   V+++LV MY+K G +  A  +F     +DLVSW  M
Sbjct: 513 SA-FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I GY  HG  K+A+ +F +MR+  +E D I+F+ ++ AC+H+GLVDEG ++F+IM +E  
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 631

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----------- 661
           I PT+EHY+C+VD+ +R G L KA   I  MP    AT+W  +L  CR+           
Sbjct: 632 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 691

Query: 662 ---ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
                L+P ++  YVL++N+YA    W++  R+RK +  R ++K  G SWIE+K +   F
Sbjct: 692 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 751

Query: 719 LAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAF 778
           +AGD S+P++  I + L ++  R+ + GY P T Y L D ++  KE  L  HSE+LA+A 
Sbjct: 752 VAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMAL 811

Query: 779 GLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G++++  G  +++ KNLRVCGDCH + K +SKL RR+IV+RD+NRFH FK+G CSC  +W
Sbjct: 812 GIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 163/551 (29%), Positives = 281/551 (50%), Gaps = 17/551 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+   +FD       + +N L+ E  +      ++ LF  +   G+ +   T S V K+ 
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSF 205

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G Q+H   +KSGF    +V  SLV  Y++   V+  R+VFD+M E +V+SW 
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S+++GY  N + ++ L +F +M V GI+ +  T  +V    AD  +++    VH++ +K 
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                   CN L+ MY K   +  A+AVF  M DR  +++ SM+AGY    L  EA + F
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G      T  +V+  CA  + L   +++H  + +N + FD  +   LM  Y+KC
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSI 387
           G M++A  +FS MR +KD++SW  +I G+ +N   + A++ F  +  E    P+  T + 
Sbjct: 446 GSMQEAELVFSEMR-VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L A  ++S F    ++H +I++  Y     V  +L++ Y K G L  A  +F+ I  KD
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF- 502
           +V+W+ M+AGY   G  + A+ ++ Q+   G++ +E +F S++ AC+  S  V++G +F 
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS-HSGLVDEGWRFF 623

Query: 503 ----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYA 557
               H C I+  + +  C+    V M ++ G++  A    +      D   W +++CG  
Sbjct: 624 NIMRHECKIEPTVEHYACI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679

Query: 558 QHGHTKKALEV 568
            H   K A +V
Sbjct: 680 IHHDVKLAEKV 690


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/726 (37%), Positives = 420/726 (57%), Gaps = 29/726 (3%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M + NVVSW SL+SGY +      V+ LF   ++  ++ + FTFS  L V      +   
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             +H ++  +G      + N+LI MY K   +  AR VF+  ++ DS++WNS++AGYV  
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT--TKELRLARQLHSQVLKNGIDFDHN 316
             + E       M   G  L      S +K C +  +  +   + LH   +K G+D D  
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI-----DLAVNFFC 371
           + T L+  Y+K G +EDA+KIF +M +  +VV + AMI+G LQ   +     + A+  F 
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           +M   G++P+ FT+S IL A   +  F    Q+HA I K N +    +G AL+  Y   G
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +++  K F    + D+V+W++++ G+ Q G  EG + ++ +L   G KP+EFT S +++
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           AC A  AAV+ G+Q HA +IK  + N   + ++ + MY+K G+I+SA+  FK  +  D+V
Sbjct: 360 AC-ANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIV 418

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SW+ MI   AQHG  K+A+++F+ M+   +  + ITF+GV+ AC+H GLV+EG +YF+IM
Sbjct: 419 SWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIM 478

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC-------- 659
             +H I P ++H +C+VDL  RAG L +A   I    F     +WR++L+AC        
Sbjct: 479 KKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDT 538

Query: 660 ------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKN 713
                 R+I L+P  +A YVLL N+Y   G       +R LM DR VKKE G SWIEV N
Sbjct: 539 GKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGN 598

Query: 714 KTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE-AILSQHSE 772
             +SF+AGD SHP S  IY +LEE+   +K   Y  D   V    + +HK+ +++S HSE
Sbjct: 599 VVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDY-IDEKLVSDASEPKHKDNSMVSYHSE 657

Query: 773 RLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLC 832
           +LA+ FG+++ P  AP++++KNLR C  CH  +KL S+LE R+I++RD  RFH F++G C
Sbjct: 658 KLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSC 717

Query: 833 SCGDYW 838
           SCGDYW
Sbjct: 718 SCGDYW 723



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 162/554 (29%), Positives = 266/554 (48%), Gaps = 17/554 (3%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P+RN V +N L+  Y +   + E +NLF   R   L L   T S+ L  CG   D   GR
Sbjct: 2   PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 61

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
            +H     SG    V ++ SL+D+Y +   ++  R VF+  +E + VSW SL++GY R  
Sbjct: 62  LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 121

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD--EGIVATAVQVHTMVIKNGGEVVTSV 216
            ND +L L  +M   G+  NS+   + L          +     +H   +K G ++   V
Sbjct: 122 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVV 181

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-----TNELHMEAFETFNNM 271
             AL+  Y K   + DA  +F  M D + + +N+M+AG++      +E   EA   F  M
Sbjct: 182 GTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM 241

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G + +  TF S++K C+T +     +Q+H+Q+ K  +  D  I   L+  YS  G +
Sbjct: 242 QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSI 301

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           ED  K F    ++ DVVSWT++I GH+QNG  +  +  F ++   G +P+ FT SI+L+A
Sbjct: 302 EDGLKCFHSTPKL-DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 360

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              ++      Q+HA+ IKT       +  + +  Y K G +D A   F+     DIV+W
Sbjct: 361 CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           S M++  AQ G  + AV ++  +   G+ PN  TF  V+ AC+      E  + F     
Sbjct: 421 SVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKK 480

Query: 508 KAKLNNALCVSSALVTMYSKKGNI-ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
              +   +  S+ +V +  + G + E+ S +     + D V W S++     H    KA 
Sbjct: 481 DHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH----KAT 536

Query: 567 EVFKEMRRQDLEFD 580
           +  K +  + +E +
Sbjct: 537 DTGKRVAERVIELE 550



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 206/436 (47%), Gaps = 22/436 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+ + + + V +N L+  Y R   + E L L + + R GL L    L S LK CG  F 
Sbjct: 98  VFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFS 157

Query: 94  HVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ +H   VK G   DV V T+L+D Y +  ++ED  ++F  M + NVV + +++
Sbjct: 158 SSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI 217

Query: 152 SGYAR-----NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           +G+ +     ++  +  + LF  MQ  G+KP+ FTFS++L   +         Q+H  + 
Sbjct: 218 AGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIF 277

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K   +    + NAL+ +Y  S  + D    F      D ++W S++ G+V N        
Sbjct: 278 KYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLT 337

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ +  +G +    T   ++  CA    ++   Q+H+  +K GI     I+   +  Y+
Sbjct: 338 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 397

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG ++ A+  F   +   D+VSW+ MIS + Q+G    AV+ F  M   G+ PN  T+ 
Sbjct: 398 KCGDIDSANMTFKETKN-PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFL 456

Query: 387 IILTA-------QPAVSPFQVHA--HIIKTNYEKSFSVGTALLNAYVKKGILDEAAK-VF 436
            +L A       +  +  F++    H I  N + S      +++   + G L EA   + 
Sbjct: 457 GVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHS----ACIVDLLGRAGRLAEAESFIM 512

Query: 437 ELIDEKDIVAWSAMLA 452
           +   E D V W ++L+
Sbjct: 513 DSGFEGDPVMWRSLLS 528



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 155/350 (44%), Gaps = 32/350 (9%)

Query: 34  LFDRSPQRNFVEYNRLL-----FEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +F   P  N V YN ++      E   D    EA+ LF  ++  G+     T SS+LK C
Sbjct: 201 IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKAC 260

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G+Q+H +  K     D  +  +LV+LY  + ++EDG + F    + +VVSWT
Sbjct: 261 STIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWT 320

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           SL+ G+ +N   +  L LFH +   G KP+ FT S +L   A+   V +  Q+H   IK 
Sbjct: 321 SLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKT 380

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    T + N+ I MY K   +  A   F   ++ D ++W+ M++    +    EA + F
Sbjct: 381 GIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLF 440

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNIRTGLM 322
             M  +G      TF+ V+  C+           H  +++ G+ +      DH I     
Sbjct: 441 ELMKGSGIAPNHITFLGVLVACS-----------HGGLVEEGLRYFEIMKKDHGITPN-- 487

Query: 323 VAYSKC--------GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           V +S C        G++ +A           D V W +++S    + A D
Sbjct: 488 VKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATD 537


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 278/826 (33%), Positives = 444/826 (53%), Gaps = 46/826 (5%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            + +F+  P RN V +  L+  Y      +E ++++                         
Sbjct: 229  RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK------------------------ 264

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             D   GRQ+  + VKSG    + V  SL+ +     NV+    +FD M+E + +SW S+ 
Sbjct: 265  -DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 323

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            + YA+N   +    +F  M+    + NS T ST+L VL           +H +V+K G +
Sbjct: 324  AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 383

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             V  VCN L+ MY  +    +A  VF  M  +D I+WNS++A +V +   ++A     +M
Sbjct: 384  SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 443

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              +G  +   TF S +  C T       R LH  V+ +G+ ++  I   L+  Y K G+M
Sbjct: 444  ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 503

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             ++ ++   M   +DVV+W A+I G+ ++   D A+  F  M  EGV  N  T   +L+A
Sbjct: 504  SESRRVLLQMPR-RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 562

Query: 392  QPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
                         +HA+I+   +E    V  +L+  Y K G L  +  +F  +D ++I+ 
Sbjct: 563  CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIIT 622

Query: 447  WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            W+AMLA  A  G  E  +K+  ++ S GV  ++F+FS  ++A  A  A +E+G+Q H  +
Sbjct: 623  WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA-AAKLAVLEEGQQLHGLA 681

Query: 507  IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            +K    +   + +A   MYSK G I    ++      R L SWN +I    +HG+ ++  
Sbjct: 682  VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 741

Query: 567  EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
              F EM    ++   +TF+ ++TAC+H GLVD+G  Y+D++  +  + P +EH  C++DL
Sbjct: 742  ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 801

Query: 627  YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
              R+G L +A   I++MP   +  VWR++LA+C+              L  L+P D ++Y
Sbjct: 802  LGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY 861

Query: 673  VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
            VL SNM+A TG W++   VRK M  + +KK+   SW+++K+K  SF  GD +HPQ+ +IY
Sbjct: 862  VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIY 921

Query: 733  SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
            +KLE++   +K++GY  DTS  LQD D+E KE  L  HSERLA+A+ L++TP G+ ++I 
Sbjct: 922  AKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIF 981

Query: 793  KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLR+C DCH+V K +S++  R IV+RD  RFHHF+ GLCSC DYW
Sbjct: 982  KNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 180/642 (28%), Positives = 322/642 (50%), Gaps = 47/642 (7%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LFD  P RN V +N ++    R  L+ E +  F  +  LG+      ++S++  C
Sbjct: 124 KPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTAC 183

Query: 89  ---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
              G +F    G QVH    KSG   DV VST+++ LY     V   R+VF++M + NVV
Sbjct: 184 GRSGSMFRE--GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVV 241

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SWTSL+ GY+     + V++++                       DE +     Q+   V
Sbjct: 242 SWTSLMVGYSDKGEPEEVIDIY----------------------KDESL---GRQIIGQV 276

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K+G E   +V N+LISM      V  A  +FD M +RD+I+WNS+ A Y  N    E+F
Sbjct: 277 VKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESF 336

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F+ M     E+  +T  +++ +       +  R +H  V+K G D    +   L+  Y
Sbjct: 337 RIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 396

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           +  G+  +A+ +F  M   KD++SW ++++  + +G    A+   C M   G   N  T+
Sbjct: 397 AGAGRSVEANLVFKQM-PTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 455

Query: 386 SIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           +  L A      F+    +H  ++ +    +  +G AL++ Y K G + E+ +V   +  
Sbjct: 456 TSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 515

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+VAW+A++ GYA+  D + A+  ++ +  EGV  N  T  SV++AC  P   +E+GK 
Sbjct: 516 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 575

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            HA  + A   +   V ++L+TMY+K G++ S+ ++F     R++++WN+M+   A HGH
Sbjct: 576 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 635

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTME 618
            ++ L++  +MR   +  D  +F   ++A     +++EGQQ   + V    EH  +    
Sbjct: 636 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI--- 692

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATV--WRTVLAA 658
            ++   D+YS+ G +    +++  +P + + ++  W  +++A
Sbjct: 693 -FNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISA 730



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 275/569 (48%), Gaps = 37/569 (6%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR VH  CVK      V  + +L+++Y +   V+  R +FD M   N VSW +++SG  R
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG-IVATAVQVHTMVIKNGGEVVTS 215
             +    +E F +M   GIKP+SF  ++++      G +    VQVH  V K+G      
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V  A++ +Y    +V  +R VF+ M DR+ ++W S++ GY       E  + +       
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY------- 263

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                             K+  L RQ+  QV+K+G++    +   L+      G ++ A+
Sbjct: 264 ------------------KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            IF  M E +D +SW ++ + + QNG I+ +   F  M R     N  T S +L+    V
Sbjct: 306 YIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 364

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              +    +H  ++K  ++    V   LL  Y   G   EA  VF+ +  KD+++W++++
Sbjct: 365 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 424

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           A +   G +  A+ +   + S G   N  TF+S + AC  P    E+G+  H   + + L
Sbjct: 425 ASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD-FFEKGRILHGLVVVSGL 483

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                + +ALV+MY K G +  +  V  +  +RD+V+WN++I GYA+     KAL  F+ 
Sbjct: 484 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 543

Query: 572 MRRQDLEFDGITFIGVITACTHAG-LVDEGQQYFDIMVNEHHIYPTMEHY-SCMVDLYSR 629
           MR + +  + IT + V++AC   G L++ G+     +V+    + + EH  + ++ +Y++
Sbjct: 544 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG--FESDEHVKNSLITMYAK 601

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G L  + D+ N +    +   W  +LAA
Sbjct: 602 CGDLSSSQDLFNGLD-NRNIITWNAMLAA 629



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 216/454 (47%), Gaps = 29/454 (6%)

Query: 194 IVATAVQVHTMVIKNGGEVVTSV--CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
           I  T   VH + +K  G V  SV   N LI+MY K   V+ AR +FD M  R+ ++WN+M
Sbjct: 87  IETTGRAVHALCVK--GLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTM 144

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNG 310
           ++G V   L++E  E F  M   G + +     S++  C  +  + R   Q+H  V K+G
Sbjct: 145 MSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSG 204

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           +  D  + T ++  Y   G +  + K+F  M + ++VVSWT+++ G+   G  +  ++ +
Sbjct: 205 LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIY 263

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
                                +      Q+   ++K+  E   +V  +L++     G +D
Sbjct: 264 ---------------------KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 302

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            A  +F+ + E+D ++W+++ A YAQ G  E + +I+  +     + N  T S++++   
Sbjct: 303 YANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 362

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
                 + G+  H   +K   ++ +CV + L+ MY+  G    A+ VFK+   +DL+SWN
Sbjct: 363 HVDHQ-KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 421

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           S++  +   G +  AL +   M       + +TF   + AC      ++G+    ++V  
Sbjct: 422 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 481

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
              Y  +   + +V +Y + G + ++  ++ +MP
Sbjct: 482 GLFYNQIIG-NALVSMYGKIGEMSESRRVLLQMP 514


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 289/838 (34%), Positives = 460/838 (54%), Gaps = 37/838 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGC 90
           +S+FD   ++N  ++N ++  Y R+ L+   L +F+  I   GL     T   V+K C  
Sbjct: 137 RSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAG 196

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           + +   G  VH   VK+    DV VS +LV  Y    +V D  RVF  M E N+VSW S+
Sbjct: 197 VSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSM 256

Query: 151 LSGYARNKMNDRVLELFHRMQVE----GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           +  ++ N +++    L  +M  +       P+  T +TVL V A +  +     VH + +
Sbjct: 257 IRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAM 316

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY-VTNELHMEAF 265
           K   +    V NAL+ MY K   + DA+ +F    +++ ++WN+MV G+    ++H + F
Sbjct: 317 KLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIH-KTF 375

Query: 266 ETFNNMGLAGAEL--TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN---IRTG 320
           +    M   G +L     T ++ + +C     L   ++LH   LK   +F HN   +   
Sbjct: 376 DLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQ--EFVHNNELVANA 433

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
            + +Y+KCG +  A ++F  +R  K V SW A+I G+ Q+    L+++ + QM   G+ P
Sbjct: 434 FVASYAKCGSLSYAHRVFCSIRS-KTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLP 492

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + FT   +L+A   +       +VH  II+   E+   V  +LL+ Y+  G L  A  +F
Sbjct: 493 DLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLF 552

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA-PSAA 495
           + +++K +V+W+ M+ GY Q G  E A+ ++RQ+   GV+P E +  SV  AC+  PS  
Sbjct: 553 DAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPS-- 610

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  G++ H  ++K  L +   ++ +++ MY+K G++  + +VF   ++R + SWN+M+ G
Sbjct: 611 LRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMG 670

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HG  K+A+++F+EM+R     D +TF+GV+TAC H+GLV EG  Y D M     + P
Sbjct: 671 YGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNP 730

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDI-INRMPFAASATVWRTVLAACR-------------- 660
           T++HY+C++D+  RAG L++A+ I    M       +W  +L++CR              
Sbjct: 731 TLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAK 790

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L   +P     YVLLSN+YA +G W E  +VR+ M +  ++K+AG SWIE+  K +SF+A
Sbjct: 791 LFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVA 850

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           G+ S     +I S    L   +   GY+PDTS V  D+ +E K   L  HSE+LAI +GL
Sbjct: 851 GESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGL 910

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + T  G  L++ KNLR+C DCH   KLISK+  R+IVVRD  RFHHFK G CSCGDYW
Sbjct: 911 IRTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/516 (30%), Positives = 266/516 (51%), Gaps = 21/516 (4%)

Query: 93  DHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           D   GR++H    +S   + D  + T ++ +Y    + +D R VFD + + N+  W +++
Sbjct: 96  DIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVI 155

Query: 152 SGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           S Y+RN++   VLE+F +M  E G+ P++FTF  V+   A    V   + VH +V+K   
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V NAL+S Y  +  V DA  VF  M +R+ ++WNSM+  +  N L  E F     
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275

Query: 271 MGLAGAELT----RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           M     E+      +T  +V+ +CA  +E+ + + +H   +K  +D +  +   LM  YS
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYS 335

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFT 384
           KCG + DA  IF  +   K+VVSW  M+ G    G I    +   QM   G  +R +  T
Sbjct: 336 KCGCINDAQVIFK-LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVT 394

Query: 385 YSIILTAQP-----AVSPF--QVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVF 436
              IL A P     +V P   ++H + +K  +   +  V  A + +Y K G L  A +VF
Sbjct: 395 ---ILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVF 451

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             I  K + +W+A++ GY+Q  D   ++  Y Q+ S G+ P+ FT  S+++AC+    ++
Sbjct: 452 CSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIK-SL 510

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           + GK+ H   I+ +L     V  +L+++Y   G + +A  +F     + LVSWN+M+ GY
Sbjct: 511 KLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGY 570

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            Q+G  ++AL +F++M    ++   I+ + V  AC+
Sbjct: 571 LQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 288/806 (35%), Positives = 450/806 (55%), Gaps = 50/806 (6%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR--DVNVSTSLVDLYMRTNNVEDGRRVFD 137
              +VLK    + +   G+Q+H    K G+     V +  +LV++Y +   + D  +VFD
Sbjct: 12  AFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFD 71

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF-STVLGV--LADEGI 194
            + E + VSW S++S   R +  +  ++ F  M +EG +P+SFT  S  L    L     
Sbjct: 72  RITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDG 131

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +    Q+H    + G    T   NAL++MY K   + DA+++    EDRD +TWNSM++ 
Sbjct: 132 LWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISS 190

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           +  NE  MEA      M L G +    TF SV+  C+    LR  +++H+  L+     +
Sbjct: 191 FSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIE 250

Query: 315 HN-IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           ++ + + L+  Y  CG++E    +F  + + K +  W AMI+G+ Q+   + A+  F +M
Sbjct: 251 NSFVGSALVDMYCNCGQVESGRLVFDSVLDRK-IGLWNAMIAGYAQSEHDEKALMLFIEM 309

Query: 374 -TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
               G+  N  T S I+ A            +H ++IK   E +  +  AL++ Y + G 
Sbjct: 310 EAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGD 369

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV-------KIYRQLTSEG------- 474
           +  + ++F+ ++++DIV+W+ ++  Y   G +  A+       +I  + T +G       
Sbjct: 370 IKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQ 429

Query: 475 --VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
              KPN  T  +V+  C + SA + +GK+ HA +I+  L + + V SALV MY+K G + 
Sbjct: 430 VPFKPNSITLMTVLPGCASLSA-LAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLN 488

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM-----RRQDLEFDGITFIGV 587
            A  VF +   R++++WN +I  Y  HG  K++LE+F++M     +  +++   +TFI +
Sbjct: 489 LARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIAL 548

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
             +C+H+G+VDEG   F  M NEH I P  +HY+C+VDL  RAG +E+A  ++N MP   
Sbjct: 549 FASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGF 608

Query: 648 SAT-VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
                W ++L ACR              L+ LQP  ++ YVLLSN+Y++ G W +   +R
Sbjct: 609 DKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLR 668

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           + M    VKKE G SWIE  ++ + FLAGD+SHPQS +++  LE LS RLK  GY PDT+
Sbjct: 669 RRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTA 728

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
            VL DID+E KE IL  HSE+LAIAFG++ TP G  +++ KNLRVC DCHT  K ISK+E
Sbjct: 729 CVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIE 788

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R+I++RD  RFHHFK+G CSCGDYW
Sbjct: 789 DREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 259/518 (50%), Gaps = 44/518 (8%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC--NALISMYLKSKMVR 231
           G  P++F F  VL  +A    +    Q+H  V K G    +SV   N L++MY K   + 
Sbjct: 5   GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           DA  VFD + +RD ++WNS+++     E    A + F  M + G E +  T VS+   C+
Sbjct: 65  DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACS 124

Query: 292 TTKE---LRLARQLHSQVLKNG--IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
             ++   L L +Q+H    + G    F +N    LM  Y+K G+++DA  +  +  E +D
Sbjct: 125 NLRKRDGLWLGKQIHGCCFRKGHWRTFSNN---ALMAMYAKLGRLDDAKSLLVLF-EDRD 180

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------Q 399
           +V+W +MIS   QN     A+ F   M  EGV+P+G T++ +L   PA S         +
Sbjct: 181 LVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVL---PACSHLDLLRTGKE 237

Query: 400 VHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           +HA+ ++T+   E SF VG+AL++ Y   G ++    VF+ + ++ I  W+AM+AGYAQ 
Sbjct: 238 IHAYALRTDDVIENSF-VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQS 296

Query: 458 GDTEGAVKIYRQL-TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
              E A+ ++ ++  + G+  N  T SS++ A       + + +  H   IK  L     
Sbjct: 297 EHDEKALMLFIEMEAAAGLYSNATTMSSIVPA-YVRCEGISRKEGIHGYVIKRGLETNRY 355

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-- 574
           + +AL+ MYS+ G+I+++  +F     RD+VSWN++I  Y   G +  AL +  EM+R  
Sbjct: 356 LQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIE 415

Query: 575 QDLEFDG--------------ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
           +   +DG              IT + V+  C     + +G++     +  + +   +   
Sbjct: 416 EKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAI-RNLLASQVTVG 474

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           S +VD+Y++ G L  A  + ++MP     T W  ++ A
Sbjct: 475 SALVDMYAKCGCLNLARRVFDQMPIRNVIT-WNVIIMA 511



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 186/378 (49%), Gaps = 26/378 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGC 90
           +SL      R+ V +N ++  + ++    EAL +FL +  L G+   G T +SVL  C  
Sbjct: 170 KSLLVLFEDRDLVTWNSMISSFSQNERFMEAL-MFLRLMVLEGVKPDGVTFASVLPACSH 228

Query: 91  LFDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           L     G+++H   +++     +  V ++LVD+Y     VE GR VFD + +  +  W +
Sbjct: 229 LDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNA 288

Query: 150 LLSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++GYA+++ +++ L LF  M+   G+  N+ T S+++        ++    +H  VIK 
Sbjct: 289 MIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR 348

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G E    + NALI MY +   ++ ++ +FD MEDRD ++WN+++  YV      +A    
Sbjct: 349 GLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLL 408

Query: 269 NNMGLAGAELTRS----------------TFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           + M     + T                  T ++V+  CA+   L   +++H+  ++N + 
Sbjct: 409 HEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLA 468

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
               + + L+  Y+KCG +  A ++F  M  +++V++W  +I  +  +G    ++  F  
Sbjct: 469 SQVTVGSALVDMYAKCGCLNLARRVFDQM-PIRNVITWNVIIMAYGMHGKGKESLELFED 527

Query: 373 MTREG-----VRPNGFTY 385
           M  EG     V+P   T+
Sbjct: 528 MVAEGAKGGEVKPTEVTF 545



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 24/249 (9%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL--------------GL 74
           K  + +FD    R+ V +N ++  Y       +AL L   ++R+               +
Sbjct: 371 KTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQV 430

Query: 75  PLFGS--TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG 132
           P   +  TL +VL  C  L     G+++H   +++  A  V V ++LVD+Y +   +   
Sbjct: 431 PFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLA 490

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-----IKPNSFTFSTVLG 187
           RRVFD M   NV++W  ++  Y  +      LELF  M  EG     +KP   TF  +  
Sbjct: 491 RRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFA 550

Query: 188 VLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DS 245
             +  G+V   + + H M  ++G E        ++ +  ++  V +A  + + M    D 
Sbjct: 551 SCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDK 610

Query: 246 I-TWNSMVA 253
           +  W+S++ 
Sbjct: 611 VGAWSSLLG 619


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 258/671 (38%), Positives = 413/671 (61%), Gaps = 52/671 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGA 276
           N ++S+Y K  ++   + +F+ M  RD ++WN  ++GY       +A   +  M   A  
Sbjct: 75  NTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK--------- 327
            L R TF +++ LC+  + + L RQ++ Q+LK G   D  + + L+  Y+K         
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194

Query: 328 ----------------------CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
                                 CG +E++ ++F  ++E +D +SWT MI+G +QNG    
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKE-RDSISWTIMITGLMQNGLERE 253

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLN 421
           A++ F +M   G   + FT+  +LTA  ++       Q+HA++I+T+++ +  VG+AL++
Sbjct: 254 ALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVD 313

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            Y K   +  A  VF+ + +K++++W+AML GY Q G +E AVKI+ ++   GV+P++FT
Sbjct: 314 MYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFT 373

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
             SVI++C A  A++E+G QFH  ++ + L + + VS+AL+T+Y K G+ E++  +F   
Sbjct: 374 LGSVISSC-ANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEM 432

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
             RD VSW +++ GYAQ G   + + +F+ M    L+ DG+TFIGV++AC+ AGLV++G 
Sbjct: 433 NIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGL 492

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
           QYF+ M+ EH I P ++H +C++DL  RAG LE+A + IN MP       W T+L++CR 
Sbjct: 493 QYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRV 552

Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                        LI+L+P + A YVLLS++YA+ G W + A++R+ M D++V+KE GYS
Sbjct: 553 HGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYS 612

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           WI+ K K + F A D S P   QIY++LE+L+ ++ + GY PD S VL D+++  K  +L
Sbjct: 613 WIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKML 672

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
           + HSE+LAIAFGL+  P G P++++KNLRVCGDCH   K ISK+ +R+I+VRD  RFH F
Sbjct: 673 NHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLF 732

Query: 828 KEGLCSCGDYW 838
           K+G CSCGD+W
Sbjct: 733 KDGTCSCGDFW 743



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 218/472 (46%), Gaps = 47/472 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGC 90
           Q +F+  P R+ V +N  +  Y       +A+ ++ L ++   + L   T S++L  C  
Sbjct: 91  QQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSK 150

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV----- 145
                 GRQ++ + +K GF  DV V + LVD+Y +   + D +R FD+M E NVV     
Sbjct: 151 FRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTM 210

Query: 146 --------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
                                     SWT +++G  +N +    L++F  M++ G   + 
Sbjct: 211 ITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQ 270

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           FTF +VL        +    Q+H  VI+   +    V +AL+ MY K + ++ A  VF  
Sbjct: 271 FTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKR 330

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  ++ I+W +M+ GY  N    EA + F  M   G E    T  SVI  CA    L   
Sbjct: 331 MPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEG 390

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            Q H + L +G+     +   L+  Y KCG  E++ ++F+ M  ++D VSWTA+++G+ Q
Sbjct: 391 AQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEM-NIRDEVSWTALLAGYAQ 449

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQ--VHAHIIKTNYE 410
            G  +  +  F +M   G++P+G T+  +L+A       +  +  F+  +  H I    +
Sbjct: 450 FGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVD 509

Query: 411 KSFSVGTALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
                 T +++   + G L+EA   +  +    D+V W+ +L+     GD E
Sbjct: 510 HC----TCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDME 557



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 170/341 (49%), Gaps = 5/341 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ Q LF    +R+ + +  ++    ++ L +EAL++F  +R  G  +   T  SVL  C
Sbjct: 221 EESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTAC 280

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L     G+Q+H   +++    +V V ++LVD+Y +  +++    VF  M + NV+SWT
Sbjct: 281 GSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWT 340

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++L GY +N  ++  +++F  MQ  G++P+ FT  +V+   A+   +    Q H   + +
Sbjct: 341 AMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVS 400

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G     +V NALI++Y K     ++  +F  M  RD ++W +++AGY       E    F
Sbjct: 401 GLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLF 460

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGI--DFDHNIRTGLMVAY 325
             M   G +    TF+ V+  C+    +    Q   S + ++GI    DH   T ++   
Sbjct: 461 ERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHC--TCIIDLL 518

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            + G++E+A    + M    DVV W  ++S    +G +++ 
Sbjct: 519 GRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIG 559



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 34/311 (10%)

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
           A    C + +   +P  F  + ++TA   +       H+     + +      +L+ Y K
Sbjct: 24  AKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSK 83

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR-QLTSEGVKPNEFTFSS 484
            G+L +  ++F L+  +D V+W+  ++GYA  G    AV++Y+  L    +  N  TFS+
Sbjct: 84  LGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFST 143

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK---------------- 528
           ++  C+     V+ G+Q +   +K    + + V S LV MY+K                 
Sbjct: 144 MLILCSK-FRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPER 202

Query: 529 ---------------GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
                          G IE +  +F   ++RD +SW  MI G  Q+G  ++AL++F+EMR
Sbjct: 203 NVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMR 262

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
                 D  TF  V+TAC     + EG+Q    ++   H    +   S +VD+YS+   +
Sbjct: 263 LAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDH-KDNVFVGSALVDMYSKCRSI 321

Query: 634 EKAMDIINRMP 644
           + A  +  RMP
Sbjct: 322 KSAETVFKRMP 332


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 273/710 (38%), Positives = 420/710 (59%), Gaps = 55/710 (7%)

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           ++  +T+L   A  G++  A +V   +   G  +VT   N+L+S   ++ +VRD   +F 
Sbjct: 46  TYLLNTLLTAYASSGLLPHARRVFDAM--PGRNLVTG--NSLLSALARAGLVRDMERLFT 101

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNM--GLAGAELTRSTFVSVIKLCATTKEL 296
            +  RD++++N+++AG+     H  A   +  +    AG   +R T   V+ + +   + 
Sbjct: 102 SLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDR 161

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR-------------- 342
            L RQ+H Q+L+ G        + L+  Y+K G + DA ++F  M               
Sbjct: 162 ALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGL 221

Query: 343 ----------------EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
                           E +D ++WT M++G  QNG    A++ F +M  EGV  + +T+ 
Sbjct: 222 LRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFG 281

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            ILTA  A++      Q+HA+I +T YE +  VG+AL++ Y K   +  A  VF  +  K
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWK 341

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           +I++W+AM+ GY Q G  E AV+++ ++  +G+KP++FT  SVI++C A  A++E+G QF
Sbjct: 342 NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSC-ANLASLEEGAQF 400

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H  ++ + L   + VS+ALVT+Y K G+IE A  +F      D VSW +++ GYAQ G  
Sbjct: 401 HCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKA 460

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           K+ +++F++M  + ++ DG+TFIGV++AC+ +GLVD+G+ YF  M  +H I P  +HY+C
Sbjct: 461 KETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTC 520

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHD 668
           M+DLYSR+G L++A + I +MP    A  W T+L+ACRL              + L P +
Sbjct: 521 MIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQN 580

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
            A YVLL +M+A+ G W + A++R+ M DR+VKKE G SWI+ KNK + F A D SHP S
Sbjct: 581 PASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFS 640

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
             IY KL+ L++++ + GYKPD S VL D+ D  K  +LS HSE+LAIAFGL+  P   P
Sbjct: 641 RTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMP 700

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++IVKNLRVC DCH   K ISK+  RDI+VRD  RFH F  G+CSCGD+W
Sbjct: 701 IRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 245/484 (50%), Gaps = 43/484 (8%)

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
            R++    SL+    R   V D  R+F  + + + VS+ +LL+G++R   + R    +  
Sbjct: 74  GRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVA 133

Query: 170 MQVE--GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG------------------ 209
           +  +  G++P+  T S V+ V +  G  A   QVH  +++ G                  
Sbjct: 134 LLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKV 193

Query: 210 --------------GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
                         G+ V  +CN +I+  L+ KMV +ARA+F+ +E+RDSITW +MV G 
Sbjct: 194 GPIGDARRVFDEMEGKNVV-MCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGL 252

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
             N L  EA + F  M   G  + + TF S++  C     L   +Q+H+ + +   + + 
Sbjct: 253 TQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNV 312

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  YSKC  +  A  +F  M   K+++SWTAMI G+ QNG  + AV  F +M R
Sbjct: 313 FVGSALVDMYSKCRSVRLAEAVFRRMM-WKNIISWTAMIVGYGQNGCGEEAVRVFSEMQR 371

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           +G++P+ FT   ++++   ++      Q H   + +      +V  AL+  Y K G +++
Sbjct: 372 DGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIED 431

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A ++F+ +   D V+W+A++ GYAQ G  +  + ++ ++ S+GVKP+  TF  V++AC+ 
Sbjct: 432 AHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSR 491

Query: 492 PSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSW 549
            S  V++G+  FH+      +       + ++ +YS+ G ++ A E  K+  R  D   W
Sbjct: 492 -SGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGW 550

Query: 550 NSMI 553
            +++
Sbjct: 551 ATLL 554



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 217/469 (46%), Gaps = 40/469 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR--LGLPLFGSTLSSVLKTCG 89
           + LF   PQR+ V YN LL  + R   H  A   ++ + R   G+     T+S V+    
Sbjct: 97  ERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVAS 156

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV---- 145
            L D   GRQVHC+ ++ GF       + LVD+Y +   + D RRVFD+M   NVV    
Sbjct: 157 ALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNT 216

Query: 146 ---------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
                                      +WT++++G  +N +    L++F RM+ EG+  +
Sbjct: 217 MITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGID 276

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
            +TF ++L        +    Q+H  + +   E    V +AL+ MY K + VR A AVF 
Sbjct: 277 QYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFR 336

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M  ++ I+W +M+ GY  N    EA   F+ M   G +    T  SVI  CA    L  
Sbjct: 337 RMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEE 396

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             Q H   L +G+     +   L+  Y KCG +EDA ++F  M    D VSWTA++ G+ 
Sbjct: 397 GAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVMGYA 455

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYE--KSF 413
           Q G     ++ F +M  +GV+P+G T+  +L+A      V   + + H ++ +++     
Sbjct: 456 QFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLD 515

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTE 461
              T +++ Y + G L +A +  + +    D   W+ +L+     GD E
Sbjct: 516 DHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDME 564



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 164/336 (48%), Gaps = 1/336 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++LF+   +R+ + +  ++    ++ L  EAL++F  +R  G+ +   T  S+L  CG L
Sbjct: 231 RALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGAL 290

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H    ++ +  +V V ++LVD+Y +  +V     VF  M   N++SWT+++
Sbjct: 291 AALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMI 350

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY +N   +  + +F  MQ +GIKP+ FT  +V+   A+   +    Q H + + +G  
Sbjct: 351 VGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLR 410

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V NAL+++Y K   + DA  +FD M   D ++W ++V GY       E  + F  M
Sbjct: 411 PYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKM 470

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
              G +    TF+ V+  C+ +  +   R   HS    + I    +  T ++  YS+ G 
Sbjct: 471 LSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGW 530

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           ++ A +    M    D   W  ++S     G +++ 
Sbjct: 531 LKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIG 566



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 88/335 (26%)

Query: 400 VHAHIIKTNYEKSFS-VGTALLNAYVKKGILDEAAKVFEL-------------------- 438
           VHA I++T    S + +   LL AY   G+L  A +VF+                     
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 439 -----------IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE--GVKPNEFTFSSV 485
                      + ++D V+++A+LAG+++ G    A   Y  L  +  GV+P+  T S V
Sbjct: 92  LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGV 151

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ---- 541
           +   +A       G+Q H   ++          S LV MY+K G I  A  VF       
Sbjct: 152 VMVASALGDRA-LGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKN 210

Query: 542 ---------------------------RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
                                       +RD ++W +M+ G  Q+G   +AL+VF+ MR 
Sbjct: 211 VVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRA 270

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-------SCMVDLY 627
           + +  D  TF  ++TAC     ++EG+Q         H Y T   Y       S +VD+Y
Sbjct: 271 EGVGIDQYTFGSILTACGALAALEEGKQI--------HAYITRTCYEDNVFVGSALVDMY 322

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRLI 662
           S+   +  A  +  RM       +W+ +++   +I
Sbjct: 323 SKCRSVRLAEAVFRRM-------MWKNIISWTAMI 350


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 284/828 (34%), Positives = 454/828 (54%), Gaps = 24/828 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R    +N ++  Y  +     AL L+  +R  G+PL  S+  ++LK C  L
Sbjct: 136 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 195

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
            D   G ++H   VK G+     +  +LV +Y + +++   RR+FD   E  + V W S+
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           LS Y+ +  +   LELF  M + G  PNS+T  + L             ++H  V+K+  
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315

Query: 211 EVVT-SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 VCNALI+MY +   +  A  +   M + D +TWNS++ GYV N ++ EA E F+
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           +M  AG +    +  S+I        L    +LH+ V+K+G D +  +   L+  YSKC 
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
                 + F  M + KD++SWT +I+G+ QN     A+  F  + ++ +  +      IL
Sbjct: 436 LTCYMGRAFLRMHD-KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   +       ++H HI++     +  +   L++ Y K   +  A +VFE I  KD+V
Sbjct: 495 RASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVV 553

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W++M++  A  G+   AV+++R++   G+  +       I +  A  +A+ +G++ H  
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL-CILSAAASLSALNKGREIHCY 612

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            ++        ++ A+V MY+  G+++SA  VF R  ++ L+ + SMI  Y  HG  K A
Sbjct: 613 LLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAA 672

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           +E+F +MR +++  D I+F+ ++ AC+HAGL+DEG+ +  IM +E+ + P  EHY C+VD
Sbjct: 673 VELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVD 732

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           +  RA  + +A + +  M    +A VW  +LAACR              L+ L+P +   
Sbjct: 733 MLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 792

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
            VL+SN++A  G W +  +VR  M    ++K  G SWIE+  K + F A D SHP+S +I
Sbjct: 793 LVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEI 852

Query: 732 YSKLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           Y KL E++ +L ++ GY  DT +VL ++D+  K  +L  HSER+AIA+GL+ TP  A L+
Sbjct: 853 YEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLR 912

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           I KNLRVC DCHT  KL+SKL RRDIV+RD NRFHHF+ GLCSCGD W
Sbjct: 913 ITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 296/574 (51%), Gaps = 25/574 (4%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVN-VSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           VL+ CG       GRQ+H    K+  + +++ ++  LV +Y +  +++D  +VFD+M + 
Sbjct: 86  VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
              +W +++  Y  N      L L+  M+VEG+     +F  +L   A    + +  ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAGYVTNELH 261
           ++++K G      + NAL+SMY K+  +  AR +FDG +++ D++ WNS+++ Y T+   
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI-DFDHNIRTG 320
           +E  E F  M + G      T VS +  C      +L +++H+ VLK+     +  +   
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y++CGKM  A +I   M    DVV+W ++I G++QN     A+ FF  M   G + 
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNN-ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           +  + + I+ A   +S      ++HA++IK  ++ +  VG  L++ Y K  +     + F
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             + +KD+++W+ ++AGYAQ      A++++R +  + ++ +E    S++ A +   + +
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 504

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
              K+ H   ++  L + + + + LV +Y K  N+  A+ VF+  + +D+VSW SMI   
Sbjct: 505 IV-KEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A +G+  +A+E+F+ M    L  D +  + +++A      +++G+        E H Y  
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGR--------EIHCYLL 614

Query: 617 MEHYS-------CMVDLYSRAGMLEKAMDIINRM 643
            + +         +VD+Y+  G L+ A  + +R+
Sbjct: 615 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 648



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 217/437 (49%), Gaps = 8/437 (1%)

Query: 161 DRVL-ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV-VTSVCN 218
           D VL E F R+ V         F+ VL +      V+   Q+H+ + K      +  +  
Sbjct: 61  DGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG 120

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            L+ MY K   + DA  VFD M DR +  WN+M+  YV+N     A   + NM + G  L
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
             S+F +++K CA  +++R   +LHS ++K G      I   L+  Y+K   +  A ++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-- 396
              +E  D V W +++S +  +G     +  F +M   G  PN +T    LTA    S  
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300

Query: 397 --PFQVHAHIIKTNYEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
               ++HA ++K++   S   V  AL+  Y + G + +A ++   ++  D+V W++++ G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    + A++ +  + + G K +E + +S+I A +   + +  G + HA  IK   ++
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII-AASGRLSNLLAGMELHAYVIKHGWDS 419

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            L V + L+ MYSK          F R   +DL+SW ++I GYAQ+    +ALE+F+++ 
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479

Query: 574 RQDLEFDGITFIGVITA 590
           ++ +E D +    ++ A
Sbjct: 480 KKRMEIDEMILGSILRA 496


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 279/757 (36%), Positives = 423/757 (55%), Gaps = 117/757 (15%)

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME--------------- 241
           TA  VH  VIK+G      + N L+++Y K+     AR +FD M                
Sbjct: 32  TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91

Query: 242 ----------------DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
                            RDS++W +M+ GY     + +A     +M   G E T+ T  +
Sbjct: 92  KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+   A T+ +   +++HS ++K G+  + ++   L+  Y+KCG    A  +F  M  ++
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM-VVR 210

Query: 346 DVVSWTAMISGHLQNGAIDLA-------------------------------VNFFCQMT 374
           D+ SW AMI+ H+Q G +DLA                               ++ F +M 
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270

Query: 375 REGV-RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSV-------------- 415
           R+ +  P+ FT + +L+A   +       Q+H+HI+ T ++ S  V              
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330

Query: 416 -------------------GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
                               TALL+ Y+K G +++A  +F  + ++D+VAW+AM+ GY Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G    A+ ++R +   G +PN +T +++++   +  A++  GKQ H  ++K+    ++ 
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV-ASSLASLSHGKQIHGSAVKSGEIYSVS 449

Query: 517 VSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
           VS+AL+TMY+K GNI SAS  F   R +RD VSW SMI   AQHGH ++ALE+F+ M  +
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            L  D IT++GV +ACTHAGLV++G+QYFD+M +   I PT+ HY+CMVDL+ RAG+L++
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569

Query: 636 AMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAA 681
           A + I +MP       W ++L+ACR              L+ L+P +S  Y  L+N+Y+A
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
            G W+E A++RK M D +VKKE G+SWIEVK+K + F   D +HP+ N+IY  ++++   
Sbjct: 630 CGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDE 689

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +K  GY PDT+ VL D+++E KE IL  HSE+LAIAFGL++TP    L+I+KNLRVC DC
Sbjct: 690 IKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDC 749

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           HT IK ISKL  R+I+VRDT RFHHFK+G CSC DYW
Sbjct: 750 HTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 227/510 (44%), Gaps = 90/510 (17%)

Query: 27  YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           YSK+         FD+ PQR+ V +  ++  Y     + +A+ +   + + G+     TL
Sbjct: 90  YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTL 149

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD---- 137
           ++VL +         G++VH   VK G   +V+VS SL+++Y +  +    + VFD    
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209

Query: 138 ---------------------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
                                       M E ++V+W S++SG+ +   + R L++F +M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269

Query: 171 QVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
             +  + P+ FT ++VL   A+   +    Q+H+ ++  G ++   V NALISMY +   
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329

Query: 230 VRDAR-----------------AVFDG----------------MEDRDSITWNSMVAGYV 256
           V  AR                 A+ DG                ++DRD + W +M+ GY 
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
            +  + EA   F +M   G      T  +++ + ++   L   +Q+H   +K+G  +  +
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +   L+  Y+K G +  AS+ F ++R  +D VSWT+MI    Q+G  + A+  F  M  E
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE------------KSFSVGTALLNAYV 424
           G+RP+  TY  + +A         HA ++    +             + S    +++ + 
Sbjct: 510 GLRPDHITYVGVFSA-------CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562

Query: 425 KKGILDEAAKVFELID-EKDIVAWSAMLAG 453
           + G+L EA +  E +  E D+V W ++L+ 
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 293/856 (34%), Positives = 467/856 (54%), Gaps = 40/856 (4%)

Query: 17  QPPKSLRSPFYSKKD--------QSLFDRSP-----QRNFVEYNRLLFEYCRDSLHQEAL 63
           Q  K LRS    +KD        +++ DR+       R+  + N  L  +C     + A+
Sbjct: 22  QTHKELRSDVRVRKDVIFNRASLRTVSDRADSITTFDRSVTDANTQLRRFCESGNLKNAV 81

Query: 64  NLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY 123
            L     +  +     TL SVL+ C        G++V      +GF  D N+ + L  +Y
Sbjct: 82  KLLHVSGKWDID--PRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMY 139

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
               ++++  RVFD +     + W  L++  A++      + LF +M   G++ +S+TFS
Sbjct: 140 TNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 199

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
            V    +    V    Q+H  ++K+G     SV N+L++ YLK+  V  AR VFD M +R
Sbjct: 200 CVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTER 259

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D I+WNS++ GYV+N L  +    F  M  +G E+  +T VSV   CA ++ + L R +H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVH 319

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM--KDVVSWTAMISGHLQNG 361
              +K     +      L+  YSKCG ++ A  +F   REM  + VVS+T+MI+G+ + G
Sbjct: 320 CFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVF---REMSGRSVVSYTSMIAGYAREG 376

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGT 417
               AV  F +M  EG+ P+ +T + +L             +VH  I + +      V  
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSN 436

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VK 476
           AL++ Y K G + EA  VF  +  KDI++W+ ++ GY++      A+ ++  L  E    
Sbjct: 437 ALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFS 496

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+E T + V+ AC + SA  ++G++ H   ++    +   V+++LV MY+K G +  A  
Sbjct: 497 PDERTVACVLPACASLSA-FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARL 555

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F     +DLVSW  MI GY  HG  K+A+ +F +MR+  +E D I+F+ ++ AC+H+GL
Sbjct: 556 LFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGL 615

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           VDEG ++F+IM +E  I PT+EHY+C+VD+ +R G L KA   I  MP    AT+W  +L
Sbjct: 616 VDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALL 675

Query: 657 AACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
             CR+                L+P ++  YVL++N+YA    W+E  R+RK +  R ++K
Sbjct: 676 CGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRK 735

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
             G SWIE+K +   F+AGD S+P++ +I + L  +  R+ + GY P T Y L D ++  
Sbjct: 736 NPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEME 795

Query: 763 KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
           KE  L  HSE+LA+A G++++  G  +++ KNLRVCGDCH + K +SKL RR+IV+RD+N
Sbjct: 796 KEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSN 855

Query: 823 RFHHFKEGLCSCGDYW 838
           RFH FK+G CSC  +W
Sbjct: 856 RFHQFKDGHCSCRGFW 871


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 290/822 (35%), Positives = 449/822 (54%), Gaps = 32/822 (3%)

Query: 40   QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL-FDHVFGR 98
            + + V +N ++        H +A+ +F  +R  G+     TL ++L        D    R
Sbjct: 296  ELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAAR 355

Query: 99   QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSWTSLLSGYARN 157
              H    +SG+ RDV +  +++ +Y +         VF  +  + +V+SW ++L      
Sbjct: 356  GFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDR 415

Query: 158  KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV-TSV 216
            K   +V+  FH M + GI PN  +F  +L   ++   +    ++H++++    + V +SV
Sbjct: 416  KSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSV 475

Query: 217  CNALISMYLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
               L+SMY K   + +A  VF  M    R  +TWN M+  Y  N+   EAF     M   
Sbjct: 476  ATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQG 535

Query: 275  GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
            G      +F SV+  C  ++E ++ R     +L++G      + T L+  + +C ++E A
Sbjct: 536  GVLPDALSFTSVLSSCYCSQEAQVLRMC---ILESGYR-SACLETALISMHGRCRELEQA 591

Query: 335  SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
              +F+ M +  DVVSWTAM+S   +N       N F +M  EGV P+ FT +  L    A
Sbjct: 592  RSVFNEM-DHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLA 650

Query: 395  VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
             +       +HA + +   E   +V  ALLN Y   G   EA   FE +  +D+V+W+ M
Sbjct: 651  STTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIM 710

Query: 451  LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
             A YAQ G  + AV ++RQ+  EGVKP++ TFS+ +N  +  SA V  GK FHA + ++ 
Sbjct: 711  SAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNV-SGGSALVSDGKLFHALAAESG 769

Query: 511  LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            L++ + V++ LV +Y+K G ++ A  +F+      +V  N++I   AQHG +++A+++F 
Sbjct: 770  LDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFW 829

Query: 571  EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            +M+++ +  D  T + +I+AC HAG+V+EG   F  M     I PT+EHY+C VDL  RA
Sbjct: 830  KMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRA 889

Query: 631  GMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLS 676
            G LE A  II +MPF  +  VW ++L  C              R++ L PH+SA +V+LS
Sbjct: 890  GQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLS 949

Query: 677  NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
            N+Y ATG W++    RK M D  VK   G SW E+  + + F+AGD SHP++++IY  L+
Sbjct: 950  NIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLD 1009

Query: 737  ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
            +L   ++ AGY+ D      D++DE KE  L  HSER+AIAFGL+ATP    L+IVKNLR
Sbjct: 1010 KLELLMRRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLR 1066

Query: 797  VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            VCGDCHT  K IS +  R+I+VRD+ RFHHF  G CSC D W
Sbjct: 1067 VCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 167/579 (28%), Positives = 281/579 (48%), Gaps = 26/579 (4%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +++L++C    D   G+  H     +G  + + +   L+++Y+R  ++E+   +F  M E
Sbjct: 29  TALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQ 200
            NVVSWT+L+S  A+     R   LF  M +E    PNS+T   +L   A+   +A    
Sbjct: 89  RNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 201 VHTMVIKNGGE----VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
           +H M+ + G E      T V NA+I+MY K   + DA AVF  + ++D ++W +M   Y 
Sbjct: 149 IHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYA 208

Query: 257 TN-ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                + +A   F  M L        TF++ +  C +   LR    LHS + +  + FD 
Sbjct: 209 QERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEASLGFDP 265

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMM--REMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
                L+  Y KCG  E A  +F  M  R+  D+VSW AMIS  ++ G    A+  F ++
Sbjct: 266 LASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRL 325

Query: 374 TREGVRPNGFTYSIILTAQPAV-----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
             EG+RPN  T   IL A  A      +    H  I ++ Y +   +G A+++ Y K G 
Sbjct: 326 RLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGF 385

Query: 429 LDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
              A  VF  I  K D+++W+ ML            V  +  +   G+ PN+ +F +++N
Sbjct: 386 FSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILN 445

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNA-LCVSSALVTMYSKKGNIESASEVFKRQ--RKR 544
           AC+  S A++ G++ H+  +  + +     V++ LV+MY K G+I  A  VFK      R
Sbjct: 446 ACS-NSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSR 504

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
            LV+WN M+  YAQ+  +K+A     EM +  +  D ++F  V+++C  +    E Q   
Sbjct: 505 SLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLR 561

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
             ++   +    +E  + ++ ++ R   LE+A  + N M
Sbjct: 562 MCILESGYRSACLE--TALISMHGRCRELEQARSVFNEM 598



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 162/651 (24%), Positives = 296/651 (45%), Gaps = 35/651 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS----TLSSV 84
           ++  ++F +  +RN V +  L+    +      A  LF   R + L    +    TL ++
Sbjct: 77  EEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALF---RTMLLESSAAPNSYTLVAM 133

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVST----SLVDLYMRTNNVEDGRRVFDDMN 140
           L  C    D   GR +H    + G  R    +T    +++++Y +  ++ED   VF  + 
Sbjct: 134 LNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIP 193

Query: 141 ESNVVSWTSLLSGYARN-KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           E +VVSWT++   YA+  +     L +F  M ++ + PN  TF T LG       +    
Sbjct: 194 EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGT 250

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR---DSITWNSMVAGYV 256
            +H+++ +          NALI+MY K      A +VF  M  R   D ++WN+M++  V
Sbjct: 251 WLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASV 310

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIK-LCATTKELRLARQLHSQVLKNGIDFDH 315
               H +A   F  + L G      T ++++  L A+  +   AR  H ++ ++G   D 
Sbjct: 311 EAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDV 370

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            I   ++  Y+KCG    A  +F  +R   DV+SW  M+       +    VN F  M  
Sbjct: 371 VIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLL 430

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHII--KTNYEKSFSVGTALLNAYVKKGIL 429
            G+ PN  ++  IL A           ++H+ I+  + +Y +S SV T L++ Y K G +
Sbjct: 431 AGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES-SVATMLVSMYGKCGSI 489

Query: 430 DEAAKVFE--LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            EA  VF+   +  + +V W+ ML  YAQ   ++ A     ++   GV P+  +F+SV++
Sbjct: 490 SEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS 549

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           +C       ++ +    C +++   +A C+ +AL++M+ +   +E A  VF      D+V
Sbjct: 550 SCYCS----QEAQVLRMCILESGYRSA-CLETALISMHGRCRELEQARSVFNEMDHGDVV 604

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SW +M+   A++   K+   +F+ M+ + +  D  T    +  C  +  +  G +     
Sbjct: 605 SWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLG-KVIHAC 663

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           V E  +   +   + ++++YS  G   +A+     M  A     W  + AA
Sbjct: 664 VTEIGLEADIAVENALLNMYSNCGDWREALSFFETMK-ARDLVSWNIMSAA 713



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 242/492 (49%), Gaps = 19/492 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           ++ +L    D   +A     H ++   G E    + N LI+MY++   + +A A+F  ME
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLAR 300
           +R+ ++W ++++          AF  F  M L  +    S T V+++  CA +++L + R
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 301 QLHSQVLKNGIDFDHNIRT----GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            +H+ + + G++      T     ++  Y+KCG +EDA  +F  + E KDVVSWTAM   
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPE-KDVVSWTAMAGA 206

Query: 357 HLQNGAI-DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS- 414
           + Q       A+  F +M  + + PN  T+   +TA  A +  +    +    +E S   
Sbjct: 207 YAQERRFYPDALRIFREMLLQPLAPNVITF---ITALGACTSLRDGTWLHSLLHEASLGF 263

Query: 415 ---VGTALLNAYVKKGILDEAAKVFELI---DEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                 AL+N Y K G  + A  VF+ +    E D+V+W+AM++   + G    A+ I+R
Sbjct: 264 DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           +L  EG++PN  T  +++NA  A        + FH    ++     + + +A+++MY+K 
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKC 383

Query: 529 GNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
           G   +A  VF+R R K D++SWN+M+          K +  F  M    ++ + ++FI +
Sbjct: 384 GFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAI 443

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+++  +D G++   +++     Y      + +V +Y + G + +A  +   MP  +
Sbjct: 444 LNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPS 503

Query: 648 SATV-WRTVLAA 658
            + V W  +L A
Sbjct: 504 RSLVTWNVMLGA 515



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 214/441 (48%), Gaps = 35/441 (7%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P R+ V +N +L  Y ++   +EA    + + + G+     + +SVL +C C  +     
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE----A 557

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           QV   C+     R   + T+L+ ++ R   +E  R VF++M+  +VVSWT+++S  A N+
Sbjct: 558 QVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENR 617

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               V  LF RMQ+EG+ P+ FT +T L        +     +H  V + G E   +V N
Sbjct: 618 DFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVEN 677

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL++MY      R+A + F+ M+ RD ++WN M A Y    L  EA   F  M L G + 
Sbjct: 678 ALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKP 737

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            + TF + + +   +  +   +  H+   ++G+D D ++ TGL+  Y+KCGK+++A  +F
Sbjct: 738 DKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLF 797

Query: 339 SMMREMKDVVSWT-----AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
                 +    WT     A+I    Q+G  + AV  F +M +EGVRP+  T   I++A  
Sbjct: 798 ------RGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACG 851

Query: 394 AVSPFQVHAHIIKTN------YEKSFSVGTAL------LNAYVKKGILDEAAKVFELID- 440
                  HA +++         ++ F +   L      ++   + G L+ A ++   +  
Sbjct: 852 -------HAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPF 904

Query: 441 EKDIVAWSAMLAGYAQIGDTE 461
           E + + W+++L      GD E
Sbjct: 905 EDNTLVWTSLLGTCKLQGDAE 925



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 122/263 (46%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ +S+F+     + V +  ++     +   +E  NLF  ++  G+     TL++ L TC
Sbjct: 589 EQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTC 648

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+ +H    + G   D+ V  +L+++Y    +  +    F+ M   ++VSW 
Sbjct: 649 LASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN 708

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            + + YA+  +    + LF +MQ+EG+KP+  TFST L V     +V+     H +  ++
Sbjct: 709 IMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAES 768

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +   SV   L+ +Y K   + +A ++F G  D   +  N+++     +    EA + F
Sbjct: 769 GLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMF 828

Query: 269 NNMGLAGAELTRSTFVSVIKLCA 291
             M   G     +T VS+I  C 
Sbjct: 829 WKMQQEGVRPDVATLVSIISACG 851


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 268/744 (36%), Positives = 419/744 (56%), Gaps = 25/744 (3%)

Query: 119 LVDLYMRTNNVEDGRRVFDDM--NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           LVDLY+  + ++  R VFD M     NVV W  L+  YA N   +  ++L+++M   GI 
Sbjct: 57  LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           PN FTF  VL   +     +   ++H  + +   E    V  AL+  Y K   + DA+ V
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD M  RD + WNSM++G+  +E   +                 ST V V+   A    L
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSL 236

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           R  +++H   ++ G   D  + TG++  Y KC  ++ A +IF MM  +K+ V+W+AM+  
Sbjct: 237 RHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296

Query: 357 HLQNGAIDLAVNFFCQMTR---EGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY 409
           ++    +  A+  FCQ+     + +  +  T + ++     ++       +H + IK+ +
Sbjct: 297 YVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGF 356

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                VG  LL+ Y K GI++ A + F  +D +D V+++A+++GY Q G++E  ++++ +
Sbjct: 357 VLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLE 416

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +   G+ P + T +SV+ AC A  A +  G   H  +I         + +AL+ MY+K G
Sbjct: 417 MQLSGINPEKATLASVLPAC-AHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCG 475

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
            I++A +VF R  KR +VSWN+MI  Y  HG   +AL +F  M+ + L+ D +TFI +I+
Sbjct: 476 KIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLIS 535

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC+H+GLV EG+ +F+ M  +  I P MEHY+CMVDL SRAG+ ++    I +MP     
Sbjct: 536 ACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDV 595

Query: 650 TVWRTVLAACRLIS--------------LQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
            VW  +L+ACR+                L P  +  +VLLSNMY+A G W + A+VR   
Sbjct: 596 RVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQ 655

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
            ++  +K  G SWIE+    ++FL G   SHPQ  QI +KL+EL   +K  GY+ ++SYV
Sbjct: 656 KEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYV 715

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
            QD+++E KE +L  HSE+LAIAFG+++      + + KNLRVCGDCHT IK IS + +R
Sbjct: 716 FQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKR 775

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           DI VRD +RFHHFK+G+C+CGD+W
Sbjct: 776 DITVRDASRFHHFKDGICNCGDFW 799



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 283/543 (52%), Gaps = 26/543 (4%)

Query: 29  KKDQSLFDRSPQR--NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           K  + +FD+ P R  N V +N L+  Y  +  ++EA++L+  +   G+     T   VLK
Sbjct: 68  KIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLK 127

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L +   GR++HC+  +     +V VST+LVD Y +   ++D + VFD M++ +VV+
Sbjct: 128 ACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVA 187

Query: 147 WTSLLSGYARNKMN-DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W S++SG++ ++ + D V  L  +MQ + + PNS T   VL  +A    +    ++H   
Sbjct: 188 WNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFC 246

Query: 206 IKNG--GEVVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVTNELHM 262
           ++ G  G+VV  V   ++ +Y K + +  AR +FD M   ++ +TW++MV  YV  +   
Sbjct: 247 VRRGFVGDVV--VGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMR 304

Query: 263 EAFETFNNMGLAGAE---LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           EA E F  + +   +   L+  T  +VI++CA   +L     LH   +K+G   D  +  
Sbjct: 305 EALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGN 364

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+KCG +  A + F+ M +++D VS+TA+ISG++QNG  +  +  F +M   G+ 
Sbjct: 365 TLLSMYAKCGIINGAMRFFNEM-DLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGIN 423

Query: 380 PNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P   T + +L A   ++        H + I   +     +  AL++ Y K G +D A KV
Sbjct: 424 PEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKV 483

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + ++ IV+W+ M+  Y   G    A+ ++  + SEG+KP++ TF  +I+AC+     
Sbjct: 484 FDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLV 543

Query: 496 VEQGKQFHACS----IKAKLNNALCVSSALVTMYSKKGNI-ESASEVFKRQRKRDLVSWN 550
            E    F+A +    I  ++ +  C    +V + S+ G   E  S + K   + D+  W 
Sbjct: 544 AEGKYWFNAMTQDFGIIPRMEHYAC----MVDLLSRAGLFKEVHSFIEKMPLEPDVRVWG 599

Query: 551 SMI 553
           +++
Sbjct: 600 ALL 602



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 175/377 (46%), Gaps = 5/377 (1%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG---LPLFGSTLSSVLKTCGCLFDHVFG 97
           +N V ++ ++  Y      +EAL LF  +  L    + L   TL++V++ C  L D   G
Sbjct: 285 KNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTG 344

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
             +HC  +KSGF  D+ V  +L+ +Y +   +    R F++M+  + VS+T+++SGY +N
Sbjct: 345 TCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQN 404

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
             ++  L +F  MQ+ GI P   T ++VL   A    +      H   I  G    T +C
Sbjct: 405 GNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMIC 464

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NALI MY K   +  AR VFD M  R  ++WN+M+  Y  + + +EA   F+NM   G +
Sbjct: 465 NALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLK 524

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASK 336
               TF+ +I  C+ +  +   +   + + ++ GI         ++   S+ G  ++   
Sbjct: 525 PDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHS 584

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
               M    DV  W A++S       ++L      ++ + G    G  + ++     AV 
Sbjct: 585 FIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTG-NFVLLSNMYSAVG 643

Query: 397 PFQVHAHIIKTNYEKSF 413
            +   A +  T  E+ F
Sbjct: 644 RWDDAAQVRFTQKEQGF 660


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/773 (35%), Positives = 438/773 (56%), Gaps = 34/773 (4%)

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
           + G+  H   +K+ F   + +  + ++LY +   + + +++FD M+E +V+S+  L+SGY
Sbjct: 26  IHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGY 85

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
                  + + LF   ++  +K + F+++ VL         A    +H + I  G     
Sbjct: 86  GGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQV 145

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            + N LI MY K + +  AR +F+  ++ D+++WNS++ GY     + E  +    M   
Sbjct: 146 FLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHT 205

Query: 275 GAELTRSTFVSVIKLC--ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           G  L   T  S +K C       +   + LH   +K G+D D  + T L+  Y+K G + 
Sbjct: 206 GLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLG 265

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-----AVNFFCQMTREGVRPNGFTYSI 387
           DA ++F      ++VV + AMI+G +Q   ID      A+  F QM R+G++P+ FT+S 
Sbjct: 266 DAIQLFRTSPN-QNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSS 324

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           I+     +  F    Q+HAHI K N +    +G+ L+  Y   G  ++  K F    + D
Sbjct: 325 IIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLD 384

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           IV+W+ M+AGYAQ G  E A+ ++ +L + G KP+EF  +++++AC A  AA   G+Q H
Sbjct: 385 IVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSAC-ADVAAERSGEQVH 443

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
             ++K  +     V ++ ++MY+K GN++SA   F+  +  D+VSW+ MIC  AQHGH K
Sbjct: 444 GYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAK 503

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            A+ +F+ M+   +  + ITF+GV+TAC+H GLV+EG +Y++ M  ++ +   ++H +C+
Sbjct: 504 DAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCI 563

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
           VDL SRAG L  A + I    F     +WRT+L+ CR              LI L P +S
Sbjct: 564 VDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQES 623

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
           + YVLL N+Y   G      ++R+LM DR ++KE G SWIEV N+ +SF+ GDISHP S 
Sbjct: 624 SSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQ 683

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI----LSQHSERLAIAFGLVATPA 785
            IY KLE +  + +  GY       +Q++    KE      ++ HSE+LA++FG+V+ P 
Sbjct: 684 IIYKKLEGMLEKKRKIGYIDQK---IQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPP 740

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            AP++++KNLRVC DCH  +KLIS +E+R+I++RD+ RFHHFKEG CSC DYW
Sbjct: 741 SAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 273/539 (50%), Gaps = 19/539 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFDR  +R+ + YN L+  Y     + +A+ LF   R   L L   + + VL  CG +
Sbjct: 64  QKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQI 123

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G+ +H   +  G  + V ++  L+D+Y +   ++  R +F+  +E + VSW SL+
Sbjct: 124 KDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLI 183

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG--VLADEGIVATAVQVHTMVIKNG 209
           +GYAR    + +L+L  +M   G++ N+FT  + L    L    +V+    +H   +K G
Sbjct: 184 TGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQG 243

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN-----ELHMEA 264
            ++   V  AL+ MY K+  + DA  +F    +++ + +N+M+AG++       E   EA
Sbjct: 244 LDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEA 303

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            + F+ M   G + +  TF S+IK+C   +     +Q+H+ + K+ I  D  I + L+  
Sbjct: 304 LKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIEL 363

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           YS  G  ED  K F+   ++ D+VSWT MI+G+ QNG  + A+  F ++   G +P+ F 
Sbjct: 364 YSLLGSTEDQLKCFNSTPKL-DIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFI 422

Query: 385 YSIILTAQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            + +L+A   V    S  QVH + +KT       V  + ++ Y K G LD A   FE I 
Sbjct: 423 ITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK 482

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D+V+WS M+   AQ G  + A+ ++  + S G+ PN+ TF  V+ AC+     VE+G 
Sbjct: 483 NPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSH-GGLVEEGL 541

Query: 501 QFHACSIK---AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD-LVSWNSMICG 555
           +++    K    K+N   C  + +V + S+ G +  A          D  V W +++ G
Sbjct: 542 RYYESMKKDYDMKINVKHC--TCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSG 598



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 4/119 (3%)

Query: 477 PNEFTFSSV----INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           P+ F   SV    +   ++ S +   GK  HA  IK   N  L + +  + +YSK G + 
Sbjct: 2   PSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMG 61

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           +A ++F R  +R ++S+N +I GY   G   KA+ +F E R   L+ D  ++ GV++AC
Sbjct: 62  NAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSAC 120


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 277/775 (35%), Positives = 430/775 (55%), Gaps = 25/775 (3%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           ++L+ C    D +  + +HC+ +K G   D+  +  L++ Y++    +D   +FD+M E 
Sbjct: 54  AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           N VS+ +L  GYA        + L+ R+  EG + N   F++ L +            +H
Sbjct: 114 NNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLH 169

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           + ++K G +    V  ALI+ Y     V  AR VF+G+  +D + W  +V+ YV N    
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           ++ +  + M +AG      TF + +K          A+ +H Q+LK     D  +  GL+
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLL 289

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y++ G M DA K+F+ M +  DVV W+ MI+   QNG  + AV+ F +M    V PN 
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPK-NDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348

Query: 383 FTYSIILT--AQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           FT S IL   A    S    Q+H  ++K  ++    V  AL++ Y K   +D A K+F  
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  K+ V+W+ ++ GY  +G+   A  ++R+     V   E TFSS + AC A  A+++ 
Sbjct: 409 LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC-ASLASMDL 467

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G Q H  +IK      + VS++L+ MY+K G+I+ A  VF      D+ SWN++I GY+ 
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG  ++AL +   M+ +D + +G+TF+GV++ C++AGL+D+GQ+ F+ M+ +H I P +E
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISL 664
           HY+CMV L  R+G L+KAM +I  +P+  S  +WR +L+A                ++ +
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P D A YVL+SNMYA    W   A +RK M +  VKKE G SWIE +   + F  G   
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSD 707

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           HP    I   LE L+ +   AGY PD + VL D+DDE K+  L  HSERLA+A+GLV  P
Sbjct: 708 HPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMP 767

Query: 785 AGAP-LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +    + I+KNLR+C DCH+ +K+IS + +RD+V+RD NRFHHF  G+CSCGD+W
Sbjct: 768 SSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 248/533 (46%), Gaps = 12/533 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           + K   +LFD  P+RN V +  L   Y      Q+ + L+  + R G  L     +S LK
Sbjct: 99  FDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLK 154

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L        +H   VK G+  +  V  +L++ Y    +V+  R VF+ +   ++V 
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  ++S Y  N   +  L+L   M++ G  PN++TF T L      G    A  VH  ++
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K    +   V   L+ +Y +   + DA  VF+ M   D + W+ M+A +  N    EA +
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M  A       T  S++  CA  K   L  QLH  V+K G D D  +   L+  Y+
Sbjct: 335 LFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYA 394

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC KM+ A K+F+ +   K+ VSW  +I G+   G    A + F +  R  V     T+S
Sbjct: 395 KCEKMDTAVKLFAELSS-KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             L A  +++      QVH   IKTN  K  +V  +L++ Y K G +  A  VF  ++  
Sbjct: 454 SALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI 513

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+ +W+A+++GY+  G    A++I   +     KPN  TF  V++ C+  +  ++QG++ 
Sbjct: 514 DVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN-AGLIDQGQEC 572

Query: 503 HACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMI 553
               I+   +   L   + +V +  + G ++ A ++ +    +  ++ W +M+
Sbjct: 573 FESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 201/427 (47%), Gaps = 7/427 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F+    ++ V +  ++  Y  +   +++L L   +R  G      T  + LK    L
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               F + VH + +K+ +  D  V   L+ LY +  ++ D  +VF++M +++VV W+ ++
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + + +N   +  ++LF RM+   + PN FT S++L   A         Q+H +V+K G +
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V NALI +Y K + +  A  +F  +  ++ ++WN+++ GY       +AF  F   
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                 +T  TF S +  CA+   + L  Q+H   +K        +   L+  Y+KCG +
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A  +F+ M E  DV SW A+ISG+  +G    A+     M     +PNG T+  +L+ 
Sbjct: 501 KFAQSVFNEM-ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559

Query: 392 QPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIV 445
                          + I     E      T ++    + G LD+A K+ E I  E  ++
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619

Query: 446 AWSAMLA 452
            W AML+
Sbjct: 620 IWRAMLS 626



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 160/327 (48%), Gaps = 1/327 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P+ + V ++ ++  +C++    EA++LF+ +R   +     TLSS+L  C     
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H   VK GF  D+ VS +L+D+Y +   ++   ++F +++  N VSW +++ G
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y       +   +F       +     TFS+ LG  A    +   VQVH + IK      
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +V N+LI MY K   ++ A++VF+ ME  D  +WN++++GY T+ L  +A    + M  
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
              +    TF+ V+  C+    +   ++   S +  +GI+      T ++    + G+++
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQ 359
            A K+   +     V+ W AM+S  + 
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMN 630



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 186/389 (47%), Gaps = 20/389 (5%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L    + ++++ C    +   A+ +H  +LK G   D      L+ AY K G  +DA  +
Sbjct: 47  LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTA---Q 392
           F  M E ++ VS+  +  G+    A    +  + ++ REG  + P+ FT  + L     +
Sbjct: 107 FDEMPE-RNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             + P+ +H+ I+K  Y+ +  VG AL+NAY   G +D A  VFE I  KDIV W+ +++
Sbjct: 162 AEICPW-LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            Y + G  E ++K+   +   G  PN +TF + + A +    A +  K  H   +K    
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA-SIGLGAFDFAKGVHGQILKTCYV 279

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               V   L+ +Y++ G++  A +VF    K D+V W+ MI  + Q+G   +A+++F  M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSR 629
           R   +  +  T   ++  C        G+Q   ++V    +  IY +    + ++D+Y++
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS----NALIDVYAK 395

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
              ++ A+ +   +  + +   W TV+  
Sbjct: 396 CEKMDTAVKLFAELS-SKNEVSWNTVIVG 423


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 284/808 (35%), Positives = 446/808 (55%), Gaps = 53/808 (6%)

Query: 80   TLSSVLKTCGCLFDHVFGRQVHCECVKSGFA--RDVNVSTSLVDLYMRTNNVEDGRRVFD 137
               +VLK    + D   G+Q+H    K G A    V V+ SLV++Y +  ++   R+VFD
Sbjct: 332  AFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFD 391

Query: 138  DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD-EGIVA 196
            D+ + + VSW S+++   R +  +  L LF  M  E + P SFT  +V    +   G V 
Sbjct: 392  DIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVR 451

Query: 197  TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
               QVH   ++NG ++ T   NAL++MY +   V DA+A+F   + +D ++WN++++   
Sbjct: 452  LGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLS 510

Query: 257  TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
             N+   EA      M + G      T  SV+  C+  + LR+ R++H   L+NG D   N
Sbjct: 511  QNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNG-DLIEN 569

Query: 317  --IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
              + T L+  Y  C + +    +F  +   + V  W A+++G+ +N   D A+  F +M 
Sbjct: 570  SFVGTALVDMYCNCKQPKKGRLVFDGVVR-RTVAVWNALLAGYARNEFDDQALRLFVEMI 628

Query: 375  REG-VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             E    PN  T++ +L A      F     +H +I+K  + K   V  AL++ Y + G +
Sbjct: 629  SESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRV 688

Query: 430  DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE---------------- 473
            + +  +F  ++++DIV+W+ M+ G    G  + A+ +  ++                   
Sbjct: 689  EISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDG 748

Query: 474  GV--KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
            GV  KPN  T  +V+  C A  AA+ +GK+ HA ++K KL   + V SALV MY+K G +
Sbjct: 749  GVPFKPNSVTLMTVLPGCAA-LAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCL 807

Query: 532  ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM------RRQDLEFDGITFI 585
              AS VF +   R++++WN +I  Y  HG  ++ALE+F+ M       R+ +  + +T+I
Sbjct: 808  NLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYI 867

Query: 586  GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
             +  AC+H+G+VDEG   F  M   H + P  +HY+C+VDL  R+G +++A ++IN MP 
Sbjct: 868  AIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPS 927

Query: 646  AASAT-VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERAR 690
              +    W ++L ACR              L  L+P+ ++ YVL+SN+Y++ G W +   
Sbjct: 928  NLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALG 987

Query: 691  VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
            VRK M +  V+KE G SWIE  ++ + FL+GD SHPQS +++  LE LS R++  GY PD
Sbjct: 988  VRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPD 1047

Query: 751  TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
             S VL ++DDE KE +L  HSERLAIAFGL+ TP G  +++ KNLRVC DCH   K+ISK
Sbjct: 1048 ISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISK 1107

Query: 811  LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +  R+I++RD  RFHHF  G CSCGDYW
Sbjct: 1108 IVDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 250/512 (48%), Gaps = 40/512 (7%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS--VCNALISMYLKSKMVRDARA 235
           ++F F  VL   A    +    Q+H  V K G    +S  V N+L++MY K   +  AR 
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK- 294
           VFD + DRD ++WNSM+A     E    +   F  M     + T  T VSV   C+  + 
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            +RL +Q+H+  L+NG D        L+  Y++ G++ DA  +F +  + KD+VSW  +I
Sbjct: 449 GVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVF-DGKDLVSWNTVI 506

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKT 407
           S   QN   + A+ +   M  +GVRP+G T + +L   PA S         ++H + ++ 
Sbjct: 507 SSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVL---PACSQLERLRIGREIHCYALRN 563

Query: 408 N--YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
               E SF VGTAL++ Y       +   VF+ +  + +  W+A+LAGYA+    + A++
Sbjct: 564 GDLIENSF-VGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALR 622

Query: 466 IYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           ++ ++ SE    PN  TF+SV+ AC       ++ +  H   +K        V +AL+ M
Sbjct: 623 LFVEMISESEFCPNATTFASVLPACVRCKVFSDK-EGIHGYIVKRGFGKDKYVQNALMDM 681

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ--------- 575
           YS+ G +E +  +F R  KRD+VSWN+MI G    G    AL +  EM+R+         
Sbjct: 682 YSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTF 741

Query: 576 -DLEFDG--------ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            D E DG        +T + V+  C     + +G++     V +  +   +   S +VD+
Sbjct: 742 VDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQ-KLAMDVAVGSALVDM 800

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           Y++ G L  A  + ++MP     T W  ++ A
Sbjct: 801 YAKCGCLNLASRVFDQMPIRNVIT-WNVLIMA 831



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 210/451 (46%), Gaps = 30/451 (6%)

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           +E R    W  ++     +    +A  T+  M  A A      F +V+K  A   +L L 
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVA------YSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           +Q+H+ V K    F H   + + VA      Y KCG +  A ++F  + + +D VSW +M
Sbjct: 350 KQIHAHVFK----FGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPD-RDHVSWNSM 404

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTN 408
           I+   +    +L+++ F  M  E V P  FT   +  A   V        QVHA+ ++  
Sbjct: 405 IATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG 464

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
             ++++   AL+  Y + G +++A  +F + D KD+V+W+ +++  +Q    E A+    
Sbjct: 465 DLRTYT-NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVY 523

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSALVTMYSK 527
            +  +GV+P+  T +SV+ AC+     +  G++ H  +++   L     V +ALV MY  
Sbjct: 524 LMIVDGVRPDGVTLASVLPACSQLE-RLRIGREIHCYALRNGDLIENSFVGTALVDMYCN 582

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF--DGITFI 585
               +    VF    +R +  WN+++ GYA++    +AL +F EM  +  EF  +  TF 
Sbjct: 583 CKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISES-EFCPNATTFA 641

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKAMDIINRM 643
            V+ AC    +  + +     +V         + Y  + ++D+YSR G +E +  I  RM
Sbjct: 642 SVLPACVRCKVFSDKEGIHGYIVKRGF---GKDKYVQNALMDMYSRMGRVEISKTIFGRM 698

Query: 644 PFAASATVWRTVLAACRLISLQPHDSAIYVL 674
                   W T++  C  I    +D A+ +L
Sbjct: 699 N-KRDIVSWNTMITGC--IVCGRYDDALNLL 726



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 161/356 (45%), Gaps = 31/356 (8%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKT 87
           KK + +FD   +R    +N LL  Y R+    +AL LF+  I         +T +SVL  
Sbjct: 587 KKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPA 646

Query: 88  CGCLFDHVFGRQ--VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C+   VF  +  +H   VK GF +D  V  +L+D+Y R   VE  + +F  MN+ ++V
Sbjct: 647 --CVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIV 704

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVE------------------GIKPNSFTFSTVLG 187
           SW ++++G       D  L L H MQ                      KPNS T  TVL 
Sbjct: 705 SWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLP 764

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
             A    +    ++H   +K    +  +V +AL+ MY K   +  A  VFD M  R+ IT
Sbjct: 765 GCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVIT 824

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGA---ELTRS---TFVSVIKLCATTKELRLARQ 301
           WN ++  Y  +    EA E F  M   G    E+ R    T++++   C+ +  +     
Sbjct: 825 WNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLH 884

Query: 302 L-HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM-REMKDVVSWTAMIS 355
           L H+    +G++   +    L+    + G++++A ++ + M   +  V +W++++ 
Sbjct: 885 LFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLG 940


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/704 (37%), Positives = 410/704 (58%), Gaps = 84/704 (11%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+L+S+Y KS  + DA  VF  M DRD+++W  M+ G   +    +A +TF +M   G  
Sbjct: 285 NSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            ++ T  +V+  CA  +   + R++H  V+K G+     +   ++  Y KCG  E A  +
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404

Query: 338 F----------------------------SMMREM--KDVVSWTAMISGHLQNGAIDLAV 367
           F                            SM   M  + +VSW  +I+G+ QNG   +A+
Sbjct: 405 FERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMAL 464

Query: 368 NFFCQM-TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN-------------- 408
            FF +M +   + P+ FT + +L+A   +       Q+H++I++T               
Sbjct: 465 KFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALIST 524

Query: 409 YEKSFSVGTA-------------------LLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           Y KS SV TA                   LL  YVK G   +A ++F++++ +D++AW+A
Sbjct: 525 YAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTA 584

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GY Q G  + A++++R +   G +PN  T ++V++AC A  A ++ GKQ H  +I++
Sbjct: 585 MIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSAC-ASLAYLDYGKQIHCKAIRS 643

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEV 568
               ++ VS+A++T+Y++ G++  A  VF +   +++ ++W SMI   AQHG  ++A+ +
Sbjct: 644 LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVL 703

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM R  ++ D IT++GV++AC HAG VD+G++Y++ M NEH I P M HY+CMVDL++
Sbjct: 704 FEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHA 763

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG+L +A + I RMP A    VW ++LAACR              L+S+ PH+S  Y  
Sbjct: 764 RAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSA 823

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+N+Y+A G W + AR+ KL  D+ VKKE G+SW  V+ K + F A D+ HPQ + IY K
Sbjct: 824 LANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRK 883

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
             E+   +K AG+ PD + VL D+DDE KE +LS+HSE+LAIAFGL++TP    L+I+KN
Sbjct: 884 AAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKN 943

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCHT IK ISK   R+I+VRD  RFHHF++G CSC DYW
Sbjct: 944 LRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 247/540 (45%), Gaps = 93/540 (17%)

Query: 90  CLFDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           CLFD + + R            R+     SL+ LY ++  + D   VF +M + + VSWT
Sbjct: 269 CLFDDIPYAR------------RNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWT 316

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            ++ G  R+      ++ F  M  EG  P+ FT + VL   A         +VH  V+K 
Sbjct: 317 IMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKL 376

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGME--------------------------- 241
           G      V N+++ MY K      ARAVF+ M+                           
Sbjct: 377 GLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMF 436

Query: 242 ----DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA-ELTRSTFVSVIKLCATTKEL 296
               +R  ++WN+++AGY  N L   A + F+ M  A + E    T  SV+  CA  + L
Sbjct: 437 ENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRML 496

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF------------------ 338
           ++ +Q+HS +L+ G+     I   L+  Y+K G +E A +I                   
Sbjct: 497 KMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLE 556

Query: 339 --------SMMREM------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
                      RE+      +DV++WTAMI G+ QNG  D A+  F  M   G  PN  T
Sbjct: 557 GYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHT 616

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            + +L+A  +++      Q+H   I++  E+S SV  A++  Y + G +  A +VF+ I 
Sbjct: 617 LAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQIC 676

Query: 441 -EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             K+ + W++M+   AQ G  E AV ++ ++   GVKP+  T+  V++AC A +  V++G
Sbjct: 677 WRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSAC-AHAGFVDKG 735

Query: 500 KQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           K+++        I  ++++  C    +V ++++ G +  A E  +R     D V W S++
Sbjct: 736 KRYYEQMQNEHGIVPQMSHYAC----MVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLL 791



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 223/497 (44%), Gaps = 85/497 (17%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F   P R+ V +  ++    R     +A+  FL +   G      TL++VL +C  +  
Sbjct: 303 VFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEA 362

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN------------- 140
              GR+VH   VK G +  V V+ S++ +Y +  + E  R VF+ M              
Sbjct: 363 CGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSL 422

Query: 141 ------------------ESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFT 181
                             E ++VSW ++++GY +N ++   L+ F RM     ++P++FT
Sbjct: 423 YTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFT 482

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV----------- 230
            ++VL   A+  ++    Q+H+ +++ G    + + NALIS Y KS  V           
Sbjct: 483 VTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAV 542

Query: 231 ----------------------RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                                 + AR +FD M +RD I W +M+ GY  N  + EA E F
Sbjct: 543 VADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELF 602

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +M L G E    T  +V+  CA+   L   +Q+H + +++  +   ++   ++  Y++ 
Sbjct: 603 RSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARS 662

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  A ++F  +   K+ ++WT+MI    Q+G  + AV  F +M R GV+P+  TY  +
Sbjct: 663 GSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGV 722

Query: 389 LTAQPAVSPFQVHAHII---KTNYEK---------SFSVGTALLNAYVKKGILDEAAKVF 436
           L+A         HA  +   K  YE+           S    +++ + + G+L EA +  
Sbjct: 723 LSA-------CAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFI 775

Query: 437 ELID-EKDIVAWSAMLA 452
           + +    D V W ++LA
Sbjct: 776 QRMPVAPDTVVWGSLLA 792



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 195/450 (43%), Gaps = 72/450 (16%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTCG 89
           S+F+   +R+ V +N ++  Y ++ L   AL  F   L    +    F  T++SVL  C 
Sbjct: 434 SMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAF--TVTSVLSACA 491

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV-------------- 135
            L     G+Q+H   +++G      +  +L+  Y ++ +VE  RR+              
Sbjct: 492 NLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISF 551

Query: 136 -------------------FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
                              FD MN  +V++WT+++ GY +N  ND  +ELF  M + G +
Sbjct: 552 TALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPE 611

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           PNS T + VL   A    +    Q+H   I++  E   SV NA+I++Y +S  V  AR V
Sbjct: 612 PNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRV 671

Query: 237 FDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           FD +  R ++ITW SM+     + L  +A   F  M   G +    T+V V+  CA    
Sbjct: 672 FDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGF 731

Query: 296 LRLARQLHSQVL-KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +   ++ + Q+  ++GI    +    ++  +++ G + +A +    M    D V W +++
Sbjct: 732 VDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLL 791

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
           +               C+     VR N     +      ++ P    A+           
Sbjct: 792 AA--------------CR-----VRKNADLAELAAGKLLSIDPHNSGAY----------- 821

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDI 444
             +AL N Y   G  ++AA++++L  +K +
Sbjct: 822 --SALANVYSACGRWNDAARIWKLRKDKGV 849



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 145/321 (45%), Gaps = 43/321 (13%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           +K+ + +FD    R+ + +  ++  Y ++  + EA+ LF  +  +G      TL++VL  
Sbjct: 564 TKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSA 623

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVS 146
           C  L    +G+Q+HC+ ++S   + V+VS +++ +Y R+ +V   RRVFD +      ++
Sbjct: 624 CASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT 683

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WTS++   A++ + ++ + LF  M   G+KP+  T+  VL   A  G V    + +  + 
Sbjct: 684 WTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQ 743

Query: 207 KNGGEVVT-SVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEA 264
              G V   S    ++ ++ ++ ++ +A      M    D++ W S++A           
Sbjct: 744 NEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA---------- 793

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN--IRTGLM 322
                                    C   K   LA     ++L   ID  HN    + L 
Sbjct: 794 -------------------------CRVRKNADLAELAAGKLLS--ID-PHNSGAYSALA 825

Query: 323 VAYSKCGKMEDASKIFSMMRE 343
             YS CG+  DA++I+ + ++
Sbjct: 826 NVYSACGRWNDAARIWKLRKD 846


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 292/865 (33%), Positives = 455/865 (52%), Gaps = 103/865 (11%)

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSG--------------------FAR 111
           +G+ ++ S  +S+LK C          Q+H + + SG                    F  
Sbjct: 38  IGVDVYPSHFASLLKECKSANT---VHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFIS 94

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
             ++ T +V  Y+     +    V + +  S  V W  L+  + +    D  + +  RM 
Sbjct: 95  PRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRML 154

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
             G +P+ FT   VL    +          H ++  NG E    +CNAL++MY +   + 
Sbjct: 155 RAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 214

Query: 232 DARAVFDGMEDR---DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT---RSTFVS 285
           +A  +FD +  R   D I+WNS+V+ +V +     A + F+ M L   E     RS  +S
Sbjct: 215 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 274

Query: 286 VIKL---CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           ++ +   C + K +   +++H   ++NG   D  +   L+ AY+KCG ME+A K+F+MM 
Sbjct: 275 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM- 333

Query: 343 EMKDVVSWTAMISGHLQNG----AIDL-------------------------------AV 367
           E KDVVSW AM++G+ Q+G    A +L                               A+
Sbjct: 334 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 393

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT----------NYEKSF 413
           N F QM   G  PN  T   +L+A  ++  F    ++HA+ +K             ++  
Sbjct: 394 NLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDL 453

Query: 414 SVGTALLNAYVKKGILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            V  AL++ Y K      A  +F+ I  +E+++V W+ M+ G+AQ GD+  A+K++ ++ 
Sbjct: 454 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 513

Query: 472 SE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL--NNALCVSSALVTMYSK 527
           SE  GV PN +T S ++ AC A  AA+  GKQ HA  ++     ++A  V++ L+ MYSK
Sbjct: 514 SEPYGVAPNAYTISCILMAC-AHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 572

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G++++A  VF    ++  +SW SM+ GY  HG   +AL++F +MR+     D ITF+ V
Sbjct: 573 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 632

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+H G+VD+G  YFD M  ++ + P  EHY+C +DL +R+G L+KA   +  MP   
Sbjct: 633 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEP 692

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           +A VW  +L+ACR              L+ +   +   Y L+SN+YA  G W++ AR+R 
Sbjct: 693 TAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRH 752

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
           LM    +KK  G SW++ +  T SF  GD SHP S QIY+ LE L  R+K  GY P+T++
Sbjct: 753 LMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNF 812

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
            L D+D+E K  +L +HSE+LA+A+GL+ T  G P++I KNLRVCGDCH+    ISK+  
Sbjct: 813 ALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVD 872

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
            +IVVRD +RFHHFK G CSCG YW
Sbjct: 873 HEIVVRDPSRFHHFKNGSCSCGGYW 897



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 164/613 (26%), Positives = 275/613 (44%), Gaps = 66/613 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           + +R      V +N L+ E+ +      A+N+   + R G      TL  VLK CG L  
Sbjct: 118 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPS 177

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE---SNVVSWTSL 150
           +  G   H     +GF  +V +  +LV +Y R  ++E+   +FD++ +    +V+SW S+
Sbjct: 178 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 237

Query: 151 LSGYARNKMNDRVLELFHRMQ-VEGIKPNS-----FTFSTVLGVLADEGIVATAVQVHTM 204
           +S + ++      L+LF +M  +   KP +      +   +L        V    +VH  
Sbjct: 238 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 297

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            I+NG      V NALI  Y K  ++ +A  VF+ ME +D ++WN+MVAGY  +     A
Sbjct: 298 AIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAA 357

Query: 265 FETFNNMG-----------------------------------LAGAELTRSTFVSVIKL 289
           FE F NM                                     +G+     T +SV+  
Sbjct: 358 FELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSA 417

Query: 290 CATTKELRLARQLHSQVLKN----------GIDFDHNIRTGLMVAYSKCGKMEDASKIF- 338
           CA+        ++H+  LKN          G D D  +   L+  YSKC   + A  IF 
Sbjct: 418 CASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFD 477

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSIILTAQPAVS 396
            +  E ++VV+WT MI GH Q G  + A+  F +M  E  GV PN +T S IL A   ++
Sbjct: 478 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 537

Query: 397 PF----QVHAHIIKTN-YEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                 Q+HA++++ + YE S + V   L++ Y K G +D A  VF+ + +K  ++W++M
Sbjct: 538 AIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSM 597

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKA 509
           + GY   G    A+ I+ ++   G  P++ TF  V+ AC+     V+QG   F + S   
Sbjct: 598 MTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH-CGMVDQGLSYFDSMSADY 656

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFK-RQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            L       +  + + ++ G ++ A    K    +   V W +++     H + + A   
Sbjct: 657 GLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHA 716

Query: 569 FKEMRRQDLEFDG 581
             ++   + E DG
Sbjct: 717 LNKLVEMNAENDG 729



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 46/378 (12%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +  ++  Y +     EALNLF  +   G      T+ SVL  C  L     G ++H
Sbjct: 372 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 431

Query: 102 CECVKS----------GFARDVNVSTSLVDLYMRTNNVEDGRRVFDD--MNESNVVSWTS 149
              +K+          G   D+ V  +L+D+Y +  + +  R +FDD  + E NVV+WT 
Sbjct: 432 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 491

Query: 150 LLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           ++ G+A+   ++  L+LF  M  E  G+ PN++T S +L   A    +    Q+H  V++
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551

Query: 208 NGGEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +     ++  V N LI MY K   V  AR VFD M  + +I+W SM+ GY  +    EA 
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT--GL-- 321
           + F+ M  AG      TF+ V+  C+           H  ++  G+ +  ++    GL  
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLTP 660

Query: 322 --------MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL---AVNFF 370
                   +   ++ G+++ A +    M      V W A++S    +  ++L   A+N  
Sbjct: 661 RAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKL 720

Query: 371 CQMTREGVRPNGFTYSII 388
            +M  E    N  +Y++I
Sbjct: 721 VEMNAE----NDGSYTLI 734



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 6/173 (3%)

Query: 29  KKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGI--RRLGLPLFGSTLSSV 84
           K  +S+FD  P  +RN V +  ++  + +     +AL LF+ +     G+     T+S +
Sbjct: 470 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 529

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           L  C  L     G+Q+H   ++          V+  L+D+Y +  +V+  R VFD M++ 
Sbjct: 530 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 589

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           + +SWTS+++GY  +      L++F +M+  G  P+  TF  VL   +  G+V
Sbjct: 590 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 642


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 269/762 (35%), Positives = 439/762 (57%), Gaps = 29/762 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR- 156
           +++H   +  G ++++ +ST L++LY+   ++   R  FD +++ N+ SW S++S Y R 
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 157 ---NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              ++  + V +LF       ++P+ +TF  +L        +    +VH  V K G E  
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDD 155

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  +L+ +Y +  ++  A  VF  M  +D  +WN+M++G+  N     A    N M  
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G ++   T  S++ +CA + ++     +H  VLK+G+D D  +   L+  YSK G+++D
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F  M E++D+VSW ++I+ + QN     A+ FF  M   G+RP+  T   + +   
Sbjct: 276 AQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS 334

Query: 394 AVSPFQVHAHII-----KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            +S  ++   I+     +   +K   +G AL+N Y K G ++ A  VF+ +  KD ++W+
Sbjct: 335 QLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWN 394

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
            ++ GY Q G    A+  Y  +       PN+ T+ S+I A +    A++QG + HA  I
Sbjct: 395 TLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH-VGALQQGMKIHAKLI 453

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K  L   + V++ L+ +Y K G +E A  +F    +   V WN++I     HG  ++AL+
Sbjct: 454 KNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQ 513

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +FK+M  + ++ D ITF+ +++AC+H+GLVDEGQ+ FDIM  E+ I P+++HY CMVDL 
Sbjct: 514 LFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLL 573

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
            RAG LEKA +++  MP    A++W  +L+AC              RL+ +   +   YV
Sbjct: 574 GRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYV 633

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LLSN+YA T  W+   +VR L  DR ++K  G+S + V +K   F  G+ +HP+  +IY 
Sbjct: 634 LLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYK 693

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           +L+ LS ++K  GY PD S+V QDI+++ KE IL+ HSERLAIAFG+++TP  +P++I K
Sbjct: 694 ELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFK 753

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           NLRVCGDCH   K IS++  R+IVVRD+NRFHHFK+G+CSC 
Sbjct: 754 NLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 273/546 (50%), Gaps = 21/546 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALN----LF--LGIRRLGLPLFGSTLSSVL 85
           +S FD   ++N   +N ++  Y R   + EA+N    LF   G   L    +  T   +L
Sbjct: 74  RSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFY--TFPPIL 131

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           K C  L D   G++VHC   K GF  DV V+ SLV LY R   ++   +VF DM   +V 
Sbjct: 132 KACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW +++SG+ +N      L + +RM+ EG+K ++ T +++L V A    V   V +H  V
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K+G +    V NALI+MY K   ++DA+ VFD ME RD ++WNS++A Y  N     A 
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL-KNGIDFDHNIRTGLMVA 324
             F  M L G      T VS+  + +   + R++R +   V+ +  +D D  I   L+  
Sbjct: 309 RFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNM 368

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM--TREGVRPNG 382
           Y+K G M  A  +F  +   KD +SW  +++G+ QNG    A++ +  M   R+ + PN 
Sbjct: 369 YAKLGYMNCAHTVFDQLPR-KDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI-PNQ 426

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T+  I+ A   V   Q    +HA +IK +      V T L++ Y K G L++A  +F  
Sbjct: 427 GTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           I     V W+A++A     G  E A+++++ + +E VK +  TF S+++AC+      E 
Sbjct: 487 IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEG 546

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYA 557
            K F     +  +  +L     +V +  + G +E A E+ +    + D   W +++    
Sbjct: 547 QKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACK 606

Query: 558 QHGHTK 563
            +G+ +
Sbjct: 607 IYGNAE 612



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 18/186 (9%)

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           K Y+  T+   K  +F  +++ N+C   +A     K+ HA  +    +  + +S+ L+ +
Sbjct: 10  KFYKSATTSLHKDADF--NALFNSCVNVNAT----KKLHALLLVFGKSQNIVLSTKLINL 63

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL----EVFKEMRRQDLEFD 580
           Y   G+I  +   F    K+++ SWNS+I  Y + G   +A+    ++F       L  D
Sbjct: 64  YVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPD 123

Query: 581 GITFIGVITACTHAGLVDEGQQYFDI--MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
             TF  ++ AC    LVD  + +  +  M  E  ++      + +V LYSR G+L+ A  
Sbjct: 124 FYTFPPILKACV--SLVDGKKVHCCVFKMGFEDDVFVA----ASLVHLYSRYGVLDVAHK 177

Query: 639 IINRMP 644
           +   MP
Sbjct: 178 VFVDMP 183


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 292/865 (33%), Positives = 455/865 (52%), Gaps = 103/865 (11%)

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSG--------------------FAR 111
           +G+ ++ S  +S+LK C          Q+H + + SG                    F  
Sbjct: 31  IGVDVYPSHFASLLKECKSANT---VHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFIS 87

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
             ++ T +V  Y+     +    V + +  S  V W  L+  + +    D  + +  RM 
Sbjct: 88  PRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRML 147

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
             G +P+ FT   VL    +          H ++  NG E    +CNAL++MY +   + 
Sbjct: 148 RAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 207

Query: 232 DARAVFDGMEDR---DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT---RSTFVS 285
           +A  +FD +  R   D I+WNS+V+ +V +     A + F+ M L   E     RS  +S
Sbjct: 208 EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 267

Query: 286 VIKL---CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           ++ +   C + K +   +++H   ++NG   D  +   L+ AY+KCG ME+A K+F+MM 
Sbjct: 268 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM- 326

Query: 343 EMKDVVSWTAMISGHLQNG----AIDL-------------------------------AV 367
           E KDVVSW AM++G+ Q+G    A +L                               A+
Sbjct: 327 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 386

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT----------NYEKSF 413
           N F QM   G  PN  T   +L+A  ++  F    ++HA+ +K             ++  
Sbjct: 387 NLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDL 446

Query: 414 SVGTALLNAYVKKGILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            V  AL++ Y K      A  +F+ I  +E+++V W+ M+ G+AQ GD+  A+K++ ++ 
Sbjct: 447 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 506

Query: 472 SE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL--NNALCVSSALVTMYSK 527
           SE  GV PN +T S ++ AC A  AA+  GKQ HA  ++     ++A  V++ L+ MYSK
Sbjct: 507 SEPYGVAPNAYTISCILMAC-AHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 565

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G++++A  VF    ++  +SW SM+ GY  HG   +AL++F +MR+     D ITF+ V
Sbjct: 566 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 625

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+H G+VD+G  YFD M  ++ + P  EHY+C +DL +R+G L+KA   +  MP   
Sbjct: 626 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEP 685

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           +A VW  +L+ACR              L+ +   +   Y L+SN+YA  G W++ AR+R 
Sbjct: 686 TAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRH 745

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
           LM    +KK  G SW++ +  T SF  GD SHP S QIY+ LE L  R+K  GY P+T++
Sbjct: 746 LMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNF 805

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
            L D+D+E K  +L +HSE+LA+A+GL+ T  G P++I KNLRVCGDCH+    ISK+  
Sbjct: 806 ALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVD 865

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
            +IVVRD +RFHHFK G CSCG YW
Sbjct: 866 HEIVVRDPSRFHHFKNGSCSCGGYW 890



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 164/613 (26%), Positives = 275/613 (44%), Gaps = 66/613 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           + +R      V +N L+ E+ +      A+N+   + R G      TL  VLK CG L  
Sbjct: 111 VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPS 170

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE---SNVVSWTSL 150
           +  G   H     +GF  +V +  +LV +Y R  ++E+   +FD++ +    +V+SW S+
Sbjct: 171 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 230

Query: 151 LSGYARNKMNDRVLELFHRMQ-VEGIKPNS-----FTFSTVLGVLADEGIVATAVQVHTM 204
           +S + ++      L+LF +M  +   KP +      +   +L        V    +VH  
Sbjct: 231 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 290

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            I+NG      V NALI  Y K  ++ +A  VF+ ME +D ++WN+MVAGY  +     A
Sbjct: 291 AIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAA 350

Query: 265 FETFNNMG-----------------------------------LAGAELTRSTFVSVIKL 289
           FE F NM                                     +G+     T +SV+  
Sbjct: 351 FELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSA 410

Query: 290 CATTKELRLARQLHSQVLKN----------GIDFDHNIRTGLMVAYSKCGKMEDASKIF- 338
           CA+        ++H+  LKN          G D D  +   L+  YSKC   + A  IF 
Sbjct: 411 CASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFD 470

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSIILTAQPAVS 396
            +  E ++VV+WT MI GH Q G  + A+  F +M  E  GV PN +T S IL A   ++
Sbjct: 471 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 530

Query: 397 PF----QVHAHIIKTN-YEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                 Q+HA++++ + YE S + V   L++ Y K G +D A  VF+ + +K  ++W++M
Sbjct: 531 AIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSM 590

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKA 509
           + GY   G    A+ I+ ++   G  P++ TF  V+ AC+     V+QG   F + S   
Sbjct: 591 MTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH-CGMVDQGLSYFDSMSADY 649

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
            L       +  + + ++ G ++ A    K    +   V W +++     H + + A   
Sbjct: 650 GLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHA 709

Query: 569 FKEMRRQDLEFDG 581
             ++   + E DG
Sbjct: 710 LNKLVEMNAENDG 722



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 46/378 (12%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +  ++  Y +     EALNLF  +   G      T+ SVL  C  L     G ++H
Sbjct: 365 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 424

Query: 102 CECVKS----------GFARDVNVSTSLVDLYMRTNNVEDGRRVFDD--MNESNVVSWTS 149
              +K+          G   D+ V  +L+D+Y +  + +  R +FDD  + E NVV+WT 
Sbjct: 425 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 484

Query: 150 LLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           ++ G+A+   ++  L+LF  M  E  G+ PN++T S +L   A    +    Q+H  V++
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544

Query: 208 NGGEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +     ++  V N LI MY K   V  AR VFD M  + +I+W SM+ GY  +    EA 
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT--GL-- 321
           + F+ M  AG      TF+ V+  C+           H  ++  G+ +  ++    GL  
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLTP 653

Query: 322 --------MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL---AVNFF 370
                   +   ++ G+++ A +    M      V W A++S    +  ++L   A+N  
Sbjct: 654 RAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKL 713

Query: 371 CQMTREGVRPNGFTYSII 388
            +M  E    N  +Y++I
Sbjct: 714 VEMNAE----NDGSYTLI 727



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 6/173 (3%)

Query: 29  KKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGI--RRLGLPLFGSTLSSV 84
           K  +S+FD  P  +RN V +  ++  + +     +AL LF+ +     G+     T+S +
Sbjct: 463 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 522

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           L  C  L     G+Q+H   ++          V+  L+D+Y +  +V+  R VFD M++ 
Sbjct: 523 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 582

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           + +SWTS+++GY  +      L++F +M+  G  P+  TF  VL   +  G+V
Sbjct: 583 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 635


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 279/829 (33%), Positives = 449/829 (54%), Gaps = 26/829 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +F+  P RN V +  L+  Y  +   +E +N +  +R  G+    + ++ V+ +CG L
Sbjct: 114 QKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFL 173

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D + G Q+    +K G    V+ + SL+ ++    ++ +   +F++MNE + +SW S++
Sbjct: 174 MDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSII 233

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S  A+N +++     FH M++   + N  T S +L +      +     VH + +K G E
Sbjct: 234 SANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLE 293

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +CN L+S+Y  +   +DA  +F  M +RD I+WNSM+A YV +   + A + F  M
Sbjct: 294 SNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEM 353

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                E+   TF S +  C   +     + LH  V+  G+  +  I   L+  Y KC KM
Sbjct: 354 LWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKM 413

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII--- 388
            +A K+F  M ++ D V+W A+I G   N  ++ AV  F ++ REG   +G  Y  I   
Sbjct: 414 AEAKKVFQRMPKL-DKVTWNALIGGFANNAELNEAVAAF-KLMREG-STSGVDYITIVNI 470

Query: 389 ----LTAQPAVS-PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
               LT +  +     +HAH + T ++    V ++L+  Y K G L  ++ +F+ +  K 
Sbjct: 471 LGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKT 530

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
              W+A++A  A+ G  E A+K+  ++ S G++ ++F FS+ ++   A  A +E+G+Q H
Sbjct: 531 SSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSV-AADLAMLEEGQQLH 589

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
             +IK        + +A + MY K G ++ A  +  +   R  +SWN++I   A+HG   
Sbjct: 590 GSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFH 649

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           KA E F +M +  ++ + ++F+ +++AC+H GLVDEG  Y+  M + + I P +EH  CM
Sbjct: 650 KAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCM 709

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
           +DL  R+G L +A   I  MP   +  VWR++LA+CR              L+ L P D 
Sbjct: 710 IDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDD 769

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
           + YVL SN++A  G W++   VR  M   K++K+  +SW++ K     F  GD +HPQ  
Sbjct: 770 SAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQME 829

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
           QI  KL  L   + +AGY PDTSY LQD D+E KE  +  HSER+A+AFGL+  P G+ +
Sbjct: 830 QINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTV 889

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +I KNLRVCGDCH+  K +S +  R IV+RD  RFHHF  G CSC DYW
Sbjct: 890 RIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 175/639 (27%), Positives = 321/639 (50%), Gaps = 23/639 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-C 90
           Q +FDR  +RN   +N ++  Y R   + EA+  F  I  +G+   G  ++S++  C   
Sbjct: 12  QLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKS 71

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                 G Q H   +K G   DV V TS V  Y     V + +++F++M + NVVSWTSL
Sbjct: 72  SIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSL 131

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIK 207
           +  Y+ N     V+  + RM+ EGI  N    + V+   G L D   +    Q+    +K
Sbjct: 132 MVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMD---IILGHQLLGHALK 188

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G E   S  N+LI M+     + +A ++F+ M +RD+I+WNS+++    N LH E+F  
Sbjct: 189 FGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRY 248

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M L   E+  +T   ++ +C +   L+  + +H   +K G++ +  +   L+  YS 
Sbjct: 249 FHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSD 308

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G+ +DA  IF  M E +D++SW +M++ ++Q+G    A+  F +M       N  T++ 
Sbjct: 309 AGRSKDAELIFRRMPE-RDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTS 367

Query: 388 ILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            L A      F     +H  ++    +    +G  L+  Y K   + EA KVF+ + + D
Sbjct: 368 ALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLD 427

Query: 444 IVAWSAMLAGY---AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            V W+A++ G+   A++ +   A K+ R+ ++ GV  +  T  +++ +C      ++ G 
Sbjct: 428 KVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTHEDLIKYGI 485

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
             HA ++    +    V S+L+TMY+K G++ S+S +F +   +    WN++I   A++G
Sbjct: 486 PIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYG 545

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             ++AL++   MR   +EFD   F   ++      +++EGQQ     +    +   ++H+
Sbjct: 546 FGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIK---LGFELDHF 602

Query: 621 --SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
             +  +D+Y + G L+ A+ I+ + P   S   W T+++
Sbjct: 603 IINAAMDMYGKCGELDDALRILPQ-PTDRSRLSWNTLIS 640



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 259/548 (47%), Gaps = 19/548 (3%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +   +   + VFD M+E N  SW  ++SGY R       +  F  +   GIKP+ F 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 182 FSTVLGVLADEGIVAT-AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            ++++       I+A    Q H   IK G      V  + +  Y    +V +A+ +F+ M
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            DR+ ++W S++  Y  N    E   T+  M   G     +    VI  C    ++ L  
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           QL    LK G++   +    L+  +  CG + +A  IF+ M E +D +SW ++IS + QN
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNE-RDTISWNSIISANAQN 239

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVG 416
              + +  +F  M       N  T SI+L+   +V   +    VH   +K   E +  + 
Sbjct: 240 TLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLC 299

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
             LL+ Y   G   +A  +F  + E+D+++W++MLA Y Q G    A+K++ ++     +
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE 359

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
            N  TF+S + AC  P      GK  H   +   L + L + + L+T Y K   +  A +
Sbjct: 360 INYVTFTSALAACLDPE-FFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKK 418

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE-FDGITFIGVITAC-THA 594
           VF+R  K D V+WN++I G+A +    +A+  FK MR       D IT + ++ +C TH 
Sbjct: 419 VFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHE 478

Query: 595 GLVDEGQQYFDIMVNEHHI---YPTMEHY-SCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
            L+  G     I ++ H +   +   +H  S ++ +Y++ G L  +  I +++ F  S +
Sbjct: 479 DLIKYG-----IPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTS-S 532

Query: 651 VWRTVLAA 658
           VW  ++AA
Sbjct: 533 VWNAIIAA 540


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 299/847 (35%), Positives = 483/847 (57%), Gaps = 52/847 (6%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL--------FGSTLSS 83
            +S+FD    RN + +N ++  Y R      A +LF  +++ GL          FGS +++
Sbjct: 230  RSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITT 289

Query: 84   VLKTCG---CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
               +     C+ + +  R       KSGF +D+ VS++LV  + R    +D + +F+ M 
Sbjct: 290  ACSSVDFGLCVLEQMLAR-----VEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMG 344

Query: 141  ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA---- 196
              NVVS   L+ G  + K  +   ++FH M+ + +  NS ++  +L   ++  ++     
Sbjct: 345  VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDSYVVLLSAFSEFSVLEEGRR 403

Query: 197  TAVQVHTMVIKNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
               +VH  VI+ G  +   ++ N L++MY KS  + DA +VF+ M ++DS++WNS+++G 
Sbjct: 404  KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 463

Query: 256  VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
              NE   +A E+F+ M   G+  +  T +S +  CA+   + L  Q+H   LK G+D D 
Sbjct: 464  DQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 523

Query: 316  NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN--GAIDLAVNFFCQM 373
            ++   L+  Y++ G   +  K+FS+M E  D VSW ++I G L +   ++  AV +F QM
Sbjct: 524  SVSNALLALYAETGCFTECLKVFSLMPEY-DQVSWNSVI-GALSDSEASVSQAVKYFLQM 581

Query: 374  TREGVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             R G   +  T+  IL+A  ++S      Q+HA ++K       ++G ALL+ Y K G +
Sbjct: 582  MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEM 641

Query: 430  DEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
            +E  K+F  + E +D V+W++M++GY        A+ +   +  +G + + FTF+++++A
Sbjct: 642  NECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSA 701

Query: 489  CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
            C A  A +E+G + HAC I+A L + + V SALV MYSK G I+ AS  F+    R++ S
Sbjct: 702  C-ASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYS 760

Query: 549  WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
            WNSMI GYA+HGH +KAL++F  M       D +TF+GV++AC+H G V+EG ++F  M 
Sbjct: 761  WNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMS 820

Query: 609  NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------- 659
              + + P +EH+SCMVDL  RAG L++  D IN MP   +  +WRTVL AC         
Sbjct: 821  EVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTE 880

Query: 660  -------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                    L+ L+P ++  YVLL+NMYA+   W++ A+ R  M +  VKKEAG SW+ +K
Sbjct: 881  LGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMK 940

Query: 713  NKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSE 772
            +  + F+AGD  HP+ + IY KL EL+ +++DAGY P T Y L D++ E+KE +LS HSE
Sbjct: 941  DGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSE 1000

Query: 773  RLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL--ERRDIVVRDTNRFHHFKEG 830
            ++A+AF L    A  P++I+KNLRVCGDCH+    ISK+      + ++ +N     +  
Sbjct: 1001 KIAVAFVLTRQSA-LPIRIMKNLRVCGDCHSAFGYISKIIFFFLKMAMKPSNNI-WIRRQ 1058

Query: 831  LCSCGDY 837
             C CGD+
Sbjct: 1059 QCPCGDW 1065



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 196/724 (27%), Positives = 343/724 (47%), Gaps = 91/724 (12%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R++H + +K GF  ++ +S +L+++Y+R  ++   +++FD+M+  N+V+W  L+SGY +
Sbjct: 90  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT--AVQVHTMVIKN--GGEV 212
           N   D     F  M   G  PN + F + L    + G       VQ+H ++ K   G +V
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209

Query: 213 VTSVCNALISMYLKS-KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           V  VCN LISMY        DAR+VFDG+  R+SI+WNS+++ Y      + A++ F++M
Sbjct: 210 V--VCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSM 267

Query: 272 GLAGAELT----RSTFVSVIKLCATTKELRLA--RQLHSQVLKNGIDFDHNIRTGLMVAY 325
              G   +      TF S+I    ++ +  L    Q+ ++V K+G   D  + + L+  +
Sbjct: 268 QKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGF 327

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           ++ G  +DA  IF  M  +++VVS   ++ G ++    + A   F +M ++ V  N  +Y
Sbjct: 328 ARFGLTDDAKNIFEQM-GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSY 385

Query: 386 SIILTAQPAVSPF--------QVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVF 436
            ++L+A    S          +VHAH+I+T   +   ++G  L+N Y K G + +A  VF
Sbjct: 386 VVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF 445

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           EL+ EKD V+W+++++G  Q   +E A + + ++   G  P+ FT  S +++C A    +
Sbjct: 446 ELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSC-ASLGWI 504

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
             G+Q H   +K  L+  + VS+AL+ +Y++ G      +VF    + D VSWNS+I   
Sbjct: 505 MLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGAL 564

Query: 557 A-QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV------- 608
           +       +A++ F +M R       +TFI +++A +   L +   Q   +++       
Sbjct: 565 SDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDD 624

Query: 609 -----------------NE-HHIYPTMEH------YSCMVDLYSRAGMLEKAMDIINRM- 643
                            NE   I+  M        ++ M+  Y    +L KAMD++  M 
Sbjct: 625 TAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMM 684

Query: 644 ----------------PFAASATVWRTV-LAACRLISLQPHDSAIYVLLSNMYAATGHWQ 686
                             A+ AT+ R + + AC + +    D  +   L +MY+  G   
Sbjct: 685 QKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRID 744

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
             +R  +LM  R V     YSW        S ++G   H        K  +L TR+   G
Sbjct: 745 YASRFFELMPLRNV-----YSW-------NSMISGYARHGHGE----KALKLFTRMMLDG 788

Query: 747 YKPD 750
             PD
Sbjct: 789 QPPD 792


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 259/738 (35%), Positives = 410/738 (55%), Gaps = 25/738 (3%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           ++  Y  + ++   + +F      N  +WT ++  +A        L LF  M  EG+ P+
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
             T +TVL +        T   +H   IK G +    VCN L+  Y K  ++  AR VF 
Sbjct: 140 RVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M D+D++T+N+M+ G     LH +A + F  M  AG   T  TF S++ + A    L L
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             Q+H+ VL++    +  +   L+  YSKC  ++D  ++F  M E +D VS+  +I+ + 
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYA 313

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
            N      +  F +M + G       Y+ +L+   ++       Q+HA ++         
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           +G AL++ Y K G+LD A   F    EK  ++W+A++ GY Q G  E A++++  +   G
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           ++P+  TFSS+I A ++  A +  G+Q H+  I++   +++   S LV MY+K G ++ A
Sbjct: 434 LRPDRATFSSIIKA-SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 492

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
              F    +R+ +SWN++I  YA +G  K A+++F+ M       D +TF+ V+ AC+H 
Sbjct: 493 LRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHN 552

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           GL DE  +YF +M +++ I P  EHY+C++D   R G   +   ++  MPF A   +W +
Sbjct: 553 GLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612

Query: 655 VLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
           +L +CR              L  ++P D+  YV+LSN+YA  G W++ A V+K+M DR V
Sbjct: 613 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 672

Query: 701 KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           +KE+GYSW+E+K K YSF + D++ P  ++I  +L+ L   +   GYKPD +  L  +D 
Sbjct: 673 RKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDH 732

Query: 761 EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 820
           E K   L  HSERLAIAF L+ TPAG P++I+KNL  C DCH VIK+ISK+  RDI+VRD
Sbjct: 733 ELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRD 792

Query: 821 TNRFHHFKEGLCSCGDYW 838
           + RFHHFK+G+CSCGDYW
Sbjct: 793 SRRFHHFKDGVCSCGDYW 810



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/546 (28%), Positives = 281/546 (51%), Gaps = 25/546 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF  SP RN   +  ++  +       +AL+LF  +   G+     T+++VL   GC 
Sbjct: 94  QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 153

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                   +H   +K G    V V  +L+D Y +   +   RRVF +M++ + V++ +++
Sbjct: 154 VP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 208

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G ++  ++ + L+LF  M+  GI    FTFS++L V A    +    QVH +V+++   
Sbjct: 209 MGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N+L+  Y K   + D R +FD M +RD++++N ++A Y  N+        F  M
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 328

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +     + +++ +  +  ++ + +Q+H+Q++  G+  +  +   L+  YSKCG +
Sbjct: 329 QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGML 388

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A   FS  R  K  +SWTA+I+G++QNG  + A+  F  M R G+RP+  T+S I+ A
Sbjct: 389 DAAKSNFS-NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA 447

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +++      Q+H+++I++ Y+ S   G+ L++ Y K G LDEA + F+ + E++ ++W
Sbjct: 448 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 507

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-- 505
           +A+++ YA  G+ + A+K++  +   G  P+  TF SV+ AC+    A E  K FH    
Sbjct: 508 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH 567

Query: 506 --SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK----RQRKRDLVSWNSMICGYAQH 559
             SI     +  CV   L       G +   S+V K       K D + W S++     H
Sbjct: 568 QYSISPWKEHYACVIDTL-------GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIH 620

Query: 560 GHTKKA 565
           G+ + A
Sbjct: 621 GNQELA 626



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 230/490 (46%), Gaps = 46/490 (9%)

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM------------------------ 240
           ++K G +V+T   N  +   L S  +  ARA+FD M                        
Sbjct: 34  MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93

Query: 241 -------EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
                    R++ TW  M+  +       +A   F  M   G    R T  +V+ L   T
Sbjct: 94  QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 153

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
                   LH   +K G+D    +   L+ AY K G +  A ++F  M + KD V++ AM
Sbjct: 154 -----VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAM 207

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           + G  + G    A+  F  M R G+    FT+S ILT    ++      QVHA ++++  
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTS 267

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
             +  V  +LL+ Y K   LD+  ++F+ + E+D V+++ ++A YA        ++++R+
Sbjct: 268 VLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFRE 327

Query: 470 LTSEGVKPNEFTFSSVIN-ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           +   G       ++++++ A + P   V  GKQ HA  +   L +   + +AL+ MYSK 
Sbjct: 328 MQKLGFDRQVLPYATMLSVAGSLPD--VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKC 385

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G +++A   F  + ++  +SW ++I GY Q+G  ++AL++F +MRR  L  D  TF  +I
Sbjct: 386 GMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSII 445

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            A +   ++  G+Q    ++   +        S +VD+Y++ G L++A+   + MP   S
Sbjct: 446 KASSSLAMIGLGRQLHSYLIRSGYKSSVFSG-SVLVDMYAKCGCLDEALRTFDEMPERNS 504

Query: 649 ATVWRTVLAA 658
            + W  V++A
Sbjct: 505 IS-WNAVISA 513



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 143/271 (52%), Gaps = 5/271 (1%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK D     + LFD  P+R+ V YN ++  Y  +      L LF  +++LG       
Sbjct: 280 FYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLP 339

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +++L   G L D   G+Q+H + V  G A +  +  +L+D+Y +   ++  +  F + +
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E + +SWT+L++GY +N  ++  L+LF  M+  G++P+  TFS+++   +   ++    Q
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H+ +I++G +      + L+ MY K   + +A   FD M +R+SI+WN++++ Y     
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
              A + F  M   G      TF+SV+  C+
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 297/848 (35%), Positives = 475/848 (56%), Gaps = 53/848 (6%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR--------RLGLPLFGSTLSS 83
            Q +FD +P R+ + +N L+  Y +         LF+ +         R     FGS +++
Sbjct: 219  QQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITA 278

Query: 84   V-LKTCGC-LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
              L +C   + D VF R      +KSG + D+ V ++LV  + R   +++ + +F ++ E
Sbjct: 279  TSLSSCSSGVLDQVFAR-----VLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKE 333

Query: 142  SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV-- 199
             N V+   L+ G  +   ++  + +F   + +    N+ TF  +L  +A+  I    +  
Sbjct: 334  RNAVTLNGLIVGLVKQHCSEEAVGIFMGTR-DSFVVNTDTFVVLLSAVAEFSIPEDGLMR 392

Query: 200  --QVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
              +VH  +++ G  ++  ++ N L++MY K   +  A  VF  +  RD ++WN++++   
Sbjct: 393  GREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLD 452

Query: 257  TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
             N     A   +  M       +    +S +  CA+ + L   +Q+H   +K G+D D +
Sbjct: 453  QNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTS 512

Query: 317  IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA----MISGHLQNGAIDLAVNFFCQ 372
            +   L+  Y  CG   ++ +IF+ M E  D+VSW +    M+S H        +V  F  
Sbjct: 513  VSNALVKMYGDCGARSESWEIFNSMAE-HDIVSWNSIMGVMVSSHAPTAE---SVEVFSN 568

Query: 373  MTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
            M R G+ PN  T+  +L+A   +S      QVHA ++K    +  +V  AL++ Y K G 
Sbjct: 569  MMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGD 628

Query: 429  LDEAAKVFE-LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +D   ++F  +   +D V+W++M++GY   G  +  +     +       +  TFS V+N
Sbjct: 629  MDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLN 688

Query: 488  ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
            AC A  AA+E+G + HA  I+++L + + V SAL+ MYSK G I+ AS+VF    +++  
Sbjct: 689  AC-ASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEF 747

Query: 548  SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
            SWNSMI GYA+HG  +KALE+F+EM+R     D +TF+ V++AC+HAGLVD G  YF++M
Sbjct: 748  SWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMM 807

Query: 608  VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------- 660
              +H I P +EHYSC++DL  RAG L K  + INRMP   +  +WRTVL ACR       
Sbjct: 808  -EDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDR 866

Query: 661  ----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                      L+ L+P +   YVL SN YAATG W++ A+ R  M    +KKEAG SW+ 
Sbjct: 867  IDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVT 926

Query: 711  VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
            + +  ++F+AGD SHP + +IY KL  L  ++K+AGY P T + L D+++E+KE +LS H
Sbjct: 927  LGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYH 986

Query: 771  SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
            SE+LA+AF L  + +  P++I+KNLRVCGDCHT  + IS++  R I++RD+ RFHHF++G
Sbjct: 987  SEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDG 1046

Query: 831  LCSCGDYW 838
             CSCGDYW
Sbjct: 1047 KCSCGDYW 1054



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 173/584 (29%), Positives = 300/584 (51%), Gaps = 30/584 (5%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H E VK G   D+ +S  LV+LY + + +   R+VFD M E N VSWT L+SGY  + 
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 159 MNDRVLELFHRMQVEG---IKPNSFTFSTVLGVLADEG--IVATAVQVHTMVIKNGGEVV 213
           + D    +F  M  EG    +P  FTF +VL    D G  ++A AVQVH +V K      
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 214 TSVCNALISMY--LKSKMVRDARAVFDGMEDRDSITWNSMVA-----GYV--TNELHMEA 264
           T+VCNALISMY      +   A+ VFD    RD ITWN++++     GYV  T  L M  
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
               + + L   E T  + ++   L + +    +  Q+ ++VLK+G   D  + + L+ A
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATSLSSCSSG--VLDQVFARVLKSGSSSDLYVGSALVSA 314

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           +++ G +++A  IF  ++E ++ V+   +I G ++    + AV  F   TR+    N  T
Sbjct: 315 FARHGMLDEAKDIFINLKE-RNAVTLNGLIVGLVKQHCSEEAVGIF-MGTRDSFVVNTDT 372

Query: 385 YSIILTAQPAVS--------PFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKV 435
           + ++L+A    S          +VH HI++T   +   ++   L+N Y K G +D+A++V
Sbjct: 373 FVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRV 432

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F L+  +D V+W+ +++   Q G  EGA+  Y  +    + P+ F   S +++C A    
Sbjct: 433 FRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSC-ASLRL 491

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI-C 554
           +  G+Q H  ++K  L+    VS+ALV MY   G    + E+F    + D+VSWNS++  
Sbjct: 492 LTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGV 551

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
             + H  T +++EVF  M R  L  + +TF+ +++A +   +++ G+Q   +++    I 
Sbjct: 552 MVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIE 611

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                 + M   Y+++G ++    + + M     A  W ++++ 
Sbjct: 612 DNAVDNALM-SCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISG 654



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 171/648 (26%), Positives = 311/648 (47%), Gaps = 53/648 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG------LPLFGSTLSSVL 85
           + +FD   +RN V +  L+  Y    +  EA  +F  +   G       P    T  SVL
Sbjct: 111 RQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPF---TFGSVL 167

Query: 86  KTCGCLFDHV--FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG-----RRVFDD 138
           + C      +  F  QVH    K+ +A +  V  +L+ +Y    N   G     ++VFD 
Sbjct: 168 RACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMY---GNCSVGLPLQAQQVFDT 224

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG----IKPNSFTFSTVLGVLADEGI 194
               ++++W +L+S YA+         LF  M  +     ++PN  TF +++   +    
Sbjct: 225 TPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSC 284

Query: 195 VATAV-QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
            +  + QV   V+K+G      V +AL+S + +  M+ +A+ +F  +++R+++T N ++ 
Sbjct: 285 SSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIV 344

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFV----SVIKLCATTKELRL-------ARQL 302
           G V      EA   F  MG      TR +FV    + + L +   E  +        R++
Sbjct: 345 GLVKQHCSEEAVGIF--MG------TRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREV 396

Query: 303 HSQVLKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           H  +L+ G ID    +  GL+  Y+KCG ++ AS++F ++   +D VSW  +IS   QNG
Sbjct: 397 HGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCA-RDRVSWNTIISVLDQNG 455

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGT 417
             + A+  +C M +  + P+ F     L++  ++       QVH   +K   +   SV  
Sbjct: 456 FCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSN 515

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA-GYAQIGDTEGAVKIYRQLTSEGVK 476
           AL+  Y   G   E+ ++F  + E DIV+W++++    +    T  +V+++  +   G+ 
Sbjct: 516 ALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLT 575

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PN+ TF ++++A  +P + +E GKQ HA  +K        V +AL++ Y+K G+++S  +
Sbjct: 576 PNKVTFVNLLSA-LSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQ 634

Query: 537 VFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           +F     +RD VSWNSMI GY  +GH ++ ++    M   +   D  TF  V+ AC    
Sbjct: 635 LFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVA 694

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            ++ G +     +    +   +   S ++D+YS+ G ++ A  + N M
Sbjct: 695 ALERGMEMHAFGIRS-QLESDVVVESALLDMYSKCGRIDYASKVFNSM 741



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 217/435 (49%), Gaps = 22/435 (5%)

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
           +L   G  A   ++H  ++K G      + N L+++Y K   +  AR VFDGM +R++++
Sbjct: 65  LLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVS 124

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS---TFVSVIKLC--ATTKELRLARQL 302
           W  +V+GYV + +  EAF  F  M   G+E +R    TF SV++ C  A    L  A Q+
Sbjct: 125 WTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQV 184

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKC--GKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           H  V K     +  +   L+  Y  C  G    A ++F     ++D+++W A++S + + 
Sbjct: 185 HGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTT-PVRDLITWNALMSVYAKK 243

Query: 361 GAIDLAVNFFCQMTREG----VRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEK 411
           G +      F  M  +     +RPN  T+  ++TA    S       QV A ++K+    
Sbjct: 244 GYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSS 303

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              VG+AL++A+ + G+LDEA  +F  + E++ V  + ++ G  +   +E AV I+   T
Sbjct: 304 DLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMG-T 362

Query: 472 SEGVKPNEFTFSSVINAC---TAPSAAVEQGKQFHACSIKAKLNN-ALCVSSALVTMYSK 527
            +    N  TF  +++A    + P   + +G++ H   ++  L +  + +S+ LV MY+K
Sbjct: 363 RDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAK 422

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G I+ AS VF+    RD VSWN++I    Q+G  + A+  +  MR+  +       I  
Sbjct: 423 CGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISG 482

Query: 588 ITACTHAGLVDEGQQ 602
           +++C    L+  GQQ
Sbjct: 483 LSSCASLRLLTAGQQ 497


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 280/805 (34%), Positives = 433/805 (53%), Gaps = 82/805 (10%)

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
           ++ T +V  Y+      D   V + +  S  V W  L+  +      DR + +  RM   
Sbjct: 84  SLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRA 143

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G KP+ FT    L    +     +    H ++  NG E    VCNAL++MY +S  + DA
Sbjct: 144 GTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203

Query: 234 RAVFDGMEDR---DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT---RSTFVSVI 287
             VFD +  +   D I+WNS+VA +V       A + F+ M     E     RS  +S++
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIV 263

Query: 288 KL---CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
            +   CA+ K L   +++HS  ++NG   D  +   L+  Y+KCG M+DA  +F++M E 
Sbjct: 264 NILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVM-EF 322

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSP 397
           KDVVSW AM++G+ Q+G    A   F  M +E +  +  T+S ++         Q A+  
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382

Query: 398 FQ--------------------------------VHAHIIK------------TNYEKSF 413
           FQ                                 HA+ +K                +  
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 414 SVGTALLNAYVKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            V  AL++ Y K      A  +F  I   E+++V W+ M+ GYAQ GD+  A+K++ ++ 
Sbjct: 443 VVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMI 502

Query: 472 SE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL--NNALCVSSALVTMYSK 527
           S+   V PN +T S ++ AC A  +++  GKQ HA   +     ++   V++ L+ MYSK
Sbjct: 503 SKPYAVAPNAYTISCILMAC-AHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSK 561

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G++++A  VF    KR+ VSW SM+ GY  HG  K+AL++F +M++     D I+F+ +
Sbjct: 562 CGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVL 621

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+H+G+VD+G  YFDIM +++ +  + +HY+C++DL +R+G L+KA   I  MP   
Sbjct: 622 LYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEP 681

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           SA +W  +L+ACR              L+S++  +   Y L+SN+YA    W++ AR+R+
Sbjct: 682 SAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQ 741

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
           LM    +KK  G SW++ K  T SF  GD SHP S +IYS LE L  R+K  GY P+T++
Sbjct: 742 LMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNF 801

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
            L D+DDE K  +L++HSE+LA+A+GL+ T  G P++I KNLRVCGDCH+    ISK+  
Sbjct: 802 ALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVD 861

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
            +I+VRD++RFHHFK G CSCG YW
Sbjct: 862 HEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 245/535 (45%), Gaps = 66/535 (12%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+ +R      V +N L+  +  +     A+ +   + R G      TL   LK CG L 
Sbjct: 104 SVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELP 163

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE---SNVVSWTS 149
            +  G   H     +GF  +V V  +LV +Y R+ ++ED   VFD++      +V+SW S
Sbjct: 164 SYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNS 223

Query: 150 LLSGYARNKMNDRVLELFHRM------QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +++ + +       L+LF  M      +    + +  +   +L   A    +    ++H+
Sbjct: 224 IVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHS 283

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV----------- 252
             I+NG      VCNALI  Y K   ++DA  VF+ ME +D ++WN+MV           
Sbjct: 284 YAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGA 343

Query: 253 ------------------------AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
                                   AGY       EA +TF  M L G+E    T +S++ 
Sbjct: 344 AFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLS 403

Query: 289 LCATTKELRLARQLHSQVLKNGI------------DFDHNIRTGLMVAYSKCGKMEDASK 336
            CA+   L    + H+  LK  +              D  +   L+  YSKC   + A  
Sbjct: 404 ACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAART 463

Query: 337 IF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSIILTAQP 393
           IF S+ R  ++VV+WT MI G+ Q G  + A+  F +M  +   V PN +T S IL A  
Sbjct: 464 IFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACA 523

Query: 394 AVSPF----QVHAHIIKTN-YEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
            +S      Q+HA++ + + YE S + V   L++ Y K G +D A  VF+ + +++ V+W
Sbjct: 524 HLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSW 583

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           ++M++GY   G  + A+ I+ ++   G  P++ +F  ++ AC+  S  V+QG  +
Sbjct: 584 TSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH-SGMVDQGLDY 637



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 176/367 (47%), Gaps = 38/367 (10%)

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI--------------------DFD 314
           G +++ + F S++K C   + +   RQ+H +++  G+                       
Sbjct: 26  GRDVSPTHFASLLKEC---RSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSP 82

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
            ++ TG++ +Y  CG   DA  +   +      V W  ++  H++ G +D A+   C+M 
Sbjct: 83  KSLGTGVVASYLACGATSDALSVLERVVP-SPAVWWNLLVRAHIEEGRLDRAIGVSCRML 141

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           R G +P+ FT    L A   +  ++     H  I    +E +  V  AL+  Y + G L+
Sbjct: 142 RAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLE 201

Query: 431 EAAKVFELIDEK---DIVAWSAMLAGYAQIGDTEGAVKIYRQLTS------EGVKPNEFT 481
           +A+ VF+ I  K   D+++W++++A + +  +   A+ ++ ++T+         + +  +
Sbjct: 202 DASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIIS 261

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
             +++ AC A   A+ Q K+ H+ +I+        V +AL+  Y+K G+++ A  VF   
Sbjct: 262 IVNILPAC-ASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVM 320

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
             +D+VSWN+M+ GY Q G    A E+FK MR++++  D IT+  VI      G   E  
Sbjct: 321 EFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEAL 380

Query: 602 QYFDIMV 608
             F  M+
Sbjct: 381 DTFQQMI 387


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 274/838 (32%), Positives = 456/838 (54%), Gaps = 42/838 (5%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            +FD    R+ + +N ++     +  H  A++LF  +   G  +   T+ SVL  C  L  
Sbjct: 261  VFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGY 320

Query: 94   HVFGRQVHCECVKSGF----------ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ES 142
             + G+ VH   VKSG             D  + + LV +Y++  ++   RRVFD M+ + 
Sbjct: 321  GLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG 380

Query: 143  NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-----ADEGIVAT 197
            NV  W  ++ GYA+    +  L LF +M   GI P+    S +L  +     A +G+VA 
Sbjct: 381  NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVA- 439

Query: 198  AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
                H  ++K G     +VCNALIS Y KS M+ DA  VF+ M  +D+I+WNS+++G  +
Sbjct: 440  ----HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSS 495

Query: 258  NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
            N L+ EA E F  M   G EL   T +SV+  CA ++     R +H   +K G+  + ++
Sbjct: 496  NGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSL 555

Query: 318  RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
               L+  YS C   +  ++IF  M + K+VVSWTAMI+ +++ G  D       +M  +G
Sbjct: 556  ANALLDMYSNCSDWQSTNQIFRSMGQ-KNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDG 614

Query: 378  VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            +RP+ F  +  L A       +    VH + I+   EK   V  AL+  YVK   ++EA 
Sbjct: 615  IRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEAR 674

Query: 434  KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
             +F+ +  KD+++W+ ++ GY++      +  ++  +  +  +PN  T + ++ A  A  
Sbjct: 675  LIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPA-AASI 732

Query: 494  AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            +++E+G++ HA +++         S+ALV MY K G +  A  +F R  K++L+SW  MI
Sbjct: 733  SSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMI 792

Query: 554  CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
             GY  HG  K A+ +F++MR   +E D  +F  ++ AC H+GL  EG+++F  M  E+ I
Sbjct: 793  AGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKI 852

Query: 614  YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL------------ 661
             P ++HY+C+VDL SR G L++A++ I  MP    +++W ++L  CR+            
Sbjct: 853  EPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVAD 912

Query: 662  --ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
                L+P ++  YVLL+N+YA    W+   +++  +  R +++  GYSWIEV++K + F+
Sbjct: 913  KVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFI 972

Query: 720  AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
            A + +HP  N+I   L++++ R++  G+ P   Y L   DD   +  L  HS +LA+AFG
Sbjct: 973  ADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFG 1032

Query: 780  LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
            ++  P G P+++ KN +VC  CH   K ISK+  R+I++RD++RFH F+ G CSC  Y
Sbjct: 1033 VLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 274/545 (50%), Gaps = 26/545 (4%)

Query: 119 LVDLYMRTNNVEDGRRVFDDM--NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           LV  Y++  ++ + R VFD M    ++V  WTSL+S YA+       + LF +MQ  G+ 
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P++   S VL  ++  G +     +H ++ K G     +V NALI++Y +   + DA  V
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD M  RD+I+WNSM+ G  +N  H  A + F+ M   G E++  T +SV+  CA     
Sbjct: 262 FDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYG 321

Query: 297 RLARQLHSQVLKNGIDF----------DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
            + + +H   +K+G+ +          D  + + L+  Y KCG M  A ++F  M    +
Sbjct: 322 LIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGN 381

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHA 402
           V  W  ++ G+ + G  + +++ F QM   G+ P+    S +L     +S        H 
Sbjct: 382 VHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHG 441

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           +I+K  +    +V  AL++ Y K  ++ +A  VF  +  +D ++W+++++G +  G    
Sbjct: 442 YIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSE 501

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A++++ ++ ++G + +  T  SV+ AC A S     G+  H  S+K  L     +++AL+
Sbjct: 502 AIELFIRMWTQGQELDSVTLLSVLPAC-AQSRYWFAGRVVHGYSVKTGLIGETSLANALL 560

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MYS   + +S +++F+   ++++VSW +MI  Y + G   K   + +EM    +  D  
Sbjct: 561 DMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPD-- 618

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY----SCMVDLYSRAGMLEKAMD 638
             +  +T+  HA   DE  +     V+ + I   ME      + ++++Y +   +E+A  
Sbjct: 619 --VFAVTSALHAFAGDESLKQGK-SVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARL 675

Query: 639 IINRM 643
           I +R+
Sbjct: 676 IFDRV 680



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 163/664 (24%), Positives = 312/664 (46%), Gaps = 34/664 (5%)

Query: 32  QSLFDRSPQR--NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           +++FD  P +  +   +  L+  Y +    QEA++LF  ++  G+      +S VLK   
Sbjct: 156 RTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVS 215

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G  +H    K G  +   V+ +L+ +Y R   +ED  RVFD M+  + +SW S
Sbjct: 216 SLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNS 275

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ G   N  +   ++LF +M  +G + +S T  +VL   A  G       VH   +K+G
Sbjct: 276 MIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSG 335

Query: 210 ----------GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI-TWNSMVAGYVTN 258
                     G    ++ + L+ MY+K   +  AR VFD M  + ++  WN ++ GY   
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKV 395

Query: 259 ---ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
              E  +  F   + +G+A  E   S  +  I   +  ++  +A   H  ++K G     
Sbjct: 396 GEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVA---HGYIVKLGFGAQC 452

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            +   L+  Y+K   + DA  +F+ M   +D +SW ++ISG   NG    A+  F +M  
Sbjct: 453 AVCNALISFYAKSNMIGDAVLVFNRMPR-QDTISWNSVISGCSSNGLNSEAIELFIRMWT 511

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           +G   +  T   +L+  PA +  +       VH + +KT      S+  ALL+ Y     
Sbjct: 512 QGQELDSVT---LLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSD 568

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
                ++F  + +K++V+W+AM+  Y + G  +    + +++  +G++P+ F  +S ++A
Sbjct: 569 WQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHA 628

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
             A   +++QGK  H  +I+  +   L V++AL+ MY K  N+E A  +F R   +D++S
Sbjct: 629 -FAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVIS 687

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           WN++I GY+++    ++  +F +M  Q    + +T   ++ A      ++ G++     +
Sbjct: 688 WNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYAL 746

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHD 668
               +  +    + +VD+Y + G L  A  + +R+    +   W  ++A   +     H 
Sbjct: 747 RRGFLEDSYAS-NALVDMYVKCGALLVARVLFDRLT-KKNLISWTIMIAGYGMHGFGKHA 804

Query: 669 SAIY 672
            A++
Sbjct: 805 IALF 808



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 12/259 (4%)

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEK--DIVAWSAMLAGYAQIGDTEGAVKIYR 468
           K   +G  L+ AY+K G L EA  VF+ +  +  D+  W+++++ YA+ GD + AV ++R
Sbjct: 134 KGSVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFR 193

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+   GV P+    S V+  C +   ++ +G+  H    K  L  A  V++AL+ +YS+ 
Sbjct: 194 QMQCCGVSPDAHAVSCVLK-CVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRC 252

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G +E A+ VF     RD +SWNSMI G   +G    A+++F +M  Q  E   +T + V+
Sbjct: 253 GRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVL 312

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD---------LYSRAGMLEKAMDI 639
            AC   G    G+      V    ++      S + D         +Y + G +  A  +
Sbjct: 313 PACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRV 372

Query: 640 INRMPFAASATVWRTVLAA 658
            + M    +  VW  ++  
Sbjct: 373 FDAMSSKGNVHVWNLIMGG 391


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 275/758 (36%), Positives = 424/758 (55%), Gaps = 21/758 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH   + +G + D  +   LV +Y+   ++  GR++FD +    V  W  L+S YA+
Sbjct: 113 GKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAK 172

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  + LF +MQ  G+  N +TF+ VL   A  G V    +VH  V+K G    T+V
Sbjct: 173 IGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAV 232

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+LI+ Y K   V  A  +FD + + D ++WNSM+ G V N       E F  M + G 
Sbjct: 233 VNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGV 292

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E+  +T VSV+  CA    L L R LH   +K     +      L+  YSKCG +  A++
Sbjct: 293 EVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATE 352

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M +   +VSWT++I+ +++ G    A+  F +M  +GVRP+ +T + I+ A    S
Sbjct: 353 VFVKMGDTT-IVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                  VH+++IK     +  V  AL+N Y K G ++EA  VF  I  KDIV+W+ M+ 
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GY+Q      A++++  +  +  KP++ T + V+ AC A  AA+++G++ H   ++    
Sbjct: 472 GYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPAC-AGLAALDKGREIHGHILRRGYF 529

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           + L V+ ALV MY+K G +  A  +F    K+DL+SW  MI GY  HG   +A+  F EM
Sbjct: 530 SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEM 589

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R   +E D  +F  ++ AC+H+GL++EG ++F+ M NE  + P +EHY+C+VDL +R G 
Sbjct: 590 RIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGN 649

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNM 678
           L KA   I  MP     T+W  +L+ CR+                L+P ++  YV+L+N+
Sbjct: 650 LSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANV 709

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           YA    W+E  ++RK M  R  K+  G SWIEV  K   F+AG+  HPQ+ +I   L +L
Sbjct: 710 YAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKL 769

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
           + ++++  Y     YVL + DD  KE I   HSE+ A+AFG++  P G  +++ KN RVC
Sbjct: 770 TMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVC 829

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
           GDCH + K +SK  + +IV+RD+NRFHHFK+GLCSC D
Sbjct: 830 GDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 283/550 (51%), Gaps = 19/550 (3%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + +FD+        +N L+ EY +    +E+++LF  +++LG+     T + VLK   
Sbjct: 147 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 206

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L      ++VH   +K GF  +  V  SL+  Y +   VE    +FD+++E +VVSW S
Sbjct: 207 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 266

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN- 208
           +++G   N  +   LE+F +M + G++ +  T  +VL   A+ G ++    +H   +K  
Sbjct: 267 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC 326

Query: 209 -GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              EVV S  N L+ MY K   +  A  VF  M D   ++W S++A YV   L+ +A   
Sbjct: 327 FSEEVVFS--NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGL 384

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M   G      T  S++  CA +  L   R +HS V+KNG+  +  +   L+  Y+K
Sbjct: 385 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAK 444

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +E+A  +FS +  +KD+VSW  MI G+ QN   + A+  F  M ++  +P+  T + 
Sbjct: 445 CGSVEEARLVFSKI-PVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMAC 502

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L A   ++      ++H HI++  Y     V  AL++ Y K G+L  A  +F++I +KD
Sbjct: 503 VLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKD 562

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +++W+ M+AGY   G    A+  + ++   G++P+E +FS+++NAC+      E  K F+
Sbjct: 563 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFN 622

Query: 504 A----CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
           +    C ++ KL +  CV    V + ++ GN+  A +  +    K D   W  ++ G   
Sbjct: 623 SMRNECGVEPKLEHYACV----VDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRI 678

Query: 559 HGHTKKALEV 568
           H   K A +V
Sbjct: 679 HHDVKLAEKV 688


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 304/882 (34%), Positives = 480/882 (54%), Gaps = 71/882 (8%)

Query: 2    TLSPALKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQE 61
            T+  AL S+    T  PP            Q +FD +P R+ + +N L+  Y +      
Sbjct: 203  TVCNALISMYGSCTVGPPI---------LAQRVFDGTPIRDLITWNALMSVYAKKGDVAS 253

Query: 62   ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR----------------QVHCECV 105
               LF  ++R      G +   +  T     +H FG                 QV    +
Sbjct: 254  TFTLFKDMQR------GDSRIQLRPT-----EHTFGSLITAASLSSGSSAVLDQVLVWVL 302

Query: 106  KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
            KSG + D+ V ++LV  + R    ++ + +F  + + N V+   L+ G  R   ++  ++
Sbjct: 303  KSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVK 362

Query: 166  LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ----VHTMVIKNG-GEVVTSVCNAL 220
            +F   +   +  N+ T+  +L  LA+  I    ++    VH  +++ G  ++  +V N L
Sbjct: 363  IFVGTR-NTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGL 421

Query: 221  ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
            ++MY K   +  A  +F  ME  D I+WN++++    N    EA   ++ M  +    + 
Sbjct: 422  VNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSN 481

Query: 281  STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
               +S +  CA  K L   +Q+H   +K G+D D ++   L+  Y +CG M D  K+F+ 
Sbjct: 482  FALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNS 541

Query: 341  MREMKDVVSWTAMISGHLQNGAIDLA--VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
            M E  D VSW  M+ G + +    ++  V  F  M R G+ PN  T+  +L A   +S  
Sbjct: 542  MAE-HDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVL 599

Query: 399  ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAG 453
                QVHA ++K    +   V  AL++ Y K G +     +F  + D +D ++W++M++G
Sbjct: 600  ELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISG 659

Query: 454  YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
            Y   G+ + A+     +   G   +  TFS ++NAC A  AA+E+G + HA  I++ L +
Sbjct: 660  YIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNAC-ASVAALERGMELHAFGIRSHLES 718

Query: 514  ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
             + V SALV MYSK G ++ AS++F    +R+  SWNSMI GYA+HG  +KA+E+F+EM 
Sbjct: 719  DVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEML 778

Query: 574  RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
            R     D +TF+ V++AC+HAGLV+ G +YF++M  +H I P +EHYSC++DL  RAG +
Sbjct: 779  RSRESPDHVTFVSVLSACSHAGLVERGLEYFEMM-PDHGILPQIEHYSCVIDLLGRAGKI 837

Query: 634  EKAMDIINRMPFAASATVWRTVLAACR-----------------LISLQPHDSAIYVLLS 676
            +K  + I RMP   +A +WRTVL ACR                 L+ ++P +   YVL S
Sbjct: 838  DKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLAS 897

Query: 677  NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
            N +AATG W++ A+ R  M     KKEAG SW+ + +  ++F+AGD SHP + +IY KL 
Sbjct: 898  NFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLN 957

Query: 737  ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
             L   +++AGY P T Y L D+++E+KE +LS HSE+LAIAF L  + +G P++I+KNLR
Sbjct: 958  FLIQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVLTRSSSG-PIRIMKNLR 1016

Query: 797  VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            VCGDCH   + IS++  R I++RD+ RFHHFK+G CSCGDYW
Sbjct: 1017 VCGDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 172/635 (27%), Positives = 306/635 (48%), Gaps = 31/635 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR---LGLPLFGSTLSSVLKTC-- 88
           +FD  P+RN V +  L+  Y    + +EA  +F  + R    G      T  ++L+ C  
Sbjct: 118 VFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQD 177

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED--GRRVFDDMNESNVVS 146
           G      F  QVH    K+ +A +  V  +L+ +Y           +RVFD     ++++
Sbjct: 178 GGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLIT 237

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEG----IKPNSFTFSTVLGVLADEGIVATAV-QV 201
           W +L+S YA+         LF  MQ       ++P   TF +++   +     +  + QV
Sbjct: 238 WNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQV 297

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
              V+K+G      V +AL+S + +  +  +A+ +F  ++ ++++T N ++ G V  +  
Sbjct: 298 LVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFS 357

Query: 262 MEAFETFNNMGLAGA-ELTRSTFVSVIKLCA----TTKELRLARQLHSQVLKNGI-DFDH 315
            EA + F  +G     ++   T+V ++   A    + + LR+ R +H  +L+ G+ D   
Sbjct: 358 EEAVKIF--VGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKI 415

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            +  GL+  Y+KCG +E ASKIF +M E  D +SW  +IS   QNG  + AV  +  M +
Sbjct: 416 AVSNGLVNMYAKCGAIESASKIFQLM-EATDRISWNTIISALDQNGNCEEAVMHYSLMRQ 474

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
             + P+ F     L++   +       QVH   +K   +   SV   L+  Y + G + +
Sbjct: 475 SCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSD 534

Query: 432 AAKVFELIDEKDIVAWSAMLAGYA--QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             KVF  + E D V+W+ M+   A  Q   +E  VK++  +   G+ PN+ TF +++ A 
Sbjct: 535 YWKVFNSMAEHDEVSWNTMMGVMASSQTPISE-IVKVFNNMMRGGLIPNKVTFINLL-AA 592

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVS 548
            +P + +E GKQ HA  +K  +     V +AL++ Y+K G++ S   +F     +RD +S
Sbjct: 593 LSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAIS 652

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           WNSMI GY  +G+ ++A++    M       D  TF  ++ AC     ++ G +     +
Sbjct: 653 WNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGI 712

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
              H+   +   S +VD+YS+ G ++ A  + N M
Sbjct: 713 RS-HLESDVVVESALVDMYSKCGRVDYASKLFNSM 746



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 167/583 (28%), Positives = 286/583 (49%), Gaps = 28/583 (4%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
            +H E +K G   D+ +   LV+ Y +   +    +VFD+M E N VSWT L+SGY  + 
Sbjct: 82  NLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141

Query: 159 MNDRVLELFHRMQVE---GIKPNSFTFSTVLGVLADEGI--VATAVQVHTMVIKNGGEVV 213
           + +    +F  M  E   G +P SFTF T+L    D G   +  AVQVH +V K      
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201

Query: 214 TSVCNALISMYLKSKMVRD--ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           T+VCNALISMY    +     A+ VFDG   RD ITWN++++ Y         F  F +M
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261

Query: 272 GLAGAEL----TRSTFVSVIK-LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
               + +    T  TF S+I     ++    +  Q+   VLK+G   D  + + L+ A++
Sbjct: 262 QRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFA 321

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           + G  ++A  IF  +++ K+ V+   +I G ++    + AV  F   TR  V  N  TY 
Sbjct: 322 RHGLTDEAKDIFLSLKQ-KNAVTLNGLIVGLVRQDFSEEAVKIFVG-TRNTVDVNADTYV 379

Query: 387 IILTAQPAVSPFQ--------VHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFE 437
           ++L+A    S  +        VH H+++T   +   +V   L+N Y K G ++ A+K+F+
Sbjct: 380 VLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQ 439

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
           L++  D ++W+ +++   Q G+ E AV  Y  +    + P+ F   S +++C A    + 
Sbjct: 440 LMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSC-AGLKLLT 498

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G+Q H  ++K  L+    VS+ LV MY + G +    +VF    + D VSWN+M+ G  
Sbjct: 499 AGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMM-GVM 557

Query: 558 QHGHT--KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
               T   + ++VF  M R  L  + +TFI ++ A +   +++ G+Q     V +H +  
Sbjct: 558 ASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQ-VHAAVMKHGVME 616

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                + ++  Y+++G +     +   M     A  W ++++ 
Sbjct: 617 DNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISG 659



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 22/438 (5%)

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           +L +L   G   +   +H  +IK G      +CN L++ Y K   +  A  VFD M +R+
Sbjct: 67  LLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERN 126

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNM---GLAGAELTRSTFVSVIKLCATTKELRL--A 299
           +++W  +V+GYV + +  EAF  F  M     AG   T  TF ++++ C      RL  A
Sbjct: 127 AVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFA 186

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKC--GKMEDASKIFSMMREMKDVVSWTAMISGH 357
            Q+H  V K     +  +   L+  Y  C  G    A ++F     ++D+++W A++S +
Sbjct: 187 VQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGT-PIRDLITWNALMSVY 245

Query: 358 LQNGAIDLAVNFFCQM----TREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTN 408
            + G +      F  M    +R  +RP   T+  ++TA    S       QV   ++K+ 
Sbjct: 246 AKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSG 305

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                 VG+AL++A+ + G+ DEA  +F  + +K+ V  + ++ G  +   +E AVKI+ 
Sbjct: 306 CSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFV 365

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQ---GKQFHACSIKAKLNN-ALCVSSALVTM 524
             T   V  N  T+  +++A    S + E    G+  H   ++  L +  + VS+ LV M
Sbjct: 366 G-TRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNM 424

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K G IESAS++F+     D +SWN++I    Q+G+ ++A+  +  MR+  +       
Sbjct: 425 YAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFAL 484

Query: 585 IGVITACTHAGLVDEGQQ 602
           I  +++C    L+  GQQ
Sbjct: 485 ISSLSSCAGLKLLTAGQQ 502


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 281/814 (34%), Positives = 430/814 (52%), Gaps = 75/814 (9%)

Query: 43  FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHC 102
             +YN  +  +C     + A+ L     +  L L   T  SVL+ C  L     GR++H 
Sbjct: 68  ITDYNIEICRFCELGNLRRAMELINQSPKPDLEL--RTYCSVLQLCADLKSIQDGRRIHS 125

Query: 103 ECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDR 162
               +    D  + + LV +Y+   ++ +GRR+FD +    V  W  L++GYA+      
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185

Query: 163 VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS 222
            L LF RM+  GI                                               
Sbjct: 186 SLSLFKRMRELGI----------------------------------------------- 198

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
                + V  AR +FD + DRD I+WNSM++GYV+N L  +  + F  M L G     +T
Sbjct: 199 -----RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLAT 253

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
            VSV+  C+ T  L L R LH   +K     +  +   L+  YSK G +  A ++F  M 
Sbjct: 254 MVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMG 313

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
           E + VVSWT+MI+G+ + G  D++V  F +M +EG+ P+ FT + IL A       +   
Sbjct: 314 E-RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGK 372

Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            VH +I +   +    V  AL++ Y K G + +A  VF  +  KDIV+W+ M+ GY++  
Sbjct: 373 DVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNS 432

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A+ ++ ++     KPN  T + ++ AC A  AA+E+G++ H   ++   +    V+
Sbjct: 433 LPNEALNLFVEMQYNS-KPNSITMACILPAC-ASLAALERGQEIHGHILRNGFSLDRHVA 490

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +ALV MY K G +  A  +F    ++DLVSW  MI GY  HG+  +A+  F EMR   +E
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D ++FI ++ AC+H+GL+DEG  +F++M N   I P  EHY+C+VDL +RAG L KA  
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 610

Query: 639 IINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGH 684
            I  MP    AT+W  +L  CR+                L+P ++  YVLL+N+YA    
Sbjct: 611 FIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEK 670

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W+E  ++R+ +  R ++K  G SWIE+K K + F+ GD SHP +N+I   L++  TR+K+
Sbjct: 671 WEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKE 730

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            G+ P   Y L   DD  KE  L  HSE++A+AFG+++ P G  +++ KNLRVCGDCH +
Sbjct: 731 EGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEM 790

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            K +SK+ +RDI++RD+NRFHHFK+G CSC  +W
Sbjct: 791 AKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 230/441 (52%), Gaps = 8/441 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD    R+ + +N ++  Y  + L ++ L+LF  +  LG+    +T+ SV+  C   
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNT 264

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              + GR +H   +K+ F +++ ++  L+D+Y ++ N+    +VF+ M E +VVSWTS++
Sbjct: 265 GMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMI 324

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYAR  ++D  + LFH M+ EGI P+ FT +T+L   A  G++     VH  + +N  +
Sbjct: 325 AGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQ 384

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NAL+ MY K   + DA +VF  M+ +D ++WN+M+ GY  N L  EA   F  M
Sbjct: 385 SDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM 444

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
               ++    T   ++  CA+   L   +++H  +L+NG   D ++   L+  Y KCG +
Sbjct: 445 QY-NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 503

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A  +F M+ E KD+VSWT MI+G+  +G    A+  F +M   G+ P+  ++  IL A
Sbjct: 504 GLARLLFDMIPE-KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYA 562

Query: 392 ---QPAVSPFQVHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIV 445
                 +       ++++ N   E        +++   + G L +A K  +++  E D  
Sbjct: 563 CSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDAT 622

Query: 446 AWSAMLAGYAQIGDTEGAVKI 466
            W A+L G     D + A K+
Sbjct: 623 IWGALLCGCRIYHDVKLAEKV 643


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/738 (35%), Positives = 410/738 (55%), Gaps = 25/738 (3%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           ++  Y  + ++   + +F      N  +WT ++  +A        L LF  M  EG+ P+
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
             T +TVL +        T   +H   IK G +    VCN L+  Y K  ++  AR VF 
Sbjct: 140 RVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M D+D++T+N+M+ G     LH +A + F  M  AG   T  TF S++ + A    L L
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             Q+H+ VL++    +  +   L+  YSKC  ++D  ++F  M E +D VS+  +I+ + 
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYA 313

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
            N      +  F +M + G       Y+ +L+   ++       Q+HA ++         
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           +G AL++ Y K G+LD A   F    EK  ++W+A++ GY Q G  E A++++  +   G
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           ++P+  TFSS+I A ++  A +  G+Q H+  I++   +++   S LV MY+K G ++ A
Sbjct: 434 LRPDRATFSSIIKASSS-LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 492

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
              F    +R+ +SWN++I  YA +G  K A+++F+ M       D +TF+ V+ AC+H 
Sbjct: 493 LRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHN 552

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           GL DE  +YF +M +++ I P  EHY+C++D   R G   +   ++  MPF A   +W +
Sbjct: 553 GLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 612

Query: 655 VLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
           +L +CR              L  ++P D+  YV+LSN+YA  G W++ A V+K+M DR V
Sbjct: 613 ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 672

Query: 701 KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           +KE+GYSW+E+K K YSF + D++ P  ++I  +L+ L   +   GYKPD +  L  +D 
Sbjct: 673 RKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDH 732

Query: 761 EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 820
           E K   L  HSERLAIAF L+ TPAG P++I+KNL  C DCH VIK+ISK+  RDI+VRD
Sbjct: 733 ELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRD 792

Query: 821 TNRFHHFKEGLCSCGDYW 838
           + RFHHFK+G+CSCGDYW
Sbjct: 793 SRRFHHFKDGVCSCGDYW 810



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 155/546 (28%), Positives = 281/546 (51%), Gaps = 25/546 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF  SP RN   +  ++  +       +AL+LF  +   G+     T+++VL   GC 
Sbjct: 94  QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 153

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                   +H   +K G    V V  +L+D Y +   +   RRVF +M++ + V++ +++
Sbjct: 154 VP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 208

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G ++  ++ + L+LF  M+  GI    FTFS++L V A    +    QVH +V+++   
Sbjct: 209 MGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSV 268

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N+L+  Y K   + D R +FD M +RD++++N ++A Y  N+        F  M
Sbjct: 269 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 328

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +     + +++ +  +  ++ + +Q+H+Q++  G+  +  +   L+  YSKCG +
Sbjct: 329 QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGML 388

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A   FS  R  K  +SWTA+I+G++QNG  + A+  F  M R G+RP+  T+S I+ A
Sbjct: 389 DAAKSNFS-NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA 447

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +++      Q+H+++I++ Y+ S   G+ L++ Y K G LDEA + F+ + E++ ++W
Sbjct: 448 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 507

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-- 505
           +A+++ YA  G+ + A+K++  +   G  P+  TF SV+ AC+    A E  K FH    
Sbjct: 508 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH 567

Query: 506 --SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK----RQRKRDLVSWNSMICGYAQH 559
             SI     +  CV   L       G +   S+V K       K D + W S++     H
Sbjct: 568 QYSISPWKEHYACVIDTL-------GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIH 620

Query: 560 GHTKKA 565
           G+ + A
Sbjct: 621 GNQELA 626



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 230/490 (46%), Gaps = 46/490 (9%)

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM------------------------ 240
           ++K G +V+T   N  +   L S  +  ARA+FD M                        
Sbjct: 34  MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93

Query: 241 -------EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
                    R++ TW  M+  +       +A   F  M   G    R T  +V+ L   T
Sbjct: 94  QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 153

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
                   LH   +K G+D    +   L+ AY K G +  A ++F  M + KD V++ AM
Sbjct: 154 -----VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAM 207

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           + G  + G    A+  F  M R G+    FT+S ILT    ++      QVHA ++++  
Sbjct: 208 MMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTS 267

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
             +  V  +LL+ Y K   LD+  ++F+ + E+D V+++ ++A YA        ++++R+
Sbjct: 268 VLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFRE 327

Query: 470 LTSEGVKPNEFTFSSVIN-ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           +   G       ++++++ A + P   V  GKQ HA  +   L +   + +AL+ MYSK 
Sbjct: 328 MQKLGFDRQVLPYATMLSVAGSLPD--VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKC 385

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G +++A   F  + ++  +SW ++I GY Q+G  ++AL++F +MRR  L  D  TF  +I
Sbjct: 386 GMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSII 445

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            A +   ++  G+Q    ++   +        S +VD+Y++ G L++A+   + MP   S
Sbjct: 446 KASSSLAMIGLGRQLHSYLIRSGYKSSVFSG-SVLVDMYAKCGCLDEALRTFDEMPERNS 504

Query: 649 ATVWRTVLAA 658
            + W  V++A
Sbjct: 505 IS-WNAVISA 513



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 143/271 (52%), Gaps = 5/271 (1%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK D     + LFD  P+R+ V YN ++  Y  +      L LF  +++LG       
Sbjct: 280 FYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLP 339

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +++L   G L D   G+Q+H + V  G A +  +  +L+D+Y +   ++  +  F + +
Sbjct: 340 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 399

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E + +SWT+L++GY +N  ++  L+LF  M+  G++P+  TFS+++   +   ++    Q
Sbjct: 400 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 459

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H+ +I++G +      + L+ MY K   + +A   FD M +R+SI+WN++++ Y     
Sbjct: 460 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 519

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
              A + F  M   G      TF+SV+  C+
Sbjct: 520 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/793 (34%), Positives = 437/793 (55%), Gaps = 41/793 (5%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD-----LYMRTNNVEDGR 133
           S  +++L  C  L     G++VH   ++    +D     SL++     +Y+R    +   
Sbjct: 11  SACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLAL 70

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA--- 190
            VFD M + NVV+WTSL+S +         + LF +M + G+ P+  TF+++L   +   
Sbjct: 71  DVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRE 130

Query: 191 ---DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
              DEG      +VH+ +++ G E    V N ++ MY K   V  A  VFD ++D +  +
Sbjct: 131 RNLDEG-----KRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFS 185

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           W  ++A Y  N   ME     + M  AG +    TF +V+  C     L  A+ LH+  +
Sbjct: 186 WTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATI 245

Query: 308 KN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            + G+D D  + T L+  Y KCG +E+A  +F  + + KD+VSW++MI+   Q+G    A
Sbjct: 246 SSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQI-DNKDIVSWSSMIAAFAQSGQAKSA 304

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNA 422
           +     M  EGVRPN  T+  +L A  ++  FQ    +HA I++  Y     + +AL+  
Sbjct: 305 IQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKM 364

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y   G ++ A  +FE   E+D+V+WS+M+AGY+Q      A+ ++R++  +GV+PN  TF
Sbjct: 365 YCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTF 424

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            S I+AC A   A+ +G Q H       L+  + V++ALV +Y K G +E A  VF   +
Sbjct: 425 VSAIDAC-AGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMK 483

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           K++L++W S+   Y Q+GH  ++L++   M  Q ++ DGI F+ ++ +C +AG + +G  
Sbjct: 484 KKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLH 543

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--- 659
           Y+++M  +  I P +EH  CMVD+  RAG LE A  +IN M F  S+  W  +L AC   
Sbjct: 544 YYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKF-ESSLAWMMLLTACKAH 602

Query: 660 -----------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                      ++  L+P ++  YVLLS+++ A G W+     R+ M+ R V++  G S 
Sbjct: 603 NDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSS 662

Query: 709 IEVKNKTYSFLAGD--ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV-LQDIDDEHKEA 765
           IE+ ++ + F+A    + H    +I++ LE+L   ++ AGY PD + V L+D+++  KE 
Sbjct: 663 IEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVEEGGKEN 722

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
            +  HSE LA+  G+++TPAG PL+I KNLR+C DCH   K +SKL  R I VRD  R H
Sbjct: 723 AVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHH 782

Query: 826 HFKEGLCSCGDYW 838
           HF+ G+CSCGDYW
Sbjct: 783 HFENGVCSCGDYW 795



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 226/476 (47%), Gaps = 15/476 (3%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++FD     N   +  ++  Y ++    E L L   + + G+   G T ++VL  C  + 
Sbjct: 173 NVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVG 232

Query: 93  DHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                + +H   + S G  RD  V T+L++LY +   +E+   VF  ++  ++VSW+S++
Sbjct: 233 ALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMI 292

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + +A++      ++L   M +EG++PN+ TF  VL  +          ++H  +++ G  
Sbjct: 293 AAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYS 352

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + +AL+ MY     V  AR++F+   +RD ++W+SM+AGY  NE    A   F  M
Sbjct: 353 DDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREM 412

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            + G +    TFVS I  CA    LR   QLH +V   G+D D  + T L+  Y KCG++
Sbjct: 413 EVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRL 472

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E+A  +F  M++ K++++WT++   + QNG    ++     M  +G++P+G  +  IL +
Sbjct: 473 EEAEAVFLGMKK-KNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVS 531

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTA------LLNAYVKKGILDEAAKVFELIDEKDIV 445
                      H       + F +  A      +++   + G L+ A ++   +  +  +
Sbjct: 532 CNYAGQMSKGLHYYNL-MTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSL 590

Query: 446 AWSAMLAGYAQIGDT----EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
           AW  +L       DT      A KI+ QL  +   P     SSV  A  +  AA E
Sbjct: 591 AWMMLLTACKAHNDTARAARAAEKIF-QLEPKNATPY-VLLSSVFCAAGSWEAAEE 644



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 111/219 (50%), Gaps = 3/219 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F+ S +R+ V ++ ++  Y ++     AL+LF  +   G+     T  S +  C  +
Sbjct: 375 RSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGV 434

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H      G  +DV V+T+LV+LY +   +E+   VF  M + N+++WTS+ 
Sbjct: 435 GALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIA 494

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             Y +N    R L+L H M+++G+KP+   F  +L      G ++  +  + ++ ++ G 
Sbjct: 495 MAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFG- 553

Query: 212 VVTSV--CNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
           +  +V  C  ++ +  ++  +  A  + + M+   S+ W
Sbjct: 554 IAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAW 592


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 275/790 (34%), Positives = 438/790 (55%), Gaps = 23/790 (2%)

Query: 69  IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN 128
           +R LG+P    T   VLK CG + D   G ++H   +K G+   V V+ SLV +Y + N+
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 129 VEDGRRVFDDMNESN-VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
           +   R++FD MNE N VVSW S++S Y+ N      L LF  MQ  G+  N++T    L 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
              D       +++H  ++K+   +   V NAL++M+++   +  A  +FD ++++D+IT
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WNSM+AG+  N L+ EA + F  +  A  +    + +S++        L   +++H+  +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           KN +D +  I   L+  YSKC  +  A  +F  M   KD++SWT +I+ + QN     A+
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMIN-KDLISWTTVIAAYAQNNCHTEAL 299

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
               ++  +G+  +       L A   +       +VH + +K        +   +++ Y
Sbjct: 300 KLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVY 358

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
              G ++ A ++FE I  KD+V+W++M++ Y   G    A+ ++  +    V+P+  T  
Sbjct: 359 ADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLV 418

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
           S I +  A  +A+ +GK+ H    +          ++LV MY+  G++E+A +VF   R 
Sbjct: 419 S-ILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRS 477

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           + LV W +MI  Y  HG  K A+E+F  M  Q L  D ITF+ ++ AC+H+GL++EG++ 
Sbjct: 478 KSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--- 660
            + M  ++ + P  EHY+C+VDL  RA  LE+A   +  M    +A VW   L ACR   
Sbjct: 538 LETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHS 597

Query: 661 -----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
                      L+ L P     YVL+SN++AA+G W++   VR  M    +KK  G SWI
Sbjct: 598 NKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWI 657

Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILS 768
           EV NK ++FL  D SHP+S +IY KL +++ +L K+ GY P T  VL ++  E K  +L 
Sbjct: 658 EVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLY 717

Query: 769 QHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            HSERLAIA+GL++T  G P++I KNLRVC DCHT  KL+SK   R+++VRD +RFHHF+
Sbjct: 718 GHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFE 777

Query: 829 EGLCSCGDYW 838
           +G+CSCGD+W
Sbjct: 778 DGVCSCGDFW 787



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 243/476 (51%), Gaps = 8/476 (1%)

Query: 32  QSLFDRSPQRN-FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + LFDR  +RN  V +N ++  Y  +    EAL LF  +++ G+     TL + L+ C  
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                 G ++H   +KS    DV V+ +LV +++R   +    R+FD+++E + ++W S+
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++G+ +N + +  L+ F  +Q   +KP+  +  ++L      G +    ++H   +KN  
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWL 244

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    + N LI MY K   V  A  VFD M ++D I+W +++A Y  N  H EA +    
Sbjct: 245 DSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRK 304

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +   G ++      S +  C+  + L  A+++H   LK G+  D  ++  ++  Y+ CG 
Sbjct: 305 VQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGN 363

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +  A+++F  ++  KDVVSWT+MIS ++ NG  + A+  F  M    V P+  T   IL+
Sbjct: 364 INYATRMFESIK-CKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILS 422

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A  ++S      ++H  I +  +    S   +L++ Y   G L+ A KVF     K +V 
Sbjct: 423 AAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVL 482

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           W+ M+  Y   G  + AV+++  +  + + P+  TF +++ AC+  S  + +GK+ 
Sbjct: 483 WTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACS-HSGLINEGKRL 537


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 283/809 (34%), Positives = 453/809 (55%), Gaps = 34/809 (4%)

Query: 54  CRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDV 113
           CR    +EAL L LG   +    +G+    VL+ C  +     G++ H     S   RD 
Sbjct: 72  CRSGDLEEALGL-LGSDGVDDRSYGA----VLQLCSEVRSLEGGKRAHFLVRASSLGRDG 126

Query: 114 --NV-STSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSLLSGYAR-NKMNDRVLELFH 168
             NV    LV +Y++  ++E+ RRVFD+M + S+V  WT+L+SGYA+   + + VL LF 
Sbjct: 127 MDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVL-LFR 185

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           +M   G++P+++T S VL  +A  G +     VH ++ K G     +V NAL++ Y KS 
Sbjct: 186 KMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSN 245

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
             +DA  VFDGM  RD I+WNSM++G  +N L+ +A E F  M L G EL  +T +SV+ 
Sbjct: 246 RTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLP 305

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            CA    L L R +H   +K G     ++   L+  YS C      +KIF  M + K+VV
Sbjct: 306 ACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQ-KNVV 364

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           SWTAMI+ + + G  D     F +M  EG RP+ F  +  L A       +    VH + 
Sbjct: 365 SWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYA 424

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           I+   EK  +V  AL+  YVK G ++EA  +F+ +  KD+++W+ ++ GY++      A 
Sbjct: 425 IRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAF 484

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++ ++  + ++PN  T + ++ A  A  +++E+G++ HA +++        V++AL+ M
Sbjct: 485 SLFTEMLLQ-LRPNAVTMTCILPA-AASLSSLERGREMHAYALRRGYLEDDFVANALIDM 542

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K G +  A  +F R   ++L+SW  M+ GY  HG  + A+ +F++MR   +  D  +F
Sbjct: 543 YVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASF 602

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             ++ AC+H+GL DEG ++FD M  EH I P ++HY+CMVDL    G L++A + I+ MP
Sbjct: 603 SAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMP 662

Query: 645 FAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERAR 690
               +++W ++L  CR+                L+P ++  YVLL+N+YA    W+   +
Sbjct: 663 IEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRK 722

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           ++  +  R +++  G SWIE K K + F+A + +HPQ  +I   L E++ R+++ G+ P 
Sbjct: 723 LKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPK 782

Query: 751 TSYVLQDIDDE-HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLIS 809
             Y L   D+  H EA L  HS +LA+AFG++    G  +++ KN RVC  CH   K IS
Sbjct: 783 KKYALMGADNAVHGEA-LCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFIS 841

Query: 810 KLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           K+  R+I++RD+NRFHHF++G CSC  YW
Sbjct: 842 KMCSREIILRDSNRFHHFEQGRCSCRGYW 870



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 264/543 (48%), Gaps = 8/543 (1%)

Query: 32  QSLFDRSPQRNFVE-YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +FD  PQ + V  +  L+  Y +    +E + LF  +   G+     T+S VLK    
Sbjct: 149 RRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAG 208

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L     G  VH    K GF     V  +L+  Y ++N  +D   VFD M   +V+SW S+
Sbjct: 209 LGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSM 268

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SG   N + D+ +ELF RM +EG + +S T  +VL   A+  ++     VH   +K G 
Sbjct: 269 ISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGF 328

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              TS+ N L+ MY      R    +F  M  ++ ++W +M+  Y    L+ +    F  
Sbjct: 329 ISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQE 388

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           MGL G         S +   A  + L+  + +H   ++NG++    +   LM  Y KCG 
Sbjct: 389 MGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGN 448

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ME+A  IF  +   KD++SW  +I G+ +N   + A + F +M  + +RPN  T + IL 
Sbjct: 449 MEEAKLIFDGVVS-KDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILP 506

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A  ++S      ++HA+ ++  Y +   V  AL++ YVK G L  A ++F+ +  K++++
Sbjct: 507 AAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLIS 566

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ M+AGY   G    A+ ++ Q+   G+ P+  +FS+++ AC+      E  + F A  
Sbjct: 567 WTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMR 626

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
            + K+   L   + +V +    GN++ A E       + D   W S++ G   H + K A
Sbjct: 627 KEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLA 686

Query: 566 LEV 568
            EV
Sbjct: 687 EEV 689



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 221/442 (50%), Gaps = 19/442 (4%)

Query: 26  FYSKKDQS-----LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY+K +++     +FD  P R+ + +N ++     + L+ +A+ LF+ +   G  L  +T
Sbjct: 240 FYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSAT 299

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L SVL  C  L     GR VH   VK+GF    +++  L+D+Y   ++     ++F +M 
Sbjct: 300 LLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMV 359

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           + NVVSWT++++ Y R  + D+V  LF  M +EG +P+ F  ++ L   A   ++     
Sbjct: 360 QKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKS 419

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH   I+NG E V +V NAL+ MY+K   + +A+ +FDG+  +D I+WN+++ GY  N L
Sbjct: 420 VHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNL 479

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EAF  F  M L        T   ++   A+   L   R++H+  L+ G   D  +   
Sbjct: 480 ANEAFSLFTEM-LLQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANA 538

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y KCG +  A ++F  +   K+++SWT M++G+  +G    A+  F QM   G+ P
Sbjct: 539 LIDMYVKCGALLLARRLFDRLSN-KNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAP 597

Query: 381 NGFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           +  ++S IL A               A   +   E      T +++  +  G L EA   
Sbjct: 598 DAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEA--- 654

Query: 436 FELID----EKDIVAWSAMLAG 453
           +E ID    E D   W ++L G
Sbjct: 655 YEFIDSMPIEPDSSIWVSLLRG 676


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 271/766 (35%), Positives = 434/766 (56%), Gaps = 28/766 (3%)

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
           ++ +  H + + +  + D  V+T LV  Y    ++E  R VFD   +   +   ++L GY
Sbjct: 46  IWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGY 105

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            ++      LELF  M+   ++ +S + +  L   A        +++ +  ++ G E   
Sbjct: 106 LQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNR 165

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V +++IS  +K   + +A+ VFDGM ++D + WNS++ GYV       AF+ F  M  +
Sbjct: 166 FVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGS 225

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G + +  T  S+I+ C     L+L + +H  VL  G+  D  + T  +  YSK G +E A
Sbjct: 226 GIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESA 285

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             +F  M   +++VSW AMISG ++NG +  + + F ++ R      GF  + I++    
Sbjct: 286 RWVFYKM-PTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRS---SGGFDLTTIVSLLQG 341

Query: 395 VSPFQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
            S          +H   I++ +E +  + TA+++ Y K G L +A  VF  + +++++ W
Sbjct: 342 CSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITW 400

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AML G AQ G  E A++++ Q+  EG+  N  TF S++++C A   ++++G+  H    
Sbjct: 401 TAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSC-AHLGSLKRGRSIHGHLF 459

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKAL 566
           +      +   +ALV MY+K G I  A  +F      +D+V WNSMI GY  HGH  +A+
Sbjct: 460 RLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAV 519

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            ++ +M  + L+ +  TF+ +++AC+H+ LV++G   F+ M  +H+I P  +HY+C+VDL
Sbjct: 520 GIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDL 579

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
            SRAG  E+A  +I +MPF     V   +L+ CR              L++L   +  IY
Sbjct: 580 LSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIY 639

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           ++LSN+YA    W +   +R LM +R +KK  GYS +E  N  ++F AGD SHP   +IY
Sbjct: 640 IMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIY 699

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
             LE L + ++ +GY PDTS VL+D+D+E K  +L  HSERLAIAFGL+ TPAG+ ++I 
Sbjct: 700 HFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRIT 759

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLRVCGDCHTV K ISK+ +R+I+VRD NRFHHF  G CSCGDYW
Sbjct: 760 KNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 262/515 (50%), Gaps = 13/515 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+  Q   +  N +L  Y +   ++E L LF  +R   L +   + +  LK C    D
Sbjct: 86  VFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLD 145

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           +  G ++    V+ G  ++  V +S++   ++   + + +RVFD M   +VV W S++ G
Sbjct: 146 YEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGG 205

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y +    D   +LF  M   GIKP+  T ++++      G +     +H  V+  G    
Sbjct: 206 YVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGND 265

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  + + MY K   +  AR VF  M  R+ ++WN+M++G V N L  E+F+ F+ +  
Sbjct: 266 ILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVR 325

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGKM 331
           +      +T VS+++ C+ T  L   + LH   +++   F+ N  + T ++  YSKCG +
Sbjct: 326 SSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS---FESNLILSTAIVDLYSKCGSL 382

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A+ +F+ M++ ++V++WTAM+ G  QNG  + A+  F QM  EG+  N  T+  ++ +
Sbjct: 383 KQATFVFNRMKD-RNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHS 441

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVA 446
              +   +    +H H+ +  +       TAL++ Y K G ++ A ++F      KD+V 
Sbjct: 442 CAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVL 501

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHAC 505
           W++M+ GY   G    AV IY ++  EG+KPN+ TF S+++AC+  S  VEQG   F++ 
Sbjct: 502 WNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSH-SRLVEQGISLFNSM 560

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
                +       + LV + S+ G  E A  + ++
Sbjct: 561 ERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEK 595



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 184/363 (50%), Gaps = 7/363 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +FD  P ++ V +N ++  Y +      A  LF  +   G+     T++S+++ CG +
Sbjct: 185 QRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGI 244

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G+ +H   +  G   D+ V TS VD+Y +  ++E  R VF  M   N+VSW +++
Sbjct: 245 GNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMI 304

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL---ADEGIVATAVQVHTMVIKN 208
           SG  RN +     +LFHR+         F  +T++ +L   +    +AT   +H   I++
Sbjct: 305 SGCVRNGLVGESFDLFHRLVRS---SGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS 361

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             E    +  A++ +Y K   ++ A  VF+ M+DR+ ITW +M+ G   N    +A   F
Sbjct: 362 -FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLF 420

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G      TFVS++  CA    L+  R +H  + + G  FD    T L+  Y+KC
Sbjct: 421 AQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKC 480

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           GK+  A +IFS     KDVV W +MI+G+  +G    AV  + +M  EG++PN  T+  +
Sbjct: 481 GKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSL 540

Query: 389 LTA 391
           L+A
Sbjct: 541 LSA 543



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 189/365 (51%), Gaps = 10/365 (2%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           F+S+++   ++K L   +  H+Q++ N +  D  + T L+ AYS    +E A  +F    
Sbjct: 34  FLSLLR--ESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFF 91

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHA 402
           + K ++   AM+ G+LQ+G     +  F  M    +  +  + +  L A  +   +++  
Sbjct: 92  QPKGLLC-NAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGM 150

Query: 403 HIIKTNYEKSFS----VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            II +  EK       VG+++++  VK G + EA +VF+ +  KD+V W++++ GY Q G
Sbjct: 151 EIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAG 210

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             + A +++ ++   G+KP+  T +S+I AC      ++ GK  H   +   L N + V 
Sbjct: 211 CFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGI-GNLKLGKCMHGYVLGLGLGNDILVL 269

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           ++ V MYSK G+IESA  VF +   R+LVSWN+MI G  ++G   ++ ++F  + R    
Sbjct: 270 TSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGG 329

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
           FD  T + ++  C+    +  G+      +        +   + +VDLYS+ G L++A  
Sbjct: 330 FDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILS--TAIVDLYSKCGSLKQATF 387

Query: 639 IINRM 643
           + NRM
Sbjct: 388 VFNRM 392



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 89/174 (51%), Gaps = 1/174 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+   +F+R   RN + +  +L    ++   ++AL LF  ++  G+     T  S++ +C
Sbjct: 383 KQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSC 442

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVVSW 147
             L     GR +H    + GFA D+   T+LVD+Y +   +    R+F   + S +VV W
Sbjct: 443 AHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLW 502

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            S+++GY  +    + + ++H+M  EG+KPN  TF ++L   +   +V   + +
Sbjct: 503 NSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISL 556


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 257/672 (38%), Positives = 407/672 (60%), Gaps = 53/672 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NAL+S    ++++ D  A+F  M  RD +++N+++AG+     H +A   +  +  A + 
Sbjct: 76  NALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSS 135

Query: 278 L--TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK-------- 327
           +  +R T  +++   +   +  L +Q H Q+L+ G   +  + + L+  Y+K        
Sbjct: 136 VRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAK 195

Query: 328 -----------------------CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
                                  C  +E+A ++F +M + +D ++WT M++G  QNG   
Sbjct: 196 RAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTD-RDSITWTTMVTGFTQNGLES 254

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALL 420
            A+  F +M  +G+  + +T+  ILTA  A+S      Q+HA+II+T Y+ +  VG+AL+
Sbjct: 255 EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALV 314

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + Y K   +  A  VF  +  K+I++W+A++ GY Q G +E AV+++ ++  +G+ P+++
Sbjct: 315 DMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDY 374

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T  SVI++C A  A++E+G QFH  ++ + L + + VS+ALVT+Y K G+IE A  +F  
Sbjct: 375 TLGSVISSC-ANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDE 433

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
               D VSW +++ GYAQ G  K+ +++F++M  + ++ DG+TFIGV++AC+ AG V++G
Sbjct: 434 MSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKG 493

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
           + YF  M  +H I P  +HY+CM+DLYSR+G L++A + I +MP    A  W T+L+ACR
Sbjct: 494 RSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACR 553

Query: 661 L--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
           L              + + P + A YVLL +M+AA G W E A++R+ M DR+VKKE G 
Sbjct: 554 LRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGC 613

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SWI+ KNK + F A D SHP S  IY KLE L++++ + GYKPD S VL D+ D  K  +
Sbjct: 614 SWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHM 673

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           +S HSE+LAIAFGL+  P   P++IVKNLRVC DCH   K ISK+  RDI+VRD  RFH 
Sbjct: 674 VSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHK 733

Query: 827 FKEGLCSCGDYW 838
           F +G+CSCGD+W
Sbjct: 734 FSDGVCSCGDFW 745



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 243/532 (45%), Gaps = 76/532 (14%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI--- 175
           L+  Y +       RRVFD M   N+ ++ +LLS  A  ++   +  LF  M    I   
Sbjct: 47  LLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSY 106

Query: 176 ------------------------------KPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
                                         +P+  T ST++   +  G  A   Q H  +
Sbjct: 107 NAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQI 166

Query: 206 IKNGGEVVTSVCNALISMY-------------------------------LKSKMVRDAR 234
           ++ G      V + L+ MY                               L+ KMV +AR
Sbjct: 167 LRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEAR 226

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            +F+ M DRDSITW +MV G+  N L  EA E F  M   G  + + TF S++  C    
Sbjct: 227 RLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALS 286

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            L   +Q+H+ +++   D +  + + L+  YSKC  ++ A  +F  M   K+++SWTA+I
Sbjct: 287 ALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM-TCKNIISWTALI 345

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE 410
            G+ QNG  + AV  F +M R+G+ P+ +T   ++++   ++      Q H   + +   
Sbjct: 346 VGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLM 405

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
              +V  AL+  Y K G +++A ++F+ +   D V+W+A+++GYAQ G  +  + ++ ++
Sbjct: 406 HYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKM 465

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKG 529
            ++GVKP+  TF  V++AC+  +  VE+G+  FH+      +       + ++ +YS+ G
Sbjct: 466 LAKGVKPDGVTFIGVLSACSR-AGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSG 524

Query: 530 NIESASEVFKRQRKR-DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
            ++ A E  K+     D + W +++      G     +E+ K      LE D
Sbjct: 525 KLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD----MEIGKWAAENLLEID 572



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 226/472 (47%), Gaps = 46/472 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLKTCG 89
           ++LF    QR+ V YN ++  +     H +A+ ++L + +    +  S  T+S+++    
Sbjct: 92  EALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAAS 151

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV---- 145
            L D   G+Q HC+ ++ GF  +  V + LVD+Y + + V D +R FD+++  NVV    
Sbjct: 152 ALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNT 211

Query: 146 ---------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
                                      +WT++++G+ +N +    LE+F RM+ +GI  +
Sbjct: 212 MITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAID 271

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
            +TF ++L        +    Q+H  +I+   +    V +AL+ MY K + ++ A  VF 
Sbjct: 272 QYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFR 331

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M  ++ I+W +++ GY  N    EA   F+ M   G +    T  SVI  CA    L  
Sbjct: 332 RMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEE 391

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             Q H   L +G+     +   L+  Y KCG +EDA ++F  M    D VSWTA++SG+ 
Sbjct: 392 GAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVSGYA 450

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNY-----E 410
           Q G     ++ F +M  +GV+P+G T+  +L+A      V   + + H ++ ++     +
Sbjct: 451 QFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPID 510

Query: 411 KSFSVGTALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
             +   T +++ Y + G L EA + + ++    D + W  +L+     GD E
Sbjct: 511 DHY---TCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDME 559



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 167/334 (50%), Gaps = 1/334 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+    R+ + +  ++  + ++ L  EAL +F  +R  G+ +   T  S+L  CG L  
Sbjct: 228 LFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSA 287

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   +++ +  +V V ++LVD+Y +  +++    VF  M   N++SWT+L+ G
Sbjct: 288 LEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVG 347

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y +N  ++  + +F  MQ +GI P+ +T  +V+   A+   +    Q H + + +G    
Sbjct: 348 YGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHY 407

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +V NAL+++Y K   + DA  +FD M   D ++W ++V+GY       E  + F  M  
Sbjct: 408 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLA 467

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            G +    TF+ V+  C+    +   R   HS    +GI    +  T ++  YS+ GK++
Sbjct: 468 KGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLK 527

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +A +    M    D + W  ++S     G +++ 
Sbjct: 528 EAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIG 561



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 2/228 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  +++F R   +N + +  L+  Y ++   +EA+ +F  ++R G+     TL SV+ +C
Sbjct: 324 KLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSC 383

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G Q HC  + SG    + VS +LV LY +  ++ED  R+FD+M+  + VSWT
Sbjct: 384 ANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 443

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           +L+SGYA+       ++LF +M  +G+KP+  TF  VL   +  G V       H+M   
Sbjct: 444 ALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKD 503

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
           +G   +      +I +Y +S  +++A      M    D+I W ++++ 
Sbjct: 504 HGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 262/741 (35%), Positives = 422/741 (56%), Gaps = 77/741 (10%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
             ++  Y+R    E  R++FD+M E ++VSW  ++ GY RN+   +  ELF       I 
Sbjct: 99  NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFE------IM 152

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC--NALISMYLKSKMVRDAR 234
           P                                      VC  N ++S Y ++  V DAR
Sbjct: 153 PER-----------------------------------DVCSWNTMLSGYAQNGCVDDAR 177

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCA 291
           +VFD M +++ ++WN++++ YV N    EA   F++  N  L         FV       
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK------ 231

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
             K++  ARQ    +    +   + I TG    Y++ GK+++A ++F     ++DV +WT
Sbjct: 232 -KKKIVEARQFFDSMNVRDVVSWNTIITG----YAQSGKIDEARQLFDE-SPVQDVFTWT 285

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK 411
           AM+SG++QN  ++ A   F +M       N  +++ +L         ++   +      +
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR 341

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           + S    ++  Y + G + EA  +F+ + ++D V+W+AM+AGY+Q G +  A++++ Q+ 
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
            EG + N  +FSS ++ C A   A+E GKQ H   +K        V +AL+ MY K G+I
Sbjct: 402 REGGRLNRSSFSSALSTC-ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           E A+++FK    +D+VSWN+MI GY++HG  + AL  F+ M+R+ L+ D  T + V++AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           +H GLVD+G+QYF  M  ++ + P  +HY+CMVDL  RAG+LE A +++  MPF   A +
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580

Query: 652 WRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
           W T+L A R              + +++P +S +YVLLSN+YA++G W +  ++R  M D
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
           + VKK  GYSWIE++NKT++F  GD  HP+ ++I++ LEEL  R+K AGY   TS VL D
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           +++E KE ++  HSERLA+A+G++   +G P++++KNLRVC DCH  IK ++++  R I+
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           +RD NRFHHFK+G CSCGDYW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 219/440 (49%), Gaps = 31/440 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FDR P++N V +N LL  Y ++S  +EA  LF       L  +   L   +K     
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI- 235

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              V  RQ       S   RDV    +++  Y ++  +++ R++FD+    +V +WT+++
Sbjct: 236 ---VEARQF----FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAVQVHTMVIKNGG 210
           SGY +N+M +   ELF +M     + N  +++ +L G +  E +         M  +N  
Sbjct: 289 SGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-- 342

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
               S  N +I+ Y +   + +A+ +FD M  RD ++W +M+AGY  +    EA   F  
Sbjct: 343 ---VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G  L RS+F S +  CA    L L +QLH +++K G +    +   L++ Y KCG 
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E+A+ +F  M   KD+VSW  MI+G+ ++G  ++A+ FF  M REG++P+  T   +L+
Sbjct: 460 IEEANDLFKEM-AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518

Query: 391 A---QPAVSPFQVHAHIIKTNY-----EKSFSVGTALLNAYVKKGILDEAAKVFELID-E 441
           A      V   + + + +  +Y      + ++    LL    + G+L++A  + + +  E
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG---RAGLLEDAHNLMKNMPFE 575

Query: 442 KDIVAWSAMLAGYAQIGDTE 461
            D   W  +L      G+TE
Sbjct: 576 PDAAIWGTLLGASRVHGNTE 595


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 287/820 (35%), Positives = 447/820 (54%), Gaps = 32/820 (3%)

Query: 42   NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL-FDHVFGRQV 100
            + V +N ++        H +A+ +F  +R  G+     TL ++L        D    R+ 
Sbjct: 298  DLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKF 357

Query: 101  HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSWTSLLSGYARNKM 159
            H    +SG+ RDV V  +++ +Y +         VF  +  + +V+SW ++L      K 
Sbjct: 358  HGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKS 417

Query: 160  NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV-TSVCN 218
              +V+  FH M + GI PN  +F  +L   ++   +    ++H++++    + V +SV  
Sbjct: 418  FGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477

Query: 219  ALISMYLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             L+SMY K   + +A  VF  M    R  +TWN M+  Y  N+   EAF     M   G 
Sbjct: 478  MLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537

Query: 277  ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                 +F SV+  C  ++E ++ R     +L++G      + T L+  + +C ++E A  
Sbjct: 538  LPDALSFTSVLSSCYCSQEAQVLRMC---ILESGYR-SACLETALISMHGRCRELEQARS 593

Query: 337  IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
            +F  M +  DVVSWTAM+S   +N       + F +M  EGV P+ FT +  L      +
Sbjct: 594  VFDEM-DHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDST 652

Query: 397  PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                   +HA + +   E   +V  ALLN Y   G   EA   FE +  +D+V+W+ M A
Sbjct: 653  TLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSA 712

Query: 453  GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
             YAQ G  + AV ++R +  EGVKP++ TFS+ +N  +  SA V  GK FH  + ++ L+
Sbjct: 713  AYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNV-SGGSALVSDGKLFHGLAAESGLD 771

Query: 513  NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            + + V++ LV +Y+K G ++ A  +F+   +  +V  N++I   AQHG +++A+++F +M
Sbjct: 772  SDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKM 831

Query: 573  RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
            +++ +  D  T + +I+AC HAG+V+EG   F  M     I PT+EHY+C VDL  RAG 
Sbjct: 832  QQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQ 891

Query: 633  LEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNM 678
            LE A  II +MPF  +  VW ++L  C              R++ L PH+SA +V+LSN+
Sbjct: 892  LEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNI 951

Query: 679  YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
            Y ATG W++    RK + D+ VK   G SW+E+  + + F+AGD SHPQ+++IY  L++L
Sbjct: 952  YCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKL 1011

Query: 739  STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
               ++ AGY+ D      D +DE KE  L  HSER+AIAFGL+ATP    L+IVKNLRVC
Sbjct: 1012 ELLMRRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVC 1068

Query: 799  GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            GDCHT  K IS +  R+I+VRD+ RFHHF  G CSC D W
Sbjct: 1069 GDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 168/579 (29%), Positives = 284/579 (49%), Gaps = 26/579 (4%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +++L++C    D   G++ H     +G  + + +   L+++Y+R  ++E+   +F  M E
Sbjct: 29  TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQ 200
            NVVSWT+L+S  A++    R   LF  M +E    PNS+T   +L   A+   +A    
Sbjct: 89  RNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 201 VHTMVIKNGGE----VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
           +H M+ + G E      T V NA+I+MY K     DA AVF  + ++D ++W +M   Y 
Sbjct: 149 IHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYA 208

Query: 257 TN-ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                + +A   F  M L        TF++ +  C +   LR    LHS + + G+ FD 
Sbjct: 209 QERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEAGLGFDP 265

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMM--REMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
                L+  Y KCG  E A  +F  M  R+  D+VSW AMIS  ++ G    A+  F ++
Sbjct: 266 LAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRL 325

Query: 374 TREGVRPNGFTYSIILTAQPAV-----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
             EG+RPN  T   IL A  A      +  + H  I ++ Y +   VG A+++ Y K G 
Sbjct: 326 RLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGF 385

Query: 429 LDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
              A  VF  I  K D+++W+ ML            V  +  +   G+ PN+ +F +++N
Sbjct: 386 FSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILN 445

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNA-LCVSSALVTMYSKKGNIESASEVFKRQ--RKR 544
           AC+  S A++ G++ H+  +  + +     V++ LV+MY K G+I  A  VFK      R
Sbjct: 446 ACS-NSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSR 504

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
            LV+WN M+  YAQ+  +K+A     EM +  +  D ++F  V+++C  +    E Q   
Sbjct: 505 SLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLR 561

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
             ++   +    +E  + ++ ++ R   LE+A  + + M
Sbjct: 562 MCILESGYRSACLE--TALISMHGRCRELEQARSVFDEM 598



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 162/651 (24%), Positives = 297/651 (45%), Gaps = 35/651 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS----TLSSV 84
           ++  ++F +  +RN V +  L+    +      A  LF   R + L    +    TL ++
Sbjct: 77  EEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALF---RTMLLESSAAPNSYTLVAM 133

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVST----SLVDLYMRTNNVEDGRRVFDDMN 140
           L  C    D   GR +H    + G  R+   +T    +++++Y +  + ED   VF  + 
Sbjct: 134 LNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIP 193

Query: 141 ESNVVSWTSLLSGYARN-KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           E +VVSWT++   YA+  +     L +F  M ++ + PN  TF T LG       +    
Sbjct: 194 EKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGT 250

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR---DSITWNSMVAGYV 256
            +H+++ + G        NALI+MY K      A  VF  M  R   D ++WN+M++  V
Sbjct: 251 WLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASV 310

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIK-LCATTKELRLARQLHSQVLKNGIDFDH 315
               H +A   F  + L G      T ++++  L A+  +   AR+ H ++ ++G   D 
Sbjct: 311 EAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDV 370

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            +   ++  Y+KCG    A  +F  +R   DV+SW  M+       +    VN F  M  
Sbjct: 371 VVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLL 430

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHII--KTNYEKSFSVGTALLNAYVKKGIL 429
            G+ PN  ++  IL A           ++H+ I+  + +Y +S SV T L++ Y K G +
Sbjct: 431 AGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES-SVATMLVSMYGKCGSI 489

Query: 430 DEAAKVFE--LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            EA  VF+   +  + +V W+ ML  YAQ   ++ A     ++   GV P+  +F+SV++
Sbjct: 490 AEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS 549

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           +C       ++ +    C +++   +A C+ +AL++M+ +   +E A  VF      D+V
Sbjct: 550 SCYCS----QEAQVLRMCILESGYRSA-CLETALISMHGRCRELEQARSVFDEMDHGDVV 604

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SW +M+   A++   K+   +F+ M+ + +  D  T    +  C  +  +  G +     
Sbjct: 605 SWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLG-KIIHAC 663

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           V E  +   +   + ++++YS  G   +A+     M  A     W  + AA
Sbjct: 664 VTEIGLEADIAVENALLNMYSNCGDWREALSFFETMK-ARDLVSWNIMSAA 713



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 247/492 (50%), Gaps = 19/492 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           ++ +L    D   +A   + H ++   G E    + N LI+MY++   + +A A+F  ME
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLAR 300
           +R+ ++W ++++    +     AF  F  M L  +    S T V+++  CA +++L + R
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 301 QLHSQVLKNGIDFDHNIRT----GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            +H+ + + G++ +    T     ++  Y+KCG  EDA  +F  + E KDVVSWTAM   
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPE-KDVVSWTAMAGA 206

Query: 357 HLQNGAI-DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEK 411
           + Q       A+  F +M  + + PN  T+   +TA  A +  +    +H+ + +     
Sbjct: 207 YAQERRFYPDALRIFREMLLQPLAPNVITF---ITALGACTSLRDGTWLHSLLHEAGLGF 263

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELI---DEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
               G AL+N Y K G  + A  VF+ +    E D+V+W+AM++   + G    A+ I+R
Sbjct: 264 DPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           +L  EG++PN  T  +++NA  A        ++FH    ++     + V +A+++MY+K 
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKC 383

Query: 529 GNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
           G   +A  VF+R R K D++SWN+M+          K +  F  M    ++ + ++FI +
Sbjct: 384 GFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAI 443

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+++  +D G++   +++     Y      + +V +Y + G + +A  +   MP  +
Sbjct: 444 LNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPS 503

Query: 648 SATV-WRTVLAA 658
            + V W  +L A
Sbjct: 504 RSLVTWNVMLGA 515



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 215/441 (48%), Gaps = 35/441 (7%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P R+ V +N +L  Y ++   +EA    + + + G+     + +SVL +C C  +     
Sbjct: 502 PSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE----A 557

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           QV   C+     R   + T+L+ ++ R   +E  R VFD+M+  +VVSWT+++S  A N+
Sbjct: 558 QVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENR 617

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               V  LF RMQ+EG+ P+ FT +T L    D   +     +H  V + G E   +V N
Sbjct: 618 DFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVEN 677

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL++MY      R+A + F+ M+ RD ++WN M A Y    L  EA   F +M L G + 
Sbjct: 678 ALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKP 737

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            + TF + + +   +  +   +  H    ++G+D D ++ TGL+  Y+KCGK+++A  +F
Sbjct: 738 DKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLF 797

Query: 339 SMMREMKDVVSWT-----AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
                 +    WT     A+I    Q+G  + AV  F +M +EGVRP+  T   I++A  
Sbjct: 798 ------RGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACG 851

Query: 394 AVSPFQVHAHIIKTN------YEKSFSVGTAL------LNAYVKKGILDEAAKVFELID- 440
                  HA +++         ++ F +   L      ++   + G L+ A ++   +  
Sbjct: 852 -------HAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPF 904

Query: 441 EKDIVAWSAMLAGYAQIGDTE 461
           E + + W+++L      GD E
Sbjct: 905 EDNTLVWTSLLGTCKLQGDAE 925



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 120/263 (45%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ +S+FD     + V +  ++     +   +E  +LF  ++  G+     TL++ L TC
Sbjct: 589 EQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC 648

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+ +H    + G   D+ V  +L+++Y    +  +    F+ M   ++VSW 
Sbjct: 649 LDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWN 708

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            + + YA+  +    + LF  MQ+EG+KP+  TFST L V     +V+     H +  ++
Sbjct: 709 IMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAES 768

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +   SV   L+ +Y K   + +A ++F G      +  N+++     +    EA + F
Sbjct: 769 GLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMF 828

Query: 269 NNMGLAGAELTRSTFVSVIKLCA 291
             M   G     +T VS+I  C 
Sbjct: 829 WKMQQEGVRPDVATLVSIISACG 851


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 263/704 (37%), Positives = 407/704 (57%), Gaps = 84/704 (11%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+L+SM+ KS  + DAR VF  M +RD+++W  MV G        EA +T  +M   G  
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T+ T  +V+  CA T+   + R++HS V+K G+     +   ++  Y KCG  E A+ +
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221

Query: 338 F----------------------------SMMREMKD--VVSWTAMISGHLQNGAIDLAV 367
           F                            S+   M D  +VSW AMI+G+ QNG    A+
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 368 NFFCQMTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKT--------------N 408
             F +M  E  + P+ FT + +L+A   +       QVHA+I++T               
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 409 YEKSFSVG-------------------TALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           Y KS SV                    TALL  YVK G ++ A ++F +++ +D+VAW+A
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GY Q G  + A+ ++R + + G +PN +T ++V++ C A  A ++ GKQ H  +I++
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC-ASLACLDYGKQIHCRAIRS 460

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEV 568
            L  +  VS+A++TMY++ G+   A  +F +   +++ ++W SMI   AQHG  ++A+ +
Sbjct: 461 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM R  +E D IT++GV++AC+HAG V+EG++Y+D + NEH I P M HY+CMVDL +
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG+  +A + I RMP    A  W ++L+ACR              L+S+ P++S  Y  
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           ++N+Y+A G W + AR+ K   ++ V+KE G+SW  +++K + F A D+ HPQ + +Y+ 
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
              +   +K AG+ PD   VL D+DDE KE +LS+HSE+LAIAFGL++TP    L+++KN
Sbjct: 701 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 760

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCH  IK ISK+  R+I+VRD  RFHHF++GLCSC DYW
Sbjct: 761 LRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 252/533 (47%), Gaps = 86/533 (16%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V    SL+ ++ ++  + D R VF +M E + VSWT ++ G  R       ++    M
Sbjct: 96  RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK---- 226
             +G  P  FT + VL   A     A   +VH+ V+K G      V N++++MY K    
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDS 215

Query: 227 -------SKM-VRD-------------------ARAVFDGMEDRDSITWNSMVAGYVTNE 259
                   +M VR                    A ++F+ M DR  ++WN+M+AGY  N 
Sbjct: 216 ETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275

Query: 260 LHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           L  +A + F+ M     +A  E    T  SV+  CA    +R+ +Q+H+ +L+  + ++ 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEF---TITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332

Query: 316 NIRTGLMVAYSKCGKMEDASKI-------------FSMM-------------REM----- 344
            +   L+  Y+K G +E+A +I             F+ +             REM     
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 392

Query: 345 -KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
            +DVV+WTAMI G+ QNG  D A++ F  M   G  PN +T + +L+   +++      Q
Sbjct: 393 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 452

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIG 458
           +H   I++  E+S SV  A++  Y + G    A ++F+ +   K+ + W++M+   AQ G
Sbjct: 453 IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHG 512

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH-----ACSIKAKLNN 513
             E AV ++ ++   GV+P+  T+  V++AC+  +  V +GK+++        I  ++++
Sbjct: 513 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACS-HAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
             C    +V + ++ G    A E  +R   + D ++W S++     H + + A
Sbjct: 572 YAC----MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA 620



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 237/532 (44%), Gaps = 74/532 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P+R+ V +  ++    R     EA+   L +   G      TL++VL +C   
Sbjct: 118 RGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 177

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-------------- 137
                GR+VH   VK G    V V+ S++++Y +  + E    VF+              
Sbjct: 178 QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMV 237

Query: 138 ---------DMNES--------NVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNS 179
                    D+ ES        ++VSW ++++GY +N ++ + L+LF RM  E  + P+ 
Sbjct: 238 SLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDE 297

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           FT ++VL   A+ G V    QVH  +++      + V NALIS Y KS  V +AR + D 
Sbjct: 298 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 357

Query: 240 ---------------------------------MEDRDSITWNSMVAGYVTNELHMEAFE 266
                                            M +RD + W +M+ GY  N  + EA +
Sbjct: 358 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 417

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F +M   G E    T  +V+ +CA+   L   +Q+H + +++ ++   ++   ++  Y+
Sbjct: 418 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 477

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           + G    A ++F  +   K+ ++WT+MI    Q+G  + AV  F +M R GV P+  TY 
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 537

Query: 387 IILTA---QPAVSPFQVHAHIIKTNYE--KSFSVGTALLNAYVKKGILDEAAKVFELID- 440
            +L+A      V+  + +   IK  ++     S    +++   + G+  EA +    +  
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPV 597

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF-TFSSVINACTA 491
           E D +AW ++L+      + E A     +L S  + PN    +S++ N  +A
Sbjct: 598 EPDAIAWGSLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIANVYSA 647



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 196/443 (44%), Gaps = 57/443 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTC 88
           +SLF+  P R+ V +N ++  Y ++ L  +AL LF   L    +    F  T++SVL  C
Sbjct: 250 ESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEF--TITSVLSAC 307

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD---------- 138
             L +   G+QVH   +++  A +  V+ +L+  Y ++ +VE+ RR+ D           
Sbjct: 308 ANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVIS 367

Query: 139 -----------------------MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
                                  MN  +VV+WT+++ GY +N  ND  ++LF  M   G 
Sbjct: 368 FTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGP 427

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           +PNS+T + VL V A    +    Q+H   I++  E  +SV NA+I+MY +S     AR 
Sbjct: 428 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARR 487

Query: 236 VFDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
           +FD +  R ++ITW SM+     +    EA   F  M  AG E  R T+V V+  C+   
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGL-----MV-AYSKCGKMEDASKIFSMMREMKDVV 348
            +   ++ + Q+ KN    +H I   +     MV   ++ G   +A +    M    D +
Sbjct: 548 FVNEGKRYYDQI-KN----EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602

Query: 349 SWTAMISG---HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
           +W +++S    H      +LA      +       N   YS I     A   +   A I 
Sbjct: 603 AWGSLLSACRVHKNAELAELAAEKLLSIDPN----NSGAYSAIANVYSACGRWSDAARIW 658

Query: 406 KTNYEKSFSVGTALLNAYVKKGI 428
           K   EK+    T     +++  I
Sbjct: 659 KARKEKAVRKETGFSWTHIRSKI 681



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 195/437 (44%), Gaps = 84/437 (19%)

Query: 296 LRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           LR AR+L  ++ L     F  N    L+  ++K G++ DA  +F+ M E +D VSWT M+
Sbjct: 81  LRDARRLFDEIPLARRNVFTWN---SLLSMFAKSGRLADARGVFAEMPE-RDAVSWTVMV 136

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYE 410
            G  + G    A+     MT +G  P  FT + +L++    Q      +VH+ ++K    
Sbjct: 137 VGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLG 196

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW----------------------- 447
               V  ++LN Y K G  + A  VFE +  + + +W                       
Sbjct: 197 SCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESM 256

Query: 448 --------SAMLAGYAQIGDTEGAVKIY-RQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
                   +AM+AGY Q G    A+K++ R L    + P+EFT +SV++AC A    V  
Sbjct: 257 PDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSAC-ANLGNVRI 315

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNI--------------------------- 531
           GKQ HA  ++ ++     V++AL++ Y+K G++                           
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375

Query: 532 ------ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
                 ESA E+F     RD+V+W +MI GY Q+G   +A+++F+ M     E +  T  
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 435

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS----CMVDLYSRAGMLEKAMDIIN 641
            V++ C     +D G+Q     ++   I   +E  S     ++ +Y+R+G    A  + +
Sbjct: 436 AVLSVCASLACLDYGKQ-----IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFD 490

Query: 642 RMPFAASATVWRTVLAA 658
           ++ +      W +++ A
Sbjct: 491 QVCWRKETITWTSMIVA 507


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/707 (35%), Positives = 409/707 (57%), Gaps = 20/707 (2%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ G+A+          F  +   G +P+++T   V+    D   +     +H +V K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            ++   VC AL+ MY+K + + DAR +FD M++RD +TW  M+ GY       E+   F 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G    +   V+V+  CA    +  AR +   + +     D  + T ++  Y+KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A +IF  M E K+V+SW+AMI+ +  +G    A++ F  M   G+ P+  T + +L
Sbjct: 181 CVESAREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239

Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   +   Q    +H  + K   +    V  AL++ Y K   +++A  +F+ + E+D+V
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+ M+ GYA+ G+   ++ ++ ++  EGV P++    +V+ AC A   A+ + +     
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFAC-AKLGAMHKARTIDDY 358

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
             + K    + + +A++ M++K G +ESA E+F R  +++++SW++MI  Y  HG  +KA
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L++F  M R  +  + IT + ++ AC+HAGLV+EG ++F +M  ++ +   ++HY+C+VD
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           L  RAG L++A+ +I  M       +W   L ACR              L+ LQP +   
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGH 538

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           Y+LLSN+YA  G W++ A+ R LM+ R++KK  G++WIEV NK++ F  GD +HP+S +I
Sbjct: 539 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 598

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           Y  L+ L  +L+  GY PDT++VL D+D+E K  IL  HSE+LAIAFGL+ATP   P++I
Sbjct: 599 YEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRI 658

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLRVCGDCHT  KL+S +  R I+VRD NRFHHFKEG CSCGDYW
Sbjct: 659 IKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 256/490 (52%), Gaps = 16/490 (3%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL  V++ C  L +   GR +H    K G   D  V  +LVD+Y++   +ED R +FD M
Sbjct: 32  TLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKM 91

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E ++V+WT ++ GYA     +  L LF +M+ EG+ P+     TV+   A  G +  A 
Sbjct: 92  QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 151

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +   + +   ++   +  A+I MY K   V  AR +FD ME+++ I+W++M+A Y  + 
Sbjct: 152 IIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHG 211

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A + F  M  +G    + T  S++  C+  K L++ R +H  V K G+D DH +  
Sbjct: 212 QGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCA 271

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC ++EDA  +F  M E +D+V+WT MI G+ + G  + ++  F +M  EGV 
Sbjct: 272 ALVDMYGKCREIEDARFLFDKMPE-RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 330

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+      ++ A   +        +  +I +  ++    +GTA+++ + K G ++ A ++
Sbjct: 331 PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 390

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ ++EK++++WSAM+A Y   G    A+ ++  +   G+ PN+ T  S++ AC+  +  
Sbjct: 391 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS-HAGL 449

Query: 496 VEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSW 549
           VE+G +F +      S++A + +  CV    V +  + G ++ A ++ +    ++D   W
Sbjct: 450 VEEGLRFFSLMWEDYSVRADVKHYTCV----VDLLGRAGRLDEALKLIESMTVEKDEGLW 505

Query: 550 NSMICGYAQH 559
            + +     H
Sbjct: 506 GAFLGACRTH 515



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 166/337 (49%), Gaps = 23/337 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR  ++N + ++ ++  Y      ++AL+LF  +   G+     TL+S+L  C  L
Sbjct: 186 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDL 245

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   GR +H    K G   D  V  +LVD+Y +   +ED R +FD M E ++V+WT ++
Sbjct: 246 KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMI 305

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GYA     +  L LF +M+ EG+ P+     TV+   A  G +  A  +   + +   +
Sbjct: 306 GGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQ 365

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   +  A+I M+ K   V  AR +FD ME+++ I+W++M+A Y  +    +A + F  M
Sbjct: 366 LDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 425

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNIR------T 319
             +G    + T VS++  C+           H+ +++ G+ F      D+++R      T
Sbjct: 426 LRSGILPNKITLVSLLYACS-----------HAGLVEEGLRFFSLMWEDYSVRADVKHYT 474

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            ++    + G++++A K+   M   KD   W A +  
Sbjct: 475 CVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 511


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 263/704 (37%), Positives = 407/704 (57%), Gaps = 84/704 (11%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+L+SM+ KS  + DAR VF  M +RD+++W  MV G        EA +T  +M   G  
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T+ T  +V+  CA T+   + R++HS V+K G+     +   ++  Y KCG  E AS +
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221

Query: 338 F----------------------------SMMREM--KDVVSWTAMISGHLQNGAIDLAV 367
           F                            S+   M  + +VSW AMI+G+ QNG    A+
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 368 NFFCQMTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKT--------------N 408
             F +M  E  + P+ FT + +L+A   +       QVHA+I++T               
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 409 YEKSFSVG-------------------TALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           Y KS SV                    TALL  YVK G ++ A ++F +++ +D+VAW+A
Sbjct: 342 YAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTA 401

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GY Q G  + A+ ++R + + G +PN +T ++V++ C A  A ++ GKQ H  +I++
Sbjct: 402 MIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC-ASLACLDYGKQIHCRAIRS 460

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEV 568
            L  +  VS+A++TMY++ G+   A  +F +   +++ ++W SMI   AQHG  ++A+ +
Sbjct: 461 LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM R  +E D IT++GV++AC+HAG V+EG++Y+D + NEH I P M HY+CMVDL +
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG+  +A + I RMP    A  W ++L+ACR              L+S+ P++S  Y  
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           ++N+Y+A G W + AR+ K   ++ V+KE G+SW  +++K + F A D+ HPQ + +Y+ 
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
              +   +K AG+ PD   VL D+DDE KE +LS+HSE+LAIAFGL++TP    L+++KN
Sbjct: 701 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 760

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCH  IK ISK+  R+I+VRD  RFHHF++GLCSC DYW
Sbjct: 761 LRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 251/533 (47%), Gaps = 86/533 (16%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V    SL+ ++ ++  + D R VF +M E + VSWT ++ G  R       ++    M
Sbjct: 96  RNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK---- 226
             +G  P  FT + VL   A     A   +VH+ V+K G      V N++++MY K    
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDA 215

Query: 227 -------SKM-VRD-------------------ARAVFDGMEDRDSITWNSMVAGYVTNE 259
                   +M VR                    A ++F+ M  R  ++WN+M+AGY  N 
Sbjct: 216 ETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275

Query: 260 LHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           L  +A + F+ M     +A  E    T  SV+  CA    +R+ +Q+H+ +L+  + ++ 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEF---TITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332

Query: 316 NIRTGLMVAYSKCGKMEDASKI-------------FSMM-------------REM----- 344
            +   L+  Y+K G +E+A +I             F+ +             REM     
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 392

Query: 345 -KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
            +DVV+WTAMI G+ QNG  D A++ F  M   G  PN +T + +L+   +++      Q
Sbjct: 393 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 452

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIG 458
           +H   I++  E+S SV  A++  Y + G    A ++F+ +   K+ + W++M+   AQ G
Sbjct: 453 IHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHG 512

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH-----ACSIKAKLNN 513
             E AV ++ ++   GV+P+  T+  V++AC+  +  V +GK+++        I  ++++
Sbjct: 513 QGEEAVGLFEEMLRAGVEPDRITYVGVLSACS-HAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
             C    +V + ++ G    A E  +R   + D ++W S++     H + + A
Sbjct: 572 YAC----MVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA 620



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 237/532 (44%), Gaps = 74/532 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P+R+ V +  ++    R     EA+   L +   G      TL++VL +C   
Sbjct: 118 RGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 177

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-------------- 137
                GR+VH   VK G    V V+ S++++Y +  + E    VF+              
Sbjct: 178 QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMV 237

Query: 138 ---------DMNES--------NVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNS 179
                    D+ ES        ++VSW ++++GY +N ++ + L+LF RM  E  + P+ 
Sbjct: 238 SLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDE 297

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           FT ++VL   A+ G V    QVH  +++      + V NALIS Y KS  V +AR + D 
Sbjct: 298 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 357

Query: 240 ---------------------------------MEDRDSITWNSMVAGYVTNELHMEAFE 266
                                            M +RD + W +M+ GY  N  + EA +
Sbjct: 358 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 417

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F +M   G E    T  +V+ +CA+   L   +Q+H + +++ ++   ++   ++  Y+
Sbjct: 418 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYA 477

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           + G    A ++F  +   K+ ++WT+MI    Q+G  + AV  F +M R GV P+  TY 
Sbjct: 478 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 537

Query: 387 IILTA---QPAVSPFQVHAHIIKTNYE--KSFSVGTALLNAYVKKGILDEAAKVFELID- 440
            +L+A      V+  + +   IK  ++     S    +++   + G+  EA +    +  
Sbjct: 538 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPV 597

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF-TFSSVINACTA 491
           E D +AW ++L+      + E A     +L S  + PN    +S++ N  +A
Sbjct: 598 EPDAIAWGSLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIANVYSA 647



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 196/443 (44%), Gaps = 57/443 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTC 88
           +SLF+  P R+ V +N ++  Y ++ L  +AL LF   L    +    F  T++SVL  C
Sbjct: 250 ESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEF--TITSVLSAC 307

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD---------- 138
             L +   G+QVH   +++  A +  V+ +L+  Y ++ +VE+ RR+ D           
Sbjct: 308 ANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVIS 367

Query: 139 -----------------------MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
                                  MN  +VV+WT+++ GY +N  ND  ++LF  M   G 
Sbjct: 368 FTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGP 427

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           +PNS+T + VL V A    +    Q+H   I++  E  +SV NA+I+MY +S     AR 
Sbjct: 428 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARR 487

Query: 236 VFDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
           +FD +  R ++ITW SM+     +    EA   F  M  AG E  R T+V V+  C+   
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGL-----MV-AYSKCGKMEDASKIFSMMREMKDVV 348
            +   ++ + Q+ KN    +H I   +     MV   ++ G   +A +    M    D +
Sbjct: 548 FVNEGKRYYDQI-KN----EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 602

Query: 349 SWTAMISG---HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
           +W +++S    H      +LA      +       N   YS I     A   +   A I 
Sbjct: 603 AWGSLLSACRVHKNAELAELAAEKLLSIDPN----NSGAYSAIANVYSACGRWSDAARIW 658

Query: 406 KTNYEKSFSVGTALLNAYVKKGI 428
           K   EK+    T     +++  I
Sbjct: 659 KARKEKAVRKETGFSWTHIRSKI 681



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 196/437 (44%), Gaps = 84/437 (19%)

Query: 296 LRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           LR AR+L  ++ L     F  N    L+  ++K G++ DA  +F+ M E +D VSWT M+
Sbjct: 81  LRDARRLFDEIPLARRNVFTWN---SLLSMFAKSGRLADARGVFAEMPE-RDAVSWTVMV 136

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYE 410
            G  + G    A+     MT +G  P  FT + +L++    Q      +VH+ ++K    
Sbjct: 137 VGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLG 196

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW----------------------- 447
               V  ++LN Y K G  + A+ VFE +  + + +W                       
Sbjct: 197 SCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESM 256

Query: 448 --------SAMLAGYAQIGDTEGAVKIY-RQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
                   +AM+AGY Q G    A+K++ R L    + P+EFT +SV++AC A    V  
Sbjct: 257 PGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSAC-ANLGNVRI 315

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNI--------------------------- 531
           GKQ HA  ++ ++     V++AL++ Y+K G++                           
Sbjct: 316 GKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGY 375

Query: 532 ------ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
                 ESA E+F     RD+V+W +MI GY Q+G   +A+++F+ M     E +  T  
Sbjct: 376 VKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLA 435

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS----CMVDLYSRAGMLEKAMDIIN 641
            V++ C     +D G+Q     ++   I   +E  S     ++ +Y+R+G    A  + +
Sbjct: 436 AVLSVCASLACLDYGKQ-----IHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFD 490

Query: 642 RMPFAASATVWRTVLAA 658
           ++ +      W +++ A
Sbjct: 491 QVCWRKETITWTSMIVA 507


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 279/772 (36%), Positives = 428/772 (55%), Gaps = 21/772 (2%)

Query: 83   SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
            SVL+ C        G++VH   + +G + D  +   LV +Y+   ++  GR++FD +   
Sbjct: 374  SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433

Query: 143  NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
             V  W  L+S YA+       + LF +MQ  G+  N +TF+ VL   A  G V    +VH
Sbjct: 434  KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493

Query: 203  TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
              V+K G    T+V N+LI+ Y K   V  A  +FD + + D ++WNSM+ G V N    
Sbjct: 494  GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 553

Query: 263  EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
               E F  M + G E+  +T VSV+   A    L L R LH   +K     +      L+
Sbjct: 554  NGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 613

Query: 323  VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
              YSKCG +  A+++F  M +   +VSWT+ I+ +++ G    A+  F +M  +GVRP+ 
Sbjct: 614  DMYSKCGNLNGATEVFVKMGDTT-IVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDI 672

Query: 383  FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            +T + I+ A    S       VH+++IK     +  V  AL+N Y K G ++EA  VF  
Sbjct: 673  YTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSK 732

Query: 439  IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
            I  KDIV+W+ M+ GY+Q      A++++  +  +  KP++ T + V+ AC A  AA+++
Sbjct: 733  IPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPAC-AGLAALDK 790

Query: 499  GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
            G++ H   ++    + L V+ ALV MY+K G +  A  +F    K+DL+SW  MI GY  
Sbjct: 791  GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGM 850

Query: 559  HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
            HG   +A+  F EMR   +E D  +F  ++ AC+H+GL++EG ++F+ M NE  + P +E
Sbjct: 851  HGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLE 910

Query: 619  HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISL 664
            HY+C+VDL +R G L KA   I  MP     T+W  +L+ CR+                L
Sbjct: 911  HYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFEL 970

Query: 665  QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            +P ++  YV+L+N+YA    W+E  ++RK M  R  K+  G SWIEV  K   F+AG+  
Sbjct: 971  EPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSK 1030

Query: 725  HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
            HPQ+ +I   L +L+ ++++  Y     YVL + DD  KE I   HSE+ A+AFG++  P
Sbjct: 1031 HPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLP 1090

Query: 785  AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
             G  +++ KN RVCGDCH + K +SK  +R+IV+RD+NRFHHFK+GLCSC D
Sbjct: 1091 PGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 281/550 (51%), Gaps = 19/550 (3%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + +FD+        +N L+ EY +    +E+++LF  +++LG+     T + VLK   
Sbjct: 422 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFA 481

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L      ++VH   +K GF  +  V  SL+  Y +   VE    +FD+++E +VVSW S
Sbjct: 482 ALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 541

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN- 208
           +++G   N  +   LE+F +M + G++ +  T  +VL   A+ G ++    +H   +K  
Sbjct: 542 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601

Query: 209 -GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              EVV S  N L+ MY K   +  A  VF  M D   ++W S +A YV   L+ +A   
Sbjct: 602 FSEEVVFS--NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGL 659

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M   G      T  S++  CA +  L   R +HS V+KNG+  +  +   L+  Y+K
Sbjct: 660 FDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAK 719

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +E+A  +FS +  +KD+VSW  MI G+ QN   + A+  F  M ++  +P+  T + 
Sbjct: 720 CGSVEEARLVFSKI-PVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMAC 777

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L A   ++      ++H HI++  Y     V  AL++ Y K G+L  A  +F++I +KD
Sbjct: 778 VLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKD 837

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +++W+ M+AGY   G    A+  + ++   G++P+E +FS ++NAC+      E  K F+
Sbjct: 838 LISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFN 897

Query: 504 A----CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
           +    C ++ KL +  CV    V + ++ GN+  A +  +    K D   W  ++ G   
Sbjct: 898 SMRNECGVEPKLEHYACV----VDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRI 953

Query: 559 HGHTKKALEV 568
           H   K A +V
Sbjct: 954 HHDVKLAEKV 963


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 247/612 (40%), Positives = 379/612 (61%), Gaps = 23/612 (3%)

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR--STFVSVIKLCATTKELRLARQLHS 304
           ++ S    +  N+ H++A  + +N       LT   S + S+++ C   K ++  +QLH+
Sbjct: 40  SFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHA 99

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           QV   G  FD  I T L+  Y  C  +  A  +F  + +  ++  W  +I G+  NG  +
Sbjct: 100 QVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK-HNIFLWNVLIRGYAWNGPYE 158

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALL 420
            AV  + QM   G+ P+ FT+  +L A  A+S  +    +H H+++T +EK   VG AL+
Sbjct: 159 AAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALI 218

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + Y K G +  A +VF+ I  +D V W++MLA Y+Q G  +  + +  ++   G++P E 
Sbjct: 219 DMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEA 278

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T  + I+A +A +AA+ QG++ H  S + +  +   V +ALV MY+K G++  A  +F+R
Sbjct: 279 TLVTAISA-SADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFER 337

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              + +VSWN+MI GYA HGH  +AL++F+EM R   + D ITF+GV++AC+H GL++EG
Sbjct: 338 LGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEG 396

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC- 659
             +F+ M+ ++ I PT++HY+CMVDL   +G L++A ++I +M     + VW  +L +C 
Sbjct: 397 WMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCK 456

Query: 660 -------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                        RLI L+P D+  YV+LSN+YA  G W+  A++RKLM DR++KK    
Sbjct: 457 IHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIAC 516

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SWIEVKNK ++FL+GD SHP S++IYS+LE +   +K+AGY P T  V  D++D+ K  +
Sbjct: 517 SWIEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANM 576

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           +  HSERLAIAFGL++TP G  L I KNLR+C DCH  IK ISK+  R+I VRD NR+HH
Sbjct: 577 VCSHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHH 636

Query: 827 FKEGLCSCGDYW 838
           FK+G+CSCGDYW
Sbjct: 637 FKDGVCSCGDYW 648



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 2/313 (0%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           S  +S+L++C        G+Q+H +   +GF  D  ++T LV+LY   +++   R +FD 
Sbjct: 76  SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           + + N+  W  L+ GYA N   +  ++L+++M   G+ P++FTF  VL   A    +   
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            ++H  V++ G E    V  ALI MY K   V  AR VFD +  RD++ WNSM+A Y  N
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQN 255

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
                     + M L G   T +T V+ I   A    L   R+LH    +   +    ++
Sbjct: 256 GHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVK 315

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y+KCG +  A  +F  +  +K VVSW AMI+G+  +G    A++ F +M R   
Sbjct: 316 TALVDMYAKCGSVRVARNLFERL-GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA- 373

Query: 379 RPNGFTYSIILTA 391
           +P+  T+  +L+A
Sbjct: 374 KPDHITFVGVLSA 386



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 153/323 (47%), Gaps = 2/323 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFDR P+ N   +N L+  Y  +  ++ A+ L+  +   GL     T   VLK C  L  
Sbjct: 132 LFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSA 191

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR++H   V++G+ +DV V  +L+D+Y +   V   R VFD +   + V W S+L+ 
Sbjct: 192 IEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAA 251

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y++N   D  L L   M + G++P   T  T +   AD   +    ++H +  +   E  
Sbjct: 252 YSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESH 311

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL+ MY K   VR AR +F+ +  +  ++WN+M+ GY  +    EA + F  M  
Sbjct: 312 DKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNR 371

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKME 332
             A+    TFV V+  C+    L         ++++  ID      T ++      G+++
Sbjct: 372 V-AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLD 430

Query: 333 DASKIFSMMREMKDVVSWTAMIS 355
           +A  +   M+ + D   W A+++
Sbjct: 431 EAYNLIMQMKVLPDSGVWGALLN 453


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/643 (40%), Positives = 393/643 (61%), Gaps = 24/643 (3%)

Query: 218 NALISMYLKSKM----VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           N L++M L+           R +F  ++  +   WN+M+ G V+N+   +A E +  M  
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G      TF  V+K CA   +L+L  ++H+ V+K G D D  ++T L+  Y+KCG +ED
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K+F  + + K+VVSWTA+ISG++  G    A++ F ++    + P+ FT   +L+A  
Sbjct: 166 AHKVFDDIPD-KNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +        +H  I++    ++  VGT+L++ Y K G +++A  VF+ + EKDIV+W A
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GYA  G  + A+ ++ Q+  E VKP+ +T   V++AC A   A+E G+       + 
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSAC-ARLGALELGEWVSGLVDRN 343

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
           +      + +AL+ +Y+K G++  A EVFK  +++D V WN++I G A +G+ K +  +F
Sbjct: 344 EFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLF 403

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            ++ +  ++ DG TFIG++  CTHAGLVDEG++YF+ M     + P++EHY CMVDL  R
Sbjct: 404 GQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGR 463

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG+L++A  +I  MP  A+A VW  +L ACR              LI L+P +S  YVLL
Sbjct: 464 AGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLL 523

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN+Y+A   W E A+VR  MN+++++K  G SWIEV    + FL GD  HP S +IY+KL
Sbjct: 524 SNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKL 583

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           +EL+ ++K AGY P T +VL DI++E KE  L  HSE+LAIAFGL++    A +++VKNL
Sbjct: 584 DELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNL 643

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           RVCGDCH  IKLIS +  R+I VRD NRFH F+EG CSC DYW
Sbjct: 644 RVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 223/445 (50%), Gaps = 6/445 (1%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           R +F  + + N+  W +++ G   N   D  +E +  M+ EG  PN+FTF  VL   A  
Sbjct: 66  RFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARL 125

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             +   V++HT+V+K G +    V  +L+ +Y K   + DA  VFD + D++ ++W +++
Sbjct: 126 LDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAII 185

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           +GY+      EA + F  +          T V V+  C    +L     +H  +++ G+ 
Sbjct: 186 SGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMV 245

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            +  + T L+  Y+KCG ME A  +F  M E KD+VSW AMI G+  NG    A++ F Q
Sbjct: 246 RNVFVGTSLVDMYAKCGNMEKARSVFDGMPE-KDIVSWGAMIQGYALNGLPKEAIDLFLQ 304

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M RE V+P+ +T   +L+A   +   +    V   + +  +  +  +GTAL++ Y K G 
Sbjct: 305 MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGS 364

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           +  A +VF+ + EKD V W+A+++G A  G  + +  ++ Q+   G+KP+  TF  ++  
Sbjct: 365 MSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCG 424

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLV 547
           CT      E  + F++      L  ++     +V +  + G ++ A ++ +    + + +
Sbjct: 425 CTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAI 484

Query: 548 SWNSMICGYAQHGHTKKALEVFKEM 572
            W +++     H  T+ A    K++
Sbjct: 485 VWGALLGACRIHRDTQLAELALKQL 509



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 215/444 (48%), Gaps = 9/444 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF +  Q N   +N ++     +    +A+  +  +R  G      T   VLK C  L D
Sbjct: 68  LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G ++H   VK GF  DV V TSLV LY +   +ED  +VFDD+ + NVVSWT+++SG
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y         +++F R+    + P+SFT   VL      G + +   +H  +++ G    
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  +L+ MY K   +  AR+VFDGM ++D ++W +M+ GY  N L  EA + F  M  
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQR 307

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    T V V+  CA    L L   +   V +N   ++  + T L+  Y+KCG M  
Sbjct: 308 ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSR 367

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M+E KD V W A+ISG   NG + ++   F Q+ + G++P+G T+  +L    
Sbjct: 368 AWEVFKGMKE-KDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCT 426

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTA------LLNAYVKKGILDEAAKVFELID-EKDIVA 446
                        + Y + FS+  +      +++   + G+LDEA ++   +  E + + 
Sbjct: 427 HAGLVDEGRRYFNSMY-RFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIV 485

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQL 470
           W A+L       DT+ A    +QL
Sbjct: 486 WGALLGACRIHRDTQLAELALKQL 509



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 157/330 (47%), Gaps = 1/330 (0%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y +    +FD  P +N V +  ++  Y      +EA+++F  +  + L     T+  VL 
Sbjct: 162 YLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLS 221

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L D   G  +H   ++ G  R+V V TSLVD+Y +  N+E  R VFD M E ++VS
Sbjct: 222 ACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVS 281

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +++ GYA N +    ++LF +MQ E +KP+ +T   VL   A  G +     V  +V 
Sbjct: 282 WGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVD 341

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           +N       +  ALI +Y K   +  A  VF GM+++D + WN++++G   N     +F 
Sbjct: 342 RNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFG 401

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AY 325
            F  +   G +   +TF+ ++  C     +   R+  + + +           G MV   
Sbjct: 402 LFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLL 461

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
            + G +++A ++   M    + + W A++ 
Sbjct: 462 GRAGLLDEAHQLIRNMPMEANAIVWGALLG 491


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 292/824 (35%), Positives = 448/824 (54%), Gaps = 21/824 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F     +N V +  L+  Y         +N++  +R  G+    +T+SSV+ TC  L +
Sbjct: 87  VFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLEN 146

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G QV    +K G   +V+V+ SL+ ++    +VE+   VF  M+E + +SW S+++ 
Sbjct: 147 ELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAA 206

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y RN +    L  F  M     + NS T ST+L        +     +H++V+K G    
Sbjct: 207 YIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSN 266

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
               N LI+MY  +    DA  VF GM ++D I+WNSM+A Y  +   ++A +    M  
Sbjct: 267 VCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFY 326

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   TF S +  C+  +     + LH+ V+  G+  +  +   L+  Y+K G M +
Sbjct: 327 MRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIE 386

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K+F  M + +D V+W A+I GH  +   D A+  F  M  EGV  N  T S +L A  
Sbjct: 387 AKKVFQTMPK-RDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACL 445

Query: 394 AVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
           A +        +HA II T ++    V  +L+  Y K G L+ +  +F+ +  K+  AW+
Sbjct: 446 APNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWN 505

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM+A  A  G  E A+K   ++   GV  +EF+FS  + A  A  A +E+G+Q H  ++K
Sbjct: 506 AMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAA-AAKLAILEEGQQLHGLAVK 564

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
              ++   V+SA + MY K G I+    +  R   R  +SWN +   +++HG  +KA E 
Sbjct: 565 LGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKET 624

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F EM    ++ D +TF+ +++AC+H G+V+EG  Y+D M+ E  I   + H  C++DL  
Sbjct: 625 FHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLG 684

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           R+G   +A   I  MP + +  VWR++LAAC+              L+ L P D + YVL
Sbjct: 685 RSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVL 744

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
            SN+ A TG W++  ++R+ M   K+KK+   SW+++KNK   F  GD SHPQ+++IY+K
Sbjct: 745 YSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAK 804

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           LEEL   +K+AGY PD SY LQD D+E KE  L  HSERLA+A+GL+++P G+ L+I KN
Sbjct: 805 LEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKN 864

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCH+V K  S +  R IV+RD  RFH F  G CSC DYW
Sbjct: 865 LRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 194/614 (31%), Positives = 315/614 (51%), Gaps = 14/614 (2%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-CLFDHVFGRQVHCECVKSGFAR 111
           + R   ++E++  F  +R  G+   G  ++S++  C    +  + G QVH   VK G   
Sbjct: 4   FVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLS 63

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           DV V TSLV LY       D  +VF +M   NVVSWT+L+  Y        V+ ++ RM+
Sbjct: 64  DVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMR 123

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
            EG+  N  T S+V+             QV   VIK G E   SV N+LISM+     V 
Sbjct: 124 SEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVE 183

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +A  VF GM++ D+I+WNSM+A Y+ N L  E+   F+ M     E+  +T  +++  C 
Sbjct: 184 EACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCG 243

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
           +   L+  R +HS VLK G + +      L+  YS  G+ EDA  +F  M E KD++SW 
Sbjct: 244 SVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVE-KDMISWN 302

Query: 352 AMISGHLQNGAIDLAVNFFCQM--TREGVRPNGFTYSIILTAQP--AVSPFQVHAHIIKT 407
           +M++ + Q+G    A+     M   R G     FT ++   + P  A     +HA +I  
Sbjct: 303 SMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHV 362

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
              ++  VG AL+  Y K G++ EA KVF+ + ++D V W+A++ G+A   + + A+K +
Sbjct: 363 GLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAF 422

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           + +  EGV  N  T S+V+ AC AP+  +E G   HA  I     +   V ++L+TMY+K
Sbjct: 423 KLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAK 482

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G++ S++ +F R   ++  +WN+M+   A HGH ++AL+   EMRR  +  D  +F   
Sbjct: 483 CGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSEC 542

Query: 588 ITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + A     +++EGQQ   + V    + + +      S  +D+Y + G ++  + II R P
Sbjct: 543 LAAAAKLAILEEGQQLHGLAVKLGCDSNPFVA----SATMDMYGKCGEIDDVLRIIPR-P 597

Query: 645 FAASATVWRTVLAA 658
              S   W  + ++
Sbjct: 598 INRSRLSWNILTSS 611



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 245/510 (48%), Gaps = 31/510 (6%)

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA-DEGIVATAVQVHTMVIKNG 209
           +SG+ R       +  F+ M+  G+KP+    ++++      E ++   VQVH  ++K G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V  +L+ +Y    +  DA  VF  M  ++ ++W +++  YV           + 
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G     +T  SVI  C + +   L  Q+   V+K G++ + ++   L+  +   G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E+A  +FS M E  D +SW +MI+ +++NG    ++  F  M R     N  T S +L
Sbjct: 181 SVEEACYVFSGMDE-HDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239

Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
               +V   +    +H+ ++K  +  +      L+  Y   G  ++A  VF+ + EKD++
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W++M+A YAQ G+   A+K+   +       N  TF+S + AC+ P  A E GK  HA 
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATE-GKILHAL 358

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            I   L+  + V +ALVT+Y+K G +  A +VF+   KRD V+WN++I G+A      +A
Sbjct: 359 VIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEA 418

Query: 566 LEVFKEMRRQDLEFDGITFIGVITAC------------THAGLVDEGQQYFDIMVNEHHI 613
           L+ FK MR + +  + IT   V+ AC             HA ++  G Q  + + N    
Sbjct: 419 LKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNS--- 475

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
                    ++ +Y++ G L  + +I +R+
Sbjct: 476 ---------LITMYAKCGDLNSSNNIFDRL 496



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 5/263 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           + +F   P+R+ V +N L+  +       EAL  F  +R  G+P+   T+S+VL  C   
Sbjct: 388 KKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAP 447

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L +H  G  +H   + +GF  D  V  SL+ +Y +  ++     +FD +   N  +W 
Sbjct: 448 NDLLEH--GMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWN 505

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++  A +   +  L+    M+  G+  + F+FS  L   A   I+    Q+H + +K 
Sbjct: 506 AMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKL 565

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +    V +A + MY K   + D   +     +R  ++WN + + +  +    +A ETF
Sbjct: 566 GCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETF 625

Query: 269 NNMGLAGAELTRSTFVSVIKLCA 291
           + M   G +    TFVS++  C+
Sbjct: 626 HEMINLGVKPDHVTFVSLLSACS 648



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 11/286 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            ++FDR   +N   +N ++         +EAL   L +RR G+ +   + S  L     L
Sbjct: 490 NNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKL 549

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   VK G   +  V+++ +D+Y +   ++D  R+       + +SW  L 
Sbjct: 550 AILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILT 609

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG- 210
           S ++R+   ++  E FH M   G+KP+  TF ++L   +  G+V   +  +  +IK  G 
Sbjct: 610 SSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGI 669

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGM--EDRDSITWNSMVAGYVTN---ELHMEAF 265
                 C  +I +  +S    +A      M     D + W S++A   T+   EL  +A 
Sbjct: 670 PAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHV-WRSLLAACKTHGNLELGRKAV 728

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           E    +  +      S +V    +CATT +     ++  Q+  N I
Sbjct: 729 ENLLKLDPS----DDSAYVLYSNICATTGKWEDVEKIRRQMGLNKI 770


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/769 (35%), Positives = 429/769 (55%), Gaps = 32/769 (4%)

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           F H+   Q H + + +G+  D+   T L       +     R +F  + + ++  +  L+
Sbjct: 25  FPHL--AQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLV 82

Query: 152 SGYARNKMNDRVLELF-HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            G++ N      + L+ H  +   + P++FT++  +   +++  +   +  H+++   G 
Sbjct: 83  RGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML-LHAHSIIDGYGS 141

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            V   V +AL+ +Y K   V  AR VFDGM +RD++ WN+M+ G V N    ++ + F  
Sbjct: 142 NVF--VGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFRE 199

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G  +  ST  +V+   A  +EL++   +    LK G  F   + TGL+  YSKCG 
Sbjct: 200 MVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGD 259

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +  A  +F  +    D++++ AMISG   NG  + +V  F ++   G R    + S I+ 
Sbjct: 260 VNTARLLFRRINR-PDLIAYNAMISGFTANGGTECSVKLFRELLFSGER---VSSSTIVG 315

Query: 391 AQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
             P  SPF        +H   +K+    + +V TA    Y K   +D A  +F+   EK 
Sbjct: 316 LIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKT 375

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +VAW+AM++GY Q G TE A+ +++++      PN  T +++++AC A   ++  GK  H
Sbjct: 376 VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSAC-AQLGSLSFGKWVH 434

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
                  L   + VS+ALV MY+K GNI  A ++F    +++ V+WN+MI GY  HG+  
Sbjct: 435 HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGH 494

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +AL+++ EM         +TF+ V+ AC+HAGLV EG++ F  MVN++ I P +EHY+CM
Sbjct: 495 EALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACM 554

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDS 669
           VD+  R+G LEKA++ I +MP      VW T+L AC              RL  L P   
Sbjct: 555 VDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSV 614

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             YVLLSN+Y+   ++ + A +R+++  RK+ K  G + IEV    + F++GD SH  + 
Sbjct: 615 GYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHAT 674

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            IY+KLE+L+ ++++ GY+ +T   L D+++E KE  ++ HSE+LAIAFGL+ T  G  +
Sbjct: 675 DIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEI 734

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +I+KNLRVC DCHT  K ISK+  R IVVRD NRFHHFK+G+CSCGDYW
Sbjct: 735 RIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 177/365 (48%), Gaps = 4/365 (1%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   +FD  P+R+ V +N ++    ++    +++ LF  +   G+ +  ST+++VL 
Sbjct: 161 YARK---VFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLP 217

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L +   G  + C  +K GF     V T L+ LY +  +V   R +F  +N  ++++
Sbjct: 218 AAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIA 277

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           + +++SG+  N   +  ++LF  +   G + +S T   ++ + +  G +  A  +H   +
Sbjct: 278 YNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCV 337

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K+G  +  +V  A  ++Y K   +  AR +FD   ++  + WN+M++GY  N     A  
Sbjct: 338 KSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAIS 397

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M          T  +++  CA    L   + +H  +    ++ +  + T L+  Y+
Sbjct: 398 LFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYA 457

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG + +A ++F  M E K+ V+W  MI G+  +G    A+  + +M   G  P+  T+ 
Sbjct: 458 KCGNISEAWQLFDSMSE-KNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFL 516

Query: 387 IILTA 391
            +L A
Sbjct: 517 SVLYA 521



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 1/175 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD SP++  V +N ++  Y ++   + A++LF  + +        T++++L  C  L  
Sbjct: 367 LFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGS 426

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG+ VH          ++ VST+LVD+Y +  N+ +  ++FD M+E N V+W +++ G
Sbjct: 427 LSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFG 486

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIK 207
           Y  +      L+L++ M   G  P++ TF +VL   +  G+V    ++ H MV K
Sbjct: 487 YGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNK 541


>gi|413949122|gb|AFW81771.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 684

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/544 (48%), Positives = 362/544 (66%), Gaps = 18/544 (3%)

Query: 61  EALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTS 118
           +AL+ FL   RR G  + G  L  ++K CG + D V G+Q+H  CV+ G    D+ V TS
Sbjct: 31  QALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHARCVRCGHDHGDIRVGTS 90

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           LVD+YM   +V +GR+VF+ M + NVV+WTSLL+GY +  +   V+ LF RM+ EG+ PN
Sbjct: 91  LVDMYMNWYSVLNGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPN 150

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM-VRDARAVF 237
            FTFS+VL V+A +      + +H + ++   E           MY K  + V +AR VF
Sbjct: 151 PFTFSSVLSVVASQ----VWLLLHCVCVQFSDE-----------MYAKCGLLVEEARVVF 195

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
             ME RD ++WN+++AG V N   +EA + F++   +   LT ST+ +VIKLCA  K L 
Sbjct: 196 CRMETRDMVSWNTLMAGLVLNGRDLEALKLFHDSRSSITMLTESTYSTVIKLCANLKHLG 255

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           LARQLHS VLK G     N+ T LM AYSK G+++ A  IF +M   ++VVSWTAMI+G 
Sbjct: 256 LARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLDKALDIFLLMSGSQNVVSWTAMINGC 315

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT 417
           +QNG I LA   F +M  +GV PN  TYS ILT   A  P Q HA +IKTNYE +  VGT
Sbjct: 316 IQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQSHAQVIKTNYECTPIVGT 375

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           AL+ +Y K    +EA  +F++ID+KD+V+WSAML  YAQ GD  GA   + +++  G+KP
Sbjct: 376 ALMVSYSKLCGTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMSMHGLKP 435

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           NEFT SS I+AC +P+A V+ G+QFHA SI+ + + ALCVSSALV+MY++KG+IE+A  V
Sbjct: 436 NEFTISSAIDACASPAAGVDLGRQFHAISIRHRCHYALCVSSALVSMYARKGSIENAQCV 495

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           F++Q  RDLVS NSM+ GYAQHG+ +KAL+VF++M  + +E DG+TF+ VI  CTHAGLV
Sbjct: 496 FEKQTDRDLVSGNSMLSGYAQHGYNQKALDVFRQMEVEGIEMDGLTFLSVIMGCTHAGLV 555

Query: 598 DEGQ 601
           +EG+
Sbjct: 556 EEGK 559



 Score =  308 bits (790), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 206/643 (32%), Positives = 326/643 (50%), Gaps = 54/643 (8%)

Query: 185 VLGVLADEGIVATAV---QVHTMVIKNG---GEVVTSVCNALISMYLKSKMVRDARAVFD 238
           +LG++   G V   V   Q+H   ++ G   G++   V  +L+ MY+    V + R VF+
Sbjct: 52  LLGIIKICGSVPDRVLGKQLHARCVRCGHDHGDI--RVGTSLVDMYMNWYSVLNGRKVFE 109

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
           GM  R+ +TW S++ GY+   + ++    F  M   G      TF SV+ + A+   L L
Sbjct: 110 GMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSVVASQVWLLL 169

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
               H       + F   +       Y+KCG + + +++     E +D+VSW  +++G +
Sbjct: 170 ----HCVC----VQFSDEM-------YAKCGLLVEEARVVFCRMETRDMVSWNTLMAGLV 214

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
            NG    A+  F             TYS ++     +       Q+H+ ++K  +    +
Sbjct: 215 LNGRDLEALKLFHDSRSSITMLTESTYSTVIKLCANLKHLGLARQLHSSVLKRGFHSYGN 274

Query: 415 VGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           V TAL++AY K G LD+A  +F L+   +++V+W+AM+ G  Q GD   A  ++ ++  +
Sbjct: 275 VMTALMDAYSKAGQLDKALDIFLLMSGSQNVVSWTAMINGCIQNGDIPLAAALFSRMRED 334

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           GV PN+ T+S+++    A         Q HA  IK        V +AL+  YSK    E 
Sbjct: 335 GVAPNDLTYSTILTVSEASFP-----PQSHAQVIKTNYECTPIVGTALMVSYSKLCGTEE 389

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC-T 592
           A  +FK   ++D+VSW++M+  YAQ G    A   F +M    L+ +  T    I AC +
Sbjct: 390 ALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMSMHGLKPNEFTISSAIDACAS 449

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR---------- 642
            A  VD G+Q+  I +  H  +  +   S +V +Y+R G +E A  +  +          
Sbjct: 450 PAAGVDLGRQFHAISI-RHRCHYALCVSSALVSMYARKGSIENAQCVFEKQTDRDLVSGN 508

Query: 643 --MPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAAT-------GHWQERARVRK 693
             +   A     +  L   R + ++  +      LS +   T       G W+E+  VRK
Sbjct: 509 SMLSGYAQHGYNQKALDVFRQMEVEGIEMDGLTFLSVIMGCTHAGLVEEGKWKEKDEVRK 568

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
           LM+ +KVKKEAG SWI++KNK + F+A D SHP S QIY+KL  ++ +LK  GY PDTS+
Sbjct: 569 LMDTKKVKKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRSMTAKLKQEGYCPDTSF 628

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           VL D+ ++ KEA+L+ HSERL +AFGL+A P GAPL I KNLR
Sbjct: 629 VLHDVAEDQKEAMLAMHSERLVLAFGLIAIPPGAPLHIFKNLR 671



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/482 (31%), Positives = 246/482 (51%), Gaps = 40/482 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+   +RN V +  LL  Y +  +  + ++LF  +R  G+     T SSVL      
Sbjct: 105 RKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLS----- 159

Query: 92  FDHVFGRQV----HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              V   QV    HC CV+  F+ ++     L+        VE+ R VF  M   ++VSW
Sbjct: 160 ---VVASQVWLLLHCVCVQ--FSDEMYAKCGLL--------VEEARVVFCRMETRDMVSW 206

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            +L++G   N  +   L+LFH  +         T+STV+ + A+   +  A Q+H+ V+K
Sbjct: 207 NTLMAGLVLNGRDLEALKLFHDSRSSITMLTESTYSTVIKLCANLKHLGLARQLHSSVLK 266

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTN---ELHME 263
            G     +V  AL+  Y K+  +  A  +F  M   ++ ++W +M+ G + N    L   
Sbjct: 267 RGFHSYGNVMTALMDAYSKAGQLDKALDIFLLMSGSQNVVSWTAMINGCIQNGDIPLAAA 326

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
            F      G+A  +LT ST ++V        E     Q H+QV+K   +    + T LMV
Sbjct: 327 LFSRMREDGVAPNDLTYSTILTV-------SEASFPPQSHAQVIKTNYECTPIVGTALMV 379

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
           +YSK    E+A  IF M+ + KDVVSW+AM++ + Q G  + A N F +M+  G++PN F
Sbjct: 380 SYSKLCGTEEALSIFKMI-DQKDVVSWSAMLTCYAQAGDCNGATNAFIKMSMHGLKPNEF 438

Query: 384 TYS--IILTAQPAVS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           T S  I   A PA       Q HA  I+     +  V +AL++ Y +KG ++ A  VFE 
Sbjct: 439 TISSAIDACASPAAGVDLGRQFHAISIRHRCHYALCVSSALVSMYARKGSIENAQCVFEK 498

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
             ++D+V+ ++ML+GYAQ G  + A+ ++RQ+  EG++ +  TF SVI  CT  +  VE+
Sbjct: 499 QTDRDLVSGNSMLSGYAQHGYNQKALDVFRQMEVEGIEMDGLTFLSVIMGCTH-AGLVEE 557

Query: 499 GK 500
           GK
Sbjct: 558 GK 559


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 266/658 (40%), Positives = 385/658 (58%), Gaps = 21/658 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H ++I  G    T + N L++MY K   +  A  +FD M  R+ ++W +M++G   N 
Sbjct: 26  QLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNS 85

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA  TF  M + G   T+  F S I+ CA+   + + +Q+H   LK GI  +  + +
Sbjct: 86  KFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGS 145

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L   YSKCG M DA K+F  M   KD VSWTAMI G+ + G  + A+  F +M  E V 
Sbjct: 146 NLEDMYSKCGAMFDACKVFEEM-PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVT 204

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            +       L A  A+   +    VH+ ++K  +E    VG AL + Y K G ++ A+ V
Sbjct: 205 IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNV 264

Query: 436 FELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           F +  E +++V+++ ++ GY +    E  + ++ +L  +G++PNEFTFSS+I AC A  A
Sbjct: 265 FGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC-ANQA 323

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A+EQG Q HA  +K   +    VSS LV MY K G +E A + F        ++WNS++ 
Sbjct: 324 ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVS 383

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            + QHG  K A+++F+ M  + ++ + ITFI ++T C+HAGLV+EG  YF  M   + + 
Sbjct: 384 VFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 443

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  EHYSC++DL  RAG L++A + INRMPF  +A  W + L ACR              
Sbjct: 444 PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEK 503

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L+ L+P +S   VLLSN+YA    W++   VR  M D  VKK  GYSW++V  KT+ F A
Sbjct: 504 LVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 563

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
            D SHP+ + IY KL+ L  ++K AGY P T  V  D+DD  KE +L +HSER+A+AF L
Sbjct: 564 EDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFAL 623

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++ P G P+ + KNLRVC DCH+ IK ISK+  R I+VRD +RFHHF +G CSCGDYW
Sbjct: 624 ISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 238/469 (50%), Gaps = 5/469 (1%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H   + +G+     ++  LV++Y +   ++   ++FD M + N+VSWT+++SG ++
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      +  F  M++ G  P  F FS+ +   A  G +    Q+H + +K G      V
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            + L  MY K   + DA  VF+ M  +D ++W +M+ GY       EA   F  M     
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            + +    S +  C   K  +  R +HS V+K G + D  +   L   YSK G ME AS 
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QP 393
           +F +  E ++VVS+T +I G+++   I+  ++ F ++ R+G+ PN FT+S ++ A   Q 
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 394 AVSP-FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
           A+    Q+HA ++K N+++   V + L++ Y K G+L++A + F+ I +   +AW+++++
Sbjct: 324 ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVS 383

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            + Q G  + A+KI+ ++   GVKPN  TF S++  C+      E    F++      + 
Sbjct: 384 VFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 443

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
                 S ++ +  + G ++ A E   R   + +   W S +     HG
Sbjct: 444 PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 199/364 (54%), Gaps = 10/364 (2%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           VI+  A TK LR  +QLH+ ++  G      +   L+  YSKCG+++ A K+F  M + +
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ-R 69

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVH 401
           ++VSWTAMISG  QN     A+  FC M   G  P  F +S  + A  ++       Q+H
Sbjct: 70  NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 129

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
              +K        VG+ L + Y K G + +A KVFE +  KD V+W+AM+ GY++IG+ E
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 189

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+  ++++  E V  ++    S + AC A  A  + G+  H+  +K    + + V +AL
Sbjct: 190 EALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC-KFGRSVHSSVVKLGFESDIFVGNAL 248

Query: 522 VTMYSKKGNIESASEVFKRQRK-RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
             MYSK G++ESAS VF    + R++VS+  +I GY +    +K L VF E+RRQ +E +
Sbjct: 249 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 308

Query: 581 GITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
             TF  +I AC +   +++G Q +  +M       P +   S +VD+Y + G+LE+A+  
Sbjct: 309 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEQAIQA 366

Query: 640 INRM 643
            + +
Sbjct: 367 FDEI 370



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 203/442 (45%), Gaps = 22/442 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  PQRN V +  ++    ++S   EA+  F G+R  G        SS ++ C  L  
Sbjct: 62  LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+HC  +K G   ++ V ++L D+Y +   + D  +VF++M   + VSWT+++ G
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y++    +  L  F +M  E +  +     + LG             VH+ V+K G E  
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 241

Query: 214 TSVCNALISMYLKSKMVRDARAVFD-GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             V NAL  MY K+  +  A  VF    E R+ +++  ++ GYV  E   +    F  + 
Sbjct: 242 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 301

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G E    TF S+IK CA    L    QLH+QV+K   D D  + + L+  Y KCG +E
Sbjct: 302 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 361

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A + F  + +  + ++W +++S   Q+G    A+  F +M   GV+PN  T+  +LT  
Sbjct: 362 QAIQAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGC 420

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDEAAKVFELID 440
                   HA +++   +  +S+             + +++   + G L EA +    + 
Sbjct: 421 S-------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP 473

Query: 441 -EKDIVAWSAMLAGYAQIGDTE 461
            E +   W + L      GD E
Sbjct: 474 FEPNAFGWCSFLGACRIHGDKE 495



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 1/154 (0%)

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A +  + +GKQ HA  I A       +++ LV MYSK G ++ A ++F    +R+LVSW 
Sbjct: 16  AKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWT 75

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           +MI G +Q+    +A+  F  MR          F   I AC   G ++ G+Q    +  +
Sbjct: 76  AMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ-MHCLALK 134

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             I   +   S + D+YS+ G +  A  +   MP
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/646 (40%), Positives = 380/646 (58%), Gaps = 28/646 (4%)

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           +CN LI +Y K     DA AVF G++ ++  +W  M+A +  N      +  F  M L G
Sbjct: 12  LCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQG 71

Query: 276 ---AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               E+  S F+S    C   +E+ + R +   +L  GI+ +  ++T L+  Y K G   
Sbjct: 72  INPGEVGISIFLSA---CTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCT 128

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA+ +F  M   +DVV+W+AM++ + +NG    A+  F QM  +GV PN  T    L A 
Sbjct: 129 DAASVFLRMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDAC 187

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            ++   +    +H  +     +    VGTAL+N Y K G ++ AA+ F  I EK++VAWS
Sbjct: 188 ASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWS 247

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA--CS 506
           A+ A YA+      A+++  ++  EG+ PN  TF SV++AC A  AA++QG++ H     
Sbjct: 248 AISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAI-AALKQGRRIHERIHV 306

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +   L + + V +ALV MYSK GN+  A  +F +    DLV WNS+I   AQHG T+KAL
Sbjct: 307 LGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKAL 366

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           E+F+ MR + L+   ITF  V+ AC+HAG++D+G+++F   + +H I+P  EH+ CMVDL
Sbjct: 367 ELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDL 426

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
             RAG +  + D++  MPF      W   L ACR              L  L P   A Y
Sbjct: 427 LGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPY 486

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VLLSNMYA  G W + AR+R+ M      KEAG SWIEVK++ + F++GD+ HP+  +I+
Sbjct: 487 VLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIH 546

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           ++L+ L+  +K AGY PDT  VL D+  E KE ++  HSE+LA+AF L+ TP G+P+++V
Sbjct: 547 AELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVV 606

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLRVC DCHT  K ISKL  R+IVVRD NRFH F+ G CSCGDYW
Sbjct: 607 KNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 207/400 (51%), Gaps = 8/400 (2%)

Query: 108 GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELF 167
           G+ R+  +   L+DLY + +  +D   VF  +   NV SWT +L+ +A N+  DR    F
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64

Query: 168 HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
             M ++GI P     S  L    D   +     +   ++  G E  + V  AL+S+Y K 
Sbjct: 65  RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL 124

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
               DA +VF  M  RD + W++MVA Y  N    EA   F  M L G    + T VS +
Sbjct: 125 GHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGL 184

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
             CA+  +LR    +H +V   GI     + T L+  Y KCG++E A++ F  + E K+V
Sbjct: 185 DACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVE-KNV 243

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHA- 402
           V+W+A+ + + +N     A+    +M  EG+ PN  T+  +L A  A++  +    +H  
Sbjct: 244 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHER 303

Query: 403 -HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
            H++    E    V TAL+N Y K G L  A  +F+ I   D+V W++++A  AQ G TE
Sbjct: 304 IHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTE 363

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            A++++ ++  EG++P   TF+SV+ AC+  +  ++QG++
Sbjct: 364 KALELFERMRLEGLQPTIITFTSVLFACS-HAGMLDQGRK 402



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 180/373 (48%), Gaps = 8/373 (2%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            Y+K D+     ++F     +N   +  +L  +  +         F G+   G+      
Sbjct: 19  LYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVG 78

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           +S  L  C    +   GR +    + +G   +  V T+LV LY +  +  D   VF  M+
Sbjct: 79  ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMS 138

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             +VV+W+++++ YARN      L LF +M ++G+ PN  T  + L   A  G + +   
Sbjct: 139 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGAL 198

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  V   G +    V  AL+++Y K   +  A   F  + +++ + W+++ A Y  N+ 
Sbjct: 199 MHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDR 258

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ--VLKNGIDFDHNIR 318
           + +A    + M L G     +TFVSV+  CA    L+  R++H +  VL  G++ D  + 
Sbjct: 259 NRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVL 318

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  YSKCG +  A  +F  +  + D+V W ++I+ + Q+G  + A+  F +M  EG+
Sbjct: 319 TALVNMYSKCGNLALAGNMFDKIAHL-DLVLWNSLIATNAQHGQTEKALELFERMRLEGL 377

Query: 379 RPNGFTYSIILTA 391
           +P   T++ +L A
Sbjct: 378 QPTIITFTSVLFA 390


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 301/829 (36%), Positives = 442/829 (53%), Gaps = 75/829 (9%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           L+S+L++CG   D   GR +H   V SG A     ++  L+ +Y    ++    R+F  M
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST----VLGV------- 188
              N VSWT+L+SG ++N M+   L  F  M+  G+ P    + T     LG        
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 189 ----------------LADEGIVATAVQVHT----------------------MVIKNGG 210
                           L      A A  VH                       +V+    
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              T + N LI+MY     +  A  +F  M  R++++W ++V+G   N +H +A   F  
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M  AG   TR    S  +  A       AR   +     G D +  + + L   YSKCG 
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGL 321

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIIL 389
           + +A ++F  M + KD V+WTAMI G+ +NG+++ AV  F  M REG V  +   +  +L
Sbjct: 322 LSEACRVFDQMPQ-KDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVL 380

Query: 390 TAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK--D 443
           +A   +        +H  + K  +E   +V  AL++ Y K   ++ A++V + ID    +
Sbjct: 381 SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK-IDPGGWN 439

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+ ++M+ GY +    E A+ IY +L  +GV+PNEFTFSS+I  C A  A +EQG Q H
Sbjct: 440 VVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGC-AMQALLEQGAQLH 498

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A  IK  L     V S LV MY K G I  + ++F     R  ++WN++I  +AQHGH +
Sbjct: 499 AQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGR 558

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +A++ F  M    +  + I F+ ++TAC+HAGLVDEG +YF  M   H I P  EHYSC+
Sbjct: 559 EAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCI 618

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
           +D Y RAG L++A   I+ MP   +A  W ++L ACR              L+ L+P ++
Sbjct: 619 IDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNT 678

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
            I+V LS +YA+ G W++   VRKLM D ++KK  G+SW++   KT+ F + D SHPQ  
Sbjct: 679 GIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQK 738

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            IY KLEEL+TR+K+ GY PDTS++  +++D  KE IL  HSER+A+AF L++ PA  P+
Sbjct: 739 DIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPI 798

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            + KNLR+C DCHT  K I K+ERRDI+VRD +RFHHF  G CSCGDYW
Sbjct: 799 IVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 214/471 (45%), Gaps = 59/471 (12%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF   P+RN V +  L+    ++ +H +AL  F  +RR G+      LSS  +    L  
Sbjct: 228 LFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGA 287

Query: 94  HVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            +  R   C    S GF  ++ V+++L D+Y +   + +  RVFD M + + V+WT+++ 
Sbjct: 288 PLRARS--CTASASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMID 345

Query: 153 GYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKN 208
           GYA+N   +  +  F  M+ EG +  +   F +VL   G L D  +  +   +H  V K 
Sbjct: 346 GYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKS---IHCCVTKA 402

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN-----SMVAGYVTNELHME 263
           G E+  +V NALI MY KS  V  A  V       D   WN     SM+ GY+  +   E
Sbjct: 403 GFELEVAVRNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEE 458

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   +  +   G E    TF S+IK CA    L    QLH+QV+K  +  D  + + L+ 
Sbjct: 459 ALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVD 518

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y KCG +  + ++F+ + E +  ++W A+I+   Q+G    A+  F +M   G+RPN  
Sbjct: 519 MYGKCGLISLSMQLFNEI-EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHI 577

Query: 384 TYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            +                                +LL A    G++DE  K F  + E  
Sbjct: 578 AF-------------------------------VSLLTACSHAGLVDEGLKYFYSMKEAH 606

Query: 444 IVA-----WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            +      +S ++  Y + G  + A K   ++    +KPN + + S++ AC
Sbjct: 607 GIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP---IKPNAYGWCSLLGAC 654



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 167/338 (49%), Gaps = 7/338 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTCGC 90
           +FD+ PQ++ V +  ++  Y ++   + A+  F  ++R GL   G+      SVL   G 
Sbjct: 328 VFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGL--VGADQHVFCSVLSASGG 385

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-DMNESNVVSWTS 149
           L D    + +HC   K+GF  +V V  +L+D+Y ++ +VE   RV   D    NVVS TS
Sbjct: 386 LKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTS 445

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GY      +  L ++  ++ +G++PN FTFS+++   A + ++    Q+H  VIK  
Sbjct: 446 MIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTD 505

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
               + V + L+ MY K  ++  +  +F+ +E R  I WN+++  +  +    EA + F+
Sbjct: 506 LIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFD 565

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            M  +G       FVS++  C+    +    +  +S    +GI+      + ++  Y + 
Sbjct: 566 RMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRA 625

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           G++++A K  S M    +   W +++      G+ +L 
Sbjct: 626 GRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELG 663



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 85/398 (21%), Positives = 145/398 (36%), Gaps = 82/398 (20%)

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYSKCGKME 332
           A A  T     S+++ C    +LR  R LH++++ +G       +   L+  YS C  + 
Sbjct: 14  APAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 73

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL--T 390
            A ++F+ M   ++ VSWT ++SG  QN     A+  F  M R GV P    Y      T
Sbjct: 74  SALRLFAAMPR-RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNT 132

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
             P  +    H H            G  L+  Y  + +    A           V  +++
Sbjct: 133 LGPKHTLAASHCH-----------SGPTLMVKYWGQRLWRPPAPA-----AATTVHLASL 176

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           L    + GD      ++ +L   G      TF                            
Sbjct: 177 LQSCGRAGDLRRGRLLHARLVLSGAAAAS-TF---------------------------- 207

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
                 +++ L+TMYS   ++ SA  +F    +R+ VSW +++ G +Q+     AL  F 
Sbjct: 208 ------LANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFA 261

Query: 571 EMRRQDLE------------FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
            MRR  +                +       +CT +  V    + F              
Sbjct: 262 AMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVA------------ 309

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
             S + D+YS+ G+L +A  + ++MP    A  W  ++
Sbjct: 310 --SNLADMYSKCGLLSEACRVFDQMP-QKDAVAWTAMI 344


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 262/737 (35%), Positives = 433/737 (58%), Gaps = 44/737 (5%)

Query: 120 VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
           +  +MR  + +    VF+ M   + VS+ +++SGY RN   +    LF +M    +    
Sbjct: 56  ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL---- 111

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           F+++ +L        +  A ++  ++ +   +VV+   N+L+S Y ++  V +AR VFD 
Sbjct: 112 FSWNVMLTGYVRNCRLGDARRLFDLMPEK--DVVS--WNSLLSGYAQNGYVDEAREVFDN 167

Query: 240 MEDRDSITWNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           M +++SI+WN ++A YV N    EA   FE+ ++  L         FV         K+L
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVR-------KKKL 220

Query: 297 RLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             AR L  ++ +++ I ++      ++  Y++ G +  A ++F      +DV +WTAM+S
Sbjct: 221 GDARWLFDKMPVRDAISWNT-----MISGYAQGGGLSQARRLFDE-SPTRDVFTWTAMVS 274

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV 415
           G++QNG +D A  FF +M  +    N  +Y+ ++          +   + ++   ++ S 
Sbjct: 275 GYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCRNISS 330

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
              ++  Y + G + +A K F+++ ++D V+W+A++AGYAQ G  E A+ ++ ++  +G 
Sbjct: 331 WNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
             N  TF   ++ C A  AA+E GKQ H  ++K        V +AL+ MY K G+I+ A+
Sbjct: 391 SLNRATFGCALSTC-ADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAN 449

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           + F+   ++D+VSWN+M+ GYA+HG  ++AL VF+ M+   ++ D IT +GV++AC+H G
Sbjct: 450 DTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
           L+D G +YF  M  ++ + PT +HY+CM+DL  RAG LE+A D+I  MPF   A  W  +
Sbjct: 510 LLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGAL 569

Query: 656 LAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
           L A R+                ++P +S +YVLLSN+YAA+G W +  ++R  M D  V+
Sbjct: 570 LGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQ 629

Query: 702 KEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE 761
           K  GYSW+EV+NK ++F  GD SHP+  +IY+ LEEL  ++++ GY   T  VL D+++E
Sbjct: 630 KVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEE 689

Query: 762 HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
            KE +L  HSE+LA+AFG++  P G P++++KNLRVC DCH+ IK ISK+  R I++RD+
Sbjct: 690 EKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDS 749

Query: 822 NRFHHFKEGLCSCGDYW 838
           +RFHHF EG CSCGDYW
Sbjct: 750 HRFHHFNEGFCSCGDYW 766



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 152/557 (27%), Positives = 263/557 (47%), Gaps = 45/557 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC--- 90
           +F+  P+R+ V YN ++  Y R+S    A NLF  +    L  +   L+  ++ C     
Sbjct: 71  VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDA 130

Query: 91  --LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             LFD +               +DV    SL+  Y +   V++ R VFD+M E N +SW 
Sbjct: 131 RRLFDLMP-------------EKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWN 177

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIK 207
            LL+ Y  N   +    LF          +  +++ ++G    +  +  A  +   M ++
Sbjct: 178 GLLAAYVHNGRIEEACLLFESKS----DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR 233

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +         N +IS Y +   +  AR +FD    RD  TW +MV+GYV N +  EA   
Sbjct: 234 D-----AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTF 288

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M     E    ++ ++I     TK++ +AR+L   +    I   + + TG    Y +
Sbjct: 289 FDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITG----YGQ 340

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G +  A K F MM + +D VSW A+I+G+ Q+G  + A+N F ++ ++G   N  T+  
Sbjct: 341 IGDIAQARKFFDMMPQ-RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGC 399

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            L+    ++      Q+H   +K  Y     VG ALL  Y K G +DEA   FE I+EKD
Sbjct: 400 ALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+ MLAGYA+ G    A+ ++  + + GVKP+E T   V++AC+         + F+
Sbjct: 460 VVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFY 519

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
           + +    +       + ++ +  + G +E A ++ +    +    SW +++     HG+T
Sbjct: 520 SMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNT 579

Query: 563 ---KKALEVFKEMRRQD 576
              +KA E+  +M  Q+
Sbjct: 580 ELGEKAAEMVFKMEPQN 596



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 49/454 (10%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y  + + +FD  P++N + +N LL  Y  +   +EA  LF       L  +   +   ++
Sbjct: 157 YVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVR 216

Query: 87  T-----CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
                    LFD +               RD     +++  Y +   +   RR+FD+   
Sbjct: 217 KKKLGDARWLFDKM-------------PVRDAISWNTMISGYAQGGGLSQARRLFDESPT 263

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            +V +WT+++SGY +N M D     F  M     + N  +++ ++        +  A ++
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIAREL 319

Query: 202 -HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
             +M  +N      S  N +I+ Y +   +  AR  FD M  RD ++W +++AGY  +  
Sbjct: 320 FESMPCRN-----ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGH 374

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           + EA   F  +   G  L R+TF   +  CA    L L +Q+H Q +K G      +   
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y KCG +++A+  F  + E KDVVSW  M++G+ ++G    A+  F  M   GV+P
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIEE-KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKP 493

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGI 428
           +  T   +L+A         H  ++    E  +S+             T +++   + G 
Sbjct: 494 DEITMVGVLSACS-------HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546

Query: 429 LDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
           L+EA  +   +  +    +W A+L      G+TE
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTE 580



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 174/354 (49%), Gaps = 36/354 (10%)

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
           D++ W   IS H++NG  D A++ F  M R     +  +Y+ +++     S F +  ++ 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNLARNLF 103

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
               E+       +L  YV+   L +A ++F+L+ EKD+V+W+++L+GYAQ G  + A +
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI-KAKLNNALCVSSALVTM 524
           ++  +  +    N  +++ ++      +A V  G+   AC + ++K +  L   + L+  
Sbjct: 164 VFDNMPEK----NSISWNGLL------AAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           + +K  +  A  +F +   RD +SWN+MI GYAQ G   +A  +F E   +D+     T+
Sbjct: 214 FVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV----FTW 269

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             +++     G++DE + +FD M  ++ +      Y+ M+  Y +   ++ A ++   MP
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAMIAGYVQTKKMDIARELFESMP 324

Query: 645 FAASATVWRTVLA----------ACRLISLQPH-DSAIYVLLSNMYAATGHWQE 687
              + + W T++           A +   + P  D   +  +   YA +GH++E
Sbjct: 325 -CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEE 377



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 204/467 (43%), Gaps = 76/467 (16%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N  IS ++++     A  VF+ M  R S+++N+M++GY+ N         FN        
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN-------SKFN-------- 97

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                               LAR L  Q+ +  + F  N+   ++  Y +  ++ DA ++
Sbjct: 98  --------------------LARNLFDQMPERDL-FSWNV---MLTGYVRNCRLGDARRL 133

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F +M E KDVVSW +++SG+ QNG +D A   F  M  +    N  +++ +L A      
Sbjct: 134 FDLMPE-KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGR 188

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            +    + ++  +        L+  +V+K  L +A  +F+ +  +D ++W+ M++GYAQ 
Sbjct: 189 IEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQG 248

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN-NALC 516
           G    A    R+L  E    + FT++++++         E    F     K +++ NA+ 
Sbjct: 249 GGLSQA----RRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMI 304

Query: 517 VS-------------------------SALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
                                      + ++T Y + G+I  A + F    +RD VSW +
Sbjct: 305 AGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAA 364

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +I GYAQ GH ++AL +F E+++     +  TF   ++ C     ++ G+Q     V   
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +        + ++ +Y + G +++A D    +        W T+LA 
Sbjct: 425 YGTGCFVG-NALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAG 469



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 49/250 (19%)

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           + GL+D G +YF  M  E+ + PT +HY+CM+DL  R   LE+   +       AS    
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEGALL------GASRIHG 829

Query: 653 RTVL---AACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
            T L   AA     + P +S I                       M D  V+K  GYSW 
Sbjct: 830 NTELGEKAAQMFFKMGPQNSGI---------------------SKMRDVGVQKVPGYSWF 868

Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
           EV+NK ++F  G     +   I   LEEL  ++++   + + +              L  
Sbjct: 869 EVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERT--------------LKY 913

Query: 770 HSERLAIAFGLVATPAGAPLQIVKN-LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            SE LA A G++  P G P +++K  + VC DC + IK +SK+  R I +RD+   H F 
Sbjct: 914 LSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDS---HRFN 970

Query: 829 EGLCSCGDYW 838
           E +CSCG+YW
Sbjct: 971 ESICSCGEYW 980


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/707 (37%), Positives = 403/707 (57%), Gaps = 21/707 (2%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +L GYA++   D  L  F RM+ + ++P  + F+ +L +  D   +    ++H  VI +G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                     +++MY K + + DA  +FD M +RD + WN+M++GY  N     A     
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G      T VS++   A T+ LR+   +H  VL+ G +   N+ T L+  YSKCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +  A  IF  M + + VVSW +MI G++Q+G  + A+  F +M  EGV+P   T    L
Sbjct: 181 SVSIARVIFDGM-DHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   +   +    VH  + +   +   SV  +L++ Y K   +D AA +F+ +  K +V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AM+ GYAQ G    A+  + ++ S  +KP+ FT  SVI A    S    Q K  H  
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIP-RQAKWIHGL 358

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            I+  L+  + V +ALV MY+K G I +A ++F     R +++WN+MI GY  HG  K +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           +E+FKEM++  ++ + ITF+  ++AC+H+GLV+EG  +F+ M  ++ I PTM+HY  MVD
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           L  RAG L +A D I +MP     TV+  +L AC+              +  L P D   
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGY 538

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           +VLL+N+YA    W + A+VR +M    ++K  G S +E+ N+ +SF +G  SHPQS +I
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKI 598

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           YS LE L   ++ AGY PDT+ +  D++D+ K  +L+ HSE+LAIAFGL+ T  G P+ I
Sbjct: 599 YSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHI 657

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVCGDCH   K IS +  R+I+VRD +RFH FK+G+CSCGDYW
Sbjct: 658 RKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 280/532 (52%), Gaps = 12/532 (2%)

Query: 49  LLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSG 108
           +L  Y + S    AL+ F  ++   +       + +LK CG   D   G+++H   + SG
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 109 FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
           F+ ++   T +V++Y +   + D   +FD M E ++V W +++SGYA+N      L L  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           RM  EG +P+S T  ++L  +AD  ++   + VH  V++ G E + +V  AL+ MY K  
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            V  AR +FDGM+ R  ++WNSM+ GYV +     A   F  M   G + T  T +  + 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            CA   +L   + +H  V +  +D D ++   L+  YSKC +++ A+ IF  +R  K +V
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN-KTLV 299

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-PFQ---VHAHI 404
           SW AMI G+ QNG ++ A+N FC+M    ++P+ FT   ++ A   +S P Q   +H  +
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           I+   +K+  V TAL++ Y K G +  A K+F++++ + ++ W+AM+ GY   G  + +V
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA-KLNNALCVSSALVT 523
           ++++++    +KPN+ TF   ++AC+  S  VE+G  F     K   +   +    A+V 
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSH-SGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478

Query: 524 MYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT----KKALEVFK 570
           +  + G +  A +  ++   K  +  + +M+     H +     K A E+FK
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFK 530



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 185/359 (51%), Gaps = 1/359 (0%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++FDR P+R+ V +N ++  Y ++   + AL L L +   G      T+ S+L       
Sbjct: 86  NMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTR 145

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G  VH   +++GF   VNVST+LVD+Y +  +V   R +FD M+   VVSW S++ 
Sbjct: 146 LLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMID 205

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY ++   +  + +F +M  EG++P + T    L   AD G +     VH +V +   + 
Sbjct: 206 GYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDS 265

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             SV N+LISMY K K V  A  +F  + ++  ++WN+M+ GY  N    EA   F  M 
Sbjct: 266 DVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQ 325

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               +    T VSVI   A     R A+ +H  V++  +D +  + T L+  Y+KCG + 
Sbjct: 326 SRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIH 385

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            A K+F MM   + V++W AMI G+  +G    +V  F +M +  ++PN  T+   L+A
Sbjct: 386 TARKLFDMMNA-RHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSA 443



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 79/162 (48%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F     +  V +N ++  Y ++    EALN F  ++   +     T+ SV+     L  
Sbjct: 289 IFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSI 348

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
               + +H   ++    ++V V T+LVD+Y +   +   R++FD MN  +V++W +++ G
Sbjct: 349 PRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDG 408

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           Y  + +    +ELF  M+   IKPN  TF   L   +  G+V
Sbjct: 409 YGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLV 450


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/741 (35%), Positives = 420/741 (56%), Gaps = 77/741 (10%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            +++  Y+R    E  R +FD+M E ++VSW  ++ GY RN+   +  ELF RM      
Sbjct: 94  NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPER--- 150

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC--NALISMYLKSKMVRDAR 234
                                                  VC  N ++S Y ++  V DAR
Sbjct: 151 --------------------------------------DVCSWNTILSGYAQNGCVDDAR 172

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCA 291
            VFD M +++ ++WN++++ YV N    EA   F +  N  L         FV       
Sbjct: 173 RVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVK------ 226

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
             K++  ARQ    +    +   + I TG    Y++ G++++A ++F     + DV +WT
Sbjct: 227 -KKKIVEARQFFDSMKVRDVVSWNTIITG----YAQNGEIDEARQLFDE-SPVHDVFTWT 280

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK 411
           AM+SG++QN  ++ A   F +M       N  +++ +L         ++   +      +
Sbjct: 281 AMVSGYIQNRMVEEARELFDRMPER----NEVSWNAMLAGYVQGERVEMAKELFDVMPCR 336

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           + S    ++  Y + G + EA  +F+ + ++D V+W+AM+AGY+Q G +  A++++  + 
Sbjct: 337 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLME 396

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
            EG + N  +FSS ++ C A   A+E GKQ H   +K        V +AL+ MY K G+I
Sbjct: 397 REGGRLNRSSFSSALSTC-ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 455

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           E A+++FK    +D+VSWN+MI GY++HG  ++AL  F+ M+R+ L+ D  T + V++AC
Sbjct: 456 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSAC 515

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           +H GLVD+G+QYF  M  ++ + P  +HY+CMVDL  RAG+LE+A +++  MPF   A +
Sbjct: 516 SHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAI 575

Query: 652 WRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
           W T+L A R              + +++P +S +YVLLSN+YA++G W +  ++R  M D
Sbjct: 576 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 635

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
           + VKK  GYSWIE++NKT++F  GD  HP+ ++I++ LE+L  R+K AGY   TS VL D
Sbjct: 636 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHD 695

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           +++E KE ++  HSERLA+A+G++   +G P++++KNLRVC DCH  IK ++K+  R I+
Sbjct: 696 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLII 755

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           +RD NRFHHFK+G CSCGDYW
Sbjct: 756 LRDNNRFHHFKDGSCSCGDYW 776



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 269/539 (49%), Gaps = 34/539 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F R P+ + V YN ++  Y R+   + A  LF  +    L      +S  +   G + +
Sbjct: 81  VFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDL------VSWNVMIKGYVRN 134

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+    E  +    RDV    +++  Y +   V+D RRVFD M E N VSW +LLS 
Sbjct: 135 RNLGKAR--ELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSA 192

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGGEV 212
           Y +N   +    LF   +   +     +++ +LG    +  +  A Q   +M ++   +V
Sbjct: 193 YVQNSKLEEACVLFGSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMKVR---DV 245

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
           V+   N +I+ Y ++  + +AR +FD     D  TW +MV+GY+ N +  EA E F+ M 
Sbjct: 246 VS--WNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM- 302

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               E    ++ +++      + + +A++L   +    +   + + TG    Y++CGK+ 
Sbjct: 303 ---PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITG----YAQCGKIS 355

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  +F  M + +D VSW AMI+G+ Q+G    A+  F  M REG R N  ++S  L+  
Sbjct: 356 EAKNLFDKMPK-RDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTC 414

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             V       Q+H  ++K  YE    VG ALL  Y K G ++EA  +F+ +  KDIV+W+
Sbjct: 415 ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWN 474

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSI 507
            M+AGY++ G  E A++ +  +  EG+KP++ T  +V++AC+  +  V++G+Q FH  + 
Sbjct: 475 TMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSH-TGLVDKGRQYFHTMTQ 533

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
              +       + +V +  + G +E A  + K    + D   W +++     HG+T+ A
Sbjct: 534 DYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 592



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 158/340 (46%), Gaps = 17/340 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD SP  +   +  ++  Y ++ + +EA  LF  +       + + L+         
Sbjct: 265 RQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAG-------- 316

Query: 92  FDHVFGRQVHCECVKSGF----ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             +V G +V  E  K  F     R+V+   +++  Y +   + + + +FD M + + VSW
Sbjct: 317 --YVQGERV--EMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSW 372

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            ++++GY+++  +   L LF  M+ EG + N  +FS+ L   AD   +    Q+H  ++K
Sbjct: 373 AAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK 432

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G E    V NAL+ MY K   + +A  +F  M  +D ++WN+M+AGY  +    EA   
Sbjct: 433 GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRF 492

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYS 326
           F +M   G +   +T V+V+  C+ T  +   RQ  H+     G+  +      ++    
Sbjct: 493 FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLG 552

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           + G +E+A  +   M    D   W  ++     +G  +LA
Sbjct: 553 RAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 592



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 11/153 (7%)

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIE-SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           +K + NNA   S+   +  S +  I+ S ++   +    D+  WN  I  Y + G   +A
Sbjct: 19  LKRRYNNANSASNFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEA 78

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L VFK M R    +  +++  +I+     G  +  +  FD M     +      ++ M+ 
Sbjct: 79  LRVFKRMPR----WSSVSYNAMISGYLRNGEFELARMLFDEMPERDLV-----SWNVMIK 129

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            Y R   L KA ++  RMP       W T+L+ 
Sbjct: 130 GYVRNRNLGKARELFERMP-ERDVCSWNTILSG 161



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 14/139 (10%)

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           ++ Y + G    A  VFKR  +   VS+N+MI GY ++G  + A  +F EM  +DL    
Sbjct: 66  ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDL---- 121

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME--HYSCMVDLYSRAGMLEKAMDI 639
           +++  +I        + + ++ F+ M       P  +   ++ ++  Y++ G ++ A  +
Sbjct: 122 VSWNVMIKGYVRNRNLGKARELFERM-------PERDVCSWNTILSGYAQNGCVDDARRV 174

Query: 640 INRMPFAASATVWRTVLAA 658
            +RMP   +   W  +L+A
Sbjct: 175 FDRMP-EKNDVSWNALLSA 192


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/758 (35%), Positives = 436/758 (57%), Gaps = 29/758 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR- 156
           +++H   +  G ++++ +ST L++LY+   ++   R  FD +++ N+ SW S++S Y R 
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 157 ---NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              ++  + V +LF       ++P+ +TF  +L        +    +VH  V K G E  
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDD 155

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  +L+ +Y +  ++  A  VF  M  +D  +WN+M++G+  N     A    N M  
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G ++   T  S++ +CA + ++     +H  VLK+G+D D  +   L+  YSK G+++D
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F  M E++D+VSW ++I+ + QN     A+ FF  M   G+RP+  T   + +   
Sbjct: 276 AQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS 334

Query: 394 AVSPFQVHAHII-----KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            +S  ++   I+     +   +K   +G AL+N Y K G ++ A  VF+ +  KD ++W+
Sbjct: 335 QLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWN 394

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
            ++ GY Q G    A+  Y  +       PN+ T+ S+I A +    A++QG + HA  I
Sbjct: 395 TLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSH-VGALQQGMKIHAKLI 453

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K  L   + V++ L+ +Y K G +E A  +F    +   V WN++I     HG  ++AL+
Sbjct: 454 KNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQ 513

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +FK+M  + ++ D ITF+ +++AC+H+GLVDEGQ+ FDIM  E+ I P+++HY CMVDL 
Sbjct: 514 LFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLL 573

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
            RAG LEKA +++  MP    A++W  +L+AC              RL+ +   +   YV
Sbjct: 574 GRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYV 633

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LLSN+YA T  W+   +VR L  DR ++K  G+S + V +K   F  G+ +HP+  +IY 
Sbjct: 634 LLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYK 693

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           +L+ LS ++K  GY PD S+V QDI+++ KE IL+ HSERLAIAFG+++TP  +P++I K
Sbjct: 694 ELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFK 753

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           NLRVCGDCH   K IS++  R+IVVRD+NRFHHFK+G+
Sbjct: 754 NLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGI 791



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 273/546 (50%), Gaps = 21/546 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALN----LF--LGIRRLGLPLFGSTLSSVL 85
           +S FD   ++N   +N ++  Y R   + EA+N    LF   G   L    +  T   +L
Sbjct: 74  RSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFY--TFPPIL 131

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           K C  L D   G++VHC   K GF  DV V+ SLV LY R   ++   +VF DM   +V 
Sbjct: 132 KACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW +++SG+ +N      L + +RM+ EG+K ++ T +++L V A    V   V +H  V
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K+G +    V NALI+MY K   ++DA+ VFD ME RD ++WNS++A Y  N     A 
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL-KNGIDFDHNIRTGLMVA 324
             F  M L G      T VS+  + +   + R++R +   V+ +  +D D  I   L+  
Sbjct: 309 RFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNM 368

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM--TREGVRPNG 382
           Y+K G M  A  +F  +   KD +SW  +++G+ QNG    A++ +  M   R+ + PN 
Sbjct: 369 YAKLGYMNCAHTVFDQLPR-KDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI-PNQ 426

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T+  I+ A   V   Q    +HA +IK +      V T L++ Y K G L++A  +F  
Sbjct: 427 GTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           I     V W+A++A     G  E A+++++ + +E VK +  TF S+++AC+      E 
Sbjct: 487 IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEG 546

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYA 557
            K F     +  +  +L     +V +  + G +E A E+ +    + D   W +++    
Sbjct: 547 QKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACK 606

Query: 558 QHGHTK 563
            +G+ +
Sbjct: 607 IYGNAE 612



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 18/186 (9%)

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           K Y+  T+   K  +F  +++ N+C   +A     K+ HA  +    +  + +S+ L+ +
Sbjct: 10  KFYKSATTSLHKDADF--NALFNSCVNVNAT----KKLHALLLVFGKSQNIVLSTKLINL 63

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL----EVFKEMRRQDLEFD 580
           Y   G+I  +   F    K+++ SWNS+I  Y + G   +A+    ++F       L  D
Sbjct: 64  YVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPD 123

Query: 581 GITFIGVITACTHAGLVDEGQQYFDI--MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
             TF  ++ AC    LVD  + +  +  M  E  ++      + +V LYSR G+L+ A  
Sbjct: 124 FYTFPPILKACV--SLVDGKKVHCCVFKMGFEDDVFVA----ASLVHLYSRYGVLDVAHK 177

Query: 639 IINRMP 644
           +   MP
Sbjct: 178 VFVDMP 183


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/833 (33%), Positives = 451/833 (54%), Gaps = 32/833 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGCLF 92
           +FD    +N  ++N ++  Y R+ L+ E L  F+  I    L     T   V+K C  + 
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   G  VH   VK+G   DV V  +LV  Y     V D  ++FD M E N+VSW S++ 
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261

Query: 153 GYARNKMNDRVLELFHRMQVE----GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            ++ N  ++    L   M  E       P+  T  TVL V A E  +     VH   +K 
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             +    + NAL+ MY K   + +A+ +F    +++ ++WN+MV G+         F+  
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381

Query: 269 NNMGLAGAELTRS---TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             M LAG E  ++   T ++ + +C     L   ++LH   LK    ++  +    + +Y
Sbjct: 382 RQM-LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           +KCG +  A ++F  +R  K V SW A+I GH Q+    L+++   QM   G+ P+ FT 
Sbjct: 441 AKCGSLSYAQRVFHGIRS-KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             +L+A   +       +VH  II+   E+   V  ++L+ Y+  G L     +F+ +++
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA-PSAAVEQGK 500
           K +V+W+ ++ GY Q G  + A+ ++RQ+   G++    +   V  AC+  PS  +  G+
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS--LRLGR 617

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           + HA ++K  L +   ++ +L+ MY+K G+I  +S+VF   +++   SWN+MI GY  HG
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             K+A+++F+EM+R     D +TF+GV+TAC H+GL+ EG +Y D M +   + P ++HY
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737

Query: 621 SCMVDLYSRAGMLEKAMDII-NRMPFAASATVWRTVLAACR--------------LISLQ 665
           +C++D+  RAG L+KA+ ++   M   A   +W+++L++CR              L  L+
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 797

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P     YVLLSN+YA  G W++  +VR+ MN+  ++K+AG SWIE+  K +SF+ G+   
Sbjct: 798 PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFL 857

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
               +I S    L  ++   GY+PDT  V  D+ +E K   L  HSE+LA+ +GL+ T  
Sbjct: 858 DGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSE 917

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G  +++ KNLR+C DCH   KLISK+  R+IVVRD  RFHHFK G+CSCGDYW
Sbjct: 918 GTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 168/597 (28%), Positives = 292/597 (48%), Gaps = 24/597 (4%)

Query: 76  LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNV-STSLVDLYMRTNNVEDGRR 134
           L    L  +L+  G   D   GR++H     S   R+ +V  T ++ +Y    + +D R 
Sbjct: 82  LVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 141

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEG 193
           VFD +   N+  W +++S Y+RN++ D VLE F  M     + P+ FT+  V+   A   
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
            V   + VH +V+K G      V NAL+S Y     V DA  +FD M +R+ ++WNSM+ 
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261

Query: 254 GYVTNELHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
            +  N    E+F     M    G        +T V+V+ +CA  +E+ L + +H   +K 
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
            +D +  +   LM  YSKCG + +A  IF  M   K+VVSW  M+ G    G      + 
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380

Query: 370 FCQMTREG--VRPNGFTYSIILTAQPAV-------SPFQVHAHIIKTNYEKSFSVGTALL 420
             QM   G  V+ +  T   IL A P         S  ++H + +K  +  +  V  A +
Sbjct: 381 LRQMLAGGEDVKADEVT---ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFV 437

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
            +Y K G L  A +VF  I  K + +W+A++ G+AQ  D   ++  + Q+   G+ P+ F
Sbjct: 438 ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 497

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T  S+++AC+    ++  GK+ H   I+  L   L V  +++++Y   G + +   +F  
Sbjct: 498 TVCSLLSACSKLK-SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              + LVSWN++I GY Q+G   +AL VF++M    ++  GI+ + V  AC+    +  G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616

Query: 601 QQYFDIMVNEHHIYPTMEHYSC-MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           ++     +   H+       +C ++D+Y++ G + ++  + N +   ++A+ W  ++
Sbjct: 617 REAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMI 670



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 158/327 (48%), Gaps = 4/327 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +F     +    +N L+  + + +  + +L+  L ++  GL     T+ S+L  C  L
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G++VH   +++   RD+ V  S++ LY+    +   + +FD M + ++VSW +++
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +N   DR L +F +M + GI+    +   V G  +    +    + H   +K+  E
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 629

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  +LI MY K+  +  +  VF+G++++ + +WN+M+ GY  + L  EA + F  M
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKCG 329
              G      TF+ V+  C  +  +    +   Q +K+      N++    ++    + G
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ-MKSSFGLKPNLKHYACVIDMLGRAG 748

Query: 330 KMEDASKIFS-MMREMKDVVSWTAMIS 355
           +++ A ++ +  M E  DV  W +++S
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLS 775


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/790 (34%), Positives = 441/790 (55%), Gaps = 34/790 (4%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
           +T + +L+ C        GR++H   VK      ++ +   +V +Y   ++  D +  FD
Sbjct: 44  ATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFD 103

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            + + N+ SWT L++ +A +  +   L    RM+ +G++P++ TF T LG   D   +  
Sbjct: 104 ALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRD 163

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYV 256
            +++H MV+ +  E+   V NAL++MY K   +  A+ VF  ME  R+ I+W+ M   + 
Sbjct: 164 GIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHA 223

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
            +    EA   F  M L G + T+S  V+++  C++   ++  R +HS +  +G + +  
Sbjct: 224 LHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELL 283

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMRE-MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
           +   +M  Y +CG +E+A K+F  M E ++DVVSW  M+S ++ N     A+  + +M  
Sbjct: 284 VANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQ- 342

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
             +R +  TY  +L+A  +     +    H  I+    EK+  VG AL++ Y K G   E
Sbjct: 343 --LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTE 400

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL-------TSEGVKPNEFTFSS 484
           A  VF+ ++++ I++W+ +++ Y +      A  +++Q+       +S+ VKP+   F +
Sbjct: 401 ARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVT 460

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++NAC A  +A+EQGK     +    L++   V +A+V +Y K G IE    +F     R
Sbjct: 461 ILNAC-ADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSR 519

Query: 545 -DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
            D+  WN+MI  YAQ G + +AL++F  M  + +  D  +F+ ++ AC+H GL D+G+ Y
Sbjct: 520 PDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSY 579

Query: 604 FDIMVNEH-HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-- 660
           F  M  E+ ++  T++H+ C+ DL  R G L++A + + ++P    A  W ++LAACR  
Sbjct: 580 FTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNH 639

Query: 661 ------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                       L+ L+P  +  YV LSN+YA    W   A+VRK M ++ VKKE G S 
Sbjct: 640 RDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVST 699

Query: 709 IEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILS 768
           IE+    + F  GD +HP++ +I  +L +L +++K+ GY PDT  VL  +D++ KE +L 
Sbjct: 700 IEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLF 759

Query: 769 QHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            HSERLAIA GL++TP G PL++ KNLRVC DCHT  KLISK+  R IVVRD  RFH FK
Sbjct: 760 SHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFK 819

Query: 829 EGLCSCGDYW 838
           +G CSC DYW
Sbjct: 820 DGKCSCQDYW 829



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 281/565 (49%), Gaps = 31/565 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++ FD   QRN   +  L+  +      +E L     +R+ G+     T  + L +CG  
Sbjct: 99  KAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDP 158

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVVSWTSL 150
                G ++H   V S    D  VS +L+++Y +  ++   +RVF  M  + NV+SW+ +
Sbjct: 159 ESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIM 218

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
              +A +      L  F  M + GIK       T+L   +   +V     +H+ +  +G 
Sbjct: 219 AGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGF 278

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVAGYVTNELHMEAFETF 268
           E    V NA+++MY +   V +AR VFD M++  RD ++WN M++ YV N+   +A + +
Sbjct: 279 ESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLY 338

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M L   ++   T+VS++  C++ +++ L R LH Q++ + ++ +  +   L+  Y+KC
Sbjct: 339 QRMQLRADKV---TYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKC 395

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-------TREGVRPN 381
           G   +A  +F  M E + ++SWT +IS +++   +  A + F QM       + + V+P+
Sbjct: 396 GSHTEARAVFDKM-EQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPD 454

Query: 382 GFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
              +  IL A   VS  +    V             +VGTA++N Y K G ++E  ++F+
Sbjct: 455 ALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFD 514

Query: 438 -LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            +    D+  W+AM+A YAQ G +  A+K++ ++  EGV+P+ F+F S++ AC+  +   
Sbjct: 515 GVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACS-HTGLE 573

Query: 497 EQGKQFHAC------SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSW 549
           +QGK +         ++   + +  CV+  L     + G ++ A E  ++   K D V+W
Sbjct: 574 DQGKSYFTSMTTEYRNVTRTIQHFGCVADLL----GRGGRLKEAEEFLEKLPVKPDAVAW 629

Query: 550 NSMICGYAQHGHTKKALEVFKEMRR 574
            S++     H   K+A EV  ++ R
Sbjct: 630 TSLLAACRNHRDLKRAKEVANKLLR 654


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/745 (35%), Positives = 440/745 (59%), Gaps = 44/745 (5%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D+      +  +MR  + +   RVF+ M   + VS+ +++SGY RN       +LF +M 
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
              +    F+++ +L        +  A ++  ++ K   +VV+   NA++S Y ++  V 
Sbjct: 105 ERDL----FSWNVMLTGYVRNRRLGEAHKLFDLMPKK--DVVS--WNAMLSGYAQNGFVD 156

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIK 288
           +AR VF+ M  R+SI+WN ++A YV N    EA   FE+ +N  L         +V    
Sbjct: 157 EAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVK--- 213

Query: 289 LCATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
                  L  ARQL  ++ +++ I ++      ++  Y++ G +  A ++F+    ++DV
Sbjct: 214 ----RNMLGDARQLFDRMPVRDVISWN-----TMISGYAQVGDLSQAKRLFNE-SPIRDV 263

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
            +WTAM+SG++QNG +D A  +F +M  +    N  +Y+ +L          +   + + 
Sbjct: 264 FTWTAMVSGYVQNGMVDEARKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAGELFEA 319

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
              ++ S    ++  Y + G + +A K+F+++ ++D V+W+A+++GYAQ G  E A+ ++
Sbjct: 320 MPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMF 379

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
            ++  +G   N  TFS  ++ C A  AA+E GKQ H   +KA       V +AL+ MY K
Sbjct: 380 VEMKRDGESSNRSTFSCALSTC-ADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFK 438

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G+ + A++VF+   ++D+VSWN+MI GYA+HG  ++AL +F+ M++  ++ D IT +GV
Sbjct: 439 CGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGV 498

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           ++AC+H+GL+D G +YF  M  ++++ PT +HY+CM+DL  RAG LE+A +++  MPF  
Sbjct: 499 LSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDP 558

Query: 648 SATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
            A  W  +L A R+                ++P +S +YVLLSN+YAA+G W +  ++R 
Sbjct: 559 GAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRS 618

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
            M +  V+K  GYSW+EV+NK ++F  GD  HP+ ++IY+ LEEL  +++  GY   T  
Sbjct: 619 KMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKL 678

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
           VL D+++E KE +L  HSE+LA+AFG++  PAG P++++KNLRVC DCH  IK ISK+  
Sbjct: 679 VLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVG 738

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
           R I++RD++RFHHF EG+CSCGDYW
Sbjct: 739 RLIILRDSHRFHHFSEGICSCGDYW 763



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/562 (27%), Positives = 269/562 (47%), Gaps = 55/562 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRL---GLPLFGSTLSSVLKTC 88
           +F+  P+R+ V YN ++  Y R++    A +LF  +  R L    + L G   +  L   
Sbjct: 68  VFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEA 127

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             LFD +               +DV    +++  Y +   V++ R VF+ M   N +SW 
Sbjct: 128 HKLFDLMP-------------KKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWN 174

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIK 207
            LL+ Y  N        LF       +     +++ ++G      ++  A Q+   M ++
Sbjct: 175 GLLAAYVHNGRLKEARRLFESQSNWEL----ISWNCLMGGYVKRNMLGDARQLFDRMPVR 230

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              +V++   N +IS Y +   +  A+ +F+    RD  TW +MV+GYV N +  EA + 
Sbjct: 231 ---DVIS--WNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKY 285

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M +        ++ +++      K++ +A +L   +    I   + + TG    Y +
Sbjct: 286 FDEMPVK----NEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITG----YGQ 337

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G +  A K+F MM + +D VSW A+ISG+ QNG  + A+N F +M R+G   N  T+S 
Sbjct: 338 NGGIAQARKLFDMMPQ-RDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSC 396

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            L+    ++      QVH  ++K  +E    VG ALL  Y K G  DEA  VFE I+EKD
Sbjct: 397 ALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKD 456

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+ M+AGYA+ G    A+ ++  +   GVKP+E T   V++AC+  S  +++G ++ 
Sbjct: 457 VVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSH-SGLIDRGTEYF 515

Query: 504 AC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYA 557
                  ++K    +  C    ++ +  + G +E A  + +         SW +++    
Sbjct: 516 YSMDRDYNVKPTSKHYTC----MIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASR 571

Query: 558 QHGHT---KKALEVFKEMRRQD 576
            HG+T   +KA E+  +M  Q+
Sbjct: 572 IHGNTELGEKAAEMVFKMEPQN 593



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 199/466 (42%), Gaps = 83/466 (17%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLP-----LFGSTLSSVLK 86
           + +F++ P RN + +N LL  Y  +   +EA  LF       L      + G    ++L 
Sbjct: 159 REVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLG 218

Query: 87  TCGCLFDHVFGRQV-HCECVKSGFA-----------------RDVNVSTSLVDLYMRTNN 128
               LFD +  R V     + SG+A                 RDV   T++V  Y++   
Sbjct: 219 DARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGM 278

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           V++ R+ FD+M   N +S+ ++L+GY + K      ELF  M    I             
Sbjct: 279 VDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNI------------- 325

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
                                     S  N +I+ Y ++  +  AR +FD M  RD ++W
Sbjct: 326 --------------------------SSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSW 359

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
            ++++GY  N  + EA   F  M   G    RSTF   +  CA    L L +Q+H QV+K
Sbjct: 360 AAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVK 419

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
            G +    +   L+  Y KCG  ++A+ +F  + E KDVVSW  MI+G+ ++G    A+ 
Sbjct: 420 AGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEE-KDVVSWNTMIAGYARHGFGRQALV 478

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG------------ 416
            F  M + GV+P+  T   +L+A         H+ +I    E  +S+             
Sbjct: 479 LFESMKKAGVKPDEITMVGVLSACS-------HSGLIDRGTEYFYSMDRDYNVKPTSKHY 531

Query: 417 TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
           T +++   + G L+EA  +   +  +    +W A+L      G+TE
Sbjct: 532 TCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTE 577


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/746 (35%), Positives = 424/746 (56%), Gaps = 33/746 (4%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y   ++  D +  FD + + N+ SWT L++ +A +  +   L    RM+ +G++P++ T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F T LG   D   +   +++H MV+ +  E+   V NAL++MY K   +  A+ VF  ME
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 242 -DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             R+ I+W+ M   +  +    EA   F  M L G + T+S  V+++  C++   ++  R
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE-MKDVVSWTAMISGHLQ 359
            +HS +  +G + +  +   +M  Y +CG +E+A K+F  M E ++DVVSW  M+S ++ 
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSV 415
           N     A+  + +M    +RP+  TY  +L+A  +     +    H  I+    EK+  V
Sbjct: 241 NDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL----- 470
           G AL++ Y K G   EA  VF+ ++++ I++W+ +++ Y +      A  +++Q+     
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 357

Query: 471 --TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
             +S+ VKP+   F +++NAC A  +A+EQGK     +    L++   V +A+V +Y K 
Sbjct: 358 NGSSQRVKPDALAFVTILNAC-ADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 416

Query: 529 GNIESASEVFKRQRKR-DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
           G IE A  +F     R D+  WN+MI  YAQ G + +AL++F  M  + +  D  +F+ +
Sbjct: 417 GEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSI 476

Query: 588 ITACTHAGLVDEGQQYFDIMVNEH-HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           + AC+H GL D+G+ YF  M  E+ ++  T++H+ C+ DL  R G L++A + + ++P  
Sbjct: 477 LLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVK 536

Query: 647 ASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
             A  W ++LAACR              L+ L+P  +  YV LSN+YA    W   A+VR
Sbjct: 537 PDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVR 596

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           K M ++ VKKE G S IE+    + F  GD +HP++ +I  +L +L +++K+ GY PDT 
Sbjct: 597 KFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTK 656

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
            VL  +D++ KE +L  HSERLAIA GL++TP G PL++ KNLRVC DCHT  KLISK+ 
Sbjct: 657 MVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIA 716

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R IVVRD  RFH FK+G CSC DYW
Sbjct: 717 GRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 155/566 (27%), Positives = 281/566 (49%), Gaps = 33/566 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++ FD   QRN   +  L+  +      +E L     +R+ G+     T  + L +CG  
Sbjct: 12  KAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDP 71

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVVSWTSL 150
                G ++H   V S    D  VS +L+++Y +  ++   +RVF  M  + NV+SW+ +
Sbjct: 72  ESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIM 131

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
              +A +      L  F  M + GIK       T+L   +   +V     +H+ +  +G 
Sbjct: 132 AGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGF 191

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVAGYVTNELHMEAFETF 268
           E    V NA+++MY +   V +AR VFD M++  RD ++WN M++ YV N+   +A + +
Sbjct: 192 ESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLY 251

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M L      + T+VS++  C++ +++ L R LH Q++ + ++ +  +   L+  Y+KC
Sbjct: 252 QRMQL---RPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKC 308

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-------TREGVRPN 381
           G   +A  +F  M E + ++SWT +IS +++   +  A + F QM       + + V+P+
Sbjct: 309 GSHTEARAVFDKM-EQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPD 367

Query: 382 GFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
              +  IL A   VS  +    V             +VGTA++N Y K G ++EA ++F+
Sbjct: 368 ALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFD 427

Query: 438 LI-DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            +    D+  W+AM+A YAQ G +  A+K++ ++  EGV+P+ F+F S++ AC+  +   
Sbjct: 428 AVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACS-HTGLE 486

Query: 497 EQGKQFHACSIKAKLNNAL-------CVSSALVTMYSKKGNIESASEVFKR-QRKRDLVS 548
           +QGK +   S+  +  N         CV+  L     + G ++ A E  ++   K D V+
Sbjct: 487 DQGKSYFT-SMTTEYRNVTRTIQHFGCVADLL----GRGGRLKEAEEFLEKLPVKPDAVA 541

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRR 574
           W S++     H   K+A EV  ++ R
Sbjct: 542 WTSLLAACRNHRDLKRAKEVANKLLR 567


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 261/746 (34%), Positives = 426/746 (57%), Gaps = 55/746 (7%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD     ++V  Y     + + R +F+  +  + ++W+SL+SGY R        +LF RM
Sbjct: 144 RDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRM 203

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           ++EG KP+ +T  ++L   +  G++     +H  V+KNG E    V   L+ MY K + +
Sbjct: 204 RLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHI 263

Query: 231 RDARAVFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            +A  +F G+     + + W +MV GY  N    +A E F  M   G E  + TF S++ 
Sbjct: 264 SEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILT 323

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C++        Q+H  +++NG   +  +++ L+  Y+KCG +  A ++   M E  DVV
Sbjct: 324 ACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENM-EDDDVV 382

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA--VSPFQVHAHIIK 406
           SW +MI G +++G  + A+  F +M    ++ + +T+  +L       +    VH  +IK
Sbjct: 383 SWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKSVHCLVIK 442

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           T +E    V  AL++ Y K   L+ A  VFE + EKD+++W++++ GY Q G  E ++K 
Sbjct: 443 TGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKT 502

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           +  +   GV P++F  +S+++AC A    +E GKQ H+  IK  L ++L V+++LVTMY+
Sbjct: 503 FCDMRISGVSPDQFIVASILSAC-AELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYA 561

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G ++ A  +F     RD+++W ++I GYA++G  + +L+ F++M++            
Sbjct: 562 KCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKI----------- 610

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
                                   + I P  EHY+CM+DL+ R G L++A +I+N+M   
Sbjct: 611 ------------------------YGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVK 646

Query: 647 ASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
             ATVW+ +LAACR              L  L+P ++  YV+LSNMY A   W + A++R
Sbjct: 647 PDATVWKALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIR 706

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           +LM  + + KE G SWIE+ ++ ++F++ D  HP+  +IYSK++E+  R+K+ GY PD +
Sbjct: 707 RLMKSKGITKEPGCSWIEMNSRLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMN 766

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
           + L D+D E KEA L+ HSE+LA+AFGL+A+P GAP++I KNLRVCGDCH+ +K IS + 
Sbjct: 767 FSLHDMDREGKEAGLAYHSEKLAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVF 826

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R I++RD+N FHHFKEG CSC DYW
Sbjct: 827 TRHIILRDSNCFHHFKEGECSCEDYW 852



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 253/521 (48%), Gaps = 47/521 (9%)

Query: 49  LLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSG 108
           L+  YCR     EA +LF  +R  G      TL S+L+ C  L     G  +H   VK+G
Sbjct: 183 LISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNG 242

Query: 109 FARDVNVSTSLVDLYMRTNNVEDGRRVFDDM--NESNVVSWTSLLSGYARNKMNDRVLEL 166
           F  +V V   LVD+Y +  ++ +   +F  +  N+ N V WT++++GYA+N  + + +E 
Sbjct: 243 FESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEF 302

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           F  M  EG++ N FTF ++L   +         QVH  +++NG      V +AL+ MY K
Sbjct: 303 FRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAK 362

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              +  A+ V + MED D ++WNSM+ G V +    EA   F  M     ++   TF SV
Sbjct: 363 CGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSV 422

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           +  C   +     + +H  V+K G +    +   L+  Y+K   +  A  +F  M E KD
Sbjct: 423 LNCCIVGR--IDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFE-KD 479

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHA 402
           V+SWT++++G+ QNG+ + ++  FC M   GV P+ F  + IL+A   ++      QVH+
Sbjct: 480 VISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHS 539

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
             IK     S SV  +L+  Y K G LD+A  +F  +  +D++ W+A++ GYA+ G    
Sbjct: 540 DFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRD 599

Query: 463 AVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
           ++K ++Q+    G++P                     G + +AC               +
Sbjct: 600 SLKYFQQMKKIYGIEP---------------------GPEHYAC---------------M 623

Query: 522 VTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
           + ++ + G ++ A E+  +   K D   W +++     HG+
Sbjct: 624 IDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGN 664



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 153/511 (29%), Positives = 257/511 (50%), Gaps = 50/511 (9%)

Query: 177 PNSFTFSTVLGVLA------DEGIVATAVQVHTMVIKNGGEVVTSV--CNALISMYLKSK 228
           P  +  ST L VL       +E    T VQ   +V+ N  +   S+   N L++   KS 
Sbjct: 72  PLGYYISTALSVLLSASPSLNEDSDDTGVQ--QVVMHNIADSYQSIFHSNQLLNGLSKSG 129

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVT-------NEL--------------------- 260
            + DAR +FD M  RD  TWN+MV+GY          EL                     
Sbjct: 130 QIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCR 189

Query: 261 ---HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                EAF+ F  M L G + ++ T  S+++ C+    ++    +H  V+KNG + +  +
Sbjct: 190 FGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYV 249

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMK-DVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
             GL+  Y+KC  + +A  +F  +   K + V WTAM++G+ QNG    A+ FF  M  E
Sbjct: 250 VAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTE 309

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           GV  N FT+  ILTA  +VS      QVH  I++  +  +  V +AL++ Y K G L  A
Sbjct: 310 GVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSA 369

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            +V E +++ D+V+W++M+ G  + G  E A+ +++++ +  +K + +TF SV+N C   
Sbjct: 370 KRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVG 429

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
                 GK  H   IK    N   VS+ALV MY+K  ++  A  VF++  ++D++SW S+
Sbjct: 430 RI---DGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSL 486

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           + GY Q+G  +++L+ F +MR   +  D      +++AC    L++ G+Q     + +  
Sbjct: 487 VTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFI-KLG 545

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  ++   + +V +Y++ G L+ A  I   M
Sbjct: 546 LRSSLSVNNSLVTMYAKCGCLDDADAIFVSM 576



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 42/334 (12%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +N ++    R    +EA+ LF  +    + +   T  SVL  C  +   + G+ VH
Sbjct: 380 DVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCC--IVGRIDGKSVH 437

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
           C  +K+GF     VS +LVD+Y +T ++     VF+ M E +V+SWTSL++GY +N  ++
Sbjct: 438 CLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHE 497

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
             L+ F  M++ G+ P+ F  +++L   A+  ++    QVH+  IK G     SV N+L+
Sbjct: 498 ESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLV 557

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTR 280
           +MY K   + DA A+F  M  RD ITW +++ GY  N    ++ + F  M  + G E   
Sbjct: 558 TMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEPGP 617

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
             +  +I L                                   + + GK+++A +I + 
Sbjct: 618 EHYACMIDL-----------------------------------FGRLGKLDEAKEILNQ 642

Query: 341 MREMKDVVSWTAMISGHLQNGAIDL----AVNFF 370
           M    D   W A+++    +G ++L    A N F
Sbjct: 643 MDVKPDATVWKALLAACRVHGNLELGERAATNLF 676


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 283/827 (34%), Positives = 467/827 (56%), Gaps = 41/827 (4%)

Query: 49  LLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSG 108
           LL    R +L +EA+  ++ +  LG+        ++LK    L D   G+Q+H    K G
Sbjct: 64  LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123

Query: 109 FARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELF 167
           +  D V V+ +LV+LY +  +     +VFD ++E N VSW SL+S     +  +  LE F
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183

Query: 168 HRMQVEGIKPNSFTFSTVLGVLAD----EGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
             M  E ++P+SFT  +V    ++    EG++    QVH   ++ G E+ + + N L++M
Sbjct: 184 RCMLDEDVEPSSFTLVSVALACSNFPMPEGLL-MGKQVHAYGLRKG-ELNSFIINTLVAM 241

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K   +  ++ +    E RD +TWN++++    NE  +EA E    M L G E    T 
Sbjct: 242 YGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTI 301

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
            SV+  C+  + LR  ++LH+  LKNG +D +  + + L+  Y  C ++    ++F  M 
Sbjct: 302 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMF 361

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPFQ-- 399
           + K +  W AMI+G+ QN   + A+  F +M    G+  N  T + ++ A      F   
Sbjct: 362 DRK-IGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKK 420

Query: 400 --VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
             +H  ++K   ++   V  AL++ Y + G +D A ++F  ++++D+V W+ ++ GY   
Sbjct: 421 EAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFS 480

Query: 458 GDTEGAV------KIYRQLTSE-----GVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
              E A+      +I  +  SE      +KPN  T  +++ +C A SA + +GK+ HA +
Sbjct: 481 ERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSA-LAKGKEIHAYA 539

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           IK  L   + V SALV MY+K G ++ + +VF +   R++++WN ++  Y  HG+++ A+
Sbjct: 540 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAI 599

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++ + M  Q ++ + +TFI V  AC+H+G+V+EG + F  M  ++ + P+ +HY+C+VDL
Sbjct: 600 DMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDL 659

Query: 627 YSRAGMLEKAMDIINRMPFA-ASATVWRTVLAACR--------------LISLQPHDSAI 671
             RAG +++A  +IN +P     A  W ++L ACR              LI L+P+ ++ 
Sbjct: 660 LGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASH 719

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLL+N+Y++ G W +   VR+ M  + V+KE G SWIE  ++ + F+AGD SHPQS ++
Sbjct: 720 YVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 779

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
              LE L  R++  GY PDTS VL +++++ KE +L  HSE+LAIAFG++ T  G  +++
Sbjct: 780 RGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 839

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVC DCH   K ISK+  R+I++RD  RFHHFK G CSCGDYW
Sbjct: 840 AKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 266/537 (49%), Gaps = 34/537 (6%)

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  LL    R+ +    +  +  M V GIKP++F F  +L  +AD   +    Q+H  V 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 207 KNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           K G G    +V N L+++Y K         VFD + +R+ ++WNS+++   + E    A 
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCAT---TKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           E F  M     E +  T VSV   C+     + L + +Q+H+  L+ G + +  I   L+
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLV 239

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y K GK+  +SK+     E +D+V+W  ++S   QN     A+ +  +M  EGV P+G
Sbjct: 240 AMYGKMGKLA-SSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDG 298

Query: 383 FTYSIILTAQPAVSPF-------QVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAA 433
           FT S +L   PA S         ++HA+ +K     E SF VG+AL++ Y     +    
Sbjct: 299 FTISSVL---PACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGC 354

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL-TSEGVKPNEFTFSSVINACTAP 492
           +VF+ + ++ I  W+AM+ GYAQ    E A+ ++ ++  S G+  N  T + V+ AC   
Sbjct: 355 RVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVR- 413

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           S A  + +  H   +K  L+    V +AL+ MYS+ G I+ A  +F +   RDLV+WN++
Sbjct: 414 SGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTI 473

Query: 553 ICGYAQHGHTKKALEVFKEMR-----------RQDLEFDGITFIGVITACTHAGLVDEGQ 601
           I GY      + AL +  +M+           R  L+ + IT + ++ +C     + +G+
Sbjct: 474 ITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGK 533

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +     + ++++   +   S +VD+Y++ G L+ +  + +++P     T W  ++ A
Sbjct: 534 EIHAYAI-KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVIT-WNVIVMA 588



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 222/452 (49%), Gaps = 35/452 (7%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQV 100
           R+ V +N +L   C++    EAL     +   G+   G T+SSVL  C  L     G+++
Sbjct: 261 RDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKEL 320

Query: 101 HCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           H   +K+G + D N  V ++LVD+Y     V  G RVFD M +  +  W ++++GYA+N+
Sbjct: 321 HAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNE 379

Query: 159 MNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
            ++  L LF  M +  G+  NS T + V+      G  +    +H  V+K G +    V 
Sbjct: 380 YDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQ 439

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL---- 273
           NAL+ MY +   +  A+ +F  MEDRD +TWN+++ GYV +E H +A    + M +    
Sbjct: 440 NALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERK 499

Query: 274 AGAELTRS-------TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           A    +R        T ++++  CA    L   +++H+  +KN +  D  + + L+  Y+
Sbjct: 500 ASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 559

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG ++ + K+F  +  +++V++W  ++  +  +G    A++    M  +GV+PN  T+ 
Sbjct: 560 KCGCLQMSRKVFDQI-PIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTF- 617

Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------LLNAYVKKGILDEAAKVFELID 440
           I + A  + S        I  N +K + V  +      +++   + G + EA ++  LI 
Sbjct: 618 ISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIP 677

Query: 441 EK--DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
                  AWS++L          GA +I+  L
Sbjct: 678 RNFDKAGAWSSLL----------GACRIHNNL 699



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 24/221 (10%)

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           P  FT+S+   +QP     Q H ++++                     + D+ A      
Sbjct: 4   PLAFTFSLPFPSQPLPFSRQKHPYLLRAT----------------PTSVTDDVASTVYGA 47

Query: 440 DEKDIVA------WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
             K I        W  +L    +      AV  Y  +   G+KP+ F F +++ A  A  
Sbjct: 48  PSKFISQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKA-VADL 106

Query: 494 AAVEQGKQFHACSIKAKLN-NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
             ++ GKQ HA   K     +++ V++ LV +Y K G+  +  +VF R  +R+ VSWNS+
Sbjct: 107 QDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 166

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           I         + ALE F+ M  +D+E    T + V  AC++
Sbjct: 167 ISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSN 207


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/737 (35%), Positives = 433/737 (58%), Gaps = 44/737 (5%)

Query: 120 VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
           +  +MR  + +    VF+ M   + VS+ +++SGY RN   +    LF +M    +    
Sbjct: 56  ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDL---- 111

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           F+++ +L        +  A ++  ++ +   +VV+   N+L+S Y ++  V +AR VFD 
Sbjct: 112 FSWNVMLTGYVRNCRLGDARRLFDLMPEK--DVVS--WNSLLSGYAQNGYVDEAREVFDN 167

Query: 240 MEDRDSITWNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           M +++SI+WN ++A YV N    EA   FE+ ++  L         FV         K+L
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVR-------KKKL 220

Query: 297 RLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             AR L  ++ +++ I ++      ++  Y++ G +  A ++F      +DV +WTAM+S
Sbjct: 221 GDARWLFDKMPVRDAISWNT-----MISGYAQGGGLSQARRLFDE-SPTRDVFTWTAMVS 274

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV 415
           G++QNG +D A  FF +M  +    N  +Y+ ++          +   + ++   ++ S 
Sbjct: 275 GYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCRNISS 330

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
              ++  Y + G + +A K F+++ ++D V+W+A++AGYAQ G  E A+ ++ ++  +G 
Sbjct: 331 WNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGE 390

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
             N  TF   ++ C A  AA+E GKQ H  ++K        V +AL+ MY K G+I+ A+
Sbjct: 391 SLNRATFGCALSTC-ADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAN 449

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           + F+   ++D+VSWN+M+ GYA+HG  ++AL VF+ M+   ++ D IT +GV++AC+H G
Sbjct: 450 DTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
           L+D G +YF  M  ++ + PT +HY+CM+DL  RAG LE+A D+I  MPF   A  W  +
Sbjct: 510 LLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGAL 569

Query: 656 LAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
           L A R+                ++P +S +YVLLSN+YAA+G W +  ++R  M D  V+
Sbjct: 570 LGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQ 629

Query: 702 KEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE 761
           K  GYSW+EV+NK ++F  GD SHP+  +IY+ LEEL  ++++ GY   T  VL D+++E
Sbjct: 630 KVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEE 689

Query: 762 HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
            KE +L  HSE+LA+AFG++  P G P++++KNLRVC DCH+ IK ISK+  R I++RD+
Sbjct: 690 EKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDS 749

Query: 822 NRFHHFKEGLCSCGDYW 838
           +RFHHF EG CSCGDYW
Sbjct: 750 HRFHHFNEGFCSCGDYW 766



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 152/557 (27%), Positives = 263/557 (47%), Gaps = 45/557 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC--- 90
           +F+  P+R+ V YN ++  Y R+S    A NLF  +    L  +   L+  ++ C     
Sbjct: 71  VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDA 130

Query: 91  --LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             LFD +               +DV    SL+  Y +   V++ R VFD+M E N +SW 
Sbjct: 131 RRLFDLMP-------------EKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWN 177

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIK 207
            LL+ Y  N   +    LF          +  +++ ++G    +  +  A  +   M ++
Sbjct: 178 GLLAAYVHNGRIEEACLLFESKS----DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR 233

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +         N +IS Y +   +  AR +FD    RD  TW +MV+GYV N +  EA   
Sbjct: 234 D-----AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTF 288

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M     E    ++ ++I     TK++ +AR+L   +    I   + + TG    Y +
Sbjct: 289 FDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITG----YGQ 340

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G +  A K F MM + +D VSW A+I+G+ Q+G  + A+N F ++ ++G   N  T+  
Sbjct: 341 IGDIAQARKFFDMMPQ-RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGC 399

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            L+    ++      Q+H   +K  Y     VG ALL  Y K G +DEA   FE I+EKD
Sbjct: 400 ALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+ MLAGYA+ G    A+ ++  + + GVKP+E T   V++AC+         + F+
Sbjct: 460 VVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFY 519

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
           + +    +       + ++ +  + G +E A ++ +    +    SW +++     HG+T
Sbjct: 520 SMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNT 579

Query: 563 ---KKALEVFKEMRRQD 576
              +KA E+  +M  Q+
Sbjct: 580 ELGEKAAEMVFKMEPQN 596



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 49/454 (10%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y  + + +FD  P++N + +N LL  Y  +   +EA  LF       L  +   +   ++
Sbjct: 157 YVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVR 216

Query: 87  T-----CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
                    LFD +               RD     +++  Y +   +   RR+FD+   
Sbjct: 217 KKKLGDARWLFDKM-------------PVRDAISWNTMISGYAQGGGLSQARRLFDESPT 263

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            +V +WT+++SGY +N M D     F  M     + N  +++ ++        +  A ++
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIAREL 319

Query: 202 -HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
             +M  +N      S  N +I+ Y +   +  AR  FD M  RD ++W +++AGY  +  
Sbjct: 320 FESMPCRN-----ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGH 374

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           + EA   F  +   G  L R+TF   +  CA    L L +Q+H Q +K G      +   
Sbjct: 375 YEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNA 434

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y KCG +++A+  F  + E KDVVSW  M++G+ ++G    A+  F  M   GV+P
Sbjct: 435 LLAMYFKCGSIDEANDTFEGIEE-KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKP 493

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGI 428
           +  T   +L+A         H  ++    E  +S+             T +++   + G 
Sbjct: 494 DEITMVGVLSACS-------HTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGR 546

Query: 429 LDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
           L+EA  +   +  +    +W A+L      G+TE
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTE 580



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 174/354 (49%), Gaps = 36/354 (10%)

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
           D++ W   IS H++NG  D A++ F  M R     +  +Y+ +++     S F +  ++ 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNLARNLF 103

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
               E+       +L  YV+   L +A ++F+L+ EKD+V+W+++L+GYAQ G  + A +
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEARE 163

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI-KAKLNNALCVSSALVTM 524
           ++  +  +    N  +++ ++      +A V  G+   AC + ++K +  L   + L+  
Sbjct: 164 VFDNMPEK----NSISWNGLL------AAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           + +K  +  A  +F +   RD +SWN+MI GYAQ G   +A  +F E   +D+     T+
Sbjct: 214 FVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDV----FTW 269

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             +++     G++DE + +FD M  ++ +      Y+ M+  Y +   ++ A ++   MP
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAMIAGYVQTKKMDIARELFESMP 324

Query: 645 FAASATVWRTVLA----------ACRLISLQPH-DSAIYVLLSNMYAATGHWQE 687
              + + W T++           A +   + P  D   +  +   YA +GH++E
Sbjct: 325 -CRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEE 377



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/467 (22%), Positives = 203/467 (43%), Gaps = 76/467 (16%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N  IS ++++     A  VF+ M  R S+++N+M++GY+ N                   
Sbjct: 53  NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN------------------- 93

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                            +  LAR L  Q+ +  + F  N+   ++  Y +  ++ DA ++
Sbjct: 94  ----------------SKFNLARNLFDQMPERDL-FSWNV---MLTGYVRNCRLGDARRL 133

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F +M E KDVVSW +++SG+ QNG +D A   F  M  +    N  +++ +L A      
Sbjct: 134 FDLMPE-KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGR 188

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            +    + ++  +        L+  +V+K  L +A  +F+ +  +D ++W+ M++GYAQ 
Sbjct: 189 IEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQG 248

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN-NALC 516
           G    A    R+L  E    + FT++++++         E    F     K +++ NA+ 
Sbjct: 249 GGLSQA----RRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMI 304

Query: 517 VS-------------------------SALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
                                      + ++T Y + G+I  A + F    +RD VSW +
Sbjct: 305 AGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAA 364

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +I GYAQ GH ++AL +F E+++     +  TF   ++ C     ++ G+Q     V   
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMG 424

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +        + ++ +Y + G +++A D    +        W T+LA 
Sbjct: 425 YGTGCFVG-NALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTMLAG 469


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/704 (38%), Positives = 401/704 (56%), Gaps = 84/704 (11%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+L+S+Y KS  + DARAVF  M +RD ++W  MV G        EA + F +M   G  
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T+ T  +V+  CA T+   + R++HS V+K G+     +   ++  Y KCG  E A  +
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219

Query: 338 FSMMRE----------------------------MKD--VVSWTAMISGHLQNGAIDLAV 367
           F  M E                            M D  +VSW A+I+G+ QNG    A+
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKAL 279

Query: 368 NFFCQM-TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN-------------- 408
            FF +M +   + P+ FT + +L+A   +       QVHA+I+++               
Sbjct: 280 WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISM 339

Query: 409 YEKSFSVG-------------------TALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           Y KS SV                    TALL  YVK G +  A ++F+++  +D+VAW+A
Sbjct: 340 YAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTA 399

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GY Q G  + A++++R +   G +PN +T ++V++ C A  A +E GKQ H  +I++
Sbjct: 400 MIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVC-ASLACLEYGKQIHCKAIRS 458

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEV 568
               +  VS+++VTMY++ G++  A  VF R   +++ V+W SMI   AQHG  + A+ +
Sbjct: 459 LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGL 518

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM R  ++ D ITF+GV++ACTH G VDEG++YF  + ++H I P M HY+CMVDL +
Sbjct: 519 FEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLA 578

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG+  +A + I +MP    A  W ++L+ACR              L+S+ P +S  Y  
Sbjct: 579 RAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSA 638

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+Y+A G W + A++ K   D+ VKKE G+SW  + N+ + F A D+ HPQ + +Y  
Sbjct: 639 LSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRT 698

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
             ++   +K AG+ PD   VL D+DDE KE +LS+HSE+LAIAFGLV+TP    L+I+KN
Sbjct: 699 AAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKN 758

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCHT IK ISK+  R+I++RD  RFHHFK+G CSC DYW
Sbjct: 759 LRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 237/522 (45%), Gaps = 76/522 (14%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V    SL+ LY ++  + D R VF +M E + VSWT ++ G  R       +++F  M
Sbjct: 94  RNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             +G+ P  FT + VL   A         +VH+ V+K G      V N++++MY K    
Sbjct: 154 VTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDA 213

Query: 231 RDARAVFD-------------------------------GMEDRDSITWNSMVAGYVTNE 259
             ARAVF+                                M DR  ++WN+++AGY  N 
Sbjct: 214 ETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273

Query: 260 LHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           L+ +A   F+ M     +A  E    T  SV+  CA    + + +Q+H+ +L++ + +  
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEF---TITSVLSACANLGMVSIGKQVHAYILRSRMPYIG 330

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSM--------------------------MREM----- 344
            +   L+  Y+K G +E+A  +                              REM     
Sbjct: 331 QVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMS 390

Query: 345 -KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
            +DVV+WTAMI G+ QNG  D A+  F  M R G  PN +T + +L+   +++      Q
Sbjct: 391 NRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQ 450

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIG 458
           +H   I++  E+S SV  +++  Y + G L  A +VF+ +   K+ V W++M+   AQ G
Sbjct: 451 IHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG 510

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             E AV ++ ++   GVKP+  TF  V++ACT      E  + F     K  +   +   
Sbjct: 511 LGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHY 570

Query: 519 SALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
           + +V + ++ G    A E  ++   + D ++W S++     H
Sbjct: 571 ACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVH 612



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 146/586 (24%), Positives = 262/586 (44%), Gaps = 108/586 (18%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F   P+R+ V +  ++    R     EA+ +FL +   GL     TL++VL +C   
Sbjct: 116 RAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAAT 175

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV------- 144
                GR+VH   VK G +  V V+ S++++Y +  + E  R VF+ M E +V       
Sbjct: 176 EARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMV 235

Query: 145 ------------------------VSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNS 179
                                   VSW ++++GY +N +N + L  F RM     + P+ 
Sbjct: 236 SLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDE 295

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV--- 236
           FT ++VL   A+ G+V+   QVH  ++++    +  V NALISMY KS  V +AR V   
Sbjct: 296 FTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQ 355

Query: 237 ------------------------------FDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
                                         FD M +RD + W +M+ GY  N  + EA E
Sbjct: 356 AVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAME 415

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M  +G E    T  +V+ +CA+   L   +Q+H + +++  +   ++   ++  Y+
Sbjct: 416 LFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYA 475

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           + G +  A ++F  +   K+ V+WT+MI    Q+G  + AV  F +M R GV+P+  T+ 
Sbjct: 476 RSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFV 535

Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK---- 442
            +L+A   V                               G +DE  + F+ + +K    
Sbjct: 536 GVLSACTHV-------------------------------GFVDEGKRYFQQLQDKHGIV 564

Query: 443 -DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA-PSAAVEQGK 500
            ++  ++ M+   A+ G    A +  +Q+    V+P+   + S+++AC    +A + +  
Sbjct: 565 PEMSHYACMVDLLARAGLFSEAQEFIQQMP---VEPDAIAWGSLLSACRVHKNADLAELA 621

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
                SI    + A    SAL  +YS  G    A++++KR++ + +
Sbjct: 622 AEKLLSIDPGNSGAY---SALSNVYSACGRWNDAAKIWKRRKDKSV 664



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 146/337 (43%), Gaps = 44/337 (13%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FD    R+ V +  ++  Y ++  + EA+ LF  + R G      T+++VL  C
Sbjct: 380 KHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVC 439

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSW 147
             L    +G+Q+HC+ ++S   +  +VS S+V +Y R+ ++   RRVFD ++     V+W
Sbjct: 440 ASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTW 499

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           TS++   A++ + +  + LF  M   G+KP+  TF  VL      G V    +    +  
Sbjct: 500 TSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQD 559

Query: 208 NGG---EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHME 263
             G   E+    C  ++ +  ++ +  +A+     M  + D+I W S+++          
Sbjct: 560 KHGIVPEMSHYAC--MVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSA--------- 608

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
                                     C   K   LA +L ++ L +    +    + L  
Sbjct: 609 --------------------------CRVHKNADLA-ELAAEKLLSIDPGNSGAYSALSN 641

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            YS CG+  DA+KI+   R+ K V   T     H+ N
Sbjct: 642 VYSACGRWNDAAKIWK-RRKDKSVKKETGFSWTHIGN 677


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/737 (36%), Positives = 414/737 (56%), Gaps = 68/737 (9%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            S +  Y R   +E  RRVFD+M +  +VSW S+++GY +N        LF +M      
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM------ 73

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P   T S                                  N LIS Y+K++MV +AR  
Sbjct: 74  PERNTVS---------------------------------WNGLISGYVKNRMVSEARKA 100

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD M +R+ ++W +MV GYV   L  EA   F  M     E    ++  ++      + +
Sbjct: 101 FDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM----PEKNVVSWTVMLGGLIQVRRI 156

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
             AR L   +       D   RT ++  Y + G++ +A ++F  M   ++V+SWT MISG
Sbjct: 157 DEARGLFDIMPVK----DVVARTNMISGYCQEGRLAEARELFDEMPR-RNVISWTTMISG 211

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG 416
           ++QNG +D+A   F  M  +    N  +++ +L         +  + +      K+    
Sbjct: 212 YVQNGQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVAC 267

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
            A++  + + G + +A +VF+ I EKD   WSAM+  Y + G    A+ ++  +  EGV+
Sbjct: 268 NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQ 327

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
            N  +  SV++ C A  A+++ G+Q HA  +K++ ++ + V+S L+TMY K G++  A +
Sbjct: 328 SNFPSLISVLSVC-ASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQ 386

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F R   +D+V WNS+I GYAQHG  ++AL+VF EM    +  DG+TF+GV++AC++ G 
Sbjct: 387 IFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGK 446

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V EG + F+ M +++ + P  EHY+CMVDL  RAG++  AMD+I +MP  A A +W  +L
Sbjct: 447 VKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506

Query: 657 AACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            ACR              L+ L+P ++  Y+LLSN+YA+ G W + A +R+ M  +KV K
Sbjct: 507 GACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSK 566

Query: 703 EAGYSWIEVKNKTYSFLAG-DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE 761
             G SWIEV+ + + F  G    HP+ + I   LE+L   L++AGY PD+S+VL D+D+E
Sbjct: 567 SPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEE 626

Query: 762 HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
            K   L  HSERLA+AFGL+  P G P++++KNLRVCGDCH+ IKLI+K+  R+I++RD 
Sbjct: 627 EKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDA 686

Query: 822 NRFHHFKEGLCSCGDYW 838
           NRFHHFK+G CSC DYW
Sbjct: 687 NRFHHFKDGFCSCRDYW 703



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 214/458 (46%), Gaps = 38/458 (8%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT-----CG 89
           FD  P+RN V +  ++  Y ++ L  EA  LF  +    +  +   L  +++        
Sbjct: 101 FDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEAR 160

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            LFD +               +DV   T+++  Y +   + + R +FD+M   NV+SWT+
Sbjct: 161 GLFDIM-------------PVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTT 207

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKN 208
           ++SGY +N   D   +LF  M     + N  +++ +L      G +  A ++   M +K 
Sbjct: 208 MISGYVQNGQVDVARKLFEVMP----EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVK- 262

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                   CNA+I  + ++  V  AR VFD + ++D  TW++M+  Y      +EA   F
Sbjct: 263 ----AVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLF 318

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G +    + +SV+ +CA+   L   RQ+H++++K+  D D  + + L+  Y KC
Sbjct: 319 ALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKC 378

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  A +IF      KD+V W ++I+G+ Q+G ++ A+  F +M   G+  +G T+  +
Sbjct: 379 GDLVKARQIFDRFSP-KDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGV 437

Query: 389 LTAQPAVSPFQVHAHI---IKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID-EK 442
           L+A       +    I   +K+ Y  E        +++   + G++++A  + + +  E 
Sbjct: 438 LSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEA 497

Query: 443 DIVAWSAMLAG---YAQIGDTEGAVKIYRQLTSEGVKP 477
           D + W A+L     +  +   E A K   QL  +   P
Sbjct: 498 DAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGP 535



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 154/359 (42%), Gaps = 24/359 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-----LGLPLFGSTLSSVLK 86
           + LFD  P+RN + +  ++  Y ++     A  LF  +           L G T    ++
Sbjct: 191 RELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIE 250

Query: 87  TCGCLFDHVFGRQV-HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
               LFD +  + V  C  +  GF ++  V+ +              R+VFD + E +  
Sbjct: 251 EASELFDAMPVKAVVACNAMILGFGQNGEVAKA--------------RQVFDQIREKDDG 296

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +W++++  Y R       L LF  MQ EG++ N  +  +VL V A    +    QVH  +
Sbjct: 297 TWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAEL 356

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K+  +    V + LI+MY+K   +  AR +FD    +D + WNS++ GY  + L  EA 
Sbjct: 357 VKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEAL 416

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-A 324
           + F+ M  +G      TFV V+  C+ T +++   ++   +    +          MV  
Sbjct: 417 QVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDL 476

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISG---HLQNGAIDLAVNFFCQMTREGVRP 380
             + G + DA  +   M    D + W A++     H+     ++A     Q+  +   P
Sbjct: 477 LGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGP 535



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + +FD+  +++   ++ ++  Y R     EALNLF  ++R G+     +L SVL  C 
Sbjct: 282 KARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCA 341

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     GRQVH E VKS F  DV V++ L+ +Y++  ++   R++FD  +  ++V W S
Sbjct: 342 SLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNS 401

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKN 208
           +++GYA++ + +  L++FH M   G+  +  TF  VL   +  G V   +++  +M  K 
Sbjct: 402 IITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKY 461

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFET 267
             E  T     ++ +  ++ +V DA  +   M  + D+I W +++           A  T
Sbjct: 462 LVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLG----------ACRT 511

Query: 268 FNNMGLA 274
             NM LA
Sbjct: 512 HMNMNLA 518


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/808 (34%), Positives = 433/808 (53%), Gaps = 80/808 (9%)

Query: 109 FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
           F    ++ T +V  Y+     +    V + +  S  V W  L+  + +    D  + +  
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           RM   G + + FT   VL    +          H ++  NG E    +CNAL++MY +  
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166

Query: 229 MVRDARAVFDGMEDR---DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT---RST 282
            + +A  +FD +  R   D I+WNS+V+ +V +     A + F+ M L   E     RS 
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226

Query: 283 FVSVIKL---CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
            +S++ +   C + K +   +++H   ++NG   D  +   L+ AY+KCG ME+A K+F+
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286

Query: 340 MMREMKDVVSWTAMISGHLQNG----AIDL------------------------------ 365
           MM E KDVVSW AM++G+ Q+G    A +L                              
Sbjct: 287 MM-EFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345

Query: 366 -AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT----------NYE 410
            A+N F QM   G  PN  T   +L+A  ++  F    ++HA+ +K             +
Sbjct: 346 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 405

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +   V  AL++ Y K      A  +F+ I  +E+++V W+ M+ G+AQ GD+  A+K++ 
Sbjct: 406 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 465

Query: 469 QLTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL--NNALCVSSALVTM 524
           ++ SE  GV PN +T S ++ AC A  AA+  GKQ HA  ++     ++A  V++ L+ M
Sbjct: 466 EMISEPYGVAPNAYTISCILMAC-AHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 524

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           YSK G++++A  VF    ++  +SW SM+ GY  HG   +AL++F +MR+     D ITF
Sbjct: 525 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 584

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + V+ AC+H G+VD+G  YFD M  ++ + P  EHY+  +DL +R G L+KA   +  MP
Sbjct: 585 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMP 644

Query: 645 FAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERAR 690
              +A VW  +L+ACR              L+ +   +   Y L+SN+YA  G W++ AR
Sbjct: 645 MEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVAR 704

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           +R LM    +KK  G SW++ +  T SF  GD SHP S QIY+ LE L  R+K  GY P+
Sbjct: 705 IRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPE 764

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
           T++ L D+D+E K  +L +HSE+LA+A+GL+ T  G P++I KNLRVCGDCH+    ISK
Sbjct: 765 TNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISK 824

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +   +IVVRD +RFHHFK G CSCG YW
Sbjct: 825 IVDHEIVVRDPSRFHHFKNGSCSCGGYW 852



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 165/613 (26%), Positives = 278/613 (45%), Gaps = 66/613 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           + +R      V +N L+ E+ +      A+N+   + R G  L   TL  VLK CG L  
Sbjct: 73  VLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPS 132

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE---SNVVSWTSL 150
           +  G   H     +GF  +V +  +LV +Y R  ++E+   +FD++ +    +V+SW S+
Sbjct: 133 YRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSI 192

Query: 151 LSGYARNKMNDRVLELFHRMQ-VEGIKPNS-----FTFSTVLGVLADEGIVATAVQVHTM 204
           +S + ++      L+LF +M  +   KP +      +   +L        V    +VH  
Sbjct: 193 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 252

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            I+NG  +   V NALI  Y K  ++ +A  VF+ ME +D ++WN+MVAGY  +     A
Sbjct: 253 AIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAA 312

Query: 265 FETFNNMG-----------------------------------LAGAELTRSTFVSVIKL 289
           FE F NM                                     +G+     T +SV+  
Sbjct: 313 FELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSA 372

Query: 290 CATTKELRLARQLHSQVLKN----------GIDFDHNIRTGLMVAYSKCGKMEDASKIF- 338
           CA+        ++H+  LKN          G D D  +   L+  YSKC   + A  IF 
Sbjct: 373 CASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFD 432

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSIILTAQPAVS 396
            +  E ++VV+WT MI GH Q G  + A+  F +M  E  GV PN +T S IL A   ++
Sbjct: 433 DIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLA 492

Query: 397 PF----QVHAHIIKTN-YEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                 Q+HA++++ + Y+ S + V   L+N Y K G +D A  VF+ + +K  ++W++M
Sbjct: 493 AIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSM 552

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKA 509
           + GY   G    A+ I+ ++   G  P++ TF  V+ AC+     V+QG   F + S   
Sbjct: 553 MTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH-CGMVDQGLSYFDSMSADY 611

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEV 568
            L       +  + + ++ G ++ A +  K    +   V W +++     H + + A   
Sbjct: 612 GLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHA 671

Query: 569 FKEMRRQDLEFDG 581
             ++   + E DG
Sbjct: 672 LNKLVEMNAENDG 684



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 174/378 (46%), Gaps = 46/378 (12%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +  ++  Y +     EALN+F  +   G      T+ SVL  C  L     G ++H
Sbjct: 327 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 386

Query: 102 CECVKS----------GFARDVNVSTSLVDLYMRTNNVEDGRRVFDD--MNESNVVSWTS 149
              +K+          G   D+ V  +L+D+Y +  + +  R +FDD  + E NVV+WT 
Sbjct: 387 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 446

Query: 150 LLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           ++ G+A+   ++  L+LF  M  E  G+ PN++T S +L   A    +    Q+H  V++
Sbjct: 447 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 506

Query: 208 NGGEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +     ++  V N LI+MY K   V  AR VFD M  + +I+W SM+ GY  +    EA 
Sbjct: 507 HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 566

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT--GLM- 322
           + F+ M  AG      TF+ V+  C+           H  ++  G+ +  ++    GL  
Sbjct: 567 DIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLTP 615

Query: 323 ----VAY-----SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL---AVNFF 370
                AY     ++ G+++ A K    M      V W A++S    +  ++L   A+N  
Sbjct: 616 RAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKL 675

Query: 371 CQMTREGVRPNGFTYSII 388
            +M  E    N  +Y++I
Sbjct: 676 VEMNAE----NDGSYTLI 689



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 6/173 (3%)

Query: 29  KKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGI--RRLGLPLFGSTLSSV 84
           K  +S+FD  P  +RN V +  ++  + +     +AL LF+ +     G+     T+S +
Sbjct: 425 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 484

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGF--ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           L  C  L     G+Q+H   ++     +    V+  L+++Y +  +V+  R VFD M++ 
Sbjct: 485 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 544

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           + +SWTS+++GY  +      L++F +M+  G  P+  TF  VL   +  G+V
Sbjct: 545 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 597


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 294/848 (34%), Positives = 471/848 (55%), Gaps = 53/848 (6%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-----GLPL------FGST 80
            Q +FD +P R+ + +N L+  Y +     +A+  F   R +     G+ L      FGS 
Sbjct: 227  QRVFDTTPVRDLITWNALMSVYAKRG---DAICTFTLFRAMQYDDSGIELRPTEHTFGSL 283

Query: 81   LSSV-LKTCGC-LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
            +++  L +C   L D +F R      +KSG + D+ V ++LV  + R   +++ + ++  
Sbjct: 284  ITATYLSSCSLGLLDQLFVR-----VLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLG 338

Query: 139  MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD----EGI 194
            + E N V+   L++G  + +  +   E+F   + +    N  T+  +L  +A+    E  
Sbjct: 339  LKERNAVTLNGLIAGLVKQQHGEAAAEIFMGAR-DSAAVNVDTYVVLLSAIAEFSTAEQG 397

Query: 195  VATAVQVHTMVIKNGGEV-VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
            +    +VH  V++ G      +V N L++MY K   +  A  VF  ME RD I+WN+++ 
Sbjct: 398  LRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIIT 457

Query: 254  GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
                N     A   +  M       +    +S +  CA    L   +QLH   +K G+  
Sbjct: 458  ALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYL 517

Query: 314  DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA-IDLAVNFFCQ 372
            D ++   L+  Y +CG+M +  +IF+ M    DVVSW +++     + A I  +V  F  
Sbjct: 518  DTSVSNALVKMYGECGRMSECWEIFNSM-SAHDVVSWNSIMGVMASSQAPITESVQVFSN 576

Query: 373  MTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
            M + G+ PN  T+   L A   +S      Q+H+ ++K    +  +V  AL++ Y K G 
Sbjct: 577  MMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGD 636

Query: 429  LDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +D   ++F  +   +D ++W++M++GY   G  + A+     +       +  TFS V+N
Sbjct: 637  VDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLN 696

Query: 488  ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
            AC A  AA+E+G + HA  +++ L + + V SALV MYSK G I+ AS+VF    +++  
Sbjct: 697  AC-ASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEF 755

Query: 548  SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
            SWNSMI GYA+HG  +KALE+F+EM+      D +TF+ V++AC+HAGLV+ G  YF++M
Sbjct: 756  SWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM 815

Query: 608  VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------- 660
              ++ I P +EHYSC++DL  RAG L+K  + + RMP   +  +WRTVL AC+       
Sbjct: 816  -EDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAK 874

Query: 661  ----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                      L+ L+P +   YVL S  +AA G W++ A+ R  M    VKKEAG SW+ 
Sbjct: 875  IDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVT 934

Query: 711  VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
            + +  ++F+AGD SHP + +IY KL  L  ++++AGY P T YVL D+++E+KE +L  H
Sbjct: 935  LTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEENKEELLRYH 994

Query: 771  SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
            SE+LA+AF L  + +G P++I+KNLRVCGDCHT  + IS++  R I++RD+ RFHHFK+G
Sbjct: 995  SEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAFRYISQIVGRQIILRDSIRFHHFKDG 1054

Query: 831  LCSCGDYW 838
             CSCGDYW
Sbjct: 1055 KCSCGDYW 1062



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 170/580 (29%), Positives = 294/580 (50%), Gaps = 25/580 (4%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H E VK G   D+ ++  LV+ Y +   ++  RRVFD M   N VSWT L+SG+  + +
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 160 NDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGI--VATAVQVHTMVIKNGGEVVTS 215
            +    LF  M  E  G +P SFTF +VL    D G   +  AVQVH +V K      T+
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 216 VCNALISMYLKSKMVRD--ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           VCNALISMY    +     A+ VFD    RD ITWN++++ Y      +  F  F  M  
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266

Query: 274 --AGAEL--TRSTFVSVIKLC-ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             +G EL  T  TF S+I     ++  L L  QL  +VLK+G   D  + + L+ A+++ 
Sbjct: 267 DDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARH 326

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +++A  I+  ++E ++ V+   +I+G ++    + A   F    R+    N  TY ++
Sbjct: 327 GMLDEAKDIYLGLKE-RNAVTLNGLIAGLVKQQHGEAAAEIF-MGARDSAAVNVDTYVVL 384

Query: 389 LTAQPAVSPF--------QVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           L+A    S          +VHAH+++  +  +  +V   L+N Y K G +D+A +VF+L+
Sbjct: 385 LSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLM 444

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           + +D ++W+ ++    Q G  E A+  Y  +    + P+ F   S +++C A    +  G
Sbjct: 445 EARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSC-AGLGLLAAG 503

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA-Q 558
           +Q H  ++K  L     VS+ALV MY + G +    E+F      D+VSWNS++   A  
Sbjct: 504 QQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASS 563

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
                ++++VF  M +  L  + +TF+  + A T   +++ G+Q   +M+ +H +     
Sbjct: 564 QAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVML-KHGVTEDNA 622

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
             + ++  Y+++G ++    + +RM     A  W ++++ 
Sbjct: 623 VDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISG 662



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 228/484 (47%), Gaps = 23/484 (4%)

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           G  A+   +H  V+K G      + N L++ Y K   +  AR VFDGM  R++++W  ++
Sbjct: 79  GCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLI 138

Query: 253 AGYVTNELHMEAFETFNNM--GLAGAELTRSTFVSVIKLCATTKELRL--ARQLHSQVLK 308
           +G+V + L  +AF  F  M     G   T  TF SV++ C  +   RL  A Q+H  V K
Sbjct: 139 SGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSK 198

Query: 309 NGIDFDHNIRTGLMVAYSKC--GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                +  +   L+  Y  C  G    A ++F     ++D+++W A++S + + G     
Sbjct: 199 TEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTT-PVRDLITWNALMSVYAKRGDAICT 257

Query: 367 VNFFCQMTREG----VRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGT 417
              F  M  +     +RP   T+  ++TA    S       Q+   ++K+       VG+
Sbjct: 258 FTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGS 317

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY---RQLTSEG 474
           AL++A+ + G+LDEA  ++  + E++ V  + ++AG  +    E A +I+   R   +  
Sbjct: 318 ALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVN 377

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA-KLNNALCVSSALVTMYSKKGNIES 533
           V       S++    TA    + +G++ HA  ++A  +   + VS+ LV MY+K G I+ 
Sbjct: 378 VDTYVVLLSAIAEFSTAEQ-GLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDK 436

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A  VF+    RD +SWN++I    Q+G+ + A+  +  MR+  +       I  +++C  
Sbjct: 437 ACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAG 496

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            GL+  GQQ     V +  +Y      + +V +Y   G + +  +I N M  A     W 
Sbjct: 497 LGLLAAGQQLHCDAV-KWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMS-AHDVVSWN 554

Query: 654 TVLA 657
           +++ 
Sbjct: 555 SIMG 558


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/765 (34%), Positives = 434/765 (56%), Gaps = 39/765 (5%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H   V S   ++V +S  LV+LY    NV   R  FD ++  +V +W  ++SGY R   
Sbjct: 73  LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGY 132

Query: 160 NDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +  V+  F   M   G++P+  TF +VL    +   V    ++H + +K G      V  
Sbjct: 133 SSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMWDVYVAA 189

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +LI +Y +   V +AR +FD M  RD  +WN+M++GY  +    EA    + +      +
Sbjct: 190 SLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGL----RAM 245

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T VS++  C    +      +HS  +K+G++ +  +   L+  Y++ G ++D  K+F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVF 305

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SII-----L 389
             M  ++D++SW ++I  +  N     A+  F +M    ++P+  T     SI+     +
Sbjct: 306 DRMY-VRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEI 364

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            A  +V  F +     K  + +  ++G A++  Y K G++D A  VF  +  KD+++W+ 
Sbjct: 365 RACRSVQGFTLR----KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNT 420

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEG--VKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +++GYAQ G    A+++Y  +  EG  +  N+ T+ SV+ AC+  + A+ QG + H   +
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACS-QAGALRQGMKLHGRLL 479

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K  L   + V ++L  MY K G ++ A  +F +  + + V WN++I  +  HGH +KA+ 
Sbjct: 480 KNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 539

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +FKEM  + ++ D ITF+ +++AC+H+GLVDEG+  F++M  ++ I P+++HY CMVDLY
Sbjct: 540 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLY 599

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            RAG LE A++ I  MP    A++W  +L+ACR              L  ++P     +V
Sbjct: 600 GRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHV 659

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LLSNMYA+ G W+    +R + + + ++K  G+S +EV NK   F  G+ +HP   ++Y 
Sbjct: 660 LLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYR 719

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           +L  L  +LK  GY PD  +VLQD++D+ KE IL  HSERLA+AF L+ TPA   ++I K
Sbjct: 720 ELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFK 779

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVCGDCH+V K ISK+  R+I+VRD+NRFHHFK G+CSCGDYW
Sbjct: 780 NLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 261/539 (48%), Gaps = 21/539 (3%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           FD    R+   +N ++  Y R     E +  F L +   GL     T  SVLK C  + D
Sbjct: 109 FDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD 168

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G ++HC  +K GF  DV V+ SL+ LY R   V + R +FD+M   ++ SW +++SG
Sbjct: 169 ---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISG 225

Query: 154 YARNKMNDRVLELFHRMQVEGIKP-NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           Y ++      L L      +G++  +S T  ++L    + G     V +H+  IK+G E 
Sbjct: 226 YCQSGNAKEALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V N LI +Y +   ++D + VFD M  RD I+WNS++  Y  NE  + A   F  M 
Sbjct: 281 ELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMR 340

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-DHNIRTGLMVAYSKCGKM 331
           L+  +    T +S+  + +   E+R  R +    L+ G    D  I   ++V Y+K G +
Sbjct: 341 LSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 400

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIIL 389
           + A  +F+ +   KDV+SW  +ISG+ QNG    A+  +  M  EG  +  N  T+  +L
Sbjct: 401 DSARAVFNWLPN-KDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVL 459

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A           ++H  ++K        VGT+L + Y K G LD+A  +F  I   + V
Sbjct: 460 PACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSV 519

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHA 504
            W+ ++A +   G  E AV +++++  EGVKP+  TF ++++AC+  S  V++G+  F  
Sbjct: 520 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH-SGLVDEGEWCFEM 578

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
                 +  +L     +V +Y + G +E A    K    + D   W +++     HG+ 
Sbjct: 579 MQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNV 637



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 225/429 (52%), Gaps = 16/429 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P R+   +N ++  YC+    +EAL L  G+R +       T+ S+L  C    D
Sbjct: 207 LFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMD----SVTVVSLLSACTEAGD 262

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  +H   +K G   ++ VS  L+DLY    +++D ++VFD M   +++SW S++  
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKA 322

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG--E 211
           Y  N+   R + LF  M++  I+P+  T  ++  +L+  G +     V    ++ G   E
Sbjct: 323 YELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLE 382

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            +T + NA++ MY K  +V  ARAVF+ + ++D I+WN++++GY  N    EA E +N M
Sbjct: 383 DIT-IGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIM 441

Query: 272 GLAGAELT--RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
              G E++  + T+VSV+  C+    LR   +LH ++LKNG+  D  + T L   Y KCG
Sbjct: 442 EEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCG 501

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +++DA  +F  +  +   V W  +I+ H  +G  + AV  F +M  EGV+P+  T+  +L
Sbjct: 502 RLDDALSLFYQIPRVNS-VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 560

Query: 390 TA---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKD 443
           +A      V   +    +++T+Y  + S+     +++ Y + G L+ A    + +  + D
Sbjct: 561 SACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPD 620

Query: 444 IVAWSAMLA 452
              W A+L+
Sbjct: 621 ASIWGALLS 629



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++  K  HA  + +     +C+S+ LV +Y   GN+  A   F     RD+ +WN MI G
Sbjct: 67  LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126

Query: 556 YAQHGHTKKALEVFKE-MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           Y + G++ + +  F   M    L+ D  TF  V+ AC +   V +G +   + +    ++
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMW 183

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
                 S ++ LY R G +  A  + + MP
Sbjct: 184 DVYVAAS-LIHLYCRYGAVVNARILFDEMP 212


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 270/764 (35%), Positives = 431/764 (56%), Gaps = 38/764 (4%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H   V S   ++V +S  LV+LY    NV   R  FD +   +V +W  ++SGY R   
Sbjct: 73  LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132

Query: 160 NDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +  V+  F   M   G+ P+  TF +VL        V    ++H + +K G      V  
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAA 189

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +LI +Y + K V +AR +FD M  RD  +WN+M++GY  +    EA    N +      +
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAM 245

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T VS++  C    +      +HS  +K+G++ +  +   L+  Y++ G++ D  K+F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SII-----L 389
             M  ++D++SW ++I  +  N     A++ F +M    ++P+  T     SI+     +
Sbjct: 306 DRMY-VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            A  +V  F +     K  + +  ++G A++  Y K G++D A  VF  +   D+++W+ 
Sbjct: 365 RACRSVQGFTLR----KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +++GYAQ G    A+++Y  +  EG +  N+ T+ SV+ AC+  + A+ QG + H   +K
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS-QAGALRQGMKLHGRLLK 479

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L   + V ++L  MY K G +E A  +F +  + + V WN++I  +  HGH +KA+ +
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           FKEM  + ++ D ITF+ +++AC+H+GLVDEGQ  F++M  ++ I P+++HY CMVD+Y 
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG LE A+  I  M     A++W  +L+ACR              L  ++P     +VL
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSNMYA+ G W+    +R + + + ++K  G+S +EV NK   F  G+ +HP   ++Y +
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L  L  +LK  GY PD  +VLQD++D+ KE IL  HSERLAIAF L+ATPA   ++I KN
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCH+V K ISK+  R+I+VRD+NRFHHFK G+CSCGDYW
Sbjct: 780 LRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 260/537 (48%), Gaps = 18/537 (3%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           FD    R+   +N ++  Y R     E +  F L +   GL     T  SVLK C  + D
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 168

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G ++HC  +K GF  DV V+ SL+ LY R   V + R +FD+M   ++ SW +++SG
Sbjct: 169 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 225

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y ++      L L + ++      +S T  ++L    + G     V +H+  IK+G E  
Sbjct: 226 YCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N LI +Y +   +RD + VFD M  RD I+WNS++  Y  NE  + A   F  M L
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL 341

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-DHNIRTGLMVAYSKCGKME 332
           +  +    T +S+  + +   ++R  R +    L+ G    D  I   ++V Y+K G ++
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVD 401

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTA 391
            A  +F+ +    DV+SW  +ISG+ QNG    A+  +  M  EG +  N  T+  +L A
Sbjct: 402 SARAVFNWLPN-TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPA 460

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
                      ++H  ++K        V T+L + Y K G L++A  +F  I   + V W
Sbjct: 461 CSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 520

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACS 506
           + ++A +   G  E AV +++++  EGVKP+  TF ++++AC+  S  V++G+  F    
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS-HSGLVDEGQWCFEMMQ 579

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
               +  +L     +V MY + G +E+A +  K    + D   W +++     HG+ 
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 220/428 (51%), Gaps = 15/428 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P R+   +N ++  YC+    +EAL L  G+R +       T+ S+L  C    D
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGD 262

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  +H   +K G   ++ VS  L+DLY     + D ++VFD M   +++SW S++  
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG--E 211
           Y  N+   R + LF  M++  I+P+  T  ++  +L+  G +     V    ++ G   E
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            +T + NA++ MY K  +V  ARAVF+ + + D I+WN++++GY  N    EA E +N M
Sbjct: 383 DIT-IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441

Query: 272 GLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
              G     + T+VSV+  C+    LR   +LH ++LKNG+  D  + T L   Y KCG+
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +EDA  +F  +  +   V W  +I+ H  +G  + AV  F +M  EGV+P+  T+  +L+
Sbjct: 502 LEDALSLFYQIPRVNS-VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560

Query: 391 A---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKDI 444
           A      V   Q    +++T+Y  + S+     +++ Y + G L+ A K  + +  + D 
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620

Query: 445 VAWSAMLA 452
             W A+L+
Sbjct: 621 SIWGALLS 628



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 25/349 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +FDR   R+ + +N ++  Y  +     A++LF  +R   +     TL S+      L
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361

Query: 92  FDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            D    R V    ++ G F  D+ +  ++V +Y +   V+  R VF+ +  ++V+SW ++
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421

Query: 151 LSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +SGYA+N      +E+++ M+ EG I  N  T+ +VL   +  G +   +++H  ++KNG
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             +   V  +L  MY K   + DA ++F  +   +S+ WN+++A +  +    +A   F 
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG------IDFDHNI-----R 318
            M   G +    TFV+++  C+           HS ++  G      +  D+ I      
Sbjct: 542 EMLDEGVKPDHITFVTLLSACS-----------HSGLVDEGQWCFEMMQTDYGITPSLKH 590

Query: 319 TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            G MV  Y + G++E A K    M    D   W A++S    +G +DL 
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 5/150 (3%)

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++  K  HA  + +K    +C+S+ LV +Y   GN+  A   F   + RD+ +WN MI G
Sbjct: 67  LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126

Query: 556 YAQHGHTKKALEVFKE-MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           Y + G++ + +  F   M    L  D  TF  V+ AC     V +G +   + +    ++
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMW 183

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
                 S ++ LYSR   +  A  + + MP
Sbjct: 184 DVYVAAS-LIHLYSRYKAVGNARILFDEMP 212


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/699 (37%), Positives = 402/699 (57%), Gaps = 84/699 (12%)

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
           M+ KS  + DAR VF  M +RD+++W  MV G        EA +T  +M   G   T+ T
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF---- 338
             +V+  CA T+   + R++HS V+K G+     +   ++  Y KCG  E A+ +F    
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 339 ------------------------SMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQ 372
                                   S+   M D  +VSW AMI+G+ QNG    A+  F +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 373 MTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKT--------------NYEKSF 413
           M  E  + P+ FT + +L+A   +       QVHA+I++T               Y KS 
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 414 SVG-------------------TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           SV                    TALL  YVK G ++ A ++F +++ +D+VAW+AM+ GY
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q G  + A+ ++R + + G +PN +T ++V++ C A  A ++ GKQ H  +I++ L  +
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVC-ASLACLDYGKQIHCRAIRSLLEQS 359

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
             VS+A++TMY++ G+   A  +F +   +++ ++W SMI   AQHG  ++A+ +F+EM 
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           R  +E D IT++GV++AC+HAG V+EG++Y+D + NEH I P M HY+CMVDL +RAG+ 
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
            +A + I RMP    A  W ++L+ACR              L+S+ P++S  Y  ++N+Y
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 539

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           +A G W + AR+ K   ++ V+KE G+SW  +++K + F A D+ HPQ + +Y+    + 
Sbjct: 540 SACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMW 599

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             +K AG+ PD   VL D+DDE KE +LS+HSE+LAIAFGL++TP    L+++KNLRVC 
Sbjct: 600 EEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 659

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH  IK ISK+  R+I+VRD  RFHHF++GLCSC DYW
Sbjct: 660 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 246/522 (47%), Gaps = 86/522 (16%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           ++ ++  + D R VF +M E + VSWT ++ G  R       ++    M  +G  P  FT
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK-----------SKM- 229
            + VL   A     A   +VH+ V+K G      V N++++MY K            +M 
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 230 VRD-------------------ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           VR                    A ++F+ M DR  ++WN+M+AGY  N L  +A + F+ 
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 271 M----GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           M     +A  E    T  SV+  CA    +R+ +Q+H+ +L+  + ++  +   L+  Y+
Sbjct: 181 MLHESSMAPDEF---TITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 237

Query: 327 KCGKMEDASKI-------------FSMM-------------REM------KDVVSWTAMI 354
           K G +E+A +I             F+ +             REM      +DVV+WTAMI
Sbjct: 238 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 297

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE 410
            G+ QNG  D A++ F  M   G  PN +T + +L+   +++      Q+H   I++  E
Sbjct: 298 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 357

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +S SV  A++  Y + G    A ++F+ +   K+ + W++M+   AQ G  E AV ++ +
Sbjct: 358 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 417

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH-----ACSIKAKLNNALCVSSALVTM 524
           +   GV+P+  T+  V++AC+  +  V +GK+++        I  ++++  C    +V +
Sbjct: 418 MLRAGVEPDRITYVGVLSACS-HAGFVNEGKRYYDQIKNEHQIAPEMSHYAC----MVDL 472

Query: 525 YSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
            ++ G    A E  +R   + D ++W S++     H + + A
Sbjct: 473 LARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELA 514



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/532 (24%), Positives = 237/532 (44%), Gaps = 74/532 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P+R+ V +  ++    R     EA+   L +   G      TL++VL +C   
Sbjct: 12  RGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 71

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-------------- 137
                GR+VH   VK G    V V+ S++++Y +  + E    VF+              
Sbjct: 72  QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMV 131

Query: 138 ---------DMNES--------NVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNS 179
                    D+ ES        ++VSW ++++GY +N ++ + L+LF RM  E  + P+ 
Sbjct: 132 SLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDE 191

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           FT ++VL   A+ G V    QVH  +++      + V NALIS Y KS  V +AR + D 
Sbjct: 192 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQ 251

Query: 240 ---------------------------------MEDRDSITWNSMVAGYVTNELHMEAFE 266
                                            M +RD + W +M+ GY  N  + EA +
Sbjct: 252 SMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAID 311

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F +M   G E    T  +V+ +CA+   L   +Q+H + +++ ++   ++   ++  Y+
Sbjct: 312 LFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYA 371

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           + G    A ++F  +   K+ ++WT+MI    Q+G  + AV  F +M R GV P+  TY 
Sbjct: 372 RSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYV 431

Query: 387 IILTA---QPAVSPFQVHAHIIKTNYE--KSFSVGTALLNAYVKKGILDEAAKVFELID- 440
            +L+A      V+  + +   IK  ++     S    +++   + G+  EA +    +  
Sbjct: 432 GVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPV 491

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF-TFSSVINACTA 491
           E D +AW ++L+      + E A     +L S  + PN    +S++ N  +A
Sbjct: 492 EPDAIAWGSLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIANVYSA 541



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 200/444 (45%), Gaps = 59/444 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTC 88
           +SLF+  P R+ V +N ++  Y ++ L  +AL LF   L    +    F  T++SVL  C
Sbjct: 144 ESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEF--TITSVLSAC 201

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD---------- 138
             L +   G+QVH   +++  A +  V+ +L+  Y ++ +VE+ RR+ D           
Sbjct: 202 ANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVIS 261

Query: 139 -----------------------MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
                                  MN  +VV+WT+++ GY +N  ND  ++LF  M   G 
Sbjct: 262 FTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGP 321

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           +PNS+T + VL V A    +    Q+H   I++  E  +SV NA+I+MY +S     AR 
Sbjct: 322 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARR 381

Query: 236 VFDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
           +FD +  R ++ITW SM+     +    EA   F  M  AG E  R T+V V+  C+   
Sbjct: 382 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 441

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGL-----MV-AYSKCGKMEDASKIFSMMREMKDVV 348
            +   ++ + Q+ KN    +H I   +     MV   ++ G   +A +    M    D +
Sbjct: 442 FVNEGKRYYDQI-KN----EHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAI 496

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTRE---GVRPNGF-TYSIILTAQPAVSPFQVHAHI 404
           +W +++S    +   +LA     ++  E    + PN    YS I     A   +   A I
Sbjct: 497 AWGSLLSACRVHKNAELA-----ELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARI 551

Query: 405 IKTNYEKSFSVGTALLNAYVKKGI 428
            K   EK+    T     +++  I
Sbjct: 552 WKARKEKAVRKETGFSWTHIRSKI 575


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 268/711 (37%), Positives = 413/711 (58%), Gaps = 54/711 (7%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P +F  + +L   A  G +A A +V   +      + T   NAL+S    S++V D   +
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMPDP--NLFTR--NALLSALAHSRLVPDMERL 101

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKE 295
           F  M +RD++++N+++ G+ +      + + +  +        TR T  ++I + +   +
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM----------- 344
             L   +H QVL+ G      + + L+  Y+K G + DA ++F  M              
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221

Query: 345 -------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
                              +D ++WT M++G  QNG    A++ F +M  EGV  + +T+
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             ILTA  A++      Q+HA+I +T YE +  VG+AL++ Y K   +  A  VF  +  
Sbjct: 282 GSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           ++I++W+AM+ GY Q   +E AV+ + ++  +G+KP++FT  SVI++C A  A++E+G Q
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC-ANLASLEEGAQ 400

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
           FH  ++ + L   + VS+ALVT+Y K G+IE A  +F      D VSW +++ GYAQ G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
            K+ +++F++M    L+ DG+TFIGV++AC+ AGLV++G  YFD M  +H I P  +HY+
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPH 667
           CM+DLYSR+G  ++A + I +MP +  A  W T+L++CRL              +   P 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           + A YVLL +M+AA G W E A +R+ M DR+VKKE G SWI+ KNK + F A D SHP 
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 640

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
           S++IY KLE L++++ + GYKPD S VL D+ D  K  ++S HSE+LAIAFGL+  P   
Sbjct: 641 SSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEM 700

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P++IVKNLRVC DCH   K ISK+  RDI+VRD  RFH F +G CSCGD+W
Sbjct: 701 PIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 243/527 (46%), Gaps = 78/527 (14%)

Query: 100 VHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV-------------- 144
           VHC  +K+   A    +   L+  Y ++  +   RRVFD+M + N+              
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 145 -----------------VSWTSLLSGYARNKMNDRVLELFHR-MQVEGIKPNSFTFSTVL 186
                            VS+ +L++G++      R ++L+   ++ E ++P   T S ++
Sbjct: 94  LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 187 GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME----- 241
            V +     A    VH  V++ G      V + L+ MY K  ++RDAR VF  ME     
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213

Query: 242 --------------------------DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
                                     DRDSITW +MV G   N L +EA + F  M   G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
             + + TF S++  C     L   +Q+H+ + +   + +  + + L+  YSKC  +  A 
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F  M   ++++SWTAMI G+ QN   + AV  F +M  +G++P+ FT   ++++   +
Sbjct: 334 AVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +      Q H   + +   +  +V  AL+  Y K G +++A ++F+ +   D V+W+A++
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK--- 508
            GYAQ G  +  + ++ ++ + G+KP+  TF  V++AC+  +  VE+G  +     K   
Sbjct: 453 TGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSR-AGLVEKGCDYFDSMQKDHG 511

Query: 509 -AKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMI 553
              +++     + ++ +YS+ G  + A E  K+     D   W +++
Sbjct: 512 IVPIDDHY---TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 209/468 (44%), Gaps = 39/468 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGC 90
           + LF   P+R+ V YN L+  +        ++ L+  + R   +     TLS+++     
Sbjct: 99  ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV----- 145
           L D   G  VHC+ ++ GF     V + LVD+Y +   + D RRVF +M    VV     
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218

Query: 146 --------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
                                     +WT++++G  +N +    L++F RM+ EG+  + 
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           +TF ++L        +    Q+H  + +   E    V +AL+ MY K + +R A AVF  
Sbjct: 279 YTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRR 338

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  R+ I+W +M+ GY  N    EA   F+ M + G +    T  SVI  CA    L   
Sbjct: 339 MTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG 398

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            Q H   L +G+     +   L+  Y KCG +EDA ++F  M    D VSWTA+++G+ Q
Sbjct: 399 AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVTGYAQ 457

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG--- 416
            G     ++ F +M   G++P+G T+  +L+A       +       +  +    V    
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDD 517

Query: 417 --TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
             T +++ Y + G   EA + + ++    D   W+ +L+     G+ E
Sbjct: 518 HYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 165/347 (47%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF     R+ + +  ++    ++ L  EAL++F  +R  G+ +   T  S+L  CG L
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H    ++ +  +V V ++LVD+Y +  ++     VF  M   N++SWT+++
Sbjct: 292 AALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMI 351

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY +N  ++  +  F  MQ++GIKP+ FT  +V+   A+   +    Q H + + +G  
Sbjct: 352 VGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 411

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V NAL+++Y K   + DA  +FD M   D ++W ++V GY       E  + F  M
Sbjct: 412 RYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNI------RT 319
              G +    TF+ V+  C+            + +++ G D+      DH I       T
Sbjct: 472 LANGLKPDGVTFIGVLSACS-----------RAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            ++  YS+ G+ ++A +    M    D   W  ++S     G +++ 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/764 (34%), Positives = 433/764 (56%), Gaps = 76/764 (9%)

Query: 95  VFGRQVHCECVKSGF----ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            + R+  CE   S F     R      +++  Y+  N  +  R+VF+ M + +++SW  +
Sbjct: 69  AYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVM 128

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNG 209
           LSGY +N        LF++M  + +     +++ +L   A  G V  A ++   M++KN 
Sbjct: 129 LSGYVKNGNLSAARALFNQMPEKDV----VSWNAMLSGFAQNGFVEEARKIFDQMLVKN- 183

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E+     N L+S Y+++  + DAR +FD   D + ++WN ++ GYV             
Sbjct: 184 -EIS---WNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRK----------- 228

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKC 328
                                   K L  AR L  ++ +++ I +  NI   ++  Y++ 
Sbjct: 229 ------------------------KRLDDARSLFDRMPVRDKISW--NI---MITGYAQN 259

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G + +A ++F  +  ++DV +WTAM+SG +QNG +D A   F +M  +    N  +++ +
Sbjct: 260 GLLSEARRLFEEL-PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAM 314

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
           +         +    +      ++ S    ++  Y + G +D+A  +F+ + ++D ++W+
Sbjct: 315 IAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWA 374

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM++GYAQ G +E A+ ++ ++  +G   N    +  +++C A  AA+E GKQ H   +K
Sbjct: 375 AMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC-AEIAALELGKQLHGRLVK 433

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           A         +AL+ MY K G+IE A +VF+   ++D+VSWN+MI GYA+HG  K+AL +
Sbjct: 434 AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALAL 493

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M+   ++ D +T +GV++AC+H GLVD+G +YF+ M   + I    +HY+CM+DL  
Sbjct: 494 FESMK-MTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           RAG L++A++++  MPF   A  W  +L A R+                ++P +S +YVL
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVL 612

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YAA+G W+E   +R  M D+ VKK  GYSW+E++NKT+ F  GD SHP++ +IY+ 
Sbjct: 613 LSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAY 672

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           LEEL   LK  G+   T  VL D+++E KE +L  HSE+LA+AFG+++ P G P++++KN
Sbjct: 673 LEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKN 732

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCH  IK ISK+ +R I+VRD+NRFHHF EG CSCGDYW
Sbjct: 733 LRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 278/575 (48%), Gaps = 75/575 (13%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V++NR +  Y R    + AL++F G+RR     + + +S      G L ++ F     
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMIS------GYLSNNKF----- 107

Query: 102 CECVKSGFA----RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
            +C +  F     RD+     ++  Y++  N+   R +F+ M E +VVSW ++LSG+A+N
Sbjct: 108 -DCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              +   ++F +M V+    N  +++ +L      G +  A ++     K   E+V+  C
Sbjct: 167 GFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDS--KMDWEIVSWNC 220

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA- 276
             L+  Y++ K + DAR++FD M  RD I+WN M+ GY  N L  EA   F  + +    
Sbjct: 221 --LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF 278

Query: 277 ----------------ELTR----------STFVSVIKLCATTKELRLARQLHSQVLKNG 310
                           E TR           ++ ++I     ++++  AR+L  Q+    
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN 338

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
               + + TG    Y++CG ++ A  +F  M + +D +SW AMISG+ Q+G  + A++ F
Sbjct: 339 TSSWNTMVTG----YAQCGNIDQAKILFDEMPQ-RDCISWAAMISGYAQSGQSEEALHLF 393

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M R+G   N    +  L++   ++      Q+H  ++K  ++  +  G ALL  Y K 
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC 453

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G ++EA  VFE I EKDIV+W+ M+AGYA+ G  + A+ ++  +    +KP++ T   V+
Sbjct: 454 GSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVL 512

Query: 487 NACTAPSAAVEQGKQ-----FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           +AC+  +  V++G +     +    I A   +  C    ++ +  + G ++ A  + K  
Sbjct: 513 SACS-HTGLVDKGMEYFNSMYQNYGITANAKHYTC----MIDLLGRAGRLDEALNLMKSM 567

Query: 542 R-KRDLVSWNSMICGYAQHGHT---KKALEVFKEM 572
               D  +W +++     HG T   +KA E   EM
Sbjct: 568 PFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 205/495 (41%), Gaps = 80/495 (16%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV-----LK 86
           + +F++ P R+ + +N +L  Y ++     A  LF  +    +  + + LS       ++
Sbjct: 111 RKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               +FD +    V  E   +G          L+  Y++   +ED RR+FD   +  +VS
Sbjct: 171 EARKIFDQML---VKNEISWNG----------LLSAYVQNGRIEDARRLFDSKMDWEIVS 217

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVE----------GIKPNS----------------- 179
           W  L+ GY R K  D    LF RM V           G   N                  
Sbjct: 218 WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV 277

Query: 180 FTFSTVLGVLADEGIVATAVQ--------------------VHTMVIKNGGEVV------ 213
           F ++ ++      G++  A +                    V +  I+   E+       
Sbjct: 278 FAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR 337

Query: 214 -TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            TS  N +++ Y +   +  A+ +FD M  RD I+W +M++GY  +    EA   F  M 
Sbjct: 338 NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK 397

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G  L RS     +  CA    L L +QLH +++K G    +     L+  Y KCG +E
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIE 457

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
           +A  +F  + E KD+VSW  MI+G+ ++G    A+  F  M +  ++P+  T   +L+A 
Sbjct: 458 EAFDVFEDITE-KDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSAC 515

Query: 392 --QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKDIVA 446
                V     + + +  NY  + +    T +++   + G LDEA  + + +    D   
Sbjct: 516 SHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAAT 575

Query: 447 WSAMLAGYAQIGDTE 461
           W A+L      GDTE
Sbjct: 576 WGALLGASRIHGDTE 590



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 163/314 (51%), Gaps = 25/314 (7%)

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
           D+V W   IS +++ G  + A++ F  M R        TY+ +++   + + F     + 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRST----VTYNAMISGYLSNNKFDCARKVF 114

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           +   ++       +L+ YVK G L  A  +F  + EKD+V+W+AML+G+AQ G  E A K
Sbjct: 115 EKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI-KAKLNNALCVSSALVTM 524
           I+ Q+    +  NE +++ ++      SA V+ G+   A  +  +K++  +   + L+  
Sbjct: 175 IFDQM----LVKNEISWNGLL------SAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGG 224

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y +K  ++ A  +F R   RD +SWN MI GYAQ+G   +A  +F+E+  +D+      +
Sbjct: 225 YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FAW 280

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             +++     G++DE  + F+ M  ++ +      ++ M+  Y ++  +EKA ++ ++MP
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEV-----SWNAMIAGYVQSQQIEKARELFDQMP 335

Query: 645 FAASATVWRTVLAA 658
            + + + W T++  
Sbjct: 336 -SRNTSSWNTMVTG 348



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 138/283 (48%), Gaps = 10/283 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  PQR+ + +  ++  Y +    +EAL+LF+ ++R G  L  S L+  L +C  +  
Sbjct: 361 LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   VK+GF        +L+ +Y +  ++E+   VF+D+ E ++VSW ++++G
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YAR+      L LF  M++  IKP+  T   VL   +  G+V   ++    + +N G   
Sbjct: 481 YARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITA 539

Query: 214 TSV-CNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG---YVTNELHMEAFETF 268
            +     +I +  ++  + +A  +   M    D+ TW +++     +   EL  +A E  
Sbjct: 540 NAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKV 599

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
             M    + +    +V +  L A +   R  R++ S++   G+
Sbjct: 600 FEMEPDNSGM----YVLLSNLYAASGRWREVREMRSKMRDKGV 638



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 111/207 (53%), Gaps = 20/207 (9%)

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           I + DIV W+  ++ Y + G  E A+ ++  +     + +  T++++I      S  +  
Sbjct: 55  IVDSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMI------SGYLSN 104

Query: 499 GKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            K   A  +  K+ +   +S + +++ Y K GN+ +A  +F +  ++D+VSWN+M+ G+A
Sbjct: 105 NKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFA 164

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           Q+G  ++A ++F +M    L  + I++ G+++A    G +++ ++ FD  ++   +    
Sbjct: 165 QNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIV---- 216

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMP 644
             ++C++  Y R   L+ A  + +RMP
Sbjct: 217 -SWNCLMGGYVRKKRLDDARSLFDRMP 242


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 257/680 (37%), Positives = 398/680 (58%), Gaps = 22/680 (3%)

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           +F   +VL             ++H  V+K G +    V NAL+ MY +   V  AR VFD
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M +RD ++W++M+     N+    A E    M       +    VS++ L A T  +R+
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 299 ARQLHSQVLKNGIDFDHNI--RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            + +H+ V++N  +    +   T L+  Y+KCG +  A ++F+ + + K VVSWTAMI+G
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQ-KTVVSWTAMIAG 272

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKS 412
            +++  ++     F +M  E + PN  T   ++         Q+    HA+I++  +  S
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            ++ TAL++ Y K   +  A  +F+    +D++ W+AML+ YAQ    + A  ++ Q+ +
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
            GV+P + T  S+++ C A + A++ GK  H+   K ++     +++ALV MY+K G+I 
Sbjct: 393 SGVRPTKVTIVSLLSLC-AVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 451

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
           +A  +F     RD+  WN++I G+A HG+ ++AL++F EM RQ ++ + ITFIG++ AC+
Sbjct: 452 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 511

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           HAGLV EG++ F+ MV+   + P +EHY CMVDL  RAG+L++A ++I  MP   +  VW
Sbjct: 512 HAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVW 571

Query: 653 RTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
             ++AACRL              + ++P +    VL+SN+YAA   W + A VRK M   
Sbjct: 572 GALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTV 631

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
            +KKE G+S IEV    + FL GD SHPQ  +I   L E+  +L +AGY PDTS VL +I
Sbjct: 632 GMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNI 691

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           D+E KE  L+ HSE+LA+AFGL++T    P++IVKNLRVC DCH   KL+SK+  R I+V
Sbjct: 692 DEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIV 751

Query: 819 RDTNRFHHFKEGLCSCGDYW 838
           RD NRFHHF+EG CSCGDYW
Sbjct: 752 RDRNRFHHFREGYCSCGDYW 771



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 241/488 (49%), Gaps = 16/488 (3%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           SVLK CG +     G+++H   +K G  RDV V  +L+ +Y     VE  R VFD M E 
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +VVSW++++   +RNK  D  LEL   M    ++P+     +++ + AD   +     +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 203 TMVIKNGG--EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
             VI+N     +      AL+ MY K   +  AR +F+G+  +  ++W +M+AG + +  
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             E  + F  M          T +S+I  C  T  L+L +QLH+ +L+NG      + T 
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y KC  + +A  +F   +  +DV+ WTAM+S + Q   ID A N F QM   GVRP
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQN-RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRP 397

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
              T   +L+             VH++I K   E    + TAL++ Y K G ++ A ++F
Sbjct: 398 TKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF 457

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
                +DI  W+A++ G+A  G  E A+ I+ ++  +GVKPN+ TF  +++AC+      
Sbjct: 458 IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVT 517

Query: 497 EQGKQF----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNS 551
           E  K F    H   +  ++ +  C    +V +  + G ++ A E+ K    K + + W +
Sbjct: 518 EGKKLFEKMVHTFGLVPQIEHYGC----MVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 573

Query: 552 MICGYAQH 559
           ++     H
Sbjct: 574 LVAACRLH 581



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 224/465 (48%), Gaps = 46/465 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+  +R+ V ++ ++    R+     AL L   +  + +      + S++       +
Sbjct: 151 VFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTAN 210

Query: 94  HVFGRQVHCECVKSGFARDVNV--STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              G+ +H   +++     + V  +T+L+D+Y +  ++   R++F+ + +  VVSWT+++
Sbjct: 211 MRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMI 270

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G  R+   +   +LF RMQ E I PN  T  +++      G +    Q+H  +++NG  
Sbjct: 271 AGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFS 330

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           V  ++  AL+ MY K   +R+ARA+FD  ++RD + W +M++ Y       +AF  F+ M
Sbjct: 331 VSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM 390

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G   T+ T VS++ LCA    L L + +HS + K  ++ D  + T L+  Y+KCG +
Sbjct: 391 RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDI 450

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A ++F +    +D+  W A+I+G   +G  + A++ F +M R+GV+PN  T+      
Sbjct: 451 NAAGRLF-IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITF------ 503

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-------LIDEKDI 444
                                      LL+A    G++ E  K+FE       L+ + + 
Sbjct: 504 -------------------------IGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEH 538

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
                 L G A + D     + +  + S  +KPN   + +++ AC
Sbjct: 539 YGCMVDLLGRAGLLD-----EAHEMIKSMPIKPNTIVWGALVAAC 578



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 156/325 (48%), Gaps = 1/325 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF+   Q+  V +  ++    R +  +E   LF+ ++   +     T+ S++  CG  
Sbjct: 252 RQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFT 311

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +++GF+  + ++T+LVD+Y + +++ + R +FD     +V+ WT++L
Sbjct: 312 GALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAML 371

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S YA+    D+   LF +M+  G++P   T  ++L + A  G +     VH+ + K   E
Sbjct: 372 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 431

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           V   +  AL+ MY K   +  A  +F     RD   WN+++ G+  +    EA + F  M
Sbjct: 432 VDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 491

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGK 330
              G +    TF+ ++  C+    +   ++L  +++            G MV    + G 
Sbjct: 492 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 551

Query: 331 MEDASKIFSMMREMKDVVSWTAMIS 355
           +++A ++   M    + + W A+++
Sbjct: 552 LDEAHEMIKSMPIKPNTIVWGALVA 576


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/802 (34%), Positives = 453/802 (56%), Gaps = 46/802 (5%)

Query: 55  RDSLHQEALNLFLGIRRLGLPLFGSTL---SSVLKTCGCLFDHVFGRQVHCECVKSGFAR 111
           RDS+ +E+     G R    P FG      S  L+       H         C+      
Sbjct: 51  RDSVREES-----GRRHKPEPQFGKPPMLPSRHLRAAARQRSHRRPPAPADACITGKPDM 105

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           +V      +  +MR   V D  R+F  M   +  ++ ++L+GYA N    + L  F  + 
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP 165

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC-NALISMYLKSKMV 230
               +P+SF+++T+L  L   G+ ++   V  +   +   V  SV  N +IS +    +V
Sbjct: 166 ----RPDSFSYNTLLHAL---GVSSSLADVRALF--DEMPVKDSVSYNVMISSHANHGLV 216

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             AR  FD   ++D+++WN M+A YV N    EA E F++      E    ++ +++   
Sbjct: 217 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSR----TEWDAISWNALMAGY 272

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
               ++  A+++ +++ +  +   + + +G    Y++ G M +A ++F +   ++DV +W
Sbjct: 273 VQRSQIEEAQKMFNKMPQRDVVSWNTMVSG----YARRGDMAEARRLFDVA-PIRDVFTW 327

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE 410
           TA++SG+ QNG ++ A   F  M  +    N  +++ ++ A       +    +      
Sbjct: 328 TAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNAMMAAYVQRRMMEEAKELFDAMPC 383

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           ++ +    +L  Y + G+LDEA  +F ++ +KD V+W+AMLA Y+QIG +E  +++++++
Sbjct: 384 RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEM 443

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
              G   N   F+ V++ C A  AA+E G Q H+  IKA       V +AL+ MY K G+
Sbjct: 444 GRCGEWVNRSAFACVLSTC-ADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGS 502

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           +E A   F+   +RD+VSWN+MI GYA+HG  K+ALEVF  MR+   + D IT +GV+ A
Sbjct: 503 MEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAA 562

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C+H+GLV++G  YF  M  +  +    EHY+CM+DL  RAG L++A++++  MPF   +T
Sbjct: 563 CSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDST 622

Query: 651 VWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           +W  +L A R+                L+P ++ +YVLLSN+YA++G W++  ++R +M+
Sbjct: 623 MWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMH 682

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           +R VKK  G+SWIEV+NK ++F  GD  HP+   IY+ LE+L  R+K AGY   T  VL 
Sbjct: 683 ERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVLH 742

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D+++E KE +L  HSE+LA+A+G++  P G P++++KNLRVC DCHT  K IS +E R I
Sbjct: 743 DVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRLI 802

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           ++RD+NRFHHF++G CSCGDYW
Sbjct: 803 ILRDSNRFHHFRDGSCSCGDYW 824



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/531 (23%), Positives = 219/531 (41%), Gaps = 116/531 (21%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL-----SSVLK 86
           + LF   P+R+   YN +L  Y  +    +AL+ F  I R     + + L     SS L 
Sbjct: 127 ERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLA 186

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVST----SLVDL-------------------- 122
               LFD +         VK   + +V +S+     LV L                    
Sbjct: 187 DVRALFDEM--------PVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGML 238

Query: 123 --YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ--------- 171
             Y+R   +++ R +FD   E + +SW +L++GY +    +   ++F++M          
Sbjct: 239 AAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNT 298

Query: 172 -VEG---------------IKP--NSFTFSTVLGVLADEGIVATAVQ------------- 200
            V G               + P  + FT++ ++   A  G++  A +             
Sbjct: 299 MVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSW 358

Query: 201 -------VHTMVIKNGGEVVTSV-------CNALISMYLKSKMVRDARAVFDGMEDRDSI 246
                  V   +++   E+  ++        N +++ Y ++ M+ +ARA+F  M  +D++
Sbjct: 359 NAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAV 418

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           +W +M+A Y       E  + F  MG  G  + RS F  V+  CA    L    QLHS++
Sbjct: 419 SWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRL 478

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +K G      +   L+  Y KCG ME+A   F  M E +DVVSW  MI+G+ ++G    A
Sbjct: 479 IKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEE-RDVVSWNTMIAGYARHGFGKEA 537

Query: 367 VNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPF-QVHAHIIKTNYEKSFSVGTA 418
           +  F  M +   +P+  T   +L A       +  +S F  +H         + +   T 
Sbjct: 538 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHY---TC 594

Query: 419 LLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +++   + G LDEA  +  ++  E D   W A+L          GA +I+R
Sbjct: 595 MIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL----------GASRIHR 635


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 282/839 (33%), Positives = 470/839 (56%), Gaps = 45/839 (5%)

Query: 37  RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
           RSP+     +  LL    R +L +EA+  ++ +  LG+        ++LK    L D   
Sbjct: 60  RSPEW----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115

Query: 97  GRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           G+Q+H    K G+  D V V+ +LV+LY +  +     +VFD ++E N VSW SL+S   
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD----EGIVATAVQVHTMVIKNGGE 211
             +  +  LE F  M  E ++P+SFT  +V+   ++    EG++    QVH   ++ G E
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKG-E 233

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           + + + N L++MY K   +  ++ +      RD +TWN++++    NE  +EA E    M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGK 330
            L G E    T  SV+  C+  + LR  ++LH+  LKNG +D +  + + L+  Y  C +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIIL 389
           +    ++F  M + K +  W AMI+G+ QN     A+  F  M    G+  N  T + ++
Sbjct: 354 VLSGRRVFDGMFDRK-IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412

Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A      F     +H  ++K   ++   V   L++ Y + G +D A ++F  ++++D+V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472

Query: 446 AWSAMLAGYAQIGDTEGAV-----------KIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
            W+ M+ GY      E A+           K+ +  +   +KPN  T  +++ +C A SA
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            + +GK+ HA +IK  L   + V SALV MY+K G ++ + +VF +  ++++++WN +I 
Sbjct: 533 -LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            Y  HG+ ++A+++ + M  Q ++ + +TFI V  AC+H+G+VDEG + F +M  ++ + 
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS-ATVWRTVLAACR------------- 660
           P+ +HY+C+VDL  RAG +++A  ++N MP   + A  W ++L A R             
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711

Query: 661 -LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
            LI L+P+ ++ YVLL+N+Y++ G W +   VR+ M ++ V+KE G SWIE  ++ + F+
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFV 771

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
           AGD SHPQS ++   LE L  R++  GY PDTS VL +++++ KE +L  HSE+LAIAFG
Sbjct: 772 AGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFG 831

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++ T  G  +++ KNLRVC DCH   K ISK+  R+I++RD  RFH FK G CSCGDYW
Sbjct: 832 ILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 282/839 (33%), Positives = 470/839 (56%), Gaps = 45/839 (5%)

Query: 37  RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
           RSP+     +  LL    R +L +EA+  ++ +  LG+        ++LK    L D   
Sbjct: 60  RSPEW----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115

Query: 97  GRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           G+Q+H    K G+  D V V+ +LV+LY +  +     +VFD ++E N VSW SL+S   
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD----EGIVATAVQVHTMVIKNGGE 211
             +  +  LE F  M  E ++P+SFT  +V+   ++    EG++    QVH   ++ G E
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKG-E 233

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           + + + N L++MY K   +  ++ +      RD +TWN++++    NE  +EA E    M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGK 330
            L G E    T  SV+  C+  + LR  ++LH+  LKNG +D +  + + L+  Y  C +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIIL 389
           +    ++F  M + K +  W AMI+G+ QN     A+  F  M    G+  N  T + ++
Sbjct: 354 VLSGRRVFDGMFDRK-IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412

Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A      F     +H  ++K   ++   V   L++ Y + G +D A ++F  ++++D+V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472

Query: 446 AWSAMLAGYAQIGDTEGAV-----------KIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
            W+ M+ GY      E A+           K+ +  +   +KPN  T  +++ +C A SA
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            + +GK+ HA +IK  L   + V SALV MY+K G ++ + +VF +  ++++++WN +I 
Sbjct: 533 -LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            Y  HG+ ++A+++ + M  Q ++ + +TFI V  AC+H+G+VDEG + F +M  ++ + 
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS-ATVWRTVLAACR------------- 660
           P+ +HY+C+VDL  RAG +++A  ++N MP   + A  W ++L A R             
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711

Query: 661 -LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
            LI L+P+ ++ YVLL+N+Y++ G W +   VR+ M ++ V+KE G SWIE  ++ + F+
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFV 771

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
           AGD SHPQS ++   LE L  R++  GY PDTS VL +++++ KE +L  HSE+LAIAFG
Sbjct: 772 AGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFG 831

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++ T  G  +++ KNLRVC DCH   K ISK+  R+I++RD  RFH FK G CSCGDYW
Sbjct: 832 ILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/770 (34%), Positives = 433/770 (56%), Gaps = 55/770 (7%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDMNESNVVSWTSLLSG 153
           G+ +H + + +G+  D  + T ++ LY R+  ++D    R++F++M E N+ +W +++  
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YAR         +F RM   G+ P++FTF++ L V           QVH+ +I  G +  
Sbjct: 150 YARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 209

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T V NALI MY K         VFD M +R+ +TWNS+++         +A   F  M  
Sbjct: 210 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 269

Query: 274 A--GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
           +  G +  + TF +++ LCA  +     RQ+H+ +++  I  +  + T L+  YS+CG++
Sbjct: 270 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRL 329

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A +IF+ M E ++  SW +MI G+ QNG    A+  F QM   G++P+ F+ S +L++
Sbjct: 330 NYAKEIFNRMAE-RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSS 388

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD--IV 445
             ++S  Q    +H  I++   E+   +   L++ Y K G +D A KV++   +KD    
Sbjct: 389 CVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTA 448

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+++LAGYA  G  + +   + ++    ++ +  T  +++N                  
Sbjct: 449 LWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL----------------- 491

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
                    L + +ALV MYSK G I  A  VF     +++VSWN+MI GY++HG +K+A
Sbjct: 492 ---------LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEA 542

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L +++EM ++ +  + +TF+ +++AC+H GLV+EG + F  M  +++I    EHY+CMVD
Sbjct: 543 LILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVD 602

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAI 671
           L  RAG LE A + + +MP     + W  +L AC              RL  L P +   
Sbjct: 603 LLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGP 662

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YV++SN+YAA G W+E   +R++M  + VKK+ G SWIE+ ++   F AG  +HP++ +I
Sbjct: 663 YVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEI 722

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDD---EHKEAILSQHSERLAIAFGLVATPAGAP 788
           Y+ L  L+ + K  GY PDTS++LQ++ D   E +E  L QHSERLA++ GL++ P  + 
Sbjct: 723 YNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKST 782

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +++ KNLR+CGDCHT  K ISK+  R I+ RDTNRFHHF+ G CSCGDYW
Sbjct: 783 IRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 282/536 (52%), Gaps = 38/536 (7%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   LF+  P+RN   +N ++  Y R   + EA  +F  + ++G+     T +S L+
Sbjct: 127 YARK---LFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALR 183

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            CG L     G+QVH + +  GF  D  V  +L+D+Y + ++ E   +VFD+M E N V+
Sbjct: 184 VCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVT 243

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQ--VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           W S++S  A+    +  L LF RMQ   +GI+P+ FTF+T+L + A++       Q+H  
Sbjct: 244 WNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAH 303

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           +I+        V   L+ MY +   +  A+ +F+ M +R++ +WNSM+ GY  N    EA
Sbjct: 304 LIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEA 363

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F  M L G +    +  S++  C +  + +  R+LH+ +++N ++ +  ++  L+  
Sbjct: 364 LRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDM 423

Query: 325 YSKCGKMEDASKIFSM-MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
           Y+KCG M+ A K++   +++ ++   W ++++G+   G    + N F +M    +  +  
Sbjct: 424 YAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVL 483

Query: 384 TYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           T   I+                         + TAL++ Y K G + +A  VF+ ++ K+
Sbjct: 484 TMVTIVNL---------------------LVLETALVDMYSKCGAITKARTVFDNMNGKN 522

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           IV+W+AM++GY++ G ++ A+ +Y ++  +G+ PNE TF ++++AC+  +  VE+G +  
Sbjct: 523 IVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSH-TGLVEEGLRIF 581

Query: 504 AC-----SIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMI 553
                  +I+AK  +  C    +V +  + G +E A E V K   + ++ +W +++
Sbjct: 582 TSMQEDYNIEAKAEHYTC----MVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 633



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 265/506 (52%), Gaps = 31/506 (6%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---AR 234
           N   +S+++    D         +HT +I NG      +   ++ +Y +S  + D   AR
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            +F+ M +R+   WN+M+  Y   + +MEA+  F+ M   G      TF S +++C   +
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALR 189

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
                +Q+HS+++  G   D  +   L+  Y+KC   E   K+F  M E ++ V+W ++I
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE-RNQVTWNSII 248

Query: 355 SGHLQNGAIDLAVNFFCQM--TREGVRPNGFTYSIILT----AQPAVSPFQVHAHIIKTN 408
           S   Q G  + A+  F +M  + +G++P+ FT++ +LT     +      Q+HAH+I+ N
Sbjct: 249 SAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 308

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
             K+  V T L++ Y + G L+ A ++F  + E++  +W++M+ GY Q G+T+ A+++++
Sbjct: 309 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 368

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+   G+KP+ F+ SS++++C + S + ++G++ H   ++  +     +   LV MY+K 
Sbjct: 369 QMQLNGIKPDCFSLSSMLSSCVSLSDS-QKGRELHNFIVRNTMEEEGILQVVLVDMYAKC 427

Query: 529 GNIESASEVFKR--QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           G+++ A +V+ +  ++ R+   WNS++ GYA  G  K++   F EM   D+E+D +T + 
Sbjct: 428 GSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVT 487

Query: 587 VITAC----------THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++             +  G + + +  FD M  ++ +      ++ M+  YS+ G  ++A
Sbjct: 488 IVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIV-----SWNAMISGYSKHGCSKEA 542

Query: 637 MDIINRMP---FAASATVWRTVLAAC 659
           + +   MP      +   +  +L+AC
Sbjct: 543 LILYEEMPKKGMYPNEVTFLAILSAC 568


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/744 (34%), Positives = 429/744 (57%), Gaps = 20/744 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD  P+R+ V +N L+  Y  +  H++ +++FL + R+G     +T + VLK+C  L
Sbjct: 128 QKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSL 187

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            DH  G Q+H   VK GF  DV   ++L+D+Y +   ++   + F  M E N VSW++++
Sbjct: 188 EDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAII 247

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G  +N      LELF  MQ  G+  +  TF++V    A    +    Q+H   +K    
Sbjct: 248 AGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFG 307

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  A + MY+K   + DA+ +F+ + + +  ++N+++ GY  ++  +EA   F  +
Sbjct: 308 TDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLL 367

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G  L   +     + CA  K      Q+H   +K+    +  +   ++  Y KCG +
Sbjct: 368 QKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL 427

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A  +F  M   +D VSW A+I+ H QNG  +  ++ F  M + G+ P+ FTY  +L A
Sbjct: 428 VEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKA 486

Query: 392 ----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
               Q      ++H  IIK+       VG AL++ Y K G++++A K+ + + E+ +V+W
Sbjct: 487 CAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSW 546

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +A+++G++    +E A K + ++   GV P+ FT++++++ C A    VE GKQ HA  I
Sbjct: 547 NAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC-ANLVTVELGKQIHAQII 605

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K +L +   +SS LV MYSK GN++    +F++   RD V+WN+M+CGYAQHG  ++AL+
Sbjct: 606 KKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALK 665

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F+ M+ ++++ +  TF+ V+ AC H GLV++G  YF  M++ + + P +EHYSC+VD+ 
Sbjct: 666 IFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIM 725

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            R+G + KA+++I  MPF A A +WRT+L+ C+              ++ L+P DSA YV
Sbjct: 726 GRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYV 785

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LLSN+YA  G W E  ++RK+M    +KKE G SWIE+K++ ++FL GD +HP+S +IY 
Sbjct: 786 LLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYE 845

Query: 734 KLEELSTRLKDAGYKPDTSYVLQD 757
            L+ L+  +K  GY PDT ++L D
Sbjct: 846 NLDVLTDEMKWVGYMPDTDFILND 869



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 170/608 (27%), Positives = 299/608 (49%), Gaps = 44/608 (7%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE---- 130
           P    T S + + C        G+Q H   + + F   V V+  L+ +Y++ +++E    
Sbjct: 39  PTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFK 98

Query: 131 --DG-------------------------RRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
             DG                         +++FD M E +VVSW SL+SGY  N  + +V
Sbjct: 99  VFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKV 158

Query: 164 LELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           +++F +M   G   +  TF+ VL     L D G     +Q+H + +K G +      +AL
Sbjct: 159 IDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHG---GGIQIHGLAVKMGFDCDVVTGSAL 215

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           + MY K K +  +   F  M +++ ++W++++AG V N+      E F  M  AG  +++
Sbjct: 216 LDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQ 275

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           STF SV + CA    LRL  QLH   LK     D  I T  +  Y KC  + DA K+F+ 
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----S 396
           +    ++ S+ A+I G+ ++     A+  F  + + G+  +  + S    A   +     
Sbjct: 336 LPN-HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE 394

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             QVH   +K+  + +  V  A+L+ Y K G L EA  VFE +  +D V+W+A++A + Q
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G+ E  + ++  +   G++P+EFT+ SV+ AC A   A+  G + H   IK++L     
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC-AGWQALNCGMEIHNRIIKSRLGLDSF 513

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V  AL+ MYSK G +E A ++  R  ++ +VSWN++I G++    +++A + F +M    
Sbjct: 514 VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMG 573

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++ D  T+  ++  C +   V+ G+Q    ++ +  +       S +VD+YS+ G ++  
Sbjct: 574 VDPDNFTYATILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQDF 632

Query: 637 MDIINRMP 644
             I  + P
Sbjct: 633 QLIFEKAP 640



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 256/518 (49%), Gaps = 43/518 (8%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TFS +    +D   +    Q H  +I    +    V N LI MY+K   +  A  VFDGM
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 241 EDRDSITWNSM-------------------------------VAGYVTNELHMEAFETFN 269
             RD+++WN+M                               ++GY+ N  H +  + F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            MG  G    R+TF  V+K C++ ++     Q+H   +K G D D    + L+  Y+KC 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           K++ + + F  M E K+ VSW+A+I+G +QN  +   +  F +M + GV  +  T++ + 
Sbjct: 224 KLDCSIQFFHSMPE-KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            +   +S      Q+H H +KT++     +GTA L+ Y+K   L +A K+F  +   ++ 
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +++A++ GYA+      A+ ++R L   G+  +E + S    AC      +E G Q H  
Sbjct: 343 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE-GLQVHGL 401

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           S+K+   + +CV++A++ MY K G +  A  VF+    RD VSWN++I  + Q+G+ +K 
Sbjct: 402 SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKT 461

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L +F  M +  +E D  T+  V+ AC     ++ G +  + ++       +    + ++D
Sbjct: 462 LSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIA-LID 520

Query: 626 LYSRAGMLEKAMDIINRMPFAASATV--WRTVLAACRL 661
           +YS+ GM+EKA  + +R+   A  TV  W  +++   L
Sbjct: 521 MYSKCGMMEKAEKLHDRL---AEQTVVSWNAIISGFSL 555



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 118/227 (51%), Gaps = 2/227 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + L DR  ++  V +N ++  +      +EA   F  +  +G+     T +++L TC
Sbjct: 529 EKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC 588

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G+Q+H + +K     D  +S++LVD+Y +  N++D + +F+     + V+W 
Sbjct: 589 ANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWN 648

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           +++ GYA++ + +  L++F  MQ+E +KPN  TF  VL      G+V   +   H+M+  
Sbjct: 649 AMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSN 708

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
            G +      + ++ +  +S  V  A  + +GM  + D++ W ++++
Sbjct: 709 YGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 755


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/829 (32%), Positives = 447/829 (53%), Gaps = 31/829 (3%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            +FD    R+ + +N  +  Y  +  H  A++LF  +   G  +   T+ SVL  C  L  
Sbjct: 255  VFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314

Query: 94   HVFGRQVHCECVKSGFARDVN---------VSTSLVDLYMRTNNVEDGRRVFDDM-NESN 143
             + G+ VH   +KSG   D+          + + LV +Y++  ++   RRVFD M ++ N
Sbjct: 315  ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374

Query: 144  VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
            V  W  ++ GYA+    +  L LF +M   GI P+    S +L  +         +  H 
Sbjct: 375  VHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHG 434

Query: 204  MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
             ++K G     +VCNALIS Y KS M+ +A  VFD M  +D+I+WNS+++G  +N L+ E
Sbjct: 435  YLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSE 494

Query: 264  AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
            A E F  M + G EL  +T +SV+  CA +    + R +H   +K G+  + ++   L+ 
Sbjct: 495  AIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLD 554

Query: 324  AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
             YS C      ++IF  M + K+VVSWTAMI+ + + G  D       +M  +G++P+ F
Sbjct: 555  MYSNCSDWHSTNQIFRNMAQ-KNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVF 613

Query: 384  TYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
              + +L         +    VH + I+   EK   V  AL+  YV    ++EA  VF+ +
Sbjct: 614  AVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHV 673

Query: 440  DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
              KDI++W+ ++ GY++      +  ++  +  +  KPN  T + ++ A  A  +++E+G
Sbjct: 674  TNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPA-VASISSLERG 731

Query: 500  KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
            ++ HA +++         S+ALV MY K G +  A  +F R  K++L+SW  MI GY  H
Sbjct: 732  REIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMH 791

Query: 560  GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
            G  K A+ +F++MR   +E D  +F  ++ AC H+GL  EG ++F+ M  E+ I P ++H
Sbjct: 792  GCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKH 851

Query: 620  YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQ 665
            Y+C+VDL S  G L++A + I  MP    +++W ++L  CR+                L+
Sbjct: 852  YTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLE 911

Query: 666  PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
            P ++  YVLL+N+YA    W+   +++  +  R +++  G SWIEV+ K + F+A + +H
Sbjct: 912  PENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNH 971

Query: 726  PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
            P+ N+I   L+ ++ R+++ G+ P   Y L   +D   +  L  HS +LA+ FG++  P 
Sbjct: 972  PEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPE 1031

Query: 786  GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
            G P+++ KN +VC  CH   K ISK+  R+I++RD++RFHHF+ G CSC
Sbjct: 1032 GRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 300/632 (47%), Gaps = 32/632 (5%)

Query: 34  LFDRSPQR--NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +FD  P R  +   +  L+  Y +    QE ++LF  ++  G+      +S VLK    L
Sbjct: 152 VFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASL 211

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G  +H    K G      V+ +L+ LY R   +ED  +VFD M+  + +SW S +
Sbjct: 212 GSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTI 271

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-- 209
           SGY  N  +DR ++LF +M  EG + +S T  +VL   A+ G       VH   +K+G  
Sbjct: 272 SGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLL 331

Query: 210 -------GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI-TWNSMVAGYVTN--- 258
                    +  ++ + L+ MY+K   +  AR VFD M  + ++  WN ++ GY      
Sbjct: 332 WDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEF 391

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           E  +  FE  + +G+   E   S  +  I   +  ++  +A   H  ++K G      + 
Sbjct: 392 EESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVA---HGYLVKLGFGTQCAVC 448

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y+K   +++A  +F  M   +D +SW ++ISG   NG    A+  F +M  +G 
Sbjct: 449 NALISFYAKSNMIDNAVLVFDRMPH-QDTISWNSVISGCTSNGLNSEAIELFVRMWMQGH 507

Query: 379 RPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
             +  T   +L+  PA +          VH + +KT      S+  ALL+ Y        
Sbjct: 508 ELDSTT---LLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHS 564

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
             ++F  + +K++V+W+AM+  Y + G  +    + +++  +G+KP+ F  +SV++   A
Sbjct: 565 TNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHG-FA 623

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
              +++QGK  H  +I+  +   L V++AL+ MY    N+E A  VF     +D++SWN+
Sbjct: 624 GDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNT 683

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +I GY+++    ++  +F +M  Q  + + +T   ++ A      ++ G++     +   
Sbjct: 684 LIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRG 742

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            +  +    + +VD+Y + G L  A  + +R+
Sbjct: 743 FLEDSYTS-NALVDMYVKCGALLVARVLFDRL 773



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 252/496 (50%), Gaps = 20/496 (4%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNE--SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           LV  Y++  ++   R VFD+M    ++V  WTSL+S YA+       + LF +MQ  G+ 
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P++   S VL  +A  G +     +H ++ K G     +V NALI++Y +   + DA  V
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD M  RD+I+WNS ++GY +N  H  A + F+ M   G E++  T +SV+  CA     
Sbjct: 256 FDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFE 315

Query: 297 RLARQLHSQVLKNGIDFD-HNIRTG--------LMVAYSKCGKMEDASKIFSMMREMKDV 347
            + + +H   +K+G+ +D  ++++G        L+  Y KCG M  A ++F  M    +V
Sbjct: 316 LVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNV 375

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHAH 403
             W  ++ G+ +    + ++  F QM   G+ P+    S +L     +S        H +
Sbjct: 376 HVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGY 435

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           ++K  +    +V  AL++ Y K  ++D A  VF+ +  +D ++W+++++G    G    A
Sbjct: 436 LVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEA 495

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           ++++ ++  +G + +  T  SV+ AC A S     G+  H  S+K  L     +++AL+ 
Sbjct: 496 IELFVRMWMQGHELDSTTLLSVLPAC-ARSHYWFVGRVVHGYSVKTGLIGETSLANALLD 554

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MYS   +  S +++F+   ++++VSW +MI  Y + G   K   + +EM    ++ D   
Sbjct: 555 MYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPD--- 611

Query: 584 FIGVITACTHAGLVDE 599
            +  +T+  H    DE
Sbjct: 612 -VFAVTSVLHGFAGDE 626



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 227/513 (44%), Gaps = 55/513 (10%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA-LISMYLKSKMVRDARAVFDG 239
           ++  V+ +  +E  +  A + H +V    G ++ SV    L+  YLK   +  AR VFD 
Sbjct: 96  SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDE 155

Query: 240 MEDR--DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           M  R  D   W S+++ Y       E    F  M   G          V+K  A+   + 
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
               +H  + K G+     +   L+  YS+CG MEDA ++F  M   +D +SW + ISG+
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHA-RDAISWNSTISGY 274

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYE 410
             NG  D AV+ F +M  EG   +  T   +L+  PA +          VH + +K+   
Sbjct: 275 FSNGWHDRAVDLFSKMWSEGTEISSVT---VLSVLPACAELGFELVGKVVHGYSMKSGLL 331

Query: 411 KSF---------SVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDT 460
                       ++G+ L+  YVK G +  A +VF+ +  K ++  W+ ++ GYA+  + 
Sbjct: 332 WDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEF 391

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           E ++ ++ Q+   G+ P+E   S ++   T  S A   G   H   +K        V +A
Sbjct: 392 EESLLLFEQMHELGITPDEHALSCLLKCITCLSCA-RDGLVAHGYLVKLGFGTQCAVCNA 450

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L++ Y+K   I++A  VF R   +D +SWNS+I G   +G   +A+E+F  M  Q  E D
Sbjct: 451 LISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELD 510

Query: 581 GITFIGVITACTHA----------------GLVDE---GQQYFDIMVN------EHHIYP 615
             T + V+ AC  +                GL+ E        D+  N       + I+ 
Sbjct: 511 STTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFR 570

Query: 616 TMEH-----YSCMVDLYSRAGMLEKAMDIINRM 643
            M       ++ M+  Y+RAG+ +K   ++  M
Sbjct: 571 NMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEM 603


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/593 (39%), Positives = 386/593 (65%), Gaps = 22/593 (3%)

Query: 266  ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
            E    MG+ G E+    + SV+  C +   +R  +++H+ ++K   +    +RT L+V Y
Sbjct: 463  EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522

Query: 326  SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            +KC  + DA ++   M E ++VVSWTAMISG+ Q G    A++ F +M   G  PN FT+
Sbjct: 523  NKCRCLGDARRVLDEMPE-RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTF 581

Query: 386  SIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
            + +LT+  + S FQ    +H+ +IKT++E    VG++LL+ Y K G + EA +VF+ + E
Sbjct: 582  ATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 641

Query: 442  KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            +D+V+ +A+++GYAQ+G  E A+ ++R+L  EG++ N  T++SV+ A +   AA++ G+Q
Sbjct: 642  RDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSG-LAALDHGRQ 700

Query: 502  FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
             H+  ++AKL   + + ++L+ MYSK G++  +  +F    +R ++SWN+M+ GY++HG 
Sbjct: 701  VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 760

Query: 562  TKKALEVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY-PTMEH 619
             ++A+E+FK M+ ++ ++ D +TF+ V++ C+H G+ D G + F  MVN+   + P +EH
Sbjct: 761  GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 820

Query: 620  YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
            Y C+VDL+ RAG +E+A + I +MPF  +A +W ++L ACR              L+ ++
Sbjct: 821  YGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIE 880

Query: 666  PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
              ++  YV+LSN+YA+ G W +   VR+LM ++ V KE G SWIE+    ++F A D SH
Sbjct: 881  SENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSH 940

Query: 726  PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
            P+  ++++K+ ELS ++K+AGY P+ S VL D+DDE KE IL  HSE+LA+AFGL+ TP 
Sbjct: 941  PRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPG 1000

Query: 786  GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G P++I+KNLR+C DCH   K +S++  R++ +RD NRFHH   G CSCGDYW
Sbjct: 1001 GTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 232/492 (47%), Gaps = 56/492 (11%)

Query: 7   LKSLINPQTKQPPKSLRSPFYSKKD--QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALN 64
           + SLI  + KQ   S+ +PF  ++    +    SP    +  NR L         +EAL 
Sbjct: 416 ITSLIFHRPKQVLSSISNPFSRQRILLSTFPANSPDLKTLCSNRQL---------KEAL- 465

Query: 65  LFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYM 124
           L +GI+ L +   G    SVL  C        G++VH   +K+ +   V + T L+ LY 
Sbjct: 466 LEMGIQGLEVEFQG--YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYN 523

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           +   + D RRV D+M E NVVSWT+++SGY++       L LF  M + G  PN FTF+T
Sbjct: 524 KCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFAT 583

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           VL             Q+H++VIK   E    V ++L+ MY K+  + +AR VFDG+ +RD
Sbjct: 584 VLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERD 643

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++  ++++GY    L  EA + F  +   G      T+ SV+   +    L   RQ+HS
Sbjct: 644 VVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHS 703

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            VL+  + F   ++  L+  YSKCG +  + +IF  M E + V+SW AM+ G+ ++G   
Sbjct: 704 HVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE-RTVISWNAMLVGYSKHGLGR 762

Query: 365 LAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAY 423
            AV  F  M  E  V+P+  T+                                A+L+  
Sbjct: 763 EAVELFKLMKEENKVKPDSVTF-------------------------------LAVLSGC 791

Query: 424 VKKGILDEAAKVF-ELIDEKD-----IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
              G+ D   ++F E++++KD     I  +  ++  + + G  E A +  +++  E   P
Sbjct: 792 SHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFE---P 848

Query: 478 NEFTFSSVINAC 489
               + S++ AC
Sbjct: 849 TAAIWGSLLGAC 860



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 12/173 (6%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVL 85
           YS++   +FD  P+R  + +N +L  Y +  L +EA+ LF  ++        S T  +VL
Sbjct: 732 YSRR---IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 788

Query: 86  KTC--GCLFDHVFGRQVHCECV--KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN- 140
             C  G + D   G ++  E V  K GF  ++     +VDL+ R   VE+       M  
Sbjct: 789 SGCSHGGMEDR--GLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPF 846

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           E     W SLL G  R   N  + E   R  +E    N+  +  +  + A  G
Sbjct: 847 EPTAAIWGSLL-GACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 898


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/787 (33%), Positives = 423/787 (53%), Gaps = 69/787 (8%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQVH +    G   ++ V+  L+  Y     ++D   +FD M   + VSW+ ++ G+A+ 
Sbjct: 98  RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 157

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                    F  +   G +P+++T   V+    D              +KN       + 
Sbjct: 158 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRD--------------LKN-------LQ 196

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            AL+ MY+K + + DAR +FD M++RD +TW  M+ GY       E+   F  M   G  
Sbjct: 197 MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             +   V+V+  CA    +  AR +   + +     D  + T ++  Y+KCG +E A +I
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QP 393
           F  M E K+V+SW+AMI+ +  +G    A++ F  M   G+ P+  T + +L A    + 
Sbjct: 317 FDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRN 375

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                QVHA        ++  V   L++ Y     LD+A  +F+ +  +D V+WS M+ G
Sbjct: 376 LTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 435

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFS----------------------------SV 485
           +A++GD       +R+L   G +P+ +T                              +V
Sbjct: 436 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTV 495

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + AC A   A+ + +       + K    + + +A++ M++K G +ESA E+F R  +++
Sbjct: 496 VFAC-AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN 554

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           ++SW++MI  Y  HG  +KAL++F  M R  +  + IT + ++ AC+HAGLV+EG ++F 
Sbjct: 555 VISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFS 614

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----- 660
           +M  ++ +   ++HY+C+VDL  RAG L++A+ +I  M       +W   L ACR     
Sbjct: 615 LMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDV 674

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    L+ LQP +   Y+LLSN+YA  G W++ A+ R LM+ R++KK  G++WIEV
Sbjct: 675 VLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEV 734

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
            NK++ F  GD +HP+S +IY  L+ L  +L+  GY PDT++VL D+D+E K  IL  HS
Sbjct: 735 DNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHS 794

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+LAIAFGL+ATP   P++I+KNLRVCGDCHT  KL+S +  R I+VRD NRFHHFKEG 
Sbjct: 795 EKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGA 854

Query: 832 CSCGDYW 838
           CSCGDYW
Sbjct: 855 CSCGDYW 861



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 202/455 (44%), Gaps = 37/455 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+  +R+ V +  ++  Y       E+L LF  +R  G+      + +V+  C  L  
Sbjct: 215 LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 274

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
               R +     +  F  DV + T+++D+Y +   VE  R +FD M E NV+SW+++++ 
Sbjct: 275 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 334

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  +    + L+LF  M   G+ P+  T +++L    +   +    QVH     +G    
Sbjct: 335 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQN 394

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N L+  Y   + + DA  +FDGM  RDS++W+ MV G+     +M  F TF  +  
Sbjct: 395 LIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIR 454

Query: 274 AGAELTRSTF----------------------------VSVIKLCATTKELRLARQLHSQ 305
            GA     T                             V+V+  CA    +  AR +   
Sbjct: 455 CGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 514

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           + +     D  + T ++  ++KCG +E A +IF  M E K+V+SW+AMI+ +  +G    
Sbjct: 515 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE-KNVISWSAMIAAYGYHGQGRK 573

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG------TAL 419
           A++ F  M R G+ PN  T   +L A       +         +E  +SV       T +
Sbjct: 574 ALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE-DYSVRADVKHYTCV 632

Query: 420 LNAYVKKGILDEAAKVFE-LIDEKDIVAWSAMLAG 453
           ++   + G LDEA K+ E +  EKD   W A L  
Sbjct: 633 VDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 162/316 (51%), Gaps = 22/316 (6%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L    ++S +  C   + L   RQ+H+Q   +G+  +  +   L+  YS    ++DA  +
Sbjct: 79  LNPKFYISALVNC---RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGL 135

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M  ++D VSW+ M+ G  + G        F ++ R G RP+ +T   ++ A   +  
Sbjct: 136 FDGMC-VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 194

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            Q+                 AL++ YVK   +++A  +F+ + E+D+V W+ M+ GYA+ 
Sbjct: 195 LQM-----------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 237

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G    ++ ++ ++  EGV P++    +V+ AC A   A+ + +       + K    + +
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFAC-AKLGAMHKARIIDDYIQRKKFQLDVIL 296

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            +A++ MY+K G +ESA E+F R  +++++SW++MI  Y  HG  +KAL++F+ M    +
Sbjct: 297 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGM 356

Query: 578 EFDGITFIGVITACTH 593
             D IT   ++ AC +
Sbjct: 357 LPDKITLASLLYACIN 372



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 24/276 (8%)

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           F  S ++  +      QVHA        ++  V   L+  Y     LD+A  +F+ +  +
Sbjct: 83  FYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 142

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D V+WS M+ G+A++GD       +R+L   G +P+ +T   VI AC             
Sbjct: 143 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACR------------ 190

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
                   L N   +  ALV MY K   IE A  +F + ++RDLV+W  MI GYA+ G  
Sbjct: 191 -------DLKN---LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKA 240

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            ++L +F++MR + +  D +  + V+ AC   G + +  +  D  +        +   + 
Sbjct: 241 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILGTA 299

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           M+D+Y++ G +E A +I +RM    +   W  ++AA
Sbjct: 300 MIDMYAKCGCVESAREIFDRME-EKNVISWSAMIAA 334



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 165/365 (45%), Gaps = 51/365 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR  ++N + ++ ++  Y      ++AL+LF  +   G+     TL+S+L  C   
Sbjct: 314 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINC 373

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +    RQVH +    G  +++ V+  LV  Y     ++D   +FD M   + VSW+ ++
Sbjct: 374 RNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 433

Query: 152 SGYAR--NKMN--------------------------DRVLELFHRMQVEGIKPNSFTFS 183
            G+A+  + MN                          +  L LF +M+ EG+ P+     
Sbjct: 434 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMV 493

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
           TV+   A  G +  A  +   + +   ++   +  A+I M+ K   V  AR +FD ME++
Sbjct: 494 TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 553

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           + I+W++M+A Y  +    +A + F  M  +G    + T VS++  C+           H
Sbjct: 554 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS-----------H 602

Query: 304 SQVLKNGIDF------DHNIR------TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
           + +++ G+ F      D+++R      T ++    + G++++A K+   M   KD   W 
Sbjct: 603 AGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWG 662

Query: 352 AMISG 356
           A +  
Sbjct: 663 AFLGA 667


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 268/711 (37%), Positives = 413/711 (58%), Gaps = 54/711 (7%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P +F  + +L   A  G +A A +V   +      + T   NAL+S    S++V D   +
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMPDP--NLFTR--NALLSALAHSRLVPDMERL 101

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKE 295
           F  M +RD++++N+++ G+ +      + + +  +        TR T  ++I + +   +
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM----------- 344
             L   +H QVL+ G      + + L+  Y+K G + DA ++F  M              
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221

Query: 345 -------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
                              +D ++WT M++G  QNG    A++ F +M  EGV  + +T+
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             ILTA  A++      Q+HA+I +T YE +  VG+AL++ Y K   +  A  VF  +  
Sbjct: 282 GSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           ++I++W+AM+ GY Q   +E AV+ + ++  +G+KP++FT  SVI++C A  A++E+G Q
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC-ANLASLEEGAQ 400

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
           FH  ++ + L   + VS+ALVT+Y K G+IE A  +F      D VSW +++ GYAQ G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
            K+ +++F++M    L+ DG+TFIGV++AC+ AGLV++G  YFD M  +H I P  +HY+
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYT 520

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPH 667
           CM+DLYSR+G  ++A + I +MP +  A  W T+L++CRL              +   P 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           + A YVLL +M+AA G W E A +R+ M DR+VKKE G SWI+ KNK + F A D SHP 
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 640

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
           S++IY KLE L++++ + GYKPD S VL D+ D  K  ++S HSE+LAIAFGL+  P   
Sbjct: 641 SSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEM 700

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P++IVKNLRVC DCH   K ISK+  RDI+VRD  RFH F +G CSCGD+W
Sbjct: 701 PIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 242/526 (46%), Gaps = 76/526 (14%)

Query: 100 VHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV-------------- 144
           VHC  +K+   A    +   L+  Y ++  +   RRVFD+M + N+              
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 145 -----------------VSWTSLLSGYARNKMNDRVLELFHR-MQVEGIKPNSFTFSTVL 186
                            VS+ +L++G++      R ++L+   ++ E ++P   T S ++
Sbjct: 94  LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 187 GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME----- 241
            V +     A    VH  V++ G      V + L+ MY K  ++RDAR VF  ME     
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213

Query: 242 --------------------------DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
                                     DRDSITW +MV G   N L +EA + F  M   G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
             + + TF S++  C         +Q+H+ + +   + +  + + L+  YSKC  +  A 
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F  M   ++++SWTAMI G+ QN   + AV  F +M  +G++P+ FT   ++++   +
Sbjct: 334 AVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +      Q H   + +   +  +V  AL+  Y K G +++A ++F+ +   D V+W+A++
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            GYAQ G  +  + ++ ++   G+KP+  TF  V++AC+  +  VE+G  +       K 
Sbjct: 453 TGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSR-AGLVEKGCDYF--DSMQKD 509

Query: 512 NNALCVS---SALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMI 553
           ++ + +    + ++ +YS+ G  + A E  K+     D   W +++
Sbjct: 510 HDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 208/468 (44%), Gaps = 39/468 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGC 90
           + LF   P+R+ V YN L+  +        ++ L+  + R   +     TLS+++     
Sbjct: 99  ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV----- 145
           L D   G  VHC+ ++ GF     V + LVD+Y +   + D RRVF +M    VV     
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218

Query: 146 --------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
                                     +WT++++G  +N +    L++F RM+ EG+  + 
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           +TF ++L             Q+H  + +   E    V +AL+ MY K + +R A AVF  
Sbjct: 279 YTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRR 338

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  R+ I+W +M+ GY  N    EA   F+ M + G +    T  SVI  CA    L   
Sbjct: 339 MTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG 398

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            Q H   L +G+     +   L+  Y KCG +EDA ++F  M    D VSWTA+++G+ Q
Sbjct: 399 AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVTGYAQ 457

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG--- 416
            G     ++ F +M   G++P+G T+  +L+A       +       +  +    V    
Sbjct: 458 FGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDD 517

Query: 417 --TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
             T +++ Y + G   EA + + ++    D   W+ +L+     G+ E
Sbjct: 518 HYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 167/347 (48%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF     R+ + +  ++    ++ L  EAL++F  +R  G+ +   T  S+L  CG L
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H    ++ +  +V V ++LVD+Y +  ++     VF  M   N++SWT+++
Sbjct: 292 AASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMI 351

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY +N  ++  +  F  MQ++GIKP+ FT  +V+   A+   +    Q H + + +G  
Sbjct: 352 VGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 411

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V NAL+++Y K   + DA  +FD M   D ++W ++V GY       E  + F  M
Sbjct: 412 RYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNI------RT 319
            + G +    TF+ V+  C+            + +++ G D+      DH+I       T
Sbjct: 472 LVNGLKPDGVTFIGVLSACS-----------RAGLVEKGCDYFDSMQKDHDIVPIDDHYT 520

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            ++  YS+ G+ ++A +    M    D   W  ++S     G +++ 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/764 (34%), Positives = 432/764 (56%), Gaps = 76/764 (9%)

Query: 95  VFGRQVHCECVKSGF----ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            + R+  CE   S F     R      +++  Y+  N  +  R+VF+ M + +++SW  +
Sbjct: 69  AYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVM 128

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNG 209
           LSGY +N        LF++M  + +     +++ +L   A  G V  A ++   M++KN 
Sbjct: 129 LSGYVKNGNLSAARALFNQMPEKDV----VSWNAMLSGFAQNGFVEEARKIFDQMLVKN- 183

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E+     N L+S Y+++  + DAR +FD   D + ++WN ++ GYV             
Sbjct: 184 -EIS---WNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRK----------- 228

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKC 328
                                   K L  AR L  ++ +++ I +  NI   ++  Y++ 
Sbjct: 229 ------------------------KRLDDARSLFDRMPVRDKISW--NI---MITGYAQN 259

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G + +A ++F  +  ++DV +WTAM+SG +QNG +D A   F +M  +    N  +++ +
Sbjct: 260 GLLSEARRLFEEL-PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAM 314

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
           +         +    +      ++ S    ++  Y + G +D+A  +F+ + ++D ++W+
Sbjct: 315 IAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWA 374

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM++GYAQ G +E A+ ++ ++  +G   N    +  +++C A  AA+E GKQ H   +K
Sbjct: 375 AMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC-AEIAALELGKQLHGRLVK 433

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           A         +AL+ MY K G+IE A +VF+   ++D+VSWN+MI GYA+HG  K+AL +
Sbjct: 434 AGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALAL 493

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M+   ++ D +T +GV++AC+H G VD+G +YF+ M   + I    +HY+CM+DL  
Sbjct: 494 FESMK-MTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLG 552

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           RAG L++A++++  MPF   A  W  +L A R+                ++P +S +YVL
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVL 612

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YAA+G W+E   +R  M D+ VKK  GYSW+E++NKT+ F  GD SHP++ +IY+ 
Sbjct: 613 LSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAY 672

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           LEEL   LK  G+   T  VL D+++E KE +L  HSE+LA+AFG+++ P G P++++KN
Sbjct: 673 LEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKN 732

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCH  IK ISK+ +R I+VRD+NRFHHF EG CSCGDYW
Sbjct: 733 LRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 278/575 (48%), Gaps = 75/575 (13%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V++NR +  Y R    + AL++F G+RR     + + +S      G L ++ F     
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMIS------GYLSNNKF----- 107

Query: 102 CECVKSGFA----RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
            +C +  F     RD+     ++  Y++  N+   R +F+ M E +VVSW ++LSG+A+N
Sbjct: 108 -DCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQN 166

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              +   ++F +M V+    N  +++ +L      G +  A ++     K   E+V+  C
Sbjct: 167 GFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRLFDS--KMDWEIVSWNC 220

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA- 276
             L+  Y++ K + DAR++FD M  RD I+WN M+ GY  N L  EA   F  + +    
Sbjct: 221 --LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVF 278

Query: 277 ----------------ELTR----------STFVSVIKLCATTKELRLARQLHSQVLKNG 310
                           E TR           ++ ++I     ++++  AR+L  Q+    
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRN 338

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
               + + TG    Y++CG ++ A  +F  M + +D +SW AMISG+ Q+G  + A++ F
Sbjct: 339 TSSWNTMVTG----YAQCGNIDQAKILFDEMPQ-RDCISWAAMISGYAQSGQSEEALHLF 393

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M R+G   N    +  L++   ++      Q+H  ++K  ++  +  G ALL  Y K 
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC 453

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G ++EA  VFE I EKDIV+W+ M+AGYA+ G  + A+ ++  +    +KP++ T   V+
Sbjct: 454 GSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVL 512

Query: 487 NACTAPSAAVEQGKQ-----FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           +AC+  +  V++G +     +    I A   +  C    ++ +  + G ++ A  + K  
Sbjct: 513 SACS-HTGFVDKGMEYFNSMYQNYGITANAKHYTC----MIDLLGRAGRLDEALNLMKSM 567

Query: 542 R-KRDLVSWNSMICGYAQHGHT---KKALEVFKEM 572
               D  +W +++     HG T   +KA E   EM
Sbjct: 568 PFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 205/495 (41%), Gaps = 80/495 (16%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV-----LK 86
           + +F++ P R+ + +N +L  Y ++     A  LF  +    +  + + LS       ++
Sbjct: 111 RKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               +FD +    V  E   +G          L+  Y++   +ED RR+FD   +  +VS
Sbjct: 171 EARKIFDQML---VKNEISWNG----------LLSAYVQNGRIEDARRLFDSKMDWEIVS 217

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVE----------GIKPNS----------------- 179
           W  L+ GY R K  D    LF RM V           G   N                  
Sbjct: 218 WNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV 277

Query: 180 FTFSTVLGVLADEGIVATAVQ--------------------VHTMVIKNGGEVV------ 213
           F ++ ++      G++  A +                    V +  I+   E+       
Sbjct: 278 FAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR 337

Query: 214 -TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            TS  N +++ Y +   +  A+ +FD M  RD I+W +M++GY  +    EA   F  M 
Sbjct: 338 NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMK 397

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G  L RS     +  CA    L L +QLH +++K G    +     L+  Y KCG +E
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIE 457

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
           +A  +F  + E KD+VSW  MI+G+ ++G    A+  F  M +  ++P+  T   +L+A 
Sbjct: 458 EAFDVFEDITE-KDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSAC 515

Query: 392 --QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKDIVA 446
                V     + + +  NY  + +    T +++   + G LDEA  + + +    D   
Sbjct: 516 SHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAAT 575

Query: 447 WSAMLAGYAQIGDTE 461
           W A+L      GDTE
Sbjct: 576 WGALLGASRIHGDTE 590



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 163/314 (51%), Gaps = 25/314 (7%)

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
           D+V W   IS +++ G  + A++ F  M R        TY+ +++   + + F     + 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRST----VTYNAMISGYLSNNKFDCARKVF 114

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           +   ++       +L+ YVK G L  A  +F  + EKD+V+W+AML+G+AQ G  E A K
Sbjct: 115 EKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARK 174

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI-KAKLNNALCVSSALVTM 524
           I+ Q+    +  NE +++ ++      SA V+ G+   A  +  +K++  +   + L+  
Sbjct: 175 IFDQM----LVKNEISWNGLL------SAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGG 224

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y +K  ++ A  +F R   RD +SWN MI GYAQ+G   +A  +F+E+  +D+      +
Sbjct: 225 YVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FAW 280

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             +++     G++DE  + F+ M  ++ +      ++ M+  Y ++  +EKA ++ ++MP
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEV-----SWNAMIAGYVQSQQIEKARELFDQMP 335

Query: 645 FAASATVWRTVLAA 658
            + + + W T++  
Sbjct: 336 -SRNTSSWNTMVTG 348



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 10/283 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  PQR+ + +  ++  Y +    +EAL+LF+ ++R G  L  S L+  L +C  +  
Sbjct: 361 LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   VK+GF        +L+ +Y +  ++E+   VF+D+ E ++VSW ++++G
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YAR+      L LF  M++  IKP+  T   VL   +  G V   ++    + +N G   
Sbjct: 481 YARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITA 539

Query: 214 TSV-CNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG---YVTNELHMEAFETF 268
            +     +I +  ++  + +A  +   M    D+ TW +++     +   EL  +A E  
Sbjct: 540 NAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKV 599

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
             M    + +    +V +  L A +   R  R++ S++   G+
Sbjct: 600 FEMEPDNSGM----YVLLSNLYAASGRWREVREMRSKMRDKGV 638



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 111/207 (53%), Gaps = 20/207 (9%)

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           I + DIV W+  ++ Y + G  E A+ ++  +     + +  T++++I      S  +  
Sbjct: 55  IVDSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMI------SGYLSN 104

Query: 499 GKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            K   A  +  K+ +   +S + +++ Y K GN+ +A  +F +  ++D+VSWN+M+ G+A
Sbjct: 105 NKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFA 164

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           Q+G  ++A ++F +M    L  + I++ G+++A    G +++ ++ FD  ++   +    
Sbjct: 165 QNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIV---- 216

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMP 644
             ++C++  Y R   L+ A  + +RMP
Sbjct: 217 -SWNCLMGGYVRKKRLDDARSLFDRMP 242


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/645 (40%), Positives = 386/645 (59%), Gaps = 27/645 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NA+I+ Y K      A  +FD + + D +++N++++ Y        A   F+ M   G +
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T  +VI  C    ++ L  QLHS  + +G D   ++   L+  Y K G ++DA ++
Sbjct: 138 MDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QP 393
           F  M  ++D VSW +MI  + Q+     A+  F +M R G+  + FT + +LTA    + 
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLA 452
                Q H  +IKT + ++  VG+ L++ Y K  G + +  KVFE I E D+V W+ M++
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315

Query: 453 GYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           GY+Q  +  E A++ +RQ+   G +PN+ +F  VI+AC+  S+   QGKQ H+ ++K+ +
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP-SQGKQIHSLALKSDI 374

Query: 512 -NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            +N + V +AL+ MYSK GN++ A  +F R  + + VS NSMI GYAQHG   ++L +F+
Sbjct: 375 PSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQ 434

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M  + +    ITFI V++AC H G V+EG  YF++M  + +I P  EHYSCM+DL  RA
Sbjct: 435 WMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRA 494

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLS 676
           G L +A ++I RMPF   +  W ++L ACR              ++ L+P ++A YV+LS
Sbjct: 495 GKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLS 554

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           NMYA+ G W+E A VRK M DR VKK+ G SWIEVK + + F+A D SHP   +IY  LE
Sbjct: 555 NMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLE 614

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDE---HKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           E+S ++K AGY PD  + L   D      KE  L  HSE+LA+AFGL++T  G P+ +VK
Sbjct: 615 EMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVK 674

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLR+CGDCH  IK IS +  R+I VRD +RFH FKEG CSCGDYW
Sbjct: 675 NLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 254/525 (48%), Gaps = 45/525 (8%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +LKTC    D   G+ +H   +KS        S   + LY +   +   R+ F D+++ N
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 144 VVSWTSLLSGYAR-------NKMNDRVLE------------------------LFHRMQV 172
           V S+ ++++ YA+       +++ D++ E                        LF  M+ 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G+  + FT S V+    D+  V    Q+H++ + +G +   SV NAL++ Y K+  + D
Sbjct: 134 MGLDMDXFTLSAVITACCDD--VGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191

Query: 233 ARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           A+ VF GM   RD ++WNSM+  Y  ++   +A   F  M   G  +   T  SV+    
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKMEDASKIFSMMREMKDVVSW 350
             ++L    Q H Q++K G   + ++ +GL+  YSKC G M D  K+F  + E  D+V W
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE-PDLVLW 310

Query: 351 TAMISGHLQNGA-IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
             M+SG+ QN   ++ A+  F QM   G RPN  ++  +++A   +S      Q+H+  +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 406 KTNYEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           K++   +  SV  AL+  Y K G L +A ++F+ + E + V+ ++M+AGYAQ G    ++
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVT 523
            +++ +    + P   TF SV++AC A +  VE+G   F+    K  +       S ++ 
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSAC-AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489

Query: 524 MYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALE 567
           +  + G +  A  +  R       + W S++     HG+ + A++
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVK 534



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 218/447 (48%), Gaps = 13/447 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+ P+ + V YN L+  Y        AL LF G+R +GL +   TLS+V+  C C   
Sbjct: 96  LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITAC-CDDV 154

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSLLS 152
            + G Q+H   V SGF   V+V+ +L+  Y +  +++D +RVF  M    + VSW S++ 
Sbjct: 155 GLIG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIV 213

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            Y +++   + L LF  M   G+  + FT ++VL        ++  +Q H  +IK G   
Sbjct: 214 AYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQ 273

Query: 213 VTSVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME-AFETFNN 270
            + V + LI +Y K    + D R VF+ + + D + WN+MV+GY  NE  +E A E F  
Sbjct: 274 NSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQ 333

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSKCG 329
           M   G      +FV VI  C+        +Q+HS  LK+ I  +  ++   L+  YSKCG
Sbjct: 334 MQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCG 393

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++DA ++F  M E  + VS  +MI+G+ Q+G    +++ F  M    + P   T+  +L
Sbjct: 394 NLQDARRLFDRMAE-HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452

Query: 390 TAQPAVSPFQVHAHII-----KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKD 443
           +A       +   +       K N E      + +++   + G L EA  +   +     
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            + W+++L      G+ E AVK   Q+
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQV 539



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 187/400 (46%), Gaps = 36/400 (9%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   F  ++K C   ++L   + LHS  +K+ I          ++ YSKCG++  A K F
Sbjct: 7   TLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAF 66

Query: 339 SMMREMK------------------------------DVVSWTAMISGHLQNGAIDLAVN 368
             + +                                D+VS+  +IS +   G    A+ 
Sbjct: 67  QDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALG 126

Query: 369 FFCQMTREGVRPNGFTYSIILTA--QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            F  M   G+  + FT S ++TA         Q+H+  + + ++   SV  ALL  Y K 
Sbjct: 127 LFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 427 GILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
           G LD+A +VF  +   +D V+W++M+  Y Q  +   A+ +++++   G+  + FT +SV
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK-KGNIESASEVFKRQRKR 544
           + A T     +  G QFH   IK   +    V S L+ +YSK  G +    +VF+   + 
Sbjct: 247 LTAFTCLE-DLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305

Query: 545 DLVSWNSMICGYAQHGH-TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           DLV WN+M+ GY+Q+    + ALE F++M+      +  +F+ VI+AC++     +G+Q 
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
             + +        +   + ++ +YS+ G L+ A  + +RM
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 2/176 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCR-DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +F+   + + V +N ++  Y + +   ++AL  F  ++ +G      +   V+  C  
Sbjct: 296 RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSN 355

Query: 91  LFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           L     G+Q+H   +KS    + ++V  +L+ +Y +  N++D RR+FD M E N VS  S
Sbjct: 356 LSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNS 415

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +++GYA++ +    L LF  M    I P S TF +VL   A  G V        M+
Sbjct: 416 MIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 235/588 (39%), Positives = 385/588 (65%), Gaps = 22/588 (3%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           MG+ G E+    + SV+  C +   +R  +++H+ ++K   +    +RT L+V Y+KC  
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           + DA ++   M E ++VVSWTAMISG+ Q G    A++ F +M   G  PN FT++ +LT
Sbjct: 61  LGDARRVLDEMPE-RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 119

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +  + S FQ    +H+ +IKT++E    VG++LL+ Y K G + EA +VF+ + E+D+V+
Sbjct: 120 SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 179

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            +A+++GYAQ+G  E A+ ++R+L  EG++ N  T++SV+ A +   AA++ G+Q H+  
Sbjct: 180 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSG-LAALDHGRQVHSHV 238

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           ++AKL   + + ++L+ MYSK G++  +  +F    +R ++SWN+M+ GY++HG  ++A+
Sbjct: 239 LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 298

Query: 567 EVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY-PTMEHYSCMV 624
           E+FK M+ ++ ++ D +TF+ V++ C+H G+ D G + F  MVN+   + P +EHY C+V
Sbjct: 299 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 358

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           DL+ RAG +E+A + I +MPF  +A +W ++L ACR              L+ ++  ++ 
Sbjct: 359 DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAG 418

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YV+LSN+YA+ G W +   VR+LM ++ V KE G SWIE+    ++F A D SHP+  +
Sbjct: 419 NYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEE 478

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           +++K+ ELS ++K+AGY P+ S VL D+DDE KE IL  HSE+LA+AFGL+ TP G P++
Sbjct: 479 VFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVR 538

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           I+KNLR+C DCH   K +S++  R++ +RD NRFHH   G CSCGDYW
Sbjct: 539 IIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 195/400 (48%), Gaps = 42/400 (10%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH   +K+ +   V + T L+ LY +   + D RRV D+M E NVVSWT+++SGY++
Sbjct: 29  GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQ 88

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  L LF  M + G  PN FTF+TVL             Q+H++VIK   E    V
Sbjct: 89  RGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFV 148

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY K+  + +AR VFDG+ +RD ++  ++++GY    L  EA + F  +   G 
Sbjct: 149 GSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 208

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                T+ SV+   +    L   RQ+HS VL+  + F   ++  L+  YSKCG +  + +
Sbjct: 209 RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRR 268

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAV 395
           IF  M E + V+SW AM+ G+ ++G    AV  F  M  E  V+P+  T+          
Sbjct: 269 IFDSMPE-RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTF---------- 317

Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKD-----IVAWSA 449
                                 A+L+     G+ D   ++F E++++KD     I  +  
Sbjct: 318 ---------------------LAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGC 356

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           ++  + + G  E A +  +++  E   P    + S++ AC
Sbjct: 357 VVDLFGRAGRVEEAFEFIKKMPFE---PTAAIWGSLLGAC 393



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 177/349 (50%), Gaps = 11/349 (3%)

Query: 17  QPPKSLRSPF---YSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG 68
           +PP  LR+     Y+K       + + D  P+RN V +  ++  Y +     EAL+LF+ 
Sbjct: 42  EPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVE 101

Query: 69  IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN 128
           +   G      T ++VL +C        GRQ+H   +K+ F   + V +SL+D+Y +   
Sbjct: 102 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK 161

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           + + RRVFD + E +VVS T+++SGYA+  +++  L+LF R+Q EG++ N  T+++VL  
Sbjct: 162 ICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTA 221

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
           L+    +    QVH+ V++        + N+LI MY K   +  +R +FD M +R  I+W
Sbjct: 222 LSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 281

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVL 307
           N+M+ GY  + L  EA E F  M         S TF++V+  C+         ++  +++
Sbjct: 282 NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMV 341

Query: 308 KNGIDFDHNIR-TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
                F+  I   G +V  + + G++E+A +    M        W +++
Sbjct: 342 NQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 390



 Score = 45.8 bits (107), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 12/173 (6%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVL 85
           YS++   +FD  P+R  + +N +L  Y +  L +EA+ LF  ++        S T  +VL
Sbjct: 265 YSRR---IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVL 321

Query: 86  KTC--GCLFDHVFGRQVHCECV--KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN- 140
             C  G + D   G ++  E V  K GF  ++     +VDL+ R   VE+       M  
Sbjct: 322 SGCSHGGMEDR--GLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPF 379

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           E     W SLL G  R   N  + E   R  +E    N+  +  +  + A  G
Sbjct: 380 EPTAAIWGSLL-GACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 431


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/751 (34%), Positives = 437/751 (58%), Gaps = 23/751 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           QSLFD  P+R+ V +N LL  Y  + ++++++ +F+ +R L +P   +T + +LK C  +
Sbjct: 92  QSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGI 151

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D+  G QVHC  ++ GF  DV   ++LVD+Y +   ++D  RVF +M E N+V W++++
Sbjct: 152 EDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVI 211

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +N      L+LF  M   G+  +  T+++V    A         Q+H   +K+   
Sbjct: 212 AGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFA 271

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             + +  A + MY K + + DA  VF+ + +    ++N+++ GY   +  ++A + F ++
Sbjct: 272 YDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSL 331

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                     +    +  C+  K      QLH   +K G+ F+  +   ++  Y KCG +
Sbjct: 332 QRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGAL 391

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A  IF  M E +D VSW A+I+ H QN  I   ++ F  M R  + P+ FTY  ++ A
Sbjct: 392 MEACLIFEEM-ERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450

Query: 392 ---QPAVS-PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              Q A++   ++H  IIK+     + VG+AL++ Y K G+L EA K+   ++EK  V+W
Sbjct: 451 CAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSW 510

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +++++G++    +E A + + Q+   G+ P+ +T+++V++ C A  A +E GKQ HA  +
Sbjct: 511 NSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVC-ANMATIELGKQIHAQIL 569

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K +L++ + ++S LV MYSK GN++ +  +F++  KRD V+W++MIC YA HG  +KA+ 
Sbjct: 570 KLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAIN 629

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F+EM+  +++ +   FI V+ AC H G VD+G  YF  M++ + + P MEHYSCMVDL 
Sbjct: 630 LFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLL 689

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            R+G + +A+ +I  MPF A   +WRT+L+ C+              L+ L P DS+ YV
Sbjct: 690 GRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYV 749

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LL+N+YA  G W E A++R +M + K+KKE G SWIEV+++ ++FL GD +HP+S +IY 
Sbjct: 750 LLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYE 809

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           +   L   +K AGY PD  ++L   D+E +E
Sbjct: 810 QTHLLVDEMKWAGYVPDIDFML---DEEMEE 837



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/614 (27%), Positives = 298/614 (48%), Gaps = 39/614 (6%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN------------ 127
           T S +L+ C  L     G+QVH + + +GF   + V+  L+  Y +++            
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 128 -------------------NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
                              N+   + +FD M E +VVSW SLLS Y  N +N + +E+F 
Sbjct: 68  PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           RM+   I  +  TF+ +L   +        +QVH + I+ G E      +AL+ MY K K
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            + DA  VF  M +R+ + W++++AGYV N+  +E  + F +M   G  +++ST+ SV +
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            CA     +L  QLH   LK+   +D  I T  +  Y+KC +M DA K+F+ +       
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPN-PPRQ 306

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHI 404
           S+ A+I G+ +      A++ F  + R  +  +  + S  LTA   +       Q+H   
Sbjct: 307 SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLA 366

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K     +  V   +L+ Y K G L EA  +FE ++ +D V+W+A++A + Q  +    +
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++  +    ++P++FT+ SV+ AC A   A+  G + H   IK+ +     V SALV M
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKAC-AGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDM 485

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K G +  A ++  R  ++  VSWNS+I G++    ++ A   F +M    +  D  T+
Sbjct: 486 YGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTY 545

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             V+  C +   ++ G+Q     + +  ++  +   S +VD+YS+ G ++ +  +  + P
Sbjct: 546 ATVLDVCANMATIELGKQ-IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP 604

Query: 645 FAASATVWRTVLAA 658
                T W  ++ A
Sbjct: 605 KRDYVT-WSAMICA 617



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 42/215 (19%)

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           + TFS ++  C+   A +  GKQ H   I       + V++ L+  Y K   +  A +VF
Sbjct: 6   KLTFSHILQKCSNLKA-LNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVF 64

Query: 539 KRQRKRDLVSWNSMICGYA-------------------------------QHGHTKKALE 567
            R  +RD++SWN++I GYA                                +G  +K++E
Sbjct: 65  DRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSCM 623
           +F  MR   +  D  TF  ++ AC+  G+ D G     + V+   I    E+     S +
Sbjct: 125 IFVRMRSLKIPHDYATFAVILKACS--GIEDYG---LGLQVHCLAIQMGFENDVVTGSAL 179

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           VD+YS+   L+ A  +   MP   +   W  V+A 
Sbjct: 180 VDMYSKCKKLDDAFRVFREMP-ERNLVCWSAVIAG 213


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/645 (40%), Positives = 386/645 (59%), Gaps = 27/645 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NA+I+ Y K      A  +FD + + D +++N++++ Y        A   F+ M   G +
Sbjct: 78  NAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLD 137

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T  +VI  C    ++ L  QLHS  + +G D   ++   L+  Y K G ++DA ++
Sbjct: 138 MDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QP 393
           F  M  ++D VSW +MI  + Q+     A+  F +M R G+  + FT + +LTA    + 
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLA 452
                Q H  +IKT + ++  VG+ L++ Y K  G + +  KVFE I E D+V W+ M++
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315

Query: 453 GYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           GY+Q  +  E A++ +RQ+   G +PN+ +F  VI+AC+  S+   QGKQ H+ ++K+ +
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP-SQGKQIHSLALKSDI 374

Query: 512 -NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            +N + V +AL+ MYSK GN++ A  +F R  + + VS NSMI GYAQHG   ++L +F+
Sbjct: 375 PSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQ 434

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M  + +    ITFI V++AC H G V+EG  YF++M  + +I P  EHYSCM+DL  RA
Sbjct: 435 WMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRA 494

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLS 676
           G L +A ++I RMPF   +  W ++L ACR              ++ L+P ++A YV+LS
Sbjct: 495 GKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLS 554

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           NMYA+ G W+E A VRK M DR VKK+ G SWIEVK + + F+A D SHP   +IY  LE
Sbjct: 555 NMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLE 614

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDE---HKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           E+S ++K AGY PD  + L   D      KE  L  HSE+LA+AFGL++T  G P+ +VK
Sbjct: 615 EMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVK 674

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLR+CGDCH  IK IS +  R+I VRD +RFH FKEG CSCGDYW
Sbjct: 675 NLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 254/525 (48%), Gaps = 45/525 (8%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +LKTC    D   G+ +H   +KS        S   + LY +   +   R+ F D+++ N
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 144 VVSWTSLLSGYAR-------NKMNDRVLE------------------------LFHRMQV 172
           V S+ ++++ YA+       +++ D++ E                        LF  M+ 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G+  + FT S V+    D+  V    Q+H++ + +G +   SV NAL++ Y K+  + D
Sbjct: 134 MGLDMDGFTLSAVITACCDD--VGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191

Query: 233 ARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           A+ VF GM   RD ++WNSM+  Y  ++   +A   F  M   G  +   T  SV+    
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKMEDASKIFSMMREMKDVVSW 350
             ++L    Q H Q++K G   + ++ +GL+  YSKC G M D  K+F  + E  D+V W
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITE-PDLVLW 310

Query: 351 TAMISGHLQNGA-IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
             M+SG+ QN   ++ A+  F QM   G RPN  ++  +++A   +S      Q+H+  +
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 406 KTNYEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           K++   +  SV  AL+  Y K G L +A ++F+ + E + V+ ++M+AGYAQ G    ++
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVT 523
            +++ +    + P   TF SV++AC A +  VE+G   F+    K  +       S ++ 
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSAC-AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489

Query: 524 MYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALE 567
           +  + G +  A  +  R       + W S++     HG+ + A++
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVK 534



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 219/447 (48%), Gaps = 13/447 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+ P+ + V YN L+  Y        AL LF G+R +GL + G TLS+V+  C C   
Sbjct: 96  LFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITAC-CDDV 154

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSLLS 152
            + G Q+H   V SGF   V+V+ +L+  Y +  +++D +RVF  M    + VSW S++ 
Sbjct: 155 GLIG-QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIV 213

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            Y +++   + L LF  M   G+  + FT ++VL        ++  +Q H  +IK G   
Sbjct: 214 AYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQ 273

Query: 213 VTSVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME-AFETFNN 270
            + V + LI +Y K    + D R VF+ + + D + WN+MV+GY  NE  +E A E F  
Sbjct: 274 NSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQ 333

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSKCG 329
           M   G      +FV VI  C+        +Q+HS  LK+ I  +  ++   L+  YSKCG
Sbjct: 334 MQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCG 393

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++DA ++F  M E  + VS  +MI+G+ Q+G    +++ F  M    + P   T+  +L
Sbjct: 394 NLQDARRLFDRMAE-HNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVL 452

Query: 390 TAQPAVSPFQVHAHII-----KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKD 443
           +A       +   +       K N E      + +++   + G L EA  +   +     
Sbjct: 453 SACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPG 512

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            + W+++L      G+ E AVK   Q+
Sbjct: 513 SIGWASLLGACRTHGNIELAVKAANQV 539



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 188/400 (47%), Gaps = 36/400 (9%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   F  ++K C   ++L   + LHS  +K+ I          ++ YSKCG++  A K F
Sbjct: 7   TLQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAF 66

Query: 339 SMMREMK------------------------------DVVSWTAMISGHLQNGAIDLAVN 368
             + +                                D+VS+  +IS +   G    A+ 
Sbjct: 67  QDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALG 126

Query: 369 FFCQMTREGVRPNGFTYSIILTA--QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            F  M   G+  +GFT S ++TA         Q+H+  + + ++   SV  ALL  Y K 
Sbjct: 127 LFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKN 186

Query: 427 GILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
           G LD+A +VF  +   +D V+W++M+  Y Q  +   A+ +++++   G+  + FT +SV
Sbjct: 187 GDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK-KGNIESASEVFKRQRKR 544
           + A T     +  G QFH   IK   +    V S L+ +YSK  G +    +VF+   + 
Sbjct: 247 LTAFTCLE-DLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP 305

Query: 545 DLVSWNSMICGYAQHGH-TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           DLV WN+M+ GY+Q+    + ALE F++M+      +  +F+ VI+AC++     +G+Q 
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
             + +        +   + ++ +YS+ G L+ A  + +RM
Sbjct: 366 HSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRM 405



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 2/176 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCR-DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +F+   + + V +N ++  Y + +   ++AL  F  ++ +G      +   V+  C  
Sbjct: 296 RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSN 355

Query: 91  LFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           L     G+Q+H   +KS    + ++V  +L+ +Y +  N++D RR+FD M E N VS  S
Sbjct: 356 LSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNS 415

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +++GYA++ +    L LF  M    I P S TF +VL   A  G V        M+
Sbjct: 416 MIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 284/812 (34%), Positives = 437/812 (53%), Gaps = 25/812 (3%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           N L+ E C     ++AL     ++ L + +   T  ++L+ C        G +VH    K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           +     V +  +L+ +++R  ++ +   VF  M E ++ SW  L+ GYA+    D  L L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           +HRM   GI+P+ +TF  VL        +A   +VH  VI+ G E    V NALI+MY+K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              +  AR VFD M  RD I+WN+M++GY  N++ +E    F  M     +    T  SV
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           I  C    + RL R++H  V+K G   + ++   L+  +S  G  ++A  +FS M E KD
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM-EFKD 361

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHA 402
           +VSWTAMISG+ +NG  + AV  +  M  EGV P+  T + +L+A   +        +H 
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE 421

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
              +T       V  +L++ Y K   +D+A +VF  I  K++++W++++ G      +  
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFE 481

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+  ++Q+    +KPN  T  SV++AC A   A+  GK+ HA +++  L     + +AL+
Sbjct: 482 ALFFFQQMILS-LKPNSVTLVSVLSAC-ARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY + G +E A   F    K D+ SWN ++ GYAQ G    A+E+F +M   D+  D I
Sbjct: 540 DMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEI 598

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           TF  ++ AC+ +G+V +G +YF+ M ++ HI P ++HY+ +VDL  RAG LE A + I +
Sbjct: 599 TFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKK 658

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MP      +W  +L ACR              +  +       Y+LL N+YA +G W E 
Sbjct: 659 MPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEV 718

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
           ARVRK+M + ++  + G SW+EV  + ++FL GD  HPQ  +I + LE    +++  G  
Sbjct: 719 ARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLS 778

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
                   DID    E I   HSERLAIAFGL+ T  G P+ + KNL +C +CH  +K I
Sbjct: 779 MSKDSRRDDIDASKAE-IFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFI 837

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGD--YW 838
           SK+ RR I VRDT +FHHFK+G+CSCGD  YW
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 259/525 (49%), Gaps = 8/525 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F +  +R+   +N L+  Y +     EALNL+  +  +G+     T   VL+TCG L D
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR+VH   ++ GF  DV+V  +L+ +Y++  ++   R VFD M   + +SW +++SG
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISG 270

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N +    L LF  M+   + P+  T ++V+      G      +VH  VIK G    
Sbjct: 271 YFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            SV N+LI M+       +A  VF  ME +D ++W +M++GY  N L  +A ET+  M  
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G      T  SV+  CA    L     LH    + G+     +   L+  YSKC  ++ 
Sbjct: 391 EGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDK 450

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  +   K+V+SWT++I G   N     A+ FF QM    ++PN  T   +L+A  
Sbjct: 451 ALEVFHRIPN-KNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACA 508

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +       ++HAH ++T       +  ALL+ YV+ G ++ A   F    EKD+ +W+ 
Sbjct: 509 RIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNI 567

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +L GYAQ G    AV+++ ++    V P+E TF+S++ AC+      +  + F +   K 
Sbjct: 568 LLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKF 627

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
            +   L   +++V +  + G +E A E  K+     D   W +++
Sbjct: 628 HIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/752 (36%), Positives = 422/752 (56%), Gaps = 22/752 (2%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +K+GF  +    T ++ L+ +  +  +  RVF+ +     V +  +L GYA+N      L
Sbjct: 71  IKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDAL 130

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
             F RM  + ++     ++ +L +  +   +    ++H ++I NG E    V  A++S+Y
Sbjct: 131 CFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLY 190

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
            K + + +A  +F+ M+ +D ++W ++VAGY  N     A +    M  AG +    T V
Sbjct: 191 AKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLV 250

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           S++   A  K LR+ R +H    ++G +   N+   L+  Y KCG    A  +F  MR  
Sbjct: 251 SILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRS- 309

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----V 400
           K VVSW  MI G  QNG  + A   F +M  EG  P   T   +L A   +   +    V
Sbjct: 310 KTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFV 369

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  + K   + + SV  +L++ Y K   +D AA +F  + EK  V W+AM+ GYAQ G  
Sbjct: 370 HKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCV 428

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           + A+ ++  + S+G+K + FT   VI A  A  +   Q K  H  +++A ++N + VS+A
Sbjct: 429 KEALNLFCMMQSQGIKLDCFTLVGVITA-LADFSVNRQAKWIHGLAVRACMDNNVFVSTA 487

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LV MY+K G I++A ++F   ++R +++WN+MI GY  HG  K+ L++F EM++  ++ +
Sbjct: 488 LVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPN 547

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITF+ VI+AC+H+G V+EG   F  M  ++++ PTM+HYS MVDL  RAG L+ A + I
Sbjct: 548 DITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFI 607

Query: 641 NRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQ 686
             MP     +V   +L AC              +L  L P +   +VLL+N+YA+   W 
Sbjct: 608 QEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWD 667

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + A+VR  M D+ + K  G SW+E++N+ ++F +G  +HP+S +IY+ LE L   +K AG
Sbjct: 668 KVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAG 727

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PD   +  D++++ K+ +LS HSERLAIAFGL+ T  G  L I KNLRVCGDCH   K
Sbjct: 728 YVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTK 786

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IS +  R+I+VRD  RFHHFK G CSCGDYW
Sbjct: 787 YISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 276/520 (53%), Gaps = 9/520 (1%)

Query: 21  SLRSPFYSKKDQS-LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           SL   F S  + + +F+    +  V Y+ +L  Y ++S   +AL  FL +    + L   
Sbjct: 87  SLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVG 146

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
             + +L+ CG   D   GR++H   + +GF  ++ V T+++ LY +   +++  ++F+ M
Sbjct: 147 DYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERM 206

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              ++VSWT+L++GYA+N    R L+L  +MQ  G KP+S T  ++L  +AD   +    
Sbjct: 207 QHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGR 266

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +H    ++G E + +V NAL+ MY K    R AR VF GM  +  ++WN+M+ G   N 
Sbjct: 267 SIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNG 326

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EAF TF  M   G   TR T + V+  CA   +L     +H  + K  +D + ++  
Sbjct: 327 ESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMN 386

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YSKC +++ A+ IF+ +   K  V+W AMI G+ QNG +  A+N FC M  +G++
Sbjct: 387 SLISMYSKCKRVDIAASIFNNLE--KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIK 444

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            + FT   ++TA    S  +    +H   ++   + +  V TAL++ Y K G +  A K+
Sbjct: 445 LDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKL 504

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+++ E+ ++ W+AM+ GY   G  +  + ++ ++    VKPN+ TF SVI+AC+  S  
Sbjct: 505 FDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACS-HSGF 563

Query: 496 VEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           VE+G   F +      L   +   SA+V +  + G ++ A
Sbjct: 564 VEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDA 603



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 214/437 (48%), Gaps = 6/437 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+R   ++ V +  L+  Y ++   + AL L L ++  G      TL S+L     +  
Sbjct: 202 MFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKA 261

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR +H    +SGF   VNV+ +L+D+Y +  +    R VF  M    VVSW +++ G
Sbjct: 262 LRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDG 321

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            A+N  ++     F +M  EG  P   T   VL   A+ G +     VH ++ K   +  
Sbjct: 322 CAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSN 381

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            SV N+LISMY K K V  A ++F+ +E + ++TWN+M+ GY  N    EA   F  M  
Sbjct: 382 VSVMNSLISMYSKCKRVDIAASIFNNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQS 440

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +L   T V VI   A     R A+ +H   ++  +D +  + T L+  Y+KCG ++ 
Sbjct: 441 QGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKT 500

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K+F MM+E + V++W AMI G+  +G     ++ F +M +  V+PN  T+  +++A  
Sbjct: 501 ARKLFDMMQE-RHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACS 559

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                +    + K+  E  +   T  ++ Y    ++D   +  +L D  + +    +  G
Sbjct: 560 HSGFVEEGLLLFKSMQEDYYLEPT--MDHY--SAMVDLLGRAGQLDDAWNFIQEMPIKPG 615

Query: 454 YAQIGDTEGAVKIYRQL 470
            + +G   GA KI++ +
Sbjct: 616 ISVLGAMLGACKIHKNV 632



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 196/368 (53%), Gaps = 10/368 (2%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           R   V +++ C + KEL    Q+   ++KNG   +H  +T ++  + K G   +A+++F 
Sbjct: 47  RHPSVVLLENCTSKKELY---QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFE 103

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF- 398
            + E+K  V +  M+ G+ +N ++  A+ FF +M  + VR     Y+ +L          
Sbjct: 104 HV-ELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLK 162

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              ++H  II   +E +  V TA+++ Y K   +D A K+FE +  KD+V+W+ ++AGYA
Sbjct: 163 KGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYA 222

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G  + A+++  Q+   G KP+  T  S++ A  A   A+  G+  H  + ++   + +
Sbjct: 223 QNGHAKRALQLVLQMQEAGQKPDSVTLVSILPA-VADMKALRIGRSIHGYAFRSGFESLV 281

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V++AL+ MY K G+   A  VFK  R + +VSWN+MI G AQ+G +++A   F +M  +
Sbjct: 282 NVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDE 341

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
                 +T +GV+ AC + G ++ G  +   ++++  +   +   + ++ +YS+   ++ 
Sbjct: 342 GEVPTRVTMMGVLLACANLGDLERG-WFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDI 400

Query: 636 AMDIINRM 643
           A  I N +
Sbjct: 401 AASIFNNL 408



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 135/270 (50%), Gaps = 19/270 (7%)

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           +Q+   IIK  +       T +++ + K G   EAA+VFE ++ K  V +  ML GYA+ 
Sbjct: 64  YQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKN 123

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
                A+  + ++  + V+     ++ ++  C   +  +++G++ H   I     + L V
Sbjct: 124 SSLGDALCFFLRMMCDEVRLVVGDYACLLQLC-GENLDLKKGREIHGLIITNGFESNLFV 182

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            +A++++Y+K   I++A ++F+R + +DLVSW +++ GYAQ+GH K+AL++  +M+    
Sbjct: 183 MTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQ 242

Query: 578 EFDGITFIGVITACTHAGLVDEGQQY--------FDIMVNEHHIYPTMEHYSCMVDLYSR 629
           + D +T + ++ A      +  G+          F+ +VN           + ++D+Y +
Sbjct: 243 KPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNV---------TNALLDMYFK 293

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAAC 659
            G    A  +   M  + +   W T++  C
Sbjct: 294 CGSARIARLVFKGMR-SKTVVSWNTMIDGC 322


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/655 (39%), Positives = 393/655 (60%), Gaps = 32/655 (4%)

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +KN  E +    N+++ MY K   + DAR VFD M +R+ ++WN++++ Y  N +  + F
Sbjct: 40  VKNPPEFLE---NSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGF 96

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F+NM     +   ST++  ++       L + +Q+HS  +++G+  + ++ T +   Y
Sbjct: 97  CMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMY 156

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            KCG +E A  +F  M E K+ V+WT ++ G+ Q      A+  F +M  EGV  + + +
Sbjct: 157 VKCGWLEGAELVFEKMSE-KNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVF 215

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           SI+L A   +       Q+H HI+K   E   SVGT L++ YVK   L+ A K FE I E
Sbjct: 216 SIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISE 275

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            + V+WSA++ GY Q+G+ E A+K +  L +  V  N FT++S+  AC+A  A    G Q
Sbjct: 276 PNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSAL-ADFNSGAQ 334

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            HA +IK+ L       SA++TMYS+ G ++ A+ VF+     D V+W ++I GYA  G+
Sbjct: 335 AHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGN 394

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
             +AL++F+ M+   +  + +TFI V+TAC+H+GLV EG+QY + M + + +  T++HY 
Sbjct: 395 APEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYD 454

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPH 667
           CMVD+YSRAG L++A+++I  MPF+  A  W+ +L  C               L  L P 
Sbjct: 455 CMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPE 514

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           D+A Y+L+ N+YA+ G W+E A VRK+M +R ++KE   SWI VK K + F+ GD  HPQ
Sbjct: 515 DTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQ 574

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVL-QDIDD---EHKEAILSQHSERLAIAFGLVAT 783
           + +IYSKLE L+    D+  K +T  +  +D+ +   E KE +L  HSERLA+AFGL++T
Sbjct: 575 TEEIYSKLEALN----DSVIKEETGLLTEEDVSNSLPERKEQLLV-HSERLALAFGLIST 629

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P+ AP+ + KNLR C DCH   K +S +  R+IVVRD+ RFHHFK G CSC DYW
Sbjct: 630 PSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/491 (30%), Positives = 256/491 (52%), Gaps = 12/491 (2%)

Query: 73  GLPLFGSTLSSVLKTCG---CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
           G+ +   +   + + CG    LFD   GR  H +  ++       +  S++ +Y +  ++
Sbjct: 5   GISVSPRSYKCLFEACGKIKSLFD---GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSL 61

Query: 130 EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL 189
            D R+VFD+M E N+VSW +++S YA N + D+   +F  M     KPN  T+   L  L
Sbjct: 62  ADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSL 121

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
            +   +    Q+H+  I++G     SV  A+ +MY+K   +  A  VF+ M +++++ W 
Sbjct: 122 LNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWT 181

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
            ++ GY   E  M+A   F  M   G EL    F  V+K CA  +EL   RQ+H  ++K 
Sbjct: 182 GIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKL 241

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           G++ + ++ T L+  Y KC  +E A+K F  + E  D VSW+A+I+G+ Q G  + A+  
Sbjct: 242 GLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPND-VSWSALITGYCQMGEFEEALKT 300

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F  +    V  N FTY+ I  A  A++ F    Q HA  IK++        +A++  Y +
Sbjct: 301 FESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSR 360

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G LD A +VFE ID+ D VAW+A++AGYA  G+   A+K++R++   GV+PN  TF +V
Sbjct: 361 CGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAV 420

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KR 544
           + AC+     +E  +   + S    +   +     +V +YS+ G ++ A E+ +      
Sbjct: 421 LTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSP 480

Query: 545 DLVSWNSMICG 555
           D +SW  ++ G
Sbjct: 481 DAMSWKCLLGG 491



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 206/396 (52%), Gaps = 22/396 (5%)

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQV---LKNGIDFDHNIRTGLMVAYSKCGK 330
           AG  ++  ++  + + C   K L   R  H Q+   +KN  +F  N    ++  Y KCG 
Sbjct: 4   AGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLEN---SVLKMYCKCGS 60

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           + DA K+F  MRE +++VSW  +IS + +NG  D     F  M     +PNG TY   L 
Sbjct: 61  LADARKVFDEMRE-RNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLR 119

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +    S      Q+H+H I++    + SV TA+ N YVK G L+ A  VFE + EK+ VA
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ---GKQFH 503
           W+ ++ GY Q      A+ ++ ++ +EGV+ +E+ FS V+ AC    A +E+   G+Q H
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKAC----AGLEELNFGRQIH 235

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
              +K  L + + V + LV  Y K  N+ESA++ F+   + + VSW+++I GY Q G  +
Sbjct: 236 GHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFE 295

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG-QQYFDIMVNEHHIYPTMEHYSC 622
           +AL+ F+ +R + ++ +  T+  +  AC+     + G Q + D + +    Y   E  S 
Sbjct: 296 EALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGE--SA 353

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           M+ +YSR G L+ A  +   +     A  W  ++A 
Sbjct: 354 MITMYSRCGRLDYATRVFESID-DPDAVAWTAIIAG 388



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 222/452 (49%), Gaps = 15/452 (3%)

Query: 16  KQPPKSLRSP---FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFL 67
           K PP+ L +     Y K       + +FD   +RN V +N ++  Y  + +  +   +F 
Sbjct: 41  KNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFS 100

Query: 68  GIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN 127
            +  L     GST    L++         G+Q+H   ++SG   + +V+T++ ++Y++  
Sbjct: 101 NMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCG 160

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
            +E    VF+ M+E N V+WT ++ GY + +     L LF +M  EG++ + + FS VL 
Sbjct: 161 WLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLK 220

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
             A    +    Q+H  ++K G E   SV   L+  Y+K   +  A   F+ + + + ++
Sbjct: 221 ACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVS 280

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           W++++ GY       EA +TF ++     ++   T+ S+ + C+   +     Q H+  +
Sbjct: 281 WSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAI 340

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           K+ +    +  + ++  YS+CG+++ A+++F  + +  D V+WTA+I+G+   G    A+
Sbjct: 341 KSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDD-PDAVAWTAIIAGYAYQGNAPEAL 399

Query: 368 NFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNA 422
             F +M   GVRPN  T+  +LTA      V   + +   + +NY  + ++     +++ 
Sbjct: 400 KLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDI 459

Query: 423 YVKKGILDEAAKVFELID-EKDIVAWSAMLAG 453
           Y + G L EA ++   +    D ++W  +L G
Sbjct: 460 YSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/757 (35%), Positives = 420/757 (55%), Gaps = 33/757 (4%)

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
           C CV+ G         +L+ +++R  N+ D   VF  M+E +V SW  L+ GYA+    D
Sbjct: 129 CLCVRLG--------NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFD 180

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
             L L+HRM    I+PN +TF +VL   A    +A   ++H  VI+ G E    V NALI
Sbjct: 181 EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALI 240

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           +MY+K   + +AR +FD M  RD I+WN+M++GY  N   +E  E F+ M     +    
Sbjct: 241 TMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLI 300

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T  +V   C      RL R +H  V+K+    D ++   L+  YS  G++E+A  +FS M
Sbjct: 301 TMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM 360

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
            E KDVVSWTAMI+  + +     AV  +  M  EG+ P+  T   +L+A   +      
Sbjct: 361 -ESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            ++H   IKT       V  +L++ Y K   +D A +VF  I  K++V+W++++ G    
Sbjct: 420 IRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRIN 479

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
             +  A+  +RQ+  E +KPN  T  SV++AC A   A+ +GK+ HA +++  +     +
Sbjct: 480 NRSFEALLFFRQM-KESMKPNSVTLISVLSAC-ARIGALMRGKEIHAHALRTGVGFDGFL 537

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            +A++ MY + G    A   F  Q K+D+ +WN ++ GYAQ G  K A+E+F +M   ++
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
             D ITFI ++ AC+ +G+V EG +YF+IM N++++ P ++HY+C+VD+  RAG L+ A 
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656

Query: 638 DIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATG 683
           D I  MP    A +W  +L ACR+                        Y+LL N+YA  G
Sbjct: 657 DFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCG 716

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
           +W + ++VR LM +R +  + G SW+E+K K ++FL+GD SH QS +I   L+   +++K
Sbjct: 717 NWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMK 776

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
           + G+    S    +I+    + I   HSER AIAFGL+ T  G P+ + KNL +C  CH 
Sbjct: 777 ENGFGNLKSSFTSEIESSRAD-IFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHN 835

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD--YW 838
           ++K IS + RR+I VRD   +HHFK+G+CSCGD  YW
Sbjct: 836 MVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/701 (36%), Positives = 398/701 (56%), Gaps = 64/701 (9%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH  ++ NG +V   + + L+ +Y ++  V DAR +FD M +R+  +W +++  Y    
Sbjct: 31  QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 90

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            + E  + F  M   G       F  V K C+  K  R+ + ++  +L  G + +  ++ 
Sbjct: 91  DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 150

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            ++  + KCG+M+ A + F  + E KDV  W  M+SG+   G    A+N F +M  EGV+
Sbjct: 151 SILDMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVK 209

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAK 434
           PN  T +  ++A   +S      ++H + IK    +    VG +L++ Y K   ++ A +
Sbjct: 210 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 269

Query: 435 VFELIDEKDIVAWSAMLA--GYAQIGDTEGAVKIY------------------------- 467
            F +I + D+V+W+AMLA  G+ Q GD + A++ +                         
Sbjct: 270 KFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSII 329

Query: 468 ----------------RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
                           R++    V+ N  T  S + AC+   AA+ QGK+ H   I+  L
Sbjct: 330 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACS-KLAALRQGKEIHQFIIRCGL 388

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +    + ++L+ MY + G+I+ +  +F    +RDLVSWN MI  Y  HG    A+ +F++
Sbjct: 389 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQ 448

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
            R   L+ + ITF  +++AC+H+GL++EG +YF +M  E+ + P +E Y+CMVDL SRAG
Sbjct: 449 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAG 508

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
              + ++ I +MPF  +A VW ++L ACR              L  L+P  S  YVL++N
Sbjct: 509 QFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMAN 568

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +Y+A G W++ A++R LM +R V K  G SWIEVK K +SF+ GD SHP   QI +K+E 
Sbjct: 569 IYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMES 628

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L   +K+ GY PDT++VLQD+D++ KE  L  HSE++A+AFGL++T AG PL+I+KNLRV
Sbjct: 629 LYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRV 688

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCH+  K ISK+E+RDI++RD  RFHHF +G+CSCGDYW
Sbjct: 689 CGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 248/521 (47%), Gaps = 50/521 (9%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +S+L+ C  L++   G QVH + V +G      + + L+++Y +T  VED RR+FD M+E
Sbjct: 14  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 73

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            NV SWT+++  Y      +  ++LF+ M  EG++P+ F F  V    ++         V
Sbjct: 74  RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           +  ++  G E  + V  +++ M++K   +  AR  F+ +E +D   WN MV+GY +    
Sbjct: 134 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 193

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTG 320
            +A   F  M L G +    T  S +  C     LR  R++H   +K   +D D  +   
Sbjct: 194 KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 253

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM--ISGHLQNGAIDLAVNFFCQM----- 373
           L+  Y+KC  +E A + F M+++  D+VSW AM  ++G  Q G    A+ FF +M     
Sbjct: 254 LVDYYAKCRSVEVARRKFGMIKQ-TDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 374 ------TREGVRPNGFTYSI---------------------------ILTAQPAVSPF-- 398
                 TR+ V  N    +                            +++A PA S    
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 399 -----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                ++H  II+   +    +  +L++ Y + G + ++ ++F+L+ ++D+V+W+ M++ 
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y   G    AV +++Q  + G+KPN  TF+++++AC+      E  K F     +  ++ 
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 492

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           A+   + +V + S+ G      E  ++   + +   W S++
Sbjct: 493 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 533



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 211/422 (50%), Gaps = 51/422 (12%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L   +     + S+++ C     LRL  Q+H+Q++ NG+D    + + L+  Y + G 
Sbjct: 1   MDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 60

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +EDA ++F  M E ++V SWTA++  +   G  +  +  F  M  EGVRP+ F +  +  
Sbjct: 61  VEDARRMFDKMSE-RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFK 119

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   +  ++    V+ +++   +E +  V  ++L+ ++K G +D A + FE I+ KD+  
Sbjct: 120 ACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFM 179

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ M++GY   G+ + A+ ++R++  EGVKPN  T +S ++ACT  S  +  G++ H   
Sbjct: 180 WNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLS-LLRHGREIHGYC 238

Query: 507 IKA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM--ICGYAQHGHTK 563
           IK  +L++ L V ++LV  Y+K  ++E A   F   ++ DLVSWN+M  + G+ Q+G  K
Sbjct: 239 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGK 298

Query: 564 KALEVF-----------------------------------------KEMRRQDLEFDGI 582
            ALE F                                         +EM   ++E + +
Sbjct: 299 AALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTV 358

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           T +  + AC+    + +G++    ++    +       + ++D+Y R G ++K+  I + 
Sbjct: 359 TMVSALPACSKLAALRQGKEIHQFII-RCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDL 417

Query: 643 MP 644
           MP
Sbjct: 418 MP 419



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/474 (22%), Positives = 212/474 (44%), Gaps = 55/474 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+  +RN   +  ++  YC    ++E + LF  +   G+         V K C  L
Sbjct: 65  RRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 124

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            ++  G+ V+   +  GF  +  V  S++D++++   ++  RR F+++   +V  W  ++
Sbjct: 125 KNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 184

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY       + L +F +M +EG+KPNS T ++ +    +  ++    ++H   IK   E
Sbjct: 185 SGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV--E 242

Query: 212 VVTS---VCNALISMYLKSKMVRDAR---------------------------------- 234
            + S   V N+L+  Y K + V  AR                                  
Sbjct: 243 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALE 302

Query: 235 ---------AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
                    +VF  +  RD + WNS+++    +   + A +    M L+  E+   T VS
Sbjct: 303 FFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVS 362

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
            +  C+    LR  +++H  +++ G+D  + I   L+  Y +CG ++ + +IF +M + +
Sbjct: 363 ALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ-R 421

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHA 402
           D+VSW  MIS +  +G    AVN F Q    G++PN  T++ +L+A      +     + 
Sbjct: 422 DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYF 481

Query: 403 HIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAG 453
            ++KT Y    +V     +++   + G  +E  +  E +  E +   W ++L  
Sbjct: 482 KMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA 535



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 9/186 (4%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + +FD  PQR+ V +N ++  Y       +A+NLF   R +GL     T +++L  C
Sbjct: 409 QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSAC 468

Query: 89  --GCLFDHVFGRQVHCECVKSGFARDVNVS--TSLVDLYMRTNNVEDGRRVFDDMN-ESN 143
               L +  +    + + +K+ +A D  V     +VDL  R     +     + M  E N
Sbjct: 469 SHSGLIEEGWK---YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 525

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
              W SLL G  R   N  + E   R   E    +S  +  +  + +  G    A ++  
Sbjct: 526 AAVWGSLL-GACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRC 584

Query: 204 MVIKNG 209
           ++ + G
Sbjct: 585 LMKERG 590


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/767 (34%), Positives = 429/767 (55%), Gaps = 37/767 (4%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+  + +  G   D++  T L   +     V   R++F+ +++ ++  +  L+ G++ N 
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91

Query: 159 MNDRVLELF-HRMQVEGIKPNSFTFSTVLGV---LADEGIVATAVQVHTMVIKNGGEVVT 214
           +    + L+ H  +   ++P++FT++  +     L DE +    V +H   I +G     
Sbjct: 92  LPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERV---GVLLHAHSIVDGVASNL 148

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V +A++ +Y K      AR VFD M +RD++ WN+M++G+  N    ++   F +M   
Sbjct: 149 FVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDV 208

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G     +T  +V+   A  +E RL   +     K G+  D  + TGL+  YSKCGK    
Sbjct: 209 GLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKG 268

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             +F  + +  D++S+ AMISG+  N   + AV  F ++   G R N    S ++   P 
Sbjct: 269 RILFDQI-DQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS---STLVGLIPV 324

Query: 395 VSPFQVHAHIIKTNYEKSFSVG--------TALLNAYVKKGILDEAAKVFELIDEKDIVA 446
             PF  H  + +     S  +G        TAL   Y +   +  A ++F+   EK + +
Sbjct: 325 YLPFN-HLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLAS 383

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM++GY Q G T+ A+ +++++  + + PN  T +S+++AC A   A+  GK  H   
Sbjct: 384 WNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSAC-AQLGALSIGKWVHGLI 441

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
              +L + + VS+ALV MY+K G+I  A ++F     +++V+WN+MI GY  HGH K+AL
Sbjct: 442 KSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEAL 501

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++F EM +  +   G+TF+ ++ AC+H+GLV EG + F  M N +   P  EHY+CMVD+
Sbjct: 502 KLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDI 561

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
             RAG L  A++ I RMP      VW  +L AC              RL  L P +   Y
Sbjct: 562 LGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYY 621

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VLLSN+Y+   ++ + A VR+++  RK+ K  G + IE+ ++ Y F +GD SHPQ+  I+
Sbjct: 622 VLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIF 681

Query: 733 SKLEELSTRLKDAGYKPDT-SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
             LE+L+ ++++AGY+ +T +  L D++DE KE +++ HSE+LAIAFGL++T  G  ++I
Sbjct: 682 EMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRI 741

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLRVC DCHT  K ISK+  R IVVRD NRFHHFK G+CSCGDYW
Sbjct: 742 IKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 268/553 (48%), Gaps = 8/553 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGC 90
           + LF++  + +   +N L+  +  + L + ++ L+  +R+   L     T +  +     
Sbjct: 66  RQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASR 125

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G  +H   +  G A ++ V +++VDLY +    E  R+VFD M E + V W ++
Sbjct: 126 LEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTM 185

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SG++RN   +  + +F  M   G+  +S T +TVL  +A+       + +  +  K G 
Sbjct: 186 ISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL 245

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V   LIS+Y K       R +FD ++  D I++N+M++GY  N     A   F  
Sbjct: 246 HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRE 305

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +  +G  +  ST V +I +      L+L+R + +  LK GI    ++ T L   Y +  +
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++ A ++F    E K + SW AMISG+ QNG  D A++ F +M  + + PN  T + IL+
Sbjct: 366 VQFARQLFDESPE-KSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILS 423

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   +        VH  I     E +  V TAL++ Y K G + EA ++F+L+ +K++V 
Sbjct: 424 ACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM+ GY   G  + A+K++ ++   G+ P   TF S++ AC+      E  + FH+ +
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
                       + +V +  + G + +A E  +R   +     W +++     H +T+ A
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603

Query: 566 LEVFKEMRRQDLE 578
               K + + D E
Sbjct: 604 NVASKRLFQLDPE 616



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 3/265 (1%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S K + LFD+  Q + + YN ++  Y  +   + A+ LF  +   G  +  STL  ++  
Sbjct: 265 SCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPV 324

Query: 88  CGCLFDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               F+H+   R +    +K G     +VST+L  +Y R N V+  R++FD+  E ++ S
Sbjct: 325 Y-LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLAS 383

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +++SGY +N + DR + LF  M  + + PN  T +++L   A  G ++    VH ++ 
Sbjct: 384 WNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIK 442

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
               E    V  AL+ MY K   + +AR +FD M D++ +TWN+M+ GY  +    EA +
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALK 502

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCA 291
            F  M  +G   T  TF+S++  C+
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACS 527


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 265/658 (40%), Positives = 383/658 (58%), Gaps = 21/658 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H ++I  G    T + N L++MY K   +  A  +FD M  R+ ++W +M++G   N 
Sbjct: 26  QLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNS 85

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA  TF  M + G   T+  F S I+ CA+   + + +Q+H   LK GI  +  + +
Sbjct: 86  KFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGS 145

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L   YSKCG M DA K+F  M   KD VSWTAMI G+ + G  + A+  F +M  E V 
Sbjct: 146 NLEDMYSKCGAMFDACKVFEEM-PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVT 204

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            +       L A  A+   +    VH+ ++K  +E    VG AL + Y K G ++ A+ V
Sbjct: 205 IDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNV 264

Query: 436 FELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           F +  E +++V+++ ++ GY +    E  + ++ +L  +G++PNEFTFSS+I AC A  A
Sbjct: 265 FGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC-ANQA 323

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A+EQG Q HA  +K   +    VSS LV MY K G +E A + F        ++WNS++ 
Sbjct: 324 ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVS 383

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            + QHG  K A++ F+ M  + ++ + ITFI ++T C+HAGLV+EG  YF  M   + + 
Sbjct: 384 VFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 443

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  EHYSC++DL  RAG L++A + INRMPF  +A  W + L ACR              
Sbjct: 444 PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEK 503

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L+ L+P +S   VLLSN+YA    W++   VR  M D  VKK  GYSW++V  KT+ F A
Sbjct: 504 LVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGA 563

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
            D SH + + IY KL+ L  ++K AGY P T  V  D+DD  KE +L +HSER+A+AF L
Sbjct: 564 EDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFAL 623

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++ P G P+ + KNLRVC DCH+ IK ISK+  R I+VRD +RFHHF +G CSCGDYW
Sbjct: 624 ISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 236/469 (50%), Gaps = 5/469 (1%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H   + +G+     ++  LV++Y +   ++   ++FD M + N+VSWT+++SG ++
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      +  F  M++ G  P  F FS+ +   A  G +    Q+H + +K G      V
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            + L  MY K   + DA  VF+ M  +D ++W +M+ GY       EA   F  M     
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            + +    S +  C   K  +  R +HS V+K G + D  +   L   YSK G ME AS 
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QP 393
           +F +  E ++VVS+T +I G+++   I+  ++ F ++ R+G+ PN FT+S ++ A   Q 
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 394 AVSP-FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
           A+    Q+HA ++K N+++   V + L++ Y K G+L+ A + F+ I +   +AW+++++
Sbjct: 324 ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVS 383

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            + Q G  + A+K + ++   GVKPN  TF S++  C+      E    F++      + 
Sbjct: 384 VFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVV 443

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
                 S ++ +  + G ++ A E   R   + +   W S +     HG
Sbjct: 444 PGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 198/364 (54%), Gaps = 10/364 (2%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           VI+  A TK LR  +QLH+ ++  G      +   L+  YSKCG+++ A K+F  M + +
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQ-R 69

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVH 401
           ++VSWTAMISG  QN     A+  FC M   G  P  F +S  + A  ++       Q+H
Sbjct: 70  NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 129

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
              +K        VG+ L + Y K G + +A KVFE +  KD V+W+AM+ GY++IG+ E
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 189

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+  ++++  E V  ++    S + AC A  A  + G+  H+  +K    + + V +AL
Sbjct: 190 EALLAFKKMIDEEVTIDQHVLCSTLGACGALKAC-KFGRSVHSSVVKLGFESDIFVGNAL 248

Query: 522 VTMYSKKGNIESASEVFKRQRK-RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
             MYSK G++ESAS VF    + R++VS+  +I GY +    +K L VF E+RRQ +E +
Sbjct: 249 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 308

Query: 581 GITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
             TF  +I AC +   +++G Q +  +M       P +   S +VD+Y + G+LE A+  
Sbjct: 309 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYGKCGLLEHAIQA 366

Query: 640 INRM 643
            + +
Sbjct: 367 FDEI 370



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 204/442 (46%), Gaps = 22/442 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  PQRN V +  ++    ++S   EA+  F G+R  G        SS ++ C  L  
Sbjct: 62  LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+HC  +K G   ++ V ++L D+Y +   + D  +VF++M   + VSWT+++ G
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y++    +  L  F +M  E +  +     + LG             VH+ V+K G E  
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 241

Query: 214 TSVCNALISMYLKSKMVRDARAVFD-GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             V NAL  MY K+  +  A  VF    E R+ +++  ++ GYV  E   +    F  + 
Sbjct: 242 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 301

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G E    TF S+IK CA    L    QLH+QV+K   D D  + + L+  Y KCG +E
Sbjct: 302 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 361

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A + F  + +  + ++W +++S   Q+G    A+ FF +M   GV+PN  T+  +LT  
Sbjct: 362 HAIQAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGC 420

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDEAAKVFELID 440
                   HA +++   +  +S+             + +++   + G L EA +    + 
Sbjct: 421 S-------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP 473

Query: 441 -EKDIVAWSAMLAGYAQIGDTE 461
            E +   W + L      GD E
Sbjct: 474 FEPNAFGWCSFLGACRIHGDKE 495



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 1/154 (0%)

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A +  + +GKQ HA  I A       +++ LV MYSK G ++ A ++F    +R+LVSW 
Sbjct: 16  AKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWT 75

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           +MI G +Q+    +A+  F  MR          F   I AC   G ++ G+Q    +  +
Sbjct: 76  AMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ-MHCLALK 134

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             I   +   S + D+YS+ G +  A  +   MP
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 273/775 (35%), Positives = 425/775 (54%), Gaps = 43/775 (5%)

Query: 85  LKTCGCLFDHVFGRQVHCECVK-SGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           L+ C    D   GR VH   V+  G  R D+  +  L+++Y +   +   RR+FD M E 
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           N+VS+ +L+  +A+    +    LF R++ EG + N F  +T+L +         A  VH
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           +   K G +    V + LI  Y    +V DA  VF+G+  +D++ W +MV+ Y  N+   
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            AF    +  L      R                   + +H   +K   D + ++   L+
Sbjct: 246 NAFRCAQSCSLLAISCAR-------------------QGIHGCAIKTLNDTEPHVGGALL 286

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+KCG ++DA   F M+    DV+  + MIS + Q+   + A   F ++ R  V PN 
Sbjct: 287 DMYAKCGDIKDARLAFEMI-PYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNE 345

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           ++ S +L A   +       Q+H H IK  +E    VG AL++ Y K   +D + K+F  
Sbjct: 346 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 405

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           + + + V+W+ ++ G++Q G  E A+ ++ ++ +  +   + T+SSV+ AC A +A++  
Sbjct: 406 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC-ASTASIRH 464

Query: 499 GKQFHACSI-KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
             Q H CSI K+  NN   + ++L+  Y+K G I  A +VF+   +RD++SWN++I GYA
Sbjct: 465 AGQIH-CSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 523

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
            HG    ALE+F  M + ++E + ITF+ +++ C   GLV+ G   FD M  +H I P+M
Sbjct: 524 LHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSM 583

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLIS 663
           EHY+C+V L  RAG L  A+  I  +P A SA VWR +L++C              +++ 
Sbjct: 584 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 643

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           ++P D   YVLLSNMYAA G   + A +RK M +  V+K  G SW+E+K + ++F  G +
Sbjct: 644 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 703

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
            HP    I + LE L+ +    GY PD + VL D+D E K  +L  HSERLA+A+GLV T
Sbjct: 704 DHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMT 763

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P G P++I+KNLR C DCHT   +ISK+ +R+I+VRD NRFHHF++G CSCGDYW
Sbjct: 764 PPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 818



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 241/506 (47%), Gaps = 26/506 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFDR P+RN V +  L+  + +    + A  LF  +R  G  +    L+++LK    +  
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                 VH    K G   +  V + L+D Y   + V D   VF+ +   + V WT+++S 
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGGEV 212
           Y+ N   +                N+F  +    +LA    ++ A Q +H   IK   + 
Sbjct: 238 YSENDCPE----------------NAFRCAQSCSLLA----ISCARQGIHGCAIKTLNDT 277

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  AL+ MY K   ++DAR  F+ +   D I  + M++ Y  +  + +AFE F  + 
Sbjct: 278 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 337

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +       +  SV++ C    +L   +Q+H+  +K G + D  +   LM  Y+KC  M+
Sbjct: 338 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 397

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            + KIFS +R+  + VSW  ++ G  Q+G  + A++ FC+M    +     TYS +L A 
Sbjct: 398 SSLKIFSSLRDANE-VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 456

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            + +      Q+H  I K+ +     +G +L++ Y K G + +A KVF+ + E+DI++W+
Sbjct: 457 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWN 516

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+++GYA  G    A++++ ++    V+ N+ TF ++++ C +          F +  I 
Sbjct: 517 AIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRID 576

Query: 509 AKLNNALCVSSALVTMYSKKGNIESA 534
             +  ++   + +V +  + G +  A
Sbjct: 577 HGIKPSMEHYTCIVRLLGRAGRLNDA 602



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 169/333 (50%), Gaps = 12/333 (3%)

Query: 30  KDQSL-FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           KD  L F+  P  + +  + ++  Y + + +++A  LFL + R  +     +LSSVL+ C
Sbjct: 296 KDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 355

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +    FG+Q+H   +K G   D+ V  +L+D Y + N+++   ++F  + ++N VSW 
Sbjct: 356 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWN 415

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ G++++ + +  L +F  MQ   +     T+S+VL   A    +  A Q+H  + K+
Sbjct: 416 TIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKS 475

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                T + N+LI  Y K   +RDA  VF  + +RD I+WN++++GY  +    +A E F
Sbjct: 476 TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF 535

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR------TGLM 322
           + M  +  E    TFV+++ +C +T  +      H   L + +  DH I+      T ++
Sbjct: 536 DRMNKSNVESNDITFVALLSVCCSTGLVN-----HGLSLFDSMRIDHGIKPSMEHYTCIV 590

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               + G++ DA +    +      + W A++S
Sbjct: 591 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 623


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/757 (35%), Positives = 420/757 (55%), Gaps = 33/757 (4%)

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
           C CV+ G         +L+ +++R  N+ D   VF  M+E +V SW  L+ GYA+    D
Sbjct: 129 CLCVRLG--------NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFD 180

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
             L L+HRM    I+PN +TF +VL   A    +A   ++H  VI+ G E    V NALI
Sbjct: 181 EALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALI 240

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           +MY+K   + +AR +FD M  RD I+WN+M++GY  N   +E  E F+ M     +    
Sbjct: 241 TMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLI 300

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T  +V   C      RL R +H  V+K+    D ++   L+  YS  G++E+A  +FS M
Sbjct: 301 TMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM 360

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
            E KDVVSWTAMI+  + +     AV  +  M  EG+ P+  T   +L+A   +      
Sbjct: 361 -ESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLG 419

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            ++H   IKT       V  +L++ Y K   +D A +VF  I  K++V+W++++ G    
Sbjct: 420 IRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRIN 479

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
             +  A+  +RQ+  E +KPN  T  SV++AC A   A+ +GK+ HA +++  +     +
Sbjct: 480 NRSFEALLFFRQM-KESMKPNSVTLISVLSAC-ARIGALMRGKEIHAHALRTGVGFDGFL 537

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            +A++ MY + G    A   F  Q K+D+ +WN ++ GYAQ G  K A+E+F +M   ++
Sbjct: 538 PNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEI 596

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
             D ITFI ++ AC+ +G+V EG +YF+IM N++++ P ++HY+C+VD+  RAG L+ A 
Sbjct: 597 HPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656

Query: 638 DIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATG 683
           D I  MP    A +W  +L ACR+                        Y+LL N+YA  G
Sbjct: 657 DFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCG 716

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
           +W + ++VR LM +R +  + G SW+E+K K ++FL+GD SH QS +I   L+   +++K
Sbjct: 717 NWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMK 776

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
           + G+    S    +I+    + I   HSER AIAFGL+ T  G P+ + KNL +C  CH 
Sbjct: 777 ENGFGNLKSSFTSEIESSRAD-IFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHN 835

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD--YW 838
           ++K IS + RR+I VRD   +HHFK+G+CSCGD  YW
Sbjct: 836 MVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/724 (36%), Positives = 417/724 (57%), Gaps = 25/724 (3%)

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           FD++     + W  L++  A++      + LF +M   G++ +S+TFS V    +    V
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
               Q+H  ++K+G     SV N+L++ YLK++ V  AR VFD M +RD I+WNS++ GY
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           V+N L  +    F  M ++G E+  +T VSV   CA ++ + L R +HS  +K     + 
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQM 373
                L+  YSKCG ++ A  +F   REM D  VVS+T+MI+G+ + G    AV  F +M
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVF---REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 237

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EG+ P+ +T + +L             +VH  I + +      V  AL++ Y K G +
Sbjct: 238 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 297

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINA 488
            EA  VF  +  KDI++W+ ++ GY++      A+ ++  L  E    P+E T + V+ A
Sbjct: 298 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPA 357

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C + SA  ++G++ H   ++    +   V+++LV MY+K G +  A  +F     +DLVS
Sbjct: 358 CASLSA-FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 416

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           W  MI GY  HG  K+A+ +F +MR+  +E D I+F+ ++ AC+H+GLVDEG ++F+IM 
Sbjct: 417 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 476

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL------- 661
           +E  I PT+EHY+C+VD+ +R G L KA   I  MP    AT+W  +L  CR+       
Sbjct: 477 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 536

Query: 662 -------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNK 714
                    L+P ++  YVL++N+YA    W++  R+RK +  R ++K  G SWIE+K +
Sbjct: 537 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 596

Query: 715 TYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERL 774
              F+AGD S+P++  I + L ++  R+ + GY P T Y L D ++  KE  L  HSE+L
Sbjct: 597 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 656

Query: 775 AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           A+A G++++  G  +++ KNLRVCGDCH + K +SKL RR+IV+RD+NRFH FK+G CSC
Sbjct: 657 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 716

Query: 835 GDYW 838
             +W
Sbjct: 717 RGFW 720



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 278/545 (51%), Gaps = 17/545 (3%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD       + +N L+ E  +      ++ LF  +   G+ +   T S V K+   L   
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G Q+H   +KSGF    +V  SLV  Y++   V+  R+VFD+M E +V+SW S+++GY
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
             N + ++ L +F +M V GI+ +  T  +V    AD  +++    VH++ +K       
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
             CN L+ MY K   +  A+AVF  M DR  +++ SM+AGY    L  EA + F  M   
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G      T  +V+  CA  + L   +++H  + +N + FD  +   LM  Y+KCG M++A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQP 393
             +FS MR +KD++SW  +I G+ +N   + A++ F  +  E    P+  T + +L A  
Sbjct: 301 ELVFSEMR-VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 359

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           ++S F    ++H +I++  Y     V  +L++ Y K G L  A  +F+ I  KD+V+W+ 
Sbjct: 360 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 419

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HA 504
           M+AGY   G  + A+ ++ Q+   G++ +E +F S++ AC+  S  V++G +F     H 
Sbjct: 420 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS-HSGLVDEGWRFFNIMRHE 478

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
           C I+  + +  C+    V M ++ G++  A    +      D   W +++CG   H   K
Sbjct: 479 CKIEPTVEHYACI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK 534

Query: 564 KALEV 568
            A +V
Sbjct: 535 LAEKV 539



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 226/465 (48%), Gaps = 43/465 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ + +N ++  Y  + L ++ L++F+ +   G+ +  +T+ SV   C   
Sbjct: 99  RKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 158

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR VH   VK+ F+R+     +L+D+Y +  +++  + VF +M++ +VVS+TS++
Sbjct: 159 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 218

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYAR  +    ++LF  M+ EGI P+ +T + VL   A   ++    +VH  + +N   
Sbjct: 219 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 278

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NAL+ MY K   +++A  VF  M  +D I+WN+++ GY  N    EA   FN +
Sbjct: 279 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 338

Query: 272 GLAGAELT--RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            L     +    T   V+  CA+       R++H  +++NG   D ++   L+  Y+KCG
Sbjct: 339 -LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 397

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +  A  +F  +   KD+VSWT MI+G+  +G    A+  F QM + G+  +  ++    
Sbjct: 398 ALLLAHMLFDDIAS-KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF---- 452

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-----EKDI 444
                                       +LL A    G++DE  + F ++      E  +
Sbjct: 453 ---------------------------VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 485

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             ++ ++   A+ GD    +K YR + +  + P+   + +++  C
Sbjct: 486 EHYACIVDMLARTGDL---IKAYRFIENMPIPPDATIWGALLCGC 527


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 256/748 (34%), Positives = 426/748 (56%), Gaps = 23/748 (3%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           +++  + +++  Y+++ N+ + R +FD M +   V+WT L+ GYA+N        LF  M
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              GI P+  + +T+L    +   V    QVH+ VIK G +    V N+L+  Y K++ +
Sbjct: 190 GRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSL 249

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             A  +F+ + +RDS+T+N+++ GY     + EA   F  M   G   T  TF +++   
Sbjct: 250 GLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAG 309

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
               ++   +Q+H  V+K    ++  +   L+  YSK  ++ +ASK+F  M E+ D +S+
Sbjct: 310 IQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEV-DGISY 368

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-----PFQVHAHII 405
             +++ +  NG +  ++  F ++   G     F ++ +L+   A+S       Q+H+  I
Sbjct: 369 NVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSI-AAISLNLDIGRQIHSQTI 427

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
            T+      VG +L++ Y K G   EA ++F  +  +  V W+AM++ Y Q G  E  +K
Sbjct: 428 VTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLK 487

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++ ++    +  +  T++S++ AC A  A++  GKQ H+  I +   + +   SALV MY
Sbjct: 488 LFVEMQRAKIGADAATYASIVRAC-ASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMY 546

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           +K G+I+ A ++F+    R+ VSWN++I  YAQ+G     L +F+EM R  L+ D ++ +
Sbjct: 547 AKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLL 606

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
            ++ AC+H GLV+EG QYFD M   + + P  EHY+  +D+  R G  ++A  ++ +MPF
Sbjct: 607 SILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPF 666

Query: 646 AASATVWRTVLAACRLISLQP---------------HDSAIYVLLSNMYAATGHWQERAR 690
                +W +VL +C +   Q                 D+A YV +SN+YAA G W    +
Sbjct: 667 EPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGK 726

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           V+K M +R VKK   YSW+E+K+KT+ F A D +HPQ  +I  KL+EL  ++   GYKPD
Sbjct: 727 VKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPD 786

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
           +S  L ++D+E K   L  HSER+AIAF L++TP G+P+ ++KNLR C DCH  IK+ISK
Sbjct: 787 SSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISK 846

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + RR+I VRD++RFHHF++G C+C DYW
Sbjct: 847 IVRREITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 287/535 (53%), Gaps = 16/535 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++LFD   QR  V +  L+  Y +++  +EA  LF+ + R G+     +L+++L +    
Sbjct: 152 RTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLL-SGFTE 210

Query: 92  FDHVFG-RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           FD V   RQVH   +K G+   + VS SL+D Y +T ++    ++F+D+ E + V++ +L
Sbjct: 211 FDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNAL 270

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL--GVLADEGIVATAVQVHTMVIKN 208
           L+GY++   N   + LF +MQ  G +P  FTF+ +L  G+  D+  +    QVH  V+K 
Sbjct: 271 LTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDD--IEFGQQVHGFVVKC 328

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                  V NAL+  Y K   V +A  +F  M + D I++N +V  Y  N    E+ E F
Sbjct: 329 NFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELF 388

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             +   G +     F +++ + A +  L + RQ+HSQ +      +  +   L+  Y+KC
Sbjct: 389 KELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKC 448

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G+  +A++IFS +  ++  V WTAMIS ++Q G  +  +  F +M R  +  +  TY+ I
Sbjct: 449 GEFGEANRIFSDL-AIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           + A  +++      Q+H+HII + Y  +   G+AL++ Y K G + +A ++F+ +  ++ 
Sbjct: 508 VRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNS 567

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FH 503
           V+W+A+++ YAQ GD +  ++++ ++   G++P+  +  S++ AC+     VE+G Q F 
Sbjct: 568 VSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSH-CGLVEEGLQYFD 626

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI--CG 555
           + +   KL       ++ + M  + G  + A ++  +   + D + W+S++  CG
Sbjct: 627 SMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCG 681



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 229/448 (51%), Gaps = 17/448 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+  P+R+ V +N LL  Y ++  ++EA+NLF  ++ +G      T +++L T G   D
Sbjct: 255 LFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAIL-TAGIQLD 313

Query: 94  HV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            + FG+QVH   VK  F  +V V+ +L+D Y + + V +  ++F +M E + +S+  L++
Sbjct: 314 DIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVT 373

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            YA N      LELF  +Q  G    +F F+T+L + A    +    Q+H+  I      
Sbjct: 374 CYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAIS 433

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V N+L+ MY K     +A  +F  +  + S+ W +M++ YV   LH +  + F  M 
Sbjct: 434 EILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQ 493

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGK 330
            A      +T+ S+++ CA+   L L +QLHS ++ +G  +  N+ +G  L+  Y+KCG 
Sbjct: 494 RAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSG--YISNVFSGSALVDMYAKCGS 551

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA ++F  M  +++ VSW A+IS + QNG  D  +  F +M R G++P+  +   IL 
Sbjct: 552 IKDALQMFQEM-PVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILC 610

Query: 391 A-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEK 442
           A       +  +  F     I K   +K     T  ++   + G  DEA K+  ++  E 
Sbjct: 611 ACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYAST--IDMLCRGGRFDEAEKLMAQMPFEP 668

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           D + WS++L       + E A K   QL
Sbjct: 669 DEIMWSSVLNSCGIHKNQELAKKAANQL 696



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 263/569 (46%), Gaps = 56/569 (9%)

Query: 131 DGRRVFDDMNESNVVSWTSLL------SGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           DG   + + N+S +  WT ++      +G+  +K  +  L L + +    IKP +    T
Sbjct: 23  DGWSNYLNKNDS-IKVWTCVICLIFTNAGHFGSKQYELTLSLMNNI----IKPCTRNLVT 77

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
            L            + V   +IK G    T   N L+  +L+   +  AR +FD M  ++
Sbjct: 78  TLTAPKPH------LHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKN 131

Query: 245 SITWNSMVAGYV-------------------------------TNELHMEAFETFNNMGL 273
             + N+M+ GY+                                N    EAF  F  MG 
Sbjct: 132 IFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGR 191

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +    +  +++        +   RQ+HS V+K G D    +   L+ +Y K   +  
Sbjct: 192 HGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGL 251

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F+ + E +D V++ A+++G+ + G    A+N F +M   G RP  FT++ ILTA  
Sbjct: 252 AFQLFNDIPE-RDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGI 310

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +       QVH  ++K N+  +  V  ALL+ Y K   + EA+K+F  + E D ++++ 
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++  YA  G  + +++++++L   G     F F++++ +  A S  ++ G+Q H+ +I  
Sbjct: 371 LVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLL-SIAAISLNLDIGRQIHSQTIVT 429

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              + + V ++LV MY+K G    A+ +F     +  V W +MI  Y Q G  +  L++F
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            EM+R  +  D  T+  ++ AC     +  G+Q    ++   +I       S +VD+Y++
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSG-SALVDMYAK 548

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G ++ A+ +   MP   S + W  +++A
Sbjct: 549 CGSIKDALQMFQEMPVRNSVS-WNALISA 576


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/752 (35%), Positives = 421/752 (55%), Gaps = 30/752 (3%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD  +++SLV +Y+R  ++E    VF  +   ++V WT L+S Y     +   + LFHR+
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             EGI  ++  F +VL   + E  +A    +H   ++ G  +   V +AL+SMY +   +
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 231 RDARAVFDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           RDA A+F  +E   D + WN+M+     N    EA E F  M   G      TFVSV K 
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 290 CATTKELRLA--RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           C+++  LR +  +  H+ + + G+  D  + T L+ AY++CG+++ A + F+ M E ++ 
Sbjct: 240 CSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPE-RNA 298

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAH 403
           VSWT+MI+   Q G + LAV  F  M  EGV P   T S +  A            V A 
Sbjct: 299 VSWTSMIAAFAQIGHL-LAVETFHAMLLEGVVP---TRSTLFAALEGCEDLHTARLVEAI 354

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK--DIVAWSAMLAGYAQIGDTE 461
             +       ++ T L+ AY +    ++A +VF   +E   D    +AM+A YAQ  D  
Sbjct: 355 AQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRR 414

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-SIKAKLNNALCVSSA 520
              K++      G+ P+   + + ++AC A  AA+ +G+Q HAC +   +L+  + + +A
Sbjct: 415 STFKLWGAAIERGISPDRILYITALDAC-ASLAALSEGRQIHACVAADRRLDRDVTLGNA 473

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           +V+MY + G++  A + F     RD +SWN+M+   AQHG  +   ++F+ M ++  + +
Sbjct: 474 IVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAE 533

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            + F+ +++AC HAGLV+ G ++F  M  +H + P  EHY CMVDL  R G L  A  I+
Sbjct: 534 RVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIV 593

Query: 641 NRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQ 686
             MP    A  W  ++ ACR+              + L+ + +A YV L N+Y+A G W+
Sbjct: 594 QAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWE 653

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + A VRK+M D  ++K  G S IE+++K + F+  D SHPQS  IY++LE +   ++ AG
Sbjct: 654 DAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAG 713

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y+  T  VL D+++E KE +L  HSE+LAIAFG+++TP G+ L+++KNLRVC DCH   K
Sbjct: 714 YRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNASK 773

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ISK+  R+IVVRD  RFHHFK+G CSCGDYW
Sbjct: 774 FISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 216/504 (42%), Gaps = 43/504 (8%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQV- 100
           + V +N ++    ++   +EAL +F  + +LG+P    T  SV K C      +   QV 
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS-SPSLRASQVK 252

Query: 101 --HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
             H    ++G   DV V+T+LV+ Y R   ++  R  F  M E N VSWTS+++ +A+  
Sbjct: 253 GFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIG 312

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
            +   +E FH M +EG+ P   T ST+   L     + TA  V  +  + G     ++  
Sbjct: 313 -HLLAVETFHAMLLEGVVP---TRSTLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVT 368

Query: 219 ALISMYLKSKMVRDARAVFDGMEDR--DSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            L+  Y +     DA  VF   E+   D+    +M+A Y         F+ +      G 
Sbjct: 369 DLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGI 428

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDAS 335
              R  +++ +  CA+   L   RQ+H+ V  +  +D D  +   ++  Y +CG + DA 
Sbjct: 429 SPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDAR 488

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
             F  M   +D +SW AM+S   Q+G ++   + F  M +EG       +  +L+A    
Sbjct: 489 DAFDGM-PARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACA-- 545

Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
                HA +++   E  FS  T         G++        ++D         +L    
Sbjct: 546 -----HAGLVEAGCEH-FSAMTG------DHGVVPATEHYGCMVD---------LLGRKG 584

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           ++ D  G V+      +  V P+  T+ +++ AC       E+G+ F A  +     N  
Sbjct: 585 RLADAHGIVQ------AMPVPPDAATWMALMGACRI-YGDTERGR-FAAERVLELRANHT 636

Query: 516 CVSSALVTMYSKKGNIESASEVFK 539
               AL  +YS  G  E A+ V K
Sbjct: 637 AAYVALCNIYSAAGRWEDAAAVRK 660


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/753 (35%), Positives = 423/753 (56%), Gaps = 32/753 (4%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD  +++SLV +Y+R  ++E    VF  +   ++V WT L+S Y     +   + LFHR+
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             EGI  ++  F +VL   + E  +A    +H   ++ G  +   V +AL+SMY +   +
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 231 RDARAVFDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           RDA A+F  +E   D + WN+M+     N    EA E F  M   G      TFVSV K 
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 290 CATTKELRLA--RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           C+++  LR +  +  H+ + + G+  D  + T L+ AY++CG+++ A K F+ M E ++ 
Sbjct: 240 CSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPE-RNA 298

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
           VSWT+MI+   Q G + LAV  F  M  EGV P   T S +  A       +V A +++ 
Sbjct: 299 VSWTSMIAAFTQIGHL-LAVETFHAMLLEGVVP---TRSTLFAALEGCEDLRV-ARLVEA 353

Query: 408 NYEK-----SFSVGTALLNAYVKKGILDEAAKVFELIDEK--DIVAWSAMLAGYAQIGDT 460
             ++       ++ T L+ AY +    ++A +VF   +E   D    +AM+A YAQ  D 
Sbjct: 354 IAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDR 413

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-SIKAKLNNALCVSS 519
               K++      G+ P+   + + ++AC A  AA+ +G+Q HAC +   +L+  + + +
Sbjct: 414 RSTFKLWGAAIERGISPDRILYITALDAC-ASLAALSEGRQIHACVAADRRLDRDVTLGN 472

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           A+V+MY + G++  A + F     RD +SWN+M+   AQHG  +   ++F+ M ++  + 
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDA 532

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           + I F+ +++AC HAGLV  G ++F  M  +H + P  EHY CMVDL  R G L  A  I
Sbjct: 533 ERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGI 592

Query: 640 INRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHW 685
           +  MP    A  W  ++ ACR+              + L+   +A YV L N+Y+A G W
Sbjct: 593 VQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRW 652

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
            + A VRK+M D  ++K  G S IE+++K + F+  D SHPQS  IY++LE +   ++ A
Sbjct: 653 DDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERA 712

Query: 746 GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVI 805
           GY+  T  VL D+++E KE +L  HSE+LAIAFG+++TP G+ L+++KNLRVC DCH   
Sbjct: 713 GYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNAS 772

Query: 806 KLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           K ISK+  R+IVVRD  RFHHFK+G CSCGDYW
Sbjct: 773 KFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 193/440 (43%), Gaps = 34/440 (7%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQV- 100
           + V +N ++    ++   +EAL +F  + +LG+P    T  SV K C      +   QV 
Sbjct: 194 DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS-SPSLRASQVK 252

Query: 101 --HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
             H    ++G   DV V+T+LV+ Y R   ++  R+ F +M E N VSWTS+++ + +  
Sbjct: 253 GFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIG 312

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
            +   +E FH M +EG+ P   T ST+   L     +  A  V  +  + G     ++  
Sbjct: 313 -HLLAVETFHAMLLEGVVP---TRSTLFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVT 368

Query: 219 ALISMYLKSKMVRDARAVFDGMEDR--DSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            L+  Y +     DA  VF   E+   D+    +M+A Y         F+ +      G 
Sbjct: 369 DLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGI 428

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDAS 335
              R  +++ +  CA+   L   RQ+H+ V  +  +D D  +   ++  Y +CG + DA 
Sbjct: 429 SPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDAR 488

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
             F  M   +D +SW AM+S   Q+G ++   + F  M +EG       +  +L+A    
Sbjct: 489 DAFDGM-PARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACA-- 545

Query: 396 SPFQVHAHIIKTNYEKSFSVGTA-------------LLNAYVKKGILDEAAKVFELID-E 441
                HA ++K   E  FS  T              +++   +KG L +A  + + +   
Sbjct: 546 -----HAGLVKAGCEH-FSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVP 599

Query: 442 KDIVAWSAMLAGYAQIGDTE 461
            D   W A++      GDTE
Sbjct: 600 PDAATWMALMGACRIYGDTE 619


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/746 (36%), Positives = 428/746 (57%), Gaps = 26/746 (3%)

Query: 115 VSTSL-VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
           VST++ +  Y+++ N+ + R++FD M E   V+WT L+ GY++        ELF +MQ  
Sbjct: 84  VSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC 143

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G +P+  TF T+L       +     QV T +IK G +    V N L+  Y KS  +  A
Sbjct: 144 GTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 203

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             +F  M + DS+++N+M+ GY  + L  +A   F  M  +G + T  TF +V  LCA  
Sbjct: 204 CQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAV--LCANI 261

Query: 294 --KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
              ++ L +Q+HS V+K    ++  +   L+  YSK   + DA K+F  M E +D VS+ 
Sbjct: 262 GLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE-QDGVSYN 320

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT 407
            +ISG+  +G    A + F ++         F ++ +L+       +    Q+HA  I T
Sbjct: 321 VIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVT 380

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
             +    VG +L++ Y K G  +EA  +F  +  +  V W+AM++ Y Q G  E  ++++
Sbjct: 381 TADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLF 440

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
            ++    V  ++ TF+S++ A +A  A++  GKQ H+  IK+   + +   SAL+ +Y+K
Sbjct: 441 NKMRQASVIADQATFASLLRA-SASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAK 499

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G+I+ A + F+    R++VSWN+MI  YAQ+G  +  L+ FKEM    L+ D ++F+GV
Sbjct: 500 CGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV 559

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           ++AC+H+GLV+EG  +F+ M   + + P  EHY+ +VD+  R+G   +A  ++  MP   
Sbjct: 560 LSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDP 619

Query: 648 SATVWRTVLAACRLISLQP---------------HDSAIYVLLSNMYAATGHWQERARVR 692
              +W +VL ACR+   Q                 D+A YV +SN+YAA G W+  ++V 
Sbjct: 620 DEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVH 679

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           K M DR VKK   YSW+E+K++T+ F A D  HPQ  +I  K++ L+  +++ GYKPDTS
Sbjct: 680 KAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTS 739

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
             L + D++ K   L  HSERLAIAF L++TP G+P+ ++KNLR C DCH  IK+ISK+ 
Sbjct: 740 CALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIV 799

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R+I VRD+ RFHHF++G CSCGD+W
Sbjct: 800 GREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 286/531 (53%), Gaps = 14/531 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD   +R  V +  L+  Y + +  +EA  LF+ ++R G      T  ++L  C   
Sbjct: 103 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN-- 160

Query: 92  FDHVFGRQ---VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             H  G Q   V  + +K G+   + V  +LVD Y ++N ++   ++F +M E + VS+ 
Sbjct: 161 -GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYN 219

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++GY+++ ++++ + LF  MQ  G+KP  FTF+ VL        +    Q+H+ VIK 
Sbjct: 220 AMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKT 279

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                  V NAL+  Y K   V DAR +FD M ++D +++N +++GY  +  H  AF+ F
Sbjct: 280 NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 339

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             +     +  +  F +++ + + T +  + RQ+H+Q +    D +  +   L+  Y+KC
Sbjct: 340 RELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC 399

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           GK E+A  IF+ +   +  V WTAMIS ++Q G  +  +  F +M +  V  +  T++ +
Sbjct: 400 GKFEEAEMIFTNLTH-RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 458

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A  +++      Q+H+ IIK+ +  +   G+ALL+ Y K G + +A + F+ + +++I
Sbjct: 459 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 518

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK-QFH 503
           V+W+AM++ YAQ G+ E  +K ++++   G++P+  +F  V++AC+  S  VE+G   F+
Sbjct: 519 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSH-SGLVEEGLWHFN 577

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           + +   KL+      +++V M  + G    A ++        D + W+S++
Sbjct: 578 SMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 628



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 245/489 (50%), Gaps = 39/489 (7%)

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT------- 257
           ++K G +  TS  N  +  +LK+  +  AR +F+ M  +++++ N M++GYV        
Sbjct: 43  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 102

Query: 258 ----------------------NELHM--EAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
                                 ++L+   EAFE F  M   G E    TFV+++  C   
Sbjct: 103 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 162

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           +      Q+ +Q++K G D    +   L+ +Y K  +++ A ++F  M E+ D VS+ AM
Sbjct: 163 EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI-DSVSYNAM 221

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           I+G+ ++G  + AVN F +M   G++P  FT++ +L A   +       Q+H+ +IKTN+
Sbjct: 222 ITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNF 281

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
             +  V  ALL+ Y K   + +A K+F+ + E+D V+++ +++GYA  G  + A  ++R+
Sbjct: 282 VWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRE 341

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           L        +F F++++ +  + +   E G+Q HA +I    ++ + V ++LV MY+K G
Sbjct: 342 LQFTAFDRKQFPFATML-SIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCG 400

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
             E A  +F     R  V W +MI  Y Q G  ++ L++F +MR+  +  D  TF  ++ 
Sbjct: 401 KFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLR 460

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           A      +  G+Q    ++    +       S ++D+Y++ G ++ A+     MP   + 
Sbjct: 461 ASASIASLSLGKQLHSFIIKSGFMSNVFSG-SALLDVYAKCGSIKDAVQTFQEMP-DRNI 518

Query: 650 TVWRTVLAA 658
             W  +++A
Sbjct: 519 VSWNAMISA 527



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 47/417 (11%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFD---HNIRTG----------------- 320
           STF+    L +    L +   + ++++K G D D    N R G                 
Sbjct: 18  STFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEK 77

Query: 321 -----------LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
                      ++  Y K G + +A K+F  M E +  V+WT +I G+ Q      A   
Sbjct: 78  MPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVE-RTAVTWTILIGGYSQLNQFKEAFEL 136

Query: 370 FCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F QM R G  P+  T+  +L+     +      QV   IIK  Y+    VG  L+++Y K
Sbjct: 137 FVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCK 196

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
              LD A ++F+ + E D V+++AM+ GY++ G  E AV ++ ++ + G+KP EFTF++V
Sbjct: 197 SNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAV 256

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + A       V  G+Q H+  IK      + VS+AL+  YSK  ++  A ++F    ++D
Sbjct: 257 LCANIGLDDIV-LGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQD 315

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
            VS+N +I GYA  G  K A ++F+E++    +     F  +++  ++    + G+Q   
Sbjct: 316 GVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQ--- 372

Query: 606 IMVNEHHIYPTMEHY----SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
             ++   I  T +      + +VD+Y++ G  E+A  I   +    SA  W  +++A
Sbjct: 373 --IHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTH-RSAVPWTAMISA 426


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/767 (34%), Positives = 429/767 (55%), Gaps = 37/767 (4%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+  + +  G   D++  T L   +     V   R++F+ +++ ++  +  L+ G++ N 
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91

Query: 159 MNDRVLELF-HRMQVEGIKPNSFTFSTVLGV---LADEGIVATAVQVHTMVIKNGGEVVT 214
           +    + L+ H  +   ++P++FT++  +     L DE +    V +H   I +G     
Sbjct: 92  LPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERV---GVLLHAHSIVDGVASNL 148

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V +A++ +Y K      AR VFD M +RD++ WN+M++G+  N    ++   F +M   
Sbjct: 149 FVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDV 208

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G     +T  +V+   A  +E RL   +     K G+  D  + TGL+  YSKCGK    
Sbjct: 209 GLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKG 268

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             +F  + +  D++S+ AMISG+  N   + AV  F ++   G R N    S ++   P 
Sbjct: 269 RILFDQI-DQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS---STLVGLIPV 324

Query: 395 VSPFQVHAHIIKTNYEKSFSVG--------TALLNAYVKKGILDEAAKVFELIDEKDIVA 446
             PF  H  + +     S  +G        TAL   Y +   +  A ++F+   EK + +
Sbjct: 325 YLPFN-HLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLAS 383

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM++GY Q G T+ A+ +++++  + + PN  T +S+++AC A   A+  GK  H   
Sbjct: 384 WNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSAC-AQLGALSIGKWVHGLI 441

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
              +L + + VS+ALV MY+K G+I  A ++F     +++V+WN+MI GY  HGH K+AL
Sbjct: 442 KSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEAL 501

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++F EM +  +   G+TF+ ++ AC+H+GLV EG + F  M N +   P  EHY+CMVD+
Sbjct: 502 KLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDI 561

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
             RAG L  A++ I RMP      VW  +L AC              RL  L P +   Y
Sbjct: 562 LGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYY 621

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VLLSN+Y+   ++ + A VR+++  RK+ K  G + IE+ ++ Y F +GD SHPQ+  I+
Sbjct: 622 VLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIF 681

Query: 733 SKLEELSTRLKDAGYKPDT-SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
             LE+L+ ++++AGY+ +T +  L D++DE KE +++ HSE+LAIAFGL++T  G  ++I
Sbjct: 682 EMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEIRI 741

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLRVC DCHT  K ISK+  R IVVRD NRFHHFK G+CSCGDYW
Sbjct: 742 IKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 268/553 (48%), Gaps = 8/553 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKTCGC 90
           + LF++  + +   +N L+  +  + L + ++ L+  +R+   L     T +  +     
Sbjct: 66  RQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASR 125

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G  +H   +  G A ++ V +++VDLY +    E  R+VFD M E + V W ++
Sbjct: 126 LEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTM 185

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SG++RN   +  + +F  M   G+  +S T +TVL  +A+       + +  +  K G 
Sbjct: 186 ISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL 245

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V   LIS+Y K       R +FD ++  D I++N+M++GY  N     A   F  
Sbjct: 246 HSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRE 305

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +  +G  +  ST V +I +      L+L+R + +  LK GI    ++ T L   Y +  +
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++ A ++F    E K + SW AMISG+ QNG  D A++ F +M  + + PN  T + IL+
Sbjct: 366 VQFARQLFDESPE-KSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILS 423

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   +        VH  I     E +  V TAL++ Y K G + EA ++F+L+ +K++V 
Sbjct: 424 ACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVT 483

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM+ GY   G  + A+K++ ++   G+ P   TF S++ AC+      E  + FH+ +
Sbjct: 484 WNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMA 543

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
                       + +V +  + G + +A E  +R   +     W +++     H +T+ A
Sbjct: 544 NNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA 603

Query: 566 LEVFKEMRRQDLE 578
               K + + D E
Sbjct: 604 NVASKRLFQLDPE 616



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 3/265 (1%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S K + LFD+  Q + + YN ++  Y  +   + A+ LF  +   G  +  STL  ++  
Sbjct: 265 SCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPV 324

Query: 88  CGCLFDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               F+H+   R +    +K G     +VST+L  +Y R N V+  R++FD+  E ++ S
Sbjct: 325 Y-LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLAS 383

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +++SGY +N + DR + LF  M  + + PN  T +++L   A  G ++    VH ++ 
Sbjct: 384 WNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIK 442

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
               E    V  AL+ MY K   + +AR +FD M D++ +TWN+M+ GY  +    EA +
Sbjct: 443 SERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALK 502

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCA 291
            F  M  +G   T  TF+S++  C+
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACS 527


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 272/774 (35%), Positives = 437/774 (56%), Gaps = 44/774 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ VH   +K+ F   + +  +L+++Y +  +     ++FD M++SN+V++ SL+SGY +
Sbjct: 78  GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQ 137

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
               D+V+ LF + +  G+K + +T +  L   +  G ++    +H +++  G      +
Sbjct: 138 MSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVL 197

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+LI MY K   V  AR +FD  +  D ++WNS++AGYV N  + E       M   G 
Sbjct: 198 TNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGL 257

Query: 277 ELTRSTFVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                T  S +K C++           LH   +K G+  D  + T L+  Y+K G ++DA
Sbjct: 258 AFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDA 317

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAID-----LAVNFFCQMTREGVRPNGFTYSIIL 389
            +IF  M + K+VV + AM++G LQ   I+      A+N F +M   G++P+ FTYS +L
Sbjct: 318 IQIFDQMVD-KNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLL 376

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   V  F    QVHA + K        +G+ L++ Y   G + +A   F  I    IV
Sbjct: 377 KACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIV 436

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
             +AM+ GY Q G+ E A+ ++ +L +   KP+EF  S+++++C A    +  G+Q    
Sbjct: 437 PMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSC-ANMGMLRSGEQIQGH 495

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           + K  ++      ++ + MY+K G++ +A+  F++    D+VSW++MIC  AQHGH  +A
Sbjct: 496 ATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEA 555

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L  F+ M+   +E +   F+GV+ AC+H GLV+EG +YFD M  ++ +   ++H  C+VD
Sbjct: 556 LRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVD 615

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAI 671
           L  RAG L  A  +I R+ F     +WR +L+ACR+              I L+P  SA 
Sbjct: 616 LLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASAS 675

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLL N+Y   G+    ++VR LM +R++KKE G SWI++ +K YSF++GD SH  S QI
Sbjct: 676 YVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQI 735

Query: 732 YSKLEEL---STRLKDA----GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           Y+KL+E+   + RL  A    GYK         I+ EH   + + HSE+LA+AFG++   
Sbjct: 736 YAKLDEMLATTKRLDSAKDILGYK---------IEHEHLTNV-NYHSEKLAVAFGVLYLS 785

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             AP++++KNLR+C DCH  +KL S +E+R+++VRD+ RFHHFK+G CSCGDYW
Sbjct: 786 ESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSCGDYW 839



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 268/556 (48%), Gaps = 19/556 (3%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           ++    LFD+  + N V YN L+  Y + S   + + LF   RRLGL L   T +  L  
Sbjct: 110 TRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTA 169

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C    +   G+ +H   +  G    V ++ SL+D+Y +   V+  R +FD  ++ + VSW
Sbjct: 170 CSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSW 229

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD--EGIVATAVQVHTMV 205
            SL++GY +N   + +L +  +M   G+  N++T  + L   +    G       +H   
Sbjct: 230 NSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 289

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE-----L 260
           IK G  +   V  AL+ MY K+  + DA  +FD M D++ + +N+M+AG +  E      
Sbjct: 290 IKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKC 349

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             +A   F  M   G + +  T+ S++K C   ++ + A+Q+H+ + KNG+  D  I + 
Sbjct: 350 AYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSI 409

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  YS  G M DA   F+ +  +  +V  TAMI G+LQNG  + A++ F ++     +P
Sbjct: 410 LIDLYSVLGSMMDALLCFNSIHNLT-IVPMTAMIXGYLQNGEFESALSLFYELLTYEEKP 468

Query: 381 NGFTYSIILTAQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + F  S I+++   +    S  Q+  H  K    +      + +  Y K G L  A   F
Sbjct: 469 DEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTF 528

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           + ++  DIV+WS M+   AQ G    A++ +  + S G++PN F F  V+ AC+     V
Sbjct: 529 QQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACS-HRGLV 587

Query: 497 EQGKQFHAC---SIKAKLNNALCVSSALVTMYSKKGNIESA-SEVFKRQRKRDLVSWNSM 552
           E+G ++        K KL+   CV   +V +  + G +  A S + +   + + V W ++
Sbjct: 588 EEGLRYFDTMEKDYKMKLHVKHCV--CVVDLLGRAGRLADAESLILRLGFEHEPVMWRAL 645

Query: 553 ICGYAQHGHTKKALEV 568
           +     H  T  A  V
Sbjct: 646 LSACRIHKDTVTAQRV 661



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 197/404 (48%), Gaps = 26/404 (6%)

Query: 262 MEAFETFNNMGLAGAEL---TRSTF-------VSVIKLCATTKELRLARQLHSQVLKNGI 311
           +E+F T  ++ L+ +++     STF       V +++    T +L   + +HS ++K   
Sbjct: 31  IESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSF 90

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
                ++  L+  Y KCG    A K+F  M +  ++V++ ++ISG++Q   +D  +  F 
Sbjct: 91  RPCLFLQNNLLNMYCKCGDTRSADKLFDKMSK-SNIVTYNSLISGYVQMSNLDKVMILFD 149

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           +  R G++ + +T +  LTA            +H  I+         +  +L++ Y K G
Sbjct: 150 KARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCG 209

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +D A  +F+  D+ D V+W++++AGY Q G  E  + I +++   G+  N +T  S + 
Sbjct: 210 QVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALK 269

Query: 488 ACTAPSAAVEQ-GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           AC++     +  G   H  +IK  L+  + V +AL+ MY+K G+++ A ++F +   +++
Sbjct: 270 ACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNV 329

Query: 547 VSWNSMICGYAQHGHTK-----KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
           V +N+M+ G  Q    +     KAL +F EM+   ++    T+  ++ AC         +
Sbjct: 330 VMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAK 389

Query: 602 QYFDIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKAMDIINRM 643
           Q   +M     +    + Y  S ++DLYS  G +  A+   N +
Sbjct: 390 QVHALMCKNGLL---SDEYIGSILIDLYSVLGSMMDALLCFNSI 430


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/642 (40%), Positives = 379/642 (59%), Gaps = 28/642 (4%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG---A 276
           ++S Y +   +   R  FD M   D ++WN+++A Y+ N      +  F  M L G    
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E+  S F+S    C   +E+ + R +   +L  GI+ +  ++T L+  Y K G   DA+ 
Sbjct: 61  EVGISIFLSA---CTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAAS 117

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M   +DVV+W+AM++ + +NG    A+  F QM  +GV PN  T    L A  ++ 
Sbjct: 118 VFLRMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLG 176

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             +    +H  +     +    VGTAL+N Y K G ++ A + F  I EK++VAWSA+ A
Sbjct: 177 DLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISA 236

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS--IKAK 510
            YA+      A+++  ++  EG+ PN  TF SV++AC A  AA++QG++ H  +  +   
Sbjct: 237 AYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAA-IAALKQGRRIHERTQVLGGG 295

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L + + V +ALV MYSK GN+  A ++F +    DLV WNS+I   AQHG T+KALE+F+
Sbjct: 296 LESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFE 355

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            MR + L+   ITF  V+ AC+HAG++D+G+++F   + +H I+P  EH+ CMVDL  RA
Sbjct: 356 RMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRA 415

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLS 676
           G +  + D++  MPF      W   L ACR              L  L P   A YVLLS
Sbjct: 416 GWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLS 475

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           NMYA  G W + AR+R+ M      KEAG SWIEVK++ + F++GD+ HP+  +I+++L+
Sbjct: 476 NMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQ 535

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
            L+  +K+AGY PDT  VL D+  E KE ++  HSE+LA+AF L+ TP G+P+++VKNLR
Sbjct: 536 RLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLR 595

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VC DCHT  K ISKL  R+IVVRD NRFH F+ G CSCGDYW
Sbjct: 596 VCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 201/389 (51%), Gaps = 8/389 (2%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           ++  Y +  N+   R+ FD+M  +++VSW +L++ Y  N+  DR    F  M ++GI P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
               S  L    D   +     +   ++  G E  + V  AL+SMY K     DA +VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M  RD + W++MVA Y  N    EA   F  M L G    + T VS +  CA+  +LR 
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
              +H +V   GI     + T L+  Y KCG++E A + F  + E K+VV+W+A+ + + 
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVE-KNVVAWSAISAAYA 239

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VH--AHIIKTNYEKS 412
           +N     A+    +M  EG+ PN  T+  +L A  A++  +    +H    ++    E  
Sbjct: 240 RNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
             V TAL+N Y K G L  A  +F+ I   D+V W++++A  AQ G TE A++++ ++  
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRL 359

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           EG++P   TF+SV+ AC+  +  ++QG++
Sbjct: 360 EGLQPTIITFTSVLFACS-HAGMLDQGRK 387



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 177/359 (49%), Gaps = 3/359 (0%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD  P  + V +N L+  Y  +         F G+   G+      +S  L  C    + 
Sbjct: 18  FDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREI 77

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             GR +    + +G   +  V T+LV +Y +  +  D   VF  M+  +VV+W+++++ Y
Sbjct: 78  TIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAY 137

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           ARN      L LF +M ++G+ PN  T  + L   A  G + +   +H  V   G +   
Sbjct: 138 ARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGV 197

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  AL+++Y K   +  A   F  + +++ + W+++ A Y  N+ + +A    + M L 
Sbjct: 198 VVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLE 257

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLH--SQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           G     +TFVSV+  CA    L+  R++H  +QVL  G++ D  + T L+  YSKCG + 
Sbjct: 258 GLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLA 317

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            A  +F  +  + D+V W ++I+ + Q+G  + A+  F +M  EG++P   T++ +L A
Sbjct: 318 LAGDMFDKIAHL-DLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFA 375



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 150/326 (46%), Gaps = 3/326 (0%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F R   R+ V ++ ++  Y R+   +EAL LF  +   G+     TL S L  C  L 
Sbjct: 117 SVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLG 176

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   G  +H      G    V V T+LV+LY +   +E     F  + E NVV+W+++ +
Sbjct: 177 DLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISA 236

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH--TMVIKNGG 210
            YARN  N   + + HRM +EG+ PNS TF +VL   A    +    ++H  T V+  G 
Sbjct: 237 AYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGL 296

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E    V  AL++MY K   +  A  +FD +   D + WNS++A    +    +A E F  
Sbjct: 297 ESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFER 356

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCG 329
           M L G + T  TF SV+  C+    L   R+     + +   F      G MV    + G
Sbjct: 357 MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAG 416

Query: 330 KMEDASKIFSMMREMKDVVSWTAMIS 355
            + D+  +   M      V+W A + 
Sbjct: 417 WIVDSEDLLLHMPFEPHPVAWMAFLG 442


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/636 (38%), Positives = 374/636 (58%), Gaps = 48/636 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NAL+S Y KS  +++ +A FD M  RDS+++N+ +AG+  N    E+ E F  M   G E
Sbjct: 93  NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T  T VS++   A   +LR  +Q+H  ++      +  I   L   Y+KCG++E A  +
Sbjct: 153 PTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  + + K++VSW  MISG+ +NG  +  +    QM   G  P+  T S I+ A      
Sbjct: 213 FDCLTK-KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------ 265

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
                                    Y + G +DEA +VF    EKDIV W+AM+ GYA+ 
Sbjct: 266 -------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G  E A+ ++ ++  E ++P+ +T SSV+++C A  A++  G+  H  SI A LNN L V
Sbjct: 301 GREEDALLLFNEMLLEHIEPDSYTLSSVVSSC-AKLASLHHGQAVHGKSILAGLNNNLLV 359

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           SSAL+ MYSK G I+ A  VF     R++VSWN+MI G AQ+GH K ALE+F+ M +Q  
Sbjct: 360 SSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF 419

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D +TFIG+++AC H   +++GQ+YFD + N+H + PT++HY+CMV+L  R G +E+A+
Sbjct: 420 KPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAV 479

Query: 638 DIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATG 683
            +I  M       +W T+L+ C               L  L P  +  Y++LSNMYA+ G
Sbjct: 480 ALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMG 539

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W++ A VR LM  + VKK AG+SWIE+ N+ + F + D +HP+S  IY KL  L  +L+
Sbjct: 540 RWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQ 599

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG-APLQIVKNLRVCGDCH 802
           + G+ P+T+ VL D+ ++ K   +  HSE+LA+AFGL+  P G +P++I+KN+R+C DCH
Sbjct: 600 EEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCH 659

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             +K  S++  R I++RD+NRFHHF  G CSC D W
Sbjct: 660 EFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 221/449 (49%), Gaps = 43/449 (9%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD+    +L+  Y ++ ++++ +  FD M   + VS+ + ++G++ N      LELF RM
Sbjct: 87  RDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRM 146

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           Q EG +P  +T  ++L   A    +    Q+H  +I         + NAL  MY K   +
Sbjct: 147 QREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI 206

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             AR +FD +  ++ ++WN M++GY  N    +     + M L+G    + T  ++I   
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII--- 263

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
                                            AY +CG++++A ++FS  +E KD+V W
Sbjct: 264 --------------------------------AAYCQCGRVDEARRVFSEFKE-KDIVCW 290

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
           TAM+ G+ +NG  + A+  F +M  E + P+ +T S ++++   ++       VH   I 
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
                +  V +AL++ Y K G +D+A  VF L+  +++V+W+AM+ G AQ G  + A+++
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALEL 410

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMY 525
           +  +  +  KP+  TF  +++AC   +  +EQG++ F + + +  +   L   + +V + 
Sbjct: 411 FENMLQQKFKPDNVTFIGILSACLHCN-WIEQGQEYFDSITNQHGMTPTLDHYACMVNLL 469

Query: 526 SKKGNIESASEVFKRQ-RKRDLVSWNSMI 553
            + G IE A  + K      D + W++++
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLL 498



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 211/452 (46%), Gaps = 56/452 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++ FDR P R+ V YN  +  +  +S  QE+L LF  ++R G      T+ S+L     L
Sbjct: 109 KATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQL 168

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  +G+Q+H   +   F  +V +  +L D+Y +   +E  R +FD + + N+VSW  ++
Sbjct: 169 SDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMI 228

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+N   ++ + L H+M++ G  P+  T ST+                          
Sbjct: 229 SGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI-------------------------- 262

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                    I+ Y +   V +AR VF   +++D + W +M+ GY  N    +A   FN M
Sbjct: 263 ---------IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEM 313

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L   E    T  SV+  CA    L   + +H + +  G++ +  + + L+  YSKCG +
Sbjct: 314 LLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFI 373

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA  +F++M   ++VVSW AMI G  QNG    A+  F  M ++  +P+  T+  IL+A
Sbjct: 374 DDARSVFNLM-PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGT------------ALLNAYVKKGILDEA-AKVFEL 438
                   +H + I+   E   S+               ++N   + G +++A A +  +
Sbjct: 433 -------CLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNM 485

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
             + D + WS +L+  +  GD   A    R L
Sbjct: 486 AHDPDFLIWSTLLSICSTKGDIVNAEVAARHL 517


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 270/762 (35%), Positives = 424/762 (55%), Gaps = 30/762 (3%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q H + + +G   D+   T L         ++    +F  +   ++  +  L+  ++ N 
Sbjct: 28  QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNN 87

Query: 159 MNDRVLELF-HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                + L+ H  +   ++P++FT++ V+   +    +   +  H++V   G ++   V 
Sbjct: 88  SPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSL-GLGLLLHAHSIVAGFGSDLF--VG 144

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           +A+++ Y K   V  AR VFDGM +RD++ WN+MV+G V N    EA   F +M   G  
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
              +T  +V+   A  ++L L   +    +K G      + TGL   YSKCG++E A  +
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  + +  D+VS+ AMISG+  N   + +V  F ++   G + N    S I+   P   P
Sbjct: 265 FGQIGQ-PDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNS---SSIVGLIPVFFP 320

Query: 398 FQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           F        +H    K+    + SV TAL   Y +   ++ A  +F+   EK + +W+AM
Sbjct: 321 FGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAM 380

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           ++GYAQ G TE A+ +++++    V+PN  T +S+++AC A   A+  GK  H    +  
Sbjct: 381 ISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSAC-AQLGALSLGKWVHDLINRES 439

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
             + + VS+AL+ MY+K G+I  A  +F    +++ V+WN+MI GY  HG+  +AL +F 
Sbjct: 440 FESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFN 499

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           EM    +   G+TF+ V+ AC+HAGLV EG + F  MV++H   P  EHY+CMVDL  RA
Sbjct: 500 EMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRA 559

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLS 676
           G L+KA+D I +MP      VW  +L AC              +L  L P +   YVLLS
Sbjct: 560 GNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLS 619

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N+Y+A  ++ E A VR ++  RK+ K  G + IEV N  + F +GD SHPQ+  IY+ LE
Sbjct: 620 NIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLE 679

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           +L+ ++++AG++ +T   L D+++E KE ++  HSE+LAIAFGL+ +  G  ++I+KNLR
Sbjct: 680 KLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLITSEPGTEIRIIKNLR 739

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VC DCH   K ISK+  R IVVRD NRFHHFK+G+CSCGDYW
Sbjct: 740 VCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 781



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 179/360 (49%), Gaps = 1/360 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ V +N ++    ++S   EA+ +F  + + G+    +T+++VL     L
Sbjct: 161 RKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAEL 220

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G  + C  +K GF     V T L  LY +   +E  R +F  + + ++VS+ +++
Sbjct: 221 QDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMI 280

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY  N   +  + LF  + V G K NS +   ++ V    G +     +H    K+G  
Sbjct: 281 SGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVV 340

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             +SV  AL ++Y +   +  AR +FD   ++   +WN+M++GY  N L  +A   F  M
Sbjct: 341 SNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEM 400

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                     T  S++  CA    L L + +H  + +   + +  + T L+  Y+KCG +
Sbjct: 401 QKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSI 460

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A ++FSMM E K+ V+W AMISG+  +G    A+N F +M    V P G T+  +L A
Sbjct: 461 TEAQRLFSMMPE-KNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYA 519



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF +  Q + V YN ++  Y  ++  + ++ LF  +   G  +  S++  ++      F 
Sbjct: 264 LFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVF-FPFG 322

Query: 94  HV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           H+   R +H  C KSG   + +VST+L  +Y R N +E  R +FD+ +E ++ SW +++S
Sbjct: 323 HLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMIS 382

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GYA+N + ++ + LF  MQ   ++PN  T +++L   A  G ++    VH ++ +   E 
Sbjct: 383 GYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFES 442

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  ALI MY K   + +A+ +F  M +++++TWN+M++GY  +    EA   FN M 
Sbjct: 443 NIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEML 502

Query: 273 LAGAELTRSTFVSVIKLCATTKELR 297
            +    T  TF+SV+  C+    +R
Sbjct: 503 HSRVSPTGVTFLSVLYACSHAGLVR 527



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 210/486 (43%), Gaps = 79/486 (16%)

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G   TR+ F+++I   +T  +L    Q H+Q++ NG+  D    T L    S    ++ A
Sbjct: 5   GIASTRNLFLTLINRVSTLHQLN---QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQA 61

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYS-IILTAQ 392
           S +FS +    D+  +  +I     N +   AV+ +  + +   + P+ FTY+ +I  A 
Sbjct: 62  SLLFSTIPN-PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGAS 120

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                  +HAH I   +     VG+A++  Y K   +  A KVF+ + E+D V W+ M++
Sbjct: 121 SLGLGLLLHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVS 180

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ----GKQFHACSIK 508
           G  +    + A+ I+  +   G+      F S   A   P  A  Q    G      ++K
Sbjct: 181 GLVKNSCFDEAILIFGDMVKGGIG-----FDSTTVAAVLPGVAELQDLALGMGIQCLAMK 235

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
              ++   V + L  +YSK G IE+A  +F +  + DLVS+N+MI GY  +  T+ ++ +
Sbjct: 236 VGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRL 295

Query: 569 FKEMRRQDLEFDGITFIGVI-----------TACTHA----------------------- 594
           FKE+     + +  + +G+I           T C H                        
Sbjct: 296 FKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSR 355

Query: 595 -GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM------PFAA 647
              ++  +  FD    +     ++  ++ M+  Y++ G+ EKA+ +   M      P   
Sbjct: 356 LNEIESARLLFDESSEK-----SLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPV 410

Query: 648 SATVWRTVLAACR-------------LISLQPHDSAIYV--LLSNMYAATGHWQERARVR 692
           + T   ++L+AC              LI+ +  +S I+V   L +MYA  G   E  R+ 
Sbjct: 411 TVT---SILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLF 467

Query: 693 KLMNDR 698
            +M ++
Sbjct: 468 SMMPEK 473


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/830 (32%), Positives = 445/830 (53%), Gaps = 39/830 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGC 90
           +S FD    +N  ++N ++  Y R+ L+ E L +F+  I +  L     T   V+K C  
Sbjct: 140 RSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAG 199

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           + D   G  VH   VK+G   D+ V  +LV  Y     V D  ++FD M E N+VSW S+
Sbjct: 200 ISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSM 259

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +  ++ N  +   +            P+  T  TVL V A E  +     VH   +K   
Sbjct: 260 IRVFSDNGDDGAFM------------PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSL 307

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    V NAL+ MY K   + D++ +F    +++ ++WN+MV G+         F+    
Sbjct: 308 DKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQ 367

Query: 271 MGLAGAELTRS---TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           M LAG+E  ++   T ++ + +C     L   ++LH   LK    +D  +    + +Y+K
Sbjct: 368 M-LAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAK 426

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +  A ++F  +R  K + SW A+I G+ Q+    L+++   QM   G+ P+ FT   
Sbjct: 427 CGSLSYAQRVFHGIRS-KTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCS 485

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+A   +       +VH  II+   E+   V  ++L+ Y+  G L     +F+ +++  
Sbjct: 486 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNS 545

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA-PSAAVEQGKQF 502
           +V+W+ ++ G+ Q G  E A+ ++RQ+   G++P   +  +V  AC+  PS  +  G++ 
Sbjct: 546 LVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPS--LRLGREA 603

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           HA ++K  L +   ++ +++ MY+K G I  +S+VF   +++   SWN+MI GY  HG  
Sbjct: 604 HAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRA 663

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           K+A+++F+EM+R     D +TF+GV+TAC H+GL+ EG +Y D M +   + P ++HY+C
Sbjct: 664 KEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYAC 723

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           ++D+  RAG L+ A+ +   M       +W ++L+ CR              L  L+P  
Sbjct: 724 VIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEK 783

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
              YVLLSN+YA  G W +  +VR+ M +  ++K+AG SWIE+  K +SF+ G+      
Sbjct: 784 PENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGF 843

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            +I S    L  ++   GY+PDTS V  D+ +E K   L  HSE+LAI +GL+ T  G  
Sbjct: 844 EEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTT 903

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L++ KNLR+C DCH   KLISK+  R+IVVRD  RFHHF +G CSCGDYW
Sbjct: 904 LRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 169/622 (27%), Positives = 306/622 (49%), Gaps = 44/622 (7%)

Query: 48  RLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKS 107
           R++ E+  D   + + ++FL +R          L  +L+  G   D   GR++H     S
Sbjct: 64  RVVQEFAGDD--ESSSDVFLLVRE--------ALGLLLQASGKRKDIEMGRKIHHLVSGS 113

Query: 108 GFARDVNV-STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
              R  +V  T ++ +Y    + +D R  FD +   N+  W +++S Y+RN++   VLE+
Sbjct: 114 TRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEM 173

Query: 167 FHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           F +M  +  + P++FTF  V+   A    V   + VH +V+K G      V NAL+S Y 
Sbjct: 174 FIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYG 233

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR-STFV 284
               V DA  +FD M +R+ ++WNSM+               F++ G  GA +   +T V
Sbjct: 234 THGFVSDALKLFDIMPERNLVSWNSMI-------------RVFSDNGDDGAFMPDVATVV 280

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           +V+ +CA  +E+ + + +H   +K  +D +  +   LM  YSK G + D+  IF  +   
Sbjct: 281 TVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFK-LNNN 339

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMT--REGVRPNGFTYSIILTAQP-----AVSP 397
           K+VVSW  M+ G    G I    +   QM    E V+ +  T   IL A P     +V P
Sbjct: 340 KNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVT---ILNAVPVCFDESVLP 396

Query: 398 F--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              ++H + +K  +     +  A + +Y K G L  A +VF  I  K + +W+A++ GYA
Sbjct: 397 SLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYA 456

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q  D   ++  + Q+ + G+ P+ FT  S+++AC+    ++  GK+ H   I+  L   L
Sbjct: 457 QSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLK-SLRLGKEVHGFIIRNWLERDL 515

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V  +++++Y   G + +   +F       LVSWN++I G+ Q+G  ++AL +F++M   
Sbjct: 516 FVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLY 575

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-MVDLYSRAGMLE 634
            ++  GI+ + V  AC+    +  G++     +   H+       +C ++D+Y++ G + 
Sbjct: 576 GIQPCGISMMTVFGACSLLPSLRLGREAHAYALK--HLLEDNAFIACSIIDMYAKNGAIT 633

Query: 635 KAMDIINRMPFAASATVWRTVL 656
           ++  + N +    SA  W  ++
Sbjct: 634 QSSKVFNGLK-EKSAASWNAMI 654


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 282/808 (34%), Positives = 435/808 (53%), Gaps = 23/808 (2%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           N L+ E C     ++AL     ++ L + +   T  ++L+ C        G +VH    K
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           +     V +  +L+ +++R  ++ +   VF  M E ++ SW  L+ GYA+    D  L L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           +HRM   GI+P+ +TF  VL        +A   +VH  VI+ G E    V NALI+MY+K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              +  AR VFD M  RD I+WN+M++GY  N++ +E    F  M     +    T  SV
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           I  C    + RL R++H  V+K G   + ++   L+  +S  G  ++A  +FS M E KD
Sbjct: 303 ISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKM-EFKD 361

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHA 402
           +VSWTAMISG+ +NG  + AV  +  M  EGV P+  T + +L+A   +        +H 
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE 421

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
              +T       V  +L++ Y K   +D+A +VF  I  K++++W++++ G      +  
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFE 481

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+  ++Q+    +KPN  T  SV++AC A   A+  GK+ HA +++  L     + +AL+
Sbjct: 482 ALFFFQQMILS-LKPNSVTLVSVLSAC-ARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY + G +E A   F    K D+ SWN ++ GYAQ G    A+E+F +M   D+  D I
Sbjct: 540 DMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEI 598

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           TF  ++ AC+ +G+V +G +YF+ M ++ HI P ++HY+ +VDL  RAG LE A + I +
Sbjct: 599 TFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKK 658

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MP      +W  +L ACR              +  +       Y+LL N+YA +G W E 
Sbjct: 659 MPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEV 718

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
           ARVRK+M + ++  + G SW+EV  + ++FL GD  HPQ  +I + LE    +++  G  
Sbjct: 719 ARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLS 778

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
                   DID    E I   HSERLAIAFGL+ T  G P+ + KNL +C +CH  +K I
Sbjct: 779 MSKDSRRDDIDASKAE-IFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFI 837

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGD 836
           SK+ RR I VRDT +FHHFK+G+CSCGD
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 259/525 (49%), Gaps = 8/525 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F +  +R+   +N L+  Y +     EALNL+  +  +G+     T   VL+TCG L D
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR+VH   ++ GF  DV+V  +L+ +Y++  ++   R VFD M   + +SW +++SG
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISG 270

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N +    L LF  M+   + P+  T ++V+      G      +VH  VIK G    
Sbjct: 271 YFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            SV N+LI M+       +A  VF  ME +D ++W +M++GY  N L  +A ET+  M  
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G      T  SV+  CA    L     LH    + G+     +   L+  YSKC  ++ 
Sbjct: 391 EGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDK 450

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  +   K+V+SWT++I G   N     A+ FF QM    ++PN  T   +L+A  
Sbjct: 451 ALEVFHRIPN-KNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACA 508

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +       ++HAH ++T       +  ALL+ YV+ G ++ A   F    EKD+ +W+ 
Sbjct: 509 RIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC-EKDVASWNI 567

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +L GYAQ G    AV+++ ++    V P+E TF+S++ AC+      +  + F +   K 
Sbjct: 568 LLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKF 627

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
            +   L   +++V +  + G +E A E  K+     D   W +++
Sbjct: 628 HIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/705 (36%), Positives = 398/705 (56%), Gaps = 86/705 (12%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N ++S + K+  +  AR VFD +   DS++W +M+ GY    L   A   F  M  +G  
Sbjct: 83  NTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGIS 142

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T+ TF +V+  CA  + L + +++HS V+K G      +   L+  Y+KCG    A  +
Sbjct: 143 PTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVV 202

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT----------------------- 374
           F  MR +KD  +W  MIS H+Q    DLA+  F QMT                       
Sbjct: 203 FDRMR-LKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRA 261

Query: 375 ---------REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG----- 416
                       ++P+ FT   +L+A           Q+HAHI++ + + + +VG     
Sbjct: 262 LETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALIS 321

Query: 417 ----------------------------TALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                                       T+LL+ Y K G +D A  +F+ +  +D+VAW+
Sbjct: 322 MYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWT 381

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM+ GYAQ G    A+ ++R +  EG KPN +T ++V++  ++  A+++ GKQ HA +I+
Sbjct: 382 AMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISS-LASLDHGKQLHAVAIR 440

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALE 567
            +  +++ V +AL+TMYS+ G+I+ A ++F      RD ++W SMI   AQHG   +A+E
Sbjct: 441 LEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIE 500

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F++M R +L+ D IT++GV++ACTH GLV++G+ YF++M N H+I PT  HY+CM+DL 
Sbjct: 501 LFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLL 560

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            RAG+LE+A + I  MP       W ++L++CR              L+ + P++S  Y+
Sbjct: 561 GRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYL 620

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
            L+N  +A G W++ A+VRK M D+ VKKE G+SW+++KNK + F   D  HPQ + IY 
Sbjct: 621 ALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYC 680

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
            + ++   +K  G+ PDT+ VL D++ E KE IL  HSE+LAIAF L+ TP    ++I+K
Sbjct: 681 MISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMK 740

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVC DCH+ I+ IS L  R+I+VRD  RFHHFK+G CSC DYW
Sbjct: 741 NLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 225/490 (45%), Gaps = 71/490 (14%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  PQ + V +  ++  Y    L + A++ FL +   G+     T ++VL +C     
Sbjct: 101 VFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQA 160

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN------VEDGRR------------- 134
              G++VH   VK G +  V V+ SL+++Y +  +      V D  R             
Sbjct: 161 LDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISM 220

Query: 135 ------------VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFT 181
                       +FD M + ++VSW S+++GY     + R LE F  M +   +KP+ FT
Sbjct: 221 HMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFT 280

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR---------- 231
             +VL   A+   +    Q+H  +++   ++  +V NALISMY KS  V           
Sbjct: 281 LGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITG 340

Query: 232 -----------------------DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                                   ARA+FD ++ RD + W +M+ GY  N L  +A   F
Sbjct: 341 TPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLF 400

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G +    T  +V+ + ++   L   +QLH+  ++       ++   L+  YS+ 
Sbjct: 401 RLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRS 460

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++DA KIF+ +   +D ++WT+MI    Q+G  + A+  F +M R  ++P+  TY  +
Sbjct: 461 GSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGV 520

Query: 389 LTAQPAVSPFQ---VHAHIIKT--NYEKSFSVGTALLNAYVKKGILDEAAK-VFELIDEK 442
           L+A   V   +    + +++K   N E + S    +++   + G+L+EA   +  +  E 
Sbjct: 521 LSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEP 580

Query: 443 DIVAWSAMLA 452
           D+VAW ++L+
Sbjct: 581 DVVAWGSLLS 590



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 169/375 (45%), Gaps = 46/375 (12%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGCL 91
           +LFD+    + V +N ++  YC       AL  F   ++   L     TL SVL  C   
Sbjct: 232 ALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANR 291

Query: 92  FDHVFGRQVHCECVK--------------SGFAR-------------------DVNVSTS 118
                G+Q+H   V+              S +A+                   +V   TS
Sbjct: 292 ESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTS 351

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+D Y +  +++  R +FD +   +VV+WT+++ GYA+N +    L LF  M  EG KPN
Sbjct: 352 LLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPN 411

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           ++T + VL V++    +    Q+H + I+       SV NALI+MY +S  ++DAR +F+
Sbjct: 412 NYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFN 471

Query: 239 GM-EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
            +   RD++TW SM+     + L  EA E F  M     +    T+V V+  C     + 
Sbjct: 472 HICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVE 531

Query: 298 LARQLHSQVLKNGIDFDHNIRTG------LMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
             +  +  ++KN     HNI         ++    + G +E+A      M    DVV+W 
Sbjct: 532 QGKS-YFNLMKNV----HNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWG 586

Query: 352 AMISGHLQNGAIDLA 366
           +++S    +  +DLA
Sbjct: 587 SLLSSCRVHKYVDLA 601



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 115/226 (50%), Gaps = 5/226 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD    R+ V +  ++  Y ++ L  +AL LF  + R G      TL++VL     L
Sbjct: 366 RAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSL 425

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVSWTSL 150
                G+Q+H   ++      V+V  +L+ +Y R+ +++D R++F+ + +  + ++WTS+
Sbjct: 426 ASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSM 485

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN-- 208
           +   A++ + +  +ELF +M    +KP+  T+  VL      G+V    + +  ++KN  
Sbjct: 486 ILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQG-KSYFNLMKNVH 544

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
             E  +S    +I +  ++ ++ +A      M  + D + W S+++
Sbjct: 545 NIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLS 590


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/751 (34%), Positives = 434/751 (57%), Gaps = 23/751 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           QSLFD  P+R+ V +N LL  Y  + ++++++ +F+ +R L +P   +T S VLK C  +
Sbjct: 92  QSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGI 151

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D+  G QVHC  ++ GF  DV   ++LVD+Y +   ++   R+F +M E N+V W++++
Sbjct: 152 EDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVI 211

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +N      L+LF  M   G+  +  T+++V    A         Q+H   +K+   
Sbjct: 212 AGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFA 271

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             + +  A + MY K   + DA  VF+ + +    ++N+++ GY   +  ++A E F ++
Sbjct: 272 YDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSL 331

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                     +    +  C+  K      QLH   +K G+ F+  +   ++  Y KCG +
Sbjct: 332 QRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGAL 391

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A  IF  M E +D VSW A+I+ H QN  I   ++ F  M R  + P+ FTY  ++ A
Sbjct: 392 VEACTIFDDM-ERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450

Query: 392 ---QPAVS-PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              Q A++   ++H  I+K+     + VG+AL++ Y K G+L EA K+ + ++EK  V+W
Sbjct: 451 CAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSW 510

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +++++G++    +E A + + Q+   GV P+ FT+++V++ C A  A +E GKQ HA  +
Sbjct: 511 NSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVC-ANMATIELGKQIHAQIL 569

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K  L++ + ++S LV MYSK GN++ +  +F++  KRD V+W++MIC YA HGH ++A++
Sbjct: 570 KLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIK 629

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F+EM+  +++ +   FI V+ AC H G VD+G  YF IM + + + P MEHYSCMVDL 
Sbjct: 630 LFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLL 689

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            R+  + +A+ +I  M F A   +WRT+L+ C+              L+ L P DS+ YV
Sbjct: 690 GRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYV 749

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LL+N+YA  G W E A++R +M + K+KKE G SWIEV+++ ++FL GD +HP+S +IY 
Sbjct: 750 LLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYE 809

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           +   L   +K AGY PD   +L   D+E +E
Sbjct: 810 QTHLLVDEMKWAGYVPDIDSML---DEEVEE 837



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 167/614 (27%), Positives = 295/614 (48%), Gaps = 39/614 (6%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-- 137
           T S +L+ C  L     G+Q H + + + F   + V+  LV  Y +++N+    +VFD  
Sbjct: 8   TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67

Query: 138 -----------------------------DMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
                                         M E +VVSW SLLS Y  N +N + +E+F 
Sbjct: 68  PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           RM+   I  +  TFS VL   +        +QVH + I+ G E      +AL+ MY K K
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            +  A  +F  M +R+ + W++++AGYV N+  +E  + F +M   G  +++ST+ SV +
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            CA     +L  QLH   LK+   +D  I T  +  Y+KC +M DA K+F+ +       
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPN-PPRQ 306

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHI 404
           S+ A+I G+ +      A+  F  + R  +  +  + S  LTA   +       Q+H   
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLA 366

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K     +  V   +L+ Y K G L EA  +F+ ++ +D V+W+A++A + Q  +    +
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTL 426

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++  +    ++P++FT+ SV+ AC A   A+  G + H   +K+ +     V SALV M
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKAC-AGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDM 485

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K G +  A ++  R  ++  VSWNS+I G++    ++ A   F +M    +  D  T+
Sbjct: 486 YGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTY 545

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             V+  C +   ++ G+Q     + + +++  +   S +VD+YS+ G ++ +  +  + P
Sbjct: 546 ATVLDVCANMATIELGKQ-IHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP 604

Query: 645 FAASATVWRTVLAA 658
                T W  ++ A
Sbjct: 605 KRDYVT-WSAMICA 617



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 245/516 (47%), Gaps = 43/516 (8%)

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           FTFS +L   ++   +    Q H  +I         V N L+  Y KS  +  A  VFD 
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 240 MEDRDSITWNSMVAG-------------------------------YVTNELHMEAFETF 268
           M  RD I+WN+M+ G                               Y+ N ++ ++ E F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M         +TF  V+K C+  ++  L  Q+H   ++ G + D    + L+  YSKC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            K++ A +IF  M E +++V W+A+I+G++QN      +  F  M + G+  +  TY+ +
Sbjct: 187 KKLDGAFRIFREMPE-RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
             +   +S F    Q+H H +K+++     +GTA L+ Y K   + +A KVF  +     
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
            +++A++ GYA+      A++I++ L    +  +E + S  + AC+     +E G Q H 
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE-GIQLHG 364

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
            ++K  L   +CV++ ++ MY K G +  A  +F    +RD VSWN++I  + Q+    K
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SC 622
            L +F  M R  +E D  T+  V+ AC     ++ G +    +V        ++ +  S 
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGM---GLDWFVGSA 481

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +VD+Y + GML +A  I +R+    + + W ++++ 
Sbjct: 482 LVDMYGKCGMLMEAEKIHDRLEEKTTVS-WNSIISG 516



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 231/458 (50%), Gaps = 18/458 (3%)

Query: 27  YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           Y+K D+      +F+  P      YN ++  Y R     +AL +F  ++R  L     +L
Sbjct: 284 YAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISL 343

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           S  L  C  +  H+ G Q+H   VK G   ++ V+ +++D+Y +   + +   +FDDM  
Sbjct: 344 SGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMER 403

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            + VSW ++++ + +N+   + L LF  M    ++P+ FT+ +V+   A +  +   +++
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  ++K+G  +   V +AL+ MY K  M+ +A  + D +E++ +++WNS+++G+ + +  
Sbjct: 464 HGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQS 523

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
             A   F+ M   G      T+ +V+ +CA    + L +Q+H+Q+LK  +  D  I + L
Sbjct: 524 ENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTL 583

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  YSKCG M+D+  +F    + +D V+W+AMI  +  +G  + A+  F +M    V+PN
Sbjct: 584 VDMYSKCGNMQDSRLMFEKTPK-RDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPN 642

Query: 382 GFTYSIILTA-------QPAVSPFQV-HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
              +  +L A          +  FQ+  +H     + + +S    LL    +   ++EA 
Sbjct: 643 HTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLG---RSDQVNEAL 699

Query: 434 KVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           K+ E +  E D V W  +L+     G+ E A K +  L
Sbjct: 700 KLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSL 737



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 42/215 (19%)

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           +FTFS ++  C+   A +  GKQ HA  I       + V++ LV  Y K  N+  A +VF
Sbjct: 6   KFTFSHILQKCSNLKA-LNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVF 64

Query: 539 KRQRKRDLVSWNSMICGYAQ-------------------------------HGHTKKALE 567
            R   RD++SWN+MI GYA+                               +G  +K++E
Sbjct: 65  DRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSCM 623
           +F  MR   +  D  TF  V+ AC+  G+ D G     + V+   I    E+     S +
Sbjct: 125 IFVRMRSLKIPHDYATFSVVLKACS--GIEDYG---LGLQVHCLAIQMGFENDVVTGSAL 179

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           VD+YS+   L+ A  I   MP   +   W  V+A 
Sbjct: 180 VDMYSKCKKLDGAFRIFREMP-ERNLVCWSAVIAG 213


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/636 (38%), Positives = 374/636 (58%), Gaps = 48/636 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NAL+S Y KS  +++ +A FD M  RDS+++N+ +AG+  N    E+ E F  M   G E
Sbjct: 93  NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T  T VS++   A   +LR  +Q+H  ++      +  I   L   Y+KCG++E A  +
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  + + K++VSW  MISG+ +NG  +  +    QM   G  P+  T S I+ A      
Sbjct: 213 FDCLTK-KNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA------ 265

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
                                    Y + G +DEA +VF    EKDIV W+AM+ GYA+ 
Sbjct: 266 -------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKN 300

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G  E A+ ++ ++  E ++P+ +T SSV+++C A  A++  G+  H  SI A LNN L V
Sbjct: 301 GREEDALLLFNEMLLEHIEPDSYTLSSVVSSC-AKLASLHHGQAVHGKSILAGLNNNLLV 359

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           SSAL+ MYSK G I+ A  VF     R++VSWN+MI G AQ+GH K ALE+F+ M +Q  
Sbjct: 360 SSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF 419

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D +TFIG+++AC H   +++GQ+YFD + N+H + PT++HY+CMV+L  R G +E+A+
Sbjct: 420 KPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAV 479

Query: 638 DIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATG 683
            +I  M       +W T+L+ C               L  L P  +  Y++LSNMYA+ G
Sbjct: 480 ALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMG 539

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W++ A VR LM  + VKK AG+SWIE+ N+ + F + D +HP+S  IY KL  L  +L+
Sbjct: 540 RWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQ 599

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG-APLQIVKNLRVCGDCH 802
           + G+ P+T+ VL D+ ++ K   +  HSE+LA+AFGL+  P G +P++I+KN+R+C DCH
Sbjct: 600 EEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCH 659

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             +K  S++  R I++RD+NRFHHF  G CSC D W
Sbjct: 660 EFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 220/449 (48%), Gaps = 43/449 (9%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD     +L+  Y ++ ++++ +  FD M   + VS+ + ++G++ N      LELF RM
Sbjct: 87  RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRM 146

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           Q EG +P  +T  ++L   A    +    Q+H  +I         + NAL  MY K   +
Sbjct: 147 QREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI 206

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             AR +FD +  ++ ++WN M++GY  N    +     + M L+G    + T  ++I   
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII--- 263

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
                                            AY +CG++++A ++FS  +E KD+V W
Sbjct: 264 --------------------------------AAYCQCGRVDEARRVFSEFKE-KDIVCW 290

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
           TAM+ G+ +NG  + A+  F +M  E + P+ +T S ++++   ++       VH   I 
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSIL 350

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
                +  V +AL++ Y K G +D+A  VF L+  +++V+W+AM+ G AQ G  + A+++
Sbjct: 351 AGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALEL 410

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMY 525
           +  +  +  KP+  TF  +++AC   +  +EQG++ F + S +  +   L   + +V + 
Sbjct: 411 FENMLQQKFKPDNVTFIGILSACLHCN-WIEQGQEYFDSISNQHGMTPTLDHYACMVNLL 469

Query: 526 SKKGNIESASEVFKRQ-RKRDLVSWNSMI 553
            + G IE A  + K      D + W++++
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLL 498



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 211/452 (46%), Gaps = 56/452 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++ FDR P R+ V YN  +  +  +S  QE+L LF  ++R G      T+ S+L     L
Sbjct: 109 KATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQL 168

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  +G+Q+H   +   F  +V +  +L D+Y +   +E  R +FD + + N+VSW  ++
Sbjct: 169 LDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMI 228

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+N   ++ + L H+M++ G  P+  T ST+                          
Sbjct: 229 SGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI-------------------------- 262

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                    I+ Y +   V +AR VF   +++D + W +M+ GY  N    +A   FN M
Sbjct: 263 ---------IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEM 313

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L   E    T  SV+  CA    L   + +H + +  G++ +  + + L+  YSKCG +
Sbjct: 314 LLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFI 373

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA  +F++M   ++VVSW AMI G  QNG    A+  F  M ++  +P+  T+  IL+A
Sbjct: 374 DDARSVFNLM-PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGT------------ALLNAYVKKGILDEA-AKVFEL 438
                   +H + I+   E   S+               ++N   + G +++A A +  +
Sbjct: 433 -------CLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNM 485

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
             + D + WS +L+  +  GD   A    R L
Sbjct: 486 AHDPDFLIWSTLLSICSTKGDIVNAEVAARHL 517


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 299/836 (35%), Positives = 456/836 (54%), Gaps = 60/836 (7%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF-- 92
           FD    +N V +N ++  Y +    + A  +F  ++  G      T  S++ T   L   
Sbjct: 163 FDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEP 222

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D     Q+ C   KSGF  D+ V + LV  + ++ ++   R++F+ M   N V+   L+ 
Sbjct: 223 DVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMV 282

Query: 153 GYARNKMNDRVLELFHRMQ-VEGIKPNSFTF---STVLGVLADEGIVATAVQVHTMVIKN 208
           G  R K  +   +LF  M  +  + P S+     S     LA+E  +    +VH  VI  
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342

Query: 209 G-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           G  + +  + N L++MY K   + DAR VF  M ++DS++WNSM+ G   N   +EA E 
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVER 402

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           + +M          T +S I  CA+ K  +L +Q+H + LK GID + ++   LM  Y++
Sbjct: 403 YQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL--AVNFFCQMTREGVRPNGFTY 385
            G + +  KIFS M E  D VSW ++I G L +    L  AV  F    R G + N  T+
Sbjct: 463 TGCLNECRKIFSSMPE-HDQVSWNSII-GALASSERSLPEAVACFLNALRAGQKLNRITF 520

Query: 386 SIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           S +L+A  ++S      Q+H   +K N     +   AL+  Y K G +D   K+F  + E
Sbjct: 521 SSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSE 580

Query: 442 K-DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           + D V W++M++GY        A+ +   +   G + + F +++V++A  A  A +E+G 
Sbjct: 581 RRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSA-FASVATLERGM 639

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           + HACS++A L + + V SALV MYSK G ++ A   F           N+M        
Sbjct: 640 EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF-----------NTM-------- 680

Query: 561 HTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
                  +F  M+       D +TF+GV++AC+HAGL++EG ++F+ M + + + P +EH
Sbjct: 681 ------PLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEH 734

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----------------RLIS 663
           +SCM DL  RAG L+K  D I +MP   +  +WRTVL AC                 L  
Sbjct: 735 FSCMADLLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQ 794

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           L+P ++  YVLL NMYAA G W++  + RK M D  VKKEAGYSW+ +K+  + F+AGD 
Sbjct: 795 LEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDK 854

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
           SHP ++ IY KL+EL+ +++DAGY P T + L D++ E+KE ILS HSE+LA+AF L A 
Sbjct: 855 SHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQ 914

Query: 784 PAGA-PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +   P++I+KNLRVCGDCH+  K ISK+E R I++RD+NRFHHF++G CSC D+W
Sbjct: 915 RSSTLPIRIMKNLRVCGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSDFW 970



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 188/639 (29%), Positives = 312/639 (48%), Gaps = 31/639 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P RN V +  ++  Y R+  H+EAL     + + G+        S L+ C  L
Sbjct: 56  RKVFDEMPLRNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQEL 115

Query: 92  FDHV---FGRQVHCECVKSGFARDVNVSTSLVDLYMRT-NNVEDGRRVFDDMNESNVVSW 147
            D V   FGRQ+H    K  +A D  VS  L+ +Y +   ++    R FDD+   N VSW
Sbjct: 116 -DSVGILFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSW 174

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD--EGIVATAVQVHTMV 205
            S++S Y++        ++F+ MQ +G +P  +TF +++       E  V    Q+   +
Sbjct: 175 NSIISVYSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI 234

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
            K+G      V + L+S + KS  +  AR +F+ ME R+++T N ++ G V  +   EA 
Sbjct: 235 QKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294

Query: 266 ETFNNMGLAGAELTRSTFVSVIK-----LCATTKELRLARQLHSQVLKNG-IDFDHNIRT 319
           + F +M  +  +++  ++V ++        A    L+  R++H  V+  G +DF   I  
Sbjct: 295 KLFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           GL+  Y+KCG + DA ++F  M E KD VSW +MI+G  QN     AV  +  M R  + 
Sbjct: 354 GLVNMYAKCGSIADARRVFCFMTE-KDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEIL 412

Query: 380 PNGFTY----SIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P  FT     S   + + A    Q+H   +K   + + SV  AL+  Y + G L+E  K+
Sbjct: 413 PGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKI 472

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDT-EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           F  + E D V+W++++   A    +   AV  +      G K N  TFSSV++A ++ S 
Sbjct: 473 FSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSF 532

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMI 553
             E GKQ H  ++K  + +     +AL+  Y K G ++   ++F R   +RD V+WNSMI
Sbjct: 533 G-ELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMI 591

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            GY  +    KAL++   M +     D   +  V++A      ++ G +     V+   +
Sbjct: 592 SGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGME-----VHACSV 646

Query: 614 YPTMEH----YSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
              +E      S +VD+YS+ G L+ A+   N MP  A+
Sbjct: 647 RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPLFAN 685



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 161/586 (27%), Positives = 287/586 (48%), Gaps = 22/586 (3%)

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           C+      +  H    K+G  +DV +  +L++ Y+ T +    R+VFD+M   N VSW  
Sbjct: 13  CIGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWAC 72

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV--QVHTMVIK 207
           ++SGY+RN  +   L     M  EG+  N + F + L    +   V      Q+H ++ K
Sbjct: 73  VVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFK 132

Query: 208 NGGEVVTSVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
               V   V N LISMY K    +  A   FD ++ ++S++WNS+++ Y        AF+
Sbjct: 133 LSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFK 192

Query: 267 TFNNMGLAGAELTRSTFVSVIKL-CATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            F +M   G+  T  TF S++   C+ T+ ++RL  Q+   + K+G   D  + +GL+ A
Sbjct: 193 MFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSA 252

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGF 383
           ++K G +  A KIF+ M E ++ V+   ++ G ++    + A   F  M     V P   
Sbjct: 253 FAKSGSLIHARKIFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-- 309

Query: 384 TYSIILTAQPAVS---------PFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAA 433
           +Y I+L++ P  S           +VH H+I T   +    +G  L+N Y K G + +A 
Sbjct: 310 SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR 369

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF  + EKD V+W++M+ G  Q      AV+ Y+ +    + P  FT  S I++C +  
Sbjct: 370 RVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLK 429

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            A + G+Q H  S+K  ++  + VS+AL+T+Y++ G +    ++F    + D VSWNS+I
Sbjct: 430 WA-KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSII 488

Query: 554 CGYAQHGHT-KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
              A    +  +A+  F    R   + + ITF  V++A +     + G+Q   + + +++
Sbjct: 489 GALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL-KYN 547

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           I       + ++  Y + G ++    I +RM        W ++++ 
Sbjct: 548 IADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISG 593


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/747 (34%), Positives = 432/747 (57%), Gaps = 21/747 (2%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +LFD  P  + V +N L+  YC+  + QE+++LF+ + R G+    +T + +LK+C  L 
Sbjct: 146 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 205

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           +   G QVH   VK+G   DV   ++LVD+Y +  +++D    F  M E N VSW + ++
Sbjct: 206 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 265

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N+   R LELF  MQ  G+  +  ++++     A    + T  Q+H   IKN    
Sbjct: 266 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 325

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  A++ +Y K+  + DAR  F G+ +    T N+M+ G V   L +EA   F  M 
Sbjct: 326 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 385

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +       +   V   CA TK     +Q+H   +K+G D D  +   ++  Y KC  + 
Sbjct: 386 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 445

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  IF  M++ KD VSW A+I+   QNG  D  +  F +M R G++P+ FTY  +L A 
Sbjct: 446 EAYLIFQGMKQ-KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 504

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            A+   +    VH  +IK+       V + +++ Y K GI+DEA K+ + I  + +V+W+
Sbjct: 505 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 564

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+L+G++   ++E A K + ++   G+KP+ FTF++V++ C A  A +E GKQ H   IK
Sbjct: 565 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC-ANLATIELGKQIHGQIIK 623

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            ++ +   +SS LV MY+K G++  +  VF++  KRD VSWN+MICGYA HG   +AL +
Sbjct: 624 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 683

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M+++++  +  TF+ V+ AC+H GL D+G +YF +M   + + P +EH++CMVD+  
Sbjct: 684 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 743

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           R+   ++A+  IN MPF A A +W+T+L+ C++              + L P DS++Y+L
Sbjct: 744 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 803

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA +G W + +R R+L+   ++KKE G SWIEV+++ + FL GD +HP+S ++Y  
Sbjct: 804 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 863

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDE 761
           L +L   +K +GY+PD++  ++ +D+E
Sbjct: 864 LNDLIGEMKLSGYEPDSASFVE-VDEE 889



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 277/539 (51%), Gaps = 11/539 (2%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD     +++  Y    ++     +FD M + +VVSW +L+SGY +  M    ++LF  M
Sbjct: 123 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 182

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              G+ P+  TF+ +L   +    ++  VQVH + +K G E+     +AL+ MY K + +
Sbjct: 183 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 242

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            DA   F GM +R+ ++W + +AG V NE ++   E F  M   G  +++ ++ S  + C
Sbjct: 243 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 302

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A    L   RQLH+  +KN    D  + T ++  Y+K   + DA + F  +     V + 
Sbjct: 303 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPN-HTVETS 361

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
            AM+ G ++ G    A+  F  M R  +R +  + S + +A      +    QVH   IK
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           + ++    V  A+L+ Y K   L EA  +F+ + +KD V+W+A++A   Q G  +  +  
Sbjct: 422 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 481

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + ++   G+KP++FT+ SV+ AC A   ++E G   H   IK+ L +   V+S +V MY 
Sbjct: 482 FNEMLRFGMKPDDFTYGSVLKACAALR-SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYC 540

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G I+ A ++  R   + +VSWN+++ G++ +  +++A + F EM    L+ D  TF  
Sbjct: 541 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 600

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKAMDIINRM 643
           V+  C +   ++ G+Q    ++ +  +    + Y  S +VD+Y++ G +  ++ +  ++
Sbjct: 601 VLDTCANLATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDSLLVFEKV 656



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q L DR   +  V +N +L  +  +   +EA   F  +  +GL     T ++VL TC  L
Sbjct: 549 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 608

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H + +K     D  +S++LVD+Y +  ++ D   VF+ + + + VSW +++
Sbjct: 609 ATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMI 668

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGG 210
            GYA + +    L +F RMQ E + PN  TF  VL   +  G+     +  H M      
Sbjct: 669 CGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKL 728

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           E        ++ +  +SK  ++A    + M    D++ W ++++
Sbjct: 729 EPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/747 (34%), Positives = 432/747 (57%), Gaps = 21/747 (2%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +LFD  P  + V +N L+  YC+  + QE+++LF+ + R G+    +T + +LK+C  L 
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 163

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           +   G QVH   VK+G   DV   ++LVD+Y +  +++D    F  M E N VSW + ++
Sbjct: 164 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 223

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N+   R LELF  MQ  G+  +  ++++     A    + T  Q+H   IKN    
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  A++ +Y K+  + DAR  F G+ +    T N+M+ G V   L +EA   F  M 
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +       +   V   CA TK     +Q+H   +K+G D D  +   ++  Y KC  + 
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 403

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  IF  M++ KD VSW A+I+   QNG  D  +  F +M R G++P+ FTY  +L A 
Sbjct: 404 EAYLIFQGMKQ-KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 462

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            A+   +    VH  +IK+       V + +++ Y K GI+DEA K+ + I  + +V+W+
Sbjct: 463 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 522

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+L+G++   ++E A K + ++   G+KP+ FTF++V++ C A  A +E GKQ H   IK
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC-ANLATIELGKQIHGQIIK 581

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            ++ +   +SS LV MY+K G++  +  VF++  KRD VSWN+MICGYA HG   +AL +
Sbjct: 582 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 641

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M+++++  +  TF+ V+ AC+H GL D+G +YF +M   + + P +EH++CMVD+  
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 701

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           R+   ++A+  IN MPF A A +W+T+L+ C++              + L P DS++Y+L
Sbjct: 702 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 761

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA +G W + +R R+L+   ++KKE G SWIEV+++ + FL GD +HP+S ++Y  
Sbjct: 762 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 821

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDE 761
           L +L   +K +GY+PD++  ++ +D+E
Sbjct: 822 LNDLIGEMKLSGYEPDSASFVE-VDEE 847



 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 277/539 (51%), Gaps = 11/539 (2%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD     +++  Y    ++     +FD M + +VVSW +L+SGY +  M    ++LF  M
Sbjct: 81  RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              G+ P+  TF+ +L   +    ++  VQVH + +K G E+     +AL+ MY K + +
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            DA   F GM +R+ ++W + +AG V NE ++   E F  M   G  +++ ++ S  + C
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 260

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A    L   RQLH+  +KN    D  + T ++  Y+K   + DA + F  +     V + 
Sbjct: 261 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPN-HTVETS 319

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
            AM+ G ++ G    A+  F  M R  +R +  + S + +A      +    QVH   IK
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           + ++    V  A+L+ Y K   L EA  +F+ + +KD V+W+A++A   Q G  +  +  
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + ++   G+KP++FT+ SV+ AC A   ++E G   H   IK+ L +   V+S +V MY 
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALR-SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYC 498

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G I+ A ++  R   + +VSWN+++ G++ +  +++A + F EM    L+ D  TF  
Sbjct: 499 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 558

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKAMDIINRM 643
           V+  C +   ++ G+Q    ++ +  +    + Y  S +VD+Y++ G +  ++ +  ++
Sbjct: 559 VLDTCANLATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDSLLVFEKV 614



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q L DR   +  V +N +L  +  +   +EA   F  +  +GL     T ++VL TC  L
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H + +K     D  +S++LVD+Y +  ++ D   VF+ + + + VSW +++
Sbjct: 567 ATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMI 626

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGG 210
            GYA + +    L +F RMQ E + PN  TF  VL   +  G+     +  H M      
Sbjct: 627 CGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKL 686

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           E        ++ +  +SK  ++A    + M    D++ W ++++
Sbjct: 687 EPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 284/823 (34%), Positives = 449/823 (54%), Gaps = 67/823 (8%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF-----ARDVNVSTSLVDLYMRTNNV 129
           P+  ++ S +L  C  L +    +Q+HC+ +K G      A ++N    L+   ++   +
Sbjct: 22  PITRNSSSKLLVNCKTLKEL---KQLHCDMMKKGLLCHKPASNLN---KLIASSVQIGTL 75

Query: 130 ED---GRRVF--DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           E     R  F  DD N +++  +  L+ GYA   + D+ + L+ +M V GI P+ +TF  
Sbjct: 76  ESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPF 135

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           +L   +    ++  VQVH  V+K G E    V N+LI  Y +   V   R +FDGM +R+
Sbjct: 136 LLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERN 195

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++W S++ GY   +L  EA   F  MG AG E    T V VI  CA  K+L L +++ S
Sbjct: 196 VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCS 255

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            + + G++    +   L+  Y KCG +  A +IF      K++V +  ++S ++ +    
Sbjct: 256 YISELGMELSTIMVNALVDMYMKCGDICAARQIFDECAN-KNLVMYNTIMSNYVHHEWAS 314

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALL 420
             +    +M ++G RP+  T    + A   +    V    HA++++   E   ++  A++
Sbjct: 315 DVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAII 374

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE------------------- 461
           + Y+K G  + A KVFE +  K +V W++++AG  + GD E                   
Sbjct: 375 DMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNT 434

Query: 462 ------------GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
                        A++++R++ ++G+  +  T   + +AC     A++  K       K 
Sbjct: 435 MIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASAC-GYLGALDLAKWVCTYIEKN 493

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            ++  L + +ALV M+S+ G+  SA  VFKR  KRD+ +W + I   A  G+T+ A+E+F
Sbjct: 494 DIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELF 553

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            EM  Q ++ D + F+ ++TAC+H G VD+G+Q F  M   H I P + HY CMVDL  R
Sbjct: 554 NEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGR 613

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG+LE+A+D+I  MP   +  VW ++LAACR              L  L P    I+VLL
Sbjct: 614 AGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLL 673

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN+YA+ G W + ARVR  M ++ V+K  G S IEV+   + F +GD SH ++  I   L
Sbjct: 674 SNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLML 733

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           EE++ RL +AGY PDT+ VL D+D++ KE +LS+HSE+LA+A+GL+ T  G P+++VKNL
Sbjct: 734 EEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNL 793

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+C DCH+  KL+SKL  R+I VRD NR+H FKEG CSC DYW
Sbjct: 794 RMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 274/557 (49%), Gaps = 39/557 (7%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           YN L+  Y    L  +A+ L++ +  +G+     T   +L  C  +     G QVH   +
Sbjct: 98  YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K G   D+ VS SL+  Y     V+ GR++FD M E NVVSWTSL++GY+   ++   + 
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVS 217

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           LF +M   G++PN  T   V+   A    +    +V + + + G E+ T + NAL+ MY+
Sbjct: 218 LFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYM 277

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   +  AR +FD   +++ + +N++++ YV +E   +     + M   G    + T +S
Sbjct: 278 KCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLS 337

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
            I  CA   +L + +  H+ VL+NG++   NI   ++  Y KCGK E A K+F  M   K
Sbjct: 338 TIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPN-K 396

Query: 346 DVVSWTAMISGHLQNGAIDL-------------------------------AVNFFCQMT 374
            VV+W ++I+G +++G ++L                               A+  F +M 
Sbjct: 397 TVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQ 456

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
            +G+  +  T   I +A   +        V  +I K +      +GTAL++ + + G   
Sbjct: 457 NQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPS 516

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            A  VF+ ++++D+ AW+A +   A  G+TEGA++++ ++  + VKP++  F +++ AC+
Sbjct: 517 SAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACS 576

Query: 491 APSAAVEQGKQFHACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVS 548
               +V+QG+Q      KA  +   +     +V +  + G +E A ++ +    + + V 
Sbjct: 577 H-GGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVV 635

Query: 549 WNSMICGYAQHGHTKKA 565
           W S++    +H + + A
Sbjct: 636 WGSLLAACRKHKNVELA 652



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 211/494 (42%), Gaps = 71/494 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD   +RN V +  L+  Y    L +EA++LF  +   G+     T+  V+  C  L
Sbjct: 185 RKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKL 244

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G++V     + G      +  +LVD+YM+  ++   R++FD+    N+V + +++
Sbjct: 245 KDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIM 304

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y  ++    VL +   M  +G +P+  T  + +   A  G ++     H  V++NG E
Sbjct: 305 SNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLE 364

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN------------- 258
              ++ NA+I MY+K      A  VF+ M ++  +TWNS++AG V +             
Sbjct: 365 GWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEM 424

Query: 259 ------------------ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
                              +  EA E F  M   G    R T V +   C     L LA+
Sbjct: 425 LERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAK 484

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            + + + KN I  D  + T L+  +S+CG    A  +F  M E +DV +WTA I      
Sbjct: 485 WVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRM-EKRDVSAWTAAIGVMAME 543

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALL 420
           G  + A+  F +M  + V+P+   +                                ALL
Sbjct: 544 GNTEGAIELFNEMLEQKVKPDDVVF-------------------------------VALL 572

Query: 421 NAYVKKGILDEAAKVFELIDE-----KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
            A    G +D+  ++F  +++       IV +  M+    + G  E AV + + +    +
Sbjct: 573 TACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMP---I 629

Query: 476 KPNEFTFSSVINAC 489
           +PN+  + S++ AC
Sbjct: 630 EPNDVVWGSLLAAC 643


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/747 (34%), Positives = 432/747 (57%), Gaps = 21/747 (2%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +LFD  P  + V +N L+  YC+  + QE+++LF+ + R G+    +T + +LK+C  L 
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 163

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           +   G QVH   VK+G   DV   ++LVD+Y +  +++D    F  M E N VSW + ++
Sbjct: 164 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 223

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N+   R LELF  MQ  G+  +  ++++     A    + T  Q+H   IKN    
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  A++ +Y K+  + DAR  F G+ +    T N+M+ G V   L +EA   F  M 
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +       +   V   CA TK     +Q+H   +K+G D D  +   ++  Y KC  + 
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALM 403

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  IF  M++ KD VSW A+I+   QNG  D  +  F +M R G++P+ FTY  +L A 
Sbjct: 404 EAYLIFQGMKQ-KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 462

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            A+   +    VH  +IK+       V + +++ Y K GI+DEA K+ + I  + +V+W+
Sbjct: 463 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 522

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+L+G++   ++E A K + ++   G+KP+ FTF++V++ C A  A +E GKQ H   IK
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC-ANLATIELGKQIHGQIIK 581

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            ++ +   +SS LV MY+K G++  +  VF++  KRD VSWN+MICGYA HG   +AL +
Sbjct: 582 QEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRM 641

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M+++++  +  TF+ V+ AC+H GL D+G +YF +M   + + P +EH++CMVD+  
Sbjct: 642 FERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILG 701

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           R+   ++A+  IN MPF A A +W+T+L+ C++              + L P DS++Y+L
Sbjct: 702 RSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYIL 761

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA +G W + +R R+L+   ++KKE G SWIEV+++ + FL GD +HP+S ++Y  
Sbjct: 762 LSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEM 821

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDE 761
           L +L   +K +GY+PD++  ++ +D+E
Sbjct: 822 LNDLIGEMKLSGYEPDSASFVE-VDEE 847



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/539 (28%), Positives = 277/539 (51%), Gaps = 11/539 (2%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD     +++  Y    ++     +FD M + +VVSW +L+SGY +  M    ++LF  M
Sbjct: 81  RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              G+ P+  TF+ +L   +    ++  VQVH + +K G E+     +AL+ MY K + +
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            DA   F GM +R+ ++W + +AG V NE ++   E F  M   G  +++ ++ S  + C
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 260

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A    L   RQLH+  +KN    D  + T ++  Y+K   + DA + F  +     V + 
Sbjct: 261 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPN-HTVETS 319

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
            AM+ G ++ G    A+  F  M R  +R +  + S + +A      +    QVH   IK
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           + ++    V  A+L+ Y K   L EA  +F+ + +KD V+W+A++A   Q G  +  +  
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + ++   G+KP++FT+ SV+ AC A   ++E G   H   IK+ L +   V+S +V MY 
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALR-SLEYGLMVHDKVIKSGLGSDAFVASTVVDMYC 498

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G I+ A ++  R   + +VSWN+++ G++ +  +++A + F EM    L+ D  TF  
Sbjct: 499 KCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 558

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKAMDIINRM 643
           V+  C +   ++ G+Q    ++ +  +    + Y  S +VD+Y++ G +  ++ +  ++
Sbjct: 559 VLDTCANLATIELGKQIHGQIIKQEMLD---DEYISSTLVDMYAKCGDMPDSLLVFEKV 614



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q L DR   +  V +N +L  +  +   +EA   F  +  +GL     T ++VL TC  L
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H + +K     D  +S++LVD+Y +  ++ D   VF+ + + + VSW +++
Sbjct: 567 ATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMI 626

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGG 210
            GYA + +    L +F RMQ E + PN  TF  VL   +  G+     +  H M      
Sbjct: 627 CGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKL 686

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           E        ++ +  +SK  ++A    + M    D++ W ++++
Sbjct: 687 EPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 259/705 (36%), Positives = 396/705 (56%), Gaps = 86/705 (12%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N ++S Y K   + +A  VF+ M + DS++W +M+ GY        A   F  M      
Sbjct: 83  NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T+ T  +V+  CA  + L + R++HS V+K+G+    ++   L+  Y+K G    A  +
Sbjct: 143 PTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIV 202

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV------------------- 378
           F  M+ +K   SW  MIS H+Q+G +DLA   F QM    V                   
Sbjct: 203 FDRMK-LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREA 261

Query: 379 -------------RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG----- 416
                        +P+ FT +  L+A   +       Q+HAHII+T ++   +VG     
Sbjct: 262 LDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALIS 321

Query: 417 ----------------------------TALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                                       TALL+ YVK G ++ A ++F+ +  +D+VAW+
Sbjct: 322 MYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWT 381

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM+ GY Q G  + A++++R +  EG KPN +T ++ + + ++  A+++ G+Q HA + +
Sbjct: 382 AMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLAT-MLSVSSSLASLDHGRQIHASATR 440

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALE 567
           +   +++ VS+AL+TMY+K G+I  A  VF     KRD ++W SMI   AQHG  ++AL 
Sbjct: 441 SGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALT 500

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F+ M    ++ D IT++GV++ACTH GLV++G+ Y+++M N H I PT  HY+CM+DL+
Sbjct: 501 LFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLF 560

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
            RAG+L++A   I  MP       W ++LA+C              RL+ ++P +S  Y 
Sbjct: 561 GRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYS 620

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
            L+N+Y+A G W+  A +RK M D+ VKK+ G+SW+++KNK + F   D  HPQ + IY 
Sbjct: 621 ALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYE 680

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
            + ++   +K  G+ PDT  VL D+++E KE ILS HSE+LAIAFGL+ TP    L+I+K
Sbjct: 681 MMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMK 740

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVC DCH+ IK ISKL  R+I+VRD  RFHHFK GLCSC DYW
Sbjct: 741 NLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 227/495 (45%), Gaps = 81/495 (16%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P+ + V +  ++  Y +    + A+ +F  +    +P    TL++VL +C  +  
Sbjct: 101 VFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVEC 160

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN------------- 140
              GR+VH   VK G +  ++V+ SL+++Y ++ +    + VFD M              
Sbjct: 161 LGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISS 220

Query: 141 ------------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI-KPNSFT 181
                             E +VVSW +++SGY ++  +   L++F +M ++   KP+ FT
Sbjct: 221 HMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFT 280

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR---------- 231
            ++ L   A+   +    Q+H  +I+   +   +V NALISMY KS  V           
Sbjct: 281 LASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSM 340

Query: 232 -----------------------DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                                   AR +FD +  RD + W +M+ GYV N  + +A E F
Sbjct: 341 ISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELF 400

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +M   G +    T  +++ + ++   L   RQ+H+   ++G     ++   L+  Y+K 
Sbjct: 401 RSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKS 460

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G + DA  +F+++   +D ++WT+MI    Q+G  + A+  F +M   G++P+  TY  +
Sbjct: 461 GSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGV 520

Query: 389 LTAQPAVSPFQ---------VHAH-IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE- 437
           L+A   V   +          +AH II T      S    +++ + + G+L EA    E 
Sbjct: 521 LSACTHVGLVEQGRSYYNLMQNAHKIIPTP-----SHYACMIDLFGRAGLLQEAHAFIEN 575

Query: 438 LIDEKDIVAWSAMLA 452
           +  E D++AW ++LA
Sbjct: 576 MPIEPDVIAWGSLLA 590



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 210/476 (44%), Gaps = 103/476 (21%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDF---------DHNIRTG------------- 320
           + S ++     K+    + +H++++K G+           +   +TG             
Sbjct: 16  YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMP 75

Query: 321 ---------LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
                    ++  Y+K G++E+A ++F  M E  D VSWTAMI G+ Q G  + A+  F 
Sbjct: 76  VKSVFSWNIILSGYAKGGRLEEAHRVFEEMPE-PDSVSWTAMIVGYNQMGQFENAIGMFR 134

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK-- 425
           +M  + V P  FT + +L +  AV       +VH+ ++K       SV  +LLN Y K  
Sbjct: 135 EMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSG 194

Query: 426 -----------------------------KGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
                                         G++D A   FE + E+D+V+W+AM++GY Q
Sbjct: 195 DPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQ 254

Query: 457 IGDTEGAVKIY-RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
            G    A+ I+ + L     KP++FT +S ++AC A    ++ GKQ HA  I+ + +   
Sbjct: 255 HGFDREALDIFSKMLMDSSSKPDKFTLASALSAC-ANLENLKLGKQIHAHIIRTEFDTFG 313

Query: 516 CVSSALVTMYSKKGNIE---------------------------------SASEVFKRQR 542
            V +AL++MYSK G +E                                  A  +F   R
Sbjct: 314 AVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLR 373

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            RD+V+W +MI GY Q+G  + A+E+F+ M ++  + +  T   +++  +    +D G+Q
Sbjct: 374 VRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQ 433

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                    +   ++   + ++ +Y+++G +  A  + N + +      W +++ A
Sbjct: 434 IHASATRSGNA-SSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIA 488



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 175/382 (45%), Gaps = 58/382 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-------TLSSV 84
           Q  F++  +R+ V +N ++  Y +    +EAL++F  +      L  S       TL+S 
Sbjct: 231 QVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKM------LMDSSSKPDKFTLASA 284

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFAR--------------------------------- 111
           L  C  L +   G+Q+H   +++ F                                   
Sbjct: 285 LSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNL 344

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           DV   T+L+D Y++  ++   RR+FD +   +VV+WT+++ GY +N  N   +ELF  M 
Sbjct: 345 DVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMI 404

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
            EG KPN++T +T+L V +    +    Q+H    ++G     SV NALI+MY KS  + 
Sbjct: 405 KEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSIN 464

Query: 232 DARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           DAR VF+ +   RD+ITW SM+     + L  EA   F  M   G +    T+V V+  C
Sbjct: 465 DARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSAC 524

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNI------RTGLMVAYSKCGKMEDASKIFSMMREM 344
                +   R  ++ +++N     H I         ++  + + G +++A      M   
Sbjct: 525 THVGLVEQGRSYYN-LMQNA----HKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIE 579

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
            DV++W ++++    +  ++LA
Sbjct: 580 PDVIAWGSLLASCKVHKNVELA 601


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/804 (33%), Positives = 453/804 (56%), Gaps = 41/804 (5%)

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVE 130
           LG+        ++LK    L D   G+Q+H    K G+  D V V+ +LV+LY +  +  
Sbjct: 4   LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
              +VFD ++E N VSW SL+S     +  +  LE F  M  E ++P+SFT  +V+   +
Sbjct: 64  AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123

Query: 191 D----EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI 246
           +    EG++    QVH   ++ G E+ + + N L++MY K   +  ++ +      RD +
Sbjct: 124 NLPMPEGLM-MGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 181

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           TWN++++    NE  +EA E    M L G E    T  SV+  C+  + LR  ++LH+  
Sbjct: 182 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 241

Query: 307 LKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           LKNG +D +  + + L+  Y  C ++    ++F  M + K +  W AMI+G+ QN     
Sbjct: 242 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK-IGLWNAMIAGYSQNEHDKE 300

Query: 366 AVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALL 420
           A+  F  M    G+  N  T + ++ A      F     +H  ++K   ++   V   L+
Sbjct: 301 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 360

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV-----------KIYRQ 469
           + Y + G +D A ++F  ++++D+V W+ M+ GY      E A+           K+ + 
Sbjct: 361 DMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 420

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
            +   +KPN  T  +++ +C A SA + +GK+ HA +IK  L   + V SALV MY+K G
Sbjct: 421 ASRVSLKPNSITLMTILPSCAALSA-LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 479

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
            ++ + +VF +  ++++++WN +I  Y  HG+ ++A+++ + M  Q ++ + +TFI V  
Sbjct: 480 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 539

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS- 648
           AC+H+G+VDEG + F +M  ++ + P+ +HY+C+VDL  RAG +++A  ++N MP   + 
Sbjct: 540 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK 599

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A  W ++L A R              LI L+P+ ++ YVLL+N+Y++ G W +   VR+ 
Sbjct: 600 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 659

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M ++ V+KE G SWIE  ++ + F+AGD SHPQS ++   LE L  R++  GY PDTS V
Sbjct: 660 MKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 719

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L +++++ KE +L  HSE+LAIAFG++ T  G  +++ KNLRVC DCH   K ISK+  R
Sbjct: 720 LHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDR 779

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +I++RD  RFH FK G CSCGDYW
Sbjct: 780 EIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 258/514 (50%), Gaps = 34/514 (6%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-GEVVTSVCNALISMYLKSK 228
           M V GIKP+++ F  +L  +AD   +    Q+H  V K G G    +V N L+++Y K  
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
                  VFD + +R+ ++WNS+++   + E    A E F  M     E +  T VSV+ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 289 LCAT---TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
            C+     + L + +Q+H+  L+ G + +  I   L+  Y K GK+  +SK+       +
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLA-SSKVLLGSFGGR 178

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF------- 398
           D+V+W  ++S   QN  +  A+ +  +M  EGV P+ FT S +L   PA S         
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL---PACSHLEMLRTGK 235

Query: 399 QVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
           ++HA+ +K     E SF VG+AL++ Y     +    +VF+ + ++ I  W+AM+AGY+Q
Sbjct: 236 ELHAYALKNGSLDENSF-VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ 294

Query: 457 IGDTEGAVKIYRQL-TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
               + A+ ++  +  S G+  N  T + V+ AC   S A  + +  H   +K  L+   
Sbjct: 295 NEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR-SGAFSRKEAIHGFVVKRGLDRDR 353

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR-- 573
            V + L+ MYS+ G I+ A  +F +   RDLV+WN+MI GY    H + AL +  +M+  
Sbjct: 354 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 413

Query: 574 ---------RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
                    R  L+ + IT + ++ +C     + +G++     + ++++   +   S +V
Sbjct: 414 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI-KNNLATDVAVGSALV 472

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           D+Y++ G L+ +  + +++P   +   W  ++ A
Sbjct: 473 DMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMA 505



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 17/245 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-----------LGIRRLGLPLFGSTLS 82
           +F +   R+ V +N ++  Y     H++AL L             G  R+ L     TL 
Sbjct: 375 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 434

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           ++L +C  L     G+++H   +K+  A DV V ++LVD+Y +   ++  R+VFD + + 
Sbjct: 435 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 494

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV- 201
           NV++W  ++  Y  +      ++L   M V+G+KPN  TF +V    +  G+V   +++ 
Sbjct: 495 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 554

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD---SITWNSMV-AGYVT 257
           + M    G E  +     ++ +  ++  +++A  + + M  RD   +  W+S++ A  + 
Sbjct: 555 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSLLGASRIH 613

Query: 258 NELHM 262
           N L +
Sbjct: 614 NNLEI 618


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 255/717 (35%), Positives = 407/717 (56%), Gaps = 22/717 (3%)

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
           SN    + L++ Y +N       +++  M+    + ++F   +VL             +V
Sbjct: 87  SNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEV 146

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  V+KNG      VCNALI MY +   +  AR +FD +E++D ++W++M+  Y  + L 
Sbjct: 147 HGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLL 206

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--T 319
            EA +   +M +   + +    +S+  + A   +L+L + +H+ V++NG      +   T
Sbjct: 207 DEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCT 266

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC  +  A ++F  + +   ++SWTAMI+ ++    ++  V  F +M  EG+ 
Sbjct: 267 ALIDMYVKCENLAYARRVFDGLSK-ASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMF 325

Query: 380 PNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN  T   ++         ++    HA  ++  +  S  + TA ++ Y K G +  A  V
Sbjct: 326 PNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSV 385

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+    KD++ WSAM++ YAQ    + A  I+  +T  G++PNE T  S++  C A + +
Sbjct: 386 FDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMIC-AKAGS 444

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +E GK  H+   K  +   + + ++ V MY+  G+I++A  +F     RD+  WN+MI G
Sbjct: 445 LEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISG 504

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           +A HGH + ALE+F+EM    +  + ITFIG + AC+H+GL+ EG++ F  MV+E    P
Sbjct: 505 FAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTP 564

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------------- 661
            +EHY CMVDL  RAG+L++A ++I  MP   +  V+ + LAAC+L              
Sbjct: 565 KVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQF 624

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           +SL+PH S   VL+SN+YA+   W + A +R+ M D  + KE G S IEV    + F+ G
Sbjct: 625 LSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMG 684

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D  HP + ++Y  ++E+  +L+DAGY PD S VL +ID E K + L+ HSE+LA+A+GL+
Sbjct: 685 DREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLI 744

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +T  G P++IVKNLRVC DCH   KL+SK+  R+I+VRD NRFHHFKEG CSC DYW
Sbjct: 745 STAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 254/507 (50%), Gaps = 17/507 (3%)

Query: 49  LLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSG 108
           L+  Y +++   +A  ++  +R     +    + SVLK C  +   + G++VH   VK+G
Sbjct: 95  LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 109 FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
           F  DV V  +L+ +Y    ++   R +FD +   +VVSW++++  Y R+ + D  L+L  
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--GEVVTSVCNALISMYLK 226
            M V  +KP+     ++  VLA+   +     +H  V++NG  G+    +C ALI MY+K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
            + +  AR VFDG+     I+W +M+A Y+      E    F  M   G      T +S+
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           +K C T   L L + LH+  L+NG      + T  +  Y KCG +  A  +F   +  KD
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKS-KD 393

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHA 402
           ++ W+AMIS + QN  ID A + F  MT  G+RPN  T   +L         +    +H+
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHS 453

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           +I K   +    + T+ ++ Y   G +D A ++F    ++DI  W+AM++G+A  G  E 
Sbjct: 454 YIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEA 513

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HACSIKAKLNNALCV 517
           A++++ ++ + GV PN+ TF   ++AC+  S  +++GK+      H      K+ +  C 
Sbjct: 514 ALELFEEMEALGVTPNDITFIGALHACSH-SGLLQEGKRLFHKMVHEFGFTPKVEHYGC- 571

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKR 544
              +V +  + G ++ A E+ K    R
Sbjct: 572 ---MVDLLGRAGLLDEAHELIKSMPMR 595



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 19/433 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+   ++ V ++ ++  Y R  L  EAL+L   +  + +      + S+      L D
Sbjct: 181 LFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELAD 240

Query: 94  HVFGRQVHC------ECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              G+ +H       +C KSG    V + T+L+D+Y++  N+   RRVFD +++++++SW
Sbjct: 241 LKLGKAMHAYVMRNGKCGKSG----VPLCTALIDMYVKCENLAYARRVFDGLSKASIISW 296

Query: 148 TSLLSGYAR-NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           T++++ Y   N +N+ V  LF +M  EG+ PN  T  +++      G +     +H   +
Sbjct: 297 TAMIAAYIHCNNLNEGV-RLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTL 355

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           +NG  +   +  A I MY K   VR AR+VFD  + +D + W++M++ Y  N    EAF+
Sbjct: 356 RNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFD 415

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F +M   G      T VS++ +CA    L + + +HS + K GI  D  ++T  +  Y+
Sbjct: 416 IFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYA 475

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
            CG ++ A ++F+   + +D+  W AMISG   +G  + A+  F +M   GV PN  T+ 
Sbjct: 476 NCGDIDTAHRLFAEATD-RDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFI 534

Query: 387 IILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             L A       Q      H  + +  +         +++   + G+LDEA ++ + +  
Sbjct: 535 GALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPM 594

Query: 442 K-DIVAWSAMLAG 453
           + +I  + + LA 
Sbjct: 595 RPNIAVFGSFLAA 607



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 104/217 (47%), Gaps = 1/217 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FD    ++ + ++ ++  Y +++   EA ++F+ +   G+     T+ S+L  C   
Sbjct: 383 RSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKA 442

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ +H    K G   D+ + TS VD+Y    +++   R+F +  + ++  W +++
Sbjct: 443 GSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMI 502

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGG 210
           SG+A +   +  LELF  M+  G+ PN  TF   L   +  G++    ++ H MV + G 
Sbjct: 503 SGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGF 562

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
                    ++ +  ++ ++ +A  +   M  R +I 
Sbjct: 563 TPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIA 599



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 26/264 (9%)

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+H H IKT+   S+ V  A L +Y     +                  S ++  Y +  
Sbjct: 61  QLHGHFIKTSSNCSYRVPLAALESYSSNAAIH-----------------SFLITSYIKNN 103

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-APSAAVEQGKQFHACSIKAKLNNALCV 517
               A KIY  +     + + F   SV+ AC   PS  +  G++ H   +K   +  + V
Sbjct: 104 CPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLL--GQEVHGFVVKNGFHGDVFV 161

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE---MRR 574
            +AL+ MYS+ G++  A  +F +   +D+VSW++MI  Y + G   +AL++ ++   MR 
Sbjct: 162 CNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRV 221

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           +  E   I+   V+       L      Y  +M N       +   + ++D+Y +   L 
Sbjct: 222 KPSEIGMISITHVLAELADLKLGKAMHAY--VMRNGKCGKSGVPLCTALIDMYVKCENLA 279

Query: 635 KAMDIINRMPFAASATVWRTVLAA 658
            A  + + +   AS   W  ++AA
Sbjct: 280 YARRVFDGLS-KASIISWTAMIAA 302


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/786 (35%), Positives = 433/786 (55%), Gaps = 26/786 (3%)

Query: 75  PLFG---STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
           P F    S  SS+L        HV  + +H + +K+  + +  ++  L+ +Y     +  
Sbjct: 40  PFFNQAPSVFSSLLHQFSNTLIHV--KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGH 97

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
            R VFD  +        ++++G+ RN+ +  V  LF  M    I+ NS+T    L    D
Sbjct: 98  ARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTD 157

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
                  +++    ++ G  +   V +++++  +K   + DA+ VFDGM ++D + WNS+
Sbjct: 158 LLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSI 217

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           + GYV   L  E+ + F  M   G   +  T  +++K C  +   ++    HS VL  G+
Sbjct: 218 IGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGM 277

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
             D  + T L+  YS  G    A+ +F  M   + ++SW AMISG++QNG I  +   F 
Sbjct: 278 GNDVFVLTSLVDMYSNLGDTGSAALVFDSMCS-RSLISWNAMISGYVQNGMIPESYALFR 336

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           ++ + G   +  T   ++      S  +    +H+ II+   E    + TA+++ Y K G
Sbjct: 337 RLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCG 396

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            + +A  VF  + +K+++ W+AML G +Q G  E A+K++ Q+  E V  N  T  S+++
Sbjct: 397 AIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVH 456

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDL 546
            C A   ++ +G+  HA  I+        ++SAL+ MY+K G I SA ++F  +   +D+
Sbjct: 457 CC-AHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDV 515

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           +  NSMI GY  HGH + AL V+  M  + L+ +  TF+ ++TAC+H+GLV+EG+  F  
Sbjct: 516 ILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHS 575

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------ 660
           M  +H + P  +HY+C+VDL+SRAG LE+A +++ +MPF  S  V   +L+ CR      
Sbjct: 576 MERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTN 635

Query: 661 --------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                   LISL   +S IYV+LSN+YA    W+    +R LM  + +KK  GYS IEV 
Sbjct: 636 MGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVG 695

Query: 713 NKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSE 772
           NK Y+F A D SHP    IY  LE L   ++  GY PDTS VL+D+++  K  +L  HSE
Sbjct: 696 NKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSE 755

Query: 773 RLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLC 832
           RLAIAFGL++TP G+ ++I KNLRVC DCH V K ISK+ +R+I+VRD NRFHHF  G C
Sbjct: 756 RLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKC 815

Query: 833 SCGDYW 838
           SC D+W
Sbjct: 816 SCNDFW 821



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 276/560 (49%), Gaps = 13/560 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD+         N ++  + R+  H E   LF  +    + +   T    LK C  L
Sbjct: 99  RNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDL 158

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G ++    V+ GF   + V +S+V+  ++   + D ++VFD M E +VV W S++
Sbjct: 159 LDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSII 218

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY +  +    +++F  M   G++P+  T + +L      G+    +  H+ V+  G  
Sbjct: 219 GGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMG 278

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  +L+ MY        A  VFD M  R  I+WN+M++GYV N +  E++  F  +
Sbjct: 279 NDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRL 338

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G+     T VS+I+ C+ T +L   R LHS +++  ++    + T ++  YSKCG +
Sbjct: 339 VQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAI 398

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A+ +F  M + K+V++WTAM+ G  QNG  + A+  FCQM  E V  N  T   ++  
Sbjct: 399 KQATIVFGRMGK-KNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHC 457

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVA 446
              +        VHAH I+  Y     + +AL++ Y K G +  A K+F      KD++ 
Sbjct: 458 CAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVIL 517

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHAC 505
            ++M+ GY   G    A+ +Y ++  E +KPN+ TF S++ AC+  S  VE+GK  FH+ 
Sbjct: 518 CNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSH-SGLVEEGKALFHSM 576

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR---QRKRDLVSWNSMICGYAQHGHT 562
                +       + LV ++S+ G +E A E+ K+   Q   D++   +++ G   H +T
Sbjct: 577 ERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVL--EALLSGCRTHKNT 634

Query: 563 KKALEVFKEMRRQDLEFDGI 582
              +++   +   D    GI
Sbjct: 635 NMGIQIADRLISLDYLNSGI 654



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 178/365 (48%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y    Q +FD  P+++ V +N ++  Y +  L  E++ +FL +   GL     T++++LK
Sbjct: 195 YLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLK 254

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            CG       G   H   +  G   DV V TSLVD+Y    +      VFD M   +++S
Sbjct: 255 ACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLIS 314

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +++SGY +N M      LF R+   G   +S T  +++   +    +     +H+ +I
Sbjct: 315 WNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCII 374

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           +   E    +  A++ MY K   ++ A  VF  M  ++ ITW +M+ G   N    +A +
Sbjct: 375 RKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALK 434

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M          T VS++  CA    L   R +H+  +++G  FD  I + L+  Y+
Sbjct: 435 LFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYA 494

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCGK+  A K+F+    +KDV+   +MI G+  +G    A+  + +M  E ++PN  T+ 
Sbjct: 495 KCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFV 554

Query: 387 IILTA 391
            +LTA
Sbjct: 555 SLLTA 559



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 85/168 (50%), Gaps = 1/168 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+   +F R  ++N + +  +L    ++   ++AL LF  ++   +     TL S++  C
Sbjct: 399 KQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCC 458

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF-DDMNESNVVSW 147
             L     GR VH   ++ G+A D  ++++L+D+Y +   +    ++F ++ +  +V+  
Sbjct: 459 AHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILC 518

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            S++ GY  +      L ++ RM  E +KPN  TF ++L   +  G+V
Sbjct: 519 NSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLV 566


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 289/838 (34%), Positives = 440/838 (52%), Gaps = 80/838 (9%)

Query: 76  LFGSTLSSVLKTCGCLFDH----VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
            F ST SS       LF           +H + +  G   D    T ++ +Y+  N+   
Sbjct: 20  FFFSTASSTTDLTSTLFHQCKSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAK 76

Query: 132 GRRVFDDMNESN--VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL 189
              V   ++ S+  V  W  L+         + VL+L+ RMQ  G +P+ +TF  VL   
Sbjct: 77  ALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKAC 136

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR---DSI 246
            +         VH +V  +G E    V N L+SMY +     +AR VFD M +R   D +
Sbjct: 137 GEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLV 196

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGL-AGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           +WNS+VA Y+     + A + F  M    G      + V+V+  CA+       +Q+H  
Sbjct: 197 SWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGY 256

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
            L++G+  D  +   ++  Y+KCG ME+A+K+F  M+ +KDVVSW AM++G+ Q G  D 
Sbjct: 257 ALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK-VKDVVSWNAMVTGYSQIGRFDD 315

Query: 366 AVNFFCQMTREGVRPNGFTYSIILT----------------------AQPAVSPF----- 398
           A+  F ++  E +  N  T+S ++                       ++P V        
Sbjct: 316 ALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLS 375

Query: 399 ------------QVHAHIIK-------TNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
                       + H H IK        +      V  AL++ Y K      A  +F+LI
Sbjct: 376 GCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLI 435

Query: 440 DEKD--IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG--VKPNEFTFSSVINACTAPSAA 495
             KD  +V W+ ++ G AQ G+   A++++ Q+      V PN FT S  + AC A   A
Sbjct: 436 PPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMAC-ARLGA 494

Query: 496 VEQGKQFHACSIKAKLNNA-LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           +  G+Q HA  ++ +  +A L V++ L+ MYSK G++++A  VF    +R+ VSW S++ 
Sbjct: 495 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 554

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY  HG  ++AL++F EM++  L  DG+TF+ V+ AC+H+G+VD+G  YF+ M  +  + 
Sbjct: 555 GYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVV 614

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  EHY+CMVDL SRAG L++AM++I  MP   +  VW  +L+ACR              
Sbjct: 615 PGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQ 674

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L+ L+  +   Y LLSN+YA    W++ AR+R LM +  +KK  G SW++ +  T +F A
Sbjct: 675 LLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFA 734

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           GD SHP S QIY  L +L  R+K  GY PD  + L D+DDE K  +LS+HSE+LA+A+G+
Sbjct: 735 GDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGI 794

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + T  GAP++I KNLR CGDCH+    IS +   +I+VRD++RFHHFK G CSC  YW
Sbjct: 795 LTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 261/549 (47%), Gaps = 56/549 (10%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           +N+L+         ++ L L+  ++RLG      T   VLK CG +     G  VH    
Sbjct: 94  WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV---VSWTSLLSGYARNKMNDR 162
            SGF  +V V   LV +Y R    E+ R+VFD+M E  V   VSW S+++ Y +   + R
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213

Query: 163 VLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
            +++F RM  + GI+P++ +   VL   A  G  +   QVH   +++G      V NA++
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMV----------------------------- 252
            MY K  M+ +A  VF+ M+ +D ++WN+MV                             
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333

Query: 253 ------AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
                 AGY    L  EA + F  M L G+E    T VS++  CA    L   ++ H   
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHA 393

Query: 307 LKNGIDFDHN-------IRTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHL 358
           +K  ++ D N       +   L+  YSKC   + A  +F ++    + VV+WT +I G+ 
Sbjct: 394 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 453

Query: 359 QNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKS 412
           Q+G  + A+  F QM +    V PN FT S  L A   +       Q+HA++++  +E +
Sbjct: 454 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 513

Query: 413 -FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              V   L++ Y K G +D A  VF+ + +++ V+W++++ GY   G  E A++I+ ++ 
Sbjct: 514 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 573

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
             G+ P+  TF  V+ AC+  S  V+QG   F+  +    +       + +V + S+ G 
Sbjct: 574 KVGLVPDGVTFVVVLYACSH-SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGR 632

Query: 531 IESASEVFK 539
           ++ A E+ +
Sbjct: 633 LDEAMELIR 641



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 231/511 (45%), Gaps = 81/511 (15%)

Query: 32  QSLFDRSPQR---NFVEYNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKT 87
           + +FD   +R   + V +N ++  Y +      A+ +F  +   LG+     +L +VL  
Sbjct: 181 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPA 240

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  +     G+QVH   ++SG   DV V  ++VD+Y +   +E+  +VF+ M   +VVSW
Sbjct: 241 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 300

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            ++++GY++    D  L LF +++ E I+ N  T+S V+   A  G+   A+ V   +  
Sbjct: 301 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRL 360

Query: 208 NGGE--VVT----------------------------------------SVCNALISMYL 225
            G E  VVT                                         V NALI MY 
Sbjct: 361 CGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYS 420

Query: 226 KSKMVRDARAVFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           K K  + ARA+FD +  +DR  +TW  ++ G   +    EA E F+ M      +  + F
Sbjct: 421 KCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 480

Query: 284 VSVIKL--CATTKELRLARQLHSQVLKNGID----FDHNIRTGLMVAYSKCGKMEDASKI 337
                L  CA    LR  RQ+H+ VL+N  +    F  N    L+  YSK G ++ A  +
Sbjct: 481 TISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANC---LIDMYSKSGDVDAARVV 537

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M + ++ VSWT++++G+  +G  + A+  F +M + G+ P+G T+ ++L A      
Sbjct: 538 FDNMHQ-RNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACS---- 592

Query: 398 FQVHAHIIK--TNY----EKSFSVGTA------LLNAYVKKGILDEAAKVFELIDEKDIV 445
              H+ ++    NY     K F V         +++   + G LDEA ++   +  K   
Sbjct: 593 ---HSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTP 649

Query: 446 A-WSAMLAG---YAQIGDTEGAVKIYRQLTS 472
           A W A+L+    YA +   E A     +L S
Sbjct: 650 AVWVALLSACRVYANVELGEYAANQLLELES 680



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 10/196 (5%)

Query: 23  RSPFYSKKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLF 77
           +SP   K  +++FD  P   R+ V +  L+    +     EAL LF   L      +P  
Sbjct: 423 KSP---KAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMP-N 478

Query: 78  GSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVF 136
             T+S  L  C  L    FGRQ+H   +++ F +  + V+  L+D+Y ++ +V+  R VF
Sbjct: 479 AFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVF 538

Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           D+M++ N VSWTSL++GY  +   +  L++F+ MQ  G+ P+  TF  VL   +  G+V 
Sbjct: 539 DNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVD 598

Query: 197 TAVQVHTMVIKNGGEV 212
             +     + K+ G V
Sbjct: 599 QGINYFNGMNKDFGVV 614


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 293/834 (35%), Positives = 454/834 (54%), Gaps = 50/834 (5%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-----GLPLFGSTLSSVLKTCGCLFDHVF 96
           +  ++N LL +  R   H +AL +   + RL     G+     TL   LK+C        
Sbjct: 29  SLPQWNGLLADLSRAGRHADALAI---LPRLLAASDGVAPDRFTLPPALKSC----RGDD 81

Query: 97  GRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           GRQVH    K G A  D  V  SLV +Y R   V+D  +VF+ M   N+VSW +L++  A
Sbjct: 82  GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA 141

Query: 156 RNKMNDRVLELFHRMQVEGI----KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             +   R LELF R  +E +     P+  T  TVL + A      T   VH + +K+G +
Sbjct: 142 DPR---RGLELF-RDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWD 197

Query: 212 VVTSVCNALISMYLKSKMVRDARAVF---DGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
               V N L+ MY K   + DA   F        R+ ++WN M+ GY  N     AF   
Sbjct: 198 AAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLL 257

Query: 269 NNMGLA--GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAY 325
             M +   G      T +SV+ +C+   EL   R+LH+ V++ G+    + +   L+ AY
Sbjct: 258 REMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAY 317

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFT 384
            +CG +  A ++F  +   K V SW A+I  H QNG    A+  F +MT   G +P+ F+
Sbjct: 318 GRCGCLLHACRVFDGICS-KMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFS 376

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
              +L A   +         H  I++   EK   +  +LL+ Y++ G    A  +F+ ++
Sbjct: 377 IGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVE 436

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQ 498
           EKD V+W+ M+AGY+Q G    +++++R++ S+  G  P+    +S + AC+    AV  
Sbjct: 437 EKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSE-LPAVRL 495

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           GK+ H  ++KA L     +SS+++ MYSK G+++ A   F R + +D VSW  MI GYA 
Sbjct: 496 GKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAV 555

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           +G  K+A+ ++ +M R+ +E DG T++G++ AC HAG++++G  +F  M N   I   +E
Sbjct: 556 NGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLE 615

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISL 664
           HY+C++ + SRAG    A+ ++  MP    A +  +VL+AC              +L+ L
Sbjct: 616 HYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLEL 675

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
           +PH +  YVL SNMYA +  W E  +VRK++ D  V KE G SWI++  K YSF+AG+ S
Sbjct: 676 EPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENS 735

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
            P+ +++      L  +++ AGY PDT+ +L ++++E K   L  HSE+ AIAFGL+ T 
Sbjct: 736 LPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTA 795

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
               +++ KN+R+C DCH   KLISK+  R+IVVRD  RFHHF++GLCSCGDYW
Sbjct: 796 GPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/827 (31%), Positives = 441/827 (53%), Gaps = 22/827 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF   PQRN V +  ++     +   +EAL  +  +R+ G+    + L++V+  CG L
Sbjct: 99  QRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGAL 158

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V G QV    V SG    V+V+ SL+ ++     V+D  R+FD M E + +SW +++
Sbjct: 159 EDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMI 218

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y+  ++  +   +   M+   +KP+  T  +++ V A   +VA    +H++ + +G  
Sbjct: 219 SMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLH 278

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + NAL++MY  +  + +A ++F  M  RD I+WN+M++ YV +   +EA ET   +
Sbjct: 279 CSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL 338

Query: 272 GLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
                    S TF S +  C++ + L   R +H+ +L+  +     I   L+  YSKC  
Sbjct: 339 LQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNS 398

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           MED  ++F  M    DVVS   +  G+     +  A+  F  M   G++PN  T   +  
Sbjct: 399 MEDTERVFESM-PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQG 457

Query: 391 AQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
              ++         +HA++ +T       +  +L+  Y   G L+ +  +F  I+ K ++
Sbjct: 458 TCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVI 517

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+A++A   + G  E A+K++      G K + F  +  +++ +A  A++E+G Q H  
Sbjct: 518 SWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSS-SANLASLEEGMQLHGL 576

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           S+K  L+    V +A + MY K G ++   +       R    WN++I GYA++G+ K+A
Sbjct: 577 SVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEA 636

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
            + FK M     + D +TF+ +++AC+HAGL+D+G  Y++ M     + P ++H  C+VD
Sbjct: 637 EDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVD 696

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           L  R G   +A   I+ MP   +  +WR++L++ R              L+ L P D + 
Sbjct: 697 LLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSA 756

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLLSN+YA    W +  ++R  M   K+ K    SW+++KN+  +F  GD SH  + +I
Sbjct: 757 YVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKI 816

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           Y KL+E+  +L++ GY  DTS  L D D+E KE  L  HSE+LA+A+GL+  P G+ ++I
Sbjct: 817 YVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRI 876

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVC DCH V KL+S +  R+IV+RD  RFH FK G CSC D+W
Sbjct: 877 FKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 166/638 (26%), Positives = 316/638 (49%), Gaps = 31/638 (4%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GCLFDHV 95
           P R    +   +    R  L   A  L   +R   +PL G  L+S++  C   G      
Sbjct: 2   PHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAA 61

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G  +H    ++G   +V + T+L+ LY     V + +R+F +M + NVVSWT+++   +
Sbjct: 62  CGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALS 121

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEV 212
            N   +  L  + RM+ EG+  N+   +TV+   G L DE      +QV   V+ +G   
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDE---VAGLQVTAHVVVSGLLT 178

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             SV N+LI+M+   + V+DA  +FD ME+RD I+WN+M++ Y   E++ + F   ++M 
Sbjct: 179 HVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR 238

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               +   +T  S++ +CA++  + L   +HS  + +G+     +   L+  YS  GK++
Sbjct: 239 HGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLD 298

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM--TREGVRPNGFTYSIILT 390
           +A  +F  M   +DV+SW  MIS ++Q+ +   A+    Q+  T EG  PN  T+S  L 
Sbjct: 299 EAESLFRNMSR-RDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-PPNSMTFSSALG 356

Query: 391 A----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A    +  ++   +HA I++ + +    +G +LL  Y K   +++  +VFE +   D+V+
Sbjct: 357 ACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVS 416

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            + +  GYA + D   A++++  +   G+KPN  T  ++   C +       G   HA  
Sbjct: 417 CNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            +  L +   ++++L+TMY+  G++ES++ +F R   + ++SWN++I    +HG  ++A+
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAI 536

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV------NEHHIYPTMEHY 620
           ++F + +    + D       +++  +   ++EG Q   + V      + H +  TM   
Sbjct: 537 KLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATM--- 593

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
               D+Y + G ++  +  +   P       W T+++ 
Sbjct: 594 ----DMYGKCGKMDCMLKTLPD-PAHRPTQCWNTLISG 626


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 264/723 (36%), Positives = 408/723 (56%), Gaps = 33/723 (4%)

Query: 143 NVVSWTSLLSGYARN---KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           + V+WT ++  +A     + +D V  LF  M  EG+ P+  T +TVL +    G  A A+
Sbjct: 98  DAVTWTVMIGAFASAPGARASDAV-SLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAI 156

Query: 200 ---QVHTMVIKNG---GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
               +H   +K G     VV  VCN L+  Y K  ++  AR VF  M  RDS+T+N+M+ 
Sbjct: 157 IIASLHPFALKLGLLHSNVV--VCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMM 214

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           G      H EA + F  M   G   TR TF +V+ +     +L L RQ+H  V +     
Sbjct: 215 GCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSS 273

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           +  +   L+  YSKC  +++  K+F  M E +D VS+  MI+G+  N    + +  F +M
Sbjct: 274 NVFVNNSLLDFYSKCDCLDEMKKLFHEMIE-RDNVSYNVMIAGYAWNRCASIVLRLFREM 332

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
                      Y+ +L+   +V       Q+HA ++         VG AL++ Y K G+L
Sbjct: 333 QSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGML 392

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           D A   F   ++K  V+W+AM+ G  Q G  E A++++  +   G+ P+  TFSS I A 
Sbjct: 393 DAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKA- 451

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
           ++  A +  G+Q H+  I++   +++   SAL+ MY+K G ++ A + F    +R+ +SW
Sbjct: 452 SSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISW 511

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           N++I  YA +G  K A+++F+ M     + D +TF+ V++AC+H GL +E  +YF++M  
Sbjct: 512 NAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEY 571

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------- 660
           E+ I P  EHYSC++D   R G  +K  +++  MPF     +W ++L +CR         
Sbjct: 572 EYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLAR 631

Query: 661 -----LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                L S+   D+  YV+LSN++A  G W++ A V+K+M DR ++KE GYSW+EVK+K 
Sbjct: 632 VAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKV 691

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLA 775
           YSF + D ++P   +I  +LE L   +   GYKPDTS  LQ +DD+ K   L  HSERLA
Sbjct: 692 YSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLA 751

Query: 776 IAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           IAF L+ TP G P++++KNL  C DCH+ IK++SK+  RDI+VRD++RFHHFK+G CSCG
Sbjct: 752 IAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGFCSCG 811

Query: 836 DYW 838
           DYW
Sbjct: 812 DYW 814



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 277/557 (49%), Gaps = 20/557 (3%)

Query: 27  YSKKDQ-----SLFDRSPQ--RNFVEYNRLL--FEYCRDSLHQEALNLFLGIRRLGLPLF 77
           YS+  Q      LF  SP   R+ V +  ++  F     +   +A++LF  + R G+   
Sbjct: 76  YSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPD 135

Query: 78  GSTLSSVLK---TCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGR 133
             T+++VL      G     +    +H   +K G    +V V  +L+D Y +   +   R
Sbjct: 136 RVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAAR 195

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           RVF +M   + V++ +++ G ++   +   L+LF  M+ +G+    FTFSTVL V    G
Sbjct: 196 RVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVG 255

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
            +    QVH +V +     V  V N+L+  Y K   + + + +F  M +RD++++N M+A
Sbjct: 256 DLCLGRQVHGLVARATSSNVF-VNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIA 314

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           GY  N         F  M     +     + S++ +  +   + + +Q+H+Q++  G+  
Sbjct: 315 GYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSS 374

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           +  +   L+  YSKCG M DA+K   + +  K  VSWTAMI+G +QNG  + A+  FC M
Sbjct: 375 EDLVGNALIDMYSKCG-MLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGM 433

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
            R G+ P+  T+S  + A   ++      Q+H+++I++ +  S   G+ALL+ Y K G L
Sbjct: 434 RRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCL 493

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           DEA + F+ + E++ ++W+A+++ YA  G  + A+K++  +   G KP+  TF SV++AC
Sbjct: 494 DEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSAC 553

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVS 548
           +    A E  K F     +  ++      S ++    + G  +   E+      + D + 
Sbjct: 554 SHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPII 613

Query: 549 WNSMICGYAQHGHTKKA 565
           W+S++     HG+   A
Sbjct: 614 WSSILHSCRTHGNQDLA 630



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 244/504 (48%), Gaps = 24/504 (4%)

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKS 227
           RM   G  P ++  + +L  L   G +A A  +   M  +N    +    N ++S Y +S
Sbjct: 24  RMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSL----NRMLSGYSRS 79

Query: 228 KMVRDARAVFDGMED--RDSITWNSMVAGYVT--NELHMEAFETFNNM---GLAGAELTR 280
             +  A  +F       RD++TW  M+  + +       +A   F +M   G+A   +T 
Sbjct: 80  GQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTV 139

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG-LMVAYSKCGKMEDASKIFS 339
           +T +++      T    +   LH   LK G+   + +    L+ AY K G +  A ++F 
Sbjct: 140 ATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQ 199

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF- 398
            M   +D V++ AM+ G  + G+   A++ F  M R+G+    FT+S +LT    V    
Sbjct: 200 EMPH-RDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLC 258

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              QVH  + +      F V  +LL+ Y K   LDE  K+F  + E+D V+++ M+AGYA
Sbjct: 259 LGRQVHGLVARATSSNVF-VNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYA 317

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN-ACTAPSAAVEQGKQFHACSIKAKLNNA 514
                   ++++R++ S         ++S+++ A + P   +  GKQ HA  +   L++ 
Sbjct: 318 WNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGI--GKQIHAQLVLLGLSSE 375

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V +AL+ MYSK G +++A   F  +  +  VSW +MI G  Q+G  ++AL++F  MRR
Sbjct: 376 DLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRR 435

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             L  D  TF   I A ++  ++  G+Q    ++   H+       S ++D+Y++ G L+
Sbjct: 436 AGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSG-SALLDMYTKCGCLD 494

Query: 635 KAMDIINRMPFAASATVWRTVLAA 658
           +A+   + MP   S + W  V++A
Sbjct: 495 EALQTFDEMPERNSIS-WNAVISA 517



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 167/354 (47%), Gaps = 20/354 (5%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK D     + LF    +R+ V YN ++  Y  +      L LF  ++ L        
Sbjct: 284 FYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALP 343

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +S+L   G +     G+Q+H + V  G + +  V  +L+D+Y +   ++  +  F + N
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN 403

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           +   VSWT++++G  +N   +  L+LF  M+  G+ P+  TFS+ +   ++  ++    Q
Sbjct: 404 DKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQ 463

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H+ +I++G        +AL+ MY K   + +A   FD M +R+SI+WN++++ Y     
Sbjct: 464 LHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQ 523

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK--NGIDFDHNIR 318
              A + F  M   G +    TF+SV+  C+          L  + +K    +++++ I 
Sbjct: 524 AKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNG-------LAEECMKYFELMEYEYGIS 576

Query: 319 ------TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                 + ++    + G+ +   ++   M    D + W++++     +G  DLA
Sbjct: 577 PWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLA 630


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/747 (34%), Positives = 415/747 (55%), Gaps = 56/747 (7%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD      ++  Y    N+ + R++F++    N ++W+SL+SGY +N      L  F +M
Sbjct: 66  RDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQM 125

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             +G KP+ +T  +VL   +   ++ T   +H   IK   E    V   L+ MY K K +
Sbjct: 126 WSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCL 185

Query: 231 RDARAVFDGMEDRDS-ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            +A  +F  + DR + + W +M+ GY  N   ++A + F  M   G E    TF S++  
Sbjct: 186 LEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTA 245

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C +       RQ+H  ++ +G   +  +++ L+  Y+KCG +  A  I   M E+ DVV 
Sbjct: 246 CTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTM-EIDDVVC 304

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHII 405
           W +MI G + +G ++ A+  F +M    +R + FTY  +L +  +    +    VH+  I
Sbjct: 305 WNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTI 364

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           KT ++   +V  AL++ Y K+G L  A  VF  I +KD+++W++++ GY   G  E A++
Sbjct: 365 KTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQ 424

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++  + +  V  ++F  + V +AC A    +E G+Q HA  IK+   + L   ++L+TMY
Sbjct: 425 LFCDMRTARVDLDQFVVACVFSAC-AELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           +K G +E A  V      R+++SW ++I GYAQ+G                         
Sbjct: 484 AKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNG------------------------- 518

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
                     LV+ GQ YF+ M   + I P  + Y+CM+DL  RAG + +A  ++NRM  
Sbjct: 519 ----------LVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDV 568

Query: 646 AASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARV 691
              AT+W+++L+ACR              LI L+P +S  YVLLSNM++  G W++ A +
Sbjct: 569 EPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHI 628

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           R+ M    + +E GYSWIE+K++ ++F++ D SHP + +IYSK++E+   +K+AG+ PD 
Sbjct: 629 RRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDM 688

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           ++ L+D+D+E KE  L+ HSE+LA+AFGL+    GAP++I KNLRVCGDCH+ +K IS +
Sbjct: 689 NFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSI 748

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +R I++RD N FHHF EG CSCGD+W
Sbjct: 749 FKRHIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 240/462 (51%), Gaps = 7/462 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF+ +P  N + ++ L+  YC++    E L  F  +   G      TL SVL+ C  L
Sbjct: 88  RKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTL 147

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVSWTSL 150
                G+ +HC  +K     ++ V+T LVD+Y +   + +   +F  + +  N V WT++
Sbjct: 148 SLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAM 207

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           L+GYA+N  + + ++ F  M+ +G++ N FTF ++L         A   QVH  +I +G 
Sbjct: 208 LTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGF 267

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V +AL+ MY K   +  AR + D ME  D + WNSM+ G VT+    EA   F+ 
Sbjct: 268 GPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHK 327

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M      +   T+ SV+K  A+ K L++   +HS  +K G D    +   L+  Y+K G 
Sbjct: 328 MHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGN 387

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +  A  +F+ + + KDV+SWT++++G++ NG  + A+  FC M    V  + F  + + +
Sbjct: 388 LSCALDVFNKILD-KDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFS 446

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   ++      QVHA+ IK++     S   +L+  Y K G L++A +V + ++ +++++
Sbjct: 447 ACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVIS 506

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVIN 487
           W+A++ GYAQ G  E     +  +    G+KP    ++ +I+
Sbjct: 507 WTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYACMID 548



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 241/465 (51%), Gaps = 45/465 (9%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWN---------------------------- 249
           N L+S   K+  V +AR +FD M  RD  TWN                            
Sbjct: 41  NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSI 100

Query: 250 ---SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
              S+V+GY  N   +E    F+ M   G + ++ T  SV++ C+T   L   + +H   
Sbjct: 101 TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYA 160

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +K  ++ +  + TGL+  YSKC  + +A  +F  + + K+ V WTAM++G+ QNG    A
Sbjct: 161 IKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKA 220

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
           +  F +M  +G+  N FT+  ILTA  ++S +    QVH  II + +  +  V +AL++ 
Sbjct: 221 IQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDM 280

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G L  A  + + ++  D+V W++M+ G    G  E A+ ++ ++ +  ++ ++FT+
Sbjct: 281 YAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTY 340

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            SV+ +  A    ++ G+  H+ +IK   +    VS+ALV MY+K+GN+  A +VF +  
Sbjct: 341 PSVLKS-LASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL 399

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D++SW S++ GY  +G  +KAL++F +MR   ++ D      V +AC    +++ G+Q
Sbjct: 400 DKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQ 459

Query: 603 YFDIMVNEHHIYPT----MEHYSCMVDLYSRAGMLEKAMDIINRM 643
                V+ + I  +    +   + ++ +Y++ G LE A+ + + M
Sbjct: 460 -----VHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSM 499



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 225/450 (50%), Gaps = 7/450 (1%)

Query: 32  QSLFDRSPQR-NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + LF   P R N+V++  +L  Y ++    +A+  F  +R  G+     T  S+L  C  
Sbjct: 189 EYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTS 248

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +  + FGRQVH   + SGF  +V V ++LVD+Y +  ++   R + D M   +VV W S+
Sbjct: 249 ISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSM 308

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + G   +   +  L LFH+M    I+ + FT+ +VL  LA    +     VH++ IK G 
Sbjct: 309 IVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGF 368

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +   +V NAL+ MY K   +  A  VF+ + D+D I+W S+V GYV N  H +A + F +
Sbjct: 369 DACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCD 428

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M  A  +L +     V   CA    +   RQ+H+  +K+      +    L+  Y+KCG 
Sbjct: 429 MRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGC 488

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIIL 389
           +EDA ++   M E ++V+SWTA+I G+ QNG ++   ++F  M +  G++P    Y+ ++
Sbjct: 489 LEDAIRVXDSM-ETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRYACMI 547

Query: 390 TAQPAVSPFQVHAHII-KTNYEKSFSVGTALLNAYVKKGIL---DEAAKVFELIDEKDIV 445
                        H++ + + E   ++  +LL+A    G L   + A K    ++  + +
Sbjct: 548 DLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSL 607

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
            +  +   ++  G  E A  I R + + G+
Sbjct: 608 PYVLLSNMFSVAGRWEDAAHIRRAMKTMGI 637



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 35/273 (12%)

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR---------- 468
           LL+   K G +DEA K+F+ +  +D   W+ M++ YA +G+   A K++           
Sbjct: 43  LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITW 102

Query: 469 ---------------------QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
                                Q+ S+G KP+++T  SV+ AC+  S  +  GK  H  +I
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLS-LLHTGKMIHCYAI 161

Query: 508 KAKLNNALCVSSALVTMYSK-KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           K +L   + V++ LV MYSK K  +E+    F    +++ V W +M+ GYAQ+G + KA+
Sbjct: 162 KIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAI 221

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           + FKEMR Q +E +  TF  ++TACT       G+Q    ++      P +   S +VD+
Sbjct: 222 QCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCII-WSGFGPNVYVQSALVDM 280

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           Y++ G L  A  I++ M        W +++  C
Sbjct: 281 YAKCGDLASARMILDTMEI-DDVVCWNSMIVGC 312



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           S+ L++  SK G ++ A ++F +   RD  +WN MI  YA  G+  +A ++F E      
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIX-- 97

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIM 607
             + IT+  +++     G   EG + F  M
Sbjct: 98  --NSITWSSLVSGYCKNGCEVEGLRQFSQM 125


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/579 (42%), Positives = 369/579 (63%), Gaps = 21/579 (3%)

Query: 279 TRSTFV-SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           T  +FV  ++KLCA  K L   +  H+Q+L  G+  D      L+  YSKCG ++ A ++
Sbjct: 62  THVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQV 121

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQPA 394
           F  M   + +VSW  MI    QNG  + A++   QM REG   + FT S +L    A+ A
Sbjct: 122 FDEMPS-RSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCA 180

Query: 395 VSPFQV-HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
           +S  Q+ HA  IK   + +  V TALL+ Y K G++ +A  VFE + ++ +V WS+M AG
Sbjct: 181 LSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAG 240

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    E A+ ++R+    G+K ++F  SSVI AC   +A +E GKQ +A   K+   +
Sbjct: 241 YVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIE-GKQVNALLSKSGFCS 299

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V+S+L+ MY+K G IE + +VF+   KR++V WN+MI G ++H  + + + +F++M+
Sbjct: 300 NIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQ 359

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           +  L  + +TF+ V++AC H GLV +GQ+YFD+M  EHH+ P + HYSCMVD  SRAG +
Sbjct: 360 QMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQI 419

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
            +A D+I+++PF ASA++W ++LA+CR              L  ++PH+S  Y+LLSNMY
Sbjct: 420 FEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMY 479

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           AA G W E A++RKL+ +  VKKE G SWIE+K+K + F+ G+ +HP+  +IYSKL E+ 
Sbjct: 480 AANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVM 539

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             L+  GYK +T + L  + +  K+ +L  HSE+LA   GL+  P  AP++I+KNLR+CG
Sbjct: 540 DELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICG 599

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH+ +KL SK   RD++VRDTNRFHHFK G CSCGD+W
Sbjct: 600 DCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 168/314 (53%), Gaps = 3/314 (0%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           S +  +LK C      + G+  H + +  G   D+  S  L+++Y +  +V+  R+VFD+
Sbjct: 65  SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M   ++VSW +++    +N   +  L+L  +MQ EG   + FT S+VL   A +  ++  
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             +H   IK   ++   V  AL+ +Y K  +++DA  VF+ M DR  +TW+SM AGYV N
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           E++ +A   F      G +  +    SVI  CA    +   +Q+++ + K+G   +  + 
Sbjct: 245 EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVA 304

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN-FFCQMTREG 377
           + L+  Y+KCG +E++ K+F  + E ++VV W AMISG L   A  L V   F +M + G
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDV-EKRNVVLWNAMISG-LSRHARSLEVMILFEKMQQMG 362

Query: 378 VRPNGFTYSIILTA 391
           + PN  T+  +L+A
Sbjct: 363 LSPNDVTFVSVLSA 376



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 188/416 (45%), Gaps = 37/416 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R+ V +N ++    ++    EAL+L L ++R G P    T+SSVL  C   
Sbjct: 119 RQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAK 178

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 + +H   +K+    +V V+T+L+D+Y +   ++D   VF+ M + +VV+W+S+ 
Sbjct: 179 CALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMA 238

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +N+M ++ L LF +    G+K + F  S+V+   A    +    QV+ ++ K+G  
Sbjct: 239 AGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFC 298

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V ++LI MY K   + ++  VF  +E R+ + WN+M++G   +   +E    F  M
Sbjct: 299 SNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKM 358

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGK 330
              G      TFVSV+  C     ++  ++    + K      +      MV   S+ G+
Sbjct: 359 QQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQ 418

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           + +A  + S +        W ++++    +G ++LA                        
Sbjct: 419 IFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA------------------------ 454

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALL--NAYVKKGILDEAAKVFELIDEKDI 444
              A   F +  H          + G  LL  N Y   G  DE AK+ +L+ E D+
Sbjct: 455 EVAAKKLFDIEPH----------NSGNYLLLSNMYAANGKWDEVAKMRKLLKESDV 500



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
           T++       +F   I    A    + QGK  HA  +   L   L  S+ L+ MYSK G+
Sbjct: 55  TTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGS 114

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           ++ A +VF     R LVSWN+MI    Q+G   +AL++  +M+R+   F   T   V+ A
Sbjct: 115 VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCA 174

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSCMVDLYSRAGMLEKAMDIINRMPFA 646
           C     + E Q     +++   I   M+      + ++D+Y++ G+++ A+ +   MP  
Sbjct: 175 CAAKCALSECQ-----LLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-D 228

Query: 647 ASATVWRTVLAA 658
            S   W ++ A 
Sbjct: 229 RSVVTWSSMAAG 240


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/746 (34%), Positives = 426/746 (57%), Gaps = 25/746 (3%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM--QVE 173
           + +++  +++T +V   R +FD M +  VV+WT L+  YARN   D   +LF +M     
Sbjct: 82  TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV--VTSVCNALISMYLKSKMVR 231
              P+  TF+T+L    D        QVH   +K G +     +V N L+  Y + + + 
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
            A  +F+ + ++DS+T+N+++ GY  + L+ E+   F  M  +G + +  TF  V+K   
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
              +  L +QLH+  +  G   D ++   ++  YSK  ++ +   +F  M E+ D VS+ 
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYN 320

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
            +IS + Q    + +++FF +M   G     F ++ +L+    +S  Q    +H   +  
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
             +    VG +L++ Y K  + +EA  +F+ + ++  V+W+A+++GY Q G     +K++
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
            ++    ++ ++ TF++V+ A +A  A++  GKQ HA  I++     +   S LV MY+K
Sbjct: 441 TKMRGSNLRADQSTFATVLKA-SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G+I+ A +VF+    R+ VSWN++I  +A +G  + A+  F +M    L+ D ++ +GV
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           +TAC+H G V++G +YF  M   + I P  +HY+CM+DL  R G   +A  +++ MPF  
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619

Query: 648 SATVWRTVLAACR--------------LISLQP-HDSAIYVLLSNMYAATGHWQERARVR 692
              +W +VL ACR              L S++   D+A YV +SN+YAA G W++   V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           K M +R +KK   YSW+EV +K + F + D +HP  ++I  K+ EL+  ++  GYKPDTS
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
            V+QD+D++ K   L  HSERLA+AF L++TP G P+ ++KNLR C DCH  IKLISK+ 
Sbjct: 740 SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIV 799

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +R+I VRDT+RFHHF EG+CSCGDYW
Sbjct: 800 KREITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 225/426 (52%), Gaps = 11/426 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+  P+++ V +N L+  Y +D L+ E+++LFL +R+ G      T S VLK    L D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   V +GF+RD +V   ++D Y + + V + R +FD+M E + VS+  ++S 
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y++    +  L  F  MQ  G    +F F+T+L + A+   +    Q+H   +    + +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N+L+ MY K +M  +A  +F  +  R +++W ++++GYV   LH    + F  M  
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +     +STF +V+K  A+   L L +QLH+ ++++G   +    +GL+  Y+KCG ++D
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A ++F  M + ++ VSW A+IS H  NG  + A+  F +M   G++P+  +   +LTA  
Sbjct: 506 AVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564

Query: 392 -----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
                +     FQ  + I     +K       +L+   + G   EA K+  E+  E D +
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYA--CMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622

Query: 446 AWSAML 451
            WS++L
Sbjct: 623 MWSSVL 628



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/593 (26%), Positives = 282/593 (47%), Gaps = 49/593 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR---LGLPLFGSTLSSVLKTC 88
           + LFD  P R  V +  L+  Y R+S   EA  LF  + R     LP    T +++L  C
Sbjct: 99  RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH-VTFTTLLPGC 157

Query: 89  GCLFDHVFGRQVHCECVKSGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
                     QVH   VK GF  +  + VS  L+  Y     ++    +F+++ E + V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           + +L++GY ++ +    + LF +M+  G +P+ FTFS VL  +      A   Q+H + +
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
             G     SV N ++  Y K   V + R +FD M + D +++N +++ Y   + +  +  
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M   G +     F +++ + A    L++ RQLH Q L    D   ++   L+  Y+
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC   E+A  IF  + + +  VSWTA+ISG++Q G     +  F +M    +R +  T++
Sbjct: 398 KCEMFEEAELIFKSLPQ-RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456

Query: 387 IILTAQPAVSPF----QVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
            +L A  + +      Q+HA II++ N E  FS G+ L++ Y K G + +A +VFE + +
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPD 515

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT----------- 490
           ++ V+W+A+++ +A  GD E A+  + ++   G++P+  +   V+ AC+           
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575

Query: 491 ----APSAAVEQGKQFHACSIKAKLNNA------------------LCVSSAL--VTMYS 526
               +P   +   K+ +AC +     N                   +  SS L    ++ 
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHK 635

Query: 527 KKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
            +   E A+E +F  ++ RD  ++ SM   YA  G  +K  +V K MR + ++
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/705 (36%), Positives = 403/705 (57%), Gaps = 86/705 (12%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N ++S Y K   +  A  VFD +  RDS++W +++ GY       +A + F +M      
Sbjct: 45  NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T+ T  +V+  CA T    + +++HS V+K G+     +   L+  Y+K G ++ A  +
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAV------------------------------ 367
           F  M+ +++  SW AMIS H+  G +DLA+                              
Sbjct: 165 FDRMK-LRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEA 223

Query: 368 -NFFCQMTRE-GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG----- 416
             FF  + ++  ++P+ F+ +  L+A   +       Q+H +I++T ++ S +VG     
Sbjct: 224 LQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALIS 283

Query: 417 ----------------------------TALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                                       TALLN YVK G +  A ++F  + + D+VAW+
Sbjct: 284 MYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWT 343

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM+ GY Q G    A+++++ + SEG +PN FT +++++A ++ ++ +  GKQ HA +I+
Sbjct: 344 AMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTS-LNHGKQIHASAIR 402

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK-RDLVSWNSMICGYAQHGHTKKALE 567
           +    +  V +AL TMY+K G+I  A +VF   R+ RD VSW SMI   AQHG  ++A+E
Sbjct: 403 SGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIE 462

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F++M    ++ D IT++GV++ACTH GLV++G+ YFD+M N H I PT+ HY+CMVDL+
Sbjct: 463 LFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLF 522

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
            RAG+L++A   +  MP       W ++L++C              RL+ ++P++S  Y 
Sbjct: 523 GRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYS 582

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
            L+N+Y++ G W + A++RKLM  R VKKE G SW++++NKT+ F   D  HPQ ++IY 
Sbjct: 583 ALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYK 642

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
            ++++   +K  G+ PDT  VL D++ E K+ IL  HSE+LAIAFG+++TP    L+I+K
Sbjct: 643 MMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMK 702

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVC DCH  IK ISKL  R+I+VRD  RFHHFK+G CSC DYW
Sbjct: 703 NLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 258/553 (46%), Gaps = 107/553 (19%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR-------- 156
           VK G    V +  +L++LY +T    D   +F++M      SW ++LSGYA+        
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 157 ---------------------NKMN--DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
                                N+M   +  +++F  M  + + P  FT + VL   A  G
Sbjct: 62  QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME------------ 241
                 +VH+ V+K G      V N+L++MY K+  ++ A+ VFD M+            
Sbjct: 122 SRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMIS 181

Query: 242 -------------------DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT--R 280
                              +RD ++WNSM+AG   +    EA + F+++ L    L   R
Sbjct: 182 LHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSI-LKDTSLKPDR 240

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLK-------------------------------- 308
            +  S +  CA  ++L   +Q+H  +++                                
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300

Query: 309 NGI-DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           +GI D D    T L+  Y K G +  A +IF+ +++  DVV+WTAMI G++QNG  + A+
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKD-PDVVAWTAMIVGYVQNGLNNDAI 359

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
             F  M  EG RPN FT + +L+A  +V+      Q+HA  I++    S SVG AL   Y
Sbjct: 360 EVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMY 419

Query: 424 VKKGILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
            K G ++ A KVF L+ + +D V+W++M+   AQ G  E A++++ Q+ + G+KP+  T+
Sbjct: 420 AKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITY 479

Query: 483 SSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
             V++ACT     VEQG+  F       K++  L   + +V ++ + G ++ A +  +  
Sbjct: 480 VGVLSACT-HGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538

Query: 542 -RKRDLVSWNSMI 553
             + D+++W S++
Sbjct: 539 PMEPDVIAWGSLL 551



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 233/497 (46%), Gaps = 75/497 (15%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K   +FD  P R+ V +  ++  Y +    ++A+ +F+ + +  +     TL++VL +C
Sbjct: 58  EKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASC 117

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM--------- 139
                   G++VH   VK G    V V+ SL+++Y +T +++  + VFD M         
Sbjct: 118 AATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWN 177

Query: 140 ----------------------NESNVVSWTSLLSGYARNKMNDRVLELFHR-MQVEGIK 176
                                 +E ++VSW S+++G  ++  ++  L+ F   ++   +K
Sbjct: 178 AMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLK 237

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR----- 231
           P+ F+ ++ L   A+   ++   Q+H  +++   +   +V NALISMY KS  V      
Sbjct: 238 PDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRI 297

Query: 232 ----------------------------DARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
                                        AR +F+ ++D D + W +M+ GYV N L+ +
Sbjct: 298 IEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNND 357

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A E F  M   G      T  +++   ++   L   +Q+H+  +++G     ++   L  
Sbjct: 358 AIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTT 417

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y+K G +  A K+F+++R+ +D VSWT+MI    Q+G  + A+  F QM   G++P+  
Sbjct: 418 MYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHI 477

Query: 384 TYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           TY  +L+A       +   S F +  ++ K   + + S    +++ + + G+L EA K  
Sbjct: 478 TYVGVLSACTHGGLVEQGRSYFDLMKNVHKI--DPTLSHYACMVDLFGRAGLLQEAYKFV 535

Query: 437 ELID-EKDIVAWSAMLA 452
           E +  E D++AW ++L+
Sbjct: 536 ENMPMEPDVIAWGSLLS 552



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 38/369 (10%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLFD 93
           F+   +R+ V +N ++    +     EAL  F  I +   L     +L+S L  C  L  
Sbjct: 196 FELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEK 255

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV------------------ 135
             FG+Q+H   V++ F     V  +L+ +Y ++  VE  RR+                  
Sbjct: 256 LSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALL 315

Query: 136 ---------------FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
                          F+ + + +VV+WT+++ GY +N +N+  +E+F  M  EG +PNSF
Sbjct: 316 NGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSF 375

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           T + +L   +    +    Q+H   I++G  +  SV NAL +MY K+  +  AR VF+ +
Sbjct: 376 TLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLL 435

Query: 241 -EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
            ++RD+++W SM+     + L  EA E F  M   G +    T+V V+  C     +   
Sbjct: 436 RQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQG 495

Query: 300 RQLHSQVLKNGIDFDHNIR--TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           R  +  ++KN    D  +     ++  + + G +++A K    M    DV++W +++S  
Sbjct: 496 RS-YFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSC 554

Query: 358 LQNGAIDLA 366
                +DLA
Sbjct: 555 KVYKNVDLA 563



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 202/480 (42%), Gaps = 113/480 (23%)

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
           N+++  Y     H++A + FN M +      ++TF                         
Sbjct: 14  NNLMNLYAKTGFHLDAHDLFNEMPV------KTTFS------------------------ 43

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
                       ++  Y+K GK+E A ++F ++  ++D VSWT +I G+ Q G  + A+ 
Sbjct: 44  ---------WNTILSGYAKQGKLEKAHQVFDLI-PVRDSVSWTTIIVGYNQMGRFEDAIK 93

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYV 424
            F  M ++ V P  FT + +L +  A        +VH+ ++K        V  +LLN Y 
Sbjct: 94  IFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYA 153

Query: 425 KKGIL-------------------------------DEAAKVFELIDEKDIVAWSAMLAG 453
           K G L                               D A   FEL+ E+DIV+W++M+AG
Sbjct: 154 KTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAG 213

Query: 454 YAQIGDTEGAVKIYRQ-LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
             Q G    A++ +   L    +KP+ F+ +S ++AC A    +  GKQ H   ++   +
Sbjct: 214 CNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSAC-ANLEKLSFGKQIHGYIVRTMFD 272

Query: 513 NALCVSSALVTMYSKKGNIE---------------------------------SASEVFK 539
            +  V +AL++MY+K G +E                                  A ++F 
Sbjct: 273 ASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFN 332

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
             +  D+V+W +MI GY Q+G    A+EVFK M  +    +  T   +++A +    ++ 
Sbjct: 333 SLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNH 392

Query: 600 GQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           G+Q +   + +   + P++ +   +  +Y++AG +  A  + N +        W +++ A
Sbjct: 393 GKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMA 450



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 135/240 (56%), Gaps = 12/240 (5%)

Query: 382 GFTYSIILTAQP----AVSPFQVHAHII--KTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           G T+S+ L        A + F + AH +  +   + +FS  T +L+ Y K+G L++A +V
Sbjct: 5   GLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNT-ILSGYAKQGKLEKAHQV 63

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+LI  +D V+W+ ++ GY Q+G  E A+KI+  +  + V P +FT ++V+ +C A + +
Sbjct: 64  FDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAA-TGS 122

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
              GK+ H+  +K  L+  + V+++L+ MY+K G+++ A  VF R + R+  SWN+MI  
Sbjct: 123 RGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISL 182

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           +   G    AL  F+ +  +D+    +++  +I  C   G  +E  Q+F  ++ +  + P
Sbjct: 183 HMNCGRVDLALAQFELLSERDI----VSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238



 Score = 43.1 bits (100), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 5/110 (4%)

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +K  L  ++ + + L+ +Y+K G    A ++F     +   SWN+++ GYA+ G  +KA 
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           +VF  +  +    D +++  +I      G  ++  + F  MV +  + PT
Sbjct: 62  QVFDLIPVR----DSVSWTTIIVGYNQMGRFEDAIKIFVDMVKD-KVLPT 106


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/579 (42%), Positives = 369/579 (63%), Gaps = 21/579 (3%)

Query: 279 TRSTFV-SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           T  +FV  ++KLCA  K L   +  H+Q+L  G+  D      L+  YSKCG ++ A ++
Sbjct: 62  THVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQV 121

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQPA 394
           F  M   + +VSW  MI    QNG  + A++   QM REG   + FT S +L    A+ A
Sbjct: 122 FDEMPS-RSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCA 180

Query: 395 VSPFQV-HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
           +S  Q+ HA  IK   + +  V TALL+ Y K G++ +A  VFE + ++ +V WS+M AG
Sbjct: 181 LSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAG 240

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    E A+ ++R+    G+K ++F  SSVI AC   +A +E GKQ +A   K+   +
Sbjct: 241 YVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIE-GKQMNALLSKSGFCS 299

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V+S+L+ MY+K G IE + +VF+   KR++V WN+MI G ++H  + + + +F++M+
Sbjct: 300 NIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQ 359

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           +  L  + +TF+ V++AC H GLV +GQ+YFD+M  EHH+ P + HYSCMVD  SRAG +
Sbjct: 360 QMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQI 419

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
            +A D+I+++PF ASA++W ++LA+CR              L  ++PH+S  Y+LLSNMY
Sbjct: 420 FEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMY 479

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           AA G W E A++RKL+ +  VKKE G SWIE+K+K + F+ G+ +HP+  +IYSKL E+ 
Sbjct: 480 AANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVM 539

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             L+  GYK +T + L  + +  K+ +L  HSE+LA   GL+  P  AP++I+KNLR+CG
Sbjct: 540 DELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICG 599

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH+ +KL SK   RD++VRDTNRFHHFK G CSCGD+W
Sbjct: 600 DCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 168/314 (53%), Gaps = 3/314 (0%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           S +  +LK C      + G+  H + +  G   D+  S  L+++Y +  +V+  R+VFD+
Sbjct: 65  SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M   ++VSW +++    +N   +  L+L  +MQ EG   + FT S+VL   A +  ++  
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             +H   IK   ++   V  AL+ +Y K  +++DA  VF+ M DR  +TW+SM AGYV N
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQN 244

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           E++ +A   F      G +  +    SVI  CA    +   +Q+++ + K+G   +  + 
Sbjct: 245 EMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVA 304

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN-FFCQMTREG 377
           + L+  Y+KCG +E++ K+F  + E ++VV W AMISG L   A  L V   F +M + G
Sbjct: 305 SSLIDMYAKCGGIEESYKVFRDV-EKRNVVLWNAMISG-LSRHARSLEVMILFEKMQQMG 362

Query: 378 VRPNGFTYSIILTA 391
           + PN  T+  +L+A
Sbjct: 363 LSPNDVTFVSVLSA 376



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 188/416 (45%), Gaps = 37/416 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R+ V +N ++    ++    EAL+L L ++R G P    T+SSVL  C   
Sbjct: 119 RQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAK 178

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 + +H   +K+    +V V+T+L+D+Y +   ++D   VF+ M + +VV+W+S+ 
Sbjct: 179 CALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMA 238

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +N+M ++ L LF +    G+K + F  S+V+   A    +    Q++ ++ K+G  
Sbjct: 239 AGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFC 298

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V ++LI MY K   + ++  VF  +E R+ + WN+M++G   +   +E    F  M
Sbjct: 299 SNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKM 358

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGK 330
              G      TFVSV+  C     +R  ++    + K      +      MV   S+ G+
Sbjct: 359 QQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQ 418

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           + +A  + S +        W ++++    +G ++LA                        
Sbjct: 419 IFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA------------------------ 454

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALL--NAYVKKGILDEAAKVFELIDEKDI 444
              A   F +  H          + G  LL  N Y   G  DE AK+ +L+ E D+
Sbjct: 455 EVAAKKLFDIEPH----------NSGNYLLLSNMYAANGKWDEVAKMRKLLKESDV 500



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
           T++       +F   I    A    + QGK  HA  +   L   L  S+ L+ MYSK G+
Sbjct: 55  TTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGS 114

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           ++ A +VF     R LVSWN+MI    Q+G   +AL++  +M+R+   F   T   V+ A
Sbjct: 115 VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCA 174

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSCMVDLYSRAGMLEKAMDIINRMPFA 646
           C     + E Q     +++   I   M+      + ++D+Y++ G+++ A+ +   MP  
Sbjct: 175 CAAKCALSECQ-----LLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-D 228

Query: 647 ASATVWRTVLAA 658
            S   W ++ A 
Sbjct: 229 RSVVTWSSMAAG 240


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 238/578 (41%), Positives = 364/578 (62%), Gaps = 21/578 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + + I  CA +K L  AR++H  +  +  + D  +   L+  Y KCG + +A K+F
Sbjct: 50  TPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVF 109

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             MR+ KD+VSWT++I+G+ QN     A+     M +   +PNGFT++ +L A  A +  
Sbjct: 110 DKMRK-KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA  +K ++ +   VG+ALL+ Y + G +D A  VF+ +D K+ V+W+A+++G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ GD E A+ ++ ++   G +   FT+SS+ +   A   A+EQGK  HA  +K++    
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSG-LAGIGALEQGKWVHAHMVKSRQKLT 287

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V + ++ MY+K G++  A +VF+R   +DLV+WNSM+  +AQ+G  K+A+  F+EMR+
Sbjct: 288 AFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  + ITF+ ++TAC+H GLV EG+ YFD M+ E+++ P +EHY  +VDL  RAG+L 
Sbjct: 348 SGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLN 406

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
            A+  I +MP   +A VW  +LAACR+                L P DS   VLL N+YA
Sbjct: 407 YALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYA 466

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +TGHW   ARVRK+M    VKKE   SW+E+ N  + F+A D +HP++ +IY   +E+S 
Sbjct: 467 STGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISM 526

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           +++  GY PD  YVL  +D++ +EA L  HSE++A+AF L+  PAGA ++I+KN+R+CGD
Sbjct: 527 KIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGD 586

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH+  K ISK+  R+IVVRDTNRFHHF  G CSCGDYW
Sbjct: 587 CHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 190/394 (48%), Gaps = 7/394 (1%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           + P    +   +   A    +  A ++H  +  +  E    + N+LI +Y K   V +A 
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            VFD M  +D ++W S++AGY  N++  EA      M     +    TF S++K      
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +  +  Q+H+  +K     D  + + L+  Y++CGKM+ A+ +F  + + K+ VSW A+I
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVSWNALI 225

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYE 410
           SG  + G  + A+  F +M R G     FTYS I +    +   +    VHAH++K+  +
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQK 285

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            +  VG  +L+ Y K G + +A KVFE +  KD+V W++ML  +AQ G  + AV  + ++
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
              G+  N+ TF  ++ AC+     V++GK +     +  L   +     +V +  + G 
Sbjct: 346 RKSGIYLNQITFLCILTACS-HGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGL 404

Query: 531 IESA-SEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           +  A   +FK   +     W +++     H + K
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 178/363 (49%), Gaps = 12/363 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R++H     S F  D  +  SL+ LY +  +V +  +VFD M + ++VSWTSL++GYA+N
Sbjct: 71  RKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQN 130

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVT 214
            M    + L   M     KPN FTF+++L   G  AD GI     Q+H + +K       
Sbjct: 131 DMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGI---GGQIHALAVKCDWHEDV 187

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V +AL+ MY +   +  A AVFD ++ ++ ++WN++++G+        A   F  M   
Sbjct: 188 YVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRN 247

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G E T  T+ S+    A    L   + +H+ ++K+       +   ++  Y+K G M DA
Sbjct: 248 GFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDA 307

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            K+F  +   KD+V+W +M++   Q G    AV+ F +M + G+  N  T+  ILTA   
Sbjct: 308 RKVFERVLN-KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSH 366

Query: 395 VSPFQVHAH----IIKTNYEKSFSVGTALLNAYVKKGILDEA-AKVFELIDEKDIVAWSA 449
               +   H    I + N E        +++   + G+L+ A   +F++  E     W A
Sbjct: 367 GGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGA 426

Query: 450 MLA 452
           +LA
Sbjct: 427 LLA 429



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 190/413 (46%), Gaps = 42/413 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
             +FD+  +++ V +  L+  Y ++ +  EA+ L  G+ +      G T +S+LK  G  
Sbjct: 106 HKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G Q+H   VK  +  DV V ++L+D+Y R   ++    VFD ++  N VSW +L+
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG+AR    +  L +F  MQ  G +   FT+S++   LA  G +     VH  ++K+  +
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQK 285

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N ++ MY KS  + DAR VF+ + ++D +TWNSM+  +    L  EA   F  M
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G  L + TF+ ++  C+           H  ++K G  +                  
Sbjct: 346 RKSGIYLNQITFLCILTACS-----------HGGLVKEGKHY------------------ 376

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            D  K +++  E++  V+   ++    + G ++ A+ F  +M  E   P    +  +L A
Sbjct: 377 FDMIKEYNLEPEIEHYVTVVDLLG---RAGLLNYALVFIFKMPME---PTAAVWGALLAA 430

Query: 392 -----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
                   V  F    H+ + + + S      L N Y   G  D AA+V +++
Sbjct: 431 CRMHKNAKVGQFAAD-HVFQLDPDDS-GPPVLLYNIYASTGHWDAAARVRKMM 481


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 289/838 (34%), Positives = 439/838 (52%), Gaps = 80/838 (9%)

Query: 76  LFGSTLSSVLKTCGCLFDH----VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
            F ST SS       LF            H + +  G   D    T ++ +Y+  N+   
Sbjct: 39  FFFSTASSTTDLTSTLFHQCKSLASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAK 95

Query: 132 GRRVFDDMNESN--VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL 189
              V   ++ S+  V  W  L+         + VL+L+ RMQ  G +P+ +TF  VL   
Sbjct: 96  ALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKAC 155

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR---DSI 246
            +         VH +V  +G E    V N L+SMY +     +AR VFD M +R   D +
Sbjct: 156 GEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLV 215

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGL-AGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           +WNS+VA Y+     + A + F  M    G      + V+V+  CA+       +Q+H  
Sbjct: 216 SWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGY 275

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
            L++G+  D  +   ++  Y+KCG ME+A+K+F  M+ +KDVVSW AM++G+ Q G  D 
Sbjct: 276 ALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK-VKDVVSWNAMVTGYSQIGRFDD 334

Query: 366 AVNFFCQMTREGVRPNGFTYSIILT----------------------AQPAVSPF----- 398
           A+  F ++  E +  N  T+S ++                       ++P V        
Sbjct: 335 ALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLS 394

Query: 399 ------------QVHAHIIK-------TNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
                       + H H IK        +      V  AL++ Y K      A  +F+LI
Sbjct: 395 GCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLI 454

Query: 440 DEKD--IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG--VKPNEFTFSSVINACTAPSAA 495
             KD  +V W+ ++ G AQ G+   A++++ Q+      V PN FT S  + AC A   A
Sbjct: 455 PPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMAC-ARLGA 513

Query: 496 VEQGKQFHACSIKAKLNNA-LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           +  G+Q HA  ++ +  +A L V++ L+ MYSK G++++A  VF    +R+ VSW S++ 
Sbjct: 514 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 573

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY  HG  ++AL++F EM++  L  DG+TF+ V+ AC+H+G+VD+G  YF+ M  +  + 
Sbjct: 574 GYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVV 633

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  EHY+CMVDL SRAG L++AM++I  MP   +  VW  +L+ACR              
Sbjct: 634 PGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQ 693

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L+ L+  +   Y LLSN+YA    W++ AR+R LM +  +KK  G SW++ +  T +F A
Sbjct: 694 LLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFA 753

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           GD SHP S QIY  L +L  R+K  GY PD  + L D+DDE K  +LS+HSE+LA+A+G+
Sbjct: 754 GDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGI 813

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + T  GAP++I KNLR CGDCH+    IS +   +I+VRD++RFHHFK G CSC  YW
Sbjct: 814 LTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 261/549 (47%), Gaps = 56/549 (10%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           +N+L+         ++ L L+  ++RLG      T   VLK CG +     G  VH    
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV---VSWTSLLSGYARNKMNDR 162
            SGF  +V V   LV +Y R    E+ R+VFD+M E  V   VSW S+++ Y +   + R
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232

Query: 163 VLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
            +++F RM  + GI+P++ +   VL   A  G  +   QVH   +++G      V NA++
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMV----------------------------- 252
            MY K  M+ +A  VF+ M+ +D ++WN+MV                             
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352

Query: 253 ------AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
                 AGY    L  EA + F  M L G+E    T VS++  CA+   L   ++ H   
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHA 412

Query: 307 LKNGIDFDHN-------IRTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHL 358
           +K  ++ D N       +   L+  YSKC   + A  +F ++    + VV+WT +I G+ 
Sbjct: 413 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 472

Query: 359 QNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKS 412
           Q+G  + A+  F QM +    V PN FT S  L A   +       Q+HA++++  +E +
Sbjct: 473 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 532

Query: 413 -FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              V   L++ Y K G +D A  VF+ + +++ V+W++++ GY   G  E A++I+ ++ 
Sbjct: 533 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 592

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
              + P+  TF  V+ AC+  S  V+QG   F+  +    +       + +V + S+ G 
Sbjct: 593 KVXLVPDGVTFVVVLYACSH-SGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGR 651

Query: 531 IESASEVFK 539
           ++ A E+ +
Sbjct: 652 LDEAMELIR 660



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 231/511 (45%), Gaps = 81/511 (15%)

Query: 32  QSLFDRSPQR---NFVEYNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKT 87
           + +FD   +R   + V +N ++  Y +      A+ +F  +   LG+     +L +VL  
Sbjct: 200 RQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPA 259

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  +     G+QVH   ++SG   DV V  ++VD+Y +   +E+  +VF+ M   +VVSW
Sbjct: 260 CASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSW 319

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            ++++GY++    D  L LF +++ E I+ N  T+S V+   A  G+   A+ V   ++ 
Sbjct: 320 NAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLL 379

Query: 208 NGGE--VVT----------------------------------------SVCNALISMYL 225
            G E  VVT                                         V NALI MY 
Sbjct: 380 CGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYS 439

Query: 226 KSKMVRDARAVFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           K K  + ARA+FD +  +DR  +TW  ++ G   +    EA E F+ M      +  + F
Sbjct: 440 KCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAF 499

Query: 284 VSVIKL--CATTKELRLARQLHSQVLKNGID----FDHNIRTGLMVAYSKCGKMEDASKI 337
                L  CA    LR  RQ+H+ VL+N  +    F  N    L+  YSK G ++ A  +
Sbjct: 500 TISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANC---LIDMYSKSGDVDAARVV 556

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M + ++ VSWT++++G+  +G  + A+  F +M +  + P+G T+ ++L A      
Sbjct: 557 FDNMHQ-RNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACS---- 611

Query: 398 FQVHAHIIK--TNY----EKSFSVGTA------LLNAYVKKGILDEAAKVFELIDEKDIV 445
              H+ ++    NY     K F V         +++   + G LDEA ++   +  K   
Sbjct: 612 ---HSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTP 668

Query: 446 A-WSAMLAG---YAQIGDTEGAVKIYRQLTS 472
           A W A+L+    YA +   E A     +L S
Sbjct: 669 AVWVALLSACRVYANVELGEYAANQLLELES 699



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 10/196 (5%)

Query: 23  RSPFYSKKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLF 77
           +SP   K  +++FD  P   R+ V +  L+    +     EAL LF   L      +P  
Sbjct: 442 KSP---KAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMP-N 497

Query: 78  GSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVF 136
             T+S  L  C  L    FGRQ+H   +++ F +  + V+  L+D+Y ++ +V+  R VF
Sbjct: 498 AFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVF 557

Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           D+M++ N VSWTSL++GY  +   +  L++F+ MQ   + P+  TF  VL   +  G+V 
Sbjct: 558 DNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVD 617

Query: 197 TAVQVHTMVIKNGGEV 212
             +     + K+ G V
Sbjct: 618 QGINYFNGMNKDFGVV 633


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/686 (37%), Positives = 387/686 (56%), Gaps = 32/686 (4%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNG---GEVVTSVCNALISMYLKSKMVRDAR 234
           ++FTF  +L      G   TA Q+H   ++ G   G+   S   AL+  YL+   VRDA 
Sbjct: 70  DAFTFPPLLRAAQGPG---TAAQLHACALRLGLLRGDAFAS--GALVHAYLRFGRVRDAY 124

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
             FD M  RD   WN+M++G   N    EA   F  M + G      T  SV+ +C    
Sbjct: 125 RAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLG 184

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +  LA  +H   +K+G+D +  +   ++  Y K G +E+  K+F  M   +D+V+W ++I
Sbjct: 185 DRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSS-RDLVTWNSII 243

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SIILTAQPAVSPFQVHAHIIKTNYE 410
           SGH Q G +  AV  FC M   GV P+  T     S I           VH ++++  ++
Sbjct: 244 SGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWD 303

Query: 411 -KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                 G A+++ Y K   ++ A ++F+ +  +D V+W+ ++ GY Q G    A+ +Y  
Sbjct: 304 VGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDH 363

Query: 470 LTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           +   EG+KP + TF SV+ A +    A++QG + HA SIK  LN  + V + ++ +Y+K 
Sbjct: 364 MQKHEGLKPIQGTFVSVLPAYSH-LGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKC 422

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G ++ A  +F++  +R    WN++I G   HGH  KAL +F +M+++ +  D +TF+ ++
Sbjct: 423 GKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLL 482

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC+HAGLVD+G+ +F++M   + I P  +HY+CMVD++ RAG L+ A D I  MP    
Sbjct: 483 AACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPD 542

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           + +W  +L ACR              L  L P +   YVL+SNMYA  G W     VR L
Sbjct: 543 SAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSL 602

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDIS--HPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           +  + ++K  G+S IEVK     F +G+    HPQ  +I  +L +L  +++  GY PD S
Sbjct: 603 VRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYS 662

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
           +VLQD++++ KE IL+ HSERLAIAFG++ TP   PL I KNLRVCGDCH   K ISK+ 
Sbjct: 663 FVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKIT 722

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R+I+VRD+NRFHHFK+G CSCGD+W
Sbjct: 723 EREIIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 242/478 (50%), Gaps = 19/478 (3%)

Query: 99  QVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           Q+H   ++ G  R D   S +LV  Y+R   V D  R FD+M   +V +W ++LSG  RN
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 + LF RM +EG+  ++ T S+VL +    G  A A+ +H   +K+G +    VC
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVC 208

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NA+I +Y K  M+ + R VFDGM  RD +TWNS+++G+        A E F  M  +G  
Sbjct: 209 NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVS 268

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASK 336
               T +S+    A   ++   R +H  +++ G D    I    +V  Y+K  K+E A +
Sbjct: 269 PDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQR 328

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAV 395
           +F  M  ++D VSW  +I+G++QNG    A++ +  M + EG++P   T+  +L A   +
Sbjct: 329 MFDSM-PVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHL 387

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              Q    +HA  IKT       VGT +++ Y K G LDEA  +FE    +    W+A++
Sbjct: 388 GALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVI 447

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH-----ACS 506
           +G    G    A+ ++ Q+  EG+ P+  TF S++ AC+  +  V+QG+ F      A  
Sbjct: 448 SGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSH-AGLVDQGRNFFNMMQTAYG 506

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
           IK    +  C    +V M+ + G ++ A +  +    K D   W +++     HG+ +
Sbjct: 507 IKPIAKHYAC----MVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVE 560



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 253/545 (46%), Gaps = 55/545 (10%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD    R+   +N +L   CR++   EA+ LF  +   G+     T+SSVL  C  L D 
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
                +H   VK G   ++ V  +++D+Y +   +E+ R+VFD M+  ++V+W S++SG+
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +       +E+F  M+  G+ P+  T  ++   +A  G +     VH  +++ G +V  
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306

Query: 215 SVC-NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +  NA++ MY K   +  A+ +FD M  RD+++WN+++ GY+ N L  EA   +++M  
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366

Query: 274 -AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G +  + TFVSV+   +    L+   ++H+  +K G++ D  + T ++  Y+KCGK++
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLD 426

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  +F      +    W A+ISG   +G    A++ F QM +EG+ P+  T+       
Sbjct: 427 EAMLLFEQTPR-RSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTF------- 478

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE----KDIVA-W 447
                                    +LL A    G++D+    F ++      K I   +
Sbjct: 479 ------------------------VSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHY 514

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + M+  + + G  + A    R +    +KP+   + +++ AC      VE GK       
Sbjct: 515 ACMVDMFGRAGQLDDAFDFIRNMP---IKPDSAIWGALLGACRI-HGNVEMGKVASQNLF 570

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEV---FKRQRKRDLVSWNSMICGYAQHGHTKK 564
           +    N +     +  MY+K G  +   EV    +RQ  +    W+S+          K+
Sbjct: 571 ELDPKN-VGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI--------EVKR 621

Query: 565 ALEVF 569
           ++ VF
Sbjct: 622 SVNVF 626



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 164/352 (46%), Gaps = 31/352 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLP---LFGSTLSSVLKTC 88
           + +FD    R+ V +N ++  + +      A+ +F G+R  G+    L   +L+S +  C
Sbjct: 225 RKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQC 284

Query: 89  GCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           G   D   GR VHC  V+ G+   D+    ++VD+Y + + +E  +R+FD M   + VSW
Sbjct: 285 G---DICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSW 341

Query: 148 TSLLSGYARNKMNDRVLELFHRMQV-EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
            +L++GY +N +    + ++  MQ  EG+KP   TF +VL   +  G +    ++H + I
Sbjct: 342 NTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSI 401

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G  +   V   +I +Y K   + +A  +F+    R +  WN++++G   +    +A  
Sbjct: 402 KTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALS 461

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA-- 324
            F+ M   G      TFVS++  C+           H+ ++  G +F + ++T   +   
Sbjct: 462 LFSQMQQEGISPDHVTFVSLLAACS-----------HAGLVDQGRNFFNMMQTAYGIKPI 510

Query: 325 ----------YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                     + + G+++DA      M    D   W A++     +G +++ 
Sbjct: 511 AKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMG 562


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/744 (34%), Positives = 417/744 (56%), Gaps = 23/744 (3%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
           +T L   ++  N ++  R VFD + + +VV W  ++  YA +    + + L+  M   G+
Sbjct: 44  ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
            P +FTF  +L   +    +     +HT     G  +   V  AL+ MY K   +  A+ 
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163

Query: 236 VFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           +F+ +  +DRD + WN+M+A +  + LH +   +   M  AG     ST VS++      
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L   + +H+  ++N    +  ++T L+  Y+KC  +  A KIF+ + +  DV  W+AM
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVC-WSAM 282

Query: 354 ISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTN 408
           I G++ + +I  A+  +  M    G+ P   T + +L A   ++  +    +H H+IK+ 
Sbjct: 283 IGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSG 342

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
            +   +VG +L++ Y K GI+D A    + +  KD V++SA+++G  Q G  E A+ I+R
Sbjct: 343 MDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFR 402

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+ S G+ P   T  +++ AC+   AA++ G   H  ++     N   + +A++ MYSK 
Sbjct: 403 QMQSSGIAPYLETMIALLPACSH-LAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKC 461

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G I  + E+F R + RD++SWN+MI GY  HG   +AL +F+E++   L+ D +T I V+
Sbjct: 462 GKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVL 521

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
           +AC+H+GLV EG+ +F  M    +I P M HY CMVDL +RAG L++A   I RMPF  +
Sbjct: 522 SACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPN 581

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
             +W  +LAACR              +  L P  +  +VL+SN+Y++ G W + A +R +
Sbjct: 582 VRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSI 641

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
                 KK  G SW+E+    + F+ G  SHPQS  I  KL+EL  ++K  GY+ D+S+V
Sbjct: 642 QRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFV 701

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L D+++E KE IL  HSE++AIAFG++ T   + + + KNLR+C DCH+ IK I+ L  R
Sbjct: 702 LHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTER 761

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +I VRD +RFHHFK+G+C+C D+W
Sbjct: 762 EITVRDASRFHHFKDGICNCQDFW 785



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/561 (24%), Positives = 294/561 (52%), Gaps = 19/561 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+ P+ + V +N ++  Y      Q+++ L+L + +LG+     T   +LK C  L  
Sbjct: 63  VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQA 122

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN--ESNVVSWTSLL 151
              GR +H      G + D+ VST+L+ +Y +  ++   + +F+ ++  + ++V+W +++
Sbjct: 123 LQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMI 182

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + ++ + ++ + +    +MQ  G+ PNS T  ++L  +     +     +H   I+N   
Sbjct: 183 AAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFF 242

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  AL+ MY K  ++  AR +F+ +  ++ + W++M+ GYV ++   +A   +++M
Sbjct: 243 DNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDM 302

Query: 272 -GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
             + G   T +T  ++++ CA   +L+  ++LH  ++K+G+D D  +   L+  Y+KCG 
Sbjct: 303 LCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGI 362

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           M++A      M   KD VS++A+ISG +QNG  + A+  F QM   G+ P   T   +L 
Sbjct: 363 MDNAVGFLDEMIA-KDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLP 421

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   ++  Q     H + +   +    S+  A+++ Y K G +  + ++F+ +  +DI++
Sbjct: 422 ACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIIS 481

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC- 505
           W+ M+ GY   G    A+ ++++L + G+KP++ T  +V++AC+  S  V +GK + +  
Sbjct: 482 WNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSH-SGLVTEGKYWFSSM 540

Query: 506 ----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
               +IK ++ + +C    +V + ++ GN++ A    +R     ++  W +++     H 
Sbjct: 541 SQNFNIKPRMAHYIC----MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHK 596

Query: 561 HTKKALEVFKEMRRQDLEFDG 581
           + +   +V K+++    E  G
Sbjct: 597 NIEMGEQVSKKIQLLGPEGTG 617



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 166/336 (49%), Gaps = 11/336 (3%)

Query: 26  FYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSV 84
           FY++K   +F+   ++N V ++ ++  Y       +AL L+  +  + GL    +TL+++
Sbjct: 262 FYARK---IFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATM 318

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L+ C  L D   G+++HC  +KSG   D  V  SL+ +Y +   +++     D+M   + 
Sbjct: 319 LRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDT 378

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VS+++++SG  +N   ++ L +F +MQ  GI P   T   +L   +    +      H  
Sbjct: 379 VSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGY 438

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            +  G    TS+CNA+I MY K   +  +R +FD M++RD I+WN+M+ GY  + L +EA
Sbjct: 439 TVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEA 498

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F  +   G +    T ++V+  C+ +  +   +   S + +N   F+   R    + 
Sbjct: 499 LSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQN---FNIKPRMAHYIC 555

Query: 325 ----YSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
                ++ G +++A      M  + +V  W A+++ 
Sbjct: 556 MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAA 591



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 121/249 (48%), Gaps = 6/249 (2%)

Query: 395 VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           +  F  H H  + +   S +  T L   ++ +  +  A  VF+ I +  +V W+ M+  Y
Sbjct: 25  IRSFSPHPHPHRVS--DSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTY 82

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A  G  + ++ +Y  +   GV P  FTF  ++ AC++   A++ G+  H  +    L+  
Sbjct: 83  AWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQ-ALQLGRLIHTHAHILGLSMD 141

Query: 515 LCVSSALVTMYSKKGNIESASEVFK--RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           L VS+AL+ MY+K G++  A  +F     + RD+V+WN+MI  ++ H    + +    +M
Sbjct: 142 LYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQM 201

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           ++  +  +  T + ++     A  + +G+      +  +  +  +   + ++D+Y++  +
Sbjct: 202 QQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYI-RNFFFDNVVLQTALLDMYAKCHL 260

Query: 633 LEKAMDIIN 641
           L  A  I N
Sbjct: 261 LFYARKIFN 269


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/694 (35%), Positives = 407/694 (58%), Gaps = 53/694 (7%)

Query: 161 DRVLELFHRMQVEGIKPN-SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
           D+   L   M +   KPN +F  + +L + A  G ++ A ++   + +          NA
Sbjct: 39  DQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRD----NFSWNA 94

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           ++S+Y KS +V D R +FD M  RDS+++N++++G+  N     A   F  M   G + T
Sbjct: 95  MLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPT 154

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             T VSV+  C    +LR  +Q+H +++   +  +  +   L   Y++CG+++ A ++F 
Sbjct: 155 EYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFD 214

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
            M  +++VV+W  MISG+L+N   +  ++ F +M    ++P+  T S             
Sbjct: 215 RM-VIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTAS------------- 260

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
                             ++L AY++ G +DEA KVF  I EKD V W+ M+ G AQ G 
Sbjct: 261 ------------------SVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGK 302

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
            E A+ ++ ++  E  +P+ +T SSV+++C A  A++  G+  H  +    +N+ L VSS
Sbjct: 303 EEDALLLFSEMLLENARPDGYTISSVVSSC-AKLASLYHGQVVHGKAFLMGVNDDLLVSS 361

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           ALV MY K G    A  +F   + R++VSWNSMI GYA +G   +AL +++ M  ++L+ 
Sbjct: 362 ALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKP 421

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           D +TF+GV++AC HAGLV+EG++YF  M ++H + PT +HY+CMV+L+ R+G ++KA+D+
Sbjct: 422 DSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDL 481

Query: 640 INRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHW 685
           I+ M    ++ +W TVL+ C               LI L P ++  Y++LSNMYAA G W
Sbjct: 482 ISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRW 541

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
           ++ A +R LM  + VKK + YSWIE+ N+ + F+A D +HP +  I+ +L  L  +L++A
Sbjct: 542 KDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEA 601

Query: 746 GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG-APLQIVKNLRVCGDCHTV 804
           G+ P+T+ VL D  ++ K   ++ HSE+LA+A+GL+  P G  P++I+KN+R C DCH  
Sbjct: 602 GFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIF 661

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +K +S + RR +++RD+NRFHHF EG CSC DYW
Sbjct: 662 MKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 227/504 (45%), Gaps = 67/504 (13%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P R+ V YN ++  +  +     AL +FL +++ GL     T  SVL  C  L D
Sbjct: 111 IFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLD 170

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   +      +V V  +L DLY R   ++  RR+FD M   NVV+W  ++SG
Sbjct: 171 LRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISG 230

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y +N+  ++ ++LFH MQV  +KP+  T S+VLG                          
Sbjct: 231 YLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------------------------- 265

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
                     Y+++  + +AR VF  + ++D + W  M+ G   N    +A   F+ M L
Sbjct: 266 ----------YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLL 315

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
             A     T  SV+  CA    L   + +H +    G++ D  + + L+  Y KCG   D
Sbjct: 316 ENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRD 375

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  IFS M + ++VVSW +MI G+  NG    A++ +  M  E ++P+  T+  +L+A  
Sbjct: 376 AWTIFSTM-QTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSA-- 432

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                 VHA +++   E   S+         + G+            E     ++ M+  
Sbjct: 433 -----CVHAGLVEEGKEYFCSMSD-------QHGL------------EPTPDHYACMVNL 468

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           + + G  + AV +   ++ E   PN   +++V++ C      ++ G+    C I+    N
Sbjct: 469 FGRSGHMDKAVDLISSMSQE---PNSLIWTTVLSVCVM-KGDIKHGEMAARCLIELNPFN 524

Query: 514 ALCVSSALVTMYSKKGNIESASEV 537
           A+     L  MY+ +G  +  + +
Sbjct: 525 AV-PYIMLSNMYAARGRWKDVASI 547


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/706 (36%), Positives = 404/706 (57%), Gaps = 54/706 (7%)

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDR 243
           L +L++   + T  Q+H+ +IK G        + LI     S    +  A ++F  + + 
Sbjct: 32  LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           + + WN M+ G  ++E    A E + +M  +G E    TF S+ K C   +     +Q+H
Sbjct: 92  NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVH 151

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF--SMMRE------------------ 343
           + VLK G++ +  + T L+  Y++ G++ +A  +F  S MR+                  
Sbjct: 152 AHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLD 211

Query: 344 ----------MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-Q 392
                     ++DVVSW AMISG+ Q+G ++ A+ FF +M R  V PN  T   +L+A  
Sbjct: 212 EARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACA 271

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            + S  Q    V + I       +  +   L++ YVK G L+EA+ +FE I +K++V+W+
Sbjct: 272 QSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWN 331

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            M+ GY  +   + A+ ++R++    + PN+ TF S++ AC A   A++ GK  HA   K
Sbjct: 332 VMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPAC-ANLGALDLGKWVHAYVDK 390

Query: 509 --AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
               + N + + ++L+ MY+K G++  A  +F     + L +WN+MI G+A HGHT  AL
Sbjct: 391 NMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTAL 450

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +F  M  +    D ITF+GV+TAC HAGL+  G++YF  M+ ++ + P + HY CM+DL
Sbjct: 451 GLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDL 510

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
           + RAG+ ++A  ++  M       +W ++L ACR              L  L+P + + Y
Sbjct: 511 FGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAY 570

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VLLSN+YA  G W++ A++R  +ND ++KK  G S IEV +  + FL GD  HPQSN+IY
Sbjct: 571 VLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIY 630

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
             L+E+  RL+ AG+ PDTS VL D+D+E KE +LS HSE+LAIAFGL++T  G  ++I+
Sbjct: 631 KMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIM 690

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLRVCG+CH+  KLISK+  R+I+ RD NRFHHFK+G CSC DYW
Sbjct: 691 KNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 132/517 (25%), Positives = 242/517 (46%), Gaps = 44/517 (8%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRT--NNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +Q+H + +K+G        + L++    +   ++     +F  +   N V W  ++ G +
Sbjct: 45  KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLS 104

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE---- 211
            ++     LE +  M   G +PN +TF ++              QVH  V+K G E    
Sbjct: 105 SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAF 164

Query: 212 VVTSVCN---------------------------ALISMYLKSKMVRDARAVFDGMEDRD 244
           V TS+ N                           ALI+ Y     + +AR +FD +  RD
Sbjct: 165 VHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRD 224

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT-KELRLARQLH 303
            ++WN+M++GY  +    EA   F  M  A      ST +SV+  CA +   L+L   + 
Sbjct: 225 VVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVR 284

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           S +   G+  +  +  GL+  Y KCG +E+AS +F  +++ K+VVSW  MI G+      
Sbjct: 285 SWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQD-KNVVSWNVMIGGYTHMSCY 343

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKT--NYEKSFSVGT 417
             A+  F +M +  + PN  T+  IL A   +        VHA++ K   + + + ++ T
Sbjct: 344 KEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWT 403

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           +L++ Y K G L  A ++F+ ++ K +  W+AM++G+A  G T+ A+ ++ ++TSEG  P
Sbjct: 404 SLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVP 463

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKA-KLNNALCVSSALVTMYSKKGNIESASE 536
           ++ TF  V+ AC   +  +  G+++ +  I+  K++  L     ++ ++ + G  + A  
Sbjct: 464 DDITFVGVLTACKH-AGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAET 522

Query: 537 VFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           + K  + K D   W S++     H   + A  V K +
Sbjct: 523 LVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHL 559



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 212/478 (44%), Gaps = 51/478 (10%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           SLF      N V +N ++           AL  ++ +   G      T  S+ K+C  + 
Sbjct: 83  SLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIR 142

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV----------------------- 129
               G+QVH   +K G   +  V TSL+++Y +   +                       
Sbjct: 143 GAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALIT 202

Query: 130 --------EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                   ++ R +FD++   +VVSW +++SGYA++   +  +  F  M+   + PN  T
Sbjct: 203 GYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVST 262

Query: 182 FSTVLGVLADEG-IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
             +VL   A  G  +     V + +   G      + N LI MY+K   + +A  +F+ +
Sbjct: 263 MLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI 322

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
           +D++ ++WN M+ GY     + EA   F  M  +  +    TF+S++  CA    L L +
Sbjct: 323 QDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGK 382

Query: 301 QLHSQVLKNGIDFDHNIR--TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +H+ V KN     + +   T L+  Y+KCG +  A +IF  M   K + +W AMISG  
Sbjct: 383 WVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCM-NTKSLATWNAMISGFA 441

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYEKSFSV 415
            +G  D A+  F +MT EG  P+  T+  +LTA        +      +   +Y+ S  +
Sbjct: 442 MHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKL 501

Query: 416 G--TALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
                +++ + + G+ DEA  + + ++ K D   W ++L          GA +I+R++
Sbjct: 502 PHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLL----------GACRIHRRI 549



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 152/339 (44%), Gaps = 4/339 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P R+ V +N ++  Y +    +EA+  F  +RR  +    ST+ SVL  C   
Sbjct: 214 RELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQS 273

Query: 92  FDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
              +  G  V       G   ++ +   L+D+Y++  ++E+   +F+ + + NVVSW  +
Sbjct: 274 GSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVM 333

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GY         L LF RM    I PN  TF ++L   A+ G +     VH  V KN  
Sbjct: 334 IGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMK 393

Query: 211 EVVTSVC--NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
            +  +V    +LI MY K   +  A+ +FD M  +   TWN+M++G+  +     A   F
Sbjct: 394 SMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLF 453

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSK 327
           + M   G      TFV V+  C     L L R+  S ++++          G M+  + +
Sbjct: 454 SRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGR 513

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            G  ++A  +   M    D   W +++     +  I+LA
Sbjct: 514 AGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELA 552


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/847 (32%), Positives = 456/847 (53%), Gaps = 41/847 (4%)

Query: 19  PKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFG 78
           P+  R+ F   +D+S+         V +  L+    R    +EA +LF  ++  G+    
Sbjct: 91  PEEARAVFQGIQDKSV---------VAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPND 141

Query: 79  STLSSVLKTCGCLF--DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF 136
            T  +VL  CG  +  D +  R   C         DV V+T++++ Y +  +++    VF
Sbjct: 142 VTYVAVLGACGHPWEVDTIRARVEAC----GSLELDVIVATAVMNAYGKCGDLDSAWGVF 197

Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           D +   +   W +++S    ++  D  LELF +M++ G+ PN  T    L         +
Sbjct: 198 DGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFS 257

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
            A+++H    +  G+  T V  AL++MY K   V DA  +F+ +++RD ++WN+M+    
Sbjct: 258 EALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANA 317

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF--- 313
            N  H +AF+ F  M L G   +R T+V+++  C     L+    + +  ++ G      
Sbjct: 318 CNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESV 377

Query: 314 DHNIRTGLMVAYSKCGKMEDA---SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           D  + T +M  YS+C   + A   S +    R+   ++ W  ++S +++N   + A   F
Sbjct: 378 DVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIF 437

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKK 426
             M   GV  +  +   +  A  + +  +    +H+ + ++   +   V  AL+  Y + 
Sbjct: 438 RLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARL 497

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G L++A ++F+ +  +++++W+AM+  ++Q+G    A++I+R +  EGV PNE TF++V+
Sbjct: 498 GSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVL 557

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           NAC    A++   K   AC  +      + V++ L+    K G++E  +  F+    ++ 
Sbjct: 558 NAC-GNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQ 616

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           VSWN+ I   AQHG+  + +E+F+ M+ + ++   +T IGV+++C+HAGLV +G  YF  
Sbjct: 617 VSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLN 676

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA-ASATVWRTVLAAC------ 659
           M  ++      EHYSC++DL SRAG LE A + + R+PF   S   W T+L  C      
Sbjct: 677 MHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDL 736

Query: 660 --------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                   R++ L P  +  Y+++ N+YA  G W E A VRK M +   KKE G SWIEV
Sbjct: 737 ERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEV 796

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           K + + F  GD SHP+S++I+ +LE L+  +K AG+  D   V+ D+  + KE++L QHS
Sbjct: 797 KGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGFVCDIKAVVYDLQAKEKESLLCQHS 856

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+LAIAFGL++T AG PL+I+KNLRVC DCH+  K IS L  R+IVVRD  RFHHF+ G 
Sbjct: 857 EKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGA 916

Query: 832 CSCGDYW 838
           CSC D+W
Sbjct: 917 CSCEDFW 923



 Score =  246 bits (627), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 168/598 (28%), Positives = 297/598 (49%), Gaps = 31/598 (5%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           ST ++++  C  L D   GR++H   +++G      +   L+ +Y +  + E+ R VF  
Sbjct: 41  STFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQG 100

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           + + +VV+WTSL+   AR+        LF  MQ++G+ PN  T+  VLG       V T 
Sbjct: 101 IQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDT- 159

Query: 199 VQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             +   V   G  E+   V  A+++ Y K   +  A  VFDG+  RD+  WN+M++  V 
Sbjct: 160 --IRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVA 217

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +E   EA E F  M L G    + T V+ +  C  +++   A ++H+   +   D D  +
Sbjct: 218 HEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVV 277

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
           +T L+  Y K GK++DA +IF  ++E +DVVSW AM++ +  NG  D A   F +M   G
Sbjct: 278 QTALVNMYGKFGKVDDAEEIFERIQE-RDVVSWNAMLTANACNGFHDKAFKCFREMLLVG 336

Query: 378 VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV-------------GTALLNAYV 424
             P+  TY  IL A        + AH+   ++ K+ +V             GTA++N Y 
Sbjct: 337 ELPSRITYVAILNA------CFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYS 390

Query: 425 K----KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           +    K     +  + +  D+  I+ W+ +L+ Y +    E A  I+R +   GV  +  
Sbjct: 391 RCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTV 450

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           +  +V NAC   SA++E+GK  H+   +++L     V +ALVTMY++ G++E A E+F  
Sbjct: 451 SLMTVFNAC-GSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDA 509

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              R+++SW +M+  ++Q G  ++AL +F+ +  + +  + +TF  V+ AC +   +   
Sbjct: 510 MTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASI-PA 568

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            +     ++E   +  +E  + ++    + G LE+  +    M      + W T +AA
Sbjct: 569 AKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVS-WNTAIAA 625


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/670 (37%), Positives = 387/670 (57%), Gaps = 33/670 (4%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCN------ALISMYLKSKMVRDARAVFDGMEDRDSITW 248
           +    ++H MV        T  CN       +I+MY       D+R VFD +  ++   W
Sbjct: 121 IEVGRRLHEMV-----SASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQW 175

Query: 249 NSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           N++V+ Y  NEL  +A   F+ +  +   +    T   VIK CA   +L L + +H    
Sbjct: 176 NAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMAT 235

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASK-IFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           K  +  D  +   L+  Y KCG +E+A K +F +M + K V SW A++ G+ QN     A
Sbjct: 236 KMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLM-DTKTVSSWNALLCGYAQNSDPRKA 294

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
           ++ + QMT  G+ P+ FT   +L A   +       ++H   ++        +G +LL+ 
Sbjct: 295 LDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSL 354

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y+  G    A  +F+ ++ + +V+W+ M+AGY+Q G  + A+ ++RQ+ S+G++P E   
Sbjct: 355 YICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAI 414

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
             V  AC+  SA +  GK+ H  ++KA L   + VSS+++ MY+K G I  +  +F R R
Sbjct: 415 MCVCGACSQLSA-LRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR 473

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           ++D+ SWN +I GY  HG  K+ALE+F++M R  L+ D  TF G++ AC+HAGLV++G +
Sbjct: 474 EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLE 533

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-- 660
           YF+ M+N H+I P +EHY+C+VD+  RAG ++ A+ +I  MP    + +W ++L++CR  
Sbjct: 534 YFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIH 593

Query: 661 ------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                       L+ L+P     YVL+SN++A +G W +  RVR  M D  ++K+AG SW
Sbjct: 594 GNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSW 653

Query: 709 IEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILS 768
           IEV  K ++FL GD   P+  ++      L  ++   GY PDT  VL D+++E K  IL 
Sbjct: 654 IEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILR 713

Query: 769 QHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            HSE+LAI+FGL+ T  G P+++ KNLR+CGDCH   K ISK+  RDIVVRD  RFHHF+
Sbjct: 714 GHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFR 773

Query: 829 EGLCSCGDYW 838
           +G+CSCGDYW
Sbjct: 774 DGICSCGDYW 783



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 249/492 (50%), Gaps = 21/492 (4%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSG--FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +L+ CG   D   GR++H E V +   F  D  ++T ++ +Y    +  D R VFD +  
Sbjct: 111 LLQACGQRKDIEVGRRLH-EMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
            N+  W +++S Y RN++ +  + +F  +  V   KP++FT   V+   A    +     
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 229

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA-RAVFDGMEDRDSITWNSMVAGYVTNE 259
           +H M  K        V NALI+MY K  +V +A + VFD M+ +   +WN+++ GY  N 
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A + +  M  +G +    T  S++  C+  K L    ++H   L+NG+  D  I  
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y  CGK   A  +F  M E + +VSW  MI+G+ QNG  D A+N F QM  +G++
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGM-EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ 408

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P       +  A   +S      ++H   +K +  +   V +++++ Y K G +  + ++
Sbjct: 409 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 468

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + EKD+ +W+ ++AGY   G  + A++++ ++   G+KP++FTF+ ++ AC+  +  
Sbjct: 469 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH-AGL 527

Query: 496 VEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSW 549
           VE G ++     +  +I+ KL +  CV    V M  + G I+ A  + +      D   W
Sbjct: 528 VEDGLEYFNQMLNLHNIEPKLEHYTCV----VDMLGRAGRIDDALRLIEEMPGDPDSRIW 583

Query: 550 NSMICGYAQHGH 561
           +S++     HG+
Sbjct: 584 SSLLSSCRIHGN 595



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 230/469 (49%), Gaps = 28/469 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTCGC 90
           +FD+  ++N  ++N ++  Y R+ L ++A+++F   + +       F  TL  V+K C  
Sbjct: 163 VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNF--TLPCVIKACAG 220

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG-RRVFDDMNESNVVSWTS 149
           L D   G+ +H    K     DV V  +L+ +Y +   VE+  +RVFD M+   V SW +
Sbjct: 221 LLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNA 280

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           LL GYA+N    + L+L+ +M   G+ P+ FT  ++L   +    +    ++H   ++NG
Sbjct: 281 LLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG 340

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             V   +  +L+S+Y+       A+ +FDGME R  ++WN M+AGY  N L  EA   F 
Sbjct: 341 LAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFR 400

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G +      + V   C+    LRL ++LH   LK  +  D  + + ++  Y+K G
Sbjct: 401 QMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGG 460

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +  + +IF  +RE KDV SW  +I+G+  +G    A+  F +M R G++P+ FT++ IL
Sbjct: 461 CIGLSQRIFDRLRE-KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 519

Query: 390 TAQPAVSPFQVHAHIIKT------------NYEKSFSVGTALLNAYVKKGILDEAAKVF- 436
            A         HA +++             N E      T +++   + G +D+A ++  
Sbjct: 520 MACS-------HAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIE 572

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSS 484
           E+  + D   WS++L+     G+     K+  +L   E  KP  +   S
Sbjct: 573 EMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLIS 621



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 119/231 (51%), Gaps = 5/231 (2%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           PF +   Q LFD    R+ V +N ++  Y ++ L  EA+NLF  +   G+  +   +  V
Sbjct: 361 PFAA---QVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCV 417

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
              C  L     G+++HC  +K+    D+ VS+S++D+Y +   +   +R+FD + E +V
Sbjct: 418 CGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDV 477

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHT 203
            SW  +++GY  +      LELF +M   G+KP+ FTF+ +L   +  G+V   ++  + 
Sbjct: 478 ASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQ 537

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           M+  +  E        ++ M  ++  + DA  + + M  D DS  W+S+++
Sbjct: 538 MLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 279/779 (35%), Positives = 439/779 (56%), Gaps = 49/779 (6%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R VH +   S   RD+ V+T+L+D Y +   VE    VF  +   +++ W + +   A 
Sbjct: 150 ARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAG 209

Query: 157 N-KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--GEVV 213
           N +  DR L L  RM +EG+ PN  +F  +L    D   +  A  +H  V + G  G+VV
Sbjct: 210 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV 269

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL++MY +   V ++ AVF+ M  R+ ++WN+M+A +        AF  +  M  
Sbjct: 270 --VATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQ 327

Query: 274 AGAELTRSTFVSVIKLC--ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            G    + TFV+ +K    +++++L  +  LH  +   G++ D  + T L+  Y   G +
Sbjct: 328 EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAI 387

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A   F  +   K++VSW AM++ +  NG    A+  F  M R+ + PN  +Y  +L  
Sbjct: 388 DRARAAFDAI-PAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGC 446

Query: 392 QPAVSPFQ-VHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
              VS  + +HA ++    + +  S+   ++  + + G L+EA   F+    KD V+W+ 
Sbjct: 447 CEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNT 506

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            +A  +   D  GA+  +  +  EG +P++FT  SV++ C A    +E G+     SI+ 
Sbjct: 507 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVC-ADLGTLELGR-----SIQQ 560

Query: 510 KLNNAL------CVSSALVTMYSKKGN-IESASEVFKR--QRKRDLVSWNSMICGYAQHG 560
           +L+ A+       V SA++ M +K G+ ++    +F R    ++DLV+WN+MI  YAQHG
Sbjct: 561 QLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHG 620

Query: 561 HTKKALEVFKEMR-RQDLEFDGITFIGVITACTHAGLVDEGQQYF----DIMVNEHHIYP 615
           H +KAL++F+ M+ R  +  D  TF+ V++ C+HAGLV++G   F    +++  E     
Sbjct: 621 HGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQ--- 677

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            +EHY+C+VD+  R G L +A D I +MP  A + VW ++L AC                
Sbjct: 678 PVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAF 737

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA-GYSWIEVKNKTYSFLA 720
           I L   DS  YV+LSN+YAA G W++  RVR+ M +R+VKK A G S I VKN+ + F A
Sbjct: 738 IELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFA 797

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
            D SHPQS++IY++LE L   +++AGY PDT  VL D+++E KE +L  HSE+LAIAFGL
Sbjct: 798 RDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGL 857

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
           ++ P    ++++KNLRVC DCHT  K I+++ +R+I VRD NRFHHF K+G CSCGDYW
Sbjct: 858 ISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 163/651 (25%), Positives = 291/651 (44%), Gaps = 47/651 (7%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL+ +L+ C    D   GRQ+H + VK G AR+  +   LV +Y +  +++D    F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI---KPNSFTFSTVLGVLAD----- 191
               + +W +L++  +       V +L+ RM++E     +PN  T   VLG +A      
Sbjct: 86  RSRGIATWNTLIAAQSSPAA---VFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 192 -EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
                A A  VH  +  +  E    V  AL+  Y K   V  A  VF  ++  D I WN+
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNA 202

Query: 251 MVAGYVTNELHME-AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
            +     N+   + A      M L G    R++FV+++  C     L LAR +H++V + 
Sbjct: 203 AIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEEL 262

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           G   D  + T L+  Y +CG ++++  +F  M  +++ VSW AMI+   Q G    A   
Sbjct: 263 GFLGDVVVATALVTMYGRCGSVDESIAVFEAM-AVRNHVSWNAMIAAFAQCGHRSAAFAI 321

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVS------PFQVHAHIIKTNYEKSFSVGTALLNAY 423
           + +M +EG RPN  T+   L A  + S         +H  I     E    VGTAL+  Y
Sbjct: 322 YWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMY 381

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
              G +D A   F+ I  K+IV+W+AML  Y   G    A++++  +  + + PN+ ++ 
Sbjct: 382 GSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 441

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKL-NNALCVSSALVTMYSKKGNIESASEVFKRQR 542
           +V+  C      V + +  HA  +   L      +++ +V M+++ G++E A   F    
Sbjct: 442 AVLGCCE----DVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATV 497

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D VSWN+ +   +       A+  F  M+ +    D  T + V+  C   G ++ G+ 
Sbjct: 498 VKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRS 557

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAG-MLEKAMDIINRMPFAASATV-WRTVLAACR 660
               +     +   +   S ++++ ++ G  +++   +  RMP      V W T++AA  
Sbjct: 558 IQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA-- 615

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                             YA  GH ++  ++ ++M  R   +    +++ V
Sbjct: 616 ------------------YAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSV 648



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 252/532 (47%), Gaps = 26/532 (4%)

Query: 66  FLGIRRL---GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDL 122
            L +RR+   GL    ++  ++L +CG        R +H    + GF  DV V+T+LV +
Sbjct: 218 LLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTM 277

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           Y R  +V++   VF+ M   N VSW ++++ +A+         ++ RMQ EG +PN  TF
Sbjct: 278 YGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITF 337

Query: 183 STVLGVLADEGI--VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            T L          +  +  +H  +   G E    V  AL++MY  +  +  ARA FD +
Sbjct: 338 VTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAI 397

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             ++ ++WN+M+  Y  N    EA E F  M        + ++++V+  C    E   AR
Sbjct: 398 PAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---AR 454

Query: 301 QLHSQVLKNGI-DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            +H++V+ NG+   + +I  G++  +++ G +E+A   F     +KD VSW   ++    
Sbjct: 455 SIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDAT-VVKDSVSWNTKVAALSA 513

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIK-----TNYEKSFS 414
              +  A+  F  M  EG RP+ FT   ++     +   ++   I +        E+   
Sbjct: 514 REDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVV 573

Query: 415 VGTALLNAYVKKG-ILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           V +A++N   K G  +DE  ++F  +  D KD+VAW+ M+A YAQ G    A+K++R + 
Sbjct: 574 VESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQ 633

Query: 472 SE-GVKPNEFTFSSVINACTAPSAAVEQGKQ--FHACSIKAKLNNALCVSSALVTMYSKK 528
               V+P+  TF SV++ C+  +  VE G    F A  +       +   + LV +  + 
Sbjct: 634 QRSSVRPDSSTFVSVLSGCS-HAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRM 692

Query: 529 GNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT---KKALEVFKEMRRQD 576
           G +  A +  ++     D V W S++   + +G     ++A   F E+ R D
Sbjct: 693 GYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSD 744



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 166/372 (44%), Gaps = 44/372 (11%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + ++ FD  P +N V +N +L  Y  +   +EA+ LF  ++R  L        S L   G
Sbjct: 389 RARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSL---APNKVSYLAVLG 445

Query: 90  CLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           C  D    R +H E V +G FA++ +++  +V ++ R+ ++E+    FD     + VSW 
Sbjct: 446 CCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWN 505

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH---TMV 205
           + ++  +  +     +  F+ MQ EG +P+ FT  +V+ V AD G +     +    +  
Sbjct: 506 TKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAA 565

Query: 206 IKNGGEVVTSVCNALISMYLK-SKMVRDARAVFDGMED--RDSITWNSMVAGYVTNELHM 262
           I+   +VV  V +A+++M  K    V +   +F  M D  +D + WN+M+A Y  +    
Sbjct: 566 IEVERDVV--VESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGR 623

Query: 263 EAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           +A + F  M   +      STFVSV+  C+           H+ ++++GI      R  L
Sbjct: 624 KALKLFRIMQQRSSVRPDSSTFVSVLSGCS-----------HAGLVEDGIHCFFLAREVL 672

Query: 322 MV-------------AYSKCGKMEDASKIFSMMREMKDVVSWTAMIS-----GHLQNGAI 363
            +                + G + +A      M    D V WT+++      G L+ G  
Sbjct: 673 GIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGG-- 730

Query: 364 DLAVNFFCQMTR 375
           + A   F ++ R
Sbjct: 731 ERAARAFIELYR 742


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 270/753 (35%), Positives = 417/753 (55%), Gaps = 117/753 (15%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY----- 255
           VH  +IK G  +   + N L++ Y K+  +R A  VFD M  + + +WN++++GY     
Sbjct: 32  VHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGN 91

Query: 256 --VTNELHME-----------------AFETFNNMGLAGAEL-------TRSTFVSVIKL 289
             V+  L  E                  F  F+N     A++       ++ T  +V+  
Sbjct: 92  FEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSS 151

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG-------------------- 329
           CA  + L + R++HS V+K G+     + T L+  Y+KCG                    
Sbjct: 152 CAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTW 211

Query: 330 -----------KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-G 377
                      + E A+  F  M + +D+VSW +MISG+ Q G    A+  F +M  E  
Sbjct: 212 NALISLYMQSGQFELAASQFEKMPD-RDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPS 270

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG------ 427
           ++P+ FT + IL+A   +       Q+HA+I++   E S +VG AL++ Y K G      
Sbjct: 271 LKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIAR 330

Query: 428 ------------------ILD---------EAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
                             +LD          A ++F  + ++D+VAW+AM+ GY Q G  
Sbjct: 331 LIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLW 390

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A++++R + +EG +PN +T +++++  ++ +  +E GKQ HA +IKA  ++   V++A
Sbjct: 391 NDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI-LEHGKQIHASAIKAGESSTPSVTNA 449

Query: 521 LVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           L+ MY+K GNI  A  VF     K+++VSW SMI   AQHG  K+A+ +F+ M    ++ 
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           D IT++GV++ACTH GLV++G++Y+++M   H I PT+ HY+CM+DLY RAG+L++A   
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569

Query: 640 INRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHW 685
           I  MP       W ++LA+C              RL+ + P +S  Y+ L+N+Y+A G W
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
           +  A+ RKLM DR V+KE G SWI +KN+ ++F   D+ HPQ ++IY  + E+   +K  
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKM 689

Query: 746 GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVI 805
           G+ PDT  VL D+++E KE IL  HSE+LAIAFGL+ TP    L+I+KNLRVC DCH+ I
Sbjct: 690 GFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAI 749

Query: 806 KLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           K ISKL  R+I+VRD  RFHHFK+G CSC DYW
Sbjct: 750 KFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 277/589 (47%), Gaps = 107/589 (18%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN------- 127
           P      + +L+T   + D   GR VHC+ +K G    V +  +L+  Y +T        
Sbjct: 7   PTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHH 66

Query: 128 ------------------------NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
                                   N E  RR+  +M + + VSWT+++ GY +  + D  
Sbjct: 67  VFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNA 126

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-------------- 209
           + +F +M  E + P+ FT S VL   A    +    ++H+ V+K G              
Sbjct: 127 IWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNM 186

Query: 210 ----GEVV-------------TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
               G+ V              S  NALIS+Y++S     A + F+ M DRD ++WNSM+
Sbjct: 187 YAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMI 246

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLK-- 308
           +GY     ++EA   F+ M L    L    F   S++  CA  ++L + +Q+H+ +L+  
Sbjct: 247 SGYSQQGYNLEALAIFSKM-LNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAE 305

Query: 309 ------------------NGIDF-----DHN--------IRTGLMVAYSKCGKMEDASKI 337
                              G++      +HN          T L+  Y+K G ++ A +I
Sbjct: 306 TETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ +R+ +DVV+WTAMI G++QNG  + A+  F  M  EG  PN +T + +L+   +++ 
Sbjct: 366 FNKLRD-RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLA 452
                Q+HA  IK     + SV  AL+  Y K G ++ A +VF+L + +K+IV+W++M+ 
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIM 484

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA-KL 511
             AQ G  + A+ ++ ++ S G+KP+  T+  V++ACT     VEQG++++    +  ++
Sbjct: 485 ALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTH-VGLVEQGRKYYNMMTEVHEI 543

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
              L   + ++ +Y + G ++ A    +    + D ++W S++     H
Sbjct: 544 EPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 218/494 (44%), Gaps = 79/494 (15%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           L    P  + V +  ++  Y +  L   A+ +F  +    +P    T+S+VL +C     
Sbjct: 98  LLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQT 157

Query: 94  HVFGRQVHCECVKSGFARDVNVSTS-------------------------------LVDL 122
              GR++H   VK G    V V+TS                               L+ L
Sbjct: 158 LDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISL 217

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFT 181
           YM++   E     F+ M + ++VSW S++SGY++   N   L +F +M  E  +KP++FT
Sbjct: 218 YMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFT 277

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS-------------- 227
            +++L   A+   +    Q+H  +++   E   +V NALISMY KS              
Sbjct: 278 LASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNR 337

Query: 228 -------------------KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                                V+ AR +F+ + DRD + W +M+ GYV N L  +A E F
Sbjct: 338 TSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELF 397

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G E    T  +++ + ++   L   +Q+H+  +K G     ++   L+  Y+K 
Sbjct: 398 RLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKT 457

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  A ++F +    K++VSWT+MI    Q+G    A+N F +M   G++P+  TY  +
Sbjct: 458 GNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGV 517

Query: 389 LTAQPAVSPFQ---------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           L+A   V   +            H I    E + S    +++ Y + G+L EA    E +
Sbjct: 518 LSACTHVGLVEQGRKYYNMMTEVHEI----EPTLSHYACMIDLYGRAGLLQEAYLFIESM 573

Query: 440 D-EKDIVAWSAMLA 452
             E D +AW ++LA
Sbjct: 574 PIEPDNIAWGSLLA 587



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 221/497 (44%), Gaps = 91/497 (18%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M +  +  +   F  +++     K+    R +H Q++K G+     +   LM  Y+K G 
Sbjct: 1   MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60

Query: 331 MEDASKIFS----------------------------MMREMKDV--VSWTAMISGHLQN 360
           +  A  +F                             ++ EM D   VSWTA+I G+ Q 
Sbjct: 61  LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG 416
           G  D A+  F +M  E V P+ FT S +L++  A        ++H+ ++K        V 
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180

Query: 417 TALLNAYVK-------------------------------KGILDEAAKVFELIDEKDIV 445
           T+LLN Y K                                G  + AA  FE + ++DIV
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           +W++M++GY+Q G    A+ I+ ++ +E  +KP+ FT +S+++AC A    +  GKQ HA
Sbjct: 241 SWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSAC-ANLEKLNIGKQIHA 299

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL--VSWNSMICGYAQHGHT 562
             ++A+   +  V +AL++MY+K G +E A  + +  R  +L  +++ S++ GY + G+ 
Sbjct: 300 YILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNV 359

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           K A E+F ++R +D+    + +  +I      GL ++  + F +MVNE    P     + 
Sbjct: 360 KPAREIFNKLRDRDV----VAWTAMIVGYVQNGLWNDALELFRLMVNEGP-EPNSYTLAA 414

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAAT 682
           M+ + S   +LE    I                  A  + + +    ++   L  MYA T
Sbjct: 415 MLSVSSSLTILEHGKQI-----------------HASAIKAGESSTPSVTNALIAMYAKT 457

Query: 683 GHWQERARVRKLMNDRK 699
           G+     RV  L N +K
Sbjct: 458 GNINVAKRVFDLPNGKK 474



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 170/372 (45%), Gaps = 40/372 (10%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTCG 89
           S F++ P R+ V +N ++  Y +   + EAL +F   + L  P       TL+S+L  C 
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIF--SKMLNEPSLKPDNFTLASILSACA 286

Query: 90  CLFDHVFGRQVH-----CECVKSGFARDVNVS---------------------------- 116
            L     G+Q+H      E   SG   +  +S                            
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAF 346

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           TSL+D Y +  NV+  R +F+ + + +VV+WT+++ GY +N + +  LELF  M  EG +
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPE 406

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           PNS+T + +L V +   I+    Q+H   IK G     SV NALI+MY K+  +  A+ V
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRV 466

Query: 237 FDGMEDRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           FD    +  I +W SM+     + L  EA   F  M   G +    T+V V+  C     
Sbjct: 467 FDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGL 526

Query: 296 LRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +   R+ ++ + + + I+   +    ++  Y + G +++A      M    D ++W +++
Sbjct: 527 VEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLL 586

Query: 355 SGHLQNGAIDLA 366
           +    +   DLA
Sbjct: 587 ASCKIHKNADLA 598


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 263/666 (39%), Positives = 388/666 (58%), Gaps = 32/666 (4%)

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
           A A  +H + +  G    T V +AL  +Y K     DAR VFD +   D+I WN+++AG 
Sbjct: 131 AAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGL 190

Query: 256 VTNELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
             +E    A E F  M  AG      +T  S ++  A    + + R +H   +K G+   
Sbjct: 191 PGSE----ALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEH 246

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
            ++ TGLM  YSKCG M+ A  +F  M +  D+V++ A+ISG+  NG ++ +V  F ++T
Sbjct: 247 EHVVTGLMSLYSKCGDMDSAQFLFDRM-DNPDLVAYNALISGYSVNGMVESSVELFKELT 305

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKG 427
             G RPN    S ++   P  SPF        +HA ++K   +    V TAL   Y +  
Sbjct: 306 ASGWRPNS---STLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLN 362

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            ++ A  +F+ + EK + +W+AM++GYAQ G TE AV +++ +    V+PN  T SS ++
Sbjct: 363 DMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLS 422

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           AC A   A+  GK  H    K KL   + V +AL+ MY+K G+I  A  +F R   +++V
Sbjct: 423 AC-AHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVV 481

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SWN+MI GY  HG   +AL+++K+M    +     TF+ VI AC+H GLVDEGQ+ F +M
Sbjct: 482 SWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVM 541

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA-SATVWRTVLAAC------- 659
            NE+ I P +EH +CMVDL  RAG L +A+++I+  P +A    VW  +L AC       
Sbjct: 542 TNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSD 601

Query: 660 -------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                  +L  L   ++  YVLLSN+Y +  H+ E A VR+    RK+ K  G + IE+ 
Sbjct: 602 LAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIG 661

Query: 713 NKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSE 772
           ++ + F+AGD  HPQS  IYS LE L+ ++ +AGY+P T   L D+++E KE ++  HSE
Sbjct: 662 DRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSE 721

Query: 773 RLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLC 832
           +LAIAFGL++T  G  ++I+KNLRVC DCH   K ISK+ +R IVVRD +RFHHF++G+C
Sbjct: 722 KLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVC 781

Query: 833 SCGDYW 838
           SCGDYW
Sbjct: 782 SCGDYW 787



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/451 (31%), Positives = 226/451 (50%), Gaps = 10/451 (2%)

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D    R +H   V +G+A D  V+++L  LY + +  +D R+VFD +   + + W +LL+
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188

Query: 153 GYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           G          LE F RM   G ++P+S T ++ L   A+   +A    VH   +K G  
Sbjct: 189 GLP----GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLA 244

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V   L+S+Y K   +  A+ +FD M++ D + +N++++GY  N +   + E F  +
Sbjct: 245 EHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKEL 304

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G     ST V+VI + +      LAR LH+ V+K  +D D  + T L   Y +   M
Sbjct: 305 TASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDM 364

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E A  IF  M E K + SW AMISG+ QNG  ++AV  F  M    V+PN  T S  L+A
Sbjct: 365 ESARSIFDAMLE-KTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSA 423

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +        VH  I K   E +  V TAL++ Y K G + EA  +F+ +D K++V+W
Sbjct: 424 CAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSW 483

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AM++GY   G    A+K+Y+ +    + P   TF SVI AC+      E  K F   + 
Sbjct: 484 NAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTN 543

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           + ++   +   + +V +  + G +  A E+ 
Sbjct: 544 EYRITPGIEHCTCMVDLLGRAGKLNEALELI 574



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 177/361 (49%), Gaps = 6/361 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCGC 90
           + +FD  P  + + +N LL          EAL  F+ +   G +    +TL+S L+    
Sbjct: 169 RKVFDTVPSPDTILWNTLLAGLP----GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAE 224

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                 GR VH   VK G A   +V T L+ LY +  +++  + +FD M+  ++V++ +L
Sbjct: 225 ASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNAL 284

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SGY+ N M +  +ELF  +   G +PNS T   V+ V +  G    A  +H  V+K   
Sbjct: 285 ISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARL 344

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    V  AL ++Y +   +  AR++FD M ++   +WN+M++GY  N L   A   F  
Sbjct: 345 DADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQL 404

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M     +    T  S +  CA    L L + +H  + K  ++ +  + T L+  Y+KCG 
Sbjct: 405 MQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGS 464

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           + +A  IF  M + K+VVSW AMISG+  +G    A+  +  M    + P   T+  ++ 
Sbjct: 465 IAEARSIFDRM-DNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIY 523

Query: 391 A 391
           A
Sbjct: 524 A 524



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 139/260 (53%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFDR    + V YN L+  Y  + + + ++ LF  +   G     STL +V+      
Sbjct: 267 QFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPF 326

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              +  R +H   VK+    D  VST+L  LY R N++E  R +FD M E  + SW +++
Sbjct: 327 GHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMI 386

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+N + +  + LF  MQ   ++PN  T S+ L   A  G ++    VH ++ K   E
Sbjct: 387 SGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLE 446

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V  ALI MY K   + +AR++FD M++++ ++WN+M++GY  +    EA + + +M
Sbjct: 447 LNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDM 506

Query: 272 GLAGAELTRSTFVSVIKLCA 291
             A    T STF+SVI  C+
Sbjct: 507 LDARILPTSSTFLSVIYACS 526



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 5/194 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FD   ++    +N ++  Y ++ L + A+ LF  ++ L +     T+SS L  C  L
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHL 427

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH    K     +V V T+L+D+Y +  ++ + R +FD M+  NVVSW +++
Sbjct: 428 GALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMI 487

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-----GVLADEGIVATAVQVHTMVI 206
           SGY  +      L+L+  M    I P S TF +V+     G L DEG     V  +   I
Sbjct: 488 SGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRI 547

Query: 207 KNGGEVVTSVCNAL 220
             G E  T + + L
Sbjct: 548 TPGIEHCTCMVDLL 561


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 282/822 (34%), Positives = 433/822 (52%), Gaps = 96/822 (11%)

Query: 37  RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
           R+  R   +YN  +  +C+    + A+ L    ++  L     T SSVL+ C        
Sbjct: 60  RTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELET--KTYSSVLQLCAGSKSLTD 117

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH     +  A D  +   LV LY    ++++GRRVFD M + NV  W  ++S YA 
Sbjct: 118 GKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA- 176

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAVQVHTMVIKNGGEVVTS 215
                              K   F  S  L  ++ ++GI                     
Sbjct: 177 -------------------KIGDFKESICLFKIMVEKGI--------------------- 196

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
                     + K    A  +FD + DRD I+WNSM++GYV+N L     E +  M   G
Sbjct: 197 ----------EGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLG 246

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            ++  +T +SV+  CA +  L L + +HS  +K+  +   N    L+  YSKCG ++ A 
Sbjct: 247 IDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGAL 306

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F  M E ++VVSWT+MI+G+ ++G  D A+    QM +EGV+ +    + IL A    
Sbjct: 307 RVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARS 365

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                   VH +I   N E +  V  AL++ Y K G +D A  VF  +  KDI++W+ M 
Sbjct: 366 GSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTM- 424

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
                IG+               +KP+  T + ++ AC + SA +E+GK+ H   ++   
Sbjct: 425 -----IGE---------------LKPDSRTMACILPACASLSA-LERGKEIHGYILRNGY 463

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           ++   V++ALV +Y K G +  A  +F     +DLVSW  MI GY  HG+  +A+  F E
Sbjct: 464 SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNE 523

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           MR   +E D ++FI ++ AC+H+GL+++G ++F IM N+ +I P +EHY+CMVDL SR G
Sbjct: 524 MRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
            L KA + I  +P A  AT+W  +L  CR+                L+P ++  YVLL+N
Sbjct: 584 NLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLAN 643

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG-DISHPQSNQIYSKLE 736
           +YA    W+E  R+R+ +  + ++K  G SWIE+K K   F++G + SHP S +I S L+
Sbjct: 644 IYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLK 703

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           ++  ++K+ GY P T Y L + D+  KE  L  HSE+LA+AFGL+A P    +++ KNLR
Sbjct: 704 KMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLR 763

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VCGDCH + K +SK  RR+IV+RD+NRFHHFK G CSC  +W
Sbjct: 764 VCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 213/439 (48%), Gaps = 28/439 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+   R+ + +N ++  Y  + L +  L ++  +  LG+ +  +T+ SVL  C     
Sbjct: 207 LFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGT 266

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ VH   +KS F R +N S +L+D+Y +  +++   RVF+ M E NVVSWTS+++G
Sbjct: 267 LSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y R+  +D  + L  +M+ EG+K +    +++L   A  G +     VH  +  N  E  
Sbjct: 327 YTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESN 386

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             VCNAL+ MY K   +  A +VF  M  +D I+WN+M+      EL  ++         
Sbjct: 387 LFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG-----ELKPDS--------- 432

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   T   ++  CA+   L   +++H  +L+NG   D ++   L+  Y KCG +  
Sbjct: 433 -------RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL 485

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F M+   KD+VSWT MISG+  +G  + A+  F +M   G+ P+  ++  IL A  
Sbjct: 486 ARLLFDMIPS-KDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544

Query: 394 AVSPFQV---HAHIIKT--NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAW 447
                +      +I+K   N E        +++   + G L +A +  E +    D   W
Sbjct: 545 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIW 604

Query: 448 SAMLAGYAQIGDTEGAVKI 466
            A+L G     D E A K+
Sbjct: 605 GALLCGCRIYHDIELAEKV 623


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/801 (34%), Positives = 445/801 (55%), Gaps = 52/801 (6%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM- 139
           L +++  C CL +   GR++H +     F  +  +  +L+ +Y +  ++ D ++ FD + 
Sbjct: 10  LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 69

Query: 140 --NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP-NSFTFSTVLGVLADEGIVA 196
             ++ +VV+W +++S + RN      L+LF  M  +G  P NS TF +VL    + G+++
Sbjct: 70  RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLS 129

Query: 197 --TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS----ITWNS 250
                 +H  ++  G E    V  AL+  Y K   + DA  VF    D +     +T ++
Sbjct: 130 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSA 189

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC-------ATTKELRLARQLH 303
           M++    N    E+   F  M L G + +  T VSV+  C       AT   L  A ++ 
Sbjct: 190 MISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVV 249

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           S         D+ + T L+  Y++   +  A   F  ++   DVVSW AM + +LQ+   
Sbjct: 250 SATR------DNVLGTTLLTTYARSNDLSRARATFDAIQS-PDVVSWNAMAAAYLQHHRP 302

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP-------FQVHAHIIKTNYEKSFSVG 416
             A+  F +M  EGVRP+  T+   LTA  A  P        ++ + + +   E   +V 
Sbjct: 303 REALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVA 362

Query: 417 TALLNAYVKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
            A LN Y K G L +A  VFE I    +D + W++MLA Y   G  + A ++++ + +E 
Sbjct: 363 NATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEK 422

Query: 475 -VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            VKPN+ TF +V++A T+ ++ + QG++ HA  +     +   + +AL+ MY+K G+++ 
Sbjct: 423 LVKPNKVTFVAVLDASTSRTS-IAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDD 481

Query: 534 ASEVFKRQ--RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           A  +F +    + D+++W S++ GYAQ+G  ++AL++F  M++Q +  + ITFI  +TAC
Sbjct: 482 AQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTAC 541

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
            H G +++G +    M  +H I P  +H+SC+VDL  R G L++A  ++ R    A    
Sbjct: 542 NHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVIT 600

Query: 652 WRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
           W  +L AC              R++ L P  ++ Y++L++MYAA G W E A +RK M D
Sbjct: 601 WMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLD 660

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
           + ++ + G S +EV  + +SF AGD SHP+S +IY +LE L   +K AGY  DT  VL D
Sbjct: 661 KGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHD 720

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           +  EHKE +L +HSE+LAIAFGL++TP+G+PL+++KNLRVC DCHT  KLISK+  RDI+
Sbjct: 721 VSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDIL 780

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           +RD++R+HHF  G CSCGDYW
Sbjct: 781 MRDSSRYHHFTSGTCSCGDYW 801



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 277/552 (50%), Gaps = 44/552 (7%)

Query: 35  FDRSP---QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTC-- 88
           FDR P   +R+ V +N ++  + R+   +EAL LF  +   G P   S T  SVL +C  
Sbjct: 65  FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF----DDMNESNV 144
             L      R +H   V +G  R+  V T+LVD Y +  +++D   VF    D+   +++
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI-VATAVQVHT 203
           V+ ++++S   +N      L LF+ M +EG KP+  T  +VL   +   +  ATA     
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATA----- 239

Query: 204 MVIKNGGEVVTS-----VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            V++   EVV++     +   L++ Y +S  +  ARA FD ++  D ++WN+M A Y+ +
Sbjct: 240 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQH 299

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT---TKELRLARQLHSQVLKNGIDFDH 315
               EA   F  M L G   + +TF++ +  CA         + +++ S + + G++ D 
Sbjct: 300 HRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDT 359

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
            +    +  Y+KCG + DA  +F  +    +D ++W +M++ +  +G    A   F  M 
Sbjct: 360 AVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAME 419

Query: 375 REG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
            E  V+PN  T+  +L A  + +      ++HA ++   +E    +  ALLN Y K G L
Sbjct: 420 AEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSL 479

Query: 430 DEAAKVFE--LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
           D+A  +F+    +++D++AW++++AGYAQ G  E A+K++  +  +GV+PN  TF S + 
Sbjct: 480 DDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALT 539

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA------LVTMYSKKGNIESASEVFKRQ 541
           AC         GK    C + + +     +  A      +V +  + G ++ A ++ +R 
Sbjct: 540 ACN------HGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERT 593

Query: 542 RKRDLVSWNSMI 553
            + D+++W +++
Sbjct: 594 SQADVITWMALL 605



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 249/487 (51%), Gaps = 20/487 (4%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           ++PN      ++   +  G +A   ++H+ +     E  + + NALISMY K   + DA+
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 235 AVFDGM---EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLC 290
             FD +     RD +TWN+M++ ++ N    EA + F +M   GA    S TFVSV+  C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 291 ATTKELRL--ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF---SMMREMK 345
                L L   R +H +++  GI+ +  +RT L+ +Y K G ++DA ++F   S      
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
            +V+ +AMIS   QNG    ++  F  M  EG +P+G T   +L A   +      A ++
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVL 242

Query: 406 KTNYE-----KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           +   E     +   +GT LL  Y +   L  A   F+ I   D+V+W+AM A Y Q    
Sbjct: 243 EQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRP 302

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTA--PSAAVEQGKQFHACSIKAKLNNALCVS 518
             A+ ++ ++  EGV+P+  TF + + AC A  P  A   GK+  +   +A L     V+
Sbjct: 303 REALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVA 362

Query: 519 SALVTMYSKKGNIESASEVFKR--QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           +A + MY+K G++  A  VF+R    +RD ++WNSM+  Y  HG  K+A E+F+ M  + 
Sbjct: 363 NATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEK 422

Query: 577 L-EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
           L + + +TF+ V+ A T    + +G++    +V+      T+   + ++++Y++ G L+ 
Sbjct: 423 LVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQ-NALLNMYAKCGSLDD 481

Query: 636 AMDIINR 642
           A  I ++
Sbjct: 482 AQAIFDK 488



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 156/339 (46%), Gaps = 20/339 (5%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + ++ FD     + V +N +   Y +    +EAL LF  +   G+    +T  + L  C 
Sbjct: 273 RARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACA 332

Query: 90  CLFDHV---FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES--NV 144
                     G+++     ++G   D  V+ + +++Y +  ++ D R VF+ ++ +  + 
Sbjct: 333 AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDC 392

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           ++W S+L+ Y  + +     ELF  M+ E  +KPN  TF  VL        +A   ++H 
Sbjct: 393 ITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHA 452

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD--GMEDRDSITWNSMVAGYVTNELH 261
            V+ NG E  T + NAL++MY K   + DA+A+FD       D I W S+VAGY      
Sbjct: 453 RVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQA 512

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG- 320
             A + F  M   G      TF+S +  C    +L    +L S     G+  DH I    
Sbjct: 513 ERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGCELLS-----GMTPDHGIVPAS 567

Query: 321 -----LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
                ++    +CG++++A K+     +  DV++W A++
Sbjct: 568 KHFSCIVDLLGRCGRLDEAEKLLERTSQ-ADVITWMALL 605


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/753 (35%), Positives = 417/753 (55%), Gaps = 117/753 (15%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY----- 255
           VH  +IK G  +   + N L++ Y K+  +R A  VFD M  + + +WN++++GY     
Sbjct: 32  VHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGN 91

Query: 256 --VTNELHME-----------------AFETFNNMGLAGAEL-------TRSTFVSVIKL 289
             V+  L  E                  F  F+N     A++       ++ T  +V+  
Sbjct: 92  FEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSS 151

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG-------------------- 329
           CA  + L + R++HS V+K G+     + T L+  Y+KCG                    
Sbjct: 152 CAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTW 211

Query: 330 -----------KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-G 377
                      + E A+  F  M + +D+VSW +MISG+ Q G    A+  F +M  E  
Sbjct: 212 NALISLYMQSGQFELAASQFEKMPD-RDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPS 270

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG------ 427
           ++P+ FT + IL+A   +       Q+HA+I++   E S +VG AL++ Y K G      
Sbjct: 271 LKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIAR 330

Query: 428 ------------------ILD---------EAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
                             +LD          A ++F  + ++D+VAW+AM+ GY Q G  
Sbjct: 331 LIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLW 390

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A++++R + +EG +PN +T +++++  ++ +  +E GKQ HA +IKA  ++   V++A
Sbjct: 391 NDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI-LEHGKQIHASAIKAGESSTPSVTNA 449

Query: 521 LVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           L+ MY+K GNI  A  VF     K+++VSW SMI   AQHG  K+A+ +F+ M    ++ 
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           D IT++GV++ACTH GLV++G++Y+++M   H I PT+ HY+CM+DLY RAG+L++A   
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569

Query: 640 INRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHW 685
           I  MP       W ++LA+C              RL+ + P +S  Y+ L+N+Y+A G W
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
           +  A+ RKLM DR V+KE G SWI +KN+ ++F   D+ HPQ ++IY  + E+   +K  
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKM 689

Query: 746 GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVI 805
           G+ PDT  VL D+++E KE IL  HSE+LAIAFGL+ TP    L+I+KNLRVC DCH+ I
Sbjct: 690 GFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSAI 749

Query: 806 KLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           K ISKL  R+I+VRD  RFHHFK+G CSC DYW
Sbjct: 750 KFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 277/589 (47%), Gaps = 107/589 (18%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN------- 127
           P      + +L+T   + D   GR VHC+ +K G    V +  +L+  Y +T        
Sbjct: 7   PTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHH 66

Query: 128 ------------------------NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
                                   N E  RR+  +M + + VSWT+++ GY +  + D  
Sbjct: 67  VFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNA 126

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-------------- 209
           + +F +M  E + P+ FT S VL   A    +    ++H+ V+K G              
Sbjct: 127 IWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNM 186

Query: 210 ----GEVV-------------TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
               G+ V              S  NALIS+Y++S     A + F+ M DRD ++WNSM+
Sbjct: 187 YAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMI 246

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLK-- 308
           +GY     ++EA   F+ M L    L    F   S++  CA  ++L + +Q+H+ +L+  
Sbjct: 247 SGYSQQGYNLEALVIFSKM-LNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAE 305

Query: 309 ------------------NGIDF-----DHN--------IRTGLMVAYSKCGKMEDASKI 337
                              G++      +HN          T L+  Y+K G ++ A +I
Sbjct: 306 TETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREI 365

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ +R+ +DVV+WTAMI G++QNG  + A+  F  M  EG  PN +T + +L+   +++ 
Sbjct: 366 FNKLRD-RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTI 424

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLA 452
                Q+HA  IK     + SV  AL+  Y K G ++ A +VF+L + +K+IV+W++M+ 
Sbjct: 425 LEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIM 484

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA-KL 511
             AQ G  + A+ ++ ++ S G+KP+  T+  V++ACT     VEQG++++    +  ++
Sbjct: 485 ALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTH-VGLVEQGRKYYNMMTEVHEI 543

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
              L   + ++ +Y + G ++ A    +    + D ++W S++     H
Sbjct: 544 EPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIH 592



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 218/494 (44%), Gaps = 79/494 (15%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           L    P  + V +  ++  Y +  L   A+ +F  +    +P    T+S+VL +C     
Sbjct: 98  LLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQT 157

Query: 94  HVFGRQVHCECVKSGFARDVNVSTS-------------------------------LVDL 122
              GR++H   VK G    V V+TS                               L+ L
Sbjct: 158 LDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISL 217

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFT 181
           YM++   E     F+ M + ++VSW S++SGY++   N   L +F +M  E  +KP++FT
Sbjct: 218 YMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFT 277

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS-------------- 227
            +++L   A+   +    Q+H  +++   E   +V NALISMY KS              
Sbjct: 278 LASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNR 337

Query: 228 -------------------KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                                V+ AR +F+ + DRD + W +M+ GYV N L  +A E F
Sbjct: 338 TSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELF 397

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G E    T  +++ + ++   L   +Q+H+  +K G     ++   L+  Y+K 
Sbjct: 398 RLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKT 457

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  A ++F +    K++VSWT+MI    Q+G    A+N F +M   G++P+  TY  +
Sbjct: 458 GNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGV 517

Query: 389 LTAQPAVSPFQ---------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           L+A   V   +            H I    E + S    +++ Y + G+L EA    E +
Sbjct: 518 LSACTHVGLVEQGRKYYNMMTEVHEI----EPTLSHYACMIDLYGRAGLLQEAYLFIESM 573

Query: 440 D-EKDIVAWSAMLA 452
             E D +AW ++LA
Sbjct: 574 PIEPDNIAWGSLLA 587



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 221/497 (44%), Gaps = 91/497 (18%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M +  +  +   F  +++     K+    R +H Q++K G+     +   LM  Y+K G 
Sbjct: 1   MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60

Query: 331 MEDASKIFS----------------------------MMREMKDV--VSWTAMISGHLQN 360
           +  A  +F                             ++ EM D   VSWTA+I G+ Q 
Sbjct: 61  LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG 416
           G  D A+  F +M  E V P+ FT S +L++  A        ++H+ ++K        V 
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180

Query: 417 TALLNAYVK-------------------------------KGILDEAAKVFELIDEKDIV 445
           T+LLN Y K                                G  + AA  FE + ++DIV
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           +W++M++GY+Q G    A+ I+ ++ +E  +KP+ FT +S+++AC A    +  GKQ HA
Sbjct: 241 SWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSAC-ANLEKLNIGKQIHA 299

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL--VSWNSMICGYAQHGHT 562
             ++A+   +  V +AL++MY+K G +E A  + +  R  +L  +++ S++ GY + G+ 
Sbjct: 300 YILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNV 359

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           K A E+F ++R +D+    + +  +I      GL ++  + F +MVNE    P     + 
Sbjct: 360 KPAREIFNKLRDRDV----VAWTAMIVGYVQNGLWNDALELFRLMVNEGP-EPNSYTLAA 414

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAAT 682
           M+ + S   +LE    I                  A  + + +    ++   L  MYA T
Sbjct: 415 MLSVSSSLTILEHGKQI-----------------HASAIKAGESSTPSVTNALIAMYAKT 457

Query: 683 GHWQERARVRKLMNDRK 699
           G+     RV  L N +K
Sbjct: 458 GNINVAKRVFDLPNGKK 474



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 170/372 (45%), Gaps = 40/372 (10%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTCG 89
           S F++ P R+ V +N ++  Y +   + EAL +F   + L  P       TL+S+L  C 
Sbjct: 229 SQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIF--SKMLNEPSLKPDNFTLASILSACA 286

Query: 90  CLFDHVFGRQVH-----CECVKSGFARDVNVS---------------------------- 116
            L     G+Q+H      E   SG   +  +S                            
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAF 346

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           TSL+D Y +  NV+  R +F+ + + +VV+WT+++ GY +N + +  LELF  M  EG +
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPE 406

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           PNS+T + +L V +   I+    Q+H   IK G     SV NALI+MY K+  +  A+ V
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRV 466

Query: 237 FDGMEDRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           FD    +  I +W SM+     + L  EA   F  M   G +    T+V V+  C     
Sbjct: 467 FDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGL 526

Query: 296 LRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +   R+ ++ + + + I+   +    ++  Y + G +++A      M    D ++W +++
Sbjct: 527 VEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLL 586

Query: 355 SGHLQNGAIDLA 366
           +    +   DLA
Sbjct: 587 ASCKIHKNADLA 598


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/700 (36%), Positives = 397/700 (56%), Gaps = 34/700 (4%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M  EG    S  +  +L    + G +  A  VH  + K G      V  +L++ Y++   
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            RDAR +FDGM +R+ +TW ++V GY  N       E F  M   G   +  T  + +  
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C  + ++ L +Q+H   +K G +   ++   L   Y+K G ++ A + F  + E K+V++
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE-KNVIT 247

Query: 350 WTAMISGHLQNG-AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           WT MIS   ++   ++L ++ F  M  +GV PN FT + +++            QV A  
Sbjct: 248 WTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 307

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG-- 462
            K   E +  V  + +  Y++KG  DEA ++FE +++  I+ W+AM++GYAQI D+    
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 367

Query: 463 ---------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
                    A+ I+R L    +KP+ FTFSS+++ C+A   A+EQG+Q HA +IK+   +
Sbjct: 368 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSA-MMALEQGEQIHAQTIKSGFLS 426

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V+SALV MY+K G I+ A++ F     R  V+W SMI GY+QHG  ++A+++F+EMR
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +  + ITF+ +++AC++AGLV+E + YFD+M  E+ I P ++HY CM+D++ R G +
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 546

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
           E A   I R  F  +  +W +++A CR              L+ L+P     Y+LL NMY
Sbjct: 547 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMY 606

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
            +T  WQ+ ARVRKLM    V      SWI +K+K Y F A D +HPQ+ ++Y  LE L 
Sbjct: 607 ISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLL 666

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAI--LSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
            + K  GY+P  +  L D +D+ K A   L  HSERLA+A GL+ TP GA +++ KN+ +
Sbjct: 667 EKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITM 726

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           C DCH+ IKL S LE R+I+VRD+ R H FK+G CSCGD+
Sbjct: 727 CRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 247/487 (50%), Gaps = 18/487 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R VH    K+G + D+ V+TSLV+ YMR +   D RR+FD M E NVV+WT+L++GY  
Sbjct: 97  ARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTL 156

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      LE+F  M   G  P+ +T    L        V    QVH   IK G E +TS+
Sbjct: 157 NSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSM 216

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME-AFETFNNMGLAG 275
            N+L S+Y K   +  A   F  + +++ ITW +M++    +E  +E     F +M + G
Sbjct: 217 GNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDG 276

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 T  SV+ LC T  +L L +Q+ +   K G + +  ++   M  Y + G+ ++A 
Sbjct: 277 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 336

Query: 336 KIFSMMREMKDVVSWTAMISGHLQ---NGAIDL--------AVNFFCQMTREGVRPNGFT 384
           ++F  M E   +++W AMISG+ Q   +   DL        A+  F  + R  ++P+ FT
Sbjct: 337 RLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFT 395

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +S IL+   A+       Q+HA  IK+ +     V +AL+N Y K G + +A K F  + 
Sbjct: 396 FSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 455

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            +  V W++M++GY+Q G  + A++++ ++   GV+PNE TF S+++AC+      E   
Sbjct: 456 TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEH 515

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
            F     +  +   +     ++ M+ + G +E A    KR   + +   W+S++ G   H
Sbjct: 516 YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSH 575

Query: 560 GHTKKAL 566
           G+ + A 
Sbjct: 576 GNMELAF 582



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 227/479 (47%), Gaps = 52/479 (10%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           ++  + LFD  P+RN V +  L+  Y  +S     L +F+ +  +G      TL + L  
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C    D   G+QVH   +K G     ++  SL  LY +  +++   R F  + E NV++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 148 TSLLSGYARNKMNDRV-LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           T+++S  A ++    + + LF  M ++G+ PN FT ++V+ +      +    QV     
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT------NEL 260
           K G E    V N+ + +YL+     +A  +F+ MED   ITWN+M++GY        ++L
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368

Query: 261 H-----MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                  +A   F ++  +  +    TF S++ +C+    L    Q+H+Q +K+G   D 
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV 428

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y+KCG ++DA+K F  M   +  V+WT+MISG+ Q+G    A+  F +M  
Sbjct: 429 VVNSALVNMYNKCGCIQDANKAFLEM-PTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL 487

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            GVRPN  T+                                +LL+A    G+++EA   
Sbjct: 488 AGVRPNEITF-------------------------------VSLLSACSYAGLVEEAEHY 516

Query: 436 FELIDEKDIVA-----WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           F+++ ++  +      +  M+  + ++G  E A    ++    G +PNE  +SS++  C
Sbjct: 517 FDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAGC 572



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 132/263 (50%), Gaps = 20/263 (7%)

Query: 11  INPQTKQPPKSLRSPFYSKKDQS-----LFDRSPQRNFVEYNRLLFEYC------RDSLH 59
           I  +T  P K+     Y +K ++     LF++    + + +N ++  Y       +D L 
Sbjct: 310 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 369

Query: 60  Q-----EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
                 +AL +F  ++R  +     T SS+L  C  +     G Q+H + +KSGF  DV 
Sbjct: 370 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 429

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
           V+++LV++Y +   ++D  + F +M     V+WTS++SGY+++      ++LF  M++ G
Sbjct: 430 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 489

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDA 233
           ++PN  TF ++L   +  G+V  A     M+ K    E V      +I M+++   V DA
Sbjct: 490 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 549

Query: 234 RAVFD--GMEDRDSITWNSMVAG 254
            +     G E  ++I W+S+VAG
Sbjct: 550 FSFIKRTGFEPNEAI-WSSLVAG 571


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/727 (36%), Positives = 393/727 (54%), Gaps = 90/727 (12%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q H  ++K G    T +   L+S Y  +    DA  V D + + +  ++++++  +    
Sbjct: 34  QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
               A  TF+ M   G         S +K CA    L+ ARQ+H     +G D D  +++
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC ++ DA ++F  M E  DVVSW+A+++ + + G +D A   F +M   GV+
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFE-PDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQ 212

Query: 380 PN---------GFTYS-----------------------IILTAQPAVSPFQ-------V 400
           PN         GF +S                        I +  PAV   +       +
Sbjct: 213 PNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILI 272

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI---------------- 444
           H ++IK        V +AL++ Y K     E ++VF+ +D  D+                
Sbjct: 273 HGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQV 332

Query: 445 -------------------VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
                              V+W++M+A  +Q G    A++++R++   GVKPN  T   +
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCL 392

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + AC    AA+  GK  H  S++  ++  + V SAL+ MY+K G I+++   F     ++
Sbjct: 393 LPAC-GNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKN 451

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           LV WN++I GYA HG  K+A+E+F  M+R   + D I+F  V++AC+ +GL +EG  YF+
Sbjct: 452 LVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFN 511

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----- 660
            M +++ I   +EHY+CMV L SRAG LE+A  +I RMP    A VW  +L++CR     
Sbjct: 512 SMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNV 571

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    L  L+P +   Y+LLSN+YA+ G W E  RVR +M ++ ++K  G SWIEV
Sbjct: 572 SLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEV 631

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           KNK +  LAGD SHPQ  QI  KL++LS  +K  GY P+ ++VLQD++++ KE IL  HS
Sbjct: 632 KNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHS 691

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+LA+ FGL+ TP G PLQ++KNLR+CGDCH VIK IS  ERR+I VRDTNRFHHFKEG 
Sbjct: 692 EKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGA 751

Query: 832 CSCGDYW 838
           CSCGDYW
Sbjct: 752 CSCGDYW 758



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 144/571 (25%), Positives = 249/571 (43%), Gaps = 84/571 (14%)

Query: 57  SLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVS 116
           SL  +AL L   ++        ST +S+ +T          RQ H   +K+G   D +++
Sbjct: 2   SLSAQALALLDSVQHTIFNCLNSTTASLSQT----------RQAHAHILKTGLFNDTHLA 51

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           T L+  Y       D   V D + E NV S+++L+  +++       L  F +M   G+ 
Sbjct: 52  TKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLM 111

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P++    + +   A    +  A QVH +   +G +  + V ++L+ MY+K   +RDA  V
Sbjct: 112 PDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRV 171

Query: 237 FDGMEDRDS-----------------------------------ITWNSMVAGYVTNELH 261
           FD M + D                                    I+WN M+AG+  + L+
Sbjct: 172 FDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLY 231

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            EA   F +M L G E   +T  SV+      ++L +   +H  V+K G+  D  + + L
Sbjct: 232 SEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSAL 291

Query: 322 MVAYSKCGKMEDASKIFSMM----------------------------REMKD------V 347
           +  Y KC    + S++F  M                            R++KD      V
Sbjct: 292 IDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNV 351

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAH 403
           VSWT+MI+   QNG    A+  F +M   GV+PN  T   +L A   ++        H  
Sbjct: 352 VSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCF 411

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
            ++        VG+AL++ Y K G +  +   F+ I  K++V W+A++AGYA  G  + A
Sbjct: 412 SLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEA 471

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           ++I+  +   G KP+  +F+ V++AC+      E    F++ S K  +   +   + +VT
Sbjct: 472 MEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVT 531

Query: 524 MYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           + S+ G +E A  + +R     D   W +++
Sbjct: 532 LLSRAGKLEQAYAMIRRMPVNPDACVWGALL 562



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 178/428 (41%), Gaps = 71/428 (16%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           + D  P+ N   ++ L++ + +      AL+ F  +   GL      L S +K C  L  
Sbjct: 70  VLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSA 129

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
               RQVH     SGF  D  V +SLV +Y++ N + D  RVFD M E +VVSW++L++ 
Sbjct: 130 LKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAA 189

Query: 154 YARNKMNDRVLELFHRMQVEGIKPN----------------------------------- 178
           YAR    D    LF  M   G++PN                                   
Sbjct: 190 YARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD 249

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
             T S+VL  + D   +   + +H  VIK G      V +ALI MY K     +   VFD
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309

Query: 239 GMEDRD-----------------------------------SITWNSMVAGYVTNELHME 263
            M+  D                                    ++W SM+A    N   +E
Sbjct: 310 QMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIE 369

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A E F  M +AG +    T   ++  C     L   +  H   L+ GI  D  + + L+ 
Sbjct: 370 ALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALID 429

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y+KCG+++ AS+I       K++V W A+I+G+  +G    A+  F  M R G +P+  
Sbjct: 430 MYAKCGRIQ-ASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDII 488

Query: 384 TYSIILTA 391
           +++ +L+A
Sbjct: 489 SFTCVLSA 496



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 36/356 (10%)

Query: 36  DRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV 95
           D   Q N + +N ++  +    L+ EA+ +FL +   G    G+T+SSVL   G L D V
Sbjct: 208 DSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLV 267

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN--------------- 140
            G  +H   +K G   D  VS++L+D+Y + +   +  +VFD M+               
Sbjct: 268 MGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLS 327

Query: 141 --------------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
                               E NVVSWTS+++  ++N  +   LELF  MQ+ G+KPNS 
Sbjct: 328 RNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSV 387

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           T   +L    +   +      H   ++ G      V +ALI MY K   ++ +R  FDG+
Sbjct: 388 TIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGI 447

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             ++ + WN+++AGY  +    EA E F+ M  +G +    +F  V+  C+ +       
Sbjct: 448 PTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGS 507

Query: 301 -QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
              +S   K GI+        ++   S+ GK+E A  +   M    D   W A++S
Sbjct: 508 YYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 39/357 (10%)

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           L +TT  L   RQ H+ +LK G+  D ++ T L+  Y+      DA+ +  ++ E  +V 
Sbjct: 22  LNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE-PNVF 80

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           S++ +I    +      A++ F QM   G+ P+       + A   +S      QVH   
Sbjct: 81  SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
             + ++    V ++L++ Y+K   + +A +VF+ + E D+V+WSA++A YA+ G  + A 
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200

Query: 465 KIYRQLTSEGVKPNEFTFSSVI---NACTAPSAAV------------------------- 496
           +++ ++   GV+PN  +++ +I   N     S AV                         
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260

Query: 497 ------EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
                   G   H   IK  L +  CVSSAL+ MY K       S+VF +    D+ S N
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           + I G +++G  + +L +F++++ Q +E + +++  +I  C+  G   E  + F  M
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM 377



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 110/224 (49%), Gaps = 2/224 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + L D+  + N V +  ++    ++    EAL LF  ++  G+     T+  +L  CG +
Sbjct: 340 RQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNI 399

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              + G+  HC  ++ G + DV V ++L+D+Y +   ++  R  FD +   N+V W +++
Sbjct: 400 AALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVI 459

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT-AVQVHTMVIKNGG 210
           +GYA +      +E+F  MQ  G KP+  +F+ VL   +  G+    +   ++M  K G 
Sbjct: 460 AGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGI 519

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           E        ++++  ++  +  A A+   M  + D+  W ++++
Sbjct: 520 EARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/770 (35%), Positives = 417/770 (54%), Gaps = 73/770 (9%)

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           + S V  W +L+    +  + D  L  + +MQ  G  P+ +TF  VL    +   +    
Sbjct: 88  SHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGA 147

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR---DSITWNSMVAGYV 256
            VH +V  NG      +CN++++MY +   + DA  +FD + +R   D ++WNS++A YV
Sbjct: 148 SVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYV 207

Query: 257 TNELHMEAFETFNNMGLAGAELTRS---TFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
                  A      MG   +   R    T V+++  CA+   L+  +Q+H   ++NG+  
Sbjct: 208 QGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVD 267

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  +   L+  Y+KC KM +A+K+F  +++ KDVVSW AM++G+ Q G+ D A++ F  M
Sbjct: 268 DVFVGNALVSMYAKCSKMNEANKVFEGIKK-KDVVSWNAMVTGYSQIGSFDSALSLFKMM 326

Query: 374 TRE-----------------------------------GVRPNGFTYSIILTAQPAVSPF 398
             E                                   G+ PN  T + +L+   +V   
Sbjct: 327 QEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGAL 386

Query: 399 ----QVHAHIIKT-------NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD--IV 445
               Q HA++IK        + E    V   L++ Y K      A  +F+ I+ KD  +V
Sbjct: 387 LYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVV 446

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            W+ M+ GYAQ G+   A+K++ Q+  +   +KPN FT S  + AC A    +  G+Q H
Sbjct: 447 TWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC-ARLGELRLGRQLH 505

Query: 504 ACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           A +++ +  +  L V + L+ MYSK G+I++A  VF   + R++VSW S++ GY  HG  
Sbjct: 506 AYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRG 565

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           ++AL +F +M++     DGITF+ V+ AC+H+G+VD+G  YF  MV    I P  EHY+C
Sbjct: 566 EEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYAC 625

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           MVDL  RAG L +AM++I  M    +A VW  +L+A R              L  L   +
Sbjct: 626 MVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAEN 685

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
              Y LLSN+YA    W++ AR+R LM    ++K  G SWI+ K  T +F  GD SHP+S
Sbjct: 686 DGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPES 745

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            QIY+ L +L  R+KD GY P TS+ L D+DDE K  +L +HSE+LA+A+G++ T  G P
Sbjct: 746 EQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQP 805

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++I KNLR+CGDCH+ +  IS +   +IV+RD++RFHHFK+G CSC  YW
Sbjct: 806 IRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 254/551 (46%), Gaps = 58/551 (10%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           +N L+    +  L  + L  +  ++RLG      T   VLK CG +     G  VH    
Sbjct: 95  WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE---SNVVSWTSLLSGYARNKMNDR 162
            +G   +V +  S+V +Y R   ++D  ++FD++ E    ++VSW S+L+ Y +   +  
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214

Query: 163 VLELFHRMQVE---GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
            L +  RM       ++P++ T   +L   A    +    QVH   ++NG      V NA
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMV--------------------------- 252
           L+SMY K   + +A  VF+G++ +D ++WN+MV                           
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334

Query: 253 --------AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
                   AGY       EA + F  M L G E    T  S++  CA+   L   +Q H+
Sbjct: 335 VITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHA 394

Query: 305 QVLKNGIDFDHN-------IRTGLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMISG 356
            V+KN ++ + N       +  GL+  Y+KC     A  IF S+  + K+VV+WT MI G
Sbjct: 395 YVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGG 454

Query: 357 HLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT-NY 409
           + Q+G  + A+  F Q+ ++   ++PN FT S  L A   +       Q+HA+ ++  N 
Sbjct: 455 YAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENE 514

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
            +   VG  L++ Y K G +D A  VF+ +  +++V+W++++ GY   G  E A+ ++ Q
Sbjct: 515 SEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQ 574

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGK-QFHACSIKAKLNNALCVSSALVTMYSKK 528
           +   G   +  TF  V+ AC+  S  V+QG   FH       +       + +V +  + 
Sbjct: 575 MQKLGFAVDGITFLVVLYACS-HSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRA 633

Query: 529 GNIESASEVFK 539
           G +  A E+ K
Sbjct: 634 GRLNEAMELIK 644



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 232/508 (45%), Gaps = 71/508 (13%)

Query: 32  QSLFDRSPQR---NFVEYNRLLFEYCRDSLHQEALNLFLGIRR---LGLPLFGSTLSSVL 85
             +FD   +R   + V +N +L  Y +    + AL +   +     L L     TL ++L
Sbjct: 182 HQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNIL 241

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C  +F    G+QVH   V++G   DV V  +LV +Y + + + +  +VF+ + + +VV
Sbjct: 242 PACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVV 301

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVE-------------------------------- 173
           SW ++++GY++    D  L LF  MQ E                                
Sbjct: 302 SWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM 361

Query: 174 ---GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK-------NGGEVVTSVCNALISM 223
              G++PN  T +++L   A  G +    Q H  VIK       N  E    V N LI M
Sbjct: 362 QLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDM 421

Query: 224 YLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           Y K K  R AR++FD +E  D++ +TW  M+ GY  +    +A + F  +      L  +
Sbjct: 422 YAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPN 481

Query: 282 TFVSVIKL--CATTKELRLARQLHSQVLKNGIDFD-HNIRTGLMVAYSKCGKMEDASKIF 338
            F     L  CA   ELRL RQLH+  L+N  + +   +   L+  YSK G ++ A  +F
Sbjct: 482 AFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVF 541

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAV 395
             M+ +++VVSWT++++G+  +G  + A++ F QM + G   +G T+ ++L A      V
Sbjct: 542 DNMK-LRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMV 600

Query: 396 SPFQVHAHIIKTNYEKSFSVGTA------LLNAYVKKGILDEAAKVFELID-EKDIVAWS 448
               ++ H    +  K F +         +++   + G L+EA ++ + +  E   V W 
Sbjct: 601 DQGMIYFH----DMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWV 656

Query: 449 AMLAG---YAQIGDTEGAVKIYRQLTSE 473
           A+L+    +A I   E A     +L +E
Sbjct: 657 ALLSASRIHANIELGEYAASKLTELGAE 684



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 175/324 (54%), Gaps = 18/324 (5%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS-MM 341
            +S+++ C T    +LA   H Q+  +G     +   G   AY +CG   +A  +   ++
Sbjct: 33  LISLLRQCKTLINAKLA---HQQIFVHGFTEMFSYAVG---AYIECGASAEAVSLLQRLI 86

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-- 399
                V  W A+I   ++ G +D  + F+CQM R G  P+ +T+  +L A   +   +  
Sbjct: 87  PSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHG 146

Query: 400 --VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK---DIVAWSAMLAGY 454
             VHA +       +  +  +++  Y + G LD+A ++F+ + E+   DIV+W+++LA Y
Sbjct: 147 ASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAY 206

Query: 455 AQIGDTEGAVKIYRQLT---SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            Q G +  A++I  ++    S  ++P+  T  +++ AC A   A++ GKQ H  S++  L
Sbjct: 207 VQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPAC-ASVFALQHGKQVHGFSVRNGL 265

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            + + V +ALV+MY+K   +  A++VF+  +K+D+VSWN+M+ GY+Q G    AL +FK 
Sbjct: 266 VDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKM 325

Query: 572 MRRQDLEFDGITFIGVITACTHAG 595
           M+ +D++ D IT+  VI      G
Sbjct: 326 MQEEDIKLDVITWSAVIAGYAQKG 349


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/747 (36%), Positives = 410/747 (54%), Gaps = 80/747 (10%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M   G + + FT   VL    +          H ++  NG E    +CNAL++MY +   
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 230 VRDARAVFDGMEDR---DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT---RSTF 283
           + +A  +FD +  R   D I+WNS+V+ +V +     A + F+ M L   E     RS  
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 284 VSVIKL---CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           +S++ +   C + K +   +++H   ++NG   D  +   L+ AY+KCG ME+A K+F+M
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 341 MREMKDVVSWTAMISGHLQNG----AIDL------------------------------- 365
           M E KDVVSW AM++G+ Q+G    A +L                               
Sbjct: 181 M-EFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT----------NYEK 411
           A+N F QM   G  PN  T   +L+A  ++  F    ++HA+ +K             ++
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
              V  AL++ Y K      A  +F+ I  +E+++V W+ M+ G+AQ GD+  A+K++ +
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359

Query: 470 LTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL--NNALCVSSALVTMY 525
           + SE  GV PN +T S ++ AC A  AA+  GKQ HA  ++     ++A  V++ L+ MY
Sbjct: 360 MISEPYGVAPNAYTISCILMAC-AHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 418

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           SK G++++A  VF    ++  +SW SM+ GY  HG   +AL++F +MR+     D ITF+
Sbjct: 419 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 478

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
            V+ AC+H G+VD+G  YFD M  ++ + P  EHY+  +DL +R G L+KA   +  MP 
Sbjct: 479 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPM 538

Query: 646 AASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARV 691
             +A VW  +L+ACR              L+ +   +   Y L+SN+YA  G W++ AR+
Sbjct: 539 EPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 598

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           R LM    +KK  G SW++ +  T SF  GD SHP S QIY+ LE L  R+K  GY P+T
Sbjct: 599 RHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPET 658

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           ++ L D+D+E K  +L +HSE+LA+A+GL+ T  G P++I KNLRVCGDCH+    ISK+
Sbjct: 659 NFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKI 718

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              +IVVRD +RFHHFK G CSCG YW
Sbjct: 719 VDHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 262/576 (45%), Gaps = 66/576 (11%)

Query: 71  RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE 130
           R G  L   TL  VLK CG L  +  G   H     +GF  +V +  +LV +Y R  ++E
Sbjct: 3   RAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLE 62

Query: 131 DGRRVFDDMNE---SNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNS-----FT 181
           +   +FD++ +    +V+SW S++S + ++      L+LF +M  +   KP +      +
Sbjct: 63  EASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 122

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
              +L        V    +VH   I+NG  +   V NALI  Y K  ++ +A  VF+ ME
Sbjct: 123 IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 182

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMG----------------------------- 272
            +D ++WN+MVAGY  +     AFE F NM                              
Sbjct: 183 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 242

Query: 273 ------LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN----------GIDFDHN 316
                  +G+     T +SV+  CA+        ++H+  LKN          G D D  
Sbjct: 243 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 302

Query: 317 IRTGLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
           +   L+  YSKC   + A  IF  +  E ++VV+WT MI GH Q G  + A+  F +M  
Sbjct: 303 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 362

Query: 376 E--GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN-YEKS-FSVGTALLNAYVKKG 427
           E  GV PN +T S IL A   ++      Q+HA++++ + Y+ S + V   L+N Y K G
Sbjct: 363 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCG 422

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +D A  VF+ + +K  ++W++M+ GY   G    A+ I+ ++   G  P++ TF  V+ 
Sbjct: 423 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 482

Query: 488 ACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRD 545
           AC+     V+QG   F + S    L       +  + + ++ G ++ A +  K    +  
Sbjct: 483 ACSH-CGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPT 541

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
            V W +++     H + + A     ++   + E DG
Sbjct: 542 AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDG 577



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 222/493 (45%), Gaps = 81/493 (16%)

Query: 34  LFDRSPQR---NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---------TL 81
           +FD   QR   + + +N ++  + + S    AL+LF    ++ L +            ++
Sbjct: 67  IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLF---SKMTLIVHEKPTNERSDIISI 123

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
            ++L  CG L      ++VH   +++G   DV V  +L+D Y +   +E+  +VF+ M  
Sbjct: 124 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 183

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK------------------------- 176
            +VVSW ++++GY+++       ELF  M+ E I                          
Sbjct: 184 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 243

Query: 177 ----------PNSFTFSTVLGVLADEGIVATAVQVHTMVIKN---------GGEVVT-SV 216
                     PN  T  +VL   A  G  +  +++H   +KN         GGE     V
Sbjct: 244 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMV 303

Query: 217 CNALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNM--G 272
            NALI MY K +  + AR++FD   +E+R+ +TW  M+ G+       +A + F  M   
Sbjct: 304 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 363

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN---IRTGLMVAYSKCG 329
             G      T   ++  CA    +R+ +Q+H+ VL++   +D +   +   L+  YSKCG
Sbjct: 364 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH-QYDSSAYFVANCLINMYSKCG 422

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++ A  +F  M + K  +SWT+M++G+  +G    A++ F +M + G  P+  T+ ++L
Sbjct: 423 DVDTARHVFDSMSQ-KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 481

Query: 390 TA-------QPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK-VFELID 440
            A          +S F  + A    T   + ++    LL  +   G LD+A K V ++  
Sbjct: 482 YACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARF---GRLDKAWKTVKDMPM 538

Query: 441 EKDIVAWSAMLAG 453
           E   V W A+L+ 
Sbjct: 539 EPTAVVWVALLSA 551



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 173/375 (46%), Gaps = 40/375 (10%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +  ++  Y +     EALN+F  +   G      T+ SVL  C  L     G ++H
Sbjct: 220 DMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIH 279

Query: 102 CECVKS----------GFARDVNVSTSLVDLYMRTNNVEDGRRVFDD--MNESNVVSWTS 149
              +K+          G   D+ V  +L+D+Y +  + +  R +FDD  + E NVV+WT 
Sbjct: 280 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 339

Query: 150 LLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           ++ G+A+   ++  L+LF  M  E  G+ PN++T S +L   A    +    Q+H  V++
Sbjct: 340 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 399

Query: 208 NGGEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +     ++  V N LI+MY K   V  AR VFD M  + +I+W SM+ GY  +    EA 
Sbjct: 400 HHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 459

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT--GLM- 322
           + F+ M  AG      TF+ V+  C+           H  ++  G+ +  ++    GL  
Sbjct: 460 DIFDKMRKAGFVPDDITFLVVLYACS-----------HCGMVDQGLSYFDSMSADYGLTP 508

Query: 323 ----VAY-----SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
                AY     ++ G+++ A K    M      V W A++S    +  ++LA +   ++
Sbjct: 509 RAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKL 568

Query: 374 TREGVRPNGFTYSII 388
                  +G +Y++I
Sbjct: 569 VEMNAENDG-SYTLI 582



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 6/173 (3%)

Query: 29  KKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGI--RRLGLPLFGSTLSSV 84
           K  +S+FD  P  +RN V +  ++  + +     +AL LF+ +     G+     T+S +
Sbjct: 318 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 377

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGF--ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           L  C  L     G+Q+H   ++     +    V+  L+++Y +  +V+  R VFD M++ 
Sbjct: 378 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 437

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           + +SWTS+++GY  +      L++F +M+  G  P+  TF  VL   +  G+V
Sbjct: 438 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 490


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/744 (33%), Positives = 418/744 (56%), Gaps = 20/744 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD  P+R+ V +N +L  Y ++  H++++ +F  +R L +    +T + VLK C  +
Sbjct: 124 QFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGI 183

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D+  G QVHC  ++ GF  DV   T+LVD+Y     ++    +F +M E N V W++++
Sbjct: 184 EDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVI 243

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY RN      L+L+  M  EG+  +  TF++     A         Q+H   +K    
Sbjct: 244 AGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFG 303

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  A + MY K   + DAR VF+   +    + N+++ GY   +  +EA E F ++
Sbjct: 304 YDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSL 363

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +  +    +    +  C+  K      QLH   +K G+DF+  +   ++  Y+KCG +
Sbjct: 364 QKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGAL 423

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A  IF  M E+KD VSW A+I+ H QN  ++  +  F  M R  + P+ +T+  ++ A
Sbjct: 424 MEACLIFDDM-EIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKA 482

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
                      +VH  +IK+     + VG+A+++ Y K G+L EA K+ E ++E+  V+W
Sbjct: 483 CAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSW 542

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +++++G++     E A+  + ++   GV P+ FT+++V++ C A  A VE GKQ H   +
Sbjct: 543 NSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDIC-ANLATVELGKQIHGQIL 601

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K +L++ + ++S +V MYSK GN++ +  +F++  KRD V+W++MIC YA HG  + A++
Sbjct: 602 KLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIK 661

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F+EM+ Q+++ +   FI V+ AC H G VD+G  YF  M + + + P MEHYSCMVDL 
Sbjct: 662 LFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLL 721

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            R+G + +A+++I  MPF A   +WRT+L  CR              L+ L P DS+ YV
Sbjct: 722 GRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYV 781

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LLSN+YA  G W E A++R  M + K+KKE G SWI+V+++ ++FL GD +HP+S +IY 
Sbjct: 782 LLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQ 841

Query: 734 KLEELSTRLKDAGYKPDTSYVLQD 757
           +   L   +K  GY P+    L D
Sbjct: 842 QTHLLVDEMKWDGYVPEIDGFLLD 865



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/573 (27%), Positives = 287/573 (50%), Gaps = 17/573 (2%)

Query: 99  QVHCECVKSGFA---------RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           Q +C+C+   +A         RDV    +++  Y    N+E  + +FD M E +VVSW S
Sbjct: 81  QFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNS 140

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +LS Y +N  + + +E+F +M++  I+ +  TF+ VL            +QVH + I+ G
Sbjct: 141 MLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG 200

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +       AL+ MY   K +  A  +F  M +R+S+ W++++AGYV N+   E  + + 
Sbjct: 201 FDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYK 260

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G  ++++TF S  + CA      L  QLH+  LK    +D+ + T  +  Y+KC 
Sbjct: 261 VMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCD 320

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +M DA K+F+         S  A+I G+ +   +  A+  F  + +  +  +  + S  L
Sbjct: 321 RMVDARKVFNTFPN-PTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGAL 379

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           TA  A+  +    Q+H   +K   + +  V   +L+ Y K G L EA  +F+ ++ KD V
Sbjct: 380 TACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAV 439

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+A++A + Q    E  + ++  +    ++P+++TF SV+ AC A   A+  G + H  
Sbjct: 440 SWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKAC-AGKKALNYGMEVHGR 498

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            IK+ +     V SA++ MY K G +  A ++ +R  +R  VSWNS+I G++     + A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L  F  M +  +  D  T+  V+  C +   V+ G+Q    ++ +  ++  +   S +VD
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQIL-KLQLHSDVYIASTIVD 617

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +YS+ G ++ +  +  + P     T W  ++ A
Sbjct: 618 MYSKCGNMQDSRIMFEKAPKRDYVT-WSAMICA 649



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/529 (26%), Positives = 244/529 (46%), Gaps = 44/529 (8%)

Query: 168 HRMQVEGIKPNS-FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           H +    + P    TFS +    ++   +    Q H  +   G      V N L+  Y K
Sbjct: 26  HSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCK 85

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAG-------------------------------Y 255
              +  A  VFD M  RD I+WN+M+ G                               Y
Sbjct: 86  CLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCY 145

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           + N  H ++ E F  M L   +   +TF  V+K C   ++  L  Q+H   ++ G D D 
Sbjct: 146 LQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDV 205

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
              T L+  YS C K++ A  IF  M E ++ V W+A+I+G+++N      +  +  M  
Sbjct: 206 VTGTALVDMYSTCKKLDHAFNIFCEMPE-RNSVCWSAVIAGYVRNDRFTEGLKLYKVMLD 264

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           EG+  +  T++    +   +S F    Q+HA+ +KTN+     VGTA L+ Y K   + +
Sbjct: 265 EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVD 324

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A KVF         + +A++ GYA+      A++I+R L    +  +E + S  + AC+A
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
               +E G Q H  ++K  L+  +CV++ ++ MY+K G +  A  +F     +D VSWN+
Sbjct: 385 IKGYLE-GIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNA 443

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +I  + Q+ H ++ L +F  M R  +E D  TF  V+ AC     ++ G +    ++   
Sbjct: 444 IIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSG 503

Query: 612 HIYPTMEHY--SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                ++ +  S ++D+Y + GML +A  I  R+    + + W ++++ 
Sbjct: 504 M---GLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVS-WNSIISG 548


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 274/828 (33%), Positives = 429/828 (51%), Gaps = 91/828 (10%)

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L D    +++H    KSGF  +  + + L+D+Y+    V++  ++FDD+  SNV  W 
Sbjct: 24  GSLLD---AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWN 80

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAVQVHTMVIK 207
            ++SG    K+  +VL LF  M  E + P+  TF++VL      +       Q+H  +I 
Sbjct: 81  KVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIH 140

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +G      VCN LI +Y K+  V  A+ VF+ +  +DS++W +M++G   N    EA   
Sbjct: 141 HGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILL 200

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  M  +    T   F SV+  C   +  +L  QLH  ++K G+  +  +   L+  YS+
Sbjct: 201 FCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSR 260

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G +  A +IFS M   +D +S+ ++ISG  Q G  D A+  F +M  + ++P+  T + 
Sbjct: 261 WGNLIAAEQIFSKMHR-RDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+A  +V       Q+H+++IK        +  +LL+ YVK   ++ A + F   + ++
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V W+ ML  Y Q+G+   +  I+ Q+  EG+ PN++T+ S++  CT+   A++ G+Q H
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSL-GALDLGEQIH 438

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
              IK+     + V S L+ MY+K G +++A  + +R R+ D+VSW +MI GY QH    
Sbjct: 439 TQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA 498

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS-- 621
           +AL++F+EM  Q +  D I F   I+AC     +++GQQ         H    +  YS  
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQI--------HAQSYISGYSED 550

Query: 622 ----------CMVDLYSRAGMLEKA----------------------------------- 636
                      ++ LYS+ G +E A                                   
Sbjct: 551 LSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLF 610

Query: 637 ------------MDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSA 670
                       +  +  MP    A +WRT+L+AC               L+ L+P DSA
Sbjct: 611 EEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSA 670

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YVLLSNMYA +G W  R R R++M DR VKKE G SWIEVKN  ++F  GD  HP + Q
Sbjct: 671 TYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQ 730

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           IY  +++L+ R  + GY  D   +L D++ E K+     HSE+LA+AFGL++     P++
Sbjct: 731 IYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIR 790

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++KNLRVC DCH  IK +SK+  R IVVRD  RFHHF+ G+CSC DYW
Sbjct: 791 VIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 252/481 (52%), Gaps = 12/481 (2%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M+  GI+ N  T+  +     + G +  A ++H  + K+G +    + + LI +YL    
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           V +A  +FD +   +   WN +++G +  +L  +    F+ M         STF SV++ 
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 290 CATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           C+  K   ++  Q+H++++ +G      +   L+  YSK G ++ A  +F  +  +KD V
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF-LKDSV 179

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           SW AMISG  QNG  D A+  FCQM +  V P  + +S +L+A   +  F    Q+H  I
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K        V  AL+  Y + G L  A ++F  +  +D ++++++++G AQ G ++ A+
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           +++ ++  + +KP+  T +S+++AC +  A   +GKQ H+  IK  +++ L +  +L+ +
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGY-KGKQLHSYVIKMGMSSDLIIEGSLLDL 358

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K  +IE+A E F      ++V WN M+  Y Q G+  ++  +F +M+ + L  +  T+
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC--MVDLYSRAGMLEKAMDIINR 642
             ++  CT  G +D G+Q    ++     +     Y C  ++D+Y++ G L+ A  I+ R
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNV---YVCSVLIDMYAKHGELDTARGILQR 475

Query: 643 M 643
           +
Sbjct: 476 L 476



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 5/178 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +  R  + + V +  ++  Y +  L  EAL LF  +   G+       SS +  C  +
Sbjct: 470 RGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGI 529

Query: 92  FDHVFGRQVHCECVKSGFARDVNV-----STSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
                G+Q+H +   SG++ D+++     S  L+ LY +  ++ED +R F +M E NVVS
Sbjct: 530 QALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVS 589

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           W ++++GY+++      + LF  M+  G+ PN  TF   + +  D  I  T +   T+
Sbjct: 590 WNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTV 647


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/648 (38%), Positives = 381/648 (58%), Gaps = 32/648 (4%)

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           S+ N L+ MY       D + VFD M  ++ ++W  +++ Y  N    +A   F++M  +
Sbjct: 123 SIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS 182

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G     + ++S+++ C     L L +Q+HS V++  ++ +  + T +   Y +CG +E A
Sbjct: 183 GIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGA 242

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             +F  M + ++ V+WT ++ G+ Q   +++A+  F +M  EGV  + F +SI+L     
Sbjct: 243 KLVFDGM-DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCG 301

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +  +    Q+H+HI+K   E   SVGT L++ YVK G ++ A + F  I E + V+WSA+
Sbjct: 302 LEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           ++G++Q G  E  +KI+  L SEGV  N F ++SV  AC A  A +  G Q H  +IK  
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAA-QANLNMGSQAHGDAIKRG 420

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L + L   SA+VTMYSK G ++ A   F+   + D V+W ++I GYA HG+  +AL  F+
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M+   +  + +TFI V+TAC+H+GLV E +QY   M  ++ + PT++HY CM+D YSRA
Sbjct: 481 RMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRA 540

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLS 676
           G+L++A+++INRMPF   A  W+++L  C               L  L P D+A Y+LL 
Sbjct: 541 GLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLF 600

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N+Y+A G W+E   VRKLM +R++KKE   SWI VK + + F+ GD  HPQ+  IYSKLE
Sbjct: 601 NLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLE 660

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDD------EHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           E    + D+  +     +L + DD        KE +L  HSE+LAIAFGL++T   AP+ 
Sbjct: 661 EFKCSVIDSPVR-----LLNEEDDVSCSLSARKEQLL-DHSEKLAIAFGLISTEDNAPIL 714

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + KNLR C DCH   K +S +  R IVVRD+ RFHHFK G CSC DYW
Sbjct: 715 VFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/490 (30%), Positives = 254/490 (51%), Gaps = 16/490 (3%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           + + CG L     GR +H    ++      ++   L+ +Y    +  D ++VFD+M   N
Sbjct: 93  LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKN 152

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +VSW  ++S YA+N   ++ + LF  MQ  GI+PNS  + ++L        +    Q+H+
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHS 212

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            VI+       +V  A+ +MY++   +  A+ VFDGM+ ++++TW  ++ GY   +    
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A E F  M + G EL    F  V+K+C   ++  + RQ+HS ++K G + + ++ T L+ 
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVD 332

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y KCG +E A + F  + E  D VSW+A+ISG  Q+G ++  +  F  +  EGV  N F
Sbjct: 333 FYVKCGDIESAYRSFGRISEPND-VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSF 391

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
            Y+ +  A  A +      Q H   IK          +A++  Y K G LD A + FE I
Sbjct: 392 IYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESI 451

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           DE D VAW+A+++GYA  G+   A+  +R++ S GV+PN  TF +V+ AC+  S  V + 
Sbjct: 452 DEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACS-HSGLVAEA 510

Query: 500 KQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           KQ+         +K  +++  C    ++  YS+ G ++ A E+  R   + D +SW S++
Sbjct: 511 KQYLGSMSRDYGVKPTIDHYDC----MIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566

Query: 554 CGYAQHGHTK 563
            G   H   K
Sbjct: 567 GGCWAHCDLK 576



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 198/402 (49%), Gaps = 12/402 (2%)

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EA +    M  A   +T  ++  + + C   + L   R +H ++ +   +   +I   L+
Sbjct: 70  EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL 129

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y  CG   D  K+F  M  MK++VSW  +IS + +NG ++ A+  F  M   G+RPN 
Sbjct: 130 RMYCDCGSCIDVQKVFDEML-MKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNS 188

Query: 383 FTYSIILTAQPAVSPF------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             Y  +L  Q  + P       Q+H+H+I+     + +V TA+ N YV+ G L+ A  VF
Sbjct: 189 AVYMSLL--QSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVF 246

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           + +D ++ V W+ ++ GY Q    E A++++ ++  EGV+ +EF FS V+  C       
Sbjct: 247 DGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDW- 305

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           + G+Q H+  +K    + + V + LV  Y K G+IESA   F R  + + VSW+++I G+
Sbjct: 306 DMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           +Q G  +  +++F  +R + +  +   +  V  AC     ++ G Q     + +  +   
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAI-KRGLVSY 424

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +   S MV +YS+ G L+ A      +     A  W  +++ 
Sbjct: 425 LYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISG 465



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 165/324 (50%), Gaps = 1/324 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD    +N V +  L+  Y +    + AL LF  +   G+ L     S VLK C  L D
Sbjct: 245 VFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLED 304

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GRQ+H   VK G   +V+V T LVD Y++  ++E   R F  ++E N VSW++L+SG
Sbjct: 305 WDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISG 364

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           ++++   +  +++F  ++ EG+  NSF +++V    A +  +    Q H   IK G    
Sbjct: 365 FSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY 424

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
               +A+++MY K   +  AR  F+ +++ D++ W ++++GY  +    EA   F  M  
Sbjct: 425 LYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQS 484

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            G      TF++V+  C+ +  +  A+Q L S     G+    +    ++  YS+ G ++
Sbjct: 485 YGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQ 544

Query: 333 DASKIFSMMREMKDVVSWTAMISG 356
           +A ++ + M    D +SW +++ G
Sbjct: 545 EALELINRMPFEPDAMSWKSLLGG 568



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 95/209 (45%), Gaps = 5/209 (2%)

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           L   ++ G  + A    +++    V     ++  +  AC     ++  G+  H    +  
Sbjct: 59  LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEAC-GKLRSLADGRLIHDRLRRTV 117

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            N +  + + L+ MY   G+     +VF     ++LVSW  +I  YA++G  +KA+ +F 
Sbjct: 118 KNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFS 177

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           +M+   +  +   ++ ++ +C     ++ G+Q +  ++  + +   T+E   C  ++Y R
Sbjct: 178 DMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAIC--NMYVR 235

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G LE A  + + M  A +A  W  ++  
Sbjct: 236 CGWLEGAKLVFDGMD-AQNAVTWTGLMVG 263


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 278/779 (35%), Positives = 438/779 (56%), Gaps = 49/779 (6%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R VH +   S   RD+ V+T+L+D Y +   VE    VF  +   +++ W + +   A 
Sbjct: 154 ARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAG 213

Query: 157 N-KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--GEVV 213
           N +  DR L L  RM +EG+ PN  +F  +L    D   +  A  +H  V + G  G+VV
Sbjct: 214 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV 273

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL++MY +   V ++ AVF+ M  R+ ++WN+M+A +        AF  +  M  
Sbjct: 274 --VATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQ 331

Query: 274 AGAELTRSTFVSVIKLC--ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            G    + TFV+ +K    +++++L  +  LH  +   G++ D  + T L+  Y   G +
Sbjct: 332 EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAI 391

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A   F  +   K++VSW AM++ +  NG    A+  F  M R+ + PN  +Y  +L  
Sbjct: 392 DRARAAFDAI-PAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGC 450

Query: 392 QPAVSPFQ-VHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
              VS  + +HA ++    + +  S+   ++  + + G L+EA   F+    KD V+W+ 
Sbjct: 451 CEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNT 510

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            +A  +   D  GA+  +  +  EG +P++FT  SV++ C A    +E G+     SI+ 
Sbjct: 511 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVC-ADLGTLELGR-----SIQQ 564

Query: 510 KLNNAL------CVSSALVTMYSKKGN-IESASEVFKR--QRKRDLVSWNSMICGYAQHG 560
           +L+ A+       V+SA++ M +K G+ ++    +F R    ++DLV+WN+MI  YAQHG
Sbjct: 565 QLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHG 624

Query: 561 HTKKALEVFKEMR-RQDLEFDGITFIGVITACTHAGLVDEGQQYF----DIMVNEHHIYP 615
           H +KAL++F+ M+ R  +  D  TF+ V++ C+HAGLV++G   F    +++  E     
Sbjct: 625 HGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQ--- 681

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            +EHY+C+VD+  R G L +A D I +MP  A + VW ++L AC                
Sbjct: 682 PVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAF 741

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA-GYSWIEVKNKTYSFLA 720
           I L   DS  YV+LSN+YAA G W++  RVR+ M +R+VKK   G S I VKN+ + F A
Sbjct: 742 IELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFA 801

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
            D SHPQS+ IY++LE L   +++AGY PDT  VL D+++E KE +L  HSE+LAIAFGL
Sbjct: 802 RDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGL 861

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
           ++ P    ++++KNLRVC DCHT  K I+++ +R+I VRD NRFHHF K+G CSCGDYW
Sbjct: 862 ISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 163/655 (24%), Positives = 292/655 (44%), Gaps = 51/655 (7%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL+ +L+ C    D   GRQ+H + VK G AR+  +   LV +Y +  +++D    F  +
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI---KPNSFTFSTVLGVLAD----- 191
               + +W +L++  +       V +L+ RM++E     +PN  T   VLG +A      
Sbjct: 86  RSRGIATWNTLIAAQSSPAA---VFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSS 142

Query: 192 -----EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI 246
                   +A A  VH  +  +  E    V  AL+  Y K   V  A  VF  ++  D I
Sbjct: 143 SSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 202

Query: 247 TWNSMVAGYVTNELHME-AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
            WN+ +     N+   + A      M L G    R++FV+++  C     L LAR +H++
Sbjct: 203 CWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHAR 262

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           V + G   D  + T L+  Y +CG ++++  +F  M  +++ VSW AMI+   Q G    
Sbjct: 263 VEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAM-AVRNHVSWNAMIAAFAQCGHRSA 321

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVS------PFQVHAHIIKTNYEKSFSVGTAL 419
           A   + +M +EG RPN  T+   L A  + S         +H  I     E    VGTAL
Sbjct: 322 AFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTAL 381

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           +  Y   G +D A   F+ I  K+IV+W+AML  Y   G    A++++  +  + + PN+
Sbjct: 382 VTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNK 441

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKL-NNALCVSSALVTMYSKKGNIESASEVF 538
            ++ +V+  C      V + +  HA  +   L      +++ +V M+++ G++E A   F
Sbjct: 442 VSYLAVLGCCE----DVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAF 497

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
                +D VSWN+ +   +       A+  F  M+ +    D  T + V+  C   G ++
Sbjct: 498 DATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLE 557

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG-MLEKAMDIINRMPFAASATV-WRTVL 656
            G+     +     +   +   S ++++ ++ G  +++   +  RMP      V W T++
Sbjct: 558 LGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMI 617

Query: 657 AACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
           AA                    YA  GH ++  ++ ++M  R   +    +++ V
Sbjct: 618 AA--------------------YAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSV 652



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 252/532 (47%), Gaps = 26/532 (4%)

Query: 66  FLGIRRL---GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDL 122
            L +RR+   GL    ++  ++L +CG        R +H    + GF  DV V+T+LV +
Sbjct: 222 LLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTM 281

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           Y R  +V++   VF+ M   N VSW ++++ +A+         ++ RMQ EG +PN  TF
Sbjct: 282 YGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITF 341

Query: 183 STVLGVLADEGI--VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            T L          +  +  +H  +   G E    V  AL++MY  +  +  ARA FD +
Sbjct: 342 VTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAI 401

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             ++ ++WN+M+  Y  N    EA E F  M        + ++++V+  C    E   AR
Sbjct: 402 PAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE---AR 458

Query: 301 QLHSQVLKNGI-DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            +H++V+ NG+   + +I  G++  +++ G +E+A   F     +KD VSW   ++    
Sbjct: 459 SIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDAT-VVKDSVSWNTKVAALSA 517

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIK-----TNYEKSFS 414
              +  A+  F  M  EG RP+ FT   ++     +   ++   I +        E+   
Sbjct: 518 REDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVV 577

Query: 415 VGTALLNAYVKKG-ILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           V +A++N   K G  +DE  ++F  +  D KD+VAW+ M+A YAQ G    A+K++R + 
Sbjct: 578 VASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQ 637

Query: 472 SE-GVKPNEFTFSSVINACTAPSAAVEQGKQ--FHACSIKAKLNNALCVSSALVTMYSKK 528
               V+P+  TF SV++ C+  +  VE G    F A  +       +   + LV +  + 
Sbjct: 638 QRSSVRPDSSTFVSVLSGCS-HAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRM 696

Query: 529 GNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT---KKALEVFKEMRRQD 576
           G +  A +  ++     D V W S++   + +G     ++A   F E+ R D
Sbjct: 697 GYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSD 748



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 166/372 (44%), Gaps = 44/372 (11%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + ++ FD  P +N V +N +L  Y  +   +EA+ LF  ++R  L        S L   G
Sbjct: 393 RARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSL---APNKVSYLAVLG 449

Query: 90  CLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           C  D    R +H E V +G FA++ +++  +V ++ R+ ++E+    FD     + VSW 
Sbjct: 450 CCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWN 509

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH---TMV 205
           + ++  +  +     +  F+ MQ EG +P+ FT  +V+ V AD G +     +    +  
Sbjct: 510 TKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAA 569

Query: 206 IKNGGEVVTSVCNALISMYLK-SKMVRDARAVFDGMED--RDSITWNSMVAGYVTNELHM 262
           I+   +VV  V +A+++M  K    V +   +F  M D  +D + WN+M+A Y  +    
Sbjct: 570 IEVERDVV--VASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGR 627

Query: 263 EAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           +A + F  M   +      STFVSV+  C+           H+ ++++GI      R  L
Sbjct: 628 KALKLFRIMQQRSSVRPDSSTFVSVLSGCS-----------HAGLVEDGIHCFFLAREVL 676

Query: 322 MV-------------AYSKCGKMEDASKIFSMMREMKDVVSWTAMIS-----GHLQNGAI 363
            +                + G + +A      M    D V WT+++      G L+ G  
Sbjct: 677 GIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGG-- 734

Query: 364 DLAVNFFCQMTR 375
           + A   F ++ R
Sbjct: 735 ERAARAFIELYR 746


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/692 (38%), Positives = 390/692 (56%), Gaps = 56/692 (8%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVT 257
           Q+H+ +IK G        + LI     S    +  A  +F+ +E  +   WN+M+ G   
Sbjct: 50  QIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSL 109

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +   + A + +  M L G E    TF  ++K CA     +  +Q+H  VLK G++ D  +
Sbjct: 110 SSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFV 169

Query: 318 RTGLMVAYSKCGKMEDASKIFS----------------------------MMREM--KDV 347
            T L+  Y++ G++  A  +FS                            +  E+  +D 
Sbjct: 170 HTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDA 229

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAH 403
           VSW AMI+G+ Q+G  + A+ FF +M R  V PN  T   +L+A       +    V + 
Sbjct: 230 VSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSW 289

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I       +  +  AL++ Y K G LD+A  +FE I EKDI++W+ M+ GY+ +   + A
Sbjct: 290 IEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEA 349

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL---NNALCVSSA 520
           + ++R++    V+PN+ TF S++ AC A   A++ GK  HA   K  L   N +L  S  
Sbjct: 350 LALFRKMQQSNVEPNDVTFVSILPAC-AYLGALDLGKWIHAYIDKKFLGLTNTSLWTS-- 406

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+ MY+K GNIE+A +VF   + + L SWN+MI G A HGH   ALE+F++MR +  E D
Sbjct: 407 LIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPD 466

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITF+GV++AC+HAGLV+ G+Q F  MV ++ I P ++HY CM+DL  RAG+ ++A  ++
Sbjct: 467 DITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALM 526

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
             M       +W ++L ACR              L  L+P +   YVLLSN+YA  G W 
Sbjct: 527 KNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWD 586

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + AR+R  +ND+ +KK  G S IEV +  + FL GD  H QS  IY  L+E+   L+ AG
Sbjct: 587 DVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAG 646

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           + PDTS VL D+D+E KE  LS HSE+LAIAFGL++T     ++IVKNLRVCG+CH+ IK
Sbjct: 647 HVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIK 706

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LISK+  R+I+ RD NRFHHFK+G CSC DYW
Sbjct: 707 LISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 242/510 (47%), Gaps = 50/510 (9%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRT--NNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +Q+H + +K+G        + L++    +   N+     +F+ + + N   W +++ G +
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE---- 211
            +      ++ + RM + G++PNS+TF  +L   A  G      Q+H  V+K G E    
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPF 168

Query: 212 VVTSVCN---------------------------ALISMYLKSKMVRDARAVFDGMEDRD 244
           V TS+ N                           ALI+ Y     + DAR +F+ +  RD
Sbjct: 169 VHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRD 228

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
           +++WN+M+AGY  +    EA   F  M  A      ST V+V+  CA +  L L   + S
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            +  +G+  +  +   L+  YSKCG ++ A  +F  + E KD++SW  MI G+    +  
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE-KDIISWNVMIGGYSHMNSYK 347

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYE-KSFSVGTAL 419
            A+  F +M +  V PN  T+  IL A   +        +HA+I K      + S+ T+L
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           ++ Y K G ++ A +VF  +  K + +W+AM++G A  G    A++++RQ+  EG +P++
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467

Query: 480 FTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESA 534
            TF  V++AC+  +  VE G+Q  +       I  KL +  C    ++ +  + G  + A
Sbjct: 468 ITFVGVLSACSH-AGLVELGRQCFSSMVEDYDISPKLQHYGC----MIDLLGRAGLFDEA 522

Query: 535 SEVFKR-QRKRDLVSWNSMICGYAQHGHTK 563
             + K  + K D   W S++     HG+ +
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVE 552



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 203/397 (51%), Gaps = 45/397 (11%)

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL-----MVAYSKCGKMEDASKIFSMM 341
           + L +T K  +  +Q+HSQ++K G+   HN +  L       A S  G +  A  +F  +
Sbjct: 36  LTLLSTCKSFQNLKQIHSQIIKTGL---HNTQFALSKLIEFCAISPFGNLSYALLLFESI 92

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
            +    + W  MI G+  + +   A++F+ +M   GV PN +T+  +L +   V      
Sbjct: 93  EQPNQFI-WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEG 151

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVK-------------------------------K 426
            Q+H H++K   E    V T+L+N Y +                               +
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G LD+A ++FE I  +D V+W+AM+AGYAQ G  E A+  ++++    V PNE T  +V+
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVL 271

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           +AC A S ++E G    +      L + L + +AL+ MYSK G+++ A ++F+   ++D+
Sbjct: 272 SAC-AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDI 330

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           +SWN MI GY+     K+AL +F++M++ ++E + +TF+ ++ AC + G +D G+     
Sbjct: 331 ISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAY 390

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  +         ++ ++D+Y++ G +E A  +   M
Sbjct: 391 IDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGM 427



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 230/519 (44%), Gaps = 48/519 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+   Q N   +N ++      S    A++ ++ +   G+     T   +LK+C  +  
Sbjct: 88  LFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV------------------------ 129
              G+Q+H   +K G   D  V TSL+++Y +   +                        
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 130 -------EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
                  +D RR+F+++   + VSW ++++GYA++   +  L  F  M+   + PN  T 
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
            TVL   A  G +     V + +  +G      + NALI MY K   +  AR +F+G+ +
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           +D I+WN M+ GY     + EA   F  M  +  E    TFVS++  CA    L L + +
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387

Query: 303 HSQVLKNGIDF-DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           H+ + K  +   + ++ T L+  Y+KCG +E A ++F+ M+  K + SW AMISG   +G
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKP-KSLGSWNAMISGLAMHG 446

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYEKSFSVG-- 416
             ++A+  F QM  EG  P+  T+  +L+A       ++      +   +Y+ S  +   
Sbjct: 447 HANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHY 506

Query: 417 TALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSEG 474
             +++   + G+ DEA  + + ++ K D   W ++L      G+ E G          E 
Sbjct: 507 GCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEP 566

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
             P  +   S I A          G+      I+ KLN+
Sbjct: 567 ENPGAYVLLSNIYATA--------GRWDDVARIRTKLND 597



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 115/229 (50%), Gaps = 7/229 (3%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + LF+   +++ + +N ++  Y   + ++EAL LF  +++  +     T  S+L  C 
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376

Query: 90  CLFDHVFGRQVHCECVKSGFA-RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            L     G+ +H    K      + ++ TSL+D+Y +  N+E  ++VF  M   ++ SW 
Sbjct: 377 YLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWN 436

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++SG A +   +  LELF +M+ EG +P+  TF  VL   +  G+V    Q  + ++++
Sbjct: 437 AMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVED 496

Query: 209 ---GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVA 253
                ++    C  +I +  ++ +  +A A+   ME + D   W S++ 
Sbjct: 497 YDISPKLQHYGC--MIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLG 543


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/700 (36%), Positives = 397/700 (56%), Gaps = 34/700 (4%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M  EG    S  +  +L    + G +  A  VH  + K G      V  +L++ Y++   
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            RDAR +FDGM +R+ +TW ++V GY  N       E F  M   G   +  T  + +  
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C  + ++ L +Q+H   +K G +   ++   L   Y+K G ++ A + F  + E K+V++
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE-KNVIT 247

Query: 350 WTAMISGHLQNG-AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           WT MIS   ++   ++L ++ F  M  +GV PN FT + +++            QV A  
Sbjct: 248 WTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 307

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG-- 462
            K   E +  V  + +  Y++KG  DEA ++FE +++  I+ W+AM++GYAQI D+    
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 367

Query: 463 ---------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
                    A+ I+R L    +KP+ FTFSS+++ C+A   A+EQG+Q HA +IK+   +
Sbjct: 368 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSA-MMALEQGEQIHAQTIKSGFLS 426

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V+SALV MY+K G I+ A++ F     R  V+W SMI GY+QHG  ++A+++F+EMR
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +  + ITF+ +++AC++AGLV+E + YFD+M  E+ I P ++HY CM+D++ R G +
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 546

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
           E A   I R  F  +  +W +++A CR              L+ L+P     Y+LL NMY
Sbjct: 547 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMY 606

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
            +T  WQ+ ARVRKLM    V      SWI +K+K Y F A D +HPQ+ ++Y  LE L 
Sbjct: 607 ISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLL 666

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAI--LSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
            + K  GY+P  +  L D +D+ K A   L  HSERLA+A GL+ TP GA +++ KN+ +
Sbjct: 667 EKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITM 726

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           C DCH+ IKL S LE R+I+VRD+ R H FK+G CSCGD+
Sbjct: 727 CRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 245/487 (50%), Gaps = 18/487 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R VH    K+G   D+ V+TSLV+ YMR     D RR+FD M E NVV+WT+L++GY  
Sbjct: 97  ARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTL 156

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      LE+F  M   G  P+ +T    L        V    QVH   IK G E +TS+
Sbjct: 157 NSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSM 216

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME-AFETFNNMGLAG 275
            N+L S+Y K   +  A   F  + +++ ITW +M++    +E  +E     F +M + G
Sbjct: 217 GNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDG 276

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 T  SV+ LC T  +L L +Q+ +   K G + +  ++   M  Y + G+ ++A 
Sbjct: 277 VMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAM 336

Query: 336 KIFSMMREMKDVVSWTAMISGHLQ---NGAIDL--------AVNFFCQMTREGVRPNGFT 384
           ++F  M E   +++W AMISG+ Q   +   DL        A+  F  + R  ++P+ FT
Sbjct: 337 RLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFT 395

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +S IL+   A+       Q+HA  IK+ +     V +AL+N Y K G + +A K F  + 
Sbjct: 396 FSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMP 455

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            +  V W++M++GY+Q G  + A++++ ++   GV+PNE TF S+++AC+      E   
Sbjct: 456 TRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEH 515

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
            F     +  +   +     ++ M+ + G +E A    KR   + +   W+S++ G   H
Sbjct: 516 YFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSH 575

Query: 560 GHTKKAL 566
           G+ + A 
Sbjct: 576 GNMELAF 582



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 227/479 (47%), Gaps = 52/479 (10%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           ++  + LFD  P+RN V +  L+  Y  +S     L +F+ +  +G      TL + L  
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C    D   G+QVH   +K G     ++  SL  LY +  +++   R F  + E NV++W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 148 TSLLSGYARNKMNDRV-LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           T+++S  A ++    + L LF  M ++G+ PN FT ++V+ +      +    QV     
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY------VTNEL 260
           K G E    V N+ + +YL+     +A  +F+ MED   ITWN+M++GY        ++L
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368

Query: 261 H-----MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                  +A   F ++  +  +    TF S++ +C+    L    Q+H+Q +K+G   D 
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV 428

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y+KCG ++DA+K F  M   +  V+WT+MISG+ Q+G    A+  F +M  
Sbjct: 429 VVNSALVNMYNKCGCIQDANKAFLEM-PTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL 487

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            GVRPN  T+                                +LL+A    G+++EA   
Sbjct: 488 AGVRPNEITF-------------------------------VSLLSACSYAGLVEEAEHY 516

Query: 436 FELIDEKDIVA-----WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           F+++ ++  +      +  M+  + ++G  E A    ++    G +PNE  +SS++  C
Sbjct: 517 FDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAGC 572



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 132/263 (50%), Gaps = 20/263 (7%)

Query: 11  INPQTKQPPKSLRSPFYSKKDQS-----LFDRSPQRNFVEYNRLLFEYC------RDSLH 59
           I  +T  P K+     Y +K ++     LF++    + + +N ++  Y       +D L 
Sbjct: 310 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 369

Query: 60  Q-----EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
                 +AL +F  ++R  +     T SS+L  C  +     G Q+H + +KSGF  DV 
Sbjct: 370 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 429

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
           V+++LV++Y +   ++D  + F +M     V+WTS++SGY+++      ++LF  M++ G
Sbjct: 430 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 489

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDA 233
           ++PN  TF ++L   +  G+V  A     M+ K    E V      +I M+++   V DA
Sbjct: 490 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 549

Query: 234 RAVFD--GMEDRDSITWNSMVAG 254
            +     G E  ++I W+S+VAG
Sbjct: 550 FSFIKRTGFEPNEAI-WSSLVAG 571


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/799 (34%), Positives = 446/799 (55%), Gaps = 48/799 (6%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM- 139
           L +++  C CL +   GR++H +     F  +  +  +L+ +Y +  ++ D ++ FD + 
Sbjct: 144 LIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLP 203

Query: 140 --NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP-NSFTFSTVLGVLADEGIVA 196
             ++ +VV+W +++S + RN      L+LF  M  +G  P NS TF +VL    + G+++
Sbjct: 204 RASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLS 263

Query: 197 --TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS----ITWNS 250
                 +H  ++  G E    V  AL+  Y K   + DA  VF    D +     +T ++
Sbjct: 264 LEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSA 323

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           M++    N    E+   F  M L G + +  T VSV+  C+  +         + VL+  
Sbjct: 324 MISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQ----VGSATAFVLEQA 379

Query: 311 IDF-----DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           ++      D+ + T L+  Y++   +  A   F  ++   DVVSW AM + +LQ+     
Sbjct: 380 MEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQS-PDVVSWNAMAAAYLQHHRSRE 438

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSP-------FQVHAHIIKTNYEKSFSVGTA 418
           A+  F +M  EGVRP+  T+   LTA  A  P        ++ + + +   E   +V  A
Sbjct: 439 ALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANA 498

Query: 419 LLNAYVKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-V 475
            LN Y K G L +A  VFE I    +D + W++MLA Y   G  + A ++++ + +E  V
Sbjct: 499 TLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLV 558

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
           KPN+ TF +V++A T+ ++ + QG++ HA  +     +   + +AL+ MY+K G+++ A 
Sbjct: 559 KPNKVTFVAVLDASTSRTS-IAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQ 617

Query: 536 EVFKRQ--RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
            +F +    + D+++W S+I GYAQ+G  ++AL++F  M++Q +  + +TFI  +TAC H
Sbjct: 618 AIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNH 677

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            G +++G +    M  +H I P  +H+SC+VDL  R G L++A  ++ R    A    W 
Sbjct: 678 GGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWM 736

Query: 654 TVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
            +L AC              R++ L P  ++ Y++L++MYAA G W E A +RK M D+ 
Sbjct: 737 ALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKG 796

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           ++ + G S +EV  + +SF AGD SHP+S +IY +LE L   +K AGY  DT  VL D+ 
Sbjct: 797 IRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVS 856

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
            EHKE +L +HSE+LAIAFGL++TP+G+PL+++KNLRVC DCHT  KLISK+  RDI++R
Sbjct: 857 QEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMR 916

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D++R+HHF  G CSCGDYW
Sbjct: 917 DSSRYHHFTSGTCSCGDYW 935



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 166/591 (28%), Positives = 302/591 (51%), Gaps = 39/591 (6%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNV------STSLVDLYMRTNNVEDG 132
           ST   +L+ CG L     G+++H        +R +++      ++ L+ ++ +  N+ + 
Sbjct: 44  STYGCLLQACGRLRALKQGQRLHAHI----LSRRIDLHNHSFLASDLIVMHAKCGNLAEA 99

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
             + D    ++V S T+++  +  +   D+ +ELF RM+V   +PN      ++   +  
Sbjct: 100 EALADRF--ASVYSCTAMIRAWMEHGRPDKAMELFDRMEV---RPNCHALIALVNACSCL 154

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM---EDRDSITWN 249
           G +A   ++H+ +     E  + + NALISMY K   + DA+  FD +     RD +TWN
Sbjct: 155 GNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWN 214

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRL--ARQLHSQV 306
           +M++ ++ N    EA + F +M   GA    S TFVSV+  C     L L   R +H ++
Sbjct: 215 AMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRI 274

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD-----VVSWTAMISGHLQNG 361
           +  GI+ +  +RT L+ +Y K G ++DA ++F  +R+  +     +V+ +AMIS   QNG
Sbjct: 275 VGAGIEREAFVRTALVDSYGKLGSLDDAWEVF--LRKGDEEPSTSLVTCSAMISACWQNG 332

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE-----KSFSVG 416
               ++  F  M  EG +P+G T   +L A   +      A +++   E     +   +G
Sbjct: 333 WPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLG 392

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           T LL  Y +   L  A   F+ I   D+V+W+AM A Y Q   +  A+ ++ ++  EGV+
Sbjct: 393 TTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVR 452

Query: 477 PNEFTFSSVINACTA--PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           P+  TF + + AC A  P  A   GK+  +   +A L     V++A + MY+K G++  A
Sbjct: 453 PSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADA 512

Query: 535 SEVFKR--QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL-EFDGITFIGVITAC 591
             VF+R    +RD ++WNSM+  Y  HG  K+A E+F+ M  + L + + +TF+ V+ A 
Sbjct: 513 RAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDAS 572

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           T    + +G++    +V+      T+   + ++++Y++ G L+ A  I ++
Sbjct: 573 TSRTSIAQGREIHARVVSNGFESDTVIQ-NALLNMYAKCGSLDDAQAIFDK 622



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 279/554 (50%), Gaps = 48/554 (8%)

Query: 35  FDRSP---QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTC-- 88
           FDR P   +R+ V +N ++  + R+   +EAL LF  + R G P   S T  SVL +C  
Sbjct: 199 FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVE 258

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF----DDMNESNV 144
             L      R +H   V +G  R+  V T+LVD Y +  +++D   VF    D+   +++
Sbjct: 259 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSL 318

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT- 203
           V+ ++++S   +N      L LF  M +EG KP+  T  +VL          + +QV + 
Sbjct: 319 VTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLN-------ACSMLQVGSA 371

Query: 204 --MVIKNGGEVVTS-----VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
              V++   EVV++     +   L++ Y +S  +  ARA FD ++  D ++WN+M A Y+
Sbjct: 372 TAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYL 431

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT---TKELRLARQLHSQVLKNGIDF 313
            +    EA   F  M L G   + +TF++ +  CA         + +++ S + + G++ 
Sbjct: 432 QHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEG 491

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
           D  +    +  Y+KCG + DA  +F  +    +D ++W +M++ +  +G    A   F  
Sbjct: 492 DTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQA 551

Query: 373 MTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           M  E  V+PN  T+  +L A  + +      ++HA ++   +E    +  ALLN Y K G
Sbjct: 552 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCG 611

Query: 428 ILDEAAKVFEL--IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            LD+A  +F+    +++D++AW++++AGYAQ G  E A+K++  +  +GV+PN  TF S 
Sbjct: 612 SLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISA 671

Query: 486 INACTAPSAAVEQGKQFHACSIKAKL---NNALCVS---SALVTMYSKKGNIESASEVFK 539
           + AC         GK    C + + +   +  L  S   S +V +  + G ++ A ++ +
Sbjct: 672 LTACN------HGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLE 725

Query: 540 RQRKRDLVSWNSMI 553
           R  + D+++W +++
Sbjct: 726 RTSQADVITWMALL 739



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 20/339 (5%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + ++ FD     + V +N +   Y +    +EAL LF  +   G+    +T  + L  C 
Sbjct: 407 RARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACA 466

Query: 90  CLFDHV---FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES--NV 144
                     G+++     ++G   D  V+ + +++Y +  ++ D R VF+ ++ +  + 
Sbjct: 467 AYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDC 526

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           ++W S+L+ Y  + +     ELF  M+ E  +KPN  TF  VL        +A   ++H 
Sbjct: 527 ITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHA 586

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD--GMEDRDSITWNSMVAGYVTNELH 261
            V+ NG E  T + NAL++MY K   + DA+A+FD       D I W S++AGY      
Sbjct: 587 RVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQA 646

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG- 320
             A + F  M   G      TF+S +  C    +L    +L S     G+  DH I    
Sbjct: 647 ERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLS-----GMTPDHGILPAS 701

Query: 321 -----LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
                ++    +CG++++A K+     +  DV++W A++
Sbjct: 702 KHFSCIVDLLGRCGRLDEAEKLLERTSQ-ADVITWMALL 739


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/747 (34%), Positives = 426/747 (57%), Gaps = 21/747 (2%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           ++V  + +++  Y+++ N+   R +FD M + +VV+WT L+ GYA++        LF  M
Sbjct: 71  KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              G+ P+  T +T+L    +   V    QVH  V+K G +    VCN+L+  Y K++ +
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL 190

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             A  +F  M ++D++T+N+++ GY     + +A   F  M   G   +  TF +V+   
Sbjct: 191 GLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAG 250

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
               ++   +Q+HS V+K    ++  +   L+  YSK  ++ +A K+F  M E+ D +S+
Sbjct: 251 IQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEV-DGISY 309

Query: 351 TAMISGHLQNGAIDLAVNFF--CQMTREGVR--PNGFTYSIILTAQPAVSPFQVHAHIIK 406
             +I+    NG ++ ++  F   Q TR   R  P     SI   +       Q+H+  I 
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIV 369

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           T+      VG +L++ Y K     EA ++F  +  +  V W+A+++GY Q G  E  +K+
Sbjct: 370 TDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKL 429

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + ++    +  +  T++S++ AC A  A++  GKQ H+  I++   + +   SALV MY+
Sbjct: 430 FVEMHRAKIGADSATYASILRAC-ANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYA 488

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G+I+ A ++F+    R+ VSWN++I  YAQ+G    AL  F++M    L+ + ++F+ 
Sbjct: 489 KCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLS 548

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           ++ AC+H GLV+EG QYF+ M   + + P  EHY+ MVD+  R+G  ++A  ++ RMPF 
Sbjct: 549 ILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFE 608

Query: 647 ASATVWRTVLAACRLISLQP---------------HDSAIYVLLSNMYAATGHWQERARV 691
               +W ++L +CR+   Q                 D+A YV +SN+YAA G W    +V
Sbjct: 609 PDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKV 668

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           +K + +R ++K   YSW+E+K KT+ F A D SHPQ+ +I  KL+EL  ++++ GYKPD+
Sbjct: 669 KKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDS 728

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           +  L ++D+E K   L  HSER+AIAF L++TP G+P+ ++KNLR C DCH  IK+ISK+
Sbjct: 729 TCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKI 788

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             R+I VRD++RFHHF +G CSC DYW
Sbjct: 789 VNREITVRDSSRFHHFTDGSCSCKDYW 815



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 284/549 (51%), Gaps = 12/549 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +SLFD   QR+ V +  L+  Y + +   EA NLF  + R G+     TL+++L      
Sbjct: 93  RSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEF 152

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                  QVH   VK G+   + V  SL+D Y +T ++     +F  M E + V++ +LL
Sbjct: 153 ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALL 212

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL--GVLADEGIVATAVQVHTMVIKNG 209
           +GY++   N   + LF +MQ  G +P+ FTF+ VL  G+  D+  +    QVH+ V+K  
Sbjct: 213 TGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDD--IEFGQQVHSFVVKCN 270

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V NAL+  Y K   + +AR +F  M + D I++N ++     N    E+ E F 
Sbjct: 271 FVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFR 330

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +     +  +  F +++ + A +  L + RQ+HSQ +      +  +   L+  Y+KC 
Sbjct: 331 ELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCD 390

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           K  +A++IF+ +   +  V WTA+ISG++Q G  +  +  F +M R  +  +  TY+ IL
Sbjct: 391 KFGEANRIFADLAH-QSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASIL 449

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   ++      Q+H+ II++    +   G+AL++ Y K G + EA ++F+ +  ++ V
Sbjct: 450 RACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSV 509

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHA 504
           +W+A+++ YAQ GD   A++ + Q+   G++PN  +F S++ AC+     VE+G Q F++
Sbjct: 510 SWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSH-CGLVEEGLQYFNS 568

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
            +   KL       +++V M  + G  + A ++  R   + D + W+S++     H + +
Sbjct: 569 MTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQE 628

Query: 564 KALEVFKEM 572
            A++   ++
Sbjct: 629 LAIKAADQL 637



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 37/279 (13%)

Query: 399 QVHAHIIKTNYEK-----SFSVGTAL--------------------------LNAYVKKG 427
            V A +IKT ++      +F V T L                          +  Y+K G
Sbjct: 28  HVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSG 87

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            L  A  +F+ + ++ +V W+ ++ GYAQ      A  ++  +   G+ P+  T +++++
Sbjct: 88  NLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLS 147

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
             T    +V +  Q H   +K   ++ L V ++L+  Y K  ++  A  +FK   ++D V
Sbjct: 148 GFT-EFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEF--DGITFIGVITACTHAGLVDEGQQYFD 605
           ++N+++ GY++ G    A+ +F +M  QDL F     TF  V+TA      ++ GQQ   
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKM--QDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
            +V  + ++      + ++D YS+   + +A  +   MP
Sbjct: 265 FVVKCNFVWNVFV-ANALLDFYSKHDRIVEARKLFYEMP 302


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/743 (35%), Positives = 425/743 (57%), Gaps = 40/743 (5%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           +V  S   +  +MR   V D  R+F  M   +  ++ ++L+GY+ N        LF  + 
Sbjct: 37  EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP 96

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMV 230
               +P++++++T+L  LA    +A A  +   M +++     +   N +IS +    +V
Sbjct: 97  ----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRD-----SVTYNVMISSHANHGLV 147

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             AR  FD   ++D+++WN M+A YV N    EA   FN+      E    ++ +++   
Sbjct: 148 SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR----TEWDAISWNALMSGY 203

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA-YSKCGKMEDASKIFSMMREMKDVVS 349
               ++  AR+L  ++    +     +   +MV+ Y++ G M +A ++F     ++DV +
Sbjct: 204 VQWGKMSEARELFDRMPGRDV-----VSWNIMVSGYARRGDMVEARRLFDAA-PVRDVFT 257

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY 409
           WTA++SG+ QNG ++ A   F  M       N  +++ ++ A            +     
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMP 313

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
            ++ +    +L  Y + G+L+EA  VF+ + +KD V+W+AMLA Y+Q G +E  ++++ +
Sbjct: 314 CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIE 373

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +   G   N   F+ V++ C A  AA+E G Q H   I+A       V +AL+ MY K G
Sbjct: 374 MGRCGEWVNRSAFACVLSTC-ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCG 432

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
           N+E A   F+   +RD+VSWN+MI GYA+HG  K+ALE+F  MR    + D IT +GV+ 
Sbjct: 433 NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 492

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC+H+GLV++G  YF  M ++  +    EHY+CM+DL  RAG L +A D++  MPF   +
Sbjct: 493 ACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 552

Query: 650 TVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
           T+W  +L A R+                L+P ++ +YVLLSN+YA++G W++  ++R +M
Sbjct: 553 TMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMM 612

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
            +R VKK  G+SWIEV+NK ++F AGD  HP+  +IY+ LE+L  R+K AGY   T  VL
Sbjct: 613 EERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVL 672

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
            D+++E KE +L  HSE+LA+A+G++  P G P++++KNLRVCGDCH   K IS +E R 
Sbjct: 673 HDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRL 732

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           I++RD+NRFHHF+ G CSCGDYW
Sbjct: 733 ILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 244/538 (45%), Gaps = 52/538 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-----LGLPLFGSTLSSVLK 86
           + LF   P+R+   YN +L  Y  +     A +LF  I R         L    +SS L 
Sbjct: 58  ERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLA 117

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               LFD +               RD      ++  +     V   R  FD   E + VS
Sbjct: 118 DARGLFDEMP-------------VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVS 164

Query: 147 WTSLLSGYARNKMNDRVLELFH-RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W  +L+ Y RN   +    LF+ R + + I  N+     V       G ++ A ++   +
Sbjct: 165 WNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYV-----QWGKMSEARELFDRM 219

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
              G +VV+   N ++S Y +   + +AR +FD    RD  TW ++V+GY  N +  EA 
Sbjct: 220 --PGRDVVS--WNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEAR 275

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F+ M     E    ++ +++      + +  A++L + +    +   + + TG    Y
Sbjct: 276 RVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTG----Y 327

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           ++ G +E+A  +F  M + KD VSW AM++ + Q G  +  +  F +M R G   N   +
Sbjct: 328 AQAGMLEEAKAVFDTMPQ-KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAF 386

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +L+    ++      Q+H  +I+  Y     VG ALL  Y K G +++A   FE ++E
Sbjct: 387 ACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+V+W+ M+AGYA+ G  + A++I+  + +   KP++ T   V+ AC+  S  VE+G  
Sbjct: 447 RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH-SGLVEKGIS 505

Query: 502 F-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           +     H   + AK  +  C    ++ +  + G +  A ++ K    + D   W +++
Sbjct: 506 YFYSMHHDFGVTAKPEHYTC----MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 9/288 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ +++FD  PQ++ V +  +L  Y +    +E L LF+ + R G  +  S  + VL TC
Sbjct: 334 EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTC 393

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G Q+H   +++G+     V  +L+ +Y +  N+ED R  F++M E +VVSW 
Sbjct: 394 ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWN 453

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           ++++GYAR+      LE+F  M+    KP+  T   VL   +  G+V   +   ++M   
Sbjct: 454 TMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 513

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG---YVTNELHME 263
            G          +I +  ++  + +A  +   M  + DS  W +++     +   EL   
Sbjct: 514 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRS 573

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           A E    +    A +    +V +  + A++ + R AR++   + + G+
Sbjct: 574 AAEKIFELEPENAGM----YVLLSNIYASSGKWRDARKMRVMMEERGV 617



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 154/354 (43%), Gaps = 48/354 (13%)

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV-------------- 378
           DAS   S  R   +V+     I+ H++ G +  A   F  M R                 
Sbjct: 24  DASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG 83

Query: 379 -------------RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
                        RP+ ++Y+ +L A    S       +      +       +++++  
Sbjct: 84  RLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHAN 143

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G++  A   F+L  EKD V+W+ MLA Y + G  E A  ++          N  T    
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----------NSRTEWDA 193

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQRKR 544
           I+     S  V+ GK   A  +  ++     VS + +V+ Y+++G++  A  +F     R
Sbjct: 194 ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR 253

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D+ +W +++ GYAQ+G  ++A  VF  M     E + +++  ++ A     ++DE ++ F
Sbjct: 254 DVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELF 309

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           ++M   +     +  ++ M+  Y++AGMLE+A  + + MP    A  W  +LAA
Sbjct: 310 NMMPCRN-----VASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/853 (30%), Positives = 446/853 (52%), Gaps = 89/853 (10%)

Query: 41  RNFVEYNRLL--FEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           RN++++N  +  F+    SLH   L +F  +   G+       S  LKTC  + D   G 
Sbjct: 95  RNYLKWNSFVEEFKSSAGSLHI-VLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGM 153

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H   +K GF  DV +  +L++ Y R   +E   +VF +M     + W   +    +++
Sbjct: 154 EIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSE 213

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
              + +ELF +MQ   +K  + T   VL      G +  A Q+H  V + G +   S+CN
Sbjct: 214 KLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCN 273

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA------------------------- 253
            LISMY K+  +  AR VFD ME+R++ +WNSM++                         
Sbjct: 274 PLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 333

Query: 254 ----------GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
                     G+  +    E       M   G +   S+  SV++  +    L + ++ H
Sbjct: 334 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETH 393

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
             VL+NG D D  + T L+  Y K   +  A  +F  M+  +++ +W +++SG+   G  
Sbjct: 394 GYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN-RNIFAWNSLVSGYSFKGMF 452

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAY 423
           + A+    QM +EG++P+  T++                                +++ Y
Sbjct: 453 EDALRLLNQMEKEGIKPDLVTWN-------------------------------GMISGY 481

Query: 424 VKKGILDEAAKVFE----LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
              G   EA  V      L    ++V+W+A+++G +Q G+   ++K + Q+  EGV PN 
Sbjct: 482 AMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNS 541

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
            + + ++ AC + S  +++GK+ H  SI+      + V++AL+ MYSK  ++++A +VF+
Sbjct: 542 ASITCLLRACASLSL-LQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 600

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
           R + + L SWN MI G+A  G  K+A+ VF EM++  +  D ITF  +++AC ++GL+ E
Sbjct: 601 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGE 660

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G +YFD M+ ++ I P +EHY CMVDL  RAG L++A D+I+ MP    AT+W  +L +C
Sbjct: 661 GWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 720

Query: 660 R--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           R              L  L+P++SA Y+L+ N+Y+    W++   +R+LM    V+    
Sbjct: 721 RIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQV 780

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
           +SWI++  + + F + +  HP + +IY +L +L + +K  GY PD + V Q++D+  K+ 
Sbjct: 781 WSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQK 840

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
           IL  H+E+LAI +GL+   AG P++++KN R+C DCH+  K IS ++ R++ +RD  RFH
Sbjct: 841 ILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFH 900

Query: 826 HFKEGLCSCGDYW 838
           HF+EG CSC D+W
Sbjct: 901 HFREGKCSCNDFW 913


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/739 (35%), Positives = 423/739 (57%), Gaps = 40/739 (5%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
           S   +  +MR   V D  R+F  M   +  ++ ++L+GY+ N        LF  +     
Sbjct: 41  SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP---- 96

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           +P++++++T+L  LA    +A A  +   M +++     +   N +IS +    +V  AR
Sbjct: 97  RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRD-----SVTYNVMISSHANHGLVSLAR 151

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
             FD   ++D+++WN M+A YV N    EA   FN+      E    ++ +++       
Sbjct: 152 HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR----TEWDVISWNALMSGYVQWG 207

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVA-YSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           ++  AR+L  ++    +     +   +MV+ Y++ G M +A ++F     ++DV +WTA+
Sbjct: 208 KMSEARELFDRMPGRDV-----VSWNIMVSGYARRGDMVEARRLFDAA-PVRDVFTWTAV 261

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF 413
           +SG+ QNG ++ A   F  M       N  +++ ++ A            +      ++ 
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV 317

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           +    +L  Y + G+L+EA  VF+ + +KD V+W+AMLA Y+Q G +E  ++++ ++   
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G   N   F+ V++ C A  AA+E G Q H   I+A       V +AL+ MY K GN+E 
Sbjct: 378 GEWVNRSAFACVLSTC-ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED 436

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A   F+   +RD+VSWN+MI GYA+HG  K+ALE+F  MR    + D IT +GV+ AC+H
Sbjct: 437 ARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH 496

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
           +GLV++G  YF  M ++  +    EHY+CM+DL  RAG L +A D++  MPF   +T+W 
Sbjct: 497 SGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWG 556

Query: 654 TVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
            +L A R+                L+P ++ +YVLLSN+YA++G W++  ++R +M +R 
Sbjct: 557 ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERG 616

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           VKK  G+SWIEV+NK ++F AGD  HP+  +IY+ LE+L  R+K AGY   T  VL D++
Sbjct: 617 VKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVE 676

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           +E KE +L  HSE+LA+A+G++  P G P++++KNLRVCGDCH   K IS +E R I++R
Sbjct: 677 EEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFKYISAIEGRLILLR 736

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D+NRFHHF+ G CSCGDYW
Sbjct: 737 DSNRFHHFRGGSCSCGDYW 755



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 244/538 (45%), Gaps = 52/538 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-----LGLPLFGSTLSSVLK 86
           + LF   P+R+   YN +L  Y  +     A +LF  I R         L    +SS L 
Sbjct: 58  ERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLA 117

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               LFD +               RD      ++  +     V   R  FD   E + VS
Sbjct: 118 DARGLFDEMP-------------VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVS 164

Query: 147 WTSLLSGYARNKMNDRVLELFH-RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W  +L+ Y RN   +    LF+ R + + I  N+     V       G ++ A ++   +
Sbjct: 165 WNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYV-----QWGKMSEARELFDRM 219

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
              G +VV+   N ++S Y +   + +AR +FD    RD  TW ++V+GY  N +  EA 
Sbjct: 220 --PGRDVVS--WNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEAR 275

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F+ M     E    ++ +++      + +  A++L + +    +   + + TG    Y
Sbjct: 276 RVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTG----Y 327

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           ++ G +E+A  +F  M + KD VSW AM++ + Q G  +  +  F +M R G   N   +
Sbjct: 328 AQAGMLEEAKAVFDTMPQ-KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAF 386

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +L+    ++      Q+H  +I+  Y     VG ALL  Y K G +++A   FE ++E
Sbjct: 387 ACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+V+W+ M+AGYA+ G  + A++I+  + +   KP++ T   V+ AC+  S  VE+G  
Sbjct: 447 RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH-SGLVEKGIS 505

Query: 502 F-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           +     H   + AK  +  C    ++ +  + G +  A ++ K    + D   W +++
Sbjct: 506 YFYSMHHDFGVTAKPEHYTC----MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 9/288 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ +++FD  PQ++ V +  +L  Y +    +E L LF+ + R G  +  S  + VL TC
Sbjct: 334 EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTC 393

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G Q+H   +++G+     V  +L+ +Y +  N+ED R  F++M E +VVSW 
Sbjct: 394 ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWN 453

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           ++++GYAR+      LE+F  M+    KP+  T   VL   +  G+V   +   ++M   
Sbjct: 454 TMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 513

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG---YVTNELHME 263
            G          +I +  ++  + +A  +   M  + DS  W +++     +   EL   
Sbjct: 514 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRS 573

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           A E    +    A +    +V +  + A++ + R AR++   + + G+
Sbjct: 574 AAEKIFELEPENAGM----YVLLSNIYASSGKWRDARKMRVMMEERGV 617



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 155/354 (43%), Gaps = 48/354 (13%)

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV-------------- 378
           DAS   S  R   +V+     I+ H++ G +  A   F  M R                 
Sbjct: 24  DASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG 83

Query: 379 -------------RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
                        RP+ ++Y+ +L A    S       +      +       +++++  
Sbjct: 84  RLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHAN 143

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G++  A   F+L  EKD V+W+ MLA Y + G  E A  ++          N  T   V
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----------NSRTEWDV 193

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQRKR 544
           I+     S  V+ GK   A  +  ++     VS + +V+ Y+++G++  A  +F     R
Sbjct: 194 ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR 253

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D+ +W +++ GYAQ+G  ++A  VF  M     E + +++  ++ A     ++DE ++ F
Sbjct: 254 DVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELF 309

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           ++M   +     +  ++ M+  Y++AGMLE+A  + + MP    A  W  +LAA
Sbjct: 310 NMMPCRN-----VASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/660 (38%), Positives = 385/660 (58%), Gaps = 21/660 (3%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           A Q H ++++ G    T + N L+   L     + A  VF      +   +N+++ G V+
Sbjct: 19  AKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVS 78

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHN 316
           N+   +A   + +M   G      TF  V+K C        +   LHS V+K G D+D  
Sbjct: 79  NDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVF 138

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           ++TGL+  YSK G + DA K+F  + E K+VVSWTA+I G++++G    A+  F  +   
Sbjct: 139 VKTGLVCLYSKNGFLTDARKVFDEIPE-KNVVSWTAIICGYIESGCFGEALGLFRGLLEM 197

Query: 377 GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           G+RP+ FT   IL A   V        +  ++ ++    +  V T+L++ Y K G ++EA
Sbjct: 198 GLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEA 257

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            +VF+ + EKD+V WSA++ GYA  G  + A+ ++ ++  E V+P+ +    V +AC+  
Sbjct: 258 RRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRL 317

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
             A+E G          +  +   + +AL+  Y+K G++  A EVFK  R++D V +N++
Sbjct: 318 -GALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAV 376

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I G A  GH   A  VF +M +  ++ DG TF+G++  CTHAGLVD+G +YF  M +   
Sbjct: 377 ISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFS 436

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----------- 661
           + PT+EHY CMVDL +RAG+L +A D+I  MP  A++ VW  +L  CRL           
Sbjct: 437 VTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVL 496

Query: 662 ---ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
              I L+P +S  YVLLSN+Y+A+  W E  ++R  +N + ++K  G SW+EV    + F
Sbjct: 497 KQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEF 556

Query: 719 LAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAF 778
           L GD SHP S++IY KLE L   L++AGY P T +VL D+++E KE  L  HSE+LA+AF
Sbjct: 557 LVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAF 616

Query: 779 GLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            L++T A   +++VKNLRVCGDCH  IKL+SK+  R+I+VRD NRFHHF EG CSC DYW
Sbjct: 617 ALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 221/463 (47%), Gaps = 19/463 (4%)

Query: 22  LRSPFYSKKDQS---LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFG 78
           LRS  +    Q    +F ++P  N   YN L+     +   ++A++++  +R+ G     
Sbjct: 42  LRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDN 101

Query: 79  STLSSVLKTCGCLFDHVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF 136
            T   VLK C  L  H F  G  +H   +K+GF  DV V T LV LY +   + D R+VF
Sbjct: 102 FTFPFVLKACTRL-PHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVF 160

Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           D++ E NVVSWT+++ GY  +      L LF  +   G++P+SFT   +L   +  G +A
Sbjct: 161 DEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLA 220

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
           +   +   + ++G      V  +L+ MY K   + +AR VFDGM ++D + W++++ GY 
Sbjct: 221 SGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYA 280

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           +N +  EA + F  M            V V   C+    L L     ++ L +G +F  N
Sbjct: 281 SNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNW--ARGLMDGDEFLSN 338

Query: 317 --IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             + T L+  Y+KCG +  A ++F  MR  KD V + A+ISG    G +  A   F QM 
Sbjct: 339 PVLGTALIDFYAKCGSVAQAKEVFKGMRR-KDCVVFNAVISGLAMCGHVGAAFGVFGQMV 397

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT------ALLNAYVKKGI 428
           + G++P+G T+  +L             H   +     FSV         +++   + G+
Sbjct: 398 KVGMQPDGNTFVGLLCGCTHAGLVD-DGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGL 456

Query: 429 LDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           L EA  +   +  E + + W A+L G     DT+ A  + +QL
Sbjct: 457 LVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQL 499



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 12/156 (7%)

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           ++ Q KQ H   ++  L+    + + L+         + A+ VF +    ++  +N++I 
Sbjct: 15  SLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIR 74

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           G   +   + A+ V+  MR+     D  TF  V+ ACT          YF + ++ H + 
Sbjct: 75  GMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRL------PHYFHVGLSLHSLV 128

Query: 615 PTMEH------YSCMVDLYSRAGMLEKAMDIINRMP 644
                       + +V LYS+ G L  A  + + +P
Sbjct: 129 IKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP 164


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/747 (34%), Positives = 420/747 (56%), Gaps = 35/747 (4%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +L+  Y R       RR+ D+M   N VS+  L+  Y+R  +    LE   R +  G+  
Sbjct: 48  TLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDV 107

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           + F+++  L   +  G +     VH + I +G      V N+L+SMY K   + +AR VF
Sbjct: 108 DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF 167

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-- 295
           D  E+RD ++WNS+V+GYV      E    F  M   G  L      SVIK C+   +  
Sbjct: 168 DVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGT 227

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           + +A  +H  V+K G+D D  + + ++  Y+K G + +A+ +F  ++E  +VV +  MI+
Sbjct: 228 MDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE-PNVVMFNTMIA 286

Query: 356 GHLQNGAI------DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           G  +   +        A+  + ++   G++P  FT+S +L A           Q+H  +I
Sbjct: 287 GFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVI 346

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K  +++   +G+AL++ Y   G +++  + F    + DIV W+AM++G  Q    E A+ 
Sbjct: 347 KYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALS 406

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++ +    G+KP+ FT SSV+NAC A  A    G+Q    + K+  +    + ++ V MY
Sbjct: 407 LFHESLGAGLKPDLFTISSVMNAC-ASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMY 465

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           ++ G++++A+  F+     D+VSW+++I  +AQHG  + AL  F EM    +  + ITF+
Sbjct: 466 ARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFL 525

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
           GV+TAC+H GLVDEG +Y++ M  ++ + PT++H +C+VDL  RAG L  A   I+   F
Sbjct: 526 GVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIF 585

Query: 646 AASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARV 691
            A   +WR++LA+C              R++ L+P  SA YV+L NMY   G     ++ 
Sbjct: 586 HADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKT 645

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           R LM  R VKKE G SWIE+K   +SF+AGD SHP+S+ IY+KLEE+ +R++      DT
Sbjct: 646 RDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLA-TTDT 704

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
                    + ++ +++ HSE+LA+A G++  P  AP++++KNLRVC DCH+ +KLISK 
Sbjct: 705 EI------SKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKS 758

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           E R+I++RD  RFHHF++G CSC DYW
Sbjct: 759 ENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/547 (28%), Positives = 275/547 (50%), Gaps = 21/547 (3%)

Query: 22  LRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           L  P  +++   L D  P+RN V +N L+  Y R+ L   +L      RR G+ +   + 
Sbjct: 56  LGGPLPARR---LLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSY 112

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           ++ L  C        GR VH   +  G +  V VS SLV +Y +   + + RRVFD   E
Sbjct: 113 AAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEE 172

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA--DEGIVATAV 199
            + VSW SL+SGY R    + ++ +F  M+  G+  NSF   +V+   +   +G +  A 
Sbjct: 173 RDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAE 232

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY---- 255
            VH  VIK G +    + +A+I MY K   + +A A+F  +++ + + +N+M+AG+    
Sbjct: 233 AVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTE 292

Query: 256 --VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
             +  E+  EA   ++ +   G + T  TF SV++ C     L   +Q+H QV+K     
Sbjct: 293 TVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQE 352

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  I + L+  Y   G MED  + F    +  D+V+WTAM+SG +QN   + A++ F + 
Sbjct: 353 DDFIGSALIDLYFNSGCMEDGFRCFRSSPK-HDIVTWTAMVSGCVQNELHEKALSLFHES 411

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
              G++P+ FT S ++ A  +++      Q+     K+ +++   +G + ++ Y + G +
Sbjct: 412 LGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDV 471

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           D A + F+ ++  D+V+WSA+++ +AQ G    A+  + ++    V PNE TF  V+ AC
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 490 TAPSAAVEQGKQFHACSIKA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQR--KRDL 546
           +     V++G +++    K   L+  +   + +V +  + G +  A E F        D 
Sbjct: 532 S-HGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADA-EAFISNSIFHADP 589

Query: 547 VSWNSMI 553
           V W S++
Sbjct: 590 VIWRSLL 596



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 212/431 (49%), Gaps = 15/431 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N L++ Y +      AR + D M  R+++++N ++  Y    L   + ET      AG +
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           + R ++ + +  C+    LR  R +H+  + +G+     +   L+  YSKCG+M +A ++
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS- 396
           F +  E +D VSW +++SG+++ GA +  V  F  M R G+  N F    ++        
Sbjct: 167 FDVAEE-RDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGD 225

Query: 397 -----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                   VH  +IK   +    + +A+++ Y KKG L EAA +F  + E ++V ++ M+
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMI 285

Query: 452 AGYAQIGDTEG------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           AG+ +     G      A+ +Y ++ S G++P EFTFSSV+ AC   +  +E GKQ H  
Sbjct: 286 AGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNL-AGYLEFGKQIHGQ 344

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            IK        + SAL+ +Y   G +E     F+   K D+V+W +M+ G  Q+   +KA
Sbjct: 345 VIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKA 404

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L +F E     L+ D  T   V+ AC    +   G+Q             T+   SC V 
Sbjct: 405 LSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSC-VH 463

Query: 626 LYSRAGMLEKA 636
           +Y+R+G ++ A
Sbjct: 464 MYARSGDVDAA 474



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 165/341 (48%), Gaps = 12/341 (3%)

Query: 27  YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCR------DSLHQEALNLFLGIRRLGLP 75
           Y+KK       +LF    + N V +N ++  +CR        +  EAL L+  ++  G+ 
Sbjct: 257 YAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQ 316

Query: 76  LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV 135
               T SSVL+ C       FG+Q+H + +K  F  D  + ++L+DLY  +  +EDG R 
Sbjct: 317 PTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRC 376

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           F    + ++V+WT+++SG  +N+++++ L LFH     G+KP+ FT S+V+   A   + 
Sbjct: 377 FRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVA 436

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
               Q+     K+G +  T + N+ + MY +S  V  A   F  ME  D ++W+++++ +
Sbjct: 437 RAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCH 496

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFD 314
             +    +A   F+ M  A       TF+ V+  C+    +    + +  + K+ G+   
Sbjct: 497 AQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPT 556

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               T ++    + G++ DA    S      D V W ++++
Sbjct: 557 IKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLA 597


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/588 (39%), Positives = 373/588 (63%), Gaps = 22/588 (3%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M + G E+    +  ++  C   + +R  +++H+ ++K        + T L++ Y+KC  
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +  A  +F  MRE ++VVSWTAMISG+ Q G    A++ F QM R    PN FT++ +L+
Sbjct: 61  LGCARHVFDEMRE-RNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLS 119

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +    S F    Q+H+HI K NYE    VG++LL+ Y K G + EA  VFE + E+D+V+
Sbjct: 120 SCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVS 179

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            +A+++GYAQ+G  E A++++ +L  EG+  N  T++S++ A +   AA++ GKQ H+  
Sbjct: 180 CTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSG-LAALDHGKQVHSHV 238

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           ++ +L   + + ++L+ MYSK GN+  A ++F     R ++SWN+M+ GY++HG   + +
Sbjct: 239 LRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVV 298

Query: 567 EVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE-HHIYPTMEHYSCMV 624
           ++FK MR ++ ++ D +TF+ V++ C+H GL D+G + FD M+N    I   +EHY C++
Sbjct: 299 KLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVI 358

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           DL  RAG +E+A ++I +MPF  +A +W ++L ACR              L+ ++P ++ 
Sbjct: 359 DLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAG 418

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YV+LSN+YA+ G W++   VR+LM ++ V KE G SWIE+    ++F A D SHP+  +
Sbjct: 419 NYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREE 478

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           ++ K+ EL  + K++GY PD S VL D+D+E KE IL  HSE+LA+AFGL++T  G PL+
Sbjct: 479 VFLKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLR 538

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++KNLR+C DCH   K +SK+  R + +RD NRFHH   G+CSCGDYW
Sbjct: 539 VIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 157/296 (53%), Gaps = 2/296 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH   +K+ +   V +ST L+ LY +   +   R VFD+M E NVVSWT+++SGY++
Sbjct: 29  GQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQ 88

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  L LF +M     +PN FTF+TVL             Q+H+ + K   E    V
Sbjct: 89  RGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFV 148

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY K+  + +AR VF+ + +RD ++  ++++GY    L  EA E F  +   G 
Sbjct: 149 GSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGM 208

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                T+ S++   +    L   +Q+HS VL+  + F   ++  L+  YSKCG +  A K
Sbjct: 209 SSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARK 268

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTA 391
           IF+ M  ++ V+SW AM+ G+ ++G     V  F  M  E  V+P+  T+  +L+ 
Sbjct: 269 IFNNM-PVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSG 323



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 163/327 (49%), Gaps = 3/327 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +RN V +  ++  Y +     EAL+LF+ + R        T ++VL +C   
Sbjct: 65  RHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGF 124

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQ+H    K  +   + V +SL+D+Y +   + + R VF+ + E +VVS T+++
Sbjct: 125 SGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAII 184

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+  +++  LELF R+Q EG+  N  T++++L  L+    +    QVH+ V++    
Sbjct: 185 SGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELP 244

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + N+LI MY K   +  AR +F+ M  R  I+WN+M+ GY  +   +E  + F  M
Sbjct: 245 FYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLM 304

Query: 272 GLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-TGLMV-AYSKC 328
                    S TF++V+  C+         ++  +++  G + +  I   G ++    + 
Sbjct: 305 REENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRA 364

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMIS 355
           G++E+A ++   M        W +++ 
Sbjct: 365 GRVEEAFELIKKMPFEPTAAIWGSLLG 391


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/619 (40%), Positives = 370/619 (59%), Gaps = 29/619 (4%)

Query: 247  TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
            +WNS++A        +EA   F+++   G   TRS+F   IK C+   +L   R  H Q 
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168

Query: 307  LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               G + D  + + L+  YSKCG+++DA  +F  +  +++VVSWT+MI+G++QN   D A
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI-PLRNVVSWTSMITGYVQNEQADNA 1227

Query: 367  VNFFCQMTRE--------GVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFS 414
            +  F     E         V  +      +L+A   VS       VH  ++K  ++ S  
Sbjct: 1228 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 1287

Query: 415  VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE- 473
            VG  L++AY K G    + KVF+ ++EKD ++W++M+A YAQ G +  A++++  +    
Sbjct: 1288 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 1347

Query: 474  GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            GV+ N  T S+V+ AC A + A+  GK  H   IK  L   +CV ++++ MY K G +E 
Sbjct: 1348 GVRYNAVTLSAVLLAC-AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 1406

Query: 534  ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
            A + F R +++++ SW +M+ GY  HG  K+AL++F +M R  ++ + ITF+ V+ AC+H
Sbjct: 1407 AKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSH 1466

Query: 594  AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            AGLV+EG  +F+ M +++ I P +EHY CMVDL+ RAG L +A ++I RM       VW 
Sbjct: 1467 AGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWG 1526

Query: 654  TVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
            ++L ACR              L  L P +   YVLLSN+YA  G W +  R+R LM +R+
Sbjct: 1527 SLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQ 1586

Query: 700  VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
            + K  G+S +E+K + + FL GD  HP    IY  LE+L+  L+  GY P+ + VL D+D
Sbjct: 1587 LVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVD 1646

Query: 760  DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
            +E KE IL  HSE+LA+AFG++ +  G  + I+KNLRVCGDCHTVIKLISKL  RD VVR
Sbjct: 1647 EEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVR 1706

Query: 820  DTNRFHHFKEGLCSCGDYW 838
            D+ RFHHFK+G+CSCGDYW
Sbjct: 1707 DSKRFHHFKDGVCSCGDYW 1725



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/460 (31%), Positives = 228/460 (49%), Gaps = 28/460 (6%)

Query: 13   PQTKQPPKSLRSP----FYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG 68
            P +++ P SL S     FY   D+S        N   +N ++ +  R     EAL  F  
Sbjct: 1081 PSSRRRPVSLSSNLATWFYKYVDKS--------NVHSWNSVIADLARGGDSVEALRAFSS 1132

Query: 69   IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN 128
            +R+LGL    S+    +K+C  L D V GR  H +    GF  D+ VS++L+D+Y +   
Sbjct: 1133 LRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQ 1192

Query: 129  VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELF-----HRMQVE---GIKPNSF 180
            ++D R +FD++   NVVSWTS+++GY +N+  D  L LF        +VE    +  +S 
Sbjct: 1193 LKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSV 1252

Query: 181  TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
               +VL   +          VH  V+K G +    V N L+  Y K      ++ VFD M
Sbjct: 1253 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWM 1312

Query: 241  EDRDSITWNSMVAGYVTNELHMEAFETFNNMGL-AGAELTRSTFVSVIKLCATTKELRLA 299
            E++D I+WNSM+A Y  + L  EA E F+ M    G      T  +V+  CA    LR  
Sbjct: 1313 EEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAG 1372

Query: 300  RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            + +H QV+K  ++++  + T ++  Y KCG++E A K F  M+E K+V SWTAM++G+  
Sbjct: 1373 KCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKE-KNVKSWTAMVAGYGM 1431

Query: 360  NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII-----KTNYEKSFS 414
            +G    A++ F +M R GV+PN  T+  +L A       +   H       K + E    
Sbjct: 1432 HGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE 1491

Query: 415  VGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAG 453
                +++ + + G L+EA  + + +  K D V W ++L  
Sbjct: 1492 HYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 1531



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 193/384 (50%), Gaps = 37/384 (9%)

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           L    K  +  RQ+H++++++G+  D  +   L+  YS  G++  A  +F  ++      
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN-PCTF 91

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           +W  +I  +  NG  + A+  +  M  +G+  + FT+  ++ A            VH  +
Sbjct: 92  TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151

Query: 405 IKTNYEKSFSVGTALLNAYVKKG-------------------------------ILDEAA 433
           IK  +     V   L++ Y K G                                L EA 
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           ++F+ I  K++V+W+AM+ GY +    E A+++++++ +E + PNE+T  S+I ACT   
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE-M 270

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             +  G+  H  +IK  +   + + +AL+ MYSK G+I+ A EVF+   ++ L +WNSMI
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
                HG  ++AL +F EM R +++ D ITFIGV+ AC H   V EG  YF  M   + I
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAM 637
            P  EHY CM +LY+R+  L++A 
Sbjct: 391 APIPEHYECMTELYARSNNLDEAF 414



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 128/273 (46%), Gaps = 31/273 (11%)

Query: 56  DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNV 115
           + L ++AL L+  +   G+     T   V+K C        G+ VH   +K GF+ DV V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 116 STSLVDLY---------------MRTNNV----------------EDGRRVFDDMNESNV 144
             +L+D Y               MR  NV                ++ RR+FD++   NV
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSWT++++GY RN+  +  LELF RMQ E I PN +T  +++    + GI+     +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            IKN  E+   +  ALI MY K   ++DA  VF+ M  +   TWNSM+     + L  EA
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
              F+ M     +    TF+ V+  C   K ++
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVK 375



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 34/331 (10%)

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           F H+  RQ+H + ++SG + D  ++  L+ LY     +     +F  +      +W  ++
Sbjct: 40  FKHL--RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
                N ++++ L L+  M  +GI  + FTF  V+    +   +     VH  +IK G  
Sbjct: 98  RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157

Query: 212 VVTSVCNALISMYLKSKMVR-------------------------------DARAVFDGM 240
               V N LI  Y K    R                               +AR +FD +
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             ++ ++W +M+ GY+ N+   EA E F  M          T VS+IK C     L L R
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +H   +KN I+    + T L+  YSKCG ++DA ++F  M   K + +W +MI+    +
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR-KSLPTWNSMITSLGVH 336

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           G    A+N F +M R  V+P+  T+  +L A
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCA 367



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 146/324 (45%), Gaps = 34/324 (10%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  +I++G      +   LI +Y     +  A  +F  +++  + TWN ++     N 
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  +A   + NM   G    + TF  VIK C     + L + +H  ++K G   D  ++ 
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 320 GLMVAYSKCGKMEDASKIFSMMR------------------------------EMKDVVS 349
            L+  Y KCG    A K+F  MR                                K+VVS
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHII 405
           WTAMI+G+++N   + A+  F +M  E + PN +T   ++ A   +        +H + I
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K   E    +GTAL++ Y K G + +A +VFE +  K +  W++M+      G  + A+ 
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALN 344

Query: 466 IYRQLTSEGVKPNEFTFSSVINAC 489
           ++ ++    VKP+  TF  V+ AC
Sbjct: 345 LFSEMERVNVKPDAITFIGVLCAC 368



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 138/291 (47%), Gaps = 34/291 (11%)

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+HA II++       +   L++ Y   G +  A  +F  I       W+ ++      G
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            +E A+ +Y+ +  +G+  ++FTF  VI ACT    +++ GK  H   IK   +  + V 
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTN-FLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNS--------------------------- 551
           + L+  Y K G+   A +VF++ R R++VSW +                           
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 552 ----MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
               MI GY ++   ++ALE+FK M+ +++  +  T + +I ACT  G++  G+   D  
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           + ++ I   +   + ++D+YS+ G ++ A+++   MP   S   W +++ +
Sbjct: 284 I-KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITS 332



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 9/169 (5%)

Query: 432  AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
            A   ++ +D+ ++ +W++++A  A+ GD+  A++ +  L   G+ P   +F   I +C+A
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154

Query: 492  PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
                V  G+  H  +        L VSSAL+ MYSK G ++ A  +F     R++VSW S
Sbjct: 1155 LCDLV-SGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTS 1213

Query: 552  MICGYAQHGHTKKALEVFKEMRRQDLE--------FDGITFIGVITACT 592
            MI GY Q+     AL +FK+   ++ E         D +  + V++AC+
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 1262



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 82/158 (51%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ + +FD  P +N V +  ++  Y R+   +EAL LF  ++   +     T+ S++K C
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKAC 267

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     GR +H   +K+     V + T+L+D+Y +  +++D   VF+ M   ++ +W 
Sbjct: 268 TEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWN 327

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL 186
           S+++    + +    L LF  M+   +KP++ TF  VL
Sbjct: 328 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 2/159 (1%)

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           +Q HA  I++ L+N   ++  L+ +YS  G I  A  +F + +     +WN +I     +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G +++AL ++K M  Q +  D  TF  VI ACT+   +D G+     ++ ++     +  
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI-KYGFSGDVFV 162

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            + ++D Y + G    A+ +  +M    +   W TV++ 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMR-VRNVVSWTTVISG 200



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 534  ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
            A+  +K   K ++ SWNS+I   A+ G + +AL  F  +R+  L     +F   I +C+ 
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154

Query: 594  AGLVDEG----QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
               +  G    QQ F +   E  ++ +    S ++D+YS+ G L+ A  + + +P 
Sbjct: 1155 LCDLVSGRMSHQQAF-VFGFETDLFVS----SALIDMYSKCGQLKDARALFDEIPL 1205


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 275/821 (33%), Positives = 441/821 (53%), Gaps = 24/821 (2%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            + +FD     + + +N ++  +  +   +  L LFL +    +     T++SV    G L
Sbjct: 252  RKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             +  F +++H   VK GFA DV    SL+ +Y     + D  ++F  M   + +SWT+++
Sbjct: 312  SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            SGY +N   D+ LE++  M++  + P+  T ++ L   A  G +   +++H +    G  
Sbjct: 372  SGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                V NAL+ MY KSK +  A  VF  M ++D ++W+SM+AG+  N    +A   F  M
Sbjct: 432  RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM 491

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             L   +    TF++ +  CA T  LR  +++H+ VL+ GI  +  +   L+  Y KCG+ 
Sbjct: 492  -LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT 550

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
              A   FS+  E KDVVSW  M+SG + +G  D+A++ F QM    +   G   ++   A
Sbjct: 551  SYAWAQFSVHSE-KDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACA 609

Query: 392  QPAVSPFQVHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
                    +  H +  N  + +   V  ALL  Y K   +D+A +VF+ + EKD+V+WS+
Sbjct: 610  CLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 669

Query: 450  MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            M+AG+     +  A+  +R +    VKPN  TF + ++AC A + A+  GK+ HA  ++ 
Sbjct: 670  MIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAA-TGALRSGKEIHAYVLRC 727

Query: 510  KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             + +   V +AL+ +Y K G    A   F    ++D+VSWN M+ G+  HG    AL +F
Sbjct: 728  GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 787

Query: 570  KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             +M       D +TF+ ++ AC+ AG+V +G + F     +  I P ++HY+CMVDL SR
Sbjct: 788  NQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSR 846

Query: 630  AGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLL 675
             G L +A ++INRMP    A VW  +L  CR+              + L+P+D A +VLL
Sbjct: 847  VGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLL 906

Query: 676  SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
             ++Y   G W + ARVRK M ++ ++++ G SW+EVK  T++FL  D SHPQ  +I   L
Sbjct: 907  CDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVL 966

Query: 736  EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
              +  R+K  G+ P  S   +++ ++    IL  HSERLA+AFGL+ T  G  + + KN 
Sbjct: 967  HGIYERMKACGFAPVESLEDKEVSEDD---ILCGHSERLAVAFGLINTTPGTTISVTKNR 1023

Query: 796  RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
              C  CH + K IS++ RR+I VRDT + H FK+G CSCGD
Sbjct: 1024 YTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 1064



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 169/578 (29%), Positives = 294/578 (50%), Gaps = 20/578 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F + P+R+   +N ++  Y +    +EAL+L+  +   G+     T   VL+TCG + D
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR+VH   ++ GF  +V+V  +LV +Y +  ++   R+VFD M  ++ +SW ++++G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAG 272

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGG 210
           +  N   +  LELF  M    ++PN  T ++V    G+L++ G    A ++H   +K G 
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGF---AKEMHGFAVKRGF 329

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +  + CN+LI MY     + DA  +F  ME +D+++W +M++GY  N    +A E +  
Sbjct: 330 AIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYAL 389

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L        T  S +  CA    L +  +LH      G      +   L+  Y+K   
Sbjct: 390 MELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 449

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++ A ++F  M E KDVVSW++MI+G   N     A+ +F  M    V+PN  T+   L+
Sbjct: 450 IDKAIEVFKFMAE-KDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALS 507

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A  A        ++HA++++        V  ALL+ YVK G    A   F +  EKD+V+
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVS 567

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQL--TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           W+ ML+G+   G  + A+ ++ Q+  TS G        ++      A    ++ G + H 
Sbjct: 568 WNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAA-----CACLGRLDVGIKLHE 622

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
            +        + V++AL+ MY+K  +I+ A EVFK   ++D+VSW+SMI G+  +  +  
Sbjct: 623 LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFD 682

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           AL  F+ M    ++ + +TFI  ++AC   G +  G++
Sbjct: 683 ALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKE 719



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 166/551 (30%), Positives = 272/551 (49%), Gaps = 13/551 (2%)

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           + +  +++ + +R   +    RVF  M E +V SW  ++ GY +    +  L+L++RM  
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G++P+ +TF  VL             +VH  V++ G      V NAL++MY K   +  
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFDGM   D I+WN+M+AG+  N       E F  M     +    T  SV      
Sbjct: 251 ARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             E+  A+++H   +K G   D      L+  Y+  G+M DA KIFS M E KD +SWTA
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM-ETKDAMSWTA 369

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           MISG+ +NG  D A+  +  M    V P+  T +  L A   +    V   + +    K 
Sbjct: 370 MISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429

Query: 413 F----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           F     V  ALL  Y K   +D+A +VF+ + EKD+V+WS+M+AG+     +  A+  +R
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFR 489

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            +    VKPN  TF + ++AC A + A+  GK+ HA  ++  + +   V +AL+ +Y K 
Sbjct: 490 YMLGH-VKPNSVTFIAALSACAA-TGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKC 547

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G    A   F    ++D+VSWN M+ G+  HG    AL +F +M    L   G      +
Sbjct: 548 GQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACS--AL 605

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHI-YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
            AC   G +D G +  ++  N+  I Y  +   + ++++Y+++  ++KA+++   M    
Sbjct: 606 AACACLGRLDVGIKLHELAQNKGFIRYVVVA--NALLEMYAKSKHIDKAIEVFKFMA-EK 662

Query: 648 SATVWRTVLAA 658
               W +++A 
Sbjct: 663 DVVSWSSMIAG 673



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           L S    P+E  + ++   C     AV+ G +  A +     +  L + +A+++M  + G
Sbjct: 87  LESSPEPPDEGAYVALFRLCEW-RRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
            I  A  VF +  +RD+ SWN M+ GY + G  ++AL+++  M    +  D  TF  V+ 
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205

Query: 590 AC 591
            C
Sbjct: 206 TC 207


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/619 (40%), Positives = 370/619 (59%), Gaps = 29/619 (4%)

Query: 247  TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
            +WNS++A        +EA   F+++   G   TRS+F   IK C+   +L   R  H Q 
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041

Query: 307  LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               G + D  + + L+  YSKCG+++DA  +F  +  +++VVSWT+MI+G++QN   D A
Sbjct: 2042 FVFGFETDLFVSSALIDMYSKCGQLKDARALFDEI-PLRNVVSWTSMITGYVQNEQADNA 2100

Query: 367  VNFFCQMTRE--------GVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFS 414
            +  F     E         V  +      +L+A   VS       VH  ++K  ++ S  
Sbjct: 2101 LLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 2160

Query: 415  VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE- 473
            VG  L++AY K G    + KVF+ ++EKD ++W++M+A YAQ G +  A++++  +    
Sbjct: 2161 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 2220

Query: 474  GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            GV+ N  T S+V+ AC A + A+  GK  H   IK  L   +CV ++++ MY K G +E 
Sbjct: 2221 GVRYNAVTLSAVLLAC-AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 2279

Query: 534  ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
            A + F R +++++ SW +M+ GY  HG  K+AL++F +M R  ++ + ITF+ V+ AC+H
Sbjct: 2280 AKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSH 2339

Query: 594  AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            AGLV+EG  +F+ M +++ I P +EHY CMVDL+ RAG L +A ++I RM       VW 
Sbjct: 2340 AGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWG 2399

Query: 654  TVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
            ++L ACR              L  L P +   YVLLSN+YA  G W +  R+R LM +R+
Sbjct: 2400 SLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQ 2459

Query: 700  VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
            + K  G+S +E+K + + FL GD  HP    IY  LE+L+  L+  GY P+ + VL D+D
Sbjct: 2460 LVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDVD 2519

Query: 760  DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
            +E KE IL  HSE+LA+AFG++ +  G  + I+KNLRVCGDCHTVIKLISKL  RD VVR
Sbjct: 2520 EEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVHRDFVVR 2579

Query: 820  DTNRFHHFKEGLCSCGDYW 838
            D+ RFHHFK+G+CSCGDYW
Sbjct: 2580 DSKRFHHFKDGVCSCGDYW 2598



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 227/458 (49%), Gaps = 28/458 (6%)

Query: 13   PQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL 72
            P  ++   +L + FY   D+S        N   +N ++ +  R     EAL  F  +R+L
Sbjct: 1958 PSGREDHSNLATWFYKYVDKS--------NVHSWNSVIADLARGGDSVEALRAFSSLRKL 2009

Query: 73   GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG 132
            GL    S+    +K+C  L D V GR  H +    GF  D+ VS++L+D+Y +   ++D 
Sbjct: 2010 GLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDA 2069

Query: 133  RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELF-----HRMQVE---GIKPNSFTFST 184
            R +FD++   NVVSWTS+++GY +N+  D  L LF        +VE    +  +S    +
Sbjct: 2070 RALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVS 2129

Query: 185  VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
            VL   +          VH  V+K G +    V N L+  Y K      ++ VFD ME++D
Sbjct: 2130 VLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKD 2189

Query: 245  SITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
             I+WNSM+A Y  + L  EA E F+ M    G      T  +V+  CA    LR  + +H
Sbjct: 2190 DISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIH 2249

Query: 304  SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
             QV+K  ++++  + T ++  Y KCG++E A K F  M+E K+V SWTAM++G+  +G  
Sbjct: 2250 DQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKE-KNVKSWTAMVAGYGMHGRA 2308

Query: 364  DLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVG 416
              A++ F +M R GV+PN  T+  +L A       +     F    H  K + E      
Sbjct: 2309 KEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKH--KYDIEPGIEHY 2366

Query: 417  TALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAG 453
              +++ + + G L+EA  + + +  K D V W ++L  
Sbjct: 2367 GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 193/384 (50%), Gaps = 37/384 (9%)

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           L    K  +  RQ+H++++++G+  D  +   L+  YS  G++  A  +F  ++      
Sbjct: 33  LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN-PCTF 91

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           +W  +I  +  NG  + A+  +  M  +G+  + FT+  ++ A            VH  +
Sbjct: 92  TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL 151

Query: 405 IKTNYEKSFSVGTALLNAYVKKG-------------------------------ILDEAA 433
           IK  +     V   L++ Y K G                                L EA 
Sbjct: 152 IKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           ++F+ I  K++V+W+AM+ GY +    E A+++++++ +E + PNE+T  S+I ACT   
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE-M 270

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             +  G+  H  +IK  +   + + +AL+ MYSK G+I+ A EVF+   ++ L +WNSMI
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
                HG  ++AL +F EM R +++ D ITFIGV+ AC H   V EG  YF  M   + I
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAM 637
            P  EHY CM +LY+R+  L++A 
Sbjct: 391 APIPEHYECMTELYARSNNLDEAF 414



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 128/273 (46%), Gaps = 31/273 (11%)

Query: 56  DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNV 115
           + L ++AL L+  +   G+     T   V+K C        G+ VH   +K GF+ DV V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 116 STSLVDLY---------------MRTNNV----------------EDGRRVFDDMNESNV 144
             +L+D Y               MR  NV                ++ RR+FD++   NV
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSWT++++GY RN+  +  LELF RMQ E I PN +T  +++    + GI+     +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            IKN  E+   +  ALI MY K   ++DA  VF+ M  +   TWNSM+     + L  EA
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
              F+ M     +    TF+ V+  C   K ++
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVK 375



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 34/331 (10%)

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           F H+  RQ+H + ++SG + D  ++  L+ LY     +     +F  +      +W  ++
Sbjct: 40  FKHL--RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
                N ++++ L L+  M  +GI  + FTF  V+    +   +     VH  +IK G  
Sbjct: 98  RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157

Query: 212 VVTSVCNALISMYLKSKMVR-------------------------------DARAVFDGM 240
               V N LI  Y K    R                               +AR +FD +
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             ++ ++W +M+ GY+ N+   EA E F  M          T VS+IK C     L L R
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +H   +KN I+    + T L+  YSKCG ++DA ++F  M   K + +W +MI+    +
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR-KSLPTWNSMITSLGVH 336

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           G    A+N F +M R  V+P+  T+  +L A
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCA 367



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 34/325 (10%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  +I++G      +   LI +Y     +  A  +F  +++  + TWN ++     N 
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  +A   + NM   G    + TF  VIK C     + L + +H  ++K G   D  ++ 
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 320 GLMVAYSKCGKMEDASKIFSMMR------------------------------EMKDVVS 349
            L+  Y KCG    A K+F  MR                                K+VVS
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHII 405
           WTAMI+G+++N   + A+  F +M  E + PN +T   ++ A   +        +H + I
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K   E    +GTAL++ Y K G + +A +VFE +  K +  W++M+      G  + A+ 
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALN 344

Query: 466 IYRQLTSEGVKPNEFTFSSVINACT 490
           ++ ++    VKP+  TF  V+ AC 
Sbjct: 345 LFSEMERVNVKPDAITFIGVLCACV 369



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 138/291 (47%), Gaps = 34/291 (11%)

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+HA II++       +   L++ Y   G +  A  +F  I       W+ ++      G
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            +E A+ +Y+ +  +G+  ++FTF  VI ACT    +++ GK  H   IK   +  + V 
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTN-FLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNS--------------------------- 551
           + L+  Y K G+   A +VF++ R R++VSW +                           
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 552 ----MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
               MI GY ++   ++ALE+FK M+ +++  +  T + +I ACT  G++  G+   D  
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           + ++ I   +   + ++D+YS+ G ++ A+++   MP   S   W +++ +
Sbjct: 284 I-KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITS 332



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 9/169 (5%)

Query: 432  AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
            A   ++ +D+ ++ +W++++A  A+ GD+  A++ +  L   G+ P   +F   I +C+A
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027

Query: 492  PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
                V  G+  H  +        L VSSAL+ MYSK G ++ A  +F     R++VSW S
Sbjct: 2028 LCDLV-SGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTS 2086

Query: 552  MICGYAQHGHTKKALEVFKEMRRQDLE--------FDGITFIGVITACT 592
            MI GY Q+     AL +FK+   ++ E         D +  + V++AC+
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 80/155 (51%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P +N V +  ++  Y R+   +EAL LF  ++   +     T+ S++K C  +
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR +H   +K+     V + T+L+D+Y +  +++D   VF+ M   ++ +W S++
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL 186
           +    + +    L LF  M+   +KP++ TF  VL
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 2/159 (1%)

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           +Q HA  I++ L+N   ++  L+ +YS  G I  A  +F + +     +WN +I     +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G +++AL ++K M  Q +  D  TF  VI ACT+   +D G+     ++ ++     +  
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLI-KYGFSGDVFV 162

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            + ++D Y + G    A+ +  +M    +   W TV++ 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMR-VRNVVSWTTVISG 200



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 9/116 (7%)

Query: 534  ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
            A+  +K   K ++ SWNS+I   A+ G + +AL  F  +R+  L     +F   I +C+ 
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027

Query: 594  AGLVDEG----QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
               +  G    QQ F +   E  ++ +    S ++D+YS+ G L+ A  + + +P 
Sbjct: 2028 LCDLVSGRMSHQQAF-VFGFETDLFVS----SALIDMYSKCGQLKDARALFDEIPL 2078


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 276/819 (33%), Positives = 452/819 (55%), Gaps = 45/819 (5%)

Query: 57  SLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVS 116
           S   +A++ +  +   G+P       +VLK    + D   G+Q+H    K G A    V 
Sbjct: 64  STFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVP 123

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            SLV++Y +  +++  RRVFD++   + VSW S+++   R +  +  + LF  M +E + 
Sbjct: 124 NSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183

Query: 177 PNSFTFSTVLGVLAD--EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           P SFT  +V    ++   G++    QVH  V++NG +  T   NAL++MY K   V +A+
Sbjct: 184 PTSFTLVSVAHACSNLINGLL-LGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAK 241

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            +FD  +D+D ++WN++++    N+   EA    + M  +G      T  SV+  C+  +
Sbjct: 242 TLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLE 301

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
            L   +++H+ VL N  D   N   G  L+  Y  C + E    +F  M   + +  W A
Sbjct: 302 MLGCGKEIHAFVLMNN-DLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFR-RTIAVWNA 359

Query: 353 MISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT 407
           MI+G+++N     A+  F +M  E G+ PN  T S +L A      F     +H+ ++K 
Sbjct: 360 MIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKW 419

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI- 466
            +EK   V  AL++ Y + G ++ A  +F  ++ KDIV+W+ M+ GY   G  + A+ + 
Sbjct: 420 GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLL 479

Query: 467 -----------------YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
                            Y    +  +KPN  T  +V+  C A  AA+ +GK+ HA ++K 
Sbjct: 480 HDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA-LAALGKGKEIHAYAVKQ 538

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L+  + V SALV MY+K G +  +  VF++   R++++WN +I  Y  HG  ++AL++F
Sbjct: 539 MLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLF 598

Query: 570 KEM-----RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           + M       +++  + +T+I +  + +H+G+VDEG   F  M  +H I PT +HY+C+V
Sbjct: 599 RRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLV 658

Query: 625 DLYSRAGMLEKAMDIINRMPF-AASATVWRTVLAACRL-ISLQPHDSA---IYVLLSNMY 679
           DL  R+G +E+A ++I  MP        W ++L AC++  +L+  + A   ++VL  N+ 
Sbjct: 659 DLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVL 718

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
               +  +++ + + M ++ V+KE G SWIE  ++ + FLAGD+SHPQS +++  LE LS
Sbjct: 719 ---DYGTKQSMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLS 775

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            R+K  GY PDTS VL ++ +E KE +L  HSERLAIAFGL+ T  G  +++ KNLRVC 
Sbjct: 776 LRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRVAKNLRVCN 835

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH   K ISK+  R+I++RD  RFHHF+ G CSCGDYW
Sbjct: 836 DCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 269/555 (48%), Gaps = 40/555 (7%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSVLKTCGCL 91
           +FD    R+ V +N ++   CR    + A++LF  + +  +G   F  TL SV   C  L
Sbjct: 142 VFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF--TLVSVAHACSNL 199

Query: 92  FDH-VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            +  + G+QVH   +++G  R    + +LV +Y +   V + + +FD  ++ ++VSW ++
Sbjct: 200 INGLLLGKQVHAFVLRNGDWRTF-TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTI 258

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +S  ++N   +  L   H M   G++PN  T ++VL   +   ++    ++H  V+ N  
Sbjct: 259 ISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNND 318

Query: 211 EVVTS-VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +  S V  AL+ MY   K     R VFDGM  R    WN+M+AGYV NE   EA E F 
Sbjct: 319 LIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFV 378

Query: 270 NMGLA-GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            M    G      T  SV+  C   +       +HS V+K G + D  ++  LM  YS+ 
Sbjct: 379 EMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRM 438

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE------------ 376
           G++E A  IF  M   KD+VSW  MI+G++  G  D A+N    M R             
Sbjct: 439 GRIEIARSIFGSMNR-KDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDY 497

Query: 377 ------GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
                  ++PN  T   +L    A++      ++HA+ +K    K  +VG+AL++ Y K 
Sbjct: 498 EDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKC 557

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-----VKPNEFT 481
           G L+ +  VFE +  ++++ W+ ++  Y   G  E A+K++R++  EG     ++PNE T
Sbjct: 558 GCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVT 617

Query: 482 FSSVINACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           + ++  A  + S  V++G   F+    K  +       + LV +  + G IE A  + K 
Sbjct: 618 YIAIF-ASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKT 676

Query: 541 --QRKRDLVSWNSMI 553
                + + +W+S++
Sbjct: 677 MPSNMKKVDAWSSLL 691



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 218/471 (46%), Gaps = 43/471 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++LFD    ++ V +N ++    ++   +EAL     + + G+   G TL+SVL  C  L
Sbjct: 241 KTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHL 300

Query: 92  FDHVFGRQVHC-ECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G+++H    + +    +  V  +LVD+Y      E GR VFD M    +  W ++
Sbjct: 301 EMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAM 360

Query: 151 LSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++GY RN+ +   +ELF  M  E G+ PNS T S+VL              +H+ V+K G
Sbjct: 361 IAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWG 420

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    V NAL+ MY +   +  AR++F  M  +D ++WN+M+ GYV    H +A    +
Sbjct: 421 FEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLH 480

Query: 270 NMGLAGAELTRSTF------------------VSVIKLCATTKELRLARQLHSQVLKNGI 311
           +M    AE   +TF                  ++V+  CA    L   +++H+  +K  +
Sbjct: 481 DMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQML 540

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
             D  + + L+  Y+KCG +  +  +F  M  +++V++W  +I  +  +G  + A+  F 
Sbjct: 541 SKDVAVGSALVDMYAKCGCLNLSRTVFEQM-SVRNVITWNVLIMAYGMHGKGEEALKLFR 599

Query: 372 QMTREG-----VRPNGFTYSIILTAQPAVSPFQVHAHII-----KTNYEKSFSVGTALLN 421
           +M  EG     +RPN  TY  I  +           ++      K   E +      L++
Sbjct: 600 RMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVD 659

Query: 422 AYVKKGILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
              + G ++EA  + + +  + K + AWS++L          GA KI++ L
Sbjct: 660 LLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL----------GACKIHQNL 700



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 160/354 (45%), Gaps = 26/354 (7%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKT 87
           +K + +FD   +R    +N ++  Y R+    EA+ LF+  +  LGL     TLSSVL  
Sbjct: 340 EKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPA 399

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C      +    +H   VK GF +D  V  +L+D+Y R   +E  R +F  MN  ++VSW
Sbjct: 400 CVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSW 459

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVE------------------GIKPNSFTFSTVLGVL 189
            ++++GY     +D  L L H MQ                     +KPNS T  TVL   
Sbjct: 460 NTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGC 519

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
           A    +    ++H   +K       +V +AL+ MY K   +  +R VF+ M  R+ ITWN
Sbjct: 520 AALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWN 579

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAG--AELTRSTFVSVIKLCATTKELRLARQ----LH 303
            ++  Y  +    EA + F  M   G      R   V+ I + A+     +  +     +
Sbjct: 580 VLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFY 639

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMISG 356
           +   K+GI+   +    L+    + G++E+A  +  +M   MK V +W++++  
Sbjct: 640 TMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGA 693


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 288/793 (36%), Positives = 440/793 (55%), Gaps = 43/793 (5%)

Query: 80  TLSSVLKTCGCL--FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
           TL    ++CG L       GRQVH    K G   D  V  SLV +Y R   VED  +VF 
Sbjct: 68  TLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFG 127

Query: 138 DMNES--NVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGI 194
            + ++  N+VSW +L++  + +    R LELF    V  G   +  T  TVL + A  G 
Sbjct: 128 GIPDAARNIVSWNALMAALSGDPR--RGLELFRDCLVAVGGMVDEATLVTVLPMCAALGW 185

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
             T   VH +  K+G +    V NAL+ MY K   + DA   F   E    ++WN M+  
Sbjct: 186 SETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFP--EAPSVVSWNVMLGA 243

Query: 255 YVTNELHMEAFETFNNMGL---AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           Y  N     AF    +M +           T +SV+  C+   EL   R+LH+  ++ G+
Sbjct: 244 YTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGL 303

Query: 312 DFDHN-IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           D   + +   L+ AY +CG++  A ++F+ +R  K V SW  +IS H Q      A+  F
Sbjct: 304 DAASDKVPNALVAAYGRCGRLLHADRVFTDIRR-KTVSSWNTLISAHAQQNTA-AAIELF 361

Query: 371 CQMTRE-GVRPNGFTYSIILTAQPAVSPFQV------HAHIIKTNYEKSFSVGTALLNAY 423
            QMT   G++P+GF+   +L A     P  +      H  I++   E+   +  +LL+AY
Sbjct: 362 IQMTNACGLKPDGFSIGSLLMA--CADPKHLLHVKATHGFILRNGLERDTVIRASLLSAY 419

Query: 424 VKKGILDEAAKV-FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFT 481
           ++    +  A+V F+ ++EK  V W AM++GY+Q G    +++++R++ S EG   +  +
Sbjct: 420 IRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVIS 479

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
            +S + AC+  S+ V  GK+ H  ++KA L +   +SS+L+ MYSK G +E A   F R 
Sbjct: 480 ATSALMACSELSS-VRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRL 538

Query: 542 RKRDL-VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
           + RD  VSW +MI GYA +G  ++A+E++ +MRR+ +E D  T++G++ AC HAG+++EG
Sbjct: 539 KARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEG 598

Query: 601 QQYFDIMVNEHH-IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
            ++FD M N HH I   +EHYSC++ + SRAG    A+ ++  MP    A +  +VL+AC
Sbjct: 599 LRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSAC 658

Query: 660 --------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
                         RL+ L+P  +  YVL SNMYA +  W +  +VRK++ D  + KE G
Sbjct: 659 HIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPG 718

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            SWI+V  K YSF+AG+  HP+  Q+      L  R+++ GY PDT+ VL ++++E K  
Sbjct: 719 CSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVE 778

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
            L  HSE+ A+ FGL+ T   A +++ KN+R+C DCH   +LISK+  RDIVVRD  RFH
Sbjct: 779 ALWWHSEKQAVTFGLLRTATPATVRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFH 838

Query: 826 HFKEGLCSCGDYW 838
           HF+ G+CSCGDYW
Sbjct: 839 HFRGGICSCGDYW 851


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/692 (37%), Positives = 396/692 (57%), Gaps = 38/692 (5%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG---GEVVTSVCNALISMYLKSKMVR 231
           ++P+SFTF  +  V A  G  A+A Q+H   ++ G     V  S   +L+  YL+   V 
Sbjct: 65  LRPDSFTFPPL--VRAAPG-PASAAQLHACALRLGLLHPNVFAS--GSLVHAYLRFGRVA 119

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM---GLAGAELTRSTFVSVIK 288
           +A  VFD M +RD   WN+M++G   N    +A      M   G+AG  +T S   SV+ 
Sbjct: 120 EAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLS---SVLP 176

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           +C    +  LA  +H   +K+G+  +  +   L+  Y K G + +A  +F  M  ++D+V
Sbjct: 177 MCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGM-ALRDLV 235

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SIILTAQPAVSPFQVHAHI 404
           +W ++IS + Q G +  AV  F  M   GV P+  T     S +      +    VH ++
Sbjct: 236 TWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYV 295

Query: 405 IKTNYE-KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
            +  ++      G A+++ Y K   +D A KVF+ + ++D+V+W+ ++ GY Q G    A
Sbjct: 296 RRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEA 355

Query: 464 VKIYRQL-TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           ++IY  +   EG+KP + TF SV+ A +     ++QG + HA SIK  LN  + V++ L+
Sbjct: 356 IRIYNDMHNHEGLKPIQGTFVSVLPAYSY-LGGLQQGMRMHALSIKTGLNLDVYVTTCLI 414

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            +Y+K G +  A  +F+   +R    WN++I G   HGH  KAL +F +M++++++ D +
Sbjct: 415 DLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHV 474

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           TF+ ++ AC+HAGLVD+G+ +FD+M   + I P  +HY+CMVD+  RAG L++A + I  
Sbjct: 475 TFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQS 534

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MP    + VW  +L ACR              L  L P +   YVL+SNMYA  G W   
Sbjct: 535 MPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGV 594

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS--HPQSNQIYSKLEELSTRLKDAG 746
             VR L+  + ++K  G+S +EVK     F +G  +  HPQ  +I   L +L  ++K AG
Sbjct: 595 DAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAG 654

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PD S+VLQD++++ KE IL+ HSERLAIAFG++ TP G PL I KNLRVCGDCH+  K
Sbjct: 655 YVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATK 714

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ISK+  R+I+VRD NRFHHFK+G CSCGD+W
Sbjct: 715 YISKITEREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 244/529 (46%), Gaps = 47/529 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P+R+   +N +L   CR++   +A+ L   +   G+     TLSSVL  C  L D
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                 +H   VK G + ++ V  +L+D+Y +   + +   VF  M   ++V+W S++S 
Sbjct: 184 RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA 243

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
             +       +ELFH M   G+ P+  T  ++   +A  G    A  VH  V + G +V 
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVG 303

Query: 214 TSVC-NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM- 271
             +  NA++ MY K   +  A+ VFD + DRD ++WN+++ GY+ N L  EA   +N+M 
Sbjct: 304 DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMH 363

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +  + TFVSV+   +    L+   ++H+  +K G++ D  + T L+  Y+KCGK+
Sbjct: 364 NHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKL 423

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A  +F  M   +    W A+I+G   +G    A++ F QM +E ++P+  T+      
Sbjct: 424 VEAMFLFEHMPR-RSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTF------ 476

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE-KDIVA---- 446
                                     +LL A    G++D+    F+L+     IV     
Sbjct: 477 -------------------------VSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKH 511

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           ++ M+    + G  + A +  + +    +KP+   + +++ AC      VE GK      
Sbjct: 512 YTCMVDMLGRAGQLDEAFEFIQSMP---IKPDSAVWGALLGACRI-HGNVEMGKVASQNL 567

Query: 507 IKAKLNNALCVSSALVTMYSKKG---NIESASEVFKRQRKRDLVSWNSM 552
            +    N +     +  MY+K G    +++   + +RQ  +    W+SM
Sbjct: 568 FELDPEN-VGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSM 615



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 1/165 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVLKTCGC 90
           Q +FD  P R+ V +N L+  Y ++ L  EA+ ++  +    GL     T  SVL     
Sbjct: 325 QKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSY 384

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L     G ++H   +K+G   DV V+T L+DLY +   + +   +F+ M   +   W ++
Sbjct: 385 LGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAI 444

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           ++G   +    + L LF +MQ E IKP+  TF ++L   +  G+V
Sbjct: 445 IAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLV 489


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 283/830 (34%), Positives = 442/830 (53%), Gaps = 83/830 (10%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM--N 140
           + LK C  L      + +H + +  G     +++T+L+  Y+ +N+      + + +  +
Sbjct: 166 TALKECNSL---AHAKLLHQQSIMQGLL--FHLATNLIGTYIASNSTAYAILLLERLPPS 220

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
            S+V  W  L+           V  L+ +M+  G  P+ +TF  V    A+   ++    
Sbjct: 221 PSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGAS 280

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR---DSITWNSMVAGYVT 257
           +H  V ++G      VCNA++SMY K   +R A  +FD +  R   D ++WNS+V+ Y+ 
Sbjct: 281 LHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMW 340

Query: 258 NELHMEAFETFNNMG---LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
                 A   F+ M    L   ++   + V+++  CA+       RQ+H   +++G+  D
Sbjct: 341 ASDANTALALFHKMTTRHLMSPDVI--SLVNILPACASLAASLRGRQVHGFSIRSGLVDD 398

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             +   ++  Y+KCGKME+A+K+F  M+  KDVVSW AM++G+ Q G ++ A++ F +MT
Sbjct: 399 VFVGNAVVDMYAKCGKMEEANKVFQRMK-FKDVVSWNAMVTGYSQAGRLEHALSLFERMT 457

Query: 375 RE-----------------------------------GVRPNGFTYSIILTAQPAVSPF- 398
            E                                   G RPN  T   +L+A  +V    
Sbjct: 458 EENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALL 517

Query: 399 ---QVHAHIIK--TNYE------KSFSVGTALLNAYVKKGILDEAAKVFELIDEKD--IV 445
              + H + IK   N +          V   L++ Y K    + A K+F+ +  KD  +V
Sbjct: 518 HGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVV 577

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQL--TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            W+ M+ GYAQ GD   A++++  +    + +KPN+FT S  + AC A  AA+  G+Q H
Sbjct: 578 TWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVAC-ARLAALRFGRQVH 636

Query: 504 ACSIKAKLNNA-LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           A  ++    +  L V++ L+ MYSK G++++A  VF    +R+ VSW S++ GY  HG  
Sbjct: 637 AYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRG 696

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           + AL VF EMR+  L  DGITF+ V+ AC+H+G+VD G  +F+ M  +  + P  EHY+C
Sbjct: 697 EDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYAC 756

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHD 668
           MVDL+ RAG L +AM +IN MP   +  VW  +L+ACRL              + L+  +
Sbjct: 757 MVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGN 816

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
              Y LLSN+YA    W++ AR+R  M    +KK  G SWI+ +    +F  GD SHPQS
Sbjct: 817 DGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQS 876

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            QIY  L +L  R+K  GY P TS+ L D+DDE K  +L +HSE+LA+A+G++     AP
Sbjct: 877 QQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAP 936

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++I KNLR+CGDCH+ I  ISK+   +I++RD++RFHHFK G CSC  YW
Sbjct: 937 IRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 239/524 (45%), Gaps = 65/524 (12%)

Query: 38  SPQRNFVEYNRLLFEYCRDSLH----QEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           SP   F  +N+L+    R +LH    ++   L+  ++ LG      T   V K C  L  
Sbjct: 220 SPSSVF-WWNQLI----RRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSS 274

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE---SNVVSWTSL 150
              G  +H    +SGFA +V V  ++V +Y +   +     +FDD+      ++VSW S+
Sbjct: 275 LSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSV 334

Query: 151 LSGYARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +S Y      +  L LFH+M    +  P+  +   +L   A         QVH   I++G
Sbjct: 335 VSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSG 394

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY-----VTNELHM-- 262
                 V NA++ MY K   + +A  VF  M+ +D ++WN+MV GY     + + L +  
Sbjct: 395 LVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFE 454

Query: 263 ----------------------------EAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
                                       EA + F  M   G+     T VS++  C +  
Sbjct: 455 RMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVG 514

Query: 295 ELRLARQLHSQVLKNGIDFDH--------NIRTGLMVAYSKCGKMEDASKIF-SMMREMK 345
            L   ++ H   +K  ++ D          +  GL+  Y+KC   E A K+F S+  + +
Sbjct: 515 ALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDR 574

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTR--EGVRPNGFTYSIILTAQPAVSPF----Q 399
           DVV+WT MI G+ Q+G  + A+  F  M +  + ++PN FT S  L A   ++      Q
Sbjct: 575 DVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQ 634

Query: 400 VHAHIIKTNYEK-SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           VHA++++  Y      V   L++ Y K G +D A  VF+ + +++ V+W++++ GY   G
Sbjct: 635 VHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHG 694

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
             E A++++ ++    + P+  TF  V+ AC+  S  V+ G  F
Sbjct: 695 RGEDALRVFDEMRKVPLVPDGITFLVVLYACSH-SGMVDHGINF 737



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 169/335 (50%), Gaps = 15/335 (4%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           ++ +K C     L  A+ LH Q +  G+ F  ++ T L+  Y        A  +   +  
Sbjct: 165 ITALKEC---NSLAHAKLLHQQSIMQGLLF--HLATNLIGTYIASNSTAYAILLLERLPP 219

Query: 344 M-KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPF 398
               V  W  +I   L  G+       + QM   G  P+ +T+  +  A           
Sbjct: 220 SPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGA 279

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK---DIVAWSAMLAGYA 455
            +HA + ++ +  +  V  A+++ Y K G L  A  +F+ +  +   D+V+W+++++ Y 
Sbjct: 280 SLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYM 339

Query: 456 QIGDTEGAVKIYRQLTSEGV-KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
              D   A+ ++ ++T+  +  P+  +  +++ AC + +A++ +G+Q H  SI++ L + 
Sbjct: 340 WASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASL-RGRQVHGFSIRSGLVDD 398

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + V +A+V MY+K G +E A++VF+R + +D+VSWN+M+ GY+Q G  + AL +F+ M  
Sbjct: 399 VFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTE 458

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           +++E D +T+  VIT     G   E    F  M +
Sbjct: 459 ENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCD 493



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 166/353 (47%), Gaps = 40/353 (11%)

Query: 33  SLFDRSPQRNF----VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           SLF+R  + N     V +  ++  Y +     EAL++F  +   G      TL S+L  C
Sbjct: 451 SLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSAC 510

Query: 89  GCLFDHVFGRQVHCECVK--------SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
             +   + G++ HC  +K           A D+ V   L+D+Y +  + E  R++FD ++
Sbjct: 511 VSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVS 570

Query: 141 --ESNVVSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGIVA 196
             + +VV+WT ++ GYA++   +  L+LF  M    + IKPN FT S  L   A    + 
Sbjct: 571 PKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALR 630

Query: 197 TAVQVHTMVIKN-GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
              QVH  V++N  G V+  V N LI MY KS  V  A+ VFD M  R++++W S++ GY
Sbjct: 631 FGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGY 690

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-- 313
             +    +A   F+ M          TF+ V+  C+           HS ++ +GI+F  
Sbjct: 691 GMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACS-----------HSGMVDHGINFFN 739

Query: 314 ----DHNIRTG------LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
               D  +  G      ++  + + G++ +A K+ + M      V W A++S 
Sbjct: 740 RMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 5/184 (2%)

Query: 32  QSLFDR-SPQ-RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLKT 87
           + +FD  SP+ R+ V +  ++  Y +      AL LF G+ ++   +  +  TLS  L  
Sbjct: 563 RKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVA 622

Query: 88  CGCLFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
           C  L    FGRQVH   +++ +    + V+  L+D+Y ++ +V+  + VFD+M + N VS
Sbjct: 623 CARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVS 682

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WTSL++GY  +   +  L +F  M+   + P+  TF  VL   +  G+V   +     + 
Sbjct: 683 WTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMS 742

Query: 207 KNGG 210
           K+ G
Sbjct: 743 KDFG 746


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/732 (34%), Positives = 422/732 (57%), Gaps = 30/732 (4%)

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADE 192
           R+ D+M   N VS+  L+S Y+R  +  R LE F R +   G++ + FT++  L   +  
Sbjct: 57  RLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRA 116

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             + T   VH M + +G      + N+L SMY     + +AR VFD  E+ D ++WNS++
Sbjct: 117 LDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLL 176

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL--RLARQLHSQVLKNG 310
           +GYV      E  + F+ M   G         S+IK CA+  ++   +A  +H  V+K G
Sbjct: 177 SGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAG 236

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI------D 364
           +D D  + + ++  Y+K G + +A  +F  + +  +V+ + AMI+G  ++ A        
Sbjct: 237 LDADLFLASAMIDMYAKRGALTNAVALFKSVPD-PNVIVFNAMIAGFCRDEAAVGKEVSR 295

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALL 420
            A++ + +M   G++P+ FT+S IL A      F    Q+H  ++K ++     +G+AL+
Sbjct: 296 EALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALI 355

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + Y   G +++  + F  + ++DIV W++M++G  Q    E A++++++    G+KP+ F
Sbjct: 356 DLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLF 415

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T SSV+NAC A  A    G+Q    +IK   N    + ++ + M ++ G++++ +  F+ 
Sbjct: 416 TMSSVMNAC-ASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQE 474

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              RD+VSW+++I  +AQHG  + AL +F EM    +  + +TF+ V+TAC+H GLVD+G
Sbjct: 475 MESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDG 534

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            +Y++IM NE+ + PT++H +C+VDL  RAG L  A   I    F   A VWR++LA+CR
Sbjct: 535 LRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCR 594

Query: 661 --------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                         ++ L+P  SA YV+L NMY   G     ++ R LM +R VKKE G 
Sbjct: 595 IHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGL 654

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SWIE+++  +SF+AGD SHP+SN IY KL E+ ++++      D +    D     ++ +
Sbjct: 655 SWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLA-NTDNASTGSDGISSSEQNL 713

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           +  HSE++A+AFG++  P  AP++++KNLRVC DCH+ +KLIS  E R+I++RD  RFHH
Sbjct: 714 VGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHH 773

Query: 827 FKEGLCSCGDYW 838
           F+ G CSCGDYW
Sbjct: 774 FRGGSCSCGDYW 785



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 169/575 (29%), Positives = 283/575 (49%), Gaps = 32/575 (5%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLS 82
           +P ++ +   L D  P+RN V YN L+  Y R  L   AL  F   R   GL +   T +
Sbjct: 51  APLHAAR---LIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYA 107

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           + L  C    D   G+ VH   V  G    V +S SL  +Y     + + RRVFD   E 
Sbjct: 108 AALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEH 167

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA--TAVQ 200
           + VSW SLLSGY R    +  L++F  M   G+  NSF   +++   A    V    A  
Sbjct: 168 DDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEA 227

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY----- 255
           VH  V+K G +    + +A+I MY K   + +A A+F  + D + I +N+M+AG+     
Sbjct: 228 VHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEA 287

Query: 256 -VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
            V  E+  EA   ++ M   G + +  TF S+++ C    E    +Q+H QVLK+    D
Sbjct: 288 AVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDD 347

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             I + L+  YS  G MED  + F  + + +D+V+WT+MISG +QN   + A+  F +  
Sbjct: 348 DYIGSALIDLYSDSGCMEDGYRCFRSLPK-QDIVTWTSMISGCVQNELFEKALRLFQESI 406

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
             G++P+ FT S ++ A  +++      Q+    IK  + +  ++G + ++   + G +D
Sbjct: 407 CYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVD 466

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
              + F+ ++ +D+V+WSA+++ +AQ G    A++I+ ++ +  V PNE TF +V+ AC+
Sbjct: 467 AVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACS 526

Query: 491 APSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK-- 543
                V+ G +++        +   + +  CV    V +  + G +  A E F R     
Sbjct: 527 -HGGLVDDGLRYYEIMKNEYGLSPTIKHVTCV----VDLLGRAGRLADA-EAFIRDSAFH 580

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
            D V W S++     HG  ++   V  ++   DLE
Sbjct: 581 DDAVVWRSLLASCRIHGDMERGQLVADQI--MDLE 613


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/747 (34%), Positives = 420/747 (56%), Gaps = 35/747 (4%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +L+  Y R       RR+ D+M   N VS+  L+  Y+R  +    LE   R +  G+  
Sbjct: 48  TLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDV 107

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           + F+++  L   +  G +     VH + I +G      V N+L+SMY K   + +AR VF
Sbjct: 108 DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF 167

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-- 295
           D  E+RD ++WNS+V+GYV      E    F  M   G  L      SVIK C+   +  
Sbjct: 168 DVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGT 227

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           + +A  +H  V+K G+D D  + + ++  Y+K G + +A+ +F  ++E  +VV +  MI+
Sbjct: 228 MDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQE-PNVVMFNTMIA 286

Query: 356 GHLQNGAI------DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           G  +   +        A+  + ++   G++P  FT+S +L A           Q+H  +I
Sbjct: 287 GFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVI 346

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K  +++   +G+AL++ Y   G +++  + F    + DIV W+AM++G  Q    E A+ 
Sbjct: 347 KYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALS 406

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++ +    G+KP+ FT SSV+NAC A  A    G+Q    + K+  +    + ++ V MY
Sbjct: 407 LFHESLGAGLKPDLFTISSVMNAC-ASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMY 465

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           ++ G++++A+  F+     D+VSW+++I  +AQHG  + AL  F EM    +  + ITF+
Sbjct: 466 ARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFL 525

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
           GV+TAC+H GLVDEG +Y++ M  ++ + PT++H +C+VDL  RAG L  A   I+   F
Sbjct: 526 GVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIF 585

Query: 646 AASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARV 691
            A   +WR++LA+C              R++ L+P  SA YV+L NMY   G     ++ 
Sbjct: 586 HADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKT 645

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           R LM  R VKKE G SWIE+K   +SF+AGD SHP+S+ IY+KLEE+ +R++      DT
Sbjct: 646 RDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLA-TTDT 704

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
                    + ++ +++ HSE+LA+A G++  P  AP++++KNLRVC DCH+ +KLISK 
Sbjct: 705 EI------SKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISKS 758

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           E R+I++RD  RFHHF++G CSC DYW
Sbjct: 759 ENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 271/546 (49%), Gaps = 19/546 (3%)

Query: 22  LRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           L  P  +++   L D  P+RN V +N L+  Y R+ L   +L      RR G+ +   + 
Sbjct: 56  LGGPLPARR---LLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSY 112

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           ++ L  C        GR VH   +  G +  V VS SLV +Y +   + + RRVFD   E
Sbjct: 113 AAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEE 172

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA--DEGIVATAV 199
            + VSW SL+SGY R    + ++ +F  M+  G+  NSF   +V+   +   +G +  A 
Sbjct: 173 RDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAE 232

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY---- 255
            VH  VIK G +    + +A+I MY K   + +A A+F  +++ + + +N+M+AG+    
Sbjct: 233 AVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTE 292

Query: 256 --VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
             +  E+  EA   ++ +   G + T  TF SV++ C     L   +Q+H QV+K     
Sbjct: 293 TVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQE 352

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  I + L+  Y   G MED  + F    +  D+V+WTAM+SG +QN   + A++ F + 
Sbjct: 353 DDFIGSALIDLYFNSGCMEDGFRCFRSSPK-HDIVTWTAMVSGCVQNELHEKALSLFHES 411

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
              G++P+ FT S ++ A  +++      Q+     K+ +++   +G + ++ Y + G +
Sbjct: 412 LGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDV 471

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           D A + F+ ++  D+V+WSA+++ +AQ G    A+  + ++    V PNE TF  V+ AC
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR--KRDLV 547
           +      E  + +   +    L+  +   + +V +  + G +  A E F        D V
Sbjct: 532 SHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADA-EAFISNGIFHADPV 590

Query: 548 SWNSMI 553
            W S++
Sbjct: 591 IWRSLL 596



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 212/431 (49%), Gaps = 15/431 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N L++ Y +      AR + D M  R+++++N ++  Y    L   + ET      AG +
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           + R ++ + +  C+    LR  R +H+  + +G+     +   L+  YSKCG+M +A ++
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS- 396
           F +  E +D VSW +++SG+++ GA +  V  F  M R G+  N F    ++        
Sbjct: 167 FDVAEE-RDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGD 225

Query: 397 -----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                   VH  +IK   +    + +A+++ Y KKG L EAA +F  + E ++V ++ M+
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMI 285

Query: 452 AGYAQIGDTEG------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           AG+ +     G      A+ +Y ++ S G++P EFTFSSV+ AC   +  +E GKQ H  
Sbjct: 286 AGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNL-AGYLEFGKQIHGQ 344

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            IK        + SAL+ +Y   G +E     F+   K D+V+W +M+ G  Q+   +KA
Sbjct: 345 VIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKA 404

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L +F E     L+ D  T   V+ AC    +   G+Q             T+   SC V 
Sbjct: 405 LSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSC-VH 463

Query: 626 LYSRAGMLEKA 636
           +Y+R+G ++ A
Sbjct: 464 MYARSGDVDAA 474



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 163/352 (46%), Gaps = 34/352 (9%)

Query: 27  YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCR------DSLHQEALNLFLGIRRLGLP 75
           Y+KK       +LF    + N V +N ++  +CR        +  EAL L+  ++  G+ 
Sbjct: 257 YAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQ 316

Query: 76  LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV 135
               T SSVL+ C       FG+Q+H + +K  F  D  + ++L+DLY  +  +EDG R 
Sbjct: 317 PTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRC 376

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           F    + ++V+WT+++SG  +N+++++ L LFH     G+KP+ FT S+V+   A   + 
Sbjct: 377 FRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVA 436

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
               Q+     K+G +  T + N+ + MY +S  V  A   F  ME  D ++W+++++ +
Sbjct: 437 RAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCH 496

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-- 313
             +    +A   F+ M  A       TF+ V+  C+           H  ++  G+ +  
Sbjct: 497 AQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACS-----------HGGLVDEGLRYYE 545

Query: 314 DHNIRTGLMVAYSKC----------GKMEDASKIFSMMREMKDVVSWTAMIS 355
             N   GL      C          G++ DA    S      D V W ++++
Sbjct: 546 TMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLA 597


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/656 (39%), Positives = 383/656 (58%), Gaps = 24/656 (3%)

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
           +V+       T + N LI+MY     +  A  +F  M  R++++W ++V+G   N +H +
Sbjct: 46  LVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHAD 105

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   F  M  AG   TR    S  +  A         QLH   ++ G D +  + + L  
Sbjct: 106 ALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLAD 165

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNG 382
            YSKCG + +A ++F  M + KD V+WTAMI G+ +NG+++ AV  F  M REG V  + 
Sbjct: 166 MYSKCGLLSEACRVFDQMPQ-KDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQ 224

Query: 383 FTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
             +  +L+A   +        +H  + K  +E   +V  AL++ Y K   ++ A++V + 
Sbjct: 225 HVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK- 283

Query: 439 IDEK--DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           ID    ++V+ ++M+ GY +    E A+ IY +L  +GV+PNEFTFSS+I  C A  A +
Sbjct: 284 IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGC-AMQALL 342

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           EQG Q HA  IK  L     V S LV MY K G I  + ++F     R  ++WN++I  +
Sbjct: 343 EQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVF 402

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           AQHGH ++A++ F  M    +  + I F+ ++TAC+HAGLVDEG +YF  M   H I P 
Sbjct: 403 AQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPK 462

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LI 662
            EHYSC++D Y RAG L++A   I+ MP   +A  W ++L ACR              L+
Sbjct: 463 EEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLM 522

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            L+P ++ I+V LS +YA+ G W++   VRKLM D ++KK  G+SW++   KT+ F + D
Sbjct: 523 KLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSED 582

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
            SHPQ   IY KLEEL+TR+K+ GY PDTS++  +++D  KE IL  HSER+A+AF L++
Sbjct: 583 WSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALIS 642

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            PA  P+ + KNLR+C DCHT  K I K+ERRDI+VRD +RFHHF  G CSCGDYW
Sbjct: 643 MPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 245/486 (50%), Gaps = 19/486 (3%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           L+S+L++CG   D   GR +H   V SG A     ++  L+ +Y    ++    R+F  M
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              N VSWT+L+SG ++N M+   L  F  M+  G+ P  F  S+     A  G      
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H + ++ G +    V + L  MY K  ++ +A  VFD M  +D++ W +M+ GY  N 
Sbjct: 143 QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202

Query: 260 LHMEAFETFNNM---GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
               A  +F +M   GL GA+  +  F SV+      K+  L++ +H  V K G + +  
Sbjct: 203 SLEAAVLSFRDMKREGLVGAD--QHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 260

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +R  L+  Y+K   +E AS++  +     +VVS T+MI G+++   ++ A+  + ++ R+
Sbjct: 261 VRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 320

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           GV PN FT+S ++      +      Q+HA +IKT+  +   VG+ L++ Y K G++  +
Sbjct: 321 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 380

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            ++F  I+ +  +AW+A++  +AQ G    A++ + ++   G++PN   F S++ AC+  
Sbjct: 381 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHA 440

Query: 493 SAAVEQGKQFH----ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLV 547
               E  K F+    A  I+ K  +  C+    +  Y + G ++ A +       K +  
Sbjct: 441 GLVDEGLKYFYSMKEAHGIEPKEEHYSCI----IDTYGRAGRLDEAYKFISEMPIKPNAY 496

Query: 548 SWNSMI 553
            W S++
Sbjct: 497 GWCSLL 502



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 216/450 (48%), Gaps = 37/450 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF   P+RN V +  L+    ++ +H +AL  F  +RR G+      LSS  +    L  
Sbjct: 78  LFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGA 137

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G Q+HC  V+ GF  ++ V+++L D+Y +   + +  RVFD M + + V+WT+++ G
Sbjct: 138 PLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDG 197

Query: 154 YARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNG 209
           YA+N   +  +  F  M+ EG +  +   F +VL   G L D  +  +   +H  V K G
Sbjct: 198 YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKS---IHCCVTKAG 254

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN-----SMVAGYVTNELHMEA 264
            E+  +V NALI MY KS  V  A  V       D   WN     SM+ GY+  +   EA
Sbjct: 255 FELEVAVRNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEA 310

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              +  +   G E    TF S+IK CA    L    QLH+QV+K  +  D  + + L+  
Sbjct: 311 LVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDM 370

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KCG +  + ++F+ + E +  ++W A+I+   Q+G    A+  F +M   G+RPN   
Sbjct: 371 YGKCGLISLSMQLFNEI-EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIA 429

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------------LLNAYVKKGILDEA 432
           +  +LTA         HA ++    +  +S+  A            +++ Y + G LDEA
Sbjct: 430 FVSLLTACS-------HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEA 482

Query: 433 AK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
            K + E+  + +   W ++L      G  E
Sbjct: 483 YKFISEMPIKPNAYGWCSLLGACRMRGSKE 512


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/618 (40%), Positives = 364/618 (58%), Gaps = 21/618 (3%)

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  R+ ++W +M++G   N    EA  TF  M + G   T+  F S I+ CA+   + + 
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +Q+H   LK GI  +  + + L   YSKCG M DA K+F  M   KD VSWTAMI G+ +
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM-PCKDEVSWTAMIDGYSK 119

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSV 415
            G  + A+  F +M  E V  +       L A  A+   +    VH+ ++K  +E    V
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 179

Query: 416 GTALLNAYVKKGILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           G AL + Y K G ++ A+ VF +  E +++V+++ ++ GY +    E  + ++ +L  +G
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           ++PNEFTFSS+I AC A  AA+EQG Q HA  +K   +    VSS LV MY K G +E A
Sbjct: 240 IEPNEFTFSSLIKAC-ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            + F        ++WNS++  + QHG  K A+++F+ M  + ++ + ITFI ++T C+HA
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           GLV+EG  YF  M   + + P  EHYSC++DL  RAG L++A + INRMPF  +A  W +
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCS 418

Query: 655 VLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
            L ACR              L+ L+P +S   VLLSN+YA    W++   VR  M D  V
Sbjct: 419 FLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNV 478

Query: 701 KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           KK  GYSW++V  KT+ F A D SHP+ + IY KL+ L  ++K AGY P T  V  D+DD
Sbjct: 479 KKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDD 538

Query: 761 EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 820
             KE +L +HSER+A+AF L++ P G P+ + KNLRVC DCH+ IK ISK+  R I+VRD
Sbjct: 539 SMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRD 598

Query: 821 TNRFHHFKEGLCSCGDYW 838
            +RFHHF +G CSCGDYW
Sbjct: 599 NSRFHHFTDGSCSCGDYW 616



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 215/427 (50%), Gaps = 5/427 (1%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M + N+VSWT+++SG ++N      +  F  M++ G  P  F FS+ +   A  G +   
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            Q+H + +K G      V + L  MY K   + DA  VF+ M  +D ++W +M+ GY   
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               EA   F  M      + +    S +  C   K  +  R +HS V+K G + D  + 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L   YSK G ME AS +F +  E ++VVS+T +I G+++   I+  ++ F ++ R+G+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 379 RPNGFTYSIILTA---QPAVSP-FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            PN FT+S ++ A   Q A+    Q+HA ++K N+++   V + L++ Y K G+L++A +
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
            F+ I +   +AW+++++ + Q G  + A+KI+ ++   GVKPN  TF S++  C+    
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
             E    F++      +       S ++ +  + G ++ A E   R   + +   W S +
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420

Query: 554 CGYAQHG 560
                HG
Sbjct: 421 GACRIHG 427



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 22/437 (5%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           PQRN V +  ++    ++S   EA+  F G+R  G        SS ++ C  L     G+
Sbjct: 2   PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 61

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+HC  +K G   ++ V ++L D+Y +   + D  +VF++M   + VSWT+++ GY++  
Sbjct: 62  QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 121

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
             +  L  F +M  E +  +     + LG             VH+ V+K G E    V N
Sbjct: 122 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 181

Query: 219 ALISMYLKSKMVRDARAVFD-GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           AL  MY K+  +  A  VF    E R+ +++  ++ GYV  E   +    F  +   G E
Sbjct: 182 ALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE 241

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               TF S+IK CA    L    QLH+QV+K   D D  + + L+  Y KCG +E A + 
Sbjct: 242 PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQA 301

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  + +  + ++W +++S   Q+G    A+  F +M   GV+PN  T+  +LT       
Sbjct: 302 FDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS---- 356

Query: 398 FQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDEAAKVFELID-EKDI 444
              HA +++   +  +S+             + +++   + G L EA +    +  E + 
Sbjct: 357 ---HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNA 413

Query: 445 VAWSAMLAGYAQIGDTE 461
             W + L      GD E
Sbjct: 414 FGWCSFLGACRIHGDKE 430


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/766 (34%), Positives = 431/766 (56%), Gaps = 32/766 (4%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           VH   V++  +  + +  +L+  Y R       RR+ D+M  +N VS+  L+  Y+R   
Sbjct: 36  VHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93

Query: 160 NDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
            +  LE F R +   G++ + FT++  L   +  G +     VH + +  G      V N
Sbjct: 94  PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSN 153

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +L+SMY +   +  AR VFD  ++RD ++WN++V+GYV      +    F  M  +G  L
Sbjct: 154 SLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGL 213

Query: 279 TRSTFVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                 SVIK CA + +  + +A  +H  V+K G D D  + + ++  Y+K G + +A  
Sbjct: 214 NSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVA 273

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGA------IDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +F  + +  +VV + AMI+G  ++ A      +  A++ + ++   G+ P  FT+S ++ 
Sbjct: 274 LFKSVLD-PNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIR 332

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A           Q+H  ++K  ++    +G+AL++ Y+  G +++  + F  + ++D+V 
Sbjct: 333 ACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVT 392

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM++G  Q    E A+ ++ +L   G+KP+ FT SSV+NAC A  A    G+Q    +
Sbjct: 393 WTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNAC-ASLAVARTGEQIQCFA 451

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            K+       + ++ + MY++ G++ +A   F+     D+VSW+++I  +AQHG  + AL
Sbjct: 452 TKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDAL 511

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             F EM    +  + ITF+GV+TAC+H GLVDEG +Y++ M  E+ + PT++H +C+VDL
Sbjct: 512 RFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDL 571

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
             RAG L  A   I    F     +WR++LA+C              R++ LQP  SA Y
Sbjct: 572 LGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASY 631

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           V L N+Y   G     +++R +M +R VKKE G SWIE+++  +SF+AGD SHP+SN IY
Sbjct: 632 VNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIY 691

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           SKL E+ +++ D     D S    D    ++++ ++ HSE+LA+A GL+  P  AP++++
Sbjct: 692 SKLAEMLSKI-DKLTATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQSAPIRVM 750

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLRVC DCH  +KLISK E+R+IV+RD  RFHHF++G CSC DYW
Sbjct: 751 KNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 279/564 (49%), Gaps = 27/564 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKTCGCLF 92
           L D  P+ N V +N L+  Y R    + +L  F   RR  G+     T ++ L  C    
Sbjct: 69  LLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAG 128

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+ VH   V  G A  V VS SLV +Y R  ++   R+VFD  +E + VSW +L+S
Sbjct: 129 RLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVS 188

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA--DEGIVATAVQVHTMVIKNGG 210
           GY R    D +L +F  M+  GI  NSF   +V+   A  D+ ++  A  VH  V+K G 
Sbjct: 189 GYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGF 248

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM------EA 264
           +    + +A++ MY K   + +A A+F  + D + + +N+M+AG   +E  +      EA
Sbjct: 249 DSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREA 308

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              ++ +   G E T  TF SVI+ C    ++   +Q+H QVLK+    D  I + L+  
Sbjct: 309 LSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDL 368

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y   G MED  + F+ + + +DVV+WTAMISG +QN   + A+  F ++   G++P+ FT
Sbjct: 369 YLNSGCMEDGFRCFTSVPK-QDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFT 427

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            S ++ A  +++      Q+     K+ + +  ++G + ++ Y + G +  A + F+ ++
Sbjct: 428 ISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEME 487

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             DIV+WSA+++ +AQ G    A++ + ++    V PNE TF  V+ AC+      E  K
Sbjct: 488 SHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLK 547

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR--KRDLVSWNSMICGYAQ 558
            +     +  L+  +   + +V +  + G +  A E F R      + V W S++     
Sbjct: 548 YYETMKEEYALSPTIKHCTCVVDLLGRAGRLADA-EAFIRDSIFHDEPVIWRSLL----- 601

Query: 559 HGHTKKALEVFKEMRRQDLEFDGI 582
                 +  + ++M R  L  D I
Sbjct: 602 -----ASCRIHRDMERGQLVADRI 620



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 183/368 (49%), Gaps = 9/368 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD + +R+ V +N L+  Y R     + L +F  +RR G+ L    L SV+K C   
Sbjct: 169 RQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGS 228

Query: 92  FDHV--FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            D V      VH   VK+GF  DV +++++V +Y +   + +   +F  + + NVV + +
Sbjct: 229 DDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNA 288

Query: 150 LLSGYARNKMN------DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +++G  R++           L L+  +Q  G++P  FTFS+V+      G +    Q+H 
Sbjct: 289 MIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHG 348

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            V+K+  +    + +ALI +YL S  + D    F  +  +D +TW +M++G V NEL   
Sbjct: 349 QVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFER 408

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   F+ +  AG +    T  SV+  CA+    R   Q+     K+G      +    + 
Sbjct: 409 ALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIH 468

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y++ G +  A + F  M E  D+VSW+A+IS H Q+G    A+ FF +M    V PN  
Sbjct: 469 MYARSGDVHAAVRRFQEM-ESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEI 527

Query: 384 TYSIILTA 391
           T+  +LTA
Sbjct: 528 TFLGVLTA 535



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 145/277 (52%), Gaps = 11/277 (3%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDS------LHQEALNLFLGIRRLGL 74
            Y+KK       +LF      N V +N ++   CRD       + +EAL+L+  ++  G+
Sbjct: 261 MYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGM 320

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR 134
                T SSV++ C    D  FG+Q+H + +K  F  D  + ++L+DLY+ +  +EDG R
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFR 380

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
            F  + + +VV+WT+++SG  +N++ +R L LFH +   G+KP+ FT S+V+   A   +
Sbjct: 381 CFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAV 440

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
             T  Q+     K+G    T++ N+ I MY +S  V  A   F  ME  D ++W+++++ 
Sbjct: 441 ARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISS 500

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +  +    +A   FN M  A       TF+ V+  C+
Sbjct: 501 HAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACS 537



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 147/319 (46%), Gaps = 12/319 (3%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F   P+++ V +  ++    ++ L + AL LF  +   GL     T+SSV+  C  L   
Sbjct: 382 FTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVA 441

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G Q+ C   KSGF R   +  S + +Y R+ +V    R F +M   ++VSW++++S +
Sbjct: 442 RTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSH 501

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGGEVV 213
           A++      L  F+ M    + PN  TF  VL   +  G+V   ++ + TM  +      
Sbjct: 502 AQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPT 561

Query: 214 TSVCNALISMYLKSKMVRDARA-VFDGMEDRDSITWNSMVAGYVTNELH--MEAFETFNN 270
              C  ++ +  ++  + DA A + D +   + + W S++A   +  +H  ME  +   +
Sbjct: 562 IKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLA---SCRIHRDMERGQLVAD 618

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-----IRTGLMVAY 325
             +     + +++V++  +     EL LA ++   + + G+  +       +R+G+    
Sbjct: 619 RIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFV 678

Query: 326 SKCGKMEDASKIFSMMREM 344
           +      +++ I+S + EM
Sbjct: 679 AGDKSHPESNAIYSKLAEM 697


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 251/747 (33%), Positives = 415/747 (55%), Gaps = 21/747 (2%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+ +    +V  Y+++ N+   R +F+ M   N VSWT ++ GY++N        L+  M
Sbjct: 75  RNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEM 134

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              G+KP+  TF+T+L    D   +   +Q+H+ +I+ G      V N+L+  Y K+  +
Sbjct: 135 CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL 194

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             A  +F  M  +DS+++N M+ GY       EA + F  M     + +  TF +++ + 
Sbjct: 195 DIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMS 254

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
             ++++   +Q+H   +K    +D  +   L+  YSK   ++ A  +F  M E+ D VS+
Sbjct: 255 VGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPEL-DGVSY 313

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
             +I+G+  NG  + + + F ++         F ++ +L+            Q HA  + 
Sbjct: 314 NIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVV 373

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           T       VG AL++ Y K    ++A ++F  +  ++ V W+A+++ Y Q G  E A+K+
Sbjct: 374 TTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKM 433

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           ++++  E V  ++ TF+S + A +A  A+V  GKQ H+  I+  L +++   S LV MY+
Sbjct: 434 FKEMNRENVHGDQATFASTLKA-SANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYA 492

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
             G+++ A EVFK    R++V WN++I  Y+Q+G  +     F +M    L  D ++F+ 
Sbjct: 493 NCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLS 552

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V+TAC+H GLV++   YF+ M   + + P  +HY+ M+D+  R+G   +A ++I+ MPF 
Sbjct: 553 VLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFE 612

Query: 647 ASATVWRTVLAACRLISLQP---------------HDSAIYVLLSNMYAATGHWQERARV 691
               +W +VL +CR+   Q                 D+A YV +SN+YA  G W+  A+V
Sbjct: 613 PDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKV 672

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           +K M +R VKK   YSW+E+ ++ + F A D +HPQ+ QI  K+  L   +   GYKPDT
Sbjct: 673 KKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDT 732

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           S  LQ++D+E K   L  HSERLAIAF L+ TP G+P+ I+KNLR C DCH  IK+ISK+
Sbjct: 733 SCTLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKI 792

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             R+I VRD++RFHHF++G CSCGDYW
Sbjct: 793 VGREITVRDSSRFHHFRDGSCSCGDYW 819



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/575 (24%), Positives = 279/575 (48%), Gaps = 14/575 (2%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + LF+    RN V +  ++  Y +++  +EA NL+  + R G+     T +++L    
Sbjct: 95  RARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSG-- 152

Query: 90  CLFDHVFGR----QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             FD         Q+H   ++ GF+  + V  SLVD Y +T  ++   ++F +M   + V
Sbjct: 153 --FDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSV 210

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           S+  +++GY +    +  L+LF +M+    +P+ FTF+ +LG+      V    Q+H + 
Sbjct: 211 SFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLA 270

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           IK        V NAL+  Y K   +  A+ +FD M + D +++N ++ GY  N  + ++F
Sbjct: 271 IKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSF 330

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           + F  +     +     F +++ + A    L + RQ H+Q +      +  +   L+  Y
Sbjct: 331 DLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMY 390

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           +KC K EDA++IF+ +   ++ V WTA+IS ++Q G  + A+  F +M RE V  +  T+
Sbjct: 391 AKCEKFEDANRIFANL-AYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATF 449

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           +  L A   ++      Q+H+ +I+     S   G+ L++ Y   G + +A +VF+ + +
Sbjct: 450 ASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPD 509

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           ++IV W+A+++ Y+Q GD E     +  +   G+ P+  +F SV+ AC+      +    
Sbjct: 510 RNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWY 569

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
           F++ +   KL+      + ++ +  + G    A  +      + D V W+S++     H 
Sbjct: 570 FNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHK 629

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           +   A +   ++ + D   D   ++ +      AG
Sbjct: 630 NQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAG 664



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 236/495 (47%), Gaps = 39/495 (7%)

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-- 256
           + V   ++K G +   S  N  +   +++  +  AR +FD M  R++ + N MV+GYV  
Sbjct: 31  IPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKS 90

Query: 257 -----------------------------TNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
                                         N    EAF  +  M  +G +    TF +++
Sbjct: 91  RNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLL 150

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
                T  L+   Q+HS +++ G      +   L+ +Y K   ++ AS++FS M   KD 
Sbjct: 151 SGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEM-PTKDS 209

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQPAVSPFQVHAH 403
           VS+  MI+G+ + G  + A+  F QM     +P+GFT++ +L     ++  +   Q+H  
Sbjct: 210 VSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGL 269

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
            IKT+Y     V  ALL+ Y K   +D A  +F+ + E D V+++ ++ GYA  G  E +
Sbjct: 270 AIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKS 329

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
             ++++L         F F++++ +  A    +  G+Q HA ++     + + V +ALV 
Sbjct: 330 FDLFKRLQGTSFDRKNFPFATML-SVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVD 388

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY+K    E A+ +F     R+ V W ++I  Y Q G  ++AL++FKEM R+++  D  T
Sbjct: 389 MYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQAT 448

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           F   + A  +   V  G+Q    ++    +  ++   S +VD+Y+  G ++ A+++   M
Sbjct: 449 FASTLKASANLASVSLGKQLHSSVI-RLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEM 507

Query: 644 PFAASATVWRTVLAA 658
           P   +   W  +++A
Sbjct: 508 P-DRNIVCWNALISA 521


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/746 (35%), Positives = 421/746 (56%), Gaps = 44/746 (5%)

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           +  +     ++FD M++SN+V++ SL+SGY +    D+V+ LF + +  G+K + +  + 
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
            L   +  G ++    +H +++  G      + N+LI MY K   V  AR +FD  +  D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE--LRLARQL 302
            ++WNS++AGYV N  + E       M   G      T  S +K C++           L
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H   +K G+  D  + T L+  Y+K G ++DA +IF  M + K+VV + AM++G LQ   
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVD-KNVVMYNAMMAGLLQQET 251

Query: 363 ID-----LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSF 413
           I+      A+N F +M   G++P+ FTYS +L A   V  F    QVHA + K       
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 311

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            +G+ L++ Y   G + +A   F  I    IV  +AM+ GY Q G+ E A+ ++ +L + 
Sbjct: 312 YIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTY 371

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
             KP+EF FS+++++C A    +  G+Q    + K  ++      ++ + MY+K G++ +
Sbjct: 372 EEKPDEFIFSTIMSSC-ANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYA 430

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A+  F++    D+VSW++MIC  AQHGH  +AL  F+ M+   +E +   F+GV+ AC+H
Sbjct: 431 ANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSH 490

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            GLV+EG +YFD M  ++ +   ++H  C+VDL  RAG L  A  +I R+ F     +WR
Sbjct: 491 RGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWR 550

Query: 654 TVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
            +L+ACR+              I L+P  SA YVLL N+Y   G+    ++VR LM +R+
Sbjct: 551 ALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERR 610

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL---STRLKDA----GYKPDTS 752
           +KKE G SWI++ +K YSF++GD SH  S QIY+KL+E+   + RL  A    GYK    
Sbjct: 611 IKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYK---- 666

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
                I+ EH   + + HSE+LA+AFG++     AP++++KNLR+C DCH  +KL S +E
Sbjct: 667 -----IEHEHLTNV-NYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVE 720

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +R+++VRD+ RFHHFK+G CSCGDYW
Sbjct: 721 KRELIVRDSVRFHHFKDGSCSCGDYW 746



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/556 (27%), Positives = 268/556 (48%), Gaps = 19/556 (3%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           ++    LFD+  + N V YN L+  Y + S   + + LF   RRLGL L     +  L  
Sbjct: 17  TRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTA 76

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C    +   G+ +H   +  G    V ++ SL+D+Y +   V+  R +FD  ++ + VSW
Sbjct: 77  CSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSW 136

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD--EGIVATAVQVHTMV 205
            SL++GY +N   + +L +  +M   G+  N++T  + L   +    G       +H   
Sbjct: 137 NSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 196

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE-----L 260
           IK G  +   V  AL+ MY K+  + DA  +FD M D++ + +N+M+AG +  E      
Sbjct: 197 IKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKC 256

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             +A   F  M   G + +  T+ S++K C   ++ + A+Q+H+ + KNG+  D  I + 
Sbjct: 257 AYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSI 316

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  YS  G M DA   F+ +  +  +V  TAMI G+LQNG  + A++ F ++     +P
Sbjct: 317 LIDLYSVLGSMMDALLCFNSIHNLT-IVPMTAMIFGYLQNGEFESALSLFYELLTYEEKP 375

Query: 381 NGFTYSIILTAQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + F +S I+++   +    S  Q+  H  K    +      + +  Y K G L  A   F
Sbjct: 376 DEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTF 435

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           + ++  DIV+WS M+   AQ G    A++ +  + S G++PN F F  V+ AC+     V
Sbjct: 436 QQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACS-HRGLV 494

Query: 497 EQGKQFHAC---SIKAKLNNALCVSSALVTMYSKKGNIESA-SEVFKRQRKRDLVSWNSM 552
           E+G ++        K KL+   CV   +V +  + G +  A S + +   + + V W ++
Sbjct: 495 EEGLRYFDTMEKDYKMKLHVKHCV--CVVDLLGRAGRLADAESLILRLGFEHEPVMWRAL 552

Query: 553 ICGYAQHGHTKKALEV 568
           +     H  T  A  V
Sbjct: 553 LSACRIHKDTVTAQRV 568


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/782 (34%), Positives = 426/782 (54%), Gaps = 44/782 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+    R+ V +  +L  Y ++ L +EAL L+  + R G+      LSSVL +C     
Sbjct: 99  VFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAEL 158

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR VH +  K GF  +  V  +L+ LY+R  +     RVF DM   + V++ +L+SG
Sbjct: 159 FAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISG 218

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +A+    +  LE+F  MQ  G+ P+  T S++L   A  G +    Q+H+ + K G    
Sbjct: 219 HAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSD 278

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +  +L+ +Y+K   V  A  +F+     + + WN ++  +       ++FE F  M  
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQT 338

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG    + T+  +++ C  T E+ L  Q+HS  +K G + D  +   L+  YSK G +E 
Sbjct: 339 AGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++  M++E KDVVSWT+MI+G++Q+     A+  F +M + G+ P+    +  ++   
Sbjct: 399 ARRVLEMLKE-KDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457

Query: 394 AVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +       Q+HA +  + Y    S+  AL+N Y + G + EA   FE I+ KD + W+ 
Sbjct: 458 GIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +++G+AQ G  E A+K++ ++   GVK N FTF S ++A +A  A ++QGKQ HA  IK 
Sbjct: 518 LVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSA-SANLAEIKQGKQIHARVIKT 576

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             +    V +AL+++Y K G+ E A   F    +R+ VSWN++I   +QHG   +AL+ F
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFF 636

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M++                        EG  YF  M +++ I P  +HY+C++D++ R
Sbjct: 637 DQMKK------------------------EGLSYFKSMSDKYGIRPRPDHYACVIDIFGR 672

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L++A   +  MP AA A VWRT+L+AC+              L+ L+PHDSA YVLL
Sbjct: 673 AGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLL 732

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN YA TG W  R +VRK+M DR V+KE G SWIEVKN  ++F  GD  HP + QIY+ L
Sbjct: 733 SNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFL 792

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
             ++ R+   GYK +  ++  D + E ++     HSE+LA+ FGL++ P   PL+++KNL
Sbjct: 793 AVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNL 852

Query: 796 RV 797
           RV
Sbjct: 853 RV 854



 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 170/565 (30%), Positives = 292/565 (51%), Gaps = 8/565 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H + +  G  +D  V   L+DLY +   V   RRVF++++  + VSW ++LSGYA+N 
Sbjct: 63  EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           + +  L L+ +M   G+ P  +  S+VL       + A    VH    K G    T V N
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI++YL+    R A  VF  M  RD++T+N++++G+        A E F  M  +G   
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T  S++  CA+  +L+   QLHS + K G+  D+ +   L+  Y KCG +E A  IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           ++     +VV W  ++    Q   +  +   FCQM   G+RPN FTY  IL         
Sbjct: 303 NLGNR-TNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEI 361

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+H+  +KT +E    V   L++ Y K G L++A +V E++ EKD+V+W++M+AGY
Sbjct: 362 DLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q    + A+  ++++   G+ P+    +S I+ C A   A+ QG Q HA    +  +  
Sbjct: 422 VQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGC-AGIKAMRQGLQIHARVYVSGYSGD 480

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + + +ALV +Y++ G I  A   F+    +D ++WN ++ G+AQ G  ++AL+VF  M +
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             ++ +  TF+  ++A  +   + +G+Q    ++   H + T E  + ++ LY + G  E
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFET-EVGNALISLYGKCGSFE 599

Query: 635 KAMDIINRMPFAASATVWRTVLAAC 659
            A    + M    +   W T++ +C
Sbjct: 600 DAKMEFSEMS-ERNEVSWNTIITSC 623



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/450 (31%), Positives = 236/450 (52%), Gaps = 9/450 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P R+ V +N L+  + + +  + AL +F  ++  GL     T+SS+L  C  L
Sbjct: 198 ERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASL 257

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G Q+H    K+G + D  +  SL+DLY++  +VE    +F+  N +NVV W  +L
Sbjct: 258 GDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLIL 317

Query: 152 SGYARNKMND--RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
             +   ++ND  +  ELF +MQ  GI+PN FT+  +L      G +    Q+H++ +K G
Sbjct: 318 VAFG--QINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTG 375

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    V   LI MY K   +  AR V + ++++D ++W SM+AGYV +E   +A   F 
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFK 435

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G         S I  CA  K +R   Q+H++V  +G   D +I   L+  Y++CG
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCG 495

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++ +A   F  + E KD ++W  ++SG  Q+G  + A+  F +M + GV+ N FT+   L
Sbjct: 496 RIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSAL 554

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +A   ++      Q+HA +IKT +     VG AL++ Y K G  ++A   F  + E++ V
Sbjct: 555 SASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV 614

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
           +W+ ++   +Q G    A+  + Q+  EG+
Sbjct: 615 SWNTIITSCSQHGRGLEALDFFDQMKKEGL 644



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 132/255 (51%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           + +K + + +   +++ V +  ++  Y +    ++AL  F  +++ G+      L+S + 
Sbjct: 395 WLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAIS 454

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  +     G Q+H     SG++ DV++  +LV+LY R   + +    F+++   + ++
Sbjct: 455 GCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEIT 514

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  L+SG+A++ +++  L++F RM   G+K N FTF + L   A+   +    Q+H  VI
Sbjct: 515 WNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVI 574

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G    T V NALIS+Y K     DA+  F  M +R+ ++WN+++     +   +EA +
Sbjct: 575 KTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALD 634

Query: 267 TFNNMGLAGAELTRS 281
            F+ M   G    +S
Sbjct: 635 FFDQMKKEGLSYFKS 649



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 13/211 (6%)

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           + WS  LAG+    D    + ++     +        F+  + AC       +   + HA
Sbjct: 9   LGWS--LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHA 66

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
            +I   L     V + L+ +YSK G +  A  VF+    RD VSW +M+ GYAQ+G  ++
Sbjct: 67  KAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEE 126

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG-----QQYFDIMVNEHHIYPTMEH 619
           AL ++++M R  +         V+++CT A L  +G     Q Y     +E  +      
Sbjct: 127 ALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFV------ 180

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
            + ++ LY R G    A  +   MP   + T
Sbjct: 181 GNALITLYLRCGSFRLAERVFYDMPHRDTVT 211


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/578 (41%), Positives = 363/578 (62%), Gaps = 21/578 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + S+I  CA +K L  AR +HS + ++ +  D  +   L+  Y KCG + DA  +F
Sbjct: 61  TPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVF 120

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             +   +DVVSWT +I+G+ QN     A+     M R   RP+GFT++  L A  A    
Sbjct: 121 DGI-PTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGR 179

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA  +K N ++   VG+ALL+ Y +   +D A +VF+ +D K+ V+W+A++AG+
Sbjct: 180 GIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGF 239

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ GD E  +  + ++   G     FT+SSV +A  A   A+EQG+  HA  IK+     
Sbjct: 240 ARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSAL-ARIGALEQGRWVHAHMIKSGQKLT 298

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V++ ++ MY+K G++  A +VF R  +RDLV+WN+M+  +AQ+G  K+A+  F+E+R+
Sbjct: 299 AFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRK 358

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             ++ + ITF+ V+TAC+H GLV EG+QYFD+M  ++++ P ++HY   VDL  RAG+L+
Sbjct: 359 YGIQLNQITFLSVLTACSHGGLVKEGKQYFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLK 417

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
           +A+  + +MP   +A VW  +L ACR+                L P D+   VLL N+YA
Sbjct: 418 EALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYA 477

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +TG W + ARVRK+M    VKKE   SW+E++N  + F+A D +HP+S +IY   EE++T
Sbjct: 478 STGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNT 537

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           R+K AGY P+T YVL  I ++ +E  L  HSE++A+AF L+  PAGA ++I+KN+R+CGD
Sbjct: 538 RIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGD 597

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH+  + +S++ +R+IVVRDTNRFHHF  G CSCGDYW
Sbjct: 598 CHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P R+ V +  L+  Y ++ +  EAL L   + R      G T +S LK  G    
Sbjct: 119 VFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGG 178

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H   VK     DV V ++L+D+Y R   ++   RVFD ++  N VSW +L++G
Sbjct: 179 RGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAG 238

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +AR    +  L  F  MQ  G     FT+S+V   LA  G +     VH  +IK+G ++ 
Sbjct: 239 FARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLT 298

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N ++ MY KS  + DAR VFD ++ RD +TWN+M+  +    L  EA   F  +  
Sbjct: 299 AFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRK 358

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQ 301
            G +L + TF+SV+  C+    ++  +Q
Sbjct: 359 YGIQLNQITFLSVLTACSHGGLVKEGKQ 386



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 183/396 (46%), Gaps = 12/396 (3%)

Query: 68  GIRRLGLPLFGS------TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           G+R L L L G          S++  C    +    R +H    +S  A D  +  SL+ 
Sbjct: 46  GLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIH 105

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +   V D R VFD +   +VVSWT L++GYA+N M    L L   M     +P+ FT
Sbjct: 106 MYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFT 165

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F++ L      G      Q+H + +K   +    V +AL+ MY + + +  A  VFD ++
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            ++ ++WN+++AG+            F  M   G   T  T+ SV    A    L   R 
Sbjct: 226 SKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRW 285

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H+ ++K+G      +   ++  Y+K G M DA K+F  + + +D+V+W  M++   Q G
Sbjct: 286 VHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRV-DQRDLVTWNTMLTAFAQYG 344

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKT-NYEKSFSVGT 417
               AV  F ++ + G++ N  T+  +LTA      V   + +  ++K  N E       
Sbjct: 345 LGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYV 404

Query: 418 ALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLA 452
           + ++   + G+L EA   VF++  E     W A+L 
Sbjct: 405 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLG 440



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 60/144 (41%), Gaps = 24/144 (16%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR  QR+ V +N +L  + +  L +EA+  F  IR+ G+ L   T  SVL  C   
Sbjct: 319 RKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACS-- 376

Query: 92  FDHVFGRQVHCECVKSG-----FARDVNVS------TSLVDLYMRTNNVEDGR-RVFDDM 139
                    H   VK G       +D NV        S VDL  R   +++    VF   
Sbjct: 377 ---------HGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 427

Query: 140 NESNVVSWTSLLSGYARNKMNDRV 163
            E     W +LL G  R   N ++
Sbjct: 428 MEPTAAVWGALL-GACRMHKNAKI 450


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 266/686 (38%), Positives = 388/686 (56%), Gaps = 30/686 (4%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P   TF+ +L + A    +AT   VH  +   G    +    AL +MY K +   DAR V
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRS-TFVSVIKLCATTK 294
           FD M  RD + WN++VAGY  N L   A E    M G  G E   S T VSV+  CA  +
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            L   R++H+  L+ G+D   N+ T ++ AY KCG +E A  +F  M  +++ VSW AMI
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCM-PVRNSVSWNAMI 192

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKT 407
            G+  NG    A+  F +M +EGV     T + +L A  A           +VH  +++ 
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGV---DVTDASVLAALQACGELGYLDEVRRVHELLVRV 249

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
               + SV  AL+  Y K    D AA+VF EL ++K  ++W+AM+ G+ Q    E A ++
Sbjct: 250 GLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERL 309

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + ++  E V+P+ FT  SVI A    S  + Q +  H  SI+ +L+  + V +AL+ MYS
Sbjct: 310 FARMQLENVRPDSFTLVSVIPAVADISDPL-QARWIHGYSIRHQLDQDVYVLTALIDMYS 368

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G +  A  +F   R R +++WN+MI GY  HG  + A+E+F+EM+      +  TF+ 
Sbjct: 369 KCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLS 428

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V+ AC+HAGLVDEGQ+YF  M  ++ + P MEHY  MVDL  RAG L++A   I  MP  
Sbjct: 429 VLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIE 488

Query: 647 ASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
              +V+  +L AC+L                L P +   +VLL+N+YA    W++ ARVR
Sbjct: 489 PGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVR 548

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
             M  + ++K  G+S I++KN+ ++F +G  +H  +  IY++L +L   +KD GY PDT 
Sbjct: 549 TAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTD 608

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
            +  D++D+ K  +L+ HSE+LAIA+GL+ T  G  +QI KNLRVC DCH   KLIS L 
Sbjct: 609 SI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLT 667

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R+I++RD  RFHHFK+G CSCGDYW
Sbjct: 668 GREIIMRDIQRFHHFKDGKCSCGDYW 693



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 240/466 (51%), Gaps = 6/466 (1%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T +++LK C    D   GR VH +    G A +   ST+L ++Y +     D RRVFD M
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGIVAT 197
              + V+W ++++GYARN +    +E   RMQ E  G +P+S T  +VL   AD   +  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             +VH   ++ G + + +V  A++  Y K   V  ARAVFD M  R+S++WN+M+ GY  
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           N    EA   F  M   G ++T ++ ++ ++ C     L   R++H  +++ G+  + ++
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              L+  Y+KC + + A+++F+ +   K  +SW AMI G  QN   + A   F +M  E 
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317

Query: 378 VRPNGFTYSIILTAQPAVS-PFQ---VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           VRP+ FT   ++ A   +S P Q   +H + I+   ++   V TAL++ Y K G +  A 
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIAR 377

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           ++F+   ++ ++ W+AM+ GY   G  + AV+++ ++   G  PNE TF SV+ AC+   
Sbjct: 378 RLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAG 437

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
              E  K F +      L   +     +V +  + G ++ A    K
Sbjct: 438 LVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIK 483



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 209/440 (47%), Gaps = 13/440 (2%)

Query: 23  RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR--RLGLPLFGST 80
           R P  +++   +FDR P R+ V +N ++  Y R+ L   A+   + ++    G      T
Sbjct: 65  RRPADARR---VFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVT 121

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L SVL  C         R+VH   +++G    VNVST+++D Y +   VE  R VFD M 
Sbjct: 122 LVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP 181

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             N VSW +++ GYA N      + LF RM  EG+     +    L    + G +    +
Sbjct: 182 VRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRR 241

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS-ITWNSMVAGYVTNE 259
           VH ++++ G     SV NALI+ Y K K    A  VF+ + ++ + I+WN+M+ G+  NE
Sbjct: 242 VHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNE 301

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A   F  M L        T VSVI   A   +   AR +H   +++ +D D  + T
Sbjct: 302 CPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLT 361

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YSKCG++  A ++F   R+ + V++W AMI G+  +G    AV  F +M   G  
Sbjct: 362 ALIDMYSKCGRVSIARRLFDSARD-RHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSL 420

Query: 380 PNGFTYSIILTA---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAK 434
           PN  T+  +L A      V   Q +   +K +Y  E        +++   + G LDEA  
Sbjct: 421 PNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWS 480

Query: 435 VFELID-EKDIVAWSAMLAG 453
             + +  E  I  + AML  
Sbjct: 481 FIKNMPIEPGISVYGAMLGA 500


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 275/859 (32%), Positives = 457/859 (53%), Gaps = 78/859 (9%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV-----LKTC 88
            LFD    +N   +  LL  Y ++   +EA  +F  +    +  + + +S       LK  
Sbjct: 224  LFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNA 283

Query: 89   GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
              LFD +               ++V    S+V  Y     + + R +FD M E N VSW 
Sbjct: 284  RKLFDEMP-------------EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWM 330

Query: 149  SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
             ++SGY          ++F +M     +P+   F  VL  +     +     +  + IK 
Sbjct: 331  VMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKT 390

Query: 209  GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
            G E    V +A+++ Y ++  +  A   F+ M +R+  +W +M+A +       +A + +
Sbjct: 391  GYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLY 450

Query: 269  NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
              +     E T +T  +++   A    ++ AR +  ++L   +   + I  G    Y++ 
Sbjct: 451  ERV----PEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAG----YTQN 502

Query: 329  GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            G +++A  +F  M  +K+  SW AMI+G +QN     A+    ++ R G  P+  +++  
Sbjct: 503  GMLKEAKDLFQKM-PVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSA 561

Query: 389  LTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKG----------------- 427
            L+A   +   +    +H+  IKT  + +  V   L++ Y K G                 
Sbjct: 562  LSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDT 621

Query: 428  --------------ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
                          +LD+A  VFE + ++D+V+W+A+++ Y Q G  E A+ ++  + + 
Sbjct: 622  VSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLAR 681

Query: 474  GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            G+KPN+ T +S+++AC     A++ G+QFHA   K   +  L V ++L+TMY K G  E 
Sbjct: 682  GIKPNQLTVTSLLSAC-GNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YED 739

Query: 534  ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
               VF+   + DL++WN+++ G AQ+G  K+A+++F++M  + +  D ++F+GV+ AC+H
Sbjct: 740  GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSH 799

Query: 594  AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            AGLVDEG  +F+ M  ++ I P + HY+CMVDL  RAG L +A  +I  MP    + +W 
Sbjct: 800  AGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWE 859

Query: 654  TVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
             +L AC              RL  +    SA YVLLSN++A+ G W + A +RKLM D+ 
Sbjct: 860  ALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQG 919

Query: 700  VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
            + KE G SWI+VKNK + F+ GD +H Q  +IYS L+E     +  GY PDT++VL D++
Sbjct: 920  LTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVE 979

Query: 760  DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
            +E K+  L  HSE+LA+ FG+++TP G+P+QI+KNLR+CGDCHT +K +SK+  R I++R
Sbjct: 980  EEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIR 1039

Query: 820  DTNRFHHFKEGLCSCGDYW 838
            D NRFHHF++G CSCGDYW
Sbjct: 1040 DGNRFHHFRDGSCSCGDYW 1058



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 146/557 (26%), Positives = 272/557 (48%), Gaps = 44/557 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD+ P+RN V +  ++  Y   S + EA ++F+ + R       S    VL     L
Sbjct: 315 RELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGL 374

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D      +    +K+G+  DV V +++++ Y R  +++     F+ M E N  SWT+++
Sbjct: 375 DDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMI 434

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + +A+    D  ++L+ R+  + +     T + ++   A  G +  A  +   ++     
Sbjct: 435 AAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEILNPN-- 488

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                 NA+I+ Y ++ M+++A+ +F  M  ++S +W +M+AG+V NE   EA E    +
Sbjct: 489 --VVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIEL 546

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G+  + S+F S +  CA   ++ + R +HS  +K G  F+  +  GL+  Y+KCG +
Sbjct: 547 HRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNV 606

Query: 332 EDASKIFSMMR------------------------------EMKDVVSWTAMISGHLQNG 361
           ED S +F  +R                                +DVVSWTA+IS ++Q G
Sbjct: 607 EDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAG 666

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGT 417
             ++A++ F  M   G++PN  T + +L+A   +       Q HA I K  ++    VG 
Sbjct: 667 HGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGN 726

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           +L+  Y K G  ++   VFE + E D++ W+A+L G AQ G  + A+KI+ Q+  EG+ P
Sbjct: 727 SLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILP 785

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           ++ +F  V+ AC+      E    F++ + K  +   +   + +V +  + G +  A  +
Sbjct: 786 DQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEAL 845

Query: 538 FKRQR-KRDLVSWNSMI 553
            +    K D V W +++
Sbjct: 846 IENMPVKPDSVIWEALL 862



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 280/593 (47%), Gaps = 71/593 (11%)

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           R   VE+ RRVF++M + +VVSW S+++GY++N   D    LF     + I+    T++ 
Sbjct: 183 RLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWTI 238

Query: 185 VLGVLADEGIVATAVQV------------HTMV---IKNGG------------EVVTSVC 217
           +L   A EG +  A +V            + M+   ++NG             E   +  
Sbjct: 239 LLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASW 298

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N++++ Y     + +AR +FD M +R+S++W  M++GYV    + EA++ F  M    A 
Sbjct: 299 NSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVAR 358

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             +S FV V+       +L L   L    +K G + D  + + ++ AY++ G ++ A   
Sbjct: 359 PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHF 418

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M E ++  SWT MI+   Q G +D A+  + ++  + V     T + ++TA   V  
Sbjct: 419 FETMPE-RNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGR 473

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            Q    I       +     A++  Y + G+L EA  +F+ +  K+  +W+AM+AG+ Q 
Sbjct: 474 IQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQN 533

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
            ++  A+++  +L   G  P++ +F+S ++AC A    VE G+  H+ +IK        V
Sbjct: 534 EESREALELLIELHRSGSVPSDSSFTSALSAC-ANIGDVEIGRVIHSLAIKTGCQFNSYV 592

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG---------------------- 555
            + L++MY+K GN+E  S VF+  R +D VSWNS+I G                      
Sbjct: 593 MNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDV 652

Query: 556 ---------YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
                    Y Q GH + AL++F +M  + ++ + +T   +++AC + G +  G+Q F  
Sbjct: 653 VSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHA 711

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           ++ +      +   + ++ +Y + G  E    +   MP       W  VL  C
Sbjct: 712 LIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGC 762



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 203/416 (48%), Gaps = 45/416 (10%)

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN------ELHMEAFETFN- 269
           CN  I    +   V +AR VF+ M  RD ++WNSM+ GY  N       L  +AF   N 
Sbjct: 174 CNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNI 233

Query: 270 ---NMGLAG------AELTRSTFVS-----------VIKLCATTKELRLARQLHSQVLKN 309
               + L G       E  R  F S           +I       +L+ AR+L  ++ + 
Sbjct: 234 RTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK 293

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
            +   +++ TG    Y  C +M +A ++F  M E ++ VSW  MISG++       A + 
Sbjct: 294 NVASWNSVVTG----YCHCYRMSEARELFDQMPE-RNSVSWMVMISGYVHISDYWEAWDV 348

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHI----IKTNYEKSFSVGTALLNAYVK 425
           F +M R   RP+   + ++L+A   +   ++   +    IKT YE    VG+A+LNAY +
Sbjct: 349 FVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTR 408

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G LD A   FE + E++  +W+ M+A +AQ G  + A+++Y ++  + V     T +++
Sbjct: 409 NGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA----TKTAM 464

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + A  A    +++ +          LN  +   +A++  Y++ G ++ A ++F++   ++
Sbjct: 465 MTA-YAQVGRIQKARLI----FDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKN 519

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
             SW +MI G+ Q+  +++ALE+  E+ R        +F   ++AC + G V+ G+
Sbjct: 520 SASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGR 575



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 158/360 (43%), Gaps = 33/360 (9%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + LF + P +N   +  ++  + ++   +EAL L + + R G     S+ +S L  C
Sbjct: 506 KEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSAC 565

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             + D   GR +H   +K+G   +  V   L+ +Y +  NVEDG  VF  +   + VSW 
Sbjct: 566 ANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWN 625

Query: 149 SLLSGYARNKMND--RV-----------------------------LELFHRMQVEGIKP 177
           SL+SG + N M D  RV                             L+LF  M   GIKP
Sbjct: 626 SLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKP 685

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           N  T +++L    + G +    Q H ++ K G +    V N+LI+MY K     D   VF
Sbjct: 686 NQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVF 744

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           + M + D ITWN+++ G   N L  EA + F  M + G    + +F+ V+  C+    + 
Sbjct: 745 EEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVD 804

Query: 298 LA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
                 +S   K GI       T ++    + G + +A  +   M    D V W A++  
Sbjct: 805 EGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGA 864


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/738 (34%), Positives = 400/738 (54%), Gaps = 41/738 (5%)

Query: 119  LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
            ++  Y  + ++   + +F      N  +WT ++  +A        L LF  M  EG+ P+
Sbjct: 294  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 353

Query: 179  SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
              T +TVL +        T   +H   IK G +    VCN L+  Y K  ++  AR VF 
Sbjct: 354  RVTVTTVLNLPG-----CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 408

Query: 239  GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
             M D+D++T+N+M+ G     LH +A + F  M  AG                +   L L
Sbjct: 409  EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGY---------------SRHPLHL 453

Query: 299  ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             +  HS+     +  +  +   L+  YSKC  ++D  ++F  M E +D VS+  +I+ + 
Sbjct: 454  LQYSHSRSRSTSV-LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPE-RDNVSYNVIIAAYA 511

Query: 359  QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
             N      +  F +M + G       Y+ +L+   ++       Q+HA ++         
Sbjct: 512  WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 571

Query: 415  VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
            +G AL++ Y K G+LD A   F    EK  ++W+A++ GY Q G  E A++++  +   G
Sbjct: 572  LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 631

Query: 475  VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
            ++P+  TFSS+I A ++  A +  G+Q H+  I++   +++   S LV MY+K G ++ A
Sbjct: 632  LRPDRATFSSIIKASSS-LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 690

Query: 535  SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
               F    +R+ +SWN++I  YA +G  K A+++F+ M       D +TF+ V+ AC+H 
Sbjct: 691  LRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHN 750

Query: 595  GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
            GL DE  +YF +M +++ I P  EHY+C++D   R G   +   ++  MPF A   +W +
Sbjct: 751  GLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 810

Query: 655  VLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
            +L +CR              L  ++P D+  YV+LSN+YA  G W++ A V+K+M DR V
Sbjct: 811  ILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGV 870

Query: 701  KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
            +KE+GYSW+E+K K YSF + D++ P  ++I  +L+ L   +   GYKPD +  L  +D 
Sbjct: 871  RKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDH 930

Query: 761  EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 820
            E K   L  HSERLAIAF L+ TPAG P++I+KNL  C DCH VIK+ISK+  RDI+VRD
Sbjct: 931  ELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRD 990

Query: 821  TNRFHHFKEGLCSCGDYW 838
            + RFHHFK+G+CSCGDYW
Sbjct: 991  SRRFHHFKDGVCSCGDYW 1008



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 267/546 (48%), Gaps = 41/546 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF  SP RN   +  ++  +       +AL+LF  +   G+     T+++VL   GC 
Sbjct: 308 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 367

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                   +H   +K G    V V  +L+D Y +   +   RRVF +M++ + V++ +++
Sbjct: 368 VP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMM 422

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G ++  ++ + L+LF  M+  G   +                    +Q      ++   
Sbjct: 423 MGCSKEGLHTQALQLFAAMRRAGYSRHPLHL----------------LQYSHSRSRSTSV 466

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N+L+  Y K   + D R +FD M +RD++++N ++A Y  N+        F  M
Sbjct: 467 LNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREM 526

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +     + +++ +  +  ++ + +Q+H+Q++  G+  +  +   L+  YSKCG +
Sbjct: 527 QKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGML 586

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A   FS  R  K  +SWTA+I+G++QNG  + A+  F  M R G+RP+  T+S I+ A
Sbjct: 587 DAAKSNFS-NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA 645

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +++      Q+H+++I++ Y+ S   G+ L++ Y K G LDEA + F+ + E++ ++W
Sbjct: 646 SSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 705

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-- 505
           +A+++ YA  G+ + A+K++  +   G  P+  TF SV+ AC+    A E  K FH    
Sbjct: 706 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH 765

Query: 506 --SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK----RQRKRDLVSWNSMICGYAQH 559
             SI     +  CV   L       G +   S+V K       K D + W S++     H
Sbjct: 766 QYSISPWKEHYACVIDTL-------GRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIH 818

Query: 560 GHTKKA 565
           G+ + A
Sbjct: 819 GNQELA 824



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 219/491 (44%), Gaps = 70/491 (14%)

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGM--------------------------- 240
            G +V+T   N  +   L S  +  ARA+FD M                           
Sbjct: 251 TGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHL 310

Query: 241 ----EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
                 R++ TW  M+  +       +A   F  M   G    R T  +V+ L   T   
Sbjct: 311 FLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT--- 367

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
                LH   +K G+D    +   L+ AY K G +  A ++F  M + KD V++ AM+ G
Sbjct: 368 --VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAMMMG 424

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHA-HIIKTNYEKSFS- 414
             + G    A+  F  M R G                    +  H  H+++ ++ +S S 
Sbjct: 425 CSKEGLHTQALQLFAAMRRAG--------------------YSRHPLHLLQYSHSRSRST 464

Query: 415 ------VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                 V  +LL+ Y K   LD+  ++F+ + E+D V+++ ++A YA        ++++R
Sbjct: 465 SVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFR 524

Query: 469 QLTSEGVKPNEFTFSSVIN-ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           ++   G       ++++++ A + P   V  GKQ HA  +   L +   + +AL+ MYSK
Sbjct: 525 EMQKLGFDRQVLPYATMLSVAGSLPD--VHIGKQIHAQLVLLGLASEDLLGNALIDMYSK 582

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +++A   F  + ++  +SW ++I GY Q+G  ++AL++F +MRR  L  D  TF  +
Sbjct: 583 CGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSI 642

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           I A +   ++  G+Q    ++   +        S +VD+Y++ G L++A+   + MP   
Sbjct: 643 IKASSSLAMIGLGRQLHSYLIRSGYKSSVFSG-SVLVDMYAKCGCLDEALRTFDEMPERN 701

Query: 648 SATVWRTVLAA 658
           S + W  V++A
Sbjct: 702 SIS-WNAVISA 711



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 143/271 (52%), Gaps = 5/271 (1%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK D     + LFD  P+R+ V YN ++  Y  +      L LF  +++LG       
Sbjct: 478 FYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLP 537

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +++L   G L D   G+Q+H + V  G A +  +  +L+D+Y +   ++  +  F + +
Sbjct: 538 YATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS 597

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E + +SWT+L++GY +N  ++  L+LF  M+  G++P+  TFS+++   +   ++    Q
Sbjct: 598 EKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQ 657

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H+ +I++G +      + L+ MY K   + +A   FD M +R+SI+WN++++ Y     
Sbjct: 658 LHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGE 717

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
              A + F  M   G      TF+SV+  C+
Sbjct: 718 AKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 748


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/738 (33%), Positives = 417/738 (56%), Gaps = 20/738 (2%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           SLF   P  + V +N L+  YC+  + + ++ L + + R G+ L  +TL+ +LK+CG L 
Sbjct: 106 SLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLD 165

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   G Q+H   VK+G   DV   ++LVD+Y +  +++D  R F  M E N VSW + ++
Sbjct: 166 DLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIA 225

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N+   R +ELF +MQ  G+  +   +++     A    ++TA Q+H   IKN    
Sbjct: 226 GCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSS 285

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  A++ +Y K+  + DAR  F G+   +  T N+M+ G V   L  EA + F  M 
Sbjct: 286 DRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMT 345

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +G      +   V   CA  K      Q+H   +K+G D D  +R  ++  Y KC  + 
Sbjct: 346 RSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALV 405

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  +F  M E +D VSW A+I+   QN   +  +    +M R G+ P+ FTY  +L A 
Sbjct: 406 EAYLVFQEM-EQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKAC 464

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +   +    VH   IK+       V + +++ Y K G + EA K+ + I  +++V+W+
Sbjct: 465 AGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWN 524

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           ++++G++    +E A + + ++   GVKP+ FT+++V++ C A  A +E GKQ H   IK
Sbjct: 525 SIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTC-ANLATIELGKQIHGQIIK 583

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            ++     +SS LV MY+K GN+  +  +F++ RK D VSWN+MICGYA HG   +ALE+
Sbjct: 584 QEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEM 643

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M+R ++  +  TF+ V+ AC+H GL+D+G QYF +M + + + P +EH++CMVD+  
Sbjct: 644 FERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILG 703

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           R+   ++A++ I  MP  A A VW+T+L+ C++              + L P D+++Y+L
Sbjct: 704 RSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYIL 763

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA +G W + +R R+LM   +++KE G SWIEV+++ + FL GD  HP+S ++Y  
Sbjct: 764 LSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEM 823

Query: 735 LEELSTRLKDAGYKPDTS 752
           L  L   +K +GY+P ++
Sbjct: 824 LNSLIGEMKLSGYEPASA 841



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 271/539 (50%), Gaps = 18/539 (3%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD     +++  Y+   + +    +F  M + +VVSW +L+SGY ++ M    + L   M
Sbjct: 83  RDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEM 142

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              G+  +  T + +L        +A  VQ+H + +K G E      +AL+ MY K + +
Sbjct: 143 SRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSL 202

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            DA   F GM +R+S++W + +AG V NE +    E F  M   G  +++  + S  + C
Sbjct: 203 DDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSC 262

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A    L  ARQLH+  +KN    D  + T ++  Y+K G + DA + F  +    +V + 
Sbjct: 263 AAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPH-HNVETC 321

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
            AM+ G ++ G    A+  F  MTR GV  +  + S + +A   V  +    QVH   +K
Sbjct: 322 NAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVK 381

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           + ++    V  A+L+ Y K   L EA  VF+ ++++D V+W+A++A   Q    E  +  
Sbjct: 382 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAH 441

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
             ++   G++P++FT+ SV+ AC A   ++E G   H  +IK+ L     VSS +V MY 
Sbjct: 442 LNEMLRSGMEPDDFTYGSVLKAC-AGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYC 500

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G I  A ++  R   ++LVSWNS+I G++    +++A   F EM    ++ D  T+  
Sbjct: 501 KCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYAT 560

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SCMVDLYSRAG-------MLEKA 636
           V+  C +   ++ G+Q    ++ +  +    + Y  S +VD+Y++ G       M EKA
Sbjct: 561 VLDTCANLATIELGKQIHGQIIKQEMLG---DEYISSTLVDMYAKCGNMPDSLLMFEKA 616



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 234/505 (46%), Gaps = 50/505 (9%)

Query: 181 TFSTVLGVLADEG--IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           TFS +  + A  G   + T    H  ++ +G    T V N L+ MY +      A  VFD
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 239 GMEDRDSITWNSMVAGYV---TNELHMEAFETF----------------------NNMGL 273
            M  RD+++WN+M+  YV     +     F T                       N++GL
Sbjct: 79  TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138

Query: 274 A------GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           +      G  L R+T   ++K C    +L L  Q+H+  +K G++ D    + L+  Y K
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           C  ++DA + F  M E ++ VSW A I+G +QN      +  F QM R G+  +   Y+ 
Sbjct: 199 CRSLDDALRFFHGMGE-RNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYAS 257

Query: 388 IL---TAQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
                 A P +S   Q+HAH IK  +     VGTA+++ Y K G L +A + F  +   +
Sbjct: 258 AFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHN 317

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +   +AM+ G  + G    A+++++ +T  GV  +  + S V +AC A      QG Q H
Sbjct: 318 VETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSAC-AEVKGYFQGLQVH 376

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
             ++K+  +  +CV +A++ +Y K   +  A  VF+   +RD VSWN++I    Q+   +
Sbjct: 377 CLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 436

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACT-----HAGLVDEGQQYFDIMVNEHHIYPTME 618
             +    EM R  +E D  T+  V+ AC        GLV  G+     +  +  +  T  
Sbjct: 437 DTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST-- 494

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRM 643
               +VD+Y + G + +A  + +R+
Sbjct: 495 ----VVDMYCKCGAITEAQKLHDRI 515



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 131/314 (41%), Gaps = 38/314 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q L DR   +  V +N ++  +      +EA   F  +  +G+     T ++VL TC  L
Sbjct: 509 QKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANL 568

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H + +K     D  +S++LVD+Y +  N+ D   +F+   + + VSW +++
Sbjct: 569 ATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMI 628

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGG 210
            GYA +      LE+F RMQ   + PN  TF  VL   +  G++    Q  H M  +   
Sbjct: 629 CGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKL 688

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFETFN 269
                    ++ +  +SK  ++A      M  + D++ W ++                  
Sbjct: 689 VPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTL------------------ 730

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
                            + +C   +++ +A    S VL+   D D ++   L   Y+  G
Sbjct: 731 -----------------LSICKIRQDVEVAETAASNVLRLDPD-DASVYILLSNVYAGSG 772

Query: 330 KMEDASKIFSMMRE 343
           K  D S+   +MR+
Sbjct: 773 KWVDVSRTRRLMRQ 786



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 34/211 (16%)

Query: 481 TFSSVINAC-TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           TFS +   C +A  +A+  G+  HA  + +       VS+ L+ MY++ G    A  VF 
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 540 RQRKRDLVSWNSM-------------------------------ICGYAQHGHTKKALEV 568
               RD VSWN+M                               I GY QHG  + ++ +
Sbjct: 79  TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
             EM R+ +  D  T   ++ +C     +  G Q   + V    +   +   S +VD+Y 
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKT-GLETDVRAGSALVDMYG 197

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           +   L+ A+   + M    S + W   +A C
Sbjct: 198 KCRSLDDALRFFHGMGERNSVS-WGAAIAGC 227


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/737 (35%), Positives = 412/737 (55%), Gaps = 68/737 (9%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            SL+  Y R   +E  R VFD+M + N++SW S+++GY +NK       +F +M     +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----E 157

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
            N+ ++                                   N L+S Y+ + M+ +AR V
Sbjct: 158 RNTISW-----------------------------------NGLVSGYINNGMINEAREV 182

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD M +R+ ++W +MV GYV   +  EA   F  M        ++     + L    +E 
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP------EKNVVSWTVMLGGLLQEG 236

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           R+      ++     + D   RT ++  Y + G++ +A  +F  M   ++VVSWT MI+G
Sbjct: 237 RIDEA--CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPR-RNVVSWTTMITG 293

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG 416
           ++QN  +D+A   F  M  +    N  +++ +L            + +      KS    
Sbjct: 294 YVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVAC 349

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
            A++  + + G + +A +VF+ + EKD   WSAM+  Y + G    A++++R +  EG++
Sbjct: 350 NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIR 409

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PN  +  SV++ C A  A ++ G++ HA  ++++ +  + V+S L++MY K GN+  A +
Sbjct: 410 PNFPSLISVLSVC-AGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQ 468

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF R   +D+V WNS+I GYAQHG   +AL VF +M    +  D +TF+GV++AC++ G 
Sbjct: 469 VFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN 528

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V +G + F+ M  ++ +   +EHY+CMVDL  RAG L +AMD+I +MP  A A +W  +L
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588

Query: 657 AACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            ACR              L+ L+P ++  ++LLSN+YA+ G W + A +R+ M DR+V K
Sbjct: 589 GACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSK 648

Query: 703 EAGYSWIEVKNKTYSFLAGDIS-HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE 761
             G SWI V+ K + F  GD S HP+ ++I   LE LS  L++AGY PD S+VL D+D+E
Sbjct: 649 YPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEE 708

Query: 762 HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
            K   L  HSE+LA+A+GL+  P G P++++KNLRVCGDCH  IKLI+K+  R+I++RD 
Sbjct: 709 EKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDA 768

Query: 822 NRFHHFKEGLCSCGDYW 838
           NRFHHFK+G CSC DYW
Sbjct: 769 NRFHHFKDGSCSCRDYW 785



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 250/537 (46%), Gaps = 63/537 (11%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + +FD    +N + +N ++  Y ++   QEA N+F              +S      
Sbjct: 115 EKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMF------------DKMSE----- 157

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                                 R+      LV  Y+    + + R VFD M E NVVSWT
Sbjct: 158 ----------------------RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWT 195

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ GY +  M      LF +M     + N  +++ +LG L  EG +  A ++  M+ + 
Sbjct: 196 AMVRGYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEK 251

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             +VVT     +I  Y +   + +AR +FD M  R+ ++W +M+ GYV N+    A + F
Sbjct: 252 --DVVTRT--NMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF 307

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSK 327
             M     E    ++ +++K       L  A +L      N +     +    M+  + +
Sbjct: 308 EVM----PEKNEVSWTAMLKGYTNCGRLDEASELF-----NAMPIKSVVACNAMILCFGQ 358

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G++  A ++F  MRE KD  +W+AMI  + + G    A+  F  M REG+RPN  +   
Sbjct: 359 NGEVPKARQVFDQMRE-KDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLIS 417

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+    ++      ++HA ++++ ++    V + LL+ Y+K G L +A +VF+    KD
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V W++++ GYAQ G    A++++  +   G+ P++ TF  V++AC+      +  + F+
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQH 559
           +   K ++   +   + +V +  + G +  A ++ ++   + D + W +++     H
Sbjct: 538 SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 9/334 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+RN V +  ++  Y ++     A  LF  +       + + L      CG L +
Sbjct: 275 LFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKG-YTNCGRLDE 333

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                    E   +   + V    +++  + +   V   R+VFD M E +  +W++++  
Sbjct: 334 A-------SELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y R  +    LELF  MQ EGI+PN  +  +VL V A    +    ++H  ++++  ++ 
Sbjct: 387 YERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLD 446

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V + L+SMY+K   +  A+ VFD    +D + WNS++ GY  + L +EA   F++M  
Sbjct: 447 VYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHF 506

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           +G      TFV V+  C+ T  ++   ++ +S   K  ++        ++    + GK+ 
Sbjct: 507 SGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLN 566

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +A  +   M    D + W A++     +  +DLA
Sbjct: 567 EAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 20/170 (11%)

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +N +   ++L+T YS+ G IE A  VF   R ++++SWNS++ GY Q+   ++A  +F +
Sbjct: 95  SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M     E + I++ G+++   + G+++E ++ FD M   + +      ++ MV  Y + G
Sbjct: 155 MS----ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVV-----SWTAMVRGYVKEG 205

Query: 632 MLEKAMDIINRMPFAASATVWRTVLA----------ACRLISLQPHDSAI 671
           M+ +A  +  +MP   +   W  +L           ACRL  + P    +
Sbjct: 206 MISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVV 254


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 260/687 (37%), Positives = 387/687 (56%), Gaps = 28/687 (4%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G  P   TF+++L + A    +AT   VH  +   G         AL +MY K +   DA
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCAT 292
           R VFD M  RD + WN++VAGY  N L   A      M     E   + T VSV+  CA 
Sbjct: 280 RRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD 339

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
            + L   R++H+  ++ G D   N+ T ++  Y KCG ++ A K+F  M++ ++ VSW A
Sbjct: 340 AQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQD-RNSVSWNA 398

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHII 405
           MI G+ +NG    A+  F +M  EGV     T   +L A  A           +VH  ++
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGV---DVTDVSVLAALHACGELGFLDEGRRVHELLV 455

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           +   E + +V  AL+  Y K    D AA+VF+ +  K  V+W+AM+ G  Q G +E AV+
Sbjct: 456 RIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVR 515

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++ ++  E VKP+ FT  S+I A    S  + Q +  H  SI+  L+  + V +AL+ MY
Sbjct: 516 LFSRMQLENVKPDSFTLVSIIPALADISDPL-QARWIHGYSIRLHLDQDVYVLTALIDMY 574

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           +K G +  A  +F   R R +++WN+MI GY  HG  K A+E+F+EM+      +  TF+
Sbjct: 575 AKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFL 634

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
            V++AC+HAGLVDEGQ+YF  M  ++ + P MEHY  MVDL  RAG L +A   I +MP 
Sbjct: 635 SVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPM 694

Query: 646 AASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARV 691
               +V+  +L AC              R+  L+P +   +VLL+N+YA    W++ ARV
Sbjct: 695 EPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARV 754

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           R  M  + ++K  G+S +++KN+ ++F +G  +H Q+  IY++L +L   +K  GY PDT
Sbjct: 755 RTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDT 814

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
             +  D++D+ K  +L+ HSE+LAIA+GL+ T  G  +QI KNLRVC DCH   KLIS +
Sbjct: 815 DSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLV 873

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             R+I++RD  RFHHFK+G CSCGDYW
Sbjct: 874 TGREIIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 139/428 (32%), Positives = 237/428 (55%), Gaps = 7/428 (1%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T +S+LK C    D   GR VH +    G + +   +T+L ++Y +     D RRVFD M
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATA 198
              + V+W +L++GYARN + +  + +  RMQ E G +P++ T  +VL   AD   +   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            +VH   ++ G +   +V  A++ +Y K   V  AR VFDGM+DR+S++WN+M+ GY  N
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               EA   F  M   G ++T  + ++ +  C     L   R++H  +++ G++ + N+ 
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y KC + + A+++F  +   K  VSW AMI G  QNG+ + AV  F +M  E V
Sbjct: 467 NALITMYCKCKRTDLAAQVFDEL-GYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENV 525

Query: 379 RPNGFTYSIILTAQPAVS-PFQ---VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           +P+ FT   I+ A   +S P Q   +H + I+ + ++   V TAL++ Y K G +  A  
Sbjct: 526 KPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARS 585

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F    ++ ++ W+AM+ GY   G  + AV+++ ++ S G  PNE TF SV++AC+  + 
Sbjct: 586 LFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSH-AG 644

Query: 495 AVEQGKQF 502
            V++G+++
Sbjct: 645 LVDEGQEY 652



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 187/361 (51%), Gaps = 2/361 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGC 90
           + +FDR P R+ V +N L+  Y R+ L + A+ + + ++   G      TL SVL  C  
Sbjct: 280 RRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD 339

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                  R+VH   V+ GF   VNVST+++D+Y +   V+  R+VFD M + N VSW ++
Sbjct: 340 AQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAM 399

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GYA N      L LF RM  EG+     +    L    + G +    +VH ++++ G 
Sbjct: 400 IKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGL 459

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E   +V NALI+MY K K    A  VFD +  +  ++WN+M+ G   N    +A   F+ 
Sbjct: 460 ESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSR 519

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L   +    T VS+I   A   +   AR +H   ++  +D D  + T L+  Y+KCG+
Sbjct: 520 MQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 579

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +  A  +F+  R+ + V++W AMI G+  +G+  +AV  F +M   G  PN  T+  +L+
Sbjct: 580 VSIARSLFNSARD-RHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLS 638

Query: 391 A 391
           A
Sbjct: 639 A 639



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD    RN V +N ++  Y  +    EAL LF  +   G+ +   ++ + L  CG L
Sbjct: 382 RKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGEL 441

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR+VH   V+ G   +VNV  +L+ +Y +    +   +VFD++     VSW +++
Sbjct: 442 GFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMI 501

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G  +N  ++  + LF RMQ+E +KP+SFT  +++  LAD      A  +H   I+   +
Sbjct: 502 LGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLD 561

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  ALI MY K   V  AR++F+   DR  ITWN+M+ GY ++     A E F  M
Sbjct: 562 QDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEM 621

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNIRTGL---- 321
             +G     +TF+SV+  C+           H+ ++  G ++      D+ +  G+    
Sbjct: 622 KSSGKVPNETTFLSVLSACS-----------HAGLVDEGQEYFSSMKEDYGLEPGMEHYG 670

Query: 322 -MV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            MV    + GK+ +A      M     +  + AM+     +  ++LA
Sbjct: 671 TMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELA 717


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/659 (38%), Positives = 396/659 (60%), Gaps = 24/659 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +H  +++ G +  T + N ++           +  + D  ++ +   +N+M+ G V N+
Sbjct: 28  HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLND 87

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              E+ E +++M   G      TF  V+K CA   +  L  ++HS V+K G + D  ++ 
Sbjct: 88  CFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKI 147

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+KCG +++A K+F  + + K+  SWTA ISG++  G    A++ F ++   G+R
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPD-KNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+ F+   +L+A       +    +  +I +    ++  V TAL++ Y K G ++ A  V
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + EK+IV+WS+M+ GYA  G  + A+ ++ ++ +EG+KP+ +    V+ +C A   A
Sbjct: 267 FDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSC-ARLGA 325

Query: 496 VEQGKQFHACSIKAK--LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
           +E G  + +  I     L+N++ + +AL+ MY+K G ++ A EVF+  RK+D V WN+ I
Sbjct: 326 LELG-DWASNLINGNEFLDNSV-LGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAI 383

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            G A  GH K AL +F +M +  ++ D  TF+G++ ACTHAGLV+EG++YF+ M     +
Sbjct: 384 SGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTL 443

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL------------ 661
            P +EHY CMVDL  RAG L++A  +I  MP  A+A VW  +L  CRL            
Sbjct: 444 TPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLK 503

Query: 662 --ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
             I+L+P  S  YVLLSN+YAA+  W+E A++R +M++R VKK  GYSWIEV    + FL
Sbjct: 504 KLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFL 563

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
            GD SHP S +IY+KL EL+  LK AGY P T +VL DI++E KE  +  HSE+LA+AFG
Sbjct: 564 VGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFG 623

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L++T     + +VKNLRVCGDCH  IK IS++  R+I+VRD NRFH F +GLCSC DYW
Sbjct: 624 LISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 237/480 (49%), Gaps = 6/480 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H   ++ G   D  +   ++       N     R+ D   E N+  + +++ G   N
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 +E++H M+ EG+ P+SFTF  VL   A        V++H++V+K G E    V 
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            +LI++Y K   + +A  VFD + D++  +W + ++GYV      EA + F  +   G  
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               + V V+  C  T +LR    +   + +NG+  +  + T L+  Y KCG ME A  +
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSV 266

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M E K++VSW++MI G+  NG    A++ F +M  EG++P+ +    +L +   +  
Sbjct: 267 FDGMLE-KNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGA 325

Query: 398 FQVH---AHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            ++    +++I  N +  +  +GTAL++ Y K G +D A +VF  + +KD V W+A ++G
Sbjct: 326 LELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISG 385

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
            A  G  + A+ ++ Q+   G+KP+  TF  ++ ACT      E  + F++      L  
Sbjct: 386 LAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTP 445

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +     +V +  + G ++ A ++ K    + + + W +++ G   H  T+    V K++
Sbjct: 446 EIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKL 505



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 225/454 (49%), Gaps = 25/454 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           + D++ + N   +N ++     +   QE++ ++  +R+ GL     T   VLK C  + D
Sbjct: 64  ILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLD 123

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G ++H   VK+G   D  V  SL++LY +   +++  +VFDD+ + N  SWT+ +SG
Sbjct: 124 SELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISG 183

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y         +++F R+   G++P+SF+   VL      G + +   +   + +NG    
Sbjct: 184 YVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRN 243

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL+  Y K   +  AR+VFDGM +++ ++W+SM+ GY +N L  EA + F  M  
Sbjct: 244 VFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLN 303

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGKM 331
            G +      V V+  CA    L L     +  L NG +F  N  + T L+  Y+KCG+M
Sbjct: 304 EGLKPDCYAMVGVLCSCARLGALELGDW--ASNLINGNEFLDNSVLGTALIDMYAKCGRM 361

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A ++F  MR+ KD V W A ISG   +G +  A+  F QM + G++P+  T+  +L A
Sbjct: 362 DRAWEVFRGMRK-KDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCA 420

Query: 392 QPAVSPFQVHAHIIK------TNYEKSFSVGT------ALLNAYVKKGILDEAAKVFELI 439
                    HA +++       + E  F++         +++   + G LDEA ++ + +
Sbjct: 421 -------CTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSM 473

Query: 440 D-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
             E + + W A+L G     DT+    + ++L +
Sbjct: 474 PMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIA 507



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 5/175 (2%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY K     + +S+FD   ++N V ++ ++  Y  + L +EAL+LF  +   GL      
Sbjct: 253 FYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYA 312

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           +  VL +C  L     G         + F  +  + T+L+D+Y +   ++    VF  M 
Sbjct: 313 MVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR 372

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           + + V W + +SG A +      L LF +M+  GIKP+  TF  +L      G+V
Sbjct: 373 KKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLV 427



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/145 (19%), Positives = 68/145 (46%), Gaps = 1/145 (0%)

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K  HA  ++  L+    + + ++      GN   +  +  + ++ ++  +N+MI G   +
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
              ++++E++  MR++ L  D  TF  V+ AC      + G +   ++V           
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMP 644
            S +++LY++ G ++ A  + + +P
Sbjct: 147 IS-LINLYTKCGFIDNAFKVFDDIP 170


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/737 (35%), Positives = 412/737 (55%), Gaps = 68/737 (9%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            SL+  Y R   +E  R VFD+M + N++SW S+++GY +NK       +F +M     +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----E 157

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
            N+ ++                                   N L+S Y+ + M+ +AR V
Sbjct: 158 RNTISW-----------------------------------NGLVSGYINNGMINEAREV 182

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD M +R+ ++W +MV GYV   +  EA   F  M        ++     + L    +E 
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMP------EKNVVSWTVMLGGLLQEG 236

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           R+      ++     + D   RT ++  Y + G++ +A  +F  M   ++VVSWT MI+G
Sbjct: 237 RIDEA--CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPR-RNVVSWTTMITG 293

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG 416
           ++QN  +D+A   F  M  +    N  +++ +L            + +      KS    
Sbjct: 294 YVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVAC 349

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
            A++  + + G + +A +VF+ + EKD   WSAM+  Y + G    A++++R +  EG++
Sbjct: 350 NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIR 409

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PN  +  SV++ C A  A ++ G++ HA  ++++ +  + V+S L++MY K GN+  A +
Sbjct: 410 PNFPSLISVLSVC-AGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQ 468

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF R   +D+V WNS+I GYAQHG   +AL VF +M    +  D +TF+GV++AC++ G 
Sbjct: 469 VFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN 528

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V +G + F+ M  ++ +   +EHY+CMVDL  RAG L +AMD+I +MP  A A +W  +L
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588

Query: 657 AACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            ACR              L+ L+P ++  ++LLSN+YA+ G W + A +R+ M DR+V K
Sbjct: 589 GACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSK 648

Query: 703 EAGYSWIEVKNKTYSFLAGDIS-HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE 761
             G SWI V+ K + F  GD S HP+ ++I   LE LS  L++AGY PD S+VL D+D+E
Sbjct: 649 YPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEE 708

Query: 762 HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
            K   L  HSE+LA+A+GL+  P G P++++KNLRVCGDCH  IKLI+K+  R+I++RD 
Sbjct: 709 EKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDA 768

Query: 822 NRFHHFKEGLCSCGDYW 838
           NRFHHFK+G CSC DYW
Sbjct: 769 NRFHHFKDGSCSCRDYW 785



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/537 (24%), Positives = 250/537 (46%), Gaps = 63/537 (11%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + +FD    +N + +N ++  Y ++   QEA N+F              +S      
Sbjct: 115 EKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMF------------DKMSE----- 157

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                                 R+      LV  Y+    + + R VFD M E NVVSWT
Sbjct: 158 ----------------------RNTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWT 195

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ GY +  M      LF +M     + N  +++ +LG L  EG +  A ++  M+ + 
Sbjct: 196 AMVRGYVKEGMISEAETLFWQMP----EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEK 251

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             +VVT     +I  Y +   + +AR +FD M  R+ ++W +M+ GYV N+    A + F
Sbjct: 252 --DVVTRT--NMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLF 307

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSK 327
             M     E    ++ +++K       L  A +L      N +     +    M+  + +
Sbjct: 308 EVM----PEKNEVSWTAMLKGYTNCGRLDEASELF-----NAMPIKSVVACNAMILCFGQ 358

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G++  A ++F  MRE KD  +W+AMI  + + G    A+  F  M REG+RPN  +   
Sbjct: 359 NGEVPKARQVFDQMRE-KDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLIS 417

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+    ++      ++HA ++++ ++    V + LL+ Y+K G L +A +VF+    KD
Sbjct: 418 VLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD 477

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V W++++ GYAQ G    A++++  +   G+ P++ TF  V++AC+      +  + F+
Sbjct: 478 VVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFN 537

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQH 559
           +   K ++   +   + +V +  + G +  A ++ ++   + D + W +++     H
Sbjct: 538 SMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 9/334 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+RN V +  ++  Y ++     A  LF  +       + + L      CG L +
Sbjct: 275 LFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKG-YTNCGRLDE 333

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                    E   +   + V    +++  + +   V   R+VFD M E +  +W++++  
Sbjct: 334 A-------SELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y R  +    LELF  MQ EGI+PN  +  +VL V A    +    ++H  ++++  ++ 
Sbjct: 387 YERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLD 446

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V + L+SMY+K   +  A+ VFD    +D + WNS++ GY  + L +EA   F++M  
Sbjct: 447 VYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHF 506

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           +G      TFV V+  C+ T  ++   ++ +S   K  ++        ++    + GK+ 
Sbjct: 507 SGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLN 566

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +A  +   M    D + W A++     +  +DLA
Sbjct: 567 EAMDLIEKMPMEADAIIWGALLGACRTHMKLDLA 600



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 87/170 (51%), Gaps = 20/170 (11%)

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +N +   ++L+T YS+ G IE A  VF   R ++++SWNS++ GY Q+   ++A  +F +
Sbjct: 95  SNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDK 154

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M     E + I++ G+++   + G+++E ++ FD M   + +      ++ MV  Y + G
Sbjct: 155 MS----ERNTISWNGLVSGYINNGMINEAREVFDRMPERNVV-----SWTAMVRGYVKEG 205

Query: 632 MLEKAMDIINRMPFAASATVWRTVLA----------ACRLISLQPHDSAI 671
           M+ +A  +  +MP   +   W  +L           ACRL  + P    +
Sbjct: 206 MISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVV 254


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/593 (38%), Positives = 371/593 (62%), Gaps = 22/593 (3%)

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E   +M L G +     + +V+  C   + +R  +++H+ ++K        +RT L+V Y
Sbjct: 44  EALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFY 103

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            KC  + DA  +F +M E ++VVSWTAMIS + Q G    A++ F QM R G  PN FT+
Sbjct: 104 VKCDSLRDARHVFDVMPE-RNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTF 162

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +LT+    S F    Q+H+HIIK NYE    VG++LL+ Y K G + EA  +F+ + E
Sbjct: 163 ATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPE 222

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+V+ +A+++GYAQ+G  E A++++R+L  EG++ N  T++SV+ A +   AA++ GKQ
Sbjct: 223 RDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSG-LAALDHGKQ 281

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H   +++++ + + + ++L+ MYSK GN+  A  +F    +R ++SWN+M+ GY++HG 
Sbjct: 282 VHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGE 341

Query: 562 TKKALEVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIYPTMEH 619
            ++ LE+F  M  ++ ++ D +T + V++ C+H GL D+G   ++D+   +  + P  +H
Sbjct: 342 GREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKH 401

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQ 665
           Y C+VD+  RAG +E A + + +MPF  SA +W  +L AC              +L+ ++
Sbjct: 402 YGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIE 461

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P ++  YV+LSN+YA+ G W++   +R LM  + V KE G SWIE+    ++F A D SH
Sbjct: 462 PENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSH 521

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+  ++ +K++ELS R K+AGY PD S VL D+D+E KE IL  HSE+LA+ FGL+ATP 
Sbjct: 522 PRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPE 581

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             P++++KNLR+C DCH   K  SK+  R++ +RD NRFH    G CSCGDYW
Sbjct: 582 SVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 199/391 (50%), Gaps = 15/391 (3%)

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
           + R+ E    M + G+  N   ++TVL     +  +    +VH  +IK        +   
Sbjct: 39  DTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTR 98

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI  Y+K   +RDAR VFD M +R+ ++W +M++ Y       +A   F  M  +G E  
Sbjct: 99  LIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPN 158

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             TF +V+  C  +    L RQ+HS ++K   +    + + L+  Y+K GK+ +A  IF 
Sbjct: 159 EFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQ 218

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF- 398
            + E +DVVS TA+ISG+ Q G  + A+  F ++ REG++ N  TY+ +LTA   ++   
Sbjct: 219 CLPE-RDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALD 277

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              QVH H++++       +  +L++ Y K G L  A ++F+ + E+ +++W+AML GY+
Sbjct: 278 HGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYS 337

Query: 456 QIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFH-----ACSIKA 509
           + G+    ++++  +  E  VKP+  T  +V++ C+      +    F+       S++ 
Sbjct: 338 KHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQP 397

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKR 540
              +  CV    V M  + G +E+A E  K+
Sbjct: 398 DSKHYGCV----VDMLGRAGRVEAAFEFVKK 424



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 157/296 (53%), Gaps = 2/296 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH   +K+ +   V + T L+  Y++ +++ D R VFD M E NVVSWT+++S Y++
Sbjct: 77  GQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQ 136

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                + L LF +M   G +PN FTF+TVL             Q+H+ +IK   E    V
Sbjct: 137 RGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYV 196

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY K   + +AR +F  + +RD ++  ++++GY    L  EA E F  +   G 
Sbjct: 197 GSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGM 256

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    T+ SV+   +    L   +Q+H+ +L++ +     ++  L+  YSKCG +  A +
Sbjct: 257 QSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARR 316

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTA 391
           IF  + E + V+SW AM+ G+ ++G     +  F  M  E  V+P+  T   +L+ 
Sbjct: 317 IFDTLHE-RTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSG 371



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 137/251 (54%), Gaps = 5/251 (1%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY K D     + +FD  P+RN V +  ++  Y +     +AL+LF+ + R G      T
Sbjct: 102 FYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFT 161

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            ++VL +C      V GRQ+H   +K  +   V V +SL+D+Y +   + + R +F  + 
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E +VVS T+++SGYA+  +++  LELF R+Q EG++ N  T+++VL  L+    +    Q
Sbjct: 222 ERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQ 281

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH  ++++       + N+LI MY K   +  AR +FD + +R  I+WN+M+ GY  +  
Sbjct: 282 VHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGE 341

Query: 261 HMEAFETFNNM 271
             E  E FN M
Sbjct: 342 GREVLELFNLM 352


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/747 (34%), Positives = 421/747 (56%), Gaps = 22/747 (2%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D  ++  ++ +Y +  + ED R+VFD + + N  SW+ L+  Y +N M    LE++  M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
            + I  +++T S+VL        V     V     + G E    V  +LI ++ K   + 
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 232 DARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           +A +VF  M   RD I+  +M+  YV +  +  A +T+  M   G E    T+ +++  C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           ++   L   + +H  +L++    + ++R  L+  Y+KCG ++D+  +F  M ++KDVVSW
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTM-DVKDVVSW 239

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
            AMI+ +   G    A + F +M   G  P+ +T+S IL A  +    +    +H  I  
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
             +++ F++   L++ + + G L+ A + F  I++K++ AW+ MLA YAQ    + A+ +
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           Y+ +  EG  P+ FTFSSV+++C A   A+ +GK  H CS        + + +ALV MY+
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSC-ASLGALREGKFIHECSTSCGFEKDVILGTALVNMYA 418

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G++  A + F     +D+VSW++MI   AQHGH ++ALE+   M  Q +  + +T   
Sbjct: 419 KCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASS 478

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V+ AC+H G + EG  YF  +  +  I    E+    +DL  RAG L++A  +++ MPF 
Sbjct: 479 VLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFK 538

Query: 647 ASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
            S     T+L  C              R+++L+P +   YVLL+NMYAA G W + A++R
Sbjct: 539 VSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLR 598

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA-GYKPDT 751
           + M  + VK++ G S IE ++K Y F  GD S+P++ +I ++LE L +R+K+  GY PDT
Sbjct: 599 RYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDT 658

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
             V  D+ D+ KE +L  HSE++A+ FGL+ +P G+ L+I+KNLRVC DCHTV KL SK+
Sbjct: 659 RDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASKI 718

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             R I+VRD  RFHHF+ G+CSCGDYW
Sbjct: 719 TGRRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 286/547 (52%), Gaps = 7/547 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR  QRN   ++ L+  Y +++++QEAL ++  + R  + +   TLSSVL  C  L
Sbjct: 22  RQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKL 81

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
            D   GR V  +  + GF +DV V+TSL+ L+ +   +E+   VF  M    +++S T++
Sbjct: 82  LDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAM 141

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +  Y R+  ND  L+ + +M+ +G++P++FT++ +LG  +    +     +H  ++++  
Sbjct: 142 IGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKH 201

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
               SV NALI+MY K   ++D++++F  M+ +D ++WN+M+A Y       +AF  F+ 
Sbjct: 202 FGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHR 261

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G      TF S++  CA+ K L   R LH ++   G D D  ++  L+  +++CG 
Sbjct: 262 MCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGS 321

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A + F  + E K++ +W  M++ + Q      A+  +  M  EG  P+ FT+S ++ 
Sbjct: 322 LESARRYFYSI-EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVD 380

Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +  ++   +    +H       +EK   +GTAL+N Y K G L +A K F+ I  KD+V+
Sbjct: 381 SCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVS 440

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           WSAM+A  AQ G  E A+++   +  +G+  NE T SSV++AC+      E    F   S
Sbjct: 441 WSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLS 500

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
               +      +   + +  + G ++ A  V      K   V+  +++ G   HG  ++ 
Sbjct: 501 QDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRG 560

Query: 566 LEVFKEM 572
             + K +
Sbjct: 561 KALTKRI 567



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 1/329 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  +SLF     ++ V +N ++  Y      ++A +LF  +  LG      T SS+L  C
Sbjct: 222 KDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGAC 281

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   GR +H      GF RD  +  +L+ ++ R  ++E  RR F  + +  + +W 
Sbjct: 282 ASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWN 341

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++L+ YA+       L L+  M +EG  P+ FTFS+V+   A  G +     +H      
Sbjct: 342 TMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSC 401

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G E    +  AL++MY K   + DA+  FDG+ ++D ++W++M+A    +    EA E  
Sbjct: 402 GFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELS 461

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSK 327
           + M L G      T  SV+  C+    L         + ++ GI+ D     G +    +
Sbjct: 462 HLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGR 521

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISG 356
            G +++A  +   M      V+   ++ G
Sbjct: 522 AGWLKEAEHVLHTMPFKVSFVALVTLLGG 550


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 282/839 (33%), Positives = 433/839 (51%), Gaps = 100/839 (11%)

Query: 24  SPFYSKKDQSLFDRSPQRNF----VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           SP +S         +P R       +YN  +  +C+    + A+ L    ++  L     
Sbjct: 43  SPIFSSCIPIRISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELET--K 100

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T SSVL+ C  L     G++VH     +    D  +   LV  Y    ++++GRRVFD M
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATA 198
            + NV  W  ++S YA                    K   F  S  L  ++ ++GI    
Sbjct: 161 EKKNVYLWNFMVSEYA--------------------KIGDFKESICLFKIMVEKGI---- 196

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
                                      + K    A  +FD + DRD I+WNSM++GYV+N
Sbjct: 197 ---------------------------EGKRPESAFELFDKLCDRDVISWNSMISGYVSN 229

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            L       +  M   G ++  +T +SV+  CA +  L L + +HS  +K+  +   N  
Sbjct: 230 GLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  YSKCG ++ A ++F  M E ++VVSWT+MI+G+ ++G  D A+    QM +EGV
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348

Query: 379 RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           + +    + IL A            VH +I   N E +  V  AL++ Y K G ++ A  
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VF  +  KDI++W+ M      IG+               +KP+  T + V+ AC + SA
Sbjct: 409 VFSTMVVKDIISWNTM------IGE---------------LKPDSRTMACVLPACASLSA 447

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +E+GK+ H   ++   ++   V++ALV +Y K G +  A  +F     +DLVSW  MI 
Sbjct: 448 -LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIA 506

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY  HG+  +A+  F EMR   +E D ++FI ++ AC+H+GL+++G ++F IM N+ +I 
Sbjct: 507 GYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIE 566

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------R 660
           P +EHY+CMVDL SR G L KA + I  +P A  AT+W  +L  C              R
Sbjct: 567 PKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAER 626

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           +  L+P +S  YVLL+N+YA    W+E  R+R+ +  + ++K  G SWIE+K K   F++
Sbjct: 627 VFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVS 686

Query: 721 G-DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
           G + SHP S  I S L+++  ++K+ G+ P T Y L + D+  KE  L  HSE+LA+AFG
Sbjct: 687 GNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFG 746

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+  P    +++ KNLRVCGDCH + K +SK  RR+IV+RD NRFHHFK+G CSC  +W
Sbjct: 747 LLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/572 (41%), Positives = 361/572 (63%), Gaps = 21/572 (3%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           +++LCA T+     R  H+Q+++ G++ D      L+  YSKC  ++ A K F+ M  +K
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEM-PVK 107

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT----AQPAVSPFQVH 401
            +VSW  +I    QN     A+    QM REG   N FT S +L         +   Q+H
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLH 167

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           A  IK   + +  VGTALL+ Y K   + +A+++FE + EK+ V WS+M+AGY Q G  E
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+ I+R     G   + F  SS ++AC   +  +E GKQ HA S K+   + + VSS+L
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIE-GKQVHAISHKSGFGSNIYVSSSL 286

Query: 522 VTMYSKKGNIESASEVFKRQRK-RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           + MY+K G I  A  VF+   + R +V WN+MI G+A+H    +A+ +F++M+++    D
Sbjct: 287 IDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPD 346

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            +T++ V+ AC+H GL +EGQ+YFD+MV +H++ P++ HYSCM+D+  RAG++ KA D+I
Sbjct: 347 DVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLI 406

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
            RMPF A++++W ++LA+C+              L  ++P+++  ++LL+N+YAA   W 
Sbjct: 407 ERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWD 466

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           E AR RKL+ +  V+KE G SWIE+KNK +SF  G+ +HPQ + IY+KL+ L   LK   
Sbjct: 467 EVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLN 526

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           YK DTS  L D+++  K+ +L  HSE+LAI FGL+  P   P++I+KNLR+CGDCHT +K
Sbjct: 527 YKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMK 586

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+SK   R+I+VRDTNRFHHFK+G CSCG++W
Sbjct: 587 LVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 163/313 (52%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           S L  +L+ C      + GR  H + ++ G   D+  S  L+++Y + + V+  R+ F++
Sbjct: 44  SNLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNE 103

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M   ++VSW +++    +N  +   L+L  +MQ EG   N FT S+VL   A +  +   
Sbjct: 104 MPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILEC 163

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +Q+H   IK   +    V  AL+ +Y K   ++DA  +F+ M +++++TW+SM+AGYV N
Sbjct: 164 MQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 223

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
             H EA   F N  L G +       S +  CA    L   +Q+H+   K+G   +  + 
Sbjct: 224 GFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVS 283

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           + L+  Y+KCG + +A  +F  + E++ +V W AMISG  ++     A+  F +M + G 
Sbjct: 284 SSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGF 343

Query: 379 RPNGFTYSIILTA 391
            P+  TY  +L A
Sbjct: 344 FPDDVTYVCVLNA 356



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 134/260 (51%), Gaps = 5/260 (1%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F+  P ++ V +N ++    +++  +EAL L + ++R G P    T+SSVL  C C F  
Sbjct: 101 FNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVL--CNCAFKC 158

Query: 95  VF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
                 Q+H   +K+    +  V T+L+ +Y + ++++D  ++F+ M E N V+W+S+++
Sbjct: 159 AILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMA 218

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY +N  ++  L +F   Q+ G   + F  S+ +   A    +    QVH +  K+G   
Sbjct: 219 GYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGS 278

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDG-MEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              V ++LI MY K   +R+A  VF G +E R  + WN+M++G+  +    EA   F  M
Sbjct: 279 NIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKM 338

Query: 272 GLAGAELTRSTFVSVIKLCA 291
              G      T+V V+  C+
Sbjct: 339 QQRGFFPDDVTYVCVLNACS 358



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 118/232 (50%), Gaps = 8/232 (3%)

Query: 28  SKKDQS-LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           S KD S +F+  P++N V ++ ++  Y ++  H+EAL +F   + +G       +SS + 
Sbjct: 194 SIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVS 253

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVV 145
            C  L   + G+QVH    KSGF  ++ VS+SL+D+Y +   + +   VF  + E  ++V
Sbjct: 254 ACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIV 313

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
            W +++SG+AR+      + LF +MQ  G  P+  T+  VL   +  G+     +   ++
Sbjct: 314 LWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLM 373

Query: 206 IKN---GGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           ++       V+   C  +I +  ++ +V  A  + + M  +  S  W S++A
Sbjct: 374 VRQHNLSPSVLHYSC--MIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLA 423


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 264/695 (37%), Positives = 398/695 (57%), Gaps = 42/695 (6%)

Query: 177 PNSFTFSTVLGVLADE----GI----VATAV--QVHTMVIKNGGEVVTSVCNALISMYLK 226
           P+SF+F+     LA      GI     A+A    +H + + +G      V +AL  +Y  
Sbjct: 111 PDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFT 170

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST-FVS 285
                DAR VFD +   D++ WN+++AG   +E    A E F  M  AG+    ST   S
Sbjct: 171 LSRGNDARKVFDAVPSPDTVLWNTLLAGLSGSE----ALEAFVRMAGAGSVRPDSTTLAS 226

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+   A      + R +H+   K G+    ++ TGL+  Y+KCG ME A  +F  M E  
Sbjct: 227 VLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRM-EGP 285

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ------ 399
           D+V++ A+ISG+  NG +  +V  F ++   G+RP+  T   ++   P  SPF       
Sbjct: 286 DLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALI---PVHSPFGHEPLAG 342

Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            +HAH++K   + +  V TAL   Y +   +D A + F+ + EK + +W+AM++GYAQ G
Sbjct: 343 CLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNG 402

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            TE AV +++Q+ +  V+PN  T SS ++AC A   A+  GK  H      KL   + V 
Sbjct: 403 LTEMAVALFQQMQALNVRPNPLTISSALSAC-AQLGALSLGKWVHKIIANEKLELNVYVM 461

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +AL+ MY K G+I  A  +F     +++VSWN MI GY  HG   +AL+++K+M    L 
Sbjct: 462 TALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLH 521

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
               TF+ V+ AC+H GLV EG   F  M +++ I P +EH +CMVDL  RAG L++A +
Sbjct: 522 PTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFE 581

Query: 639 IINRMPFAA-SATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATG 683
           +I+  P +A    +W  +L AC              +L  L+P ++  YVLLSN+Y +  
Sbjct: 582 LISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKK 641

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            + E A VR+    RK+ K  G + IE+ ++ + F+AGD +HPQS+ IY  LE+L+ ++ 
Sbjct: 642 QYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMI 701

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
           +AGY+PDT   L D+++E KE ++  HSE+LAIAFGL+ T  G  ++I+KNLRVC DCH 
Sbjct: 702 EAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHN 761

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             K+ISK+ +R IVVRD +RFHHF++G+CSCGDYW
Sbjct: 762 ATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/451 (31%), Positives = 222/451 (49%), Gaps = 10/451 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R +H   V SGFA D  V+++L  LY   +   D R+VFD +   + V W +LL+G +  
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS-- 200

Query: 158 KMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                 LE F RM   G ++P+S T ++VL   A+         VH    K G      V
Sbjct: 201 --GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
              LIS+Y K   +  AR +FD ME  D +T+N++++GY  N +   + E F  +   G 
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
             + ST V++I + +      LA  LH+ V+K G+D +  + T L   Y +   M+ A +
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
            F  M E K + SW AMISG+ QNG  ++AV  F QM    VRPN  T S  L+A   + 
Sbjct: 379 AFDAMPE-KTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                  VH  I     E +  V TAL++ YVK G + EA  +F+ +D K++V+W+ M++
Sbjct: 438 ALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMIS 497

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GY   G    A+K+Y+ +    + P   TF SV+ AC+      E    F + +    + 
Sbjct: 498 GYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGIT 557

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRK 543
             +   + +V +  + G ++ A E+     K
Sbjct: 558 PGIEHCTCMVDLLGRAGQLKEAFELISEFPK 588



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 173/361 (47%), Gaps = 6/361 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCGC 90
           + +FD  P  + V +N LL          EAL  F+ +   G +    +TL+SVL     
Sbjct: 178 RKVFDAVPSPDTVLWNTLLAGLSG----SEALEAFVRMAGAGSVRPDSTTLASVLPAAAE 233

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           + +   GR VH    K G A+  +V T L+ LY +  ++E  R +FD M   ++V++ +L
Sbjct: 234 VANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNAL 293

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SGY+ N M    +ELF  +   G++P+S T   ++ V +  G    A  +H  V+K G 
Sbjct: 294 ISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGL 353

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    V  AL ++Y +   +  AR  FD M ++   +WN+M++GY  N L   A   F  
Sbjct: 354 DANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQ 413

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M          T  S +  CA    L L + +H  +    ++ +  + T L+  Y KCG 
Sbjct: 414 MQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGS 473

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           + +A  IF  M + K+VVSW  MISG+  +G    A+  +  M    + P   T+  +L 
Sbjct: 474 IAEARCIFDSM-DNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLY 532

Query: 391 A 391
           A
Sbjct: 533 A 533



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 137/258 (53%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFDR    + V YN L+  Y  + +   ++ LF  +  +GL    STL +++        
Sbjct: 278 LFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGH 337

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                 +H   VK+G   +  VST+L  LY R N+++  RR FD M E  + SW +++SG
Sbjct: 338 EPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISG 397

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+N + +  + LF +MQ   ++PN  T S+ L   A  G ++    VH ++     E+ 
Sbjct: 398 YAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELN 457

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  ALI MY+K   + +AR +FD M++++ ++WN M++GY  +    EA + + +M  
Sbjct: 458 VYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMD 517

Query: 274 AGAELTRSTFVSVIKLCA 291
           A    T STF+SV+  C+
Sbjct: 518 AHLHPTSSTFLSVLYACS 535


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/747 (33%), Positives = 413/747 (55%), Gaps = 56/747 (7%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD      ++  Y    N+ + R++F++    N ++W+SL+SGY +N      L  F +M
Sbjct: 66  RDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQM 125

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             +G KP+ +T  +VL   +   ++ T   +H   IK   E    V   L+ MY K K +
Sbjct: 126 WSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCL 185

Query: 231 RDARAVFDGMEDRDS-ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            +A  +F  + DR + + W +M+ GY  N   ++A + F  M   G E    TF S++  
Sbjct: 186 LEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTA 245

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C +       RQ+H  ++ +G   +  +++ L+  Y+KCG +  A  I   M E+ DVV 
Sbjct: 246 CTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTM-EIDDVVC 304

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHII 405
           W +MI G + +G ++ A+  F +M    +R + FTY  +L +  +    +    VH+  I
Sbjct: 305 WNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTI 364

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           KT ++   +V  AL++ Y K+G L  A  VF  I +KD+++W++++ GY   G  E A++
Sbjct: 365 KTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQ 424

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++  + +  V  ++F  + V +AC A    +E G+Q HA  IK+   + L   ++L+TMY
Sbjct: 425 LFCDMRTARVDLDQFVVACVFSAC-AELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           +K                          CG  +      A+ VF  M  +++    I++ 
Sbjct: 484 AK--------------------------CGCLE-----DAIRVFDSMETRNV----ISWT 508

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
            +I      GLV+ GQ YF+ M   + I P  +HY+CM+DL  RAG + +A  ++NRM  
Sbjct: 509 AIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDV 568

Query: 646 AASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARV 691
              AT+W+++L+ACR              LI L+P +S  YVLLSNM++  G W++ A +
Sbjct: 569 EPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHI 628

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           R+ M    + KE GYSWIE+K++ ++F++ D SHP + +IYSK++E+   +K+AG+ PD 
Sbjct: 629 RRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDM 688

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           ++ L+D+D+E KE  L+ HSE+LA+AFGL+    GAP++I KNLRVCGDCH+ +K IS +
Sbjct: 689 NFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSI 748

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +R I++RD N FHHF EG CSCGD+W
Sbjct: 749 FKRHIILRDLNCFHHFIEGKCSCGDFW 775



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 242/462 (52%), Gaps = 7/462 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF+ +P +N + ++ L+  YC++    E L  F  +   G      TL SVL+ C  L
Sbjct: 88  RKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTL 147

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVSWTSL 150
                G+ +HC  +K     ++ V+T LVD+Y +   + +   +F  + +  N V WT++
Sbjct: 148 SLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAM 207

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           L+GYA+N  + + ++ F  M+ +G++ N FTF ++L         A   QVH  +I +G 
Sbjct: 208 LTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGF 267

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V +AL+ MY K   +  AR + D ME  D + WNSM+ G VT+    EA   F+ 
Sbjct: 268 GPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHK 327

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M      +   T+ SV+K  A+ K L++   +HS  +K G D    +   L+  Y+K G 
Sbjct: 328 MHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGN 387

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +  A  +F+ + + KDV+SWT++++G++ NG  + A+  FC M    V  + F  + + +
Sbjct: 388 LSCALDVFNKILD-KDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFS 446

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   ++      QVHA+ IK++     S   +L+  Y K G L++A +VF+ ++ +++++
Sbjct: 447 ACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVIS 506

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVIN 487
           W+A++ GYAQ G  E     +  +    G+KP    ++ +I+
Sbjct: 507 WTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMID 548



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 241/465 (51%), Gaps = 45/465 (9%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWN---------------------------- 249
           N L+S   K+  V +AR +FD M  RD  TWN                            
Sbjct: 41  NQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSI 100

Query: 250 ---SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
              S+V+GY  N   +E    F+ M   G + ++ T  SV++ C+T   L   + +H   
Sbjct: 101 TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYA 160

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +K  ++ +  + TGL+  YSKC  + +A  +F  + + K+ V WTAM++G+ QNG    A
Sbjct: 161 IKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKA 220

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
           +  F +M  +G+  N FT+  ILTA  ++S +    QVH  II + +  +  V +AL++ 
Sbjct: 221 IQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDM 280

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G L  A  + + ++  D+V W++M+ G    G  E A+ ++ ++ +  ++ ++FT+
Sbjct: 281 YAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTY 340

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            SV+ +  A    ++ G+  H+ +IK   +    VS+ALV MY+K+GN+  A +VF +  
Sbjct: 341 PSVLKS-LASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKIL 399

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D++SW S++ GY  +G  +KAL++F +MR   ++ D      V +AC    +++ G+Q
Sbjct: 400 DKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQ 459

Query: 603 YFDIMVNEHHIYPT----MEHYSCMVDLYSRAGMLEKAMDIINRM 643
                V+ + I  +    +   + ++ +Y++ G LE A+ + + M
Sbjct: 460 -----VHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSM 499



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 224/447 (50%), Gaps = 6/447 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            F    ++N+V++  +L  Y ++    +A+  F  +R  G+     T  S+L  C  +  
Sbjct: 192 FFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISA 251

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           + FGRQVH   + SGF  +V V ++LVD+Y +  ++   R + D M   +VV W S++ G
Sbjct: 252 YAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVG 311

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              +   +  L LFH+M    I+ + FT+ +VL  LA    +     VH++ IK G +  
Sbjct: 312 CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDAC 371

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +V NAL+ MY K   +  A  VF+ + D+D I+W S+V GYV N  H +A + F +M  
Sbjct: 372 KTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRT 431

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           A  +L +     V   CA    +   RQ+H+  +K+      +    L+  Y+KCG +ED
Sbjct: 432 ARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLED 491

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQ 392
           A ++F  M E ++V+SWTA+I G+ QNG ++   ++F  M +  G++P    Y+ ++   
Sbjct: 492 AIRVFDSM-ETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLL 550

Query: 393 PAVSPFQVHAHII-KTNYEKSFSVGTALLNAYVKKGIL---DEAAKVFELIDEKDIVAWS 448
                     H++ + + E   ++  +LL+A    G L   + A K    ++  + + + 
Sbjct: 551 GRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYV 610

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGV 475
            +   ++  G  E A  I R + + G+
Sbjct: 611 LLSNMFSVAGRWEDAAHIRRAMKTMGI 637



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 35/273 (12%)

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR---------- 468
           LL+   K G +DEA K+F+ +  +D   W+ M++ YA +G+   A K++           
Sbjct: 43  LLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITW 102

Query: 469 ---------------------QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
                                Q+ S+G KP+++T  SV+ AC+  S  +  GK  H  +I
Sbjct: 103 SSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLS-LLHTGKMIHCYAI 161

Query: 508 KAKLNNALCVSSALVTMYSK-KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           K +L   + V++ LV MYSK K  +E+    F    +++ V W +M+ GYAQ+G + KA+
Sbjct: 162 KIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAI 221

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           + FKEMR Q +E +  TF  ++TACT       G+Q    ++      P +   S +VD+
Sbjct: 222 QCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCII-WSGFGPNVYVQSALVDM 280

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           Y++ G L  A  I++ M        W +++  C
Sbjct: 281 YAKCGDLASARMILDTMEI-DDVVCWNSMIVGC 312



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           S+ L++  SK G ++ A ++F +   RD  +WN MI  YA  G+  +A ++F E   +  
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIK-- 97

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIM 607
             + IT+  +++     G   EG + F  M
Sbjct: 98  --NSITWSSLVSGYCKNGCEVEGLRQFSQM 125


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/825 (32%), Positives = 443/825 (53%), Gaps = 32/825 (3%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGCLF 92
            +FD    +N  ++N ++  Y R+ L+ E L  F+  I    L     T   V+K C  + 
Sbjct: 497  VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 556

Query: 93   DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            D   G  VH   VK+G   DV V  +LV  Y     V D  ++FD M E N+VSW S++ 
Sbjct: 557  DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 616

Query: 153  GYARNKMNDRVLELFHRMQVE----GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
             ++ N  ++    L   M  E       P+  T  TVL V A E  +     VH   +K 
Sbjct: 617  VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 676

Query: 209  GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
              +    + NAL+ MY K   + +A+ +F    +++ ++WN+MV G+         F+  
Sbjct: 677  RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 736

Query: 269  NNMGLAGAELTRS---TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
              M LAG E  ++   T ++ + +C     L   ++LH   LK    ++  +    + +Y
Sbjct: 737  RQM-LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 795

Query: 326  SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            +KCG +  A ++F  +R  K V SW A+I GH Q+    L+++   QM   G+ P+ FT 
Sbjct: 796  AKCGSLSYAQRVFHGIRS-KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 854

Query: 386  SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
              +L+A   +       +VH  II+   E+   V  ++L+ Y+  G L     +F+ +++
Sbjct: 855  CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 914

Query: 442  KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA-PSAAVEQGK 500
            K +V+W+ ++ GY Q G  + A+ ++RQ+   G++    +   V  AC+  PS  +  G+
Sbjct: 915  KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS--LRLGR 972

Query: 501  QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
            + HA ++K  L +   ++ +L+ MY+K G+I  +S+VF   +++   SWN+MI GY  HG
Sbjct: 973  EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 1032

Query: 561  HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
              K+A+++F+EM+R     D +TF+GV+TAC H+GL+ EG +Y D M +   + P ++HY
Sbjct: 1033 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 1092

Query: 621  SCMVDLYSRAGMLEKAMDII-NRMPFAASATVWRTVLAACR--------------LISLQ 665
            +C++D+  RAG L+KA+ ++   M   A   +W+++L++CR              L  L+
Sbjct: 1093 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 1152

Query: 666  PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
            P     YVLLSN+YA  G W++  +VR+ MN+  ++K+AG SWIE+  K +SF+ G+   
Sbjct: 1153 PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFL 1212

Query: 726  PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
                +I S    L  ++   GY+PDT  V  D+ +E K   L  HSE+LA+ +GL+ T  
Sbjct: 1213 DGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSE 1272

Query: 786  GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
            G  +++ KNLR+C DCH   KLISK+  R+IVVRD  RFHHFK G
Sbjct: 1273 GTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 168/597 (28%), Positives = 292/597 (48%), Gaps = 24/597 (4%)

Query: 76   LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNV-STSLVDLYMRTNNVEDGRR 134
            L    L  +L+  G   D   GR++H     S   R+ +V  T ++ +Y    + +D R 
Sbjct: 437  LVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 496

Query: 135  VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEG 193
            VFD +   N+  W +++S Y+RN++ D VLE F  M     + P+ FT+  V+   A   
Sbjct: 497  VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 556

Query: 194  IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
             V   + VH +V+K G      V NAL+S Y     V DA  +FD M +R+ ++WNSM+ 
Sbjct: 557  DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 616

Query: 254  GYVTNELHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
             +  N    E+F     M    G        +T V+V+ +CA  +E+ L + +H   +K 
Sbjct: 617  VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 676

Query: 310  GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
             +D +  +   LM  YSKCG + +A  IF  M   K+VVSW  M+ G    G      + 
Sbjct: 677  RLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDV 735

Query: 370  FCQMTREG--VRPNGFTYSIILTAQPAV-------SPFQVHAHIIKTNYEKSFSVGTALL 420
              QM   G  V+ +  T   IL A P         S  ++H + +K  +  +  V  A +
Sbjct: 736  LRQMLAGGEDVKADEVT---ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFV 792

Query: 421  NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
             +Y K G L  A +VF  I  K + +W+A++ G+AQ  D   ++  + Q+   G+ P+ F
Sbjct: 793  ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 852

Query: 481  TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
            T  S+++AC+    ++  GK+ H   I+  L   L V  +++++Y   G + +   +F  
Sbjct: 853  TVCSLLSACSK-LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 911

Query: 541  QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
               + LVSWN++I GY Q+G   +AL VF++M    ++  GI+ + V  AC+    +  G
Sbjct: 912  MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 971

Query: 601  QQYFDIMVNEHHIYPTMEHYSC-MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
            ++     +   H+       +C ++D+Y++ G + ++  + N +   ++A+ W  ++
Sbjct: 972  REAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMI 1025



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 158/327 (48%), Gaps = 4/327 (1%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            Q +F     +    +N L+  + + +  + +L+  L ++  GL     T+ S+L  C  L
Sbjct: 805  QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 864

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 G++VH   +++   RD+ V  S++ LY+    +   + +FD M + ++VSW +++
Sbjct: 865  KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 924

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            +GY +N   DR L +F +M + GI+    +   V G  +    +    + H   +K+  E
Sbjct: 925  TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 984

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                +  +LI MY K+  +  +  VF+G++++ + +WN+M+ GY  + L  EA + F  M
Sbjct: 985  DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 1044

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKCG 329
               G      TF+ V+  C  +  +    +   Q +K+      N++    ++    + G
Sbjct: 1045 QRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ-MKSSFGLKPNLKHYACVIDMLGRAG 1103

Query: 330  KMEDASKIFS-MMREMKDVVSWTAMIS 355
            +++ A ++ +  M E  DV  W +++S
Sbjct: 1104 QLDKALRVVAEEMSEEADVGIWKSLLS 1130


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/648 (39%), Positives = 383/648 (59%), Gaps = 32/648 (4%)

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T V +AL  +Y     V  AR VFD +   D++ WN+++AG   +E    A E+F  M  
Sbjct: 149 TFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSE----AVESFARMVC 204

Query: 274 AGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            G+     +T  SV+   A   ++ + R +HS   K G+    ++ TGL+  YSKCG +E
Sbjct: 205 DGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVE 264

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A  +F MM E  D+V++ A+ISG+  NG +  +VN F ++   G+ PN  T   ++   
Sbjct: 265 SARCLFDMM-EKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALI--- 320

Query: 393 PAVSPFQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           P  SPF        +H  ++K+ +  +  V TA+   + +   ++ A K F+ + EK + 
Sbjct: 321 PVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTME 380

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AM++GYAQ G TE AV ++ Q+    V+PN  T SS ++AC A   A+  GK  H  
Sbjct: 381 SWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSAC-AQLGALSLGKWLHRI 439

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
             +  L   + V +AL+ MY+K G+I  A  +F     +++VSWN+MI GY  HG   +A
Sbjct: 440 ITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEA 499

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L+++K+M    L     TF+ V+ AC+H GLV+EG + F  M +++ I P +EH +CMVD
Sbjct: 500 LKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVD 559

Query: 626 LYSRAGMLEKAMDIINRMPFAA-SATVWRTVLAAC--------------RLISLQPHDSA 670
           L  RAG L++A ++I+  P +A    VW  +L AC              +L  L P +S 
Sbjct: 560 LLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSG 619

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YVLLSN++ +   + E A VR+    RK+ K  GY+ IE+ NK + F+AGD +HPQS  
Sbjct: 620 YYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEA 679

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           IYS LE+L+ ++ +AGY+P+T   L D+++E KE ++  HSE+LAIAFGL++T  G  ++
Sbjct: 680 IYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIR 739

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           I+KNLRVC DCH   K ISK+ +R IVVRD +RFHHF++G+CSCGDYW
Sbjct: 740 IIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 233/477 (48%), Gaps = 12/477 (2%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D  V+++L  LY   + V+  R+VFD +   + V W +LL+G +        +E F RM 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMV 203

Query: 172 VEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
            +G ++P++ T ++VL   A+   V     VH+   K G      V   LIS+Y K   V
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             AR +FD ME  D + +N++++GY  N +   +   F  +   G     ST V++I + 
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           +      LA+ LH  VLK+G   +  + T +   + +   ME A K F  M E K + SW
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPE-KTMESW 382

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
            AMISG+ QNG  ++AV  F QM +  VRPN  T S  L+A   +        +H  I +
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITE 442

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
            + E +  V TAL++ Y K G + EA ++F  +D K++V+W+AM+AGY   G    A+K+
Sbjct: 443 EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKL 502

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           Y+ +    + P   TF SV+ AC+      E  K F + +    +N  +   + +V +  
Sbjct: 503 YKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLG 562

Query: 527 KKGNIESASEVFKRQRKRDLVS--WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + G ++ A E+     K  +    W +++     H  +  A    +++   D E  G
Sbjct: 563 RAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSG 619



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 158/314 (50%), Gaps = 1/314 (0%)

Query: 78  GSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
            +TL+SVL     + D   GR VH    K G A   +V T L+ LY +  +VE  R +FD
Sbjct: 212 ATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFD 271

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            M + ++V++ +L+SGY+ N M    + LF  +   G+ PNS T   ++ V +  G    
Sbjct: 272 MMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLL 331

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           A  +H  V+K+G    + V  A+ +++ +   +  AR  FD M ++   +WN+M++GY  
Sbjct: 332 AQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQ 391

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           N L   A   F  M          T  S +  CA    L L + LH  + +  ++ +  +
Sbjct: 392 NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYV 451

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            T L+  Y+KCG + +A +IF+ M + K+VVSW AMI+G+  +G    A+  +  M    
Sbjct: 452 MTALIDMYAKCGSISEARRIFNTM-DNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAH 510

Query: 378 VRPNGFTYSIILTA 391
           + P   T+  +L A
Sbjct: 511 LLPTSATFLSVLYA 524



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 141/260 (54%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD   + + V YN L+  Y  + +   ++NLF  +  LGL    STL +++      
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF 326

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              +  + +H   +KSGF  +  VST++  L+ R N++E  R+ FD M E  + SW +++
Sbjct: 327 GHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMI 386

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+N + +  + LF +M    ++PN  T S+ L   A  G ++    +H ++ +   E
Sbjct: 387 SGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLE 446

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V  ALI MY K   + +AR +F+ M++++ ++WN+M+AGY  +    EA + + +M
Sbjct: 447 PNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM 506

Query: 272 GLAGAELTRSTFVSVIKLCA 291
             A    T +TF+SV+  C+
Sbjct: 507 LDAHLLPTSATFLSVLYACS 526



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 86/167 (51%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD  P++    +N ++  Y ++ L + A+ LF  + +L +     T+SS L  C  L   
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+ +H    +     +V V T+L+D+Y +  ++ + RR+F+ M+  NVVSW ++++GY
Sbjct: 431 SLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGY 490

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
             +      L+L+  M    + P S TF +VL   +  G+V    +V
Sbjct: 491 GLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKV 537


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/747 (34%), Positives = 422/747 (56%), Gaps = 21/747 (2%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           SLF   P  + V +N LL  YC+  + ++++ L + + R G+    +TL+ +LK CG L 
Sbjct: 91  SLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLE 150

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   G Q+H   VK+G   DV   ++LVD+Y +  ++ED  R F  M E N VSW + ++
Sbjct: 151 DLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIA 210

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N+   R LELF +MQ  G+  +   +++V    A    ++TA Q+H   IKN    
Sbjct: 211 GCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSA 270

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  A++ +Y K+  + DAR  F  + +      N+M+ G V   L  EA + F  M 
Sbjct: 271 DRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMT 330

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +G      +   V   CA  K      Q+H   +K+G D D  +R  ++  Y KC  + 
Sbjct: 331 RSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALV 390

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  +F  M E +D VSW A+I+   QN   +  + +  +M R G+ P+ FTY  +L A 
Sbjct: 391 EAYLVFQEM-EQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKAC 449

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +   +    VH   IK+       V + +++ Y K G++ EA K+ + I  +++V+W+
Sbjct: 450 AGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWN 509

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           ++++G++    +E A K + ++   GVKP+ FT+++V++ C A  A +E GKQ H   IK
Sbjct: 510 SIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTC-ANLATIELGKQIHGQIIK 568

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            ++     +SS LV MY+K GN+  +  +F++ +K D VSWN+MICGYA HG   +ALE+
Sbjct: 569 QEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEM 628

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M++ ++  +  TF+ V+ AC+H GL+D+G +YF +M + + + P +EH++CMVD+  
Sbjct: 629 FERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILG 688

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           R+   ++A+  I  MP  A A +W+T+L+ C++              + L P DS++Y+L
Sbjct: 689 RSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYIL 748

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA +G W + +R R+LM   ++KKE G SWIEV+++ + FLAGD  HP+S ++Y  
Sbjct: 749 LSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEM 808

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDE 761
           L  L   +K +GY+P  S +  ++D+E
Sbjct: 809 LNNLIVEMKLSGYEP-ASALFAEVDEE 834



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/587 (28%), Positives = 281/587 (47%), Gaps = 49/587 (8%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD------------------- 137
           G+  H   + SGF     VS  L+ +Y R       R VFD                   
Sbjct: 23  GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAH 82

Query: 138 ------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
                        M + +VVSW +LLSGY +  M    + L   M   G+ P+  T + +
Sbjct: 83  AGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVL 142

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L        +A  VQ+H + +K G E+     +AL+ MY K + + DA   F GM +R+S
Sbjct: 143 LKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNS 202

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           ++W + +AG V NE +    E F  M   G  +++  + SV + CA    L  ARQLH+ 
Sbjct: 203 VSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAH 262

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
            +KN    D  + T ++  Y+K   + DA + F  +     V +  AM+ G ++ G    
Sbjct: 263 AIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPN-HTVQACNAMMVGLVRTGLGAE 321

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLN 421
           A+  F  MTR G+  +  + S + +A   V  +    QVH   IK+ ++    V  A+L+
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            Y K   L EA  VF+ ++++D V+W+A++A   Q    E  +    ++   G++P++FT
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           + SV+ AC A   ++E G   H  +IK+ L     VSS +V MY K G I  A ++  R 
Sbjct: 442 YGSVLKAC-AGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRI 500

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
             ++LVSWNS+I G++ +  +++A + F EM    ++ D  T+  V+  C +   ++ G+
Sbjct: 501 GGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGK 560

Query: 602 QYFDIMVNEHHIYPTMEHY--SCMVDLYSRAG-------MLEKAMDI 639
           Q    ++ +  +    + Y  S +VD+Y++ G       M EKA  +
Sbjct: 561 QIHGQIIKQEML---GDEYISSTLVDMYAKCGNMPDSLLMFEKAQKL 604



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 236/504 (46%), Gaps = 48/504 (9%)

Query: 181 TFSTVLGVLADEG--IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           TFS +  + A  G   +AT    H  ++ +G    T V N L+ MY +      AR VFD
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-------------------------GL 273
            M  RD+++WN+M+  Y        A   F  M                         GL
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 274 A------GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           +      G    R+T   ++K C   ++L L  Q+H+  +K G++ D    + L+  Y K
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           C  +EDA + F  M E ++ VSW A I+G +QN      +  F QM R G+  +   Y+ 
Sbjct: 184 CRSLEDALRFFHGMGE-RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +  +  A++      Q+HAH IK  +     VGTA+++ Y K   L +A + F  +    
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHT 302

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           + A +AM+ G  + G    A+++++ +T  G+  +  + S V +AC A      QG Q H
Sbjct: 303 VQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSAC-AEVKGYLQGLQVH 361

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
             +IK+  +  +CV +A++ +Y K   +  A  VF+   +RD VSWN++I    Q+   +
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH---- 619
             +    EM R  +E D  T+  V+ AC  AGL  +  +Y  + V+   I   +      
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKAC--AGL--QSLEYGSV-VHGKAIKSGLGLDAFV 476

Query: 620 YSCMVDLYSRAGMLEKAMDIINRM 643
            S +VD+Y + GM+ +A  + +R+
Sbjct: 477 SSTVVDMYCKCGMITEAQKLHDRI 500



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 134/314 (42%), Gaps = 38/314 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q L DR   +  V +N ++  +  +   +EA   F  +  +G+     T ++VL TC  L
Sbjct: 494 QKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANL 553

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H + +K     D  +S++LVD+Y +  N+ D   +F+   + + VSW +++
Sbjct: 554 ATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMI 613

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGG 210
            GYA +      LE+F RMQ   + PN  TF  VL   +  G++    +  + M  +   
Sbjct: 614 CGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKL 673

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFETFN 269
           E        ++ +  +SK  ++A      M  + D++ W ++                  
Sbjct: 674 EPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTL------------------ 715

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
                            + +C   +++ +A    S VL+   D D ++   L   Y++ G
Sbjct: 716 -----------------LSICKIRQDVEVAETAASNVLRLDPD-DSSVYILLSNVYAESG 757

Query: 330 KMEDASKIFSMMRE 343
           K  D S+   +MR+
Sbjct: 758 KWVDVSRTRRLMRQ 771



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 83/213 (38%), Gaps = 38/213 (17%)

Query: 481 TFSSVINACT-APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           TFS +   C  A  +A+  G+  HA  + +       VS+ L+ MY++ G    A  VF 
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFK----------------------------- 570
               RD VSWN+M+  YA  G T  A  +F                              
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 571 --EMRRQDLEFDGITFIGVITACTHAGLVD--EGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             EM R+ +  D  T   ++ AC   GL D   G Q   + V    +   +   S +VD+
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKAC--GGLEDLALGVQIHAVAVKT-GLEMDVRAGSALVDM 180

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           Y +   LE A+   + M    S + W   +A C
Sbjct: 181 YGKCRSLEDALRFFHGMGERNSVS-WGAAIAGC 212


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/743 (34%), Positives = 419/743 (56%), Gaps = 21/743 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKT 87
           +  + LFDR P RN V +  ++  Y +      A++LF+  ++    +     L+SVL+ 
Sbjct: 70  RDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRA 129

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C        G QVH   VK     +V V T+L++LY +   +++   VF  +     V+W
Sbjct: 130 CTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTW 189

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            ++++GYA+       LELF RM +EG++P+ F  ++ +   +  G +    Q+H    +
Sbjct: 190 NTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYR 249

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +  E  TSV N LI +Y K   +  AR +FD ME R+ ++W +M++GY+ N  + EA   
Sbjct: 250 SATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITM 309

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F NM  AG +       S++  C +   +   RQ+H+ V+K  ++ D  ++  L+  Y+K
Sbjct: 310 FWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAK 369

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           C  + +A  +F  + E  D +S+ AMI G+ +N  +  AVN F +M    +RP+  T+  
Sbjct: 370 CEHLTEARAVFDALAE-DDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVS 428

Query: 388 IL---TAQPAVS-PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L   ++Q A+    Q+H  IIK+         +AL++ Y K  ++++A  VF ++  KD
Sbjct: 429 LLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKD 488

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V W++M+ G+AQ    E A+K++ QL   G+ PNEFTF +++   +   A++  G+QFH
Sbjct: 489 MVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTL-ASMFHGQQFH 547

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A  IKA ++N   VS+AL+ MY+K G I+    +F+     D++ WNSMI  YAQHGH +
Sbjct: 548 AWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAE 607

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +AL+VF+ M   ++E + +TF+GV++AC HAG V EG  +F+ M + + I P +EHY+ +
Sbjct: 608 EALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASV 667

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLIS--------------LQPHDS 669
           V+L+ R+G L  A + I RMP   +A VWR++L+AC L                  P DS
Sbjct: 668 VNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDS 727

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             YVLLSN+YA+ G W +   +R+ M+     KE G SWIEV  + ++F+     HP++ 
Sbjct: 728 GPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAE 787

Query: 730 QIYSKLEELSTRLKDAGYKPDTS 752
            IYS L+EL++ +K+ GY PDTS
Sbjct: 788 LIYSVLDELTSLIKNLGYVPDTS 810



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 173/612 (28%), Positives = 306/612 (50%), Gaps = 39/612 (6%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H     +G   D+ ++  L+  Y     + D R +FD M   N+VSW S++S Y ++  
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99

Query: 160 NDRVLELFHRMQVEGIK-PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +D  + LF   Q    + PN F  ++VL        V+   QVH + +K   +    V  
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI++Y K   + +A  VF  +  R  +TWN+++ GY        A E F+ MG+ G   
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            R    S +  C+    L   RQ+H    ++  + D ++   L+  Y KC ++  A K+F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M E +++VSWT MISG++QN     A+  F  MT+ G +P+GF  + IL +  +++  
Sbjct: 280 DCM-EYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAI 338

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HAH+IK + E    V  AL++ Y K   L EA  VF+ + E D ++++AM+ GY
Sbjct: 339 WQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGY 398

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           ++  D   AV I++++    ++P+  TF S++   ++   A+E  KQ H   IK+  +  
Sbjct: 399 SKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGV-SSSQLAIELSKQIHGLIIKSGTSLD 457

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L  +SAL+ +YSK   +  A  VF     +D+V WNSMI G+AQ+   ++A+++F ++  
Sbjct: 458 LYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLL 517

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV-----NEHHIYPTMEHYSCMVDLYSR 629
             +  +  TF+ ++T  +    +  GQQ+   ++     N+ H+       + ++D+Y++
Sbjct: 518 SGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHV------SNALIDMYAK 571

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERA 689
            G +++      RM F ++                   D   +  +   YA  GH +E  
Sbjct: 572 CGFIKEG-----RMLFESTCG----------------EDVICWNSMITTYAQHGHAEEAL 610

Query: 690 RVRKLMNDRKVK 701
           +V +LM + +V+
Sbjct: 611 QVFRLMGEAEVE 622



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 190/384 (49%), Gaps = 37/384 (9%)

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           RL   +H++    G   D  +   L+  YS  G++ DA  +F  M   +++VSW ++IS 
Sbjct: 35  RLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPH-RNLVSWGSVISM 93

Query: 357 HLQNGAIDLAVNFFCQMTREGVR-PNGFTYSIIL---TAQPAVS-PFQVHAHIIKTNYEK 411
           + Q+G  D A++ F    +     PN F  + +L   T   AVS   QVH   +K + + 
Sbjct: 94  YTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDA 153

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           +  VGTAL+N Y K G +DEA  VF  +  +  V W+ ++ GYAQIG    A++++ ++ 
Sbjct: 154 NVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMG 213

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
            EGV+P+ F  +S ++AC+A    +E G+Q H  + ++       V + L+ +Y K   +
Sbjct: 214 IEGVRPDRFVLASAVSACSA-LGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRL 272

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
            +A ++F     R+LVSW +MI GY Q+    +A+ +F  M +   + DG     ++ +C
Sbjct: 273 SAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSC 332

Query: 592 THAGLVDEGQQYF------DIMVNEH------HIYPTMEH------------------YS 621
                + +G+Q        D+  +E+       +Y   EH                  Y+
Sbjct: 333 GSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYN 392

Query: 622 CMVDLYSRAGMLEKAMDIINRMPF 645
            M++ YS+   L +A++I  RM F
Sbjct: 393 AMIEGYSKNRDLAEAVNIFQRMRF 416


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/576 (40%), Positives = 359/576 (62%), Gaps = 21/576 (3%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           S + S+++ C   K +   +QLH+++ + GI F+  + T L+  Y  C  + +A  +F  
Sbjct: 2   SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ- 399
           + + +++  W  MI G+  NG  +LA++ + QM   G+ P+ FT+  +L A  A+S  + 
Sbjct: 62  ISK-RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEE 120

Query: 400 ---VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
              +H  +I++  E    VG AL++ Y K G ++ A +VF+ IDE+D+V W++MLA Y+Q
Sbjct: 121 GKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQ 180

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G  + ++ + R +   G+KP E TF   I A +A +  + QGK+ H  S +    +   
Sbjct: 181 NGQPDESLALCRVMAFNGLKPTEGTFVISI-AASADNGLLPQGKELHGYSWRHGFESNDK 239

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V +AL+ MY+K G++  A  +F+   ++ +VSWN+MI GYA HGH  +AL++FKEM+ + 
Sbjct: 240 VKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKV 299

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           L  D ITF+GV+ AC+H GL++EG+ +F  M+++ +I+PT++HY+CM+DL    G LE+A
Sbjct: 300 LP-DHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEA 358

Query: 637 MDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
             +I  M     A VW  +L +C+              L+ L+P D   YV+LSNMYA  
Sbjct: 359 YKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQA 418

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G W   AR+R LM ++ +KK    SWIEV NK ++FL+ D SHP+S  IY++L+     +
Sbjct: 419 GKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLM 478

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           K+AGY P    V  D++D+ K  ++S HSERLAIAFGL++T AG  L I+KNLR+C DCH
Sbjct: 479 KEAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCH 538

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             IK ISK+  R+I +RD NR+HHFK+G+CSCGD+W
Sbjct: 539 VAIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 198/389 (50%), Gaps = 8/389 (2%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           S  +S+L++C        G+Q+H    + G + +  ++T LV+LY   N++ +   +FD 
Sbjct: 2   SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           +++ N+  W  ++ GYA N   +  + L+++M+  G+ P+ FTF  VL   +    +   
Sbjct: 62  ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            ++H  VI++G E    V  ALI MY K   V  AR VFD +++RD + WNSM+A Y  N
Sbjct: 122 KKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQN 181

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               E+      M   G + T  TFV  I   A    L   ++LH    ++G + +  ++
Sbjct: 182 GQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVK 241

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T LM  Y+K G +  A  +F ++ E K VVSW AMI+G+  +G  + A++ F +M +  V
Sbjct: 242 TALMDMYAKSGSVNVARSLFELLEE-KRVVSWNAMITGYAMHGHANEALDLFKEM-KGKV 299

Query: 379 RPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAA 433
            P+  T+  +L A      ++  ++H   + +++    +V   T +++     G L+EA 
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359

Query: 434 K-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
           K + E+  E D   W A+L      G+ E
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVE 388



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 174/340 (51%), Gaps = 11/340 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFDR  +RN   +N ++  Y  +  ++ A++L+  +R  GL     T   VLK C  L  
Sbjct: 58  LFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSA 117

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+++H + ++SG   DV V  +L+D+Y +   VE  R+VFD ++E +VV W S+L+ 
Sbjct: 118 MEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLAT 177

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y++N   D  L L   M   G+KP   TF   +   AD G++    ++H    ++G E  
Sbjct: 178 YSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESN 237

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL+ MY KS  V  AR++F+ +E++  ++WN+M+ GY  +    EA + F  M  
Sbjct: 238 DKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-- 295

Query: 274 AGAELT-RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKCGK 330
            G  L    TFV V+  C+    L   + +H + + +  +    ++  T ++     CG+
Sbjct: 296 KGKVLPDHITFVGVLAACSHGGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGR 354

Query: 331 MEDASKIFSMMREMKDVVSWTAM-----ISGHLQNGAIDL 365
           +E+A K+   MR   D   W A+     I G+++ G + L
Sbjct: 355 LEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELAL 394


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/676 (37%), Positives = 399/676 (59%), Gaps = 56/676 (8%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-----G 272
           NAL+S    ++++ D   +F  M  RD++++N+++AG+        A   +  +      
Sbjct: 80  NALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAV 139

Query: 273 LAGAEL--TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           + GA +  +R T   ++   +   +  L RQ+H Q+++ G        + L+  Y+K G 
Sbjct: 140 VDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGL 199

Query: 331 MEDASKIFS---------------------MMREMK---------DVVSWTAMISGHLQN 360
           + DA ++F                      M+ E +         D ++WT M++G  QN
Sbjct: 200 IGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQN 259

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG 416
           G    A++ F +M  EGV  + +T+  ILTA  A++      Q+HA+ I+T Y+ +  VG
Sbjct: 260 GLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVG 319

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           +AL++ Y K   +  A  VF  +  K+I++W+AM+ GY Q G  E AV+++ ++ ++G+K
Sbjct: 320 SALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIK 379

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PN+FT  SVI++C A  A++E+G QFH  ++ + L   + VSSALVT+Y K G+IE A  
Sbjct: 380 PNDFTLGSVISSC-ANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHR 438

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F      D VS+ +++ GYAQ G  K+ +++F++M  + ++ +G+TFIGV++AC+ +GL
Sbjct: 439 LFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGL 498

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V++G  YF  M  +H I    +HY+CM+DLYSR+G L++A + I +MP    A  W T+L
Sbjct: 499 VEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLL 558

Query: 657 AACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
           +ACRL              +   P + A YVLL +M+A+ G W E A +R+ M DR+VKK
Sbjct: 559 SACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKK 618

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
           E G SWI+ KN+ + F A D SHP S  IY KL+ L++++ + GYKPD S VL D+ D  
Sbjct: 619 EPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAE 678

Query: 763 KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
           K  +LS HSE+LAIAFGL+  P   P+++VKNLRVC DCH   K ISK+  RDI+VRD  
Sbjct: 679 KVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAV 738

Query: 823 RFHHFKEGLCSCGDYW 838
           RFH F  G+CSCGD+W
Sbjct: 739 RFHKFSNGICSCGDFW 754



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 215/478 (44%), Gaps = 57/478 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-------TLSSVLK 86
           LF   PQR+ V YN L+  +        A   +  + R    + G+       T+S ++ 
Sbjct: 98  LFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVM 157

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV- 145
               L D   GRQVHC+ ++ GF       + LVD+Y +   + D +RVFD+M   NVV 
Sbjct: 158 AASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVM 217

Query: 146 ------------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
                                         +WT++++G  +N +    L++F RM+ EG+
Sbjct: 218 YNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGV 277

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
             + +TF ++L             Q+H   I+   +    V +AL+ MY K + +R A A
Sbjct: 278 GIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEA 337

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           VF  M  ++ I+W +M+ GY  N    EA   F+ M   G +    T  SVI  CA    
Sbjct: 338 VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLAS 397

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           L    Q H   L +G+     + + L+  Y KCG +EDA ++F  M    D VS+TA++S
Sbjct: 398 LEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEM-PFHDQVSYTALVS 456

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPF----QVHAHI 404
           G+ Q G     ++ F +M  +GV+PNG T+  +L+A       +   S F    Q H  +
Sbjct: 457 GYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIV 516

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTE 461
           +  ++       T +++ Y + G L EA +    +    D + W+ +L+     GD E
Sbjct: 517 LLDDHY------TCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDME 568



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 169/336 (50%), Gaps = 1/336 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+    R+ + +  ++    ++ L  EAL++F  +R  G+ +   T  S+L  CG L
Sbjct: 235 RGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGAL 294

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +++ +  ++ V ++LVD+Y +  ++     VF  M   N++SWT+++
Sbjct: 295 AASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMI 354

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY +N   +  + +F  MQ +GIKPN FT  +V+   A+   +    Q H M + +G  
Sbjct: 355 VGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLR 414

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V +AL+++Y K   + DA  +FD M   D +++ ++V+GY       E  + F  M
Sbjct: 415 PYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKM 474

Query: 272 GLAGAELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
            L G +    TF+ V+  C+ +  + +     HS    +GI    +  T ++  YS+ G+
Sbjct: 475 LLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGR 534

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +++A +    M    D + W  ++S     G +++ 
Sbjct: 535 LKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIG 570



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 135/331 (40%), Gaps = 72/331 (21%)

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG-----------------T 417
           R+G R  G  + ++L   P   P  V  H++ T Y +S  +                   
Sbjct: 22  RDGARVPGAVHCLVLRTLPHPPPTYVLNHLL-TAYARSGRLPLARRLFDAMPDPNLFTRN 80

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG--- 474
           ALL+A     +L +  ++F  + ++D V+++A++AG++  G    A   YR L  E    
Sbjct: 81  ALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVV 140

Query: 475 ----VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
               V+P+  T S ++ A +A       G+Q H   ++          S LV MY+K G 
Sbjct: 141 DGARVRPSRITMSGMVMAASALGDRA-LGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGL 199

Query: 531 I-------------------------------ESASEVFKRQRKRDLVSWNSMICGYAQH 559
           I                               E A  VF+    RD ++W +M+ G  Q+
Sbjct: 200 IGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQN 259

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G   +AL+VF+ MR + +  D  TF  ++TAC      +EG+Q         H Y     
Sbjct: 260 GLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQI--------HAYTIRTL 311

Query: 620 Y-------SCMVDLYSRAGMLEKAMDIINRM 643
           Y       S +VD+YS+   +  A  +  RM
Sbjct: 312 YDGNIFVGSALVDMYSKCRSIRLAEAVFRRM 342


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/802 (33%), Positives = 429/802 (53%), Gaps = 95/802 (11%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKP 177
           +++ Y++   + D   +F  M   +V SW +L+SGY +++     LE F  M   G   P
Sbjct: 77  MLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSP 136

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM-------------- 223
           N+FTF+  +      G  + A+Q+  MV K G +  + V  AL+ M              
Sbjct: 137 NAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLF 196

Query: 224 -----------------YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
                            Y+K+  V  A  +FD M +RD ++WN MV+    +    EA +
Sbjct: 197 VRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
              +M   G  L  +T+ S +  CA    LR  +QLH+QV++N    D  + + L+  Y+
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYA 316

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG  ++A  +F+ + + ++ V+WT +I+G LQ+G    +V  F QM  E +  + F  +
Sbjct: 317 KCGCFKEAKGVFNSLHD-RNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALA 375

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +++   +        Q+H+  +K+   ++  V  +L++ Y K   L  A  +F  ++EK
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEK 435

Query: 443 DIVAWSAMLAGYAQIGDT-------------------------------EGAVKIYRQLT 471
           DIV+W++M+  ++Q+G+                                E  +++Y  + 
Sbjct: 436 DIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVML 495

Query: 472 SE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
           SE  V+P+  T+ ++   C A   A + G Q    ++K  L     V++A++TMYSK G 
Sbjct: 496 SEKDVRPDWVTYVTLFKGC-ADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGR 554

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           I  A +VF     +D+VSWN+MI GY+QHG  K+A+E+F ++ ++  + D I+++ V++ 
Sbjct: 555 ILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 614

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C+H+GLV EG+ YFD+M   H+I P +EH+SCMVDL  RAG L +A D+I+ MP   +A 
Sbjct: 615 CSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAE 674

Query: 651 VWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           VW  +L+AC++                L   DS  Y+L++ +YA  G   + A++RKLM 
Sbjct: 675 VWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMR 734

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           D+ +KK  GYSW+EV NK + F A D+SHPQ   I  KL+EL  ++   GY         
Sbjct: 735 DKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYVR------- 787

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
              D  +  I   HSE+LA+AFGL++ PA  P+ I+KNLR+CGDCHTVIKLIS +  R+ 
Sbjct: 788 --TDSPRSEI--HHSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREF 843

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           V+RD  RFHHF  G CSCGDYW
Sbjct: 844 VIRDAVRFHHFNGGSCSCGDYW 865



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/602 (25%), Positives = 276/602 (45%), Gaps = 72/602 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGCLF 92
           LF R P R+   +N L+  Y +   +  +L  F+ + R G     + T +  +K+CG L 
Sbjct: 93  LFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALG 152

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR------------------ 134
           +     Q+     K G   D +V+ +LVD+++R   V+   R                  
Sbjct: 153 ERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLV 212

Query: 135 -------------VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                        +FD M E +VVSW  ++S  +++      L++   MQ +G++ +S T
Sbjct: 213 GYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTT 272

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +++ L   A    +    Q+H  VI+N   +   V +AL+ +Y K    ++A+ VF+ + 
Sbjct: 273 YTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLH 332

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           DR+++ W  ++AG++ +    E+ E FN M      L +    ++I  C +  +L L RQ
Sbjct: 333 DRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQ 392

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LHS  LK+G      +   L+  Y+KC  ++ A  IF  M E KD+VSWT+MI+ H Q G
Sbjct: 393 LHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNE-KDIVSWTSMITAHSQVG 451

Query: 362 AIDLAVNFF--------------------------------CQMTREGVRPNGFTYSIIL 389
            I  A  FF                                  ++ + VRP+  TY  + 
Sbjct: 452 NIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLF 511

Query: 390 TAQPAVSPFQVHAHII----KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
                +   ++   II    K       SV  A++  Y K G + EA KVF+ ++ KDIV
Sbjct: 512 KGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIV 571

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AM+ GY+Q G  + A++I+  +   G KP+  ++ +V++ C+  S  V++GK +   
Sbjct: 572 SWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS-HSGLVQEGKSYFDM 630

Query: 506 SIKA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTK 563
             +   ++  L   S +V +  + G++  A ++      +     W +++     HG+ +
Sbjct: 631 MKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNE 690

Query: 564 KA 565
            A
Sbjct: 691 LA 692



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 271/573 (47%), Gaps = 74/573 (12%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N +++ Y+K   + DA  +F  M  RD  +WN++++GY  ++ ++ + E+F +M  +G  
Sbjct: 75  NVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDS 134

Query: 278 LTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
              + TF   +K C    E  LA QL   V K G   D ++   L+  + +CG ++ AS+
Sbjct: 135 SPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASR 194

Query: 337 IFSMMRE------------------------------MKDVVSWTAMISGHLQNGAIDLA 366
           +F  ++E                               +DVVSW  M+S   Q+G +  A
Sbjct: 195 LFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 254

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
           ++    M  +GVR +  TY+  LTA   +S      Q+HA +I+        V +AL+  
Sbjct: 255 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVEL 314

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G   EA  VF  + +++ VAW+ ++AG+ Q G    +V+++ Q+ +E +  ++F  
Sbjct: 315 YAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFAL 374

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
           +++I+ C +    +  G+Q H+  +K+    A+ VS++L++MY+K  N++SA  +F+   
Sbjct: 375 ATLISGCCS-RMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMN 433

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           ++D+VSW SMI  ++Q G+  KA E F  M  +++    IT+  ++ A    G  ++G +
Sbjct: 434 EKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNV----ITWNAMLGAYIQHGAEEDGLR 489

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLI 662
            +++M++E  + P    Y  +    +  G  +    II            RTV     L 
Sbjct: 490 MYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIG-----------RTVKVGLIL- 537

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
                D+++   +  MY+  G   E  +V   +N + +      SW        + + G 
Sbjct: 538 -----DTSVANAVITMYSKCGRILEARKVFDFLNVKDI-----VSW-------NAMITGY 580

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPD-TSYV 754
             H    Q     +++  R    G KPD  SYV
Sbjct: 581 SQHGMGKQAIEIFDDILKR----GAKPDYISYV 609



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 176/382 (46%), Gaps = 55/382 (14%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F+    RN V +  L+  + +     E++ LF  +R   + L    L++++  C
Sbjct: 322 KEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   GRQ+H  C+KSG  + V VS SL+ +Y + +N++    +F  MNE ++VSWT
Sbjct: 382 CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWT 441

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEG--------------------------------IK 176
           S+++ +++     +  E F  M  +                                 ++
Sbjct: 442 SMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVR 501

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+ T+    AD G      Q+    +K G  + TSV NA+I+MY K   + +AR V
Sbjct: 502 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKV 561

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  +D ++WN+M+ GY  + +  +A E F+++   GA+    ++V+V+  C+     
Sbjct: 562 FDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS----- 616

Query: 297 RLARQLHSQVLKNGID-FD-----HNIRTGL-----MV-AYSKCGKMEDASKIFSMMREM 344
                 HS +++ G   FD     HNI  GL     MV    + G + +A  +   M   
Sbjct: 617 ------HSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMK 670

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
                W A++S    +G  +LA
Sbjct: 671 PTAEVWGALLSACKIHGNNELA 692



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 189/434 (43%), Gaps = 79/434 (18%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG------------ 329
            F   ++ C     L  AR LH +++  G+     ++  L+ AY  CG            
Sbjct: 6   AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65

Query: 330 --------------------KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
                               ++ DA ++F  M   +DV SW  ++SG+ Q+     ++  
Sbjct: 66  IAHPNVITHNVMLNGYVKLGRLSDAVELFGRM-PARDVASWNTLMSGYFQSQQYLASLES 124

Query: 370 FCQMTREG-VRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYV 424
           F  M R G   PN FT++  + +  A+       Q+   + K   +    V  AL++ +V
Sbjct: 125 FVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFV 184

Query: 425 KKGILDEAAKVF----------------------------ELID---EKDIVAWSAMLAG 453
           + G +D A+++F                            EL D   E+D+V+W+ M++ 
Sbjct: 185 RCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
            +Q G    A+ +   + S+GV+ +  T++S + AC A  +++  GKQ HA  I+    N
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC-ARLSSLRWGKQLHAQVIR----N 299

Query: 514 ALC----VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             C    V+SALV +Y+K G  + A  VF     R+ V+W  +I G+ QHG   +++E+F
Sbjct: 300 LPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELF 359

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +MR + +  D      +I+ C     +  G+Q   + +    I   +   S ++ +Y++
Sbjct: 360 NQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAK 418

Query: 630 AGMLEKAMDIINRM 643
              L+ A  I   M
Sbjct: 419 CDNLQSAESIFRFM 432


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/673 (37%), Positives = 382/673 (56%), Gaps = 55/673 (8%)

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +++  +++ +   DAR VFD    R +  W   ++G      + +    F  M LA  E 
Sbjct: 50  SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEM-LAEGEA 108

Query: 279 TRSTFV--SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           T + FV  +V++ CA   ++   +++H  +L+NG+  D  +   ++  Y+KCG+ E A +
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168

Query: 337 IFSMMRE------------------------------MKDVVSWTAMISGHLQNGAIDLA 366
           +F  M E                              ++D  SW  +ISG +++G    A
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADA 228

Query: 367 VNFFCQMTREGVRPNGFTYS--IILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNA 422
           ++   +M + GV  N +TYS   +L     +     Q+H  ++    E    V ++L++ 
Sbjct: 229 LSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDM 288

Query: 423 YVKKGILDEAAKVFELIDE--KDI-VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           Y K G+L+ AA VF+      +D+  AWS M+AGY Q G  E A+ ++R++  EGV  + 
Sbjct: 289 YCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADR 348

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           FT +SV  AC A    VEQG+Q H C  K        ++SA+V MY+K GN+E A  +F 
Sbjct: 349 FTLTSVAAAC-ANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFD 407

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
           R   +++  W SM+C YA HG  + A+E+F+ M  + +  + IT +GV++AC+H GLV E
Sbjct: 408 RACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSE 467

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G+ YF  M  E+ I P++EHY+C+VDLY R+G+L+KA + I        A VW+T+L+AC
Sbjct: 468 GELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSAC 527

Query: 660 RL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           RL              + L+  D+  YV+LSN+YA    W +   +R  M +RKV+K+ G
Sbjct: 528 RLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPG 587

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            SWI +KN  ++F+AGD SHPQS +IY+ LE+L  RLK+ GY   T  V+ D++DE +E 
Sbjct: 588 RSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRET 647

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
            L  HSE+LAIAFG+++TP+G PL+I KNLRVC DCH  IK IS    R+IVVRD  RFH
Sbjct: 648 ALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFH 707

Query: 826 HFKEGLCSCGDYW 838
           HFK+  CSC D+W
Sbjct: 708 HFKDASCSCEDFW 720



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 224/490 (45%), Gaps = 43/490 (8%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-I 175
            S++  ++R     D R VFD+        WT  +SG AR       +  F  M  EG  
Sbjct: 49  ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
            PN+F  + V+   A  G V +  +VH  +++NG  +   +CNA++ MY K      AR 
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168

Query: 236 VFDGMEDRDSITWN-------------------------------SMVAGYVTNELHMEA 264
           VF  M +RD+++WN                               ++++G + +    +A
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADA 228

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
                 M  AG      T+ +   L        L RQLH +VL   ++ D  +R+ LM  
Sbjct: 229 LSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDM 288

Query: 325 YSKCGKMEDASKIFS----MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           Y KCG +E A+ +F     + R+M    +W+ M++G++QNG  + A++ F +M REGV  
Sbjct: 289 YCKCGLLEAAASVFDHWSPLTRDMN--FAWSTMVAGYVQNGREEEALDLFRRMLREGVAA 346

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + FT + +  A   V       QVH  + K  Y+    + +A+++ Y K G L++A  +F
Sbjct: 347 DRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIF 406

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           +    K+I  W++ML  YA  G    A++++ ++T+E + PNE T   V++AC+      
Sbjct: 407 DRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVS 466

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICG 555
           E    F     +  +  ++   + +V +Y + G ++ A    +      + + W +++  
Sbjct: 467 EGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSA 526

Query: 556 YAQHGHTKKA 565
              H H + A
Sbjct: 527 CRLHQHNEYA 536



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 202/466 (43%), Gaps = 48/466 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           + +FD  P R    +   +    R   + + +  F  +   G     +  L++V++ C  
Sbjct: 65  RGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAG 124

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV----- 145
           + D   G++VH   +++G   DV +  +++D+Y +    E  RRVF  M E + V     
Sbjct: 125 MGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIA 184

Query: 146 --------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
                                     SW +++SG  R+      L    RM   G+  N 
Sbjct: 185 IGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNH 244

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           +T+ST   +     +     Q+H  V+    E    V ++L+ MY K  ++  A +VFD 
Sbjct: 245 YTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDH 304

Query: 240 MED--RD-SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
                RD +  W++MVAGYV N    EA + F  M   G    R T  SV   CA    +
Sbjct: 305 WSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMV 364

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
              RQ+H  V K     D  + + ++  Y+KCG +EDA  IF      K++  WT+M+  
Sbjct: 365 EQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRA-CTKNIAVWTSMLCS 423

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP---AVSPFQVHAHIIKTNYEKSF 413
           +  +G   +A+  F +MT E + PN  T   +L+A      VS  +++   ++  Y    
Sbjct: 424 YASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVP 483

Query: 414 SVG--TALLNAYVKKGILDEAAKVFELIDEKDI----VAWSAMLAG 453
           S+     +++ Y + G+LD+A      I+E +I    + W  +L+ 
Sbjct: 484 SIEHYNCIVDLYGRSGLLDKAKN---FIEENNINHEAIVWKTLLSA 526


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/664 (35%), Positives = 389/664 (58%), Gaps = 27/664 (4%)

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
           + A Q+H   I+      TS  + +IS+Y   K++ +A  VF  +E    + W S++  +
Sbjct: 22  SQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCF 80

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
               L   A  +F  M  +G     + F SV+K C    +LR    +H  +++ G+D D 
Sbjct: 81  TDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
                LM  YSK   ++   K+F +M   KDVVS+  +I+G+ Q+G  + A+    +M  
Sbjct: 141 YTGNALMNMYSKLLGIDSVRKVFELMPR-KDVVSYNTVIAGYAQSGMYEDALRMVREMGT 199

Query: 376 EGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
             ++P+ FT S +L   P  S +       ++H ++I+   +    +G++L++ Y K   
Sbjct: 200 SDLKPDAFTLSSVL---PIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 256

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           ++++ +VF  +  +D ++W++++AGY Q G    A++++RQ+ S  V+P    FSSVI A
Sbjct: 257 IEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPA 316

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C A  A +  GKQ H   ++      + ++SALV MYSK GNI++A ++F R    D VS
Sbjct: 317 C-AHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVS 375

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           W ++I G+A HGH  +A+ +F+EM+RQ ++ + + F+ V+TAC+H GLVDE   YF+ M 
Sbjct: 376 WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMT 435

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------- 659
             + +   +EHY+ + DL  RAG LE+A D I++M    + +VW T+L++C         
Sbjct: 436 KVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELA 495

Query: 660 -----RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNK 714
                ++ ++   +   YVL+ NMYA+ G W+E A++R  +  + ++K+   SWIE+KNK
Sbjct: 496 EKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNK 555

Query: 715 TYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERL 774
           T+ F++GD SHP  ++I   L+ +  +++  GY  DTS VL D+D+EHK  +L  HSERL
Sbjct: 556 THGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERL 615

Query: 775 AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           A+AFG++ T  G  +++ KN+R+C DCH  IK ISK+  R+I+VRD +RFHHF  G CSC
Sbjct: 616 AVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSC 675

Query: 835 GDYW 838
           GDYW
Sbjct: 676 GDYW 679



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/438 (31%), Positives = 220/438 (50%), Gaps = 30/438 (6%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           +   SL   AL  F+ +R  G     +   SVLK+C  + D  FG  VH   V+ G   D
Sbjct: 80  FTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           +    +L+++Y +   ++  R+VF+ M   +VVS+ ++++GYA++ M +  L +   M  
Sbjct: 140 LYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGT 199

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
             +KP++FT S+VL + ++   V    ++H  VI+ G +    + ++L+ MY KS  + D
Sbjct: 200 SDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED 259

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           +  VF  +  RDSI+WNS+VAGYV N  + EA   F  M  A        F SVI  CA 
Sbjct: 260 SERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAH 319

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              L L +QLH  VL+ G   +  I + L+  YSKCG ++ A KIF  M  + D VSWTA
Sbjct: 320 LATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRM-NLHDEVSWTA 378

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           +I GH  +G    AV+ F +M R+GV+PN   +  +LTA         H  ++   +   
Sbjct: 379 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS-------HVGLVDEAW--- 428

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                         G  +   KV+ L  E +  A  A L G A  G  E A   Y  ++ 
Sbjct: 429 --------------GYFNSMTKVYGLNQELEHYAAVADLLGRA--GKLEEA---YDFISK 469

Query: 473 EGVKPNEFTFSSVINACT 490
             V+P    +S+++++C+
Sbjct: 470 MRVEPTGSVWSTLLSSCS 487



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 168/339 (49%), Gaps = 7/339 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG---LPLFGSTLSSVLKTC 88
           + +F+  P+++ V YN ++  Y +  ++++AL +   +R +G   L     TLSSVL   
Sbjct: 160 RKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRM---VREMGTSDLKPDAFTLSSVLPIF 216

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D + G+++H   ++ G   DV + +SLVD+Y ++  +ED  RVF  +   + +SW 
Sbjct: 217 SEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWN 276

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           SL++GY +N   +  L LF +M    ++P +  FS+V+   A    +    Q+H  V++ 
Sbjct: 277 SLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 336

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G      + +AL+ MY K   ++ AR +FD M   D ++W +++ G+  +    EA   F
Sbjct: 337 GFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLF 396

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSK 327
             M   G +  +  FV+V+  C+    +  A    + + K  G++ +      +     +
Sbjct: 397 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 456

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            GK+E+A    S MR       W+ ++S    +  ++LA
Sbjct: 457 AGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELA 495


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 274/804 (34%), Positives = 432/804 (53%), Gaps = 99/804 (12%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK-P 177
           +++ Y +  ++ D   +F  M   +V SW +L+SGY ++      +E F  M+  G   P
Sbjct: 101 MMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLP 160

Query: 178 NSFTFST----------------VLGVLADEGIVA---TAVQVHTMVIKNGG-------- 210
           N+FTF                  +LG+L   G       A  +  M ++ G         
Sbjct: 161 NAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQF 220

Query: 211 ---EVVTSVC-NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
              E  T  C N++++ Y KS  V  A  +F+ M +RD ++WN MV+    +    EA  
Sbjct: 221 SQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALS 280

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
              +M   G  L  +T+ S +  CA    L   +QLH+QV+++    D  + + ++  Y+
Sbjct: 281 VAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYA 340

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG  ++A ++FS +R+ ++ VSWT +I G LQ G    ++  F QM  E +  + F  +
Sbjct: 341 KCGCFKEARRVFSSLRD-RNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALA 399

Query: 387 IILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            I++            Q+H+  +K+ + ++  +  +L++ Y K G L  A  +F  ++E+
Sbjct: 400 TIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEER 459

Query: 443 DIVAWSAMLAGYAQIGDT-------------------------------EGAVKIYR-QL 470
           DIV+W+ ML  Y+Q+G+                                E  +K+Y   L
Sbjct: 460 DIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAML 519

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
           T + V P+  T+ ++   C A   A + G Q    ++K  L     V +A++TMYSK G 
Sbjct: 520 TEKDVIPDWVTYVTLFRGC-ADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGR 578

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           I  A ++F    ++DLVSWN+MI GY+QHG  K+A+E+F +M ++  + D I+++ V+++
Sbjct: 579 ISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSS 638

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C+H+GLV EG+ YFD++  +H++ P +EH+SCMVDL +RAG L +A ++I+ MP   +A 
Sbjct: 639 CSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAE 698

Query: 651 VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           VW  +L+AC+              L  L   DS  Y+LL+ +YA  G   + A+VRKLM 
Sbjct: 699 VWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMR 758

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           D+ +KK  GYSW+EVKNK + F A D+SHPQ   I  KL+EL  ++   GY         
Sbjct: 759 DKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYV-------- 810

Query: 757 DIDDEHKEAILSQ--HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
                  E++ S+  HSE+LA+AFG++  PA  P+ I+KNLR+CGDCHTVIKLIS +  R
Sbjct: 811 -----RTESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGR 865

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           + V+RD  RFHHFK G CSCGDYW
Sbjct: 866 EFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/604 (26%), Positives = 283/604 (46%), Gaps = 72/604 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           + LF R P+R+   +N L+  Y +     +A+  F+ +RR G  L  + T    +K+CG 
Sbjct: 115 EELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGA 174

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L  H    Q+     K GF  D +V+T +VD+++R   V+   + F  +    V    S+
Sbjct: 175 LGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSM 234

Query: 151 LSGYARNKMNDRVLELFHR-------------------------------MQVEGIKPNS 179
           L+GYA++   D  LELF                                 M   G++ +S
Sbjct: 235 LAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDS 294

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            T+++ L   A    +    Q+H  VI++   +   V +A++ +Y K    ++AR VF  
Sbjct: 295 TTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSS 354

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           + DR++++W  ++ G++      E+ E FN M      + +    ++I  C+   ++ LA
Sbjct: 355 LRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLA 414

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           RQLHS  LK+G      I   L+  Y+KCG +++A  IFS M E +D+VSWT M++ + Q
Sbjct: 415 RQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEE-RDIVSWTGMLTAYSQ 473

Query: 360 NGAIDLAVNFFCQMT---------------REGVRPNGF-TYSIILTAQPAVSPF----- 398
            G I  A  FF  M+               + G   +G   YS +LT +  +  +     
Sbjct: 474 VGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVT 533

Query: 399 ---------------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
                          Q+  H +K       SV  A++  Y K G + EA K+F+ +  KD
Sbjct: 534 LFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKD 593

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK-QF 502
           +V+W+AM+ GY+Q G  + A++I+  +  +G KP+  ++ +V+++C+  S  V++GK  F
Sbjct: 594 LVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCS-HSGLVQEGKFYF 652

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGN-IESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
                   ++  L   S +V + ++ GN IE+ + + +   K     W +++     HG+
Sbjct: 653 DMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGN 712

Query: 562 TKKA 565
            + A
Sbjct: 713 NELA 716



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 174/382 (45%), Gaps = 55/382 (14%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F     RN V +  L+  + +     E+L LF  +R   + +    L++++  C
Sbjct: 346 KEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGC 405

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D    RQ+H   +KSG  R V +S SL+ +Y +  N+++   +F  M E ++VSWT
Sbjct: 406 SNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWT 465

Query: 149 SLLSGYARNKMNDRVLELF--------------------HRMQVEGIK------------ 176
            +L+ Y++     +  E F                    H  + +G+K            
Sbjct: 466 GMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVI 525

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+ T+    AD G      Q+    +K G  + TSV NA+I+MY K   + +AR +
Sbjct: 526 PDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKI 585

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  +D ++WN+M+ GY  + +  +A E F++M   GA+    ++V+V+  C+     
Sbjct: 586 FDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCS----- 640

Query: 297 RLARQLHSQVLKNG------IDFDHNIRTGL-----MV-AYSKCGKMEDASKIFSMMREM 344
                 HS +++ G      +  DHN+  GL     MV   ++ G + +A  +   M   
Sbjct: 641 ------HSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMK 694

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
                W A++S    +G  +LA
Sbjct: 695 PTAEVWGALLSACKTHGNNELA 716



 Score = 43.5 bits (101), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 25/191 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +++ V +N ++  Y +  + ++A+ +F  + + G      +  +VL +C   
Sbjct: 583 RKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCS-- 640

Query: 92  FDHVFGRQVHCECVKSG------FARDVNVSTSL------VDLYMRTNNVEDGRRVFDDM 139
                    H   V+ G        RD NVS  L      VDL  R  N+ + + + D+M
Sbjct: 641 ---------HSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEM 691

Query: 140 N-ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
             +     W +LLS   +   N+ + EL  +   +   P+S  +  +  + AD G    +
Sbjct: 692 PMKPTAEVWGALLSA-CKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDS 750

Query: 199 VQVHTMVIKNG 209
            QV  ++   G
Sbjct: 751 AQVRKLMRDKG 761


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 276/770 (35%), Positives = 402/770 (52%), Gaps = 129/770 (16%)

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED------------- 242
           + A  VH  +I +G +    + N LI +Y KS  +  A  +FD +               
Sbjct: 32  SIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAH 91

Query: 243 --------------------RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
                               RD++ +N+M+ GY  N     A E F ++   G      T
Sbjct: 92  SSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFT 151

Query: 283 FVSVI-KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK---------ME 332
           F SV+  L    ++ +  +Q+H  V+K+G  F  ++   L+  + KC           M 
Sbjct: 152 FTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMA 211

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE---------------- 376
            A K+F  M E +D +SWT MI+G+++NG +D A  F   MT +                
Sbjct: 212 AARKLFDEMTE-RDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHG 270

Query: 377 ---------------GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT----NYEKSF 413
                          G++ + FTY+ +L+A      F    QVHA+I++T    + + S 
Sbjct: 271 FFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSL 330

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY------------------- 454
           SV  AL   Y K G +DEA +VF  +  KD+V+W+A+L+GY                   
Sbjct: 331 SVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPER 390

Query: 455 ------------AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
                       AQ G  E ++K++ ++ SEG +P ++ F+  I AC A  AA+  G+Q 
Sbjct: 391 NLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIAC-AWLAALMHGRQL 449

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           HA  ++   +++L   +AL+TMY+K G +E+A  +F      D VSWN+MI    QHGH 
Sbjct: 450 HAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHG 509

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            +ALE+F+ M ++D+  D ITF+ V++ C+HAGLV+EG +YF  M   + I P  +HY+ 
Sbjct: 510 AQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYAR 569

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           M+DL  RAG   +A D+I  MP      +W  +LA CR              L  L P  
Sbjct: 570 MIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQH 629

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
              YVLLSNMYA  G W + A+VRKLM D+ VKKE G SWIEV+NK + FL  DI HP+ 
Sbjct: 630 DGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEV 689

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
             +Y+ LEEL  +++  GY PDT +VL D++ E KE +LS HSE+LA+ FGL+  P GA 
Sbjct: 690 QAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGAT 749

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +++ KNLR+CGDCH   K +SK+  R+IVVRD  RFHHFK G CSCG+YW
Sbjct: 750 VRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 241/521 (46%), Gaps = 121/521 (23%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL------ 151
           R VH   + SGF     +   L+D+Y +++++     +FD++ + ++V+ T+L+      
Sbjct: 35  RTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSA 94

Query: 152 ---------------------------SGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
                                      +GY+ N      +ELF  +   G +P++FTF++
Sbjct: 95  GNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTS 154

Query: 185 VLGVLA----DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK---------SKMVR 231
           VLG LA    DE       Q+H  V+K+G   VTSV NAL+S+++K         S ++ 
Sbjct: 155 VLGALALIVEDE---KQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMA 211

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNE-------------------------------L 260
            AR +FD M +RD ++W +M+AGYV N                                 
Sbjct: 212 AARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGF 271

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN----GIDFDHN 316
            +EA E F  M L G +    T+ SV+  CA        +Q+H+ +L+      +DF  +
Sbjct: 272 FLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLS 331

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR- 375
           +   L   Y KCGK+++A ++F+ M  +KD+VSW A++SG++  G ID A +FF +M   
Sbjct: 332 VNNALATLYWKCGKVDEARQVFNQM-PVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPER 390

Query: 376 ------------------------------EGVRPNGFTYSIILTAQPAVSPF----QVH 401
                                         EG  P  + ++  + A   ++      Q+H
Sbjct: 391 NLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLH 450

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           A +++  ++ S S G AL+  Y K G+++ A  +F  +   D V+W+AM+A   Q G   
Sbjct: 451 AQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGA 510

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            A++++  +  E + P+  TF +V++ C+  +  VE+G ++
Sbjct: 511 QALELFELMLKEDILPDRITFLTVLSTCSH-AGLVEEGHRY 550



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 40/374 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +   D   ++  V +N ++  Y       EAL +F  +  LG+     T +SVL  C   
Sbjct: 245 RQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANA 304

Query: 92  FDHVFGRQVHCECVKS----GFARDVNVSTSLVDLYMRTNNVEDGRRVF----------- 136
              + G+QVH   +++         ++V+ +L  LY +   V++ R+VF           
Sbjct: 305 GFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSW 364

Query: 137 --------------------DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
                               ++M E N+++WT ++SG A+N   +  L+LF+RM+ EG +
Sbjct: 365 NAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFE 424

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P  + F+  +   A    +    Q+H  +++ G +   S  NALI+MY K  +V  A  +
Sbjct: 425 PCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCL 484

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           F  M   DS++WN+M+A    +    +A E F  M        R TF++V+  C+    +
Sbjct: 485 FLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLV 544

Query: 297 RLA-RQLHSQVLKNGI--DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
               R   S     GI    DH  R  ++    + GK  +A  +   M        W A+
Sbjct: 545 EEGHRYFKSMSGLYGICPGEDHYAR--MIDLLCRAGKFSEAKDMIETMPVEPGPPIWEAL 602

Query: 354 ISGHLQNGAIDLAV 367
           ++G   +G +DL +
Sbjct: 603 LAGCRIHGNMDLGI 616



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 149/355 (41%), Gaps = 88/355 (24%)

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           N  +YSI  T         VHAH+I + ++    +   L++ Y K   L  A  +F+ I 
Sbjct: 27  NPMSYSIART---------VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIR 77

Query: 441 EKDIVA---------------------------------WSAMLAGYAQIGDTEGAVKIY 467
           + DIVA                                 ++AM+ GY+   D  GA++++
Sbjct: 78  QPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELF 137

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM--- 524
           R L   G +P+ FTF+SV+ A        +Q +Q H   +K+       V +AL+++   
Sbjct: 138 RDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVK 197

Query: 525 -------------------------------------YSKKGNIESASEVFKRQRKRDLV 547
                                                Y + G +++A +      ++ +V
Sbjct: 198 CASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVV 257

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           +WN+MI GY  HG   +ALE+F++M    +++D  T+  V++AC +AG    G+Q    +
Sbjct: 258 AWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYI 317

Query: 608 VNEHHIYPTMEHY----SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +      P+++      + +  LY + G +++A  + N+MP       W  +L+ 
Sbjct: 318 LRTEP-RPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMP-VKDLVSWNAILSG 370


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/694 (35%), Positives = 400/694 (57%), Gaps = 57/694 (8%)

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS-ITWNSMVAG 254
           + A Q+H  +++       S+ + ++S+Y    ++ D+  +F+ +    + + W S++  
Sbjct: 22  SQAKQLHAQILRTSLPS-PSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRC 80

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           Y ++ L + +   F  M  +G     + F SV+K C   K+LR    +H  +++ G+ FD
Sbjct: 81  YTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFD 140

Query: 315 HNIRTGLMVAYSKCGKMEDAS-----------------------------KIFSMMREMK 345
                 LM  YSK   +E+ +                             K+F MM + +
Sbjct: 141 LYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPK-R 199

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF------- 398
           D+VSW  +ISG+ QNG  + A+    +M    +RP+ FT S +L   P  + +       
Sbjct: 200 DIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL---PIFAEYVNLLKGK 256

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           ++H + I+  Y+    +G++L++ Y K   +D++ +VF ++ + D ++W++++AG  Q G
Sbjct: 257 EIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNG 316

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             +  +K ++Q+    +KPN  +FSS++ AC A    +  GKQ H   I+++ +  + ++
Sbjct: 317 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPAC-AHLTTLHLGKQLHGYIIRSRFDGNVFIA 375

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           SALV MY+K GNI +A  +F +    D+VSW +MI GYA HGH   A+ +FK M  + ++
Sbjct: 376 SALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVK 435

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            + + F+ V+TAC+HAGLVDE  +YF+ M  ++ I P +EHY+ + DL  R G LE+A +
Sbjct: 436 PNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYE 495

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
            I+ M    + +VW T+LAACR              L ++ P +   YVLLSN+Y+A G 
Sbjct: 496 FISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGR 555

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W++  ++R  M D+ +KK+   SWIE+KNK ++F+AGD SHP  ++I   L+ L  +++ 
Sbjct: 556 WKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMER 615

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            GY  DT+ VL D+++E K  +L  HSERLAI FG+++TPAG  +++ KNLRVC DCHT 
Sbjct: 616 EGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTA 675

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            K ISK+  R+IVVRD +RFHHFK+G CSCGD+W
Sbjct: 676 TKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/470 (27%), Positives = 220/470 (46%), Gaps = 67/470 (14%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           Y    L   +L+ F+ +   G     +   SVLK+C  + D  FG  VH   ++ G   D
Sbjct: 81  YTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFD 140

Query: 113 VNVSTSLVDLYMRTNNVEDG-----------------------------RRVFDDMNESN 143
           +    +L+++Y +  ++E+                              R+VF+ M + +
Sbjct: 141 LYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRD 200

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +VSW +++SG A+N M++  L +   M    ++P+SFT S+VL + A+   +    ++H 
Sbjct: 201 IVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHG 260

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
             I+NG +    + ++LI MY K   V D+  VF  +   D I+WNS++AG V N +  E
Sbjct: 261 YAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDE 320

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
             + F  M +A  +    +F S++  CA    L L +QLH  ++++  D +  I + L+ 
Sbjct: 321 GLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVD 380

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y+KCG +  A  IF  M E+ D+VSWTAMI G+  +G    A++ F +M  EGV+PN  
Sbjct: 381 MYAKCGNIRTARWIFDKM-ELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYV 439

Query: 384 TYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            +  +LTA         HA                        G++DEA K F  + +  
Sbjct: 440 AFMAVLTACS-------HA------------------------GLVDEAWKYFNSMTQDY 468

Query: 444 IVAWSAMLAGYAQIGDTEGAV----KIYRQLTSEGVKPNEFTFSSVINAC 489
            +     L  YA + D  G V    + Y  ++   ++P    +S+++ AC
Sbjct: 469 RII--PGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAAC 516



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 177/353 (50%), Gaps = 11/353 (3%)

Query: 20  KSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           K  +  +Y    + +F+  P+R+ V +N ++    ++ +H++AL +   +    L     
Sbjct: 178 KKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSF 237

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TLSSVL       + + G+++H   +++G+  DV + +SL+D+Y +   V+D  RVF  +
Sbjct: 238 TLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYML 297

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + + +SW S+++G  +N M D  L+ F +M +  IKPN  +FS+++   A    +    
Sbjct: 298 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  +I++  +    + +AL+ MY K   +R AR +FD ME  D ++W +M+ GY  + 
Sbjct: 358 QLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG 417

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A   F  M + G +     F++V+  C+    +  A +       N +  D+ I  
Sbjct: 418 HAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYF-----NSMTQDYRIIP 472

Query: 320 GL----MVA--YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           GL     VA    + G++E+A +  S M        W+ +++    +  I+LA
Sbjct: 473 GLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELA 525



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 188/389 (48%), Gaps = 42/389 (10%)

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           ++ K    A+QLH+Q+L+  +     + T L + YS    + D+  IF+ +      ++W
Sbjct: 16  SSVKSKSQAKQLHAQILRTSLPSPSLLSTILSI-YSNLNLLHDSLLIFNSLPSPPTTLAW 74

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
            ++I  +  +G    +++FF QM   G  P+   +  +L +   +   +    VH  II+
Sbjct: 75  KSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIR 134

Query: 407 TNYEKSFSVGTALLNAYVK----------KGILDEAA-------------------KVFE 437
                      AL+N Y K          K + DE                     KVFE
Sbjct: 135 LGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFE 194

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
           ++ ++DIV+W+ +++G AQ G  E A+ + R++ +  ++P+ FT SSV+    A    + 
Sbjct: 195 MMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL-PIFAEYVNLL 253

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
           +GK+ H  +I+   +  + + S+L+ MY+K   ++ +  VF    + D +SWNS+I G  
Sbjct: 254 KGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCV 313

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIY 614
           Q+G   + L+ F++M    ++ + ++F  ++ AC H   +  G+Q    ++    + +++
Sbjct: 314 QNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVF 373

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
                 S +VD+Y++ G +  A  I ++M
Sbjct: 374 IA----SALVDMYAKCGNIRTARWIFDKM 398


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/812 (32%), Positives = 451/812 (55%), Gaps = 49/812 (6%)

Query: 69  IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN-------VSTSLVD 121
           I R G+     + + +LK CG L D   G+++H +  +SG   D         +   LV 
Sbjct: 5   ISRSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQ 64

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +    ++ +R FD +   N+ SWTS+L  Y    ++ + LE FH+M   G++P+   
Sbjct: 65  MYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV 124

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F   L V      +     +H  +     +    + NAL+SMY K   +  A+ +FD +E
Sbjct: 125 FLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLE 184

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            ++ I+W  +V+ +  N    E +    +M + G +  +   ++++ +C++   L     
Sbjct: 185 MKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSW 244

Query: 302 L-HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV--SWTAMISGHL 358
           + H  ++ +G+D +  + T L+  +++CG+++ A +IF  + +    V   W AMI+ + 
Sbjct: 245 MAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYA 304

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFS 414
             G    A+     +  +GV+PN  T+   +++  A S  Q    +H  I ++ +++  S
Sbjct: 305 HRGCSKEALFLLDSLQLQGVKPNCITF---ISSLGACSSLQDGRALHLLIDESGFDREVS 361

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V  AL+  Y + G L ++AK+F  + EKD+ +W++ +A +A  G ++  +K+  Q+  EG
Sbjct: 362 VANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEG 421

Query: 475 -VKPNEFTFSSVINACTA---PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
            ++P+  T  + ++AC     PS++    K+ H  + +  L +  CV++ LV MY K G+
Sbjct: 422 GLEPSSVTLVTAMSACGGLADPSSS----KRVHERARELGLESETCVANGLVDMYGKAGD 477

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           +++A  +F R  +R++ +WN+M   Y Q G T+  L + + M+R     D +TF+ +++ 
Sbjct: 478 VDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSV 537

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA--AS 648
           C H+GL++E +  F  M  E  I P+ +HYSC++DL +RAG L++A D I R+  +  AS
Sbjct: 538 CGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPAS 597

Query: 649 ATVWRTVLAACRLIS------------------LQP---HD-SAIYVLLSNMYAATGHWQ 686
           + +W  +L ACR +                   ++P   HD SA +V L+N+ AA+G+W 
Sbjct: 598 SPMWMALLGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWD 657

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           E   +RK M ++ ++KE G S I VKN+ + F+AGD  HP+  +IY++L  L   + D G
Sbjct: 658 EALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRG 717

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y  DT  V  ++ +  K  +L  HSE+LA+AFG+++TP G+ L+I+KNLR CGDCHT IK
Sbjct: 718 YVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIK 777

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LIS +E R+IVVRD+NRFHHF+ G CSCGDYW
Sbjct: 778 LISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 809



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 240/518 (46%), Gaps = 13/518 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q  FD    +N   +  +L  Y    LH +AL  F  + + G+        + L  CG L
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 135

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G  +H +        D+ +  +LV +Y +   ++  +++FD +   NV+SWT L+
Sbjct: 136 KRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILV 195

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV-ATAVQVHTMVIKNGG 210
           S +A N        L   M VEGIKP+     T+L V +  G++   +   H  ++ +G 
Sbjct: 196 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGL 255

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT---WNSMVAGYVTNELHMEAFET 267
           +    V  AL+SM+ +   V  AR +F+ + D  +     WN+M+  Y       EA   
Sbjct: 256 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 315

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            +++ L G +    TF+S +  C++ ++    R LH  + ++G D + ++   L+  Y +
Sbjct: 316 LDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVSVANALVTMYGR 372

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYS 386
           CG + D++K+FS M E KD+ SW + I+ H  +G  D  +    QM  E G+ P+  T  
Sbjct: 373 CGSLLDSAKLFSEMAE-KDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLV 431

Query: 387 IILTAQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             ++A   +    S  +VH    +   E    V   L++ Y K G +D A  +F+    +
Sbjct: 432 TAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRR 491

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           ++  W+AM   Y Q G T G + + R +  +G +P+  TF S+++ C       E    F
Sbjct: 492 NVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNF 551

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
            A   +  ++ +    S ++ + ++ G ++ A +   R
Sbjct: 552 VAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIAR 589


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/752 (33%), Positives = 418/752 (55%), Gaps = 27/752 (3%)

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           ++ F+ D+ +S      Y+++ N+   RR+FDD +E  VV+WT+++  Y+++       +
Sbjct: 72  RNSFSIDIIISG-----YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFK 126

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           LF  M   G +P+  T+ T+L    D  +     Q H  ++K G  +   VCN L+  Y 
Sbjct: 127 LFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYF 186

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K+  +  AR +F  M   DS+++N M+ GY  N L+ EA E F  M   G + +  TF +
Sbjct: 187 KTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAA 246

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           VI       +    +Q+H  V+K     +  +    +  YSK   + +  K+F+ M E+ 
Sbjct: 247 VISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPEL- 305

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VH 401
           D VS+  +I+ +   G +  +++ F ++         F +  +L+   +    Q    +H
Sbjct: 306 DGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLH 365

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           A ++ +  +  F V  +L++ Y K G  +EA ++F  +  +  V W+AM++   Q G  E
Sbjct: 366 AQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHE 425

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
             +K++ ++    V  ++ TF+ V+ A +A  A++  GKQ H+C I++   N      AL
Sbjct: 426 NGLKLFYEMRRANVSADQATFACVLKA-SANLASILLGKQLHSCVIRSGFMNVYS-GCAL 483

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + MY+   +I+ A + F+   +R++V+WN+++  YAQ+G  K  L+ F+EM     + D 
Sbjct: 484 LDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDS 543

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           ++F+ ++TAC+H  LV+EG +YF+ M   +++ P  EHY+ MVD   R+G  ++A  ++ 
Sbjct: 544 VSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMG 603

Query: 642 RMPFAASATVWRTVLAACR--------------LISLQP-HDSAIYVLLSNMYAATGHWQ 686
           +MPF     VW +VL +CR              L +++   D+A YV +SN++A  G W 
Sbjct: 604 QMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWD 663

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
              +V+K M DR V+K   YSW+E+K+K + F A D  HPQ  +I  K+E L+ +++  G
Sbjct: 664 SVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEG 723

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PD S   Q++D E K   L  HSERLAIAF L+ TP G+P+ ++KNLR C DCH  IK
Sbjct: 724 YDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIK 783

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +ISK+  R+I VRD+NRFHHF++G CSCGDYW
Sbjct: 784 VISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 263/525 (50%), Gaps = 7/525 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD + +R  V +  ++  Y + +   +A  LF  + R G      T  ++L  C  L  
Sbjct: 96  IFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEV 155

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                Q H + VK G   +  V  +L+D Y +T  ++  RR+F +M   + VS+  +++G
Sbjct: 156 AKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITG 215

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA N +N+  +ELF  MQ  G KP+ FTF+ V+         A   Q+H  V+K      
Sbjct: 216 YANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRN 275

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V NA +  Y K   V + R +F+ M + D +++N ++  Y       E+ + F  +  
Sbjct: 276 VFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQF 335

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +     F +++ + A++ +L++ RQLH+QV+ +  D D  +   L+  Y+KCGK E+
Sbjct: 336 TTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEE 395

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A +IF  +   +  V WTAMIS ++Q G  +  +  F +M R  V  +  T++ +L A  
Sbjct: 396 ADRIFLRLSS-RSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASA 454

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++      Q+H+ +I++ +   +S G ALL+ Y     + +A K FE + E+++V W+A
Sbjct: 455 NLASILLGKQLHSCVIRSGFMNVYS-GCALLDMYANCASIKDAIKTFEEMSERNVVTWNA 513

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +L+ YAQ GD +G +K + ++   G +P+  +F  ++ AC+      E  K F+  S   
Sbjct: 514 LLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVY 573

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
            L       +A+V    + G  + A ++  +   + D + W S++
Sbjct: 574 NLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVL 618



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 241/495 (48%), Gaps = 44/495 (8%)

Query: 201 VHTMVIKNGGEVVTS--------------VCNA-----------------LISMYLKSKM 229
           +   ++K G + +TS              +C A                 +IS Y+KS  
Sbjct: 30  IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           +  AR +FD  ++R  + W +M+  Y  +    +AF+ F  M  +G++    T+++++  
Sbjct: 90  LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTG 149

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C   +  +   Q H+Q++K G   +H +   L+ +Y K G ++ A ++F  M    D VS
Sbjct: 150 CNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGW-DSVS 208

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV--SPF--QVHAHII 405
           +  MI+G+  NG  + A+  F +M   G +P+ FT++ +++A   +  + F  Q+H  ++
Sbjct: 209 FNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVV 268

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           KT++ ++  VG A L+ Y K   ++E  K+F  + E D V+++ ++  YA +G  + ++ 
Sbjct: 269 KTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESID 328

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++++L         F F +++ +  A S  ++ G+Q HA  + +  +    VS++LV MY
Sbjct: 329 LFQELQFTTFDRKNFPFPTML-SIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMY 387

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           +K G  E A  +F R   R  V W +MI    Q G  +  L++F EMRR ++  D  TF 
Sbjct: 388 AKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFA 447

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS--CMVDLYSRAGMLEKAMDIINRM 643
            V+ A  +   +  G+Q    ++        M  YS   ++D+Y+    ++ A+     M
Sbjct: 448 CVLKASANLASILLGKQLHSCVIRSGF----MNVYSGCALLDMYANCASIKDAIKTFEEM 503

Query: 644 PFAASATVWRTVLAA 658
               +   W  +L+A
Sbjct: 504 S-ERNVVTWNALLSA 517



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 169/347 (48%), Gaps = 29/347 (8%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK D     + LF+  P+ + V YN ++  Y      +E+++LF  ++          
Sbjct: 285 FYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFP 344

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
             ++L       D   GRQ+H + V S    D  VS SLVD+Y +    E+  R+F  ++
Sbjct: 345 FPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLS 404

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + V WT+++S   +  +++  L+LF+ M+   +  +  TF+ VL   A+   +    Q
Sbjct: 405 SRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQ 464

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H+ VI++G   V S C AL+ MY     ++DA   F+ M +R+ +TWN++++ Y  N  
Sbjct: 465 LHSCVIRSGFMNVYSGC-ALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGD 523

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-- 318
                ++F  M ++G +    +F+ ++  C+           H ++++ G+ + +++   
Sbjct: 524 GKGTLKSFEEMIMSGYQPDSVSFLCILTACS-----------HCRLVEEGLKYFNDMSGV 572

Query: 319 ----------TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
                     T ++ A  + G+ ++A K+   M    D + WT++++
Sbjct: 573 YNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLN 619


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/656 (38%), Positives = 386/656 (58%), Gaps = 24/656 (3%)

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
           +V+       T + N LI+MY     V  A  +FD M   + ++W ++V+G   N +H +
Sbjct: 43  LVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRD 102

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   F++M  AG   T+    S  +  A         QLH   ++ G D +  + + L  
Sbjct: 103 ALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLAD 162

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNG 382
            YSK G + +A ++F  M + KD V+WTAMI G+ +NG ++ AV  F  M REG V  + 
Sbjct: 163 MYSKSGLLVEACRVFDQMPQ-KDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQ 221

Query: 383 FTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
                +L+A   +        +H+ ++K+ +E+  +V  AL + Y K   +D AA+V + 
Sbjct: 222 HVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVK- 280

Query: 439 IDEK--DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           ID+   ++V+ ++++ GY +    E A+ ++ +L  +GV+PNEFTFSS+I  C A  A +
Sbjct: 281 IDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGC-AMQALL 339

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           EQG Q HA  IK  L +   VSS L+ MY K G I  + ++FK       ++WN+ I   
Sbjct: 340 EQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVL 399

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           AQHGH ++A+  F  M    +  + ITF+ ++TAC+HAGLVDEG +YF  M + H I P 
Sbjct: 400 AQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPK 459

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------I 662
            EHYSC++D+Y RAG L++A   I  MP   +A  W ++L ACR+              +
Sbjct: 460 GEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMM 519

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            L+P ++ ++V LS +YA+ G W++   VRKLM D ++KK  G+SW++   KT+ F + D
Sbjct: 520 KLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGFSWVDSNKKTHVFGSED 579

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
            SHPQ  +IY KLEEL  R+K+ GY PDT ++  +++D  K+ IL  HSER+A+AF L++
Sbjct: 580 WSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRILRYHSERIAVAFALIS 639

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            PA  P+ + KNLR+C DCH+ +K ISK+E RDI+VRD +RFHHF +G CSCGDYW
Sbjct: 640 MPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 248/486 (51%), Gaps = 19/486 (3%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           L++ L++CG   D   GR +H   V SG A     ++  L+ +Y    +V    R+FD M
Sbjct: 20  LAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAM 79

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              N+VSWT+L+SG  +N M+   L  F  M   G+ P  F  S+     A         
Sbjct: 80  PRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGA 139

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN- 258
           Q+H + ++ G +    V + L  MY KS ++ +A  VFD M  +D++ W +M+ GY  N 
Sbjct: 140 QLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNG 199

Query: 259 --ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
             E  + AF      GL GA+  +    SV+      K+  LAR +HS V+K+G + +  
Sbjct: 200 NLEAAVIAFRDMRREGLVGAD--QHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVA 257

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +R  L   Y+K   M++A+++  + +   +VVS T++I G+++   I+ A+  F ++ R+
Sbjct: 258 VRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQ 317

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           GV PN FT+S ++      +      Q+HA +IKT+      V + LL+ Y K G++  +
Sbjct: 318 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLS 377

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            ++F+ I+    +AW+A +   AQ G    A++ + ++TS G++PN  TF S++ AC+  
Sbjct: 378 IQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHA 437

Query: 493 SAAVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLV 547
               E  K F++      I+ K  +  C+    + MY + G ++ A + + +   K +  
Sbjct: 438 GLVDEGLKYFYSMKDHHGIEPKGEHYSCI----IDMYGRAGRLDEAEKFIGEMPVKPNAY 493

Query: 548 SWNSMI 553
            W S++
Sbjct: 494 GWCSLL 499



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 220/446 (49%), Gaps = 29/446 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+ N V +  L+    ++S+H++AL  F  + R GL      LSS  +    L  
Sbjct: 75  LFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAA 134

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+HC  V+ GF  ++ V+++L D+Y ++  + +  RVFD M + + V+WT+++ G
Sbjct: 135 RHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDG 194

Query: 154 YARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNG 209
           YA+N   +  +  F  M+ EG +  +     +VL   G L D G +A A  +H+ V+K+G
Sbjct: 195 YAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKD-GWLARA--IHSCVMKSG 251

Query: 210 GEVVTSVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
            E   +V NAL  MY K + M   AR V       + ++  S++ GY+  +   +A   F
Sbjct: 252 FEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMF 311

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             +   G E    TF S+IK CA    L    QLH++V+K  +  D  + + L+  Y KC
Sbjct: 312 IELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKC 371

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  + ++F  +    D ++W A I+   Q+G    A+  F +MT  G+RPN  T+  +
Sbjct: 372 GLISLSIQLFKEIEYHTD-IAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDEAAK-V 435
           LTA         HA ++    +  +S+             + +++ Y + G LDEA K +
Sbjct: 431 LTACS-------HAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFI 483

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTE 461
            E+  + +   W ++L      G+ E
Sbjct: 484 GEMPVKPNAYGWCSLLGACRMRGNKE 509


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 372/593 (62%), Gaps = 22/593 (3%)

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E    M + G E+    + +++  C + + +R  +++H+ ++K        +RT L+V Y
Sbjct: 76  EALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 135

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           +KC  + DA ++F  M + K+VVSWTAMIS + Q G    A+N F +M R    PN FT+
Sbjct: 136 NKCDCLGDAREMFDEMPQ-KNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTF 194

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + ILT+      F    Q+H+  IK NYE    VG++LL+ Y K G + +A  VF  + E
Sbjct: 195 ATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE 254

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+VA +A+++GYAQ+G  E A+K++RQL  EG+  N  T++SV+ A +   AA+  GKQ
Sbjct: 255 RDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSG-LAALNHGKQ 313

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H+  +++   + + + ++L+ MYSK GN+  A  +F    +R  +SWN+M+ GY++HG 
Sbjct: 314 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 373

Query: 562 TKKALEVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMVN-EHHIYPTMEH 619
            ++ LE+FK MR ++ ++ D IT++ V++ C+H  L D G + F  MVN +  I P + H
Sbjct: 374 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 433

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y C+VDL  RAG +E+A D I +MPF  +A +W ++L +CR              L+ L+
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELE 493

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P ++  YV+LSN+YA+ G W++   +R LM ++ V KE G SW+E+    ++F A D +H
Sbjct: 494 PENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTH 553

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+  ++  K++ELS + K+ GY PD S VL D+D+E KE +L  HSE+LA+AFGL+ATP 
Sbjct: 554 PRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPE 613

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G  ++++KNLR+C DCH+  K +S+L  R +++RD NRFH+   G+CSCGDYW
Sbjct: 614 GTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 2/296 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH   +K+ +   V + T L+ LY + + + D R +FD+M + NVVSWT+++S Y++
Sbjct: 109 GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQ 168

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  L LF  M     +PN FTF+T+L          T  Q+H++ IK   E    V
Sbjct: 169 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFV 228

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY KS  + DA  VF  + +RD +   ++++GY    L  EA + F  + + G 
Sbjct: 229 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 288

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                T+ SV+   +    L   +Q+HS VL++G      +   L+  YSKCG +  A +
Sbjct: 289 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 348

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTA 391
           IF  M E +  +SW AM+ G+ ++G     +  F  M  E  V+P+  TY  +L+ 
Sbjct: 349 IFDSMPE-RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSG 403



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 174/337 (51%), Gaps = 8/337 (2%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            Y+K D     + +FD  PQ+N V +  ++  Y +     EALNLF+ + R        T
Sbjct: 134 LYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFT 193

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +++L +C        GRQ+H   +K  +   + V +SL+D+Y ++  + D   VF  + 
Sbjct: 194 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E +VV+ T+++SGYA+  +++  L+LF ++Q+EG+  NS T+++VL  L+    +    Q
Sbjct: 254 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 313

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH+ V+++G      + N+LI MY K   V  AR +FD M +R  I+WN+M+ GY  + +
Sbjct: 314 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 373

Query: 261 HMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVL--KNGIDFDHNI 317
             E  E F  M         S T+++V+  C+  +   +  ++   ++  K+GI+ D   
Sbjct: 374 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 433

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
              ++    + G++E+A      M  +     W +++
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL 470


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 268/694 (38%), Positives = 394/694 (56%), Gaps = 22/694 (3%)

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           L  F  M   G  P   TF+++L + A  G +AT   VH  +   G +       AL +M
Sbjct: 44  LAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM 103

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-T 282
           Y K +   DAR VFD M  RD + WN++VAGY  N L   A E    M     E   S T
Sbjct: 104 YAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT 163

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
            VSV+  CA  + L   R+ H+  +++G++   N+ T ++ AY KCG +  A  +F  M 
Sbjct: 164 LVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM- 222

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PF 398
             K+ VSW AMI G+ QNG    A+  F +M  EGV     +    L A   +       
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           +VH  +++   + + SV  AL+  Y K   +D A+ VF+ +D +  V+W+AM+ G AQ G
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            +E AV+++ ++  E VKP+ FT  SVI A    S  + Q +  H  SI+  L+  + V 
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPL-QARWIHGYSIRLHLDQDVYVL 401

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +AL+ MY+K G +  A  +F   R+R +++WN+MI GY  HG  K A+E+F+EM+   + 
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            +  TF+ V++AC+HAGLVDEG++YF  M  ++ + P MEHY  MVDL  RAG L++A  
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521

Query: 639 IINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGH 684
            I +MP     +V+  +L AC+L                L P +   +VLL+N+YA    
Sbjct: 522 FIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASM 581

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W++ ARVR  M    ++K  G+S I++KN+ ++F +G  +H Q+ +IYS+L +L   +K 
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            GY PDT  +  D++D+ K  +L+ HSE+LAIAFGL+ T  G  +QI KNLRVC DCH  
Sbjct: 642 VGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KLIS +  R+I++RD  RFHHFK+G CSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/446 (32%), Positives = 246/446 (55%), Gaps = 7/446 (1%)

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           AL  F+ +   G P    T +S+LK C    D   GR VH +    G   +   +T+L +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNSF 180
           +Y +     D RRVFD M   + V+W +L++GYARN +    +E+  RMQ  EG +P+S 
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           T  +VL   A+   +A   + H   I++G E + +V  A++  Y K   +R AR VFD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             ++S++WN+M+ GY  N    EA   FN M   G ++T  + ++ ++ C     L    
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H  +++ G+D + ++   L+  YSKC +++ AS +F  + + +  VSW AMI G  QN
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL-DRRTQVSWNAMILGCAQN 341

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-PFQ---VHAHIIKTNYEKSFSVG 416
           G  + AV  F +M  E V+P+ FT   ++ A   +S P Q   +H + I+ + ++   V 
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           TAL++ Y K G ++ A  +F    E+ ++ W+AM+ GY   G  + AV+++ ++ S G+ 
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQF 502
           PNE TF SV++AC+  +  V++G+++
Sbjct: 462 PNETTFLSVLSACS-HAGLVDEGREY 486



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 191/370 (51%), Gaps = 5/370 (1%)

Query: 23  RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTL 81
           R P  +++   +FDR P R+ V +N L+  Y R+ L + A+ + + ++   G      TL
Sbjct: 108 RRPADARR---VFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITL 164

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
            SVL  C         R+ H   ++SG    VNV+T+++D Y +  ++   R VFD M  
Sbjct: 165 VSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPT 224

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            N VSW +++ GYA+N  +   L LF+RM  EG+     +    L    + G +   ++V
Sbjct: 225 KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRV 284

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H ++++ G +   SV NALI+MY K K V  A  VFD ++ R  ++WN+M+ G   N   
Sbjct: 285 HELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCS 344

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +A   F  M L   +    T VSVI   A   +   AR +H   ++  +D D  + T L
Sbjct: 345 EDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTAL 404

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+KCG++  A  +F+  RE + V++W AMI G+  +G    AV  F +M   G+ PN
Sbjct: 405 IDMYAKCGRVNIARILFNSARE-RHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPN 463

Query: 382 GFTYSIILTA 391
             T+  +L+A
Sbjct: 464 ETTFLSVLSA 473



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 2/141 (1%)

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A L   A   D   A+  +  ++S G  P   TF+S++  C A    +  G+  HA    
Sbjct: 29  ARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAA-RGDLATGRAVHAQLAA 87

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             +++    ++AL  MY+K      A  VF R   RD V+WN+++ GYA++G  + A+E+
Sbjct: 88  RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147

Query: 569 FKEMRRQDLEF-DGITFIGVI 588
              M+ ++ E  D IT + V+
Sbjct: 148 VVRMQEEEGERPDSITLVSVL 168


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 372/593 (62%), Gaps = 22/593 (3%)

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E    M + G E+    + S++  C + + +R  +++H+ ++K        +RT L+V Y
Sbjct: 48  EALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 107

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           +KC  + DA  +F  M + ++VVSWTAMIS + Q G    A+N F +M R    PN FT+
Sbjct: 108 NKCDCLGDARGMFDEMPQ-RNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTF 166

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + ILT+      F    Q+H+  IK NYE    VG++LL+ Y K G + +A  VF  + E
Sbjct: 167 ATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE 226

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+VA +A+++GYAQ+G  E A+K++RQL  EG+  N  T++SV+ A +   AA+  GKQ
Sbjct: 227 RDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSG-LAALNHGKQ 285

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H+  +++   + + + ++L+ MYSK GN+  A  +F    +R  +SWN+M+ GY++HG 
Sbjct: 286 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 345

Query: 562 TKKALEVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMVN-EHHIYPTMEH 619
            ++ LE+FK MR ++ ++ D IT++ V++ C+H  L D G + F  MVN +  I P + H
Sbjct: 346 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 405

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y C+VDL  RAG +E+A D I +MPF  +A +W ++L +CR              L+ L+
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELE 465

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P ++  YV+LSN+YA+ G W++   +R LM ++ V KE G SW+E+    ++F A D +H
Sbjct: 466 PENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTH 525

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+  ++ +K++ELS + K+ GY PD S VL D+D+E KE +L  HSE+LA+AFGL+ATP 
Sbjct: 526 PRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPE 585

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G  ++++KNLR+C DCH+  K +S+L  R +++RD NRFH+   G+CSCGDYW
Sbjct: 586 GTTIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 153/296 (51%), Gaps = 2/296 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH   +K+ +   V + T L+ LY + + + D R +FD+M + NVVSWT+++S Y++
Sbjct: 81  GQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQ 140

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  L LF  M     +PN FTF+T+L          T  Q+H++ IK   E    V
Sbjct: 141 RGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFV 200

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY KS  + DA  VF  + +RD +   ++++GY    L  EA + F  + + G 
Sbjct: 201 GSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGM 260

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                T+ SV+   +    L   +Q+HS VL++G      +   L+  YSKCG +  A +
Sbjct: 261 NSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARR 320

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTA 391
           IF  M E +  +SW AM+ G+ ++G     +  F  M  E  V+P+  TY  +L+ 
Sbjct: 321 IFDSMPE-RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSG 375



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 174/337 (51%), Gaps = 8/337 (2%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            Y+K D     + +FD  PQRN V +  ++  Y +     EALNLF+ + R        T
Sbjct: 106 LYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFT 165

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +++L +C        GRQ+H   +K  +   + V +SL+D+Y ++  + D   VF  + 
Sbjct: 166 FATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E +VV+ T+++SGYA+  +++  L+LF ++Q+EG+  NS T+++VL  L+    +    Q
Sbjct: 226 ERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQ 285

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH+ V+++G      + N+LI MY K   V  AR +FD M +R  I+WN+M+ GY  + +
Sbjct: 286 VHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGM 345

Query: 261 HMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVL--KNGIDFDHNI 317
             E  E F  M         S T+++V+  C+  +   +  ++   ++  K+GI+ D   
Sbjct: 346 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 405

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
              ++    + G++E+A      M  +     W +++
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLL 442


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/694 (38%), Positives = 394/694 (56%), Gaps = 22/694 (3%)

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           L  F  M   G  P   TF+++L + A  G +AT   VH  +   G +       AL +M
Sbjct: 44  LAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANM 103

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-T 282
           Y K +   DAR VFD M  RD + WN++VAGY  N L   A E    M     E   S T
Sbjct: 104 YAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT 163

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
            VSV+  CA  + L   R+ H+  +++G++   N+ T ++ AY KCG +  A  +F  M 
Sbjct: 164 LVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM- 222

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PF 398
             K+ VSW AMI G+ QNG    A+  F +M  EGV     +    L A   +       
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           +VH  +++   + + SV  AL+  Y K   +D A+ VF+ +D +  V+W+AM+ G AQ G
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            +E AV+++ ++  E VKP+ FT  SVI A    S  + Q +  H  SI+  L+  + V 
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPL-QARWIHGYSIRLHLDQDVYVL 401

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +AL+ MY+K G +  A  +F   R+R +++WN+MI GY  HG  K A+E+F+EM+   + 
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            +  TF+ V++AC+HAGLVDEG++YF  M  ++ + P MEHY  MVDL  RAG L++A  
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521

Query: 639 IINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGH 684
            I +MP     +V+  +L AC+L                L P +   +VLL+N+YA    
Sbjct: 522 FIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASM 581

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W++ ARVR  M    ++K  G+S I++KN+ ++F +G  +H Q+ +IYS+L +L   +K 
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            GY PDT  +  D++D+ K  +L+ HSE+LAIAFGL+ T  G  +QI KNLRVC DCH  
Sbjct: 642 VGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KLIS +  R+I++RD  RFHHFK+G CSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 145/446 (32%), Positives = 246/446 (55%), Gaps = 7/446 (1%)

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           AL  F+ +   G P    T +S+LK C    D   GR VH +    G   +   +T+L +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNSF 180
           +Y +     D RRVFD M   + V+W +L++GYARN +    +E+  RMQ  EG +P+S 
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           T  +VL   A+   +A   + H   I++G E + +V  A++  Y K   +R AR VFD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             ++S++WN+M+ GY  N    EA   FN M   G ++T  + ++ ++ C     L    
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H  +++ G+D + ++   L+  YSKC +++ AS +F  + + +  VSW AMI G  QN
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL-DRRTQVSWNAMILGCAQN 341

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-PFQ---VHAHIIKTNYEKSFSVG 416
           G  + AV  F +M  E V+P+ FT   ++ A   +S P Q   +H + I+ + ++   V 
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           TAL++ Y K G ++ A  +F    E+ ++ W+AM+ GY   G  + AV+++ ++ S G+ 
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQF 502
           PNE TF SV++AC+  +  V++G+++
Sbjct: 462 PNETTFLSVLSACS-HAGLVDEGREY 486



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 191/370 (51%), Gaps = 5/370 (1%)

Query: 23  RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTL 81
           R P  +++   +FDR P R+ V +N L+  Y R+ L + A+ + + ++   G      TL
Sbjct: 108 RRPADARR---VFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITL 164

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
            SVL  C         R+ H   ++SG    VNV+T+++D Y +  ++   R VFD M  
Sbjct: 165 VSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPT 224

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            N VSW +++ GYA+N  +   L LF+RM  EG+     +    L    + G +   ++V
Sbjct: 225 KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRV 284

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H ++++ G +   SV NALI+MY K K V  A  VFD ++ R  ++WN+M+ G   N   
Sbjct: 285 HELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCS 344

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +A   F  M L   +    T VSVI   A   +   AR +H   ++  +D D  + T L
Sbjct: 345 EDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTAL 404

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+KCG++  A  +F+  RE + V++W AMI G+  +G    AV  F +M   G+ PN
Sbjct: 405 IDMYAKCGRVNIARILFNSARE-RHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPN 463

Query: 382 GFTYSIILTA 391
             T+  +L+A
Sbjct: 464 ETTFLSVLSA 473



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 2/131 (1%)

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
           D   A+  +  ++S G  P   TF+S++  C A    +  G+  HA      +++    +
Sbjct: 39  DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAA-RGDLATGRAVHAQLAARGIDSEALAA 97

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +AL  MY+K      A  VF R   RD V+WN+++ GYA++G  + A+E+   M+ ++ E
Sbjct: 98  TALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE 157

Query: 579 F-DGITFIGVI 588
             D IT + V+
Sbjct: 158 RPDSITLVSVL 168


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 282/832 (33%), Positives = 445/832 (53%), Gaps = 28/832 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKT 87
           +  + +FD  P+ +   +  L+  Y      +EA++L+   + +    +      SVLK 
Sbjct: 50  ESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKA 109

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C    D   G +VH   +K GF  D  V TSL+ +Y   + ++D  + FD M   +VV+W
Sbjct: 110 CSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAW 169

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +S++  + +N      L++F +M  E ++P+S T  +V    ++ G +     VH  V++
Sbjct: 170 SSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVR 229

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E   S+ N+LI MY K   +  A  +F+ +  R +  W  M++ Y  +    EA   
Sbjct: 230 REIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNV 289

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYS 326
           F  M     E  + T V V+  CA    ++  R +H  V++  +D + + +   LM  Y+
Sbjct: 290 FAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYA 349

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
             G + D  K+F  ++E K ++SW  +IS   +NG  + A+  F QM  +G+ P+ ++ +
Sbjct: 350 DTGNLRDCHKVFETIKE-KTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLA 408

Query: 387 IILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             L+A   +S      Q+H +IIKT     F V  AL++ Y K G +  A K+FE I EK
Sbjct: 409 SSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEK 467

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            +V W++M+ G++Q G +  A+ ++ Q+    VK ++ TF SVI AC+     +E+GK  
Sbjct: 468 SLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHL-GYLEKGKWV 526

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H   I   L     + +AL  MYSK G ++ A  VF R  +R +VSW+ MI GY  HG  
Sbjct: 527 HHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQI 586

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
              + +F +M    ++ + ITF+ +++AC+HAG V+EG+ YF+ M +E  + P  +H++C
Sbjct: 587 NATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFAC 645

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           MVDL SRAG L  A  II  +PF A++++W  +L  CR              L+ +   D
Sbjct: 646 MVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTAD 705

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           +  Y LLSN+YA  G W +  +VR +M  + ++K  GYS IE+  K Y F  GD SH Q+
Sbjct: 706 TGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQT 765

Query: 729 NQIYSKLEELSTRLKDAGY--KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
             IY  LE   + +    Y  +PD S V       +KE  +  HSE+LAIAFG++ T  G
Sbjct: 766 KDIYRFLENFRSLVHAQVYDSEPDNSIV--GTSKFNKENNVVSHSEKLAIAFGIINTRPG 823

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             L+I KNLRVC DCH+  K+ SK+  R+I++RD NRFH F+ G CSC DYW
Sbjct: 824 TTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 170/593 (28%), Positives = 300/593 (50%), Gaps = 22/593 (3%)

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
           L +PLF    +S   T           Q+H     +G  R    ST L++ Y +    E 
Sbjct: 3   LYMPLFRRCATSTTLT-----------QLHAHLFITGLHRHPPASTKLIESYAQIGIFES 51

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLA 190
            +RVFD   + +   W  L+  Y      +  + L+H M  +   + ++F F +VL   +
Sbjct: 52  SKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACS 111

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
             G ++   +VH  VIK G E    V  +L+ MY +   + DA   FD M  RD + W+S
Sbjct: 112 GFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSS 171

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           +V  +V N    E  + F+ M     E    T +SV + C+    LRL R +H  V++  
Sbjct: 172 IVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRRE 231

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           I+ + ++   L+V Y K G +  A ++F  +   +    WT MIS + Q+G    A+N F
Sbjct: 232 IESNASLNNSLIVMYGKLGDLYSAERLFENV-PCRMTAPWTPMISCYNQSGCFQEALNVF 290

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFS-VGTALLNAYVK 425
            +M    + PN  T   +L A   +   +    VH  +I+   +     +G AL+  Y  
Sbjct: 291 AKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYAD 350

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G L +  KVFE I EK I++W+ +++ + + G  E A+ ++ Q+ ++G+ P+ ++ +S 
Sbjct: 351 TGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASS 410

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           ++AC   S + + G Q H   IK    N   V +AL+ MY+K G + SA+++F++ +++ 
Sbjct: 411 LSACGTISFS-QLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKS 468

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           LV+WNSMICG++Q+G++ +A+ +F +M    ++ D +TF+ VI AC+H G +++G+    
Sbjct: 469 LVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHH 528

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            ++  + +       + + D+YS+ G L+ A  + +RM    S   W  ++A 
Sbjct: 529 KLI-MYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAG 579


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/578 (41%), Positives = 356/578 (61%), Gaps = 21/578 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + S I  CA +K L  AR++H+ +  +    D  +   L+  Y KC  + DA  +F
Sbjct: 50  TPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVF 109

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             MR  KD+VSWT++I+G+ QN     A+     M +   +PNGFT++ +L A  A +  
Sbjct: 110 DQMRR-KDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA  +K  + +   VG+ALL+ Y + G +D A  VF+ +D K+ V+W+A+++G+
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ GD E A+  + ++   G +   FT+SSV ++  A   A+EQGK  HA  IK++    
Sbjct: 229 ARKGDGESALMTFAEMLRNGFEATHFTYSSVFSS-IARLGALEQGKWVHAHVIKSRQKLT 287

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V + L+ MY+K G++  A +VF R   +DLV+WNSM+  +AQ+G  K+A+  F+EMR+
Sbjct: 288 AFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  + ITF+ ++TAC+H GLV EG++YF++M  E+ + P ++HY  +V L  RAG+L 
Sbjct: 348 SGVYLNQITFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYVTVVALLGRAGLLN 406

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
            A+  I +MP   +A VW  +LAACR+                L P DS   VLL N+YA
Sbjct: 407 YALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYA 466

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +TG W   ARVR +M    VKKE   SW+E++N  + F+A D +HPQ+ +IY    E+S 
Sbjct: 467 STGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISK 526

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           +++  GY PD  YVL  +DD+ KEA L  HSE+LA+AF L+  PAGA ++I+KN+R+CGD
Sbjct: 527 KIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGD 586

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH+  K ISK+  R+IVVRDTNRFHHF  G CSCGDYW
Sbjct: 587 CHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 156/298 (52%), Gaps = 7/298 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R++H     S FA D  +  SL+ +Y +  +V D R VFD M   ++VSWTSL++GYA+
Sbjct: 70  ARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQ 129

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVV 213
           N M    + L   M     KPN FTF+++L   G  AD G   T  Q+H + +K G    
Sbjct: 130 NDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSG---TGRQIHALAVKCGWHED 186

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +AL+ MY +   +  A AVFD ++ ++ ++WN++++G+        A  TF  M  
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLR 246

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E T  T+ SV    A    L   + +H+ V+K+       +   L+  Y+K G M D
Sbjct: 247 NGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMID 306

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           A K+F  + + KD+V+W +M++   Q G    AV+ F +M + GV  N  T+  ILTA
Sbjct: 307 ARKVFDRV-DNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTA 363



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 189/412 (45%), Gaps = 48/412 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD+  +++ V +  L+  Y ++ +  EA+ L  G+ +      G T +S+LK  G  
Sbjct: 106 RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAY 165

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GRQ+H   VK G+  DV V ++L+D+Y R   ++    VFD ++  N VSW +L+
Sbjct: 166 ADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG+AR    +  L  F  M   G +   FT+S+V   +A  G +     VH  VIK+  +
Sbjct: 226 SGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQK 285

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N L+ MY KS  + DAR VFD ++++D +TWNSM+  +    L  EA   F  M
Sbjct: 286 LTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G  L + TF+ ++  C+           H  ++K G                     
Sbjct: 346 RKSGVYLNQITFLCILTACS-----------HGGLVKEG--------------------- 373

Query: 332 EDASKIFSMMREM---KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
               + F MM+E     ++  +  +++   + G ++ A+ F  +M  E   P    +  +
Sbjct: 374 ---KRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPME---PTAAVWGAL 427

Query: 389 LTA-----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           L A        V  F    H+ + + + S      L N Y   G  D AA+V
Sbjct: 428 LAACRMHKNAKVGQFAAD-HVFELDPDDS-GPPVLLYNIYASTGQWDAAARV 477


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/824 (32%), Positives = 427/824 (51%), Gaps = 99/824 (12%)

Query: 107  SGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK------ 158
            +G+A +    +  +L+D+Y ++  +ED +R FD+M E NV+SWTSL+SGYA++       
Sbjct: 267  TGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAH 326

Query: 159  ---------------------------MNDRVLELFHRMQVEGIKPNSFTFSTVL----- 186
                                       + +  + LF +M   G++PN F  ++++     
Sbjct: 327  ARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSR 386

Query: 187  -GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
             G +ADEG      QVH  V+K G      V  AL+  Y    +V +A+ +F+ M D + 
Sbjct: 387  SGYMADEGF-----QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNV 441

Query: 246  ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
            ++W S++ GY  +    E    +  M   G    ++TF +V   C   ++  L  Q+   
Sbjct: 442  VSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGH 501

Query: 306  VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
            +++ G +   ++   L+  +S    +E+A  +F  M E  D++SW AMIS +  +G    
Sbjct: 502  IIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC-DIISWNAMISAYAHHGLCRE 560

Query: 366  AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLN 421
            ++  F  M       N  T S +L+   +V   +    +H  ++K   + +  +   LL 
Sbjct: 561  SLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLT 620

Query: 422  AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
             Y + G  ++A  VF+ + E+D+++W++M+A Y Q G     +KI  +L   G KP+  T
Sbjct: 621  LYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMG-KPDRVT 679

Query: 482  FSSVIN---------------------------------ACTAPSAAVEQGKQFHACSIK 508
            ++++I                                  A TA  A +E+G+Q H   IK
Sbjct: 680  WNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIK 739

Query: 509  AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
                + L V++A + MY K G +    ++  +   R  +SWN +I  +A+HG  +KA E 
Sbjct: 740  LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARET 799

Query: 569  FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
            F EM +   + D +TF+ +++AC H GLVDEG  Y+D M  E  ++P +EH  C++DL  
Sbjct: 800  FHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLG 859

Query: 629  RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
            R+G L  A   I  MP   +   WR++LAACR              L+ L P D + YVL
Sbjct: 860  RSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVL 919

Query: 675  LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
             SN+ A +G W++   +RK M    +KK+   SW+++K+K +SF  G+  HPQ+++I +K
Sbjct: 920  YSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAK 979

Query: 735  LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
            L EL    K+AGY PDTS+ L D+D+E KE  L  HSERLA+AFGL+ TP  + L+I KN
Sbjct: 980  LGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKN 1039

Query: 795  LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            LRVCGDCH+V K +S +  R IV+RD  RFHHF  G CSCGDYW
Sbjct: 1040 LRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 156/560 (27%), Positives = 272/560 (48%), Gaps = 73/560 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD  P+R+ V +  ++  Y ++   ++A  LF                S ++ CG  
Sbjct: 85  RNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF----------------SDMRHCGVK 128

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +H                       +LVD + +   +ED   +F  M E +VVSW +++
Sbjct: 129 ANH-----------------------ALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMI 165

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GYA     D    +F  M   G+ P+ +T  +VL   A+ G +  A Q+H ++ + G  
Sbjct: 166 GGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYG 225

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V   LI+ Y K+  +R A+ +  GM  +D  +  +++ GY        A E    M
Sbjct: 226 SYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGY--------AHEGIYTM 277

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSK--C 328
           G A           +I + A + E+  A++   ++  KN I +     T L+  Y+K   
Sbjct: 278 GNA-----------LIDMYAKSGEIEDAKRAFDEMEEKNVISW-----TSLISGYAKHGY 321

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G M  A  +F  MR  ++  SW+ M+SG+++ G  + AV  FCQM   GV PNGF  + +
Sbjct: 322 GHMAHARYVFDEMRH-RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASL 380

Query: 389 LTAQP-----AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +TA       A   FQVH  ++KT       VGTAL++ Y   G++  A K+FE + + +
Sbjct: 381 ITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHN 440

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W++++ GY+  G+    + +Y+++  EGV  N+ TF++V ++C      V  G Q  
Sbjct: 441 VVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQV-LGYQVL 499

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
              I+    +++ V+++L++M+S   ++E A  VF    + D++SWN+MI  YA HG  +
Sbjct: 500 GHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCR 559

Query: 564 KALEVFKEMRRQDLEFDGIT 583
           ++L  F  MR    E +  T
Sbjct: 560 ESLRCFHWMRHLHNETNSTT 579



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 168/596 (28%), Positives = 284/596 (47%), Gaps = 64/596 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GC 90
           +FD    RN   ++ +L  Y R  L++EA+ LF  +  LG+   G  ++S++  C   G 
Sbjct: 330 VFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGY 389

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           + D  F  QVH   VK+G   DV V T+LV  Y     V + +++F++M + NVVSWTSL
Sbjct: 390 MADEGF--QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSL 447

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV---LGVLADEGIVATAVQVHTMVIK 207
           + GY+ +     VL ++ RM+ EG+  N  TF+TV    G+L D+       QV   +I+
Sbjct: 448 MVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ---VLGYQVLGHIIQ 504

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G E   SV N+LISM+     V +A  VFD M + D I+WN+M++ Y  + L  E+   
Sbjct: 505 YGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRC 564

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F+ M     E   +T  S++ +C++   L+  R +H  V+K G+D +  I   L+  YS+
Sbjct: 565 FHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSE 624

Query: 328 CGKMEDASKIFSMMRE---------------------------------MKDVVSWTAMI 354
            G+ EDA  +F  M E                                   D V+W A+I
Sbjct: 625 AGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALI 684

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTY-SIILTAQPAV--SPFQVHAHIIKTNYEK 411
            GH +N   + AV  +  +  +G+  N  T  S+  TA  AV     Q+H  +IK  +E 
Sbjct: 685 GGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFES 744

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              V  A ++ Y K G + +  K+      +  ++W+ +++ +A+ G  + A + + ++ 
Sbjct: 745 DLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEML 804

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYS 526
             G KP+  TF S+++AC      V++G  ++        +   + + +C+    + +  
Sbjct: 805 KLGPKPDHVTFVSLLSACN-HGGLVDEGLAYYDSMTREFGVFPGIEHCVCI----IDLLG 859

Query: 527 KKGNIESASEVFKRQ--RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           + G +  A    K       DL +W S++     HG+    LE+ ++     LE D
Sbjct: 860 RSGRLSHAEGFIKEMPVPPNDL-AWRSLLAACRIHGN----LELARKTAEHLLELD 910



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 193/393 (49%), Gaps = 34/393 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF+  P  N V +  L+  Y       E LN++  +R+ G+    +T ++V  +CG L
Sbjct: 430 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 489

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V G QV    ++ GF   V+V+ SL+ ++   ++VE+   VFD MNE +++SW +++
Sbjct: 490 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 549

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S YA + +    L  FH M+    + NS T S++L V +    +     +H +V+K G +
Sbjct: 550 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 609

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE----- 266
               +CN L+++Y ++    DA  VF  M +RD I+WNSM+A YV +   ++  +     
Sbjct: 610 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 669

Query: 267 ---------TFN------------NMGLAGAELTR-----STFVSVIKLCATTK--ELRL 298
                    T+N            N  +   +L R     + +++++ L AT     L  
Sbjct: 670 LQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATANLAVLEE 729

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +QLH  V+K G + D ++    M  Y KCG+M D  K+       +  +SW  +IS   
Sbjct: 730 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPIN-RSRLSWNILISAFA 788

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           ++G    A   F +M + G +P+  T+  +L+A
Sbjct: 789 RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSA 821



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 183/448 (40%), Gaps = 119/448 (26%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L  S ++ +++LC   K  +    +H+ ++ NG   D ++ T L++ Y K G +  A  +
Sbjct: 28  LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 87

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M E + VVSWTAM+SG+ QNG  + A   F  M   GV+ N                
Sbjct: 88  FDGMPE-RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN---------------- 130

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
                               AL++ + K G +++A+ +F  + E+D+V+W+AM+ GYA  
Sbjct: 131 -------------------HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQ 171

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI---------- 507
           G  + +  ++R +   G+ P+ +T  SV+ A +A    +    Q H              
Sbjct: 172 GFADDSFCMFRSMLRGGLVPDCYTLGSVLRA-SAEGGGLIIANQIHGIITQLGYGSYDIV 230

Query: 508 ---------------------KAKLNNALCVSSALVT----------------MYSKKGN 530
                                K  L   L  S+AL+T                MY+K G 
Sbjct: 231 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGE 290

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQH--GHTKKALEVFKEMRRQD------------ 576
           IE A   F    +++++SW S+I GYA+H  GH   A  VF EMR ++            
Sbjct: 291 IEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYV 350

Query: 577 -------------------LEFDGITFIGVITACTHAG-LVDEGQQYFDIMVNEHHIYPT 616
                              +E +G     +ITAC+ +G + DEG Q    +V    I   
Sbjct: 351 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT-GILGD 409

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           +   + +V  Y   G++  A  +   MP
Sbjct: 410 VYVGTALVHFYGSIGLVYNAQKLFEEMP 437



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           + L+S   + +   +  ++  C    A  +QG   H   I     + L +++ L+  Y K
Sbjct: 19  KLLSSNPTRLDPSLYLKILQLCIDKKAK-KQGHLIHTHLITNGFGSDLHLNTKLIIFYVK 77

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            G++ +A  VF    +R +VSW +M+ GY+Q+G  +KA  +F +MR
Sbjct: 78  VGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMR 123


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/829 (32%), Positives = 451/829 (54%), Gaps = 37/829 (4%)

Query: 36  DRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV 95
           DRSP      +N  + EY R+  H  AL +F  +   G+     +  ++L     L D  
Sbjct: 3   DRSP----FSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLS 58

Query: 96  FGRQVH-CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            G   H   C  SG   DV V+T+++ +Y R  +V   RR FD M   NVVSW+++++ Y
Sbjct: 59  QGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAY 118

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--GEV 212
           A+       LELF RM  EG+K N+ TF +VL   A    +A    +H  ++ +G  G+ 
Sbjct: 119 AQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDD 178

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
           V  + N +++MY K   V  AR VF+ ME ++++TWN+M+A    ++ + EAF     M 
Sbjct: 179 VI-LGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMD 237

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           L G    + T VSVI  CA  + +   R +H  V   G++ D+ +   L+  Y KCGK+ 
Sbjct: 238 LDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLR 297

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A      + E +D +SWT +++ + ++G    A+    +M  EGV+ + FT+  +L + 
Sbjct: 298 AARHALEGI-ETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESC 356

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKDIVAW 447
            A++      ++H  + ++  E    + TAL++ Y K G  D A + F+ + D +D+  W
Sbjct: 357 VAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVW 416

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +A+LA Y      +  + I+ +++ +GV P+  TF S+++AC A  AA+  G+  H+  +
Sbjct: 417 NALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDAC-ASLAALGLGRLTHSRML 475

Query: 508 KAKLNNALCVSSA------LVTMYSKKGNIESASEVF---KRQRKRDLVSWNSMICGYAQ 558
           +  L +   V+SA      ++ MY+K G++  A   F   +R R  D+V+W++M+  Y+Q
Sbjct: 476 ERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQ 535

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
            G +++AL  F  M+++ ++ D ++F+  I  C+H+GLV E   +F  + ++H I PT  
Sbjct: 536 FGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEA 595

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------------LISLQP 666
           H++C+VDL SRAG + +A  ++ R P  A  + W T+L+ACR                  
Sbjct: 596 HFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASL 655

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH- 725
              + Y LL++++  +  W +    R+ + +R    + G SWIE+ N+ Y F AGD    
Sbjct: 656 RSGSAYSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLL 715

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+  +I+++LE L   ++ AGY+ D    + D  ++ K+ +LS HSE++A+ FGL++TP 
Sbjct: 716 PREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPE 775

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           G PL+IVKN+ VC DCH VIK IS++  R I +RD   FH F  G CSC
Sbjct: 776 GTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSC 824



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 266/542 (49%), Gaps = 32/542 (5%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M + +  SW   ++ YARN  + R LE+F  M +EG+ P+  +   +L   A  G ++  
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 199 VQVHTMVIKN---GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
              H  V +    G +VV  V  A+++MY +   V  AR  FD M  R+ ++W++M+A Y
Sbjct: 61  EFFHRTVCEASGLGSDVV--VATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAY 118

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                  +A E F  M   G +    TFVSV+  CA+ + + L + +H +++ +G+  D 
Sbjct: 119 AQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDD 178

Query: 316 NIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
            I    +V  Y KCG+++ A ++F  M E K+ V+W  MI+   ++     A     +M 
Sbjct: 179 VILGNTIVNMYGKCGEVDLAREVFERM-EAKNAVTWNTMIAACSRHDRYKEAFALLGEMD 237

Query: 375 REGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
            +G+RPN  T   ++ A    Q  V    VH  +     E   +V  AL+N Y K G L 
Sbjct: 238 LDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLR 297

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            A    E I+ +D ++W+ +LA YA+ G  + A+ + +++  EGVK + FTF +++ +C 
Sbjct: 298 AARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCV 357

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK-RDLVSW 549
           A  AA+  G++ H    ++ +     + +ALV MY K GN ++A   F R    RD+  W
Sbjct: 358 AI-AALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVW 416

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC-----------THAGLVD 598
           N+++  Y      K+ L +F  M  Q +  D +TF+ ++ AC           TH+ +++
Sbjct: 417 NALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLE 476

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML--EKAMDIINRMPFAASATVWRTVL 656
            G      + +   +       + ++++Y++ G L   KA     R   A+    W  ++
Sbjct: 477 RG------LFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMV 530

Query: 657 AA 658
           AA
Sbjct: 531 AA 532



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 249/520 (47%), Gaps = 14/520 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD    RN V ++ ++  Y +     +AL LF+ +   G+     T  SVL  C  +   
Sbjct: 100 FDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAI 159

Query: 95  VFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             G+ +H   V  G    DV +  ++V++Y +   V+  R VF+ M   N V+W ++++ 
Sbjct: 160 ALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAA 219

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            +R+        L   M ++G++PN  T  +V+   A    +     VH +V   G E  
Sbjct: 220 CSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESD 279

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +V NAL+++Y K   +R AR   +G+E RD I+W +++A Y  +     A      M  
Sbjct: 280 NTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDH 339

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +L   TFV++++ C     L L  ++H ++ ++GI+ D  ++T L+  Y KCG  + 
Sbjct: 340 EGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDA 399

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A + F  M +++DV  W A+++ ++        +  F +M+ +GV P+  T+  IL A  
Sbjct: 400 ARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACA 459

Query: 394 AVSPFQV----HAHIIKTNYEKSFSVG------TALLNAYVKKGILDEAAKVF---ELID 440
           +++   +    H+ +++       +V       T+++N Y K G L +A   F       
Sbjct: 460 SLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRAR 519

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D+VAWSAM+A Y+Q G +E A++ +  +  EGVKP+  +F S I  C+      E   
Sbjct: 520 ASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVA 579

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
            F +      +       + LV + S+ G I  A  + +R
Sbjct: 580 FFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRR 619



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 182/364 (50%), Gaps = 11/364 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+R   +N V +N ++    R   ++EA  L   +   GL     TL SV+  C  +
Sbjct: 199 REVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWM 258

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              V GR VH      G   D  V+ +LV+LY +   +   R   + +   + +SWT+LL
Sbjct: 259 QSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLL 318

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + YAR+    R + +  RM  EG+K +SFTF  +L        +A   ++H  + ++G E
Sbjct: 319 AAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIE 378

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNN 270
           +   +  AL+ MY K      AR  FD M D RD   WN+++A YV  +   E    F  
Sbjct: 379 LDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFAR 438

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-------IRTGLMV 323
           M L G      TF+S++  CA+   L L R  HS++L+ G+ FD         + T ++ 
Sbjct: 439 MSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL-FDRQAVASADLLTTSVIN 497

Query: 324 AYSKCGKMEDASKIFSMMREMK--DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
            Y+KCG + DA   F+  R  +  DVV+W+AM++ + Q G  + A+  F  M +EGV+P+
Sbjct: 498 MYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPD 557

Query: 382 GFTY 385
             ++
Sbjct: 558 SVSF 561


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/743 (35%), Positives = 423/743 (56%), Gaps = 23/743 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLF 92
           +FD+ P +N + ++ ++  Y +    +EAL +F+ + R+ G       L+SV++ C  L 
Sbjct: 84  VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 143

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G Q+H   V+SGF +DV V TSL+D Y +  N+E+ R VFD ++E   V+WT++++
Sbjct: 144 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 203

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY +   +   LELF +M+   + P+ +  S+VL   +    +    Q+H  V++ G E+
Sbjct: 204 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 263

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             SV N LI  Y K   V+  R +FD M  ++ I+W +M++GY+ N    EA + F  M 
Sbjct: 264 DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN 323

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G +       SV+  C + + L   RQ+H+  +K  ++ D  ++ GL+  Y+K   + 
Sbjct: 324 RLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLI 383

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA K+F +M E ++V+S+ AMI G+     +  A+  F +M      P+  T+  +L   
Sbjct: 384 DAKKVFDVMAE-QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVS 442

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            ++       Q+H  IIK         G+AL++ Y K   + +A  VFE ++EKDIV W+
Sbjct: 443 ASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWN 502

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM  GY Q  + E A+K+Y  L     KPNEFTF+++I A +   A++  G+QFH   +K
Sbjct: 503 AMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNL-ASLRHGQQFHNQLVK 561

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L+    V++ALV MY+K G+IE A ++F     RD+V WNSMI  +AQHG  ++AL +
Sbjct: 562 MGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGM 621

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM ++ ++ + +TF+ V++AC+HAG V++G  +F+ M     I P  EHY+C+V L  
Sbjct: 622 FREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLG 680

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           R+G L +A + I +MP   +A VWR++L+ACR+              IS  P DS  Y+L
Sbjct: 681 RSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYIL 740

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN++A+ G W +  +VR  M+  +V KE G SWIEV NK   F+A D +H +++ I S 
Sbjct: 741 LSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSV 799

Query: 735 LEELSTRLKDAGYKPDTSYVLQD 757
           L+ L   +K AGY PD + +L +
Sbjct: 800 LDILIQHIKGAGYVPDATALLMN 822



 Score =  285 bits (730), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 164/570 (28%), Positives = 312/570 (54%), Gaps = 17/570 (2%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H + + SG   D  ++  L+++  +++ V++ R VFD M   N+++W+S++S Y++   
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 108

Query: 160 NDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           ++  L +F  +Q + G  PN F  ++V+      G+V    Q+H  V+++G +    V  
Sbjct: 109 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 168

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +LI  Y K+  + +AR VFD + ++ ++TW +++AGY        + E F  M       
Sbjct: 169 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 228

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            R    SV+  C+  + L   +Q+H+ VL+ G + D ++   L+  Y+KC +++   K+F
Sbjct: 229 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 288

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M  +K+++SWT MISG++QN     A+  F +M R G +P+GF  + +LT+  +    
Sbjct: 289 DQMV-VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREAL 347

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               QVHA+ IK N E    V   L++ Y K  +L +A KVF+++ E+++++++AM+ GY
Sbjct: 348 EQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGY 407

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +       A++++ ++      P+  TF S++   +A   A+E  KQ H   IK  ++  
Sbjct: 408 SSQEKLSEALELFHEMRVRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKFGVSLD 466

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L   SAL+ +YSK   ++ A  VF+   ++D+V WN+M  GY QH   ++AL+++  ++ 
Sbjct: 467 LFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQF 526

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY-PTMEHYSCMVDLYSRAGML 633
              + +  TF  +ITA ++   +  GQQ+ + +V     + P + +   +VD+Y++ G +
Sbjct: 527 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSI 584

Query: 634 EKAMDIINRMPFAASATVWRTVLAACRLIS 663
           E+A  + N       +++WR V+    +IS
Sbjct: 585 EEARKMFN-------SSIWRDVVCWNSMIS 607



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 166/542 (30%), Positives = 287/542 (52%), Gaps = 20/542 (3%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK     + + +FD+  ++  V +  ++  Y +      +L LF  +R   +      
Sbjct: 173 FYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYV 232

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           +SSVL  C  L     G+Q+H   ++ G   DV+V   L+D Y + N V+ GR++FD M 
Sbjct: 233 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 292

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             N++SWT+++SGY +N  +   ++LF  M   G KP+ F  ++VL        +    Q
Sbjct: 293 VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 352

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH   IK   E    V N LI MY KS ++ DA+ VFD M +++ I++N+M+ GY + E 
Sbjct: 353 VHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEK 412

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA E F+ M +     +  TFVS++ + A+   L L++Q+H  ++K G+  D    + 
Sbjct: 413 LSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSA 472

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  YSKC  ++DA  +F  M E KD+V W AM  G+ Q+   + A+  +  +     +P
Sbjct: 473 LIDVYSKCSYVKDARHVFEEMNE-KDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKP 531

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N FT++ ++TA   ++      Q H  ++K   +    V  AL++ Y K G ++EA K+F
Sbjct: 532 NEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF 591

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
                +D+V W++M++ +AQ G+ E A+ ++R++  EG++PN  TF +V++AC+  +  V
Sbjct: 592 NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSH-AGRV 650

Query: 497 EQG-KQFHAC---SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNS 551
           E G   F++     IK    +  CV    V++  + G +  A E  ++   +   + W S
Sbjct: 651 EDGLNHFNSMPGFGIKPGTEHYACV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 706

Query: 552 MI 553
           ++
Sbjct: 707 LL 708



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 248/479 (51%), Gaps = 8/479 (1%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           +Q+  ++P    F+ +L +      +     +H  +I +G +  T + N LI++  KS  
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL-AGAELTRSTFVSVIK 288
           V +AR VFD M  ++ ITW+SMV+ Y       EA   F ++   +G         SVI+
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C     +    QLH  V+++G D D  + T L+  YSK G +E+A  +F  + E K  V
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE-KTAV 196

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           +WT +I+G+ + G   +++  F QM    V P+ +  S +L+A   +       Q+HA++
Sbjct: 197 TWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 256

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           ++   E   SV   L++ Y K   +    K+F+ +  K+I++W+ M++GY Q      A+
Sbjct: 257 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAM 316

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           K++ ++   G KP+ F  +SV+ +C     A+EQG+Q HA +IKA L +   V + L+ M
Sbjct: 317 KLFGEMNRLGWKPDGFACTSVLTSC-GSREALEQGRQVHAYTIKANLESDEFVKNGLIDM 375

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K   +  A +VF    +++++S+N+MI GY+      +ALE+F EMR +      +TF
Sbjct: 376 YAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTF 435

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           + ++        ++  +Q   +++ +  +   +   S ++D+YS+   ++ A  +   M
Sbjct: 436 VSLLGVSASLFALELSKQIHGLII-KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM 493


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 279/839 (33%), Positives = 433/839 (51%), Gaps = 100/839 (11%)

Query: 24  SPFYSKKDQSLFDRSPQRNF----VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           SP +S         +P R       +YN  +  +C+    + A+ L    ++  L     
Sbjct: 43  SPIFSSCIPIRISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELET--K 100

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T  SVL+ C  L     G++VH     +    D  +   LV  Y    ++++GRRVFD M
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATA 198
            + NV  W  ++S YA                    K   F  S  L  ++ ++GI    
Sbjct: 161 EKKNVYLWNFMVSEYA--------------------KIGDFKESICLFKIMVEKGI---- 196

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
                                      + K    A  +FD + DRD I+WNSM++GYV+N
Sbjct: 197 ---------------------------EGKRPESAFELFDKLCDRDVISWNSMISGYVSN 229

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            L       +  M   G ++  +T +SV+  CA +  L L + +HS  +K+  +   N  
Sbjct: 230 GLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFS 289

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  YSKCG ++ A ++F  M E ++VVSWT+MI+G+ ++G  D A+    QM +EGV
Sbjct: 290 NTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGV 348

Query: 379 RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           + +    + IL A            VH +I   N E +  V  AL++ Y K G ++ A  
Sbjct: 349 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANS 408

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VF  +  KDI++W+ M      IG+               +KP+  T + V+ AC + SA
Sbjct: 409 VFSTMVVKDIISWNTM------IGE---------------LKPDSRTMACVLPACASLSA 447

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +E+GK+ H   ++   ++   V++ALV +Y K G +  A  +F     +DLVSW  MI 
Sbjct: 448 -LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIA 506

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY  HG+  +A+  F EMR   +E D ++FI ++ AC+H+GL+++G ++F IM N+ +I 
Sbjct: 507 GYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIE 566

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------R 660
           P +EHY+CMVDL SR G L KA + +  +P A  AT+W  +L  C              R
Sbjct: 567 PKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAER 626

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           +  L+P ++  YVLL+N+YA    W+E  R+R+ +  + ++K  G SWIE+K K   F++
Sbjct: 627 VFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVS 686

Query: 721 G-DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
           G + SHP S  I S L+++  ++K+ G+ P T Y L + D+  KE  L  HSE+LA+AFG
Sbjct: 687 GNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFG 746

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+  P    +++ KNLRVCGDCH + K +SK  RR+IV+RD+NRFHHFK+G CSC  +W
Sbjct: 747 LLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/750 (34%), Positives = 424/750 (56%), Gaps = 32/750 (4%)

Query: 118 SLVDLYMR--TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELF-HRMQVEG 174
           +L+  Y R    +    RR+ D+M   N VS+  L+  Y+R    +  LE F H  +   
Sbjct: 50  TLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAE 109

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           +K + FT++  L   +  G +     VH + +  G      V N+L+SMY +   + +AR
Sbjct: 110 VKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEAR 169

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            VFD  E+RD ++WNS+V+GY+    H E    F  M      L      SVIK C+   
Sbjct: 170 RVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGD 229

Query: 295 -ELR-LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             +R +A  +H  V+K G+D D  + + ++  Y+K G + +A  +F  + +  +VV + A
Sbjct: 230 GSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLD-PNVVVFNA 288

Query: 353 MISGHLQNGA------IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHA 402
           MI+G  ++ A      +  A++ + ++   G+ P  FT+S ++ A           Q+H 
Sbjct: 289 MIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHG 348

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
            ++K  ++    +G+AL++ Y     +++  + F  + ++D+V W+AM++G  Q    E 
Sbjct: 349 QVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFER 408

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ ++ +L   G+KP+ FT SSV+NAC A  A V  G+Q    + K+  +    + ++ +
Sbjct: 409 ALALFHELLGVGLKPDPFTISSVMNAC-ASLAVVRTGEQMQCFATKSGFDRFTAMGNSCI 467

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY++ GN+E+A + F+     D+VSW+++I  +AQHG  ++AL+ F EM    +  + I
Sbjct: 468 HMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEI 527

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           TF+GV+TAC+H GLVDEG +Y++IM  E+ + PT++H +C+VDL  RAG L  A   I  
Sbjct: 528 TFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRD 587

Query: 643 MPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQER 688
             F     VW+++L +C              R++ LQP  S  YV L NMY   G     
Sbjct: 588 SIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLG 647

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
           +++R LM +R VKKE G SWIE+++  +SF+AGD SHP+ N IY+KL E+ +++ D    
Sbjct: 648 SKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKI-DKLTT 706

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
            DTS +        ++  ++ HSE+LA+A G++  P  AP++++KNLRVC DCH+ +KLI
Sbjct: 707 TDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRDCHSTMKLI 766

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           SK E R+I++RD  RFHHF++G CSCGDYW
Sbjct: 767 SKSECREIILRDVIRFHHFRDGSCSCGDYW 796



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 277/545 (50%), Gaps = 25/545 (4%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLK 86
           + + + L D  P+RN V +N L+  Y R    +E+L  FL   R   +     T ++ L 
Sbjct: 63  THQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALA 122

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        G+ VH   V  G A  V VS SLV +Y R  ++ + RRVFD   E + VS
Sbjct: 123 ACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVS 182

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA--DEGIVATAVQVHTM 204
           W SL+SGY R   ++ +L +F  M+   +  NSF   +V+   +  D  +   A  VH  
Sbjct: 183 WNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGC 242

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY------VTN 258
           V+K G +    + +A++ MY K   + +A A+F  + D + + +N+M+AG       V  
Sbjct: 243 VVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHK 302

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           E+  EA   ++ +   G E T  TF SVI+ C    ++   +Q+H QVLK+    D  I 
Sbjct: 303 EVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIG 362

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           + L+  Y     MED  + F  + + +DVV+WTAMISG +QN   + A+  F ++   G+
Sbjct: 363 SALIDLYFNSACMEDGFRCFRSVPK-QDVVTWTAMISGCVQNELFERALALFHELLGVGL 421

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           +P+ FT S ++ A  +++      Q+     K+ +++  ++G + ++ Y + G ++ A +
Sbjct: 422 KPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQ 481

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
            F+ ++  D+V+WSA+++ +AQ G    A++ + ++    V PNE TF  V+ AC+    
Sbjct: 482 RFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACS-HGG 540

Query: 495 AVEQGKQFHACSIKAKLNNALCVS----SALVTMYSKKGNIESASEVFKRQR--KRDLVS 548
            V++G +++      K+   LC +    + +V +  + G +  A E F R      + V 
Sbjct: 541 LVDEGLRYYEI---MKMEYGLCPTVKHCTCVVDLLGRAGRLADA-EAFIRDSIFHDEPVV 596

Query: 549 WNSMI 553
           W S++
Sbjct: 597 WQSLL 601



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 2/221 (0%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F   P+++ V +  ++    ++ L + AL LF  +  +GL     T+SSV+  C  L   
Sbjct: 382 FRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVV 441

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G Q+ C   KSGF R   +  S + +Y R+ NVE   + F +M   +VVSW++++S +
Sbjct: 442 RTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSH 501

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGGEVV 213
           A++    + L+ F+ M    + PN  TF  VL   +  G+V   ++ +  M ++ G    
Sbjct: 502 AQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPT 561

Query: 214 TSVCNALISMYLKSKMVRDARA-VFDGMEDRDSITWNSMVA 253
              C  ++ +  ++  + DA A + D +   + + W S++ 
Sbjct: 562 VKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLG 602


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/739 (34%), Positives = 410/739 (55%), Gaps = 21/739 (2%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           ++  +++   +   R +FD M E   VSWT L+ GY ++  +     L+  M+  GI+P+
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
             T  T+L    +       VQ+HT VIK G E    VCN+L+  Y K+  +  A  +F 
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M ++D++T+NS++ GY    L+ EA E F  +  +G + +  TF +++       + + 
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +Q+H  VLK    ++  +   L+  YSK  ++++  K+F  M E+ D +S+  +I+ + 
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPEL-DGISYNVVITSYA 318

Query: 359 QNGAIDLAVNFF--CQMTREGVR--PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
            NG    + + F   Q TR   R  P     SI  ++       Q+H   I         
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V  AL++ Y K     EA K+F+ I  K  V W+AM++ Y Q G  E  + ++  +   G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           V  ++ TF+S++ AC A  A++  G+Q H+  I++   + +   SAL+  Y+K G +  A
Sbjct: 439 VPADQATFASILRAC-ANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            + F    +R+ VSWN++I  YAQ+G+    L  F++M +   + D ++F+ V++AC+H 
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           G V+E   +F+ M   + + P  EHY+ MVD+  R G  ++A  ++  MPF  S  +W +
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617

Query: 655 VLAACR--------------LISLQP-HDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           VL +CR              L +++   D+A Y+ +SN+YA  G W   A+V+K M DR 
Sbjct: 618 VLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           V+K   YSW+E+K++T+ F A D SHP+  +I  K+  LS  ++  GYKPDT+  L D+D
Sbjct: 678 VRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVD 737

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           +  K   L  HSER AIAF L+ TP G+P+ ++KNLR C DCH  IK+IS++  R+I+VR
Sbjct: 738 EVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVR 797

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D++RFHHFK+G+CSCGDYW
Sbjct: 798 DSSRFHHFKDGVCSCGDYW 816



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 244/465 (52%), Gaps = 5/465 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + LFD   +R  V +  L+  Y + +  +EA  L+  +RR G+     TL ++L   G
Sbjct: 92  KARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFG 151

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L       Q+H   +K G+  ++ V  SLVD Y +T+ +    ++F  M   + V++ S
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L++GY+   +N+  +ELF  +   GIKP+ FTF+ +L             QVH  V+K  
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V NAL+  Y K   V +   +F  M + D I++N ++  Y  N    E+F+ F 
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFR 331

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +     +  +  F +++ +  ++  LR+ RQ+H Q +  G +F+  +   L+  Y+KC 
Sbjct: 332 KLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCN 391

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
             ++A KIF  +   K  V WTAMIS ++Q G  +  +N F  M R GV  +  T++ IL
Sbjct: 392 GDKEAQKIFDNI-ACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   ++      Q+H+ +I++ +  +   G+ALL+ Y K G + +A K F  + E++ V
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSV 510

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           +W+A+++ YAQ G+ +G +  ++Q+   G KP+  +F SV++AC+
Sbjct: 511 SWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 223/428 (52%), Gaps = 15/428 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF     ++ V +N L+  Y  + L++EA+ LFL +   G+     T +++L     L D
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG+QVH   +K+ F  +V V  +L+D Y + + V++  ++F +M E + +S+  +++ 
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITS 316

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA N       +LF ++Q        F F+T+L +      +    Q+H   I  G    
Sbjct: 317 YAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFE 376

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           + V NAL+ MY K    ++A+ +FD +  + ++ W +M++ YV    H E    F++M  
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRR 436

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKM 331
            G    ++TF S+++ CA    + L RQLHS ++++G  F  N+ +G  L+  Y+KCG M
Sbjct: 437 TGVPADQATFASILRACANLASISLGRQLHSLLIRSG--FMSNVYSGSALLDTYAKCGCM 494

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA K F  M E ++ VSW A+IS + QNG +D  +N F QM + G +P+  ++  +L+A
Sbjct: 495 TDAIKSFGEMPE-RNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSA 553

Query: 392 -------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKD 443
                  + A+  F     I +   ++     T++++   + G  DEA K+  E+  E  
Sbjct: 554 CSHCGFVEEALWHFNSMTQIYEVTPKREHY--TSMVDVLCRNGRFDEAEKLMTEMPFEPS 611

Query: 444 IVAWSAML 451
            + WS++L
Sbjct: 612 EIMWSSVL 619



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 246/490 (50%), Gaps = 14/490 (2%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
           G  PN+   +  +    + G +  A QV   M  KN     T   N +IS +LK   +  
Sbjct: 38  GFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKN-----TISLNMMISGHLKFGKLSK 92

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR +FDGM +R +++W  ++ GY+ +    EAF  + +M   G E    T V+++     
Sbjct: 93  ARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGE 152

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
            +   +  Q+H+ V+K G +++  +   L+ AY K   +  AS++F  M   KD V++ +
Sbjct: 153 LETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNS 211

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
           +++G+   G  + A+  F ++   G++P+ FT++ +L+A   +       QVH  ++KTN
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +  +  VG ALL+ Y K   +DE  K+F  + E D ++++ ++  YA  G  + +  ++R
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFR 331

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           +L        +F F+++++  T+ S  +  G+Q H  +I    N    V +ALV MY+K 
Sbjct: 332 KLQFTRFDRRQFPFATLLSIATS-SLNLRMGRQIHCQAITVGANFESRVENALVDMYAKC 390

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
              + A ++F     +  V W +MI  Y Q G  ++ + VF +MRR  +  D  TF  ++
Sbjct: 391 NGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC +   +  G+Q   +++    +   +   S ++D Y++ G +  A+     MP   S
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFM-SNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNS 509

Query: 649 ATVWRTVLAA 658
            + W  +++A
Sbjct: 510 VS-WNALISA 518



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ Q +FD    ++ V +  ++  Y +   H+E +N+F  +RR G+P   +T +S+L+ C
Sbjct: 394 KEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRAC 453

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     GRQ+H   ++SGF  +V   ++L+D Y +   + D  + F +M E N VSW 
Sbjct: 454 ANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWN 513

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +L+S YA+N   D  L  F +M   G KP+S +F +VL   +  G V  A+
Sbjct: 514 ALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 131/298 (43%), Gaps = 44/298 (14%)

Query: 386 SIILTAQPAVSP-----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF---- 436
           +++L   PA  P       + AHI+KT +  +       +N ++++G L  A +VF    
Sbjct: 11  NLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMP 70

Query: 437 ------------------------ELID---EKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                                   EL D   E+  V+W+ ++ GY Q   ++ A ++Y  
Sbjct: 71  AKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYAD 130

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGK---QFHACSIKAKLNNALCVSSALVTMYS 526
           +   G++P+  T  ++++        +E      Q H   IK      L V ++LV  Y 
Sbjct: 131 MRRGGIEPDYVTLVTLLSGF----GELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYC 186

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K   +  AS++FK    +D V++NS++ GY+  G  ++A+E+F E+    ++    TF  
Sbjct: 187 KTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAA 246

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           +++A         GQQ    ++  + ++      + ++D YS+   +++   +   MP
Sbjct: 247 LLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG-NALLDYYSKHDQVDEVGKLFXEMP 303


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 268/794 (33%), Positives = 412/794 (51%), Gaps = 70/794 (8%)

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVSWTSLLSGYARNKMNDRVLELFHRM 170
           +N+++ L+  Y+    +     +      S+  V  W SL+  Y  N   ++ L LF  M
Sbjct: 59  LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
                 P+++TF  V     +   V      H + +  G      V NAL++MY + + +
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL 178

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKL 289
            DAR VFD M   D ++WNS++  Y        A E F+ M    G      T V+V+  
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           CA+     L +QLH   + + +  +  +   L+  Y+KCG M++A+ +FS M  +KDVVS
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVVS 297

Query: 350 WTAMISGHLQNGAIDLAVNFF----------------------------------C-QMT 374
           W AM++G+ Q G  + AV  F                                  C QM 
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK-------TNYEKSFSVGTALLNAY 423
             G++PN  T   +L+   +V       ++H + IK         +     V   L++ Y
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417

Query: 424 VKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG--VKPNE 479
            K   +D A  +F+ +   E+D+V W+ M+ GY+Q GD   A+++  ++  E    +PN 
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA-LCVSSALVTMYSKKGNIESASEVF 538
           FT S  + AC A  AA+  GKQ HA +++ + N   L VS+ L+ MY+K G+I  A  VF
Sbjct: 478 FTISCALVAC-ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
                ++ V+W S++ GY  HG+ ++AL +F EMRR   + DG+T + V+ AC+H+G++D
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +G +YF+ M     + P  EHY+C+VDL  RAG L  A+ +I  MP      VW   L+ 
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656

Query: 659 CRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           CR+                L  +    Y LLSN+YA  G W++  R+R LM  + VKK  
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           G SW+E    T +F  GD +HP + +IY  L +   R+KD GY P+T + L D+DDE K+
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKD 776

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
            +L +HSE+LA+A+G++ TP GA ++I KNLRVCGDCHT    +S++   DI++RD++RF
Sbjct: 777 DLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRF 836

Query: 825 HHFKEGLCSCGDYW 838
           HHFK G CSC  YW
Sbjct: 837 HHFKNGSCSCKGYW 850



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 240/525 (45%), Gaps = 58/525 (11%)

Query: 33  SLFDRSPQRN--FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           SL  R P  +     +N L+  Y  +    + L LF  +  L       T   V K CG 
Sbjct: 80  SLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 139

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +     G   H   + +GF  +V V  +LV +Y R  ++ D R+VFD+M+  +VVSW S+
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199

Query: 151 LSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +  YA+       LE+F RM  E G +P++ T   VL   A  G  +   Q+H   + + 
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS- 258

Query: 210 GEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA-------------- 253
            E++ +  V N L+ MY K  M+ +A  VF  M  +D ++WN+MVA              
Sbjct: 259 -EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRL 317

Query: 254 ---------------------GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
                                GY    L  EA      M  +G +    T +SV+  CA+
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377

Query: 293 TKELRLARQLHSQVLKNGIDFDHN-------IRTGLMVAYSKCGKMEDASKIF-SMMREM 344
              L   +++H   +K  ID   N       +   L+  Y+KC K++ A  +F S+  + 
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTAQPAVSPF---- 398
           +DVV+WT MI G+ Q+G  + A+    +M  E    RPN FT S  L A  +++      
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497

Query: 399 QVHAHIIKTNYEK-SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           Q+HA+ ++         V   L++ Y K G + +A  VF+ +  K+ V W++++ GY   
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           G  E A+ I+ ++   G K +  T   V+ AC+  S  ++QG ++
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSH-SGMIDQGMEY 601



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 188/408 (46%), Gaps = 49/408 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGC 90
           + +FD     + V +N ++  Y +    + AL +F  +    G      TL +VL  C  
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR------TNNV--------------- 129
           L  H  G+Q+HC  V S   +++ V   LVD+Y +       N V               
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301

Query: 130 ----------EDGRRVFDDMNES----NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
                     ED  R+F+ M E     +VV+W++ +SGYA+  +    L +  +M   GI
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVI-------KNGGEVVTSVCNALISMYLKSK 228
           KPN  T  +VL   A  G +    ++H   I       KNG      V N LI MY K K
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421

Query: 229 MVRDARAVFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
            V  ARA+FD +  ++RD +TW  M+ GY  +    +A E  + M     +   + F   
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481

Query: 287 IKL--CATTKELRLARQLHSQVLKNGID-FDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
             L  CA+   LR+ +Q+H+  L+N  +     +   L+  Y+KCG + DA  +F  M  
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            K+ V+WT++++G+  +G  + A+  F +M R G + +G T  ++L A
Sbjct: 542 -KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 165/319 (51%), Gaps = 17/319 (5%)

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           I  C T  +++L   +H ++L  GI    N+ + L+  Y   G +  A    S++R    
Sbjct: 35  IHKCKTISQVKL---IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHA---VSLLRRFPP 87

Query: 347 ----VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
               V  W ++I  +  NG  +  +  F  M      P+ +T+  +  A   +S  +   
Sbjct: 88  SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147

Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
             HA  + T +  +  VG AL+  Y +   L +A KVF+ +   D+V+W++++  YA++G
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207

Query: 459 DTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
             + A++++ ++T+E G +P+  T  +V+  C A       GKQ H  ++ +++   + V
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPC-ASLGTHSLGKQLHCFAVTSEMIQNMFV 266

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            + LV MY+K G ++ A+ VF     +D+VSWN+M+ GY+Q G  + A+ +F++M+ + +
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326

Query: 578 EFDGITFIGVITACTHAGL 596
           + D +T+   I+     GL
Sbjct: 327 KMDVVTWSAAISGYAQRGL 345



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 160/351 (45%), Gaps = 35/351 (9%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           + + V ++  +  Y +  L  EAL +   +   G+     TL SVL  C  +   + G++
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386

Query: 100 VHCECVK-------SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN--ESNVVSWTSL 150
           +HC  +K       +G   +  V   L+D+Y +   V+  R +FD ++  E +VV+WT +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446

Query: 151 LSGYARNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           + GY+++   ++ LEL   M  E    +PN+FT S  L   A    +    Q+H   ++N
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506

Query: 209 GGEVVT-SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
               V   V N LI MY K   + DAR VFD M  ++ +TW S++ GY  +    EA   
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA--- 324
           F+ M   G +L   T + V+  C+           HS ++  G+++ + ++T   V+   
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACS-----------HSGMIDQGMEYFNRMKTVFGVSPGP 615

Query: 325 ---------YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                      + G++  A ++   M      V W A +S    +G ++L 
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 37/332 (11%)

Query: 386 SIILTAQPAVSPFQVHA----HIIKTNYEKSFSVGTALLN-------AYVKKGILDEAAK 434
           S+  T+ P ++P  +H       +K  ++K  S G   LN        Y+  G L  A  
Sbjct: 21  SLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVS 80

Query: 435 VFELIDEKD--IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
           +       D  +  W++++  Y   G     + ++  + S    P+ +TF  V  AC   
Sbjct: 81  LLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI 140

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           S+ V  G+  HA S+     + + V +ALV MYS+  ++  A +VF      D+VSWNS+
Sbjct: 141 SS-VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199

Query: 553 ICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           I  YA+ G  K ALE+F  M  +     D IT + V+  C   G    G+Q     V   
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAI 671
            I   M   +C+VD+Y++ GM+++A  + + M        W  ++A              
Sbjct: 260 MI-QNMFVGNCLVDMYAKCGMMDEANTVFSNMS-VKDVVSWNAMVAG------------- 304

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
                  Y+  G +++  R+ + M + K+K +
Sbjct: 305 -------YSQIGRFEDAVRLFEKMQEEKIKMD 329


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/658 (37%), Positives = 374/658 (56%), Gaps = 21/658 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H M+I+ G    T + N  +++Y K   +     +FD M  R+ ++W S++ G+  N 
Sbjct: 96  QLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNS 155

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA  +F  M + G   T+    SV++ C +   ++   Q+H  V+K G   +  + +
Sbjct: 156 RFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGS 215

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L   YSKCG++ DA K F  M   KD V WT+MI G ++NG    A+  + +M  + V 
Sbjct: 216 NLTDMYSKCGELSDACKAFEEM-PCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVF 274

Query: 380 PNGFTYSIILTAQPAV--SPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            +       L+A  A+  S F   +HA I+K  +E    +G AL + Y K G +  A+ V
Sbjct: 275 IDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNV 334

Query: 436 FEL-IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           F++  D   IV+ +A++ GY ++   E A+  +  L   G++PNEFTF+S+I AC A  A
Sbjct: 335 FQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKAC-ANQA 393

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +E G Q H   +K        VSS LV MY K G  + + ++F      D ++WN+++ 
Sbjct: 394 KLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVG 453

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            ++QHG  + A+E F  M  + L+ + +TF+ ++  C+HAG+V++G  YF  M   + + 
Sbjct: 454 VFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVV 513

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  EHYSC++DL  RAG L++A D IN MPF  +   W + L AC+              
Sbjct: 514 PKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADK 573

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L+ L+P +S  +VLLSN+YA    W++   +RK++ D  + K  GYSW++++NKT+ F  
Sbjct: 574 LMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGV 633

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
            D SHPQ  +IY KL+ L  ++K  GY P T  VL D+DD  KE +L  HSER+A+AF L
Sbjct: 634 EDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSL 693

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +  P G P+ + KNLRVC DCH+ +K ISK+  R+I+VRD +RFHHF  G CSCGDYW
Sbjct: 694 LTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 237/479 (49%), Gaps = 15/479 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H   ++ G   +  +S   ++LY +   ++   ++FD M++ N+VSWTS+++G+A 
Sbjct: 94  GKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAH 153

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      L  F +M++EG     F  S+VL      G +    QVH +V+K G      V
Sbjct: 154 NSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFV 213

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            + L  MY K   + DA   F+ M  +D++ W SM+ G+V N    +A   +  M     
Sbjct: 214 GSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDV 273

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            + +    S +  C+  K     + LH+ +LK G +++  I   L   YSK G M  AS 
Sbjct: 274 FIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASN 333

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F +  +   +VS TA+I G+++   I+ A++ F  + R G+ PN FT++ ++ A    +
Sbjct: 334 VFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQA 393

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q+H  ++K N+++   V + L++ Y K G+ D + ++F+ I+  D +AW+ ++ 
Sbjct: 394 KLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVG 453

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SI 507
            ++Q G    A++ +  +   G+KPN  TF +++  C+  +  VE G  + +       +
Sbjct: 454 VFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSH-AGMVEDGLNYFSSMEKIYGV 512

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
             K  +  CV    + +  + G ++ A +       + ++  W S +     HG  ++A
Sbjct: 513 VPKEEHYSCV----IDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERA 567



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 206/400 (51%), Gaps = 10/400 (2%)

Query: 264 AFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +F    N+  +G +L+ + T   +I+  A TKEL   +QLH+ +++ G   +  +    +
Sbjct: 58  SFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFL 117

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YSKCG+++   K+F  M + +++VSWT++I+G   N     A++ FCQM  EG     
Sbjct: 118 NLYSKCGELDYTIKLFDKMSQ-RNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQ 176

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           F  S +L A  ++       QVH  ++K  +     VG+ L + Y K G L +A K FE 
Sbjct: 177 FALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEE 236

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD V W++M+ G+ + GD + A+  Y ++ ++ V  ++    S ++AC+A  A+   
Sbjct: 237 MPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKAS-SF 295

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK-RDLVSWNSMICGYA 557
           GK  HA  +K        + +AL  MYSK G++ SAS VF+       +VS  ++I GY 
Sbjct: 296 GKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYV 355

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           +    +KAL  F ++RR+ +E +  TF  +I AC +   ++ G Q    +V  +      
Sbjct: 356 EMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPF 415

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
              S +VD+Y + G+ + ++ + + +        W T++ 
Sbjct: 416 VS-STLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVG 453



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 207/444 (46%), Gaps = 22/444 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+  QRN V +  ++  +  +S  QEAL+ F  +R  G       LSSVL+ C  L  
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG QVHC  VK GF  ++ V ++L D+Y +   + D  + F++M   + V WTS++ G
Sbjct: 192 IQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDG 251

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +N    + L  + +M  + +  +     + L   +     +    +H  ++K G E  
Sbjct: 252 FVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYE 311

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSI-TWNSMVAGYVTNELHMEAFETFNNMG 272
           T + NAL  MY KS  +  A  VF    D  SI +  +++ GYV  +   +A  TF ++ 
Sbjct: 312 TFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLR 371

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G E    TF S+IK CA   +L    QLH QV+K     D  + + L+  Y KCG  +
Sbjct: 372 RRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFD 431

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            + ++F  + E  D ++W  ++    Q+G    A+  F  M   G++PN  T+  +L   
Sbjct: 432 HSIQLFDEI-ENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGC 490

Query: 393 PAVSPFQVHAHIIKT--NY----EKSFSV------GTALLNAYVKKGILDEAAK-VFELI 439
                   HA +++   NY    EK + V       + +++   + G L EA   +  + 
Sbjct: 491 S-------HAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMP 543

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGA 463
            E ++  W + L      GD E A
Sbjct: 544 FEPNVFGWCSFLGACKIHGDMERA 567


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 281/821 (34%), Positives = 445/821 (54%), Gaps = 36/821 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P R+ V +  LL  + R+  H EAL LF  +   G      TLSS L++C  L +
Sbjct: 73  LFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGE 132

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG ++H   VK G   +  + T+LVDLY + +   +  ++   + + +VVSWT+++S 
Sbjct: 133 FEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISS 192

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEV 212
                     L+L+ +M   GI PN FTF  +LG+ +  G+     +V H+ +I  G E+
Sbjct: 193 LVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEM 252

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              +  A+I MY K + + DA  V       D   W S+++G+V N    EA     +M 
Sbjct: 253 NLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDME 312

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG-KM 331
           L+G      T+ S++   ++   L L  Q HS+V+  G++ D  +   L+  Y KC    
Sbjct: 313 LSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTT 372

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +  K F  +  + +V+SWT++I+G  ++G  + +V  F +M   GV+PN FT S IL A
Sbjct: 373 TNGVKAFRGI-ALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGA 431

Query: 392 ----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
               +  +   ++H +IIKT  +   +VG AL++AY   G+ DEA  V  +++ +DI+ +
Sbjct: 432 CSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITY 491

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + + A   Q GD E A+++   + ++ VK +EF+ +S I+A  A    +E GKQ H  S 
Sbjct: 492 TTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISA-AAGLGIMETGKQLHCYSF 550

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K+       VS++LV  YSK G++  A  VFK   + D VSWN +I G A +G    AL 
Sbjct: 551 KSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALS 610

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
            F +MR   ++ D +TF+ +I AC+   L+++G  YF  M   +HI P ++HY C+VDL 
Sbjct: 611 AFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLL 670

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
            R G LE+AM +I  MPF   + +++T+L AC              R + L P D AIY+
Sbjct: 671 GRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYL 730

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LL+++Y   G      + RKLM +R +++     W+EVK+K Y F A +     +++I  
Sbjct: 731 LLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLFSARE--KIGNDEINE 788

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           KLE L T +K+ GY        Q+ +D+        HSE+LA+AFG+++ P  AP++I K
Sbjct: 789 KLESLITEIKNRGYP------YQESEDK------LYHSEQLALAFGVLSVPTLAPIRINK 836

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           N  +C  CH+ I L+++   R+I+VRD  RFH FK+G CSC
Sbjct: 837 NSLICTHCHSFIMLLTQFVDREIIVRDRKRFHVFKDGQCSC 877



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 156/515 (30%), Positives = 263/515 (51%), Gaps = 14/515 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  VH   +K G   D+ +S +L+ LY +   V   R +FD+M   +VVSWT+LLS + R
Sbjct: 35  GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTR 94

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           NK +   L+LF  M   G  PN FT S+ L   +  G      ++H  V+K G E+   +
Sbjct: 95  NKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVL 154

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
              L+ +Y K     +   +   ++D D ++W +M++  V      EA + +  M  AG 
Sbjct: 155 GTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGI 214

Query: 277 ELTRSTFVSVIKLCATTKELRLARQ----LHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                TFV   KL      L L +     LHSQ++  G++ +  ++T ++  Y+KC +ME
Sbjct: 215 YPNEFTFV---KLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRME 271

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA K+ S      DV  WT++ISG +QN  +  AVN    M   G+ PN FTY+ +L A 
Sbjct: 272 DAIKV-SQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNAS 330

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAW 447
            +V       Q H+ +I    E    VG AL++ Y+K         K F  I   ++++W
Sbjct: 331 SSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISW 390

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++++AG+A+ G  E +V+++ ++ + GV+PN FT S+++ AC+   + + Q K+ H   I
Sbjct: 391 TSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSII-QTKKLHGYII 449

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K +++  + V +ALV  Y+  G  + A  V      RD++++ ++     Q G  + AL 
Sbjct: 450 KTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALR 509

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           V   M   +++ D  +    I+A    G+++ G+Q
Sbjct: 510 VITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQ 544



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 13/164 (7%)

Query: 472 SEGVKPNEF--TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           S    P  F  T   V++ C   S  +++G   H+  IK  L + L +S+ L+ +Y+K  
Sbjct: 8   SNSFSPCRFRETCLQVLSLCN--SQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCF 65

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
            +  A  +F     RD+VSW +++  + ++ H  +AL++F  M       +  T    + 
Sbjct: 66  GVGQARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALR 125

Query: 590 ACTHAGLVDEGQQYFDIMVN----EHHIYPTMEHYSCMVDLYSR 629
           +C+  G  + G +    +V      +H+  T      +VDLY++
Sbjct: 126 SCSALGEFEFGAKIHASVVKLGLELNHVLGTT-----LVDLYTK 164


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/731 (34%), Positives = 420/731 (57%), Gaps = 38/731 (5%)

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           +MR    +   R+F+ M   + +SW +++SG   N       +LF +M    +   +   
Sbjct: 59  HMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMI 118

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           S   G +    + A  +    M  +   +VV+   NA++S Y ++  V++A+ +FD M  
Sbjct: 119 S---GCVRYRNLRAARLLFDQMPER---DVVS--WNAMLSGYAQNGYVKEAKEIFDEMPC 170

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           ++SI+WN M+A YV N    +A   F          +++ +  +   C     ++  R +
Sbjct: 171 KNSISWNGMLAAYVQNGRIEDARRLFE---------SKADWELISWNCMMGGYVKRNRLV 221

Query: 303 HSQVLKNGIDFDHNIRTGLMVA-YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
            ++ + + +     +    M++ Y++ G++ +A ++F     ++DV +WTAM+SG++QNG
Sbjct: 222 DARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE-SPVRDVFTWTAMVSGYVQNG 280

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLN 421
            +D A   F  M  +    N  +++ I+              + +    ++ S    ++ 
Sbjct: 281 MLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMIT 336

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            Y + G + +A   F+ + ++D ++W+A++AGYAQ G  E A+ ++ ++  +G + N  T
Sbjct: 337 GYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRST 396

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
           F+S ++ C A  AA+E GKQ H   +KA L +   V +AL+ MY K GNI+ A  VF+  
Sbjct: 397 FTSTLSTC-AEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
            ++++VSWN+MI GYA+HG  K+AL +F+ M++  +  D +T +GV++AC+H GLVD+G 
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 515

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL 661
           +YF  M  ++ I    +HY+CM+DL  RAG L+ A +++  MPF   A  W  +L A R+
Sbjct: 516 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 575

Query: 662 --------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                           ++P +S +YVLLSN+YAA+G W +  R+R  M DR VKK  GYS
Sbjct: 576 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 635

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           W+EV+NK ++F  GD  HP+ ++IY+ LEEL  ++K  GY   T  VL D+++E K  +L
Sbjct: 636 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHML 695

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
             HSE+LA+AFG++A PAG P++++KNLRVC DCH  +K ISK+  R I++RD++RFHHF
Sbjct: 696 KYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHF 755

Query: 828 KEGLCSCGDYW 838
             G CSCGDYW
Sbjct: 756 NGGQCSCGDYW 766



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 158/606 (26%), Positives = 274/606 (45%), Gaps = 90/606 (14%)

Query: 13  PQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL 72
           P T+  PK+  S             +   + V++N  +  + R+     AL LF  + R 
Sbjct: 31  PSTRNQPKTTSSL------------ATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRR 78

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE 130
                 S++S      GCL +  F   RQ+     +    RD+     ++   +R  N+ 
Sbjct: 79  ------SSISWNAMISGCLSNDKFYLARQL----FEKMPTRDLVSWNVMISGCVRYRNLR 128

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
             R +FD M E +VVSW ++LSGYA+N       E+F  M  +    NS +++ +L    
Sbjct: 129 AARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYV 184

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
             G +  A ++     K   E+++  C  ++  Y+K   + DAR +FD M +RD ++WN+
Sbjct: 185 QNGRIEDARRLFES--KADWELISWNC--MMGGYVKRNRLVDARGIFDRMPERDEVSWNT 240

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           M++GY  N   +EA   F    +     T +  VS         E R  R       KN 
Sbjct: 241 MISGYAQNGELLEAQRLFEESPVRDV-FTWTAMVSGYVQNGMLDEAR--RVFDGMPEKNS 297

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF- 369
           + ++      ++  Y +C +M+ A ++F  M   ++V SW  MI+G+ QNG I  A NF 
Sbjct: 298 VSWN-----AIIAGYVQCKRMDQARELFEAM-PCQNVSSWNTMITGYAQNGDIAQARNFF 351

Query: 370 ------------------------------FCQMTREGVRPNGFTYSIILTAQPAVSPF- 398
                                         F +M R+G R N  T++  L+    ++   
Sbjct: 352 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 411

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              QVH  ++K   E    VG ALL  Y K G +D+A  VFE I+EK++V+W+ M+AGYA
Sbjct: 412 LGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYA 471

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HACSIKAK 510
           + G  + A+ ++  +   G+ P++ T   V++AC+  +  V++G ++         I A 
Sbjct: 472 RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSH-TGLVDKGTEYFYSMTQDYGITAN 530

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT---KKAL 566
             +  C    ++ +  + G ++ A  + K    + D  +W +++     HG+T   +KA 
Sbjct: 531 SKHYTC----MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 586

Query: 567 EVFKEM 572
           ++  EM
Sbjct: 587 KMIFEM 592



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 10/137 (7%)

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           +T + + G  +SA  +F    +R  +SWN+MI G   +     A ++F++M  +DL    
Sbjct: 56  ITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDL---- 111

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +++  +I+ C     +   +  FD M     +      ++ M+  Y++ G +++A +I +
Sbjct: 112 VSWNVMISGCVRYRNLRAARLLFDQMPERDVV-----SWNAMLSGYAQNGYVKEAKEIFD 166

Query: 642 RMPFAASATVWRTVLAA 658
            MP   S + W  +LAA
Sbjct: 167 EMPCKNSIS-WNGMLAA 182


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/579 (40%), Positives = 364/579 (62%), Gaps = 25/579 (4%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKMEDASKI 337
           R  + +++K C   K L   R +H+ +L++   F H+I  G  L+  Y+KCG +E+A K+
Sbjct: 60  RRFYNTLLKKCTVFKLLIQGRIVHAHILQS--IFRHDIVMGNTLLNMYAKCGSLEEARKV 117

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA--- 394
           F  M + +D V+WT +ISG+ Q+     A+ FF QM R G  PN FT S ++ A  A   
Sbjct: 118 FEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176

Query: 395 -VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                Q+H   +K  ++ +  VG+ALL+ Y + G++D+A  VF+ ++ ++ V+W+A++AG
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +A+   TE A+++++ +  +G +P+ F+++S+  AC++ +  +EQGK  HA  IK+    
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS-TGFLEQGKWVHAYMIKSGEKL 295

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
                + L+ MY+K G+I  A ++F R  KRD+VSWNS++  YAQHG  K+A+  F+EMR
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           R  +  + I+F+ V+TAC+H+GL+DEG  Y+++M  +  I P   HY  +VDL  RAG L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHYVTVVDLLGRAGDL 414

Query: 634 EKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMY 679
            +A+  I  MP   +A +W+ +L ACR+                L P D   +V+L N+Y
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A+ G W + ARVRK M +  VKKE   SW+E++N  + F+A D  HPQ  +I  K EE+ 
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            ++K+ GY PDTS+V+  +D + +E  L  HSE++A+AF L+ TP G+ + I KN+RVCG
Sbjct: 535 AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCG 594

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCHT IKL SK+  R+I+VRDTNRFHHFK+G CSC DYW
Sbjct: 595 DCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 209/414 (50%), Gaps = 43/414 (10%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +++LK C      + GR VH   ++S F  D+ +  +L+++Y +  ++E+ R+VF+ M +
Sbjct: 64  NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            + V+WT+L+SGY+++      L  F++M   G  PN FT S+V+   A E       Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +K G +    V +AL+ +Y +  ++ DA+ VFD +E R+ ++WN+++AG+      
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +A E F  M   G   +  ++ S+   C++T  L   + +H+ ++K+G          L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+K G + DA KIF  + + +DVVSW ++++ + Q+G    AV +F +M R G+RPN
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362

Query: 382 GFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             ++  +LTA                                   G+LDE    +EL+ +
Sbjct: 363 EISFLSVLTACS-------------------------------HSGLLDEGWHYYELMKK 391

Query: 442 KDIV--AWSAM----LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             IV  AW  +    L G A  GD   A++   ++    ++P    + +++NAC
Sbjct: 392 DGIVPEAWHYVTVVDLLGRA--GDLNRALRFIEEMP---IEPTAAIWKALLNAC 440



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 164/325 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F++ PQR+FV +  L+  Y +     +AL  F  + R G      TLSSV+K     
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H  CVK GF  +V+V ++L+DLY R   ++D + VFD +   N VSW +L+
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    ++ LELF  M  +G +P+ F+++++ G  +  G +     VH  +IK+G +
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +V    N L+ MY KS  + DAR +FD +  RD ++WNS++  Y  +    EA   F  M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G      +F+SV+  C+ +  L      +  + K+GI  +      ++    + G +
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414

Query: 332 EDASKIFSMMREMKDVVSWTAMISG 356
             A +    M        W A+++ 
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNA 439


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/739 (34%), Positives = 410/739 (55%), Gaps = 21/739 (2%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           ++  +++   +   R +FD M E   VSWT L+ GY ++  +     L+  M+  GI+P+
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
             T  T+L    +       VQ+HT VIK G E    VCN+L+  Y K+  +  A  +F 
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M ++D++T+NS++ GY    L+ EA E F  +  +G + +  TF +++       + + 
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +Q+H  VLK    ++  +   L+  YSK  ++++  K+F  M E+ D +S+  +I+ + 
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPEL-DGISYNVVITSYA 318

Query: 359 QNGAIDLAVNFF--CQMTREGVR--PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
            NG    + + F   Q TR   R  P     SI  ++       Q+H   I         
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V  AL++ Y K     EA K+F+ I  K  V W+AM++ Y Q G  E  + ++  +   G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           V  ++ TF+S++ AC A  A++  G+Q H+  I++   + +   SAL+  Y+K G +  A
Sbjct: 439 VPADQATFASILRAC-ANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            + F    +R+ VSWN++I  YAQ+G+    L  F++M +   + D ++F+ V++AC+H 
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           G V+E   +F+ M   + + P  EHY+ MVD+  R G  ++A  ++  MPF  S  +W +
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617

Query: 655 VLAACR--------------LISLQP-HDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           VL +CR              L +++   D+A Y+ +SN+YA  G W   A+V+K M DR 
Sbjct: 618 VLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           V+K   YSW+E+K++T+ F A D SHP+  +I  K+  LS  ++  GYKPDT+  L D+D
Sbjct: 678 VRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVD 737

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           +  K   L  HSER AIAF L+ TP G+P+ ++KNLR C DCH  IK+IS++  R+I+VR
Sbjct: 738 EVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVR 797

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D++RFHHFK+G+CSCGDYW
Sbjct: 798 DSSRFHHFKDGVCSCGDYW 816



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 244/465 (52%), Gaps = 5/465 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + LFD   +R  V +  L+  Y + +  +EA  L+  +RR G+     TL ++L   G
Sbjct: 92  KARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFG 151

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L       Q+H   +K G+  ++ V  SLVD Y +T+ +    ++F  M   + V++ S
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L++GY+   +N+  +ELF  +   GIKP+ FTF+ +L             QVH  V+K  
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V NAL+  Y K   V +   +F  M + D I++N ++  Y  N    E+F+ F 
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFR 331

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +     +  +  F +++ +  ++  LR+ RQ+H Q +  G +F+  +   L+  Y+KC 
Sbjct: 332 KLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCN 391

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
             ++A KIF  +   K  V WTAMIS ++Q G  +  +N F  M R GV  +  T++ IL
Sbjct: 392 GDKEAQKIFDNI-ACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   ++      Q+H+ +I++ +  +   G+ALL+ Y K G + +A K F  + E++ V
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSV 510

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           +W+A+++ YAQ G+ +G +  ++Q+   G KP+  +F SV++AC+
Sbjct: 511 SWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/428 (29%), Positives = 223/428 (52%), Gaps = 15/428 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF     ++ V +N L+  Y  + L++EA+ LFL +   G+     T +++L     L D
Sbjct: 197 LFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDD 256

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG+QVH   +K+ F  +V V  +L+D Y + + V++  ++F +M E + +S+  +++ 
Sbjct: 257 TKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITS 316

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA N       +LF ++Q        F F+T+L +      +    Q+H   I  G    
Sbjct: 317 YAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFE 376

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           + V NAL+ MY K    ++A+ +FD +  + ++ W +M++ YV    H E    F++M  
Sbjct: 377 SRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRR 436

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKM 331
            G    ++TF S+++ CA    + L RQLHS ++++G  F  N+ +G  L+  Y+KCG M
Sbjct: 437 TGVPADQATFASILRACANLASISLGRQLHSLLIRSG--FMSNVYSGSALLDTYAKCGCM 494

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA K F  M E ++ VSW A+IS + QNG +D  +N F QM + G +P+  ++  +L+A
Sbjct: 495 TDAIKSFGEMPE-RNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSA 553

Query: 392 -------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKD 443
                  + A+  F     I +   ++     T++++   + G  DEA K+  E+  E  
Sbjct: 554 CSHCGFVEEALWHFNSMTQIYEVTPKREHY--TSMVDVLCRNGRFDEAEKLMTEMPFEPS 611

Query: 444 IVAWSAML 451
            + WS++L
Sbjct: 612 EIMWSSVL 619



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 246/490 (50%), Gaps = 14/490 (2%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
           G  PN+   +  +    + G +  A QV   M  KN     T   N +IS +LK   +  
Sbjct: 38  GFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKN-----TISLNMMISGHLKFGKLSK 92

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR +FDGM +R +++W  ++ GY+ +    EAF  + +M   G E    T V+++     
Sbjct: 93  ARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGE 152

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
            +   +  Q+H+ V+K G +++  +   L+ AY K   +  AS++F  M   KD V++ +
Sbjct: 153 LETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNS 211

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
           +++G+   G  + A+  F ++   G++P+ FT++ +L+A   +       QVH  ++KTN
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +  +  VG ALL+ Y K   +DE  K+F  + E D ++++ ++  YA  G  + +  ++R
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFR 331

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           +L        +F F+++++  T+ S  +  G+Q H  +I    N    V +ALV MY+K 
Sbjct: 332 KLQFTRFDRRQFPFATLLSIATS-SLNLRMGRQIHCQAITVGANFESRVENALVDMYAKC 390

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
              + A ++F     +  V W +MI  Y Q G  ++ + VF +MRR  +  D  TF  ++
Sbjct: 391 NGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASIL 450

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC +   +  G+Q   +++    +   +   S ++D Y++ G +  A+     MP   S
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFM-SNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNS 509

Query: 649 ATVWRTVLAA 658
            + W  +++A
Sbjct: 510 VS-WNALISA 518



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ Q +FD    ++ V +  ++  Y +   H+E +N+F  +RR G+P   +T +S+L+ C
Sbjct: 394 KEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRAC 453

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     GRQ+H   ++SGF  +V   ++L+D Y +   + D  + F +M E N VSW 
Sbjct: 454 ANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWN 513

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +L+S YA+N   D  L  F +M   G KP+S +F +VL   +  G V  A+
Sbjct: 514 ALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEAL 564



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 131/298 (43%), Gaps = 44/298 (14%)

Query: 386 SIILTAQPAVSP-----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF---- 436
           +++L   PA  P       + AHI+KT +  +       +N ++++G L  A +VF    
Sbjct: 11  NLVLRNSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMP 70

Query: 437 ------------------------ELID---EKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                                   EL D   E+  V+W+ ++ GY Q   ++ A ++Y  
Sbjct: 71  AKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYAD 130

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGK---QFHACSIKAKLNNALCVSSALVTMYS 526
           +   G++P+  T  ++++        +E      Q H   IK      L V ++LV  Y 
Sbjct: 131 MRRGGIEPDYVTLVTLLSGF----GELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYC 186

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K   +  AS++FK    +D V++NS++ GY+  G  ++A+E+F E+    ++    TF  
Sbjct: 187 KTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAA 246

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           +++A         GQQ    ++  + ++      + ++D YS+   +++   +   MP
Sbjct: 247 LLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG-NALLDYYSKHDQVDEVGKLFYEMP 303


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/578 (40%), Positives = 362/578 (62%), Gaps = 21/578 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + S+I  CA  + L  AR +H+ +  +       +   L+  Y KCG + DA ++F
Sbjct: 63  TPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVF 122

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M   +D+ SWT++I+G+ QN   D A+     M R   +PNGFT++ +L A  A +  
Sbjct: 123 DGM-PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS 181

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA  +K ++     VG+ALL+ Y + G +D A  VF+ ++ K+ V+W+A++AG+
Sbjct: 182 GIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGF 241

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ GD E  + ++ ++   G +   FT+SSV +A  A   A+EQGK  HA  IK+    +
Sbjct: 242 ARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA-IAGIGALEQGKWVHAHMIKSGERLS 300

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V + ++ MY+K G++  A +VF R  K+D+V+WNSM+  +AQ+G  ++A+  F+EMR+
Sbjct: 301 AFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRK 360

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  + ITF+ ++TAC+H GLV EG+QYFD+M  E+++ P ++HY  +VDL  RAG+L 
Sbjct: 361 CGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLN 419

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
            A+  I +MP   +A VW  +L +CR+                L P D+   VLL N+YA
Sbjct: 420 DALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYA 479

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +TG W   ARVRK+M    VKKE   SW+E++N  + F+A D +HP+S +IY K EE+S 
Sbjct: 480 STGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISI 539

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           +++ AGY P+T YVL  +D++ ++A L  HSE++A+AF L+  P GA ++I+KN+R+CGD
Sbjct: 540 QIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGD 599

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH+  + ISK+ +R+IVVRDTNRFHHF  G CSCGDYW
Sbjct: 600 CHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 174/360 (48%), Gaps = 6/360 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R +H     S FA  V +  SL+ LY +   V D RRVFD M   ++ SWTSL++GYA+N
Sbjct: 84  RAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQN 143

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
            M D  L L   M     KPN FTF+++L             Q+H + +K        V 
Sbjct: 144 DMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVG 203

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           +AL+ MY +   +  A AVFD +E ++ ++WN+++AG+            F  M   G E
Sbjct: 204 SALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 263

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T  T+ SV    A    L   + +H+ ++K+G      +   ++  Y+K G M DA K+
Sbjct: 264 ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKV 323

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPA 394
           F  + + KDVV+W +M++   Q G    AV  F +M + GV  N  T+  ILTA      
Sbjct: 324 FDRV-DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL 382

Query: 395 VSPFQVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEA-AKVFELIDEKDIVAWSAMLA 452
           V   + +  ++K  N E        +++   + G+L++A   +F++  +     W A+L 
Sbjct: 383 VKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 442



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 156/323 (48%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R+   +  L+  Y ++ +  EAL L  G+ R      G T +S+LK  G  
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGAS 178

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H   VK  +  DV V ++L+D+Y R   ++    VFD +   N VSW +L+
Sbjct: 179 ASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALI 238

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    +  L +F  MQ  G +   FT+S+V   +A  G +     VH  +IK+G  
Sbjct: 239 AGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGER 298

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N ++ MY KS  + DAR VFD ++ +D +TWNSM+  +    L  EA   F  M
Sbjct: 299 LSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G  L + TF+S++  C+    ++  +Q    + +  ++ + +    ++    + G +
Sbjct: 359 RKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLL 418

Query: 332 EDASKIFSMMREMKDVVSWTAMI 354
            DA      M        W A++
Sbjct: 419 NDALVFIFKMPMKPTAAVWGALL 441


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/674 (36%), Positives = 397/674 (58%), Gaps = 23/674 (3%)

Query: 97  GRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           GR +H + +K   +   + ++ SL++ Y +  ++   + VFD ++  +V+SW  L++GY+
Sbjct: 26  GRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYS 85

Query: 156 RNKMNDR--VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +        V+ELF RM+ + I PN+ TFS +    ++   +    Q H + IK      
Sbjct: 86  QQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYD 145

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V ++L++MY K+ ++ +AR VFD M +R+ +TW +M++GY    L  EAFE F  M  
Sbjct: 146 VFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRR 205

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              ++    F SV+   A  + +   +Q+H   +K G+    +I   L+  Y+KCG ++D
Sbjct: 206 EEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDD 265

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           + ++F M  + K+ ++W+AMI+G+ Q+G    A+  F +M   G+ P+ FT   +L A  
Sbjct: 266 SLQVFEMSND-KNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACS 324

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
                    QVH +++K  +E    + TAL++ Y K G+ ++A K F  + + D+V W++
Sbjct: 325 DACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTS 384

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+AGY Q G+ E A+ +Y ++  EG+ PNE T +SV+ AC+   AA +QG+Q HA +IK 
Sbjct: 385 MIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNL-AAFDQGRQIHARTIKY 443

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L   + + SAL TMY+K GN+E  + VF+R  +RD++SWN+MI G +Q+G+ K+ALE+F
Sbjct: 444 GLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELF 503

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           +EMR+QD + D +TF+ V++AC+H GLVD G  YF +M +E  + P +EHY+CMVD+ SR
Sbjct: 504 EEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSR 563

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L +A + I          +WR +L ACR              L+ L   +S+ YVLL
Sbjct: 564 AGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLL 623

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           S +Y A G  ++  RVR +M  R V KE G SWIE+K+  + F+ GD  HP   +I +++
Sbjct: 624 SGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEI 683

Query: 736 EELSTRLKDAGYKP 749
             LS ++KD GY+P
Sbjct: 684 LRLSKQMKDEGYQP 697



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 262/476 (55%), Gaps = 12/476 (2%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEA--LNLFLGIRRLGLPLFG 78
           FY+K     K + +FDR   ++ + +N L+  Y +      +  + LF  +R   +    
Sbjct: 52  FYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNA 111

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
            T S +      L    FG+Q H   +K     DV V +SL+++Y +   + + R VFD 
Sbjct: 112 HTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDR 171

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M E N V+W +++SGYA  ++     E+F  M+ E    N F F++VL  LA    V + 
Sbjct: 172 MPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSG 231

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            Q+H + +K G  V  S+ NAL++MY K   + D+  VF+   D++SITW++M+ GY  +
Sbjct: 232 KQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQS 291

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               +A + F+ M  AG   +  T V V+  C+    +   +Q+H+ +LK G +    I 
Sbjct: 292 GDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIM 351

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y+K G  EDA K F+ +++  D+V WT+MI+G++QNG  + A++ +C+M  EG+
Sbjct: 352 TALVDMYAKSGVTEDARKGFNYLQQ-PDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGI 410

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            PN  T + +L A   ++ F    Q+HA  IK       ++G+AL   Y K G L+E   
Sbjct: 411 LPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNI 470

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           VF  + E+DI++W+AM++G +Q G  + A++++ ++  +  KP++ TF +V++AC+
Sbjct: 471 VFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACS 526


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/735 (36%), Positives = 424/735 (57%), Gaps = 24/735 (3%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            LF R P RN V +N ++  + +     EA+  F  +R+ G+    STL SVL     L  
Sbjct: 283  LFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAA 342

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              FG  VH E +K G   +V V +SLV +Y +   +E  ++VFD +NE NVV W ++L G
Sbjct: 343  LDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGG 402

Query: 154  YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            Y +N   + V+ELF  M+  G  P+ FT+S++L   A    +    Q+H+++IKN     
Sbjct: 403  YVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASN 462

Query: 214  TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
              V NAL+ MY KS  + DAR  F+ + +RD+++WN ++ GYV  E  +EAF  F  M L
Sbjct: 463  LFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNL 522

Query: 274  AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
             G      +  S++  CA+ + L   +Q+H   +K G +      + L+  Y+KCG ++ 
Sbjct: 523  LGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDS 582

Query: 334  ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
            A KI + M E + VVS  A+I+G+ Q   ++ AVN F  M  EG+     T++ +L A  
Sbjct: 583  AHKILACMPE-RSVVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITFASLLDACH 640

Query: 392  --QPAVSPFQVHAHIIKTNYEKSFS-VGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAW 447
              Q      Q+H+ I+K   +     +G +LL  Y+      +A+ +F E  + K  V W
Sbjct: 641  EQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVW 700

Query: 448  SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
            +AM++G +Q   +  A+++Y+++ S  V P++ TF S + AC   S +++ G + H+   
Sbjct: 701  TAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVS-SIKDGTETHSLIF 759

Query: 508  KAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKAL 566
                ++    SSALV MY+K G+++S+ +VFK   RK+D++SWNSMI G+A++G+ + AL
Sbjct: 760  HTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDAL 819

Query: 567  EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             VF EM++  +  D +TF+GV+TAC+H+G V EG+  FD+MVN + + P  +H +CMVDL
Sbjct: 820  RVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDL 879

Query: 627  YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
              R G L++A + IN++ F   A VW T+L ACR              LI L+P +S+ Y
Sbjct: 880  LGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPY 939

Query: 673  VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
            VLLSN+YAA+G+W E   +R+ M ++ VKK  G SWI V  +T  F+AGD SH  +++I 
Sbjct: 940  VLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEID 999

Query: 733  SKLEELSTRLKDAGY 747
            + L++L+  +++  Y
Sbjct: 1000 AILKDLTPLMRENDY 1014



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 184/640 (28%), Positives = 316/640 (49%), Gaps = 47/640 (7%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F +   ++ + +N +L  + +       +  F  +   G+     T + VL +C  L   
Sbjct: 117 FKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMV 176

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             GRQVHC  VK GF        +L+ +Y + N + D R +FD   E + VSWTS++ GY
Sbjct: 177 KCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGY 236

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +  + +  +++F  M+  G +P+   F TV+    D G                     
Sbjct: 237 IKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLG--------------------- 275

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
                          + +A  +F  M +R+ + WN M++G+      +EA E F NM  A
Sbjct: 276 --------------RLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKA 321

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G + TRST  SV+   A+   L     +H++ LK G+  +  + + L+  Y+KCGKME A
Sbjct: 322 GIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAA 381

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            K+F  + E ++VV W AM+ G++QNG  +  +  F  M   G  P+ FTYS IL+A   
Sbjct: 382 KKVFDTLNE-QNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACAC 440

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +       Q+H+ IIK  +  +  VG AL++ Y K G L++A + FELI  +D V+W+ +
Sbjct: 441 LKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVI 500

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           + GY Q  D   A  ++R++   G+ P+E + +S+++AC A    +EQGKQ H  S+K  
Sbjct: 501 IVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSAC-ASVRGLEQGKQVHCLSVKTG 559

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
               L   S+L+ MY+K G I+SA ++     +R +VS N++I GYAQ  + ++A+ +F+
Sbjct: 560 QETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFR 618

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           +M  + +    ITF  ++ AC     ++ G+Q   +++              ++ +Y  +
Sbjct: 619 DMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNS 678

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAA-----CRLISLQ 665
                A  + +      SA VW  +++      C +++LQ
Sbjct: 679 LRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQ 718



 Score =  286 bits (732), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 170/552 (30%), Positives = 285/552 (51%), Gaps = 48/552 (8%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H + +K GF     +   +VDLY +  +V+   R F  + + ++++W S+LS +++   
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
              V++ F  +   G+ PN FTF+ VL   A   +V    QVH  V+K G E ++    A
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA 200

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI MY K   + DAR++FDG  + D ++W SM+ GY+   L  EA + F  M   G E  
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPD 260

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           +  FV+VI                                    AY   G++++AS +FS
Sbjct: 261 QVAFVTVIN-----------------------------------AYVDLGRLDNASDLFS 285

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
            M   ++VV+W  MISGH + G    A+ FF  M + G++    T   +L+A  +++   
Sbjct: 286 RMPN-RNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALD 344

Query: 400 ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
               VHA  +K     +  VG++L++ Y K G ++ A KVF+ ++E+++V W+AML GY 
Sbjct: 345 FGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYV 404

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G     ++++  + S G  P++FT+SS+++AC A    ++ G Q H+  IK K  + L
Sbjct: 405 QNGYANEVMELFFNMKSCGFYPDDFTYSSILSAC-ACLKYLDLGHQLHSVIIKNKFASNL 463

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V +ALV MY+K G +E A + F+  R RD VSWN +I GY Q     +A  +F+ M   
Sbjct: 464 FVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLL 523

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMV---NEHHIYPTMEHYSCMVDLYSRAGM 632
            +  D ++   +++AC     +++G+Q   + V    E  +Y      S ++D+Y++ G 
Sbjct: 524 GILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSG----SSLIDMYAKCGA 579

Query: 633 LEKAMDIINRMP 644
           ++ A  I+  MP
Sbjct: 580 IDSAHKILACMP 591



 Score =  255 bits (651), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 164/567 (28%), Positives = 285/567 (50%), Gaps = 12/567 (2%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           +V  E  K G   D     ++++ Y+    +++   +F  M   NVV+W  ++SG+A+  
Sbjct: 247 KVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGG 306

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                +E F  M+  GIK    T  +VL  +A    +   + VH   +K G      V +
Sbjct: 307 YGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGS 366

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +L+SMY K   +  A+ VFD + +++ + WN+M+ GYV N    E  E F NM   G   
Sbjct: 367 SLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYP 426

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T+ S++  CA  K L L  QLHS ++KN    +  +   L+  Y+K G +EDA + F
Sbjct: 427 DDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQF 486

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
            ++R  +D VSW  +I G++Q      A + F +M   G+ P+  + + IL+A  +V   
Sbjct: 487 ELIRN-RDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGL 545

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               QVH   +KT  E     G++L++ Y K G +D A K+   + E+ +V+ +A++AGY
Sbjct: 546 EQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGY 605

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN-N 513
           AQI + E AV ++R +  EG+   E TF+S+++AC      +  G+Q H+  +K  L  +
Sbjct: 606 AQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACH-EQQKLNLGRQIHSLILKMGLQLD 663

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
              +  +L+ MY        AS +F      +  V W +MI G +Q+  +  AL+++KEM
Sbjct: 664 DEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEM 723

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME-HYSCMVDLYSRAG 631
           R  ++  D  TF+  + AC     + +G +   ++   H  + + E   S +VD+Y++ G
Sbjct: 724 RSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIF--HTGFDSDELTSSALVDMYAKCG 781

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAA 658
            ++ +M +   M        W +++  
Sbjct: 782 DVKSSMQVFKEMSRKKDVISWNSMIVG 808



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 278/560 (49%), Gaps = 21/560 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   ++N V +N +L  Y ++    E + LF  ++  G      T SS+L  C CL
Sbjct: 382 KKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACL 441

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H   +K+ FA ++ V  +LVD+Y ++  +ED R+ F+ +   + VSW  ++
Sbjct: 442 KYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVII 501

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY + +       LF RM + GI P+  + +++L   A    +    QVH + +K G E
Sbjct: 502 VGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQE 561

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                 ++LI MY K   +  A  +   M +R  ++ N+++AGY    L  +A   F +M
Sbjct: 562 TKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDM 620

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYSKCGK 330
            + G   T  TF S++  C   ++L L RQ+HS +LK G+  D   +   L+  Y    +
Sbjct: 621 LVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLR 680

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
             DAS +FS     K  V WTAMISG  QN    +A+  + +M    V P+  T+   L 
Sbjct: 681 TTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALR 740

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
           A   VS      + H+ I  T ++      +AL++ Y K G +  + +VF E+  +KD++
Sbjct: 741 ACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVI 800

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK----- 500
           +W++M+ G+A+ G  E A++++ ++    V P++ TF  V+ AC+  S  V +G+     
Sbjct: 801 SWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACS-HSGRVSEGRLIFDM 859

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQH 559
             +   ++ + ++  C    +V +  + G+++ A E + K   + D   W +M+     H
Sbjct: 860 MVNLYGMQPRADHCAC----MVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIH 915

Query: 560 G---HTKKALEVFKEMRRQD 576
           G     ++A E   E+  Q+
Sbjct: 916 GDDIRGQQAAEKLIELEPQN 935



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 177/362 (48%), Gaps = 26/362 (7%)

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           +HA  +K  +     +G  +++ Y K   +D A + F+ +++KDI+AW+++L+ +++ G 
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
               VK +  L + GV PNEFTF+ V+++C A    V+ G+Q H   +K    +      
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSC-ARLEMVKCGRQVHCNVVKMGFESISYCEG 199

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           AL+ MY+K   +  A  +F    + D VSW SMI GY + G  ++A++VF+EM +   E 
Sbjct: 200 ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEP 259

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           D + F+ VI A    G +D     F  M N + +      ++ M+  +++ G   +A++ 
Sbjct: 260 DQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVV-----AWNLMISGHAKGGYGVEAIEF 314

Query: 640 INRMPFA---ASATVWRTVLAACRLISLQPHDSAIYV--------LLSNMYAATGHWQER 688
              M  A   ++ +   +VL+A  + SL   D  + V        L SN+Y  +      
Sbjct: 315 FQNMRKAGIKSTRSTLGSVLSA--IASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMY 372

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
           A+  K+   +KV        + + N   + L G + +  +N++     EL   +K  G+ 
Sbjct: 373 AKCGKMEAAKKVFDTLNEQNVVLWN---AMLGGYVQNGYANEVM----ELFFNMKSCGFY 425

Query: 749 PD 750
           PD
Sbjct: 426 PD 427



 Score = 46.6 bits (109), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 54/103 (52%)

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K  HA S+K    +   + + +V +Y+K  +++ A   FK+   +D+++WNS++  +++ 
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           G     ++ F  +    +  +  TF  V+++C    +V  G+Q
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQ 181


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/739 (34%), Positives = 414/739 (56%), Gaps = 22/739 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL--GLPLFGSTLSSVLKTCGCL 91
           LFDR P +N V +   +  + +    ++A+ LF   +R   G       L+S L+ C   
Sbjct: 68  LFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQS 127

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               FG+QVH   V+ G   +V V T+L++LY +   ++    VFD +   N V+WT+++
Sbjct: 128 RAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVI 187

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY++       LELF +M ++G++P+ F  ++ +   +  G +    Q H    +   E
Sbjct: 188 TGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVE 247

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              SV NALI +Y K   +  AR +FD ME+R+ ++W +M+AGY+ N    EA   F  +
Sbjct: 248 TDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQL 307

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +       S++  C +   +   RQ+H+  +K  ++ D  ++  L+  Y+KC  +
Sbjct: 308 SQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHL 367

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A  +F  + E  D +S+ AMI G+ + G +  A++ F +M    ++P+  T+  +L  
Sbjct: 368 TEARAVFEALAE-DDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGV 426

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             + S      Q+H  I+K+        G++L++ Y K  ++++A  VF L+  +D+V W
Sbjct: 427 SSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIW 486

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AM+ G AQ    E AVK++ QL   G+ PNEFTF +++   +    ++  G+QFHA  I
Sbjct: 487 NAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTL-VSMFHGQQFHAQII 545

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           KA  ++   VS+AL+ MY+K G I+    +F+    +D++ WNSMI  YAQHG  ++AL 
Sbjct: 546 KAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALY 605

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           VF+ M    +E + +TF+GV++AC HAGLVDEG ++FD M  ++ I P  EHY+ +V+L+
Sbjct: 606 VFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLF 665

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRLIS--------------LQPHDSAIYV 673
            R+G L  A + I RMP   +A VWR++L+AC L                  P DS   V
Sbjct: 666 GRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSV 725

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           L+SN+YA+ G W +  ++R+ M+   V KE GYSWIEV  + ++F+A    HP+++ IYS
Sbjct: 726 LMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYS 785

Query: 734 KLEELSTRLKDAGYKPDTS 752
            L+EL++ LK+ GY PDTS
Sbjct: 786 LLDELTSILKNGGYLPDTS 804



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 165/547 (30%), Positives = 287/547 (52%), Gaps = 19/547 (3%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN 160
           H   V +G   D+ ++  L+  Y +   V D RR+FD M   N+VSW S +S +A++   
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 161 DRVLELFHRMQ--VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +  + LF   Q    G  PN F  ++ L   A    V+   QVH + ++ G +    V  
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI++Y K   +  A  VFD +  ++ +TW +++ GY        A E F  MGL G   
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            R    S +  C+    L   RQ H    +  ++ D ++   L+  Y KC ++  A K+F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M E +++VSWT MI+G++QN     A+  F Q+++EG +P+ F  + IL +  +++  
Sbjct: 274 DCM-ENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAI 332

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               QVHAH IK N E    V  +L++ Y K   L EA  VFE + E D ++++AM+ GY
Sbjct: 333 WQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGY 392

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +++GD  GA+ ++ ++    +KP+  TF S++   ++ S A+E  KQ H   +K+  +  
Sbjct: 393 SRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQS-AIELSKQIHGLIVKSGTSLD 451

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L   S+L+ +YSK   +E A  VF     RD+V WN+MI G AQ+   ++A+++F +++ 
Sbjct: 452 LYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQV 511

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV-----NEHHIYPTMEHYSCMVDLYSR 629
             L  +  TF+ ++T  +    +  GQQ+   ++     ++HH+       + ++D+Y++
Sbjct: 512 SGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHV------SNALIDMYAK 565

Query: 630 AGMLEKA 636
            G +++ 
Sbjct: 566 CGFIKEG 572



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 229/436 (52%), Gaps = 7/436 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD    RN V +  ++  Y ++S   EA+ +F  + + G        +S+L +CG L
Sbjct: 270 RKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSL 329

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQVH   +K+    D  V  SL+D+Y +  ++ + R VF+ + E + +S+ +++
Sbjct: 330 AAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMI 389

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY+R       +++F +M+   +KP+  TF ++LGV + +  +  + Q+H +++K+G  
Sbjct: 390 EGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTS 449

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +     ++LI +Y K  +V DA+AVF+ M +RD + WN+M+ G   NE   EA + FN +
Sbjct: 450 LDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQL 509

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            ++G      TFV+++ + +T   +   +Q H+Q++K G D DH++   L+  Y+KCG +
Sbjct: 510 QVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFI 569

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           ++   +F      KDV+ W +MIS + Q+G  + A+  F  M   GV PN  T+  +L+A
Sbjct: 570 KEGRLLFESTLG-KDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSA 628

Query: 392 ---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIV 445
                 V     H   +KT Y  E       +++N + + G L  A +  E +  E    
Sbjct: 629 CAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAA 688

Query: 446 AWSAMLAGYAQIGDTE 461
            W ++L+     G+ E
Sbjct: 689 VWRSLLSACHLFGNVE 704



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 243/450 (54%), Gaps = 13/450 (2%)

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +  G      + N L+  Y K   VRDAR +FD M  ++ ++W S ++ +  +   
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 262 MEAFETFNNMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            +A   F     A      + F+  S ++ CA ++ +   +Q+H   ++ G+D +  + T
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+K G ++ A  +F  +  +K+ V+WTA+I+G+ Q G   +A+  F +M  +GVR
Sbjct: 154 ALINLYAKVGCIDAAMLVFDAL-PVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVR 212

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+ F  +  ++A  A+       Q H +  +   E   SV  AL++ Y K   L  A K+
Sbjct: 213 PDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKL 272

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ ++ +++V+W+ M+AGY Q      A+ ++ QL+ EG +P+ F  +S++N+C +  AA
Sbjct: 273 FDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSL-AA 331

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           + QG+Q HA +IKA L +   V ++L+ MY+K  ++  A  VF+   + D +S+N+MI G
Sbjct: 332 IWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 391

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y++ G    A++VF +MR   L+   +TF+ ++   +    ++  +Q   ++V       
Sbjct: 392 YSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSG---T 448

Query: 616 TMEHY--SCMVDLYSRAGMLEKAMDIINRM 643
           +++ Y  S ++D+YS+  ++E A  + N M
Sbjct: 449 SLDLYAGSSLIDVYSKFSLVEDAKAVFNLM 478



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 10/147 (6%)

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L +++ L+  YSK G +  A  +F R   ++LVSW S I  +AQHG  + A+ +F   +R
Sbjct: 46  LFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQR 105

Query: 575 QDLEFDGITFI--GVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSR 629
                    F+    + AC  +  V  GQQ   + V    + ++Y      + +++LY++
Sbjct: 106 ASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVG----TALINLYAK 161

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVL 656
            G ++ AM + + +P     T W  V+
Sbjct: 162 VGCIDAAMLVFDALPVKNPVT-WTAVI 187


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 277/831 (33%), Positives = 443/831 (53%), Gaps = 30/831 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF   P+RN V +  L+     +   +EAL  +  +RR  +    +  ++V+  CG L
Sbjct: 99  QRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSL 158

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V G QV    + SG  R V+V+ SL+ +      V D  ++F  M E + VSW +L+
Sbjct: 159 EDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALV 218

Query: 152 SGYARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           S Y+   +  +   +F  M+  G+ + ++ T  +++ V A    V+    VH++ ++ G 
Sbjct: 219 SMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGL 278

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V NAL++MY  +  + DA  +F  M  RD I+WN+M++ YV N  +M+A +T   
Sbjct: 279 HSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQ 338

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKC 328
           +        R TF S +  C++   L   R +H+  L+  +   HN+  G  L+  Y KC
Sbjct: 339 LLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQ--LSLHHNLLVGNSLITMYGKC 396

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGH--LQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
             +EDA +IF +M    DVVS   +I  +  L++G   + V F+  M R  V+ N  T  
Sbjct: 397 NSIEDAERIFQLMPN-HDVVSCNILIGSYAVLEDGTKAMQVFFW--MRRGEVKLNYITIV 453

Query: 387 IILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
            IL +  + +  +     +HA+ I   +     V  +L+  Y K G L+ +  VF+ I  
Sbjct: 454 NILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIIN 513

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           + +V+W+AM+A   Q G  E ++K++  +  +G   +    +  +++ +A  A++E+G Q
Sbjct: 514 RSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSS-SASLASLEEGMQ 572

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H   +K  L N   V +A + MY K G ++   ++      R    WN++I GYA++G+
Sbjct: 573 LHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGY 632

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
            K+A E FK M       D +TF+ +++AC+HAGLVD+G  Y++ M +   + P ++H  
Sbjct: 633 FKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCV 692

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQPH 667
           C+VD+  R G   +A   I  MP   +  +WR++L              AA RL+ L P 
Sbjct: 693 CIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPF 752

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           D + YVLLSN+YA +  W +  RVR  M    + K    SW++ K +  +F  GD SH  
Sbjct: 753 DDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKH 812

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
           +++IY KL+E+  +L++ GY  DTS  L D D+E KE  L  HSE+LA+A+GL+  P G 
Sbjct: 813 ADKIYMKLDEILLKLREVGYVADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGC 872

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ++I KNLRVC DCH V KL+S +  R+IV+RD  RFHHFK G CSC D+W
Sbjct: 873 TVRIFKNLRVCADCHLVFKLVSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 182/620 (29%), Positives = 320/620 (51%), Gaps = 32/620 (5%)

Query: 55  RDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD-HVFGRQVHCECVKSGFARDV 113
           RDS    A ++  G+R  G+PL G  L+S++  C    +    G  +H    K+G   +V
Sbjct: 23  RDS---TAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHALTQKAGLMVNV 79

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
            + T+L+ LY    +V D +R+F +M E NVVSWT+L+   + N   +  L  + RM+ E
Sbjct: 80  YIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEALGYYRRMRRE 139

Query: 174 GIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
            I  N+  F+TV+   G L DE      +QV + VI +G +   SV N+LISM      V
Sbjct: 140 RIACNANAFATVVSLCGSLEDE---VAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRV 196

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR---STFVSVI 287
            DA  +F  ME+RD+++WN++V+ Y    L  ++F  F++M   G  L R   +T  S+I
Sbjct: 197 HDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGG--LLRHDATTLCSLI 254

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
            +CA++  +     +HS  L+ G+     +   L+  YS  GK+ DA  +F  M   +D+
Sbjct: 255 SVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSR-RDL 313

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           +SW  MIS ++QNG    A+    Q+      P+  T+S  L A  +         VHA 
Sbjct: 314 ISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAM 373

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
            ++ +   +  VG +L+  Y K   +++A ++F+L+   D+V+ + ++  YA + D   A
Sbjct: 374 TLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKA 433

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           ++++  +    VK N  T  +++ + T+ +     G   HA +I A   +   VS++L+T
Sbjct: 434 MQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLIT 493

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY+K G++ES++ VF+R   R +VSWN+MI    QHGH +++L++F +MR      D I 
Sbjct: 494 MYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHIC 553

Query: 584 FIGVITACTHAGLVDEGQQYFDI-----MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
               +++      ++EG Q   +     + N+ H+       +  +D+Y + G +++ + 
Sbjct: 554 LAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHV------VNAAMDMYGKCGKMDEMLK 607

Query: 639 IINRMPFAASATVWRTVLAA 658
           ++   P       W T+++ 
Sbjct: 608 MLPD-PAIRPQQCWNTLISG 626



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 254/522 (48%), Gaps = 15/522 (2%)

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA--DEGIVATAVQVHT 203
           SW + +SG  R   +     +   M+  G+  + F  ++++      +EG  A    +H 
Sbjct: 10  SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEG-RACGAAIHA 68

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
           +  K G  V   +  AL+ +Y   K V DA+ +F  M +R+ ++W +++    +N    E
Sbjct: 69  LTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEE 128

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   +  M         + F +V+ LC + ++     Q+ S V+ +G+    ++   L+ 
Sbjct: 129 ALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLIS 188

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
                G++ DA K+F  M E +D VSW A++S +   G    +   F  M R G+  +  
Sbjct: 189 MLGNLGRVHDAEKLFYRMEE-RDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDA 247

Query: 384 TYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           T    L +  A S +      VH+  ++T       V  AL+N Y   G L +A  +F  
Sbjct: 248 TTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWN 307

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  +D+++W+ M++ Y Q G+   A+K   QL      P+  TFSS + AC++P A ++ 
Sbjct: 308 MSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMD- 366

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G+  HA +++  L++ L V ++L+TMY K  +IE A  +F+     D+VS N +I  YA 
Sbjct: 367 GRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAV 426

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG-LVDEGQQYFDIMVNEHHIYPTM 617
                KA++VF  MRR +++ + IT + ++ + T +  L + G       +  H  + + 
Sbjct: 427 LEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTI--HAGFLSD 484

Query: 618 EHYS-CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           ++ S  ++ +Y++ G LE + ++  R+    S   W  ++AA
Sbjct: 485 DYVSNSLITMYAKCGDLESSNNVFQRI-INRSVVSWNAMIAA 525



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 4/167 (2%)

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           D +   +W   ++G  + G    A  + R +   GV  + F  +S++ AC         G
Sbjct: 4   DHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACG 63

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
              HA + KA L   + + +AL+ +Y  + ++  A  +F    +R++VSW +++   + +
Sbjct: 64  AAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSN 123

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE--GQQYF 604
           GH ++AL  ++ MRR+ +  +   F  V++ C    L DE  G Q F
Sbjct: 124 GHLEEALGYYRRMRRERIACNANAFATVVSLC--GSLEDEVAGLQVF 168



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +   ++F R   R+ V +N ++    +    +E+L LF+ +R  G  L    L+  + + 
Sbjct: 502 ESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSS 561

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G Q+H   +K G   D +V  + +D+Y +   +++  ++  D        W 
Sbjct: 562 ASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWN 621

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +L+SGYAR        E F  M   G  P+  TF T+L   +  G+V   +  +
Sbjct: 622 TLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYY 675


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/646 (38%), Positives = 385/646 (59%), Gaps = 28/646 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NALI+ Y K  ++  A  +FD +   D +++N+++  Y      + A   F  M   G  
Sbjct: 78  NALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLV 137

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   TF  VI  C     + L RQLHS    +G D   +++  L+  YSK G +E+A  +
Sbjct: 138 MDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMV 195

Query: 338 FSMM-REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           F+ M  E++D VSW +MI  + Q+     A+  +  M   G   + FT + +LT    V 
Sbjct: 196 FNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVE 255

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGI-LDEAAKVFELIDEKDIVAWSAML 451
                 Q HA  IKT + K+  VG+ L++ Y K G  + E+ KVFE I   D+V W+ M+
Sbjct: 256 DLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMI 315

Query: 452 AGYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +GY+Q  + +  A++ +RQ+   G  P++ +F   I+AC+  S+   QGKQFHA ++K++
Sbjct: 316 SGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSP-SQGKQFHALAMKSE 374

Query: 511 L-NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
           + +N + V++ALVTMYSK GN++ A ++F+R  + + V+ NS+I GYAQHG   ++L +F
Sbjct: 375 IPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLF 434

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           ++M    +    IT + +++AC H G V+EG++YF++M +   I P  EHYSCM+DL  R
Sbjct: 435 EQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGR 494

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L +A  +I+ MPF+  +  W  +L ACR               + L+P ++  Y++L
Sbjct: 495 AGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIML 554

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           ++MY+A   W+E AR+RKLM DR ++K+ G SWIE+  + + F+A D SHP+  +I+  L
Sbjct: 555 ASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYL 614

Query: 736 EELSTRLKDAGYKPDTSYVLQDID---DEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           +E+  ++K AGY PD  +     D   ++ KE +L+ HSE+LA+AFGL+ T  G PL +V
Sbjct: 615 DEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEPLLVV 674

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+CGDCH  IK +S + RR I VRD  RFH F++G CSCGDYW
Sbjct: 675 KNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 213/394 (54%), Gaps = 13/394 (3%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +L+  Y + + +     +FD + + ++VS+ +L++ YA        L LF  M+  G+  
Sbjct: 79  ALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVM 138

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           + FTFS V+    +   V    Q+H++   +G +   SV N+L++ Y K+ ++ +A  VF
Sbjct: 139 DGFTFSGVITACCNH--VGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVF 196

Query: 238 DGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           +GM  E RD ++WNSM+  Y  ++  ++A   + +M   G E+   T  SV+   +  ++
Sbjct: 197 NGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVED 256

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK-MEDASKIFSMMREMKDVVSWTAMI 354
           L    Q H++ +K G + + ++ +GL+  Y+KCG  M ++ K+F  +    D+V W  MI
Sbjct: 257 LSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICG-SDLVVWNTMI 315

Query: 355 SGHLQNGAIDL-AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           SG+ QN  + + A+  F QM R G  P+  ++   ++A   +S      Q HA  +K+  
Sbjct: 316 SGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEI 375

Query: 410 EKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
             +  SV  AL+  Y K G L +A K+F+ + + + V  ++++AGYAQ G    ++ ++ 
Sbjct: 376 PSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFE 435

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           Q+ +  + P   T  S+++AC A +  VE+GK++
Sbjct: 436 QMLAASIAPTSITLVSILSAC-AHTGRVEEGKKY 468



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 220/449 (48%), Gaps = 16/449 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+ PQ + V +N L+  Y        AL+LF  +R +GL + G T S V+  C C  +
Sbjct: 96  LFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITAC-C--N 152

Query: 94  HV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES--NVVSWTSL 150
           HV   RQ+H     SGF   V+V  SL+  Y +   +E+   VF+ M E   + VSW S+
Sbjct: 153 HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSM 212

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +  Y ++K   + L L+  M   G + + FT ++VL   +    ++  +Q H   IK G 
Sbjct: 213 IVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGF 272

Query: 211 EVVTSVCNALISMYLKSKM-VRDARAVFDGMEDRDSITWNSMVAGYVTN-ELHMEAFETF 268
                V + LI MY K    + ++R VF+ +   D + WN+M++GY  N EL +EA E F
Sbjct: 273 NKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECF 332

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSK 327
             M  AG      +FV  I  C+        +Q H+  +K+ I  +  ++   L+  YSK
Sbjct: 333 RQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSK 392

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG ++DA K+F  M +  + V+  ++I+G+ Q+G    ++N F QM    + P   T   
Sbjct: 393 CGNLQDARKLFQRMPQ-HNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVS 451

Query: 388 ILTA---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID-E 441
           IL+A      V   + + +++K  +  E      + +++   + G L EA ++ + +   
Sbjct: 452 ILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFS 511

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
               AW+A+L    + G+ E A K   Q 
Sbjct: 512 PGSAAWAALLGACRKYGNMELAEKAANQF 540



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 191/402 (47%), Gaps = 37/402 (9%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T  +F  ++K C   K+L   + LH+  LK+ I     +    ++ YSKC  +  A   F
Sbjct: 7   TLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAF 66

Query: 339 SMMRE------------------------------MKDVVSWTAMISGHLQNGAIDLAVN 368
           +   E                                D+VS+  +I+ +   G    A++
Sbjct: 67  NQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALS 126

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            F +M   G+  +GFT+S ++TA         Q+H+    + ++   SV  +LL  Y K 
Sbjct: 127 LFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKN 186

Query: 427 GILDEAAKVFELIDE--KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           GIL+EA  VF  + E  +D V+W++M+  Y Q      A+ +YR +   G + + FT +S
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG-NIESASEVFKRQRK 543
           V+   +     +  G QFHA +IK   N    V S L+ MY+K G  +  + +VF+    
Sbjct: 247 VLTTFSCVE-DLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICG 305

Query: 544 RDLVSWNSMICGYAQHGH-TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            DLV WN+MI GY+Q+   + +ALE F++M+R     D  +F+  I+AC++     +G+Q
Sbjct: 306 SDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQ 365

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           +  + +        +   + +V +YS+ G L+ A  +  RMP
Sbjct: 366 FHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP 407



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 182/350 (52%), Gaps = 13/350 (3%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQV 100
           R+ V +N ++  Y +     +AL L+  +   G  +   TL+SVL T  C+ D   G Q 
Sbjct: 204 RDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQF 263

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRTN-NVEDGRRVFDDMNESNVVSWTSLLSGYARNK- 158
           H + +K+GF ++ +V + L+D+Y +    + + R+VF+++  S++V W +++SGY++NK 
Sbjct: 264 HAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKE 323

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT---S 215
           ++   LE F +MQ  G  P+  +F   +   ++    +   Q H + +K+  E+ +   S
Sbjct: 324 LSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKS--EIPSNQIS 381

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V NAL++MY K   ++DAR +F  M   +++T NS++AGY  + +  E+   F  M  A 
Sbjct: 382 VNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAAS 441

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKN--GIDFDHNIRTGLMVAYSKCGKMED 333
              T  T VS++  CA T  +   ++ +  ++K+  GI+ +    + ++    + GK+ +
Sbjct: 442 IAPTSITLVSILSACAHTGRVEEGKK-YFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSE 500

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDL---AVNFFCQMTREGVRP 380
           A ++   M       +W A++    + G ++L   A N F Q+      P
Sbjct: 501 AERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 8/259 (3%)

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           H     +E +     AL+ AY K+ ++  A  +F+ I + D+V+++ ++  YA  GDT  
Sbjct: 64  HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLS 123

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ ++ ++   G+  + FTFS VI AC      +   +Q H+ +  +  ++ + V ++L+
Sbjct: 124 ALSLFGEMREMGLVMDGFTFSGVITACCNHVGLI---RQLHSLAFSSGFDSYVSVKNSLL 180

Query: 523 TMYSKKGNIESASEVFK--RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           T YSK G +E A  VF    +  RD VSWNSMI  Y QH    KAL ++++M  +  E D
Sbjct: 181 TYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEID 240

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-SCMVDLYSRAGMLEKAMDI 639
             T   V+T  +    +  G Q+    +     +    H  S ++D+Y++ G        
Sbjct: 241 MFTLASVLTTFSCVEDLSGGLQFHAKAIKTG--FNKNRHVGSGLIDMYAKCGAGMSESRK 298

Query: 640 INRMPFAASATVWRTVLAA 658
           +      +   VW T+++ 
Sbjct: 299 VFEEICGSDLVVWNTMISG 317



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 2/178 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRD-SLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           + + +F+     + V +N ++  Y ++  L  EAL  F  ++R G      +    +  C
Sbjct: 295 ESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISAC 354

Query: 89  GCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             L     G+Q H   +KS   +  ++V+ +LV +Y +  N++D R++F  M + N V+ 
Sbjct: 355 SNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTL 414

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
            S+++GYA++ +    L LF +M    I P S T  ++L   A  G V    +   M+
Sbjct: 415 NSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMM 472


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/707 (35%), Positives = 398/707 (56%), Gaps = 41/707 (5%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M  +G    S  +  +L    + G +  A  +H  ++K G      V  +L+++Y++   
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            RDAR +FDGM D++ +TW +++ G+  N     A E F  M   G   +  T   ++  
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C+  + + L +Q+H   +K G D   ++   L   Y K G +E   + F    + K+V++
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPD-KNVIT 245

Query: 350 WTAMISGHLQN-GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           WT MIS   ++   +DL ++ F  M   GV PN FT + +++   A        QV A  
Sbjct: 246 WTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFC 305

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG-- 462
            K   E +  V  + +  Y++KG  DEA ++FE +D   I+ W+AM++GYAQI D+    
Sbjct: 306 YKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDD 365

Query: 463 ---------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
                    A+K++R L    +KP+ FTFSS+++ C+A   A+EQG+Q HA +IK    +
Sbjct: 366 LHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSA-MMALEQGEQIHANTIKTGCLS 424

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V+SALV MY+K G+IE A++ F     R  V+W SMI GY+QHG ++ A+++F++M 
Sbjct: 425 DVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMV 484

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
                 + ITF+ +++AC++AGLV+E ++YFD+M NE+HI P ++HY CMVD++ R G L
Sbjct: 485 LSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRL 544

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
           + A   I R  F  +  +W +++A C              RL+ L+P     YVLL NMY
Sbjct: 545 DDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMY 604

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
            +TG W++ ARVRKL     V      SWI +++K Y F A D++HPQ+ ++Y  LE L 
Sbjct: 605 ISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLL 664

Query: 740 TRLKDAGYK-----PDTSYVLQDIDDEHKEA----ILSQHSERLAIAFGLVATPAGAPLQ 790
            + K  GY+     P+  +  ++ DD+   A    ++  HSERLA+A GL+ TP GA ++
Sbjct: 665 EKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVR 724

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           + KN+ +C DCH+ IK  S L  R+IVVRD+ R H FK+G CSCGD+
Sbjct: 725 VTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 249/487 (51%), Gaps = 18/487 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R +H   VK+G A D+ V+TSLV++YMR  +  D RR+FD M + NVV+WT+L++G+  
Sbjct: 95  ARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTL 154

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      LE+F  M   G  P+ +T   +L   +    +    QVH   IK G + +TS+
Sbjct: 155 NSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSM 214

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME-AFETFNNMGLAG 275
            N+L  +Y KS  +      F G  D++ ITW +M++    +E +++     F +M   G
Sbjct: 215 GNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGG 274

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 T  SV+ LC    ++ L +Q+ +   K G + +  ++   M  Y + G+ ++A 
Sbjct: 275 VMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAM 334

Query: 336 KIFSMMREMKDVVSWTAMISGHLQ---NGAIDL--------AVNFFCQMTREGVRPNGFT 384
           ++F  M +   +++W AMISG+ Q   +   DL        A+  F  + R  ++P+ FT
Sbjct: 335 RLFEEM-DSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFT 393

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +S IL+   A+       Q+HA+ IKT       V +AL+N Y K G ++ A K F  + 
Sbjct: 394 FSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMP 453

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            +  V W++M++GY+Q G ++ A++++  +   G +PNE TF S+++AC+      E  +
Sbjct: 454 TRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAER 513

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
            F     +  +   +     +V M+ + G ++ A    KR   + +   W+S++ G   H
Sbjct: 514 YFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSH 573

Query: 560 GHTKKAL 566
           G+ + A 
Sbjct: 574 GNMELAF 580



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 222/479 (46%), Gaps = 52/479 (10%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S+  + LFD  P +N V +  L+  +  +S    AL +F+ +  LG      TL  +L  
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C        G+QVH   +K G     ++  SL  LY ++ ++E G R F    + NV++W
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITW 246

Query: 148 TSLLSGYARNK-MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           T+++S  A ++   D  L LF  M   G+ PN FT ++V+ +      ++   QV     
Sbjct: 247 TTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCY 306

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY------VTNEL 260
           K G E    V N+ + +YL+     +A  +F+ M+    ITWN+M++GY        ++L
Sbjct: 307 KVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDL 366

Query: 261 H-----MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           H      +A + F ++  +  +    TF S++ +C+    L    Q+H+  +K G   D 
Sbjct: 367 HARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDV 426

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y+KCG +E A+K F  M   +  V+WT+MISG+ Q+G    A+  F  M  
Sbjct: 427 VVNSALVNMYNKCGSIECATKAFVEM-PTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVL 485

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            G RPN  T+                                +LL+A    G+++EA + 
Sbjct: 486 SGARPNEITF-------------------------------VSLLSACSYAGLVEEAERY 514

Query: 436 FELID-----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           F+++      E  +  +  M+  + ++G  + A    ++    G +PNE  +SS++  C
Sbjct: 515 FDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKR---TGFEPNEAIWSSLVAGC 570



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 194/429 (45%), Gaps = 57/429 (13%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQE-ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           F  +P +N + +  ++     D  + +  L+LFL +   G+     TL+SV+  CG   D
Sbjct: 235 FKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLD 294

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+QV   C K G   ++ V  S + LY+R    ++  R+F++M+ S++++W +++SG
Sbjct: 295 MSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISG 354

Query: 154 Y------ARNKMNDR-----VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           Y      A++ ++ R      L+LF  +    +KP+ FTFS++L V +    +    Q+H
Sbjct: 355 YAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIH 414

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
              IK G      V +AL++MY K   +  A   F  M  R  +TW SM++GY  +    
Sbjct: 415 ANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQ 474

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +A + F +M L+GA     TFVS++  C                                
Sbjct: 475 DAIQLFEDMVLSGARPNEITFVSLLSAC-------------------------------- 502

Query: 323 VAYSKCGKMEDASKIFSMMR---EMKDVVS-WTAMISGHLQNGAIDLAVNFFCQMTREGV 378
              S  G +E+A + F MMR    ++ +V  +  M+   ++ G +D A +F   + R G 
Sbjct: 503 ---SYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSF---IKRTGF 556

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE---KSFSVGTALLNAYVKKGILDEAAKV 435
            PN   +S ++    +    ++  +      E   K       LLN Y+  G   + A+V
Sbjct: 557 EPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARV 616

Query: 436 FELIDEKDI 444
            +L   +D+
Sbjct: 617 RKLAKHEDV 625


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 262/755 (34%), Positives = 418/755 (55%), Gaps = 24/755 (3%)

Query: 85  LKTCGCLFDHVFGRQVHCECVK-SGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           L+ C    D   GR VH   V+  G  R D+  +  L+++Y +   +   RR+FD M E 
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           N+VS+ +L+  +A+    +    LF R++ EG + N F  +T+L +         A  VH
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           +   K G +    V + LI  Y    +V DA  VF+G+  +D++ W +MV+ Y  N+   
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            AF  F+ M ++G +       SV+K       + L + +H   +K   D + ++   L+
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+KCG ++DA   F M+    DV+  + MIS + Q+   + A   F ++ R  V PN 
Sbjct: 306 DMYAKCGDIKDARLAFEMI-PYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNE 364

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           ++ S +L A   +       Q+H H IK  +E    VG AL++ Y K   +D + K+F  
Sbjct: 365 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           + + + V+W+ ++ G++Q G  E A+ ++ ++ +  +   + T+SSV+ AC A +A++  
Sbjct: 425 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC-ASTASIRH 483

Query: 499 GKQFHACSI-KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
             Q H CSI K+  NN   + ++L+  Y+K G I  A +VF+   +RD++SWN++I GYA
Sbjct: 484 AGQIH-CSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
            HG    ALE+F  M + ++E + ITF+ +++ C+  GLV+ G   FD M  +H I P+M
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLIS 663
           EHY+C+V L  RAG L  A+  I  +P A SA VWR +L++C              +++ 
Sbjct: 603 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE 662

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           ++P D   YVLLSNMYAA G   + A +RK M +  V+K  G SW+E+K + ++F  G +
Sbjct: 663 IEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 722

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
            HP    I + LE L+ +    GY PD + VL D+D E K  +L  HSERLA+A+GLV T
Sbjct: 723 DHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMT 782

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           P G P++I+KNLR C DCHT   +ISK+ +R+I+V
Sbjct: 783 PPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 247/505 (48%), Gaps = 5/505 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFDR P+RN V +  L+  + +    + A  LF  +R  G  +    L+++LK    +  
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                 VH    K G   +  V + L+D Y   + V D   VF+ +   + V WT+++S 
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y+ N   +    +F +M+V G KPN F  ++VL        V     +H   IK   +  
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  AL+ MY K   ++DAR  F+ +   D I  + M++ Y  +  + +AFE F  +  
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +       +  SV++ C    +L   +Q+H+  +K G + D  +   LM  Y+KC  M+ 
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDS 417

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           + KIFS +R+  + VSW  ++ G  Q+G  + A++ FC+M    +     TYS +L A  
Sbjct: 418 SLKIFSSLRDANE-VSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACA 476

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           + +      Q+H  I K+ +     +G +L++ Y K G + +A KVF+ + E+DI++W+A
Sbjct: 477 STASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNA 536

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +++GYA  G    A++++ ++    V+ N+ TF ++++ C++          F +  I  
Sbjct: 537 IISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDH 596

Query: 510 KLNNALCVSSALVTMYSKKGNIESA 534
            +  ++   + +V +  + G +  A
Sbjct: 597 GIKPSMEHYTCIVRLLGRAGRLNDA 621



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 187/359 (52%), Gaps = 1/359 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+   +++ V +  ++  Y  +   + A  +F  +R  G       L+SVLK   CL
Sbjct: 217 EHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCL 276

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              V G+ +H   +K+    + +V  +L+D+Y +  +++D R  F+ +   +V+  + ++
Sbjct: 277 PSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMI 336

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S YA++  N++  ELF R+    + PN ++ S+VL    +   +    Q+H   IK G E
Sbjct: 337 SRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHE 396

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NAL+  Y K   +  +  +F  + D + ++WN++V G+  + L  EA   F  M
Sbjct: 397 SDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEM 456

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             A    T+ T+ SV++ CA+T  +R A Q+H  + K+  + D  I   L+  Y+KCG +
Sbjct: 457 QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYI 516

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            DA K+F  + E +D++SW A+ISG+  +G    A+  F +M +  V  N  T+  +L+
Sbjct: 517 RDALKVFQHLME-RDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLS 574



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 170/333 (51%), Gaps = 12/333 (3%)

Query: 30  KDQSL-FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           KD  L F+  P  + +  + ++  Y + + +++A  LFL + R  +     +LSSVL+ C
Sbjct: 315 KDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 374

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +    FG+Q+H   +K G   D+ V  +L+D Y + N+++   ++F  + ++N VSW 
Sbjct: 375 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWN 434

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ G++++ + +  L +F  MQ   +     T+S+VL   A    +  A Q+H  + K+
Sbjct: 435 TIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKS 494

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                T + N+LI  Y K   +RDA  VF  + +RD I+WN++++GY  +    +A E F
Sbjct: 495 TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF 554

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR------TGLM 322
           + M  +  E    TFV+++ +C++T  +      H   L + +  DH I+      T ++
Sbjct: 555 DRMNKSNVESNDITFVALLSVCSSTGLVN-----HGLSLFDSMRIDHGIKPSMEHYTCIV 609

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               + G++ DA +    +      + W A++S
Sbjct: 610 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 642


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/854 (31%), Positives = 441/854 (51%), Gaps = 91/854 (10%)

Query: 41  RNFVEYNRLLFEYCR---DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           RN++ +N  L E+     DS   E L +F  +   G+      L+ VLK C  L +   G
Sbjct: 93  RNYLLWNSFLEEFASFGGDS--HEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLG 150

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
            +VH   +K GF  DV++S +L++LY +   ++   +VFD+        W +++    R+
Sbjct: 151 MEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRS 210

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
           +  +  LEL  RMQ    K    T   +L        +    Q+H  VI+ G    TS+C
Sbjct: 211 ERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSIC 270

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM------ 271
           N+++SMY ++  +  ARAVFD  ED +  +WNS+++ Y  N     A++ F  M      
Sbjct: 271 NSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIK 330

Query: 272 -------GLAGAELTRSTFVSVI-------------KLCATTKELR---------LARQL 302
                   L    L + ++ +V+               C+ T  L+         L +++
Sbjct: 331 PDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEI 390

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H  ++++ +++D  + T L+  Y K   +E A  +F   +  K++ +W ++ISG+   G 
Sbjct: 391 HGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKN-KNICAWNSLISGYTYKGL 449

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNA 422
            D A     QM  EG++ +  T++                               +L++ 
Sbjct: 450 FDNAEKLLIQMKEEGIKADLVTWN-------------------------------SLVSG 478

Query: 423 YVKKGILDEAAKVFELIDE----KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           Y   G  +EA  V   I       ++V+W+AM++G  Q  +   A++ + Q+  E VKPN
Sbjct: 479 YSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPN 538

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
             T S+++ AC  PS  +++G++ H  S+K    + + +++AL+ MYSK G ++ A EVF
Sbjct: 539 STTISTLLRACAGPSL-LKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVF 597

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
           +  +++ L  WN M+ GYA +GH ++   +F  M +  +  D ITF  +++ C ++GLV 
Sbjct: 598 RNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVM 657

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +G +YFD M  ++ I PT+EHYSCMVDL  +AG L++A+D I+ MP  A A++W  VLAA
Sbjct: 658 DGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAA 717

Query: 659 CRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           CRL                L+P++SA YVL+ N+Y+    W +  R+++ M    VK   
Sbjct: 718 CRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPN 777

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
            +SWI+V+   + F     SHP+  +IY  L +L + +K  GY PDT+ V Q+IDD  KE
Sbjct: 778 VWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKE 837

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
            +L  H+E+LA+ +GL+    G P+++VKN R+C DCHT  K IS    R+I +RD  RF
Sbjct: 838 KVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRF 897

Query: 825 HHFKEGLCSCGDYW 838
           HHF  G CSC D W
Sbjct: 898 HHFMNGECSCNDRW 911



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/575 (25%), Positives = 252/575 (43%), Gaps = 78/575 (13%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD +P +    +N ++    R    ++AL L   ++         T+  +L+ CG L  
Sbjct: 188 VFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRA 247

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   ++ G   + ++  S+V +Y R N +E  R VFD   + N+ SW S++S 
Sbjct: 248 LNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISS 307

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL----------------------GVLAD 191
           YA N   +   +LF  M+   IKP+  T++++L                      G   D
Sbjct: 308 YAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPD 367

Query: 192 EGIVATAVQ-------------VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
              + +A+Q             +H  ++++  E    VC +L+ MY+K+  +  A  VF 
Sbjct: 368 SCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFH 427

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
             ++++   WNS+++GY    L       F+N                            
Sbjct: 428 HTKNKNICAWNSLISGYTYKGL-------FDN---------------------------- 452

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM---KDVVSWTAMIS 355
           A +L  Q+ + GI  D      L+  YS  G  E+A  + + ++ +    +VVSWTAMIS
Sbjct: 453 AEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMIS 512

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
           G  QN     A+ FF QM  E V+PN  T S +L A    S      ++H   +K  +  
Sbjct: 513 GCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVD 572

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              + TAL++ Y K G L  A +VF  I EK +  W+ M+ GYA  G  E    ++  + 
Sbjct: 573 DIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMC 632

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
             G++P+  TF+++++ C      ++  K F +      +N  +   S +V +  K G +
Sbjct: 633 KTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFL 692

Query: 532 ESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           + A + +    +K D   W +++     H   K A
Sbjct: 693 DEALDFIHAMPQKADASIWGAVLAACRLHKDIKIA 727



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/625 (22%), Positives = 275/625 (44%), Gaps = 85/625 (13%)

Query: 98  RQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           R++H + +K     + V +  S++  Y+   + E   +VF      N + W S L  +A 
Sbjct: 48  RELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFAS 107

Query: 157 -NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
               +  +LE+F  +  +G+K +S   + VL +      +   ++VH  ++K G +V   
Sbjct: 108 FGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVH 167

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           +  ALI++Y K   +  A  VFD    ++   WN++V   + +E   +A E    M  A 
Sbjct: 168 LSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSAS 227

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           A+ T  T V +++ C   + L   +Q+H  V++ G   + +I   ++  YS+  ++E A 
Sbjct: 228 AKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELAR 287

Query: 336 KIF----------------------------SMMREMK------DVVSWTAMISGHLQNG 361
            +F                             + REM+      D+++W +++SGHL  G
Sbjct: 288 AVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQG 347

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGT 417
           + +  +     +   G +P+  + +  L A   +  F    ++H +I+++  E    V T
Sbjct: 348 SYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCT 407

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           +L++ Y+K   L++A  VF     K+I AW+++++GY   G  + A K+  Q+  EG+K 
Sbjct: 408 SLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKA 467

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           +  T++S                                    LV+ YS  G  E A  V
Sbjct: 468 DLVTWNS------------------------------------LVSGYSMSGCSEEALAV 491

Query: 538 FKRQRKRDL----VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
             R +   L    VSW +MI G  Q+ +   AL+ F +M+ ++++ +  T   ++ AC  
Sbjct: 492 INRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAG 551

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
             L+ +G++       +H     +   + ++D+YS+ G L+ A ++   +    +   W 
Sbjct: 552 PSLLKKGEE-IHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIK-EKTLPCWN 609

Query: 654 TVLAACRLISLQPHDSAIYVLLSNM 678
            ++      ++  H   ++ L  NM
Sbjct: 610 CMMMG---YAIYGHGEEVFTLFDNM 631



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 198/467 (42%), Gaps = 81/467 (17%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF------------------------- 66
           +++FD +   N   +N ++  Y  +     A +LF                         
Sbjct: 287 RAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQ 346

Query: 67  -------LGIRRL---GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVS 116
                    IR L   G      +++S L+    L     G+++H   ++S    DV V 
Sbjct: 347 GSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVC 406

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           TSLVD+Y++ + +E    VF      N+ +W SL+SGY    + D   +L  +M+ EGIK
Sbjct: 407 TSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIK 466

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
            +  T+                                   N+L+S Y  S    +A AV
Sbjct: 467 ADLVTW-----------------------------------NSLVSGYSMSGCSEEALAV 491

Query: 237 FDGMED----RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
            + ++      + ++W +M++G   NE + +A + F+ M     +   +T  ++++ CA 
Sbjct: 492 INRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAG 551

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              L+   ++H   +K+G   D  I T L+  YSK GK++ A ++F  ++E K +  W  
Sbjct: 552 PSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKE-KTLPCWNC 610

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNY 409
           M+ G+   G  +     F  M + G+RP+  T++ +L+       V     +   +KT+Y
Sbjct: 611 MMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDY 670

Query: 410 EKSFSVG--TALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAG 453
             + ++   + +++   K G LDEA      + +K D   W A+LA 
Sbjct: 671 SINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAA 717



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 79/377 (20%), Positives = 163/377 (43%), Gaps = 51/377 (13%)

Query: 391 AQPAVSPF--------------QVHAHIIKTNYEKSF-SVGTALLNAYVKKGILDEAAKV 435
           + P  SPF              ++HA +IK   + +  ++  +++  Y++ G  + A KV
Sbjct: 27  SSPKFSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDFESATKV 86

Query: 436 FELIDEKDIVAWSAMLAGYAQI-GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           F +   ++ + W++ L  +A   GD+   ++++++L  +GVK +    + V+  C A   
Sbjct: 87  FFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLAL-M 145

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +  G + HAC +K      + +S AL+ +Y K   I+ A++VF     ++   WN+++ 
Sbjct: 146 ELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVM 205

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
              +    + ALE+ + M+    +    T + ++ AC     ++EG+Q    ++    + 
Sbjct: 206 ANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVS 265

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVL 674
            T    S +V +YSR   LE A  + +                     S + H+ A +  
Sbjct: 266 NTSICNS-IVSMYSRNNRLELARAVFD---------------------STEDHNLASWNS 303

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           + + YA  G       + + M    +K +   +W        S L+G +       + + 
Sbjct: 304 IISSYAVNGCLNGAWDLFREMESSSIKPDI-ITW-------NSLLSGHLLQGSYENVLTN 355

Query: 735 LEELSTRLKDAGYKPDT 751
           +  L +    AG+KPD+
Sbjct: 356 IRSLQS----AGFKPDS 368


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/750 (35%), Positives = 406/750 (54%), Gaps = 72/750 (9%)

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           +S F+    ++   +  + R   ++  R +FDD+    V SW ++++GY  NK      +
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           LF +M      P   T S                                  N L+S Y+
Sbjct: 69  LFDKM------PERNTIS---------------------------------WNGLVSGYV 89

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K+ M+ +AR VFD M +R+ ++W SMV GYV   L  EA   F  M        ++    
Sbjct: 90  KNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP------EKNVVSW 143

Query: 286 VIKLCATTKELRL--ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
            + L    ++ R+  AR+L   +    +    N+  GL       G++ +A +IF  M +
Sbjct: 144 TVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSE----GRLSEAREIFDEMPQ 199

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAH 403
            ++VV+WT+MISG+  N  +D+A   F  M  +    N  T++ +L            A 
Sbjct: 200 -RNVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAMLKGYTRSGRINEAAE 254

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           + K    K  +    ++  +   G + +A  VF+ + EKD   WSA++  Y + G    A
Sbjct: 255 LFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEA 314

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           + ++  +  EGV+PN  +  S+++ C +  A+++ G+Q H+  +++  +  + VSS L+T
Sbjct: 315 LALFSLMQREGVRPNFPSIISILSVCGS-LASLDHGRQVHSQLVRSHFDLDIYVSSVLIT 373

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY K G++ +   VF R   +D+V WNS+I GYAQHG  +KALEVF EM       D IT
Sbjct: 374 MYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEIT 433

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           FIGV++AC + G V EG + F+ M +++ +    EHY+CMVDL  RAG L +AM++I  M
Sbjct: 434 FIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENM 493

Query: 644 PFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERA 689
           P  A A VW  +L+ACR              L+ L+P  +  Y+LLSN+YA+   W++ A
Sbjct: 494 PVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVA 553

Query: 690 RVRKLMNDRKVKKEAGYSWIEVKNKTYSFL-AGDISHPQSNQIYSKLEELSTRLKDAGYK 748
            +RK M  R V K  G SWIEV NK + F   G  SHP+   I  KLE+L   L++AGY 
Sbjct: 554 ELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYC 613

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
           PD S+V+ D+D+E K   L  HSE++A+A+GL+  P G P++++KNLRVCGDCH+ IKLI
Sbjct: 614 PDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGDCHSAIKLI 673

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +++  R+I++RD NRFHHFK+GLCSC D+W
Sbjct: 674 AQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 150/337 (44%), Gaps = 11/337 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  PQRN V +  ++  Y  ++    A  LF  +       + + L    ++    
Sbjct: 191 REIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRS---- 246

Query: 92  FDHVFGR-QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                GR     E  K+   + V     ++  +     V   R VFD M E +  +W++L
Sbjct: 247 -----GRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSAL 301

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +  Y R       L LF  MQ EG++PN  +  ++L V      +    QVH+ ++++  
Sbjct: 302 IKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHF 361

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           ++   V + LI+MY+K   +   + VFD    +D + WNS++AGY  +    +A E F+ 
Sbjct: 362 DLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHE 421

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           M  +GA     TF+ V+  C  T +++   ++  S   K  +D        ++    + G
Sbjct: 422 MFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAG 481

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           K+ +A  +   M    D + W A++S    +  +DLA
Sbjct: 482 KLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLA 518



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 126/233 (54%), Gaps = 4/233 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKTC 88
           K + +FD+  +++   ++ L+  Y R     EAL LF  ++R G+ P F S +S +L  C
Sbjct: 282 KARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIIS-ILSVC 340

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L     GRQVH + V+S F  D+ VS+ L+ +Y++  ++  G+RVFD  +  ++V W 
Sbjct: 341 GSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWN 400

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIK 207
           S+++GYA++   ++ LE+FH M   G  P+  TF  VL      G V   +++  +M  K
Sbjct: 401 SIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSK 460

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNE 259
              +  T     ++ +  ++  + +A  + + M  + D+I W ++++   T++
Sbjct: 461 YQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHK 513



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/158 (19%), Positives = 79/158 (50%), Gaps = 10/158 (6%)

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           +F     ++  +++  ++   ++ +++ G I+ A  +F   + + + SWN+++ GY  + 
Sbjct: 2   RFRLIPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNK 61

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
              +A ++F +M     E + I++ G+++     G++ E ++ FD M   + +      +
Sbjct: 62  RPAEAQKLFDKMP----ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVV-----SW 112

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           + MV  Y + G++++A  +  RMP   +   W  +L  
Sbjct: 113 TSMVRGYVQEGLIDEAELLFWRMP-EKNVVSWTVMLGG 149


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/695 (35%), Positives = 410/695 (58%), Gaps = 33/695 (4%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G +  S  +  +L    D  +   A  +H  ++K G      V   L+++Y K  ++  A
Sbjct: 59  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             VFD +  R+   W +++ GYV N   + A + F  M  AGA  +  T   V+  C++ 
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           + +   +Q+H+ ++K  IDFD +I   L   YSK  ++E A K F +++E KDV+SWT++
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE-KDVISWTSV 237

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           IS    NG    +++FF  M  +G++PN +T + +L+A   +       Q+H+  IK  Y
Sbjct: 238 ISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGY 297

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT--------- 460
             S  +  +++  Y+K G L EA K+FE ++  ++V W+AM+AG+A++ D          
Sbjct: 298 GSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHK 357

Query: 461 --EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A+ ++++L   G+KP+ FTFSSV++ C+    A+EQG+Q H   IK+ +   + V 
Sbjct: 358 SGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNL-VALEQGEQIHGQIIKSGVLADVVVG 416

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +ALV+MY+K G+I+ AS+ F     R ++SW SMI G+A+HG +++AL++F++MR   ++
Sbjct: 417 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 476

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            + +TF+GV++AC+HAGL DE   YF++M  +++I P M+H++C++D+Y R G +E+A D
Sbjct: 477 PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFD 536

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           ++++M F  + T+W  ++A CR              L+ L+P D   YV L NM+ + G 
Sbjct: 537 VVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGR 596

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W++ ++VRKLM + KV K   +SWI +K K YSF   D SH QS ++Y  LE +   +K 
Sbjct: 597 WKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKA 656

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQ--HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
            GY+P     + + ++  +  + S   HSE+LAIAFGL+  P   P+++VK++ +C DCH
Sbjct: 657 LGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCH 716

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
             I+ IS L+ R+IV+RD+ + H F  G CSCG Y
Sbjct: 717 NFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 265/520 (50%), Gaps = 28/520 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R +H   VK+GF  D+ V T LV++Y +   +E   +VFD++   NV +WT+LL+GY +
Sbjct: 83  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      L+LF +M   G  P+++T   VL   +    +    QVH  +IK   +  TS+
Sbjct: 143 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 202

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+L S Y K + +  A   F  ++++D I+W S+++    N     +   F +M   G 
Sbjct: 203 GNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGM 262

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    T  SV+  C     L L  Q+HS  +K G      I+  +M  Y KCG + +A K
Sbjct: 263 KPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQK 322

Query: 337 IFSMMREMKDVVSWTAMISGHL-------------QNGAIDLAVNFFCQMTREGVRPNGF 383
           +F  M E  ++V+W AMI+GH              ++G+  LA+  F ++ R G++P+ F
Sbjct: 323 LFEGM-ETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAM--FQKLYRSGMKPDLF 379

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T+S +L+    +       Q+H  IIK+       VGTAL++ Y K G +D+A+K F  +
Sbjct: 380 TFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEM 439

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             + +++W++M+ G+A+ G ++ A++++  +   G+KPN+ TF  V++AC+    A E  
Sbjct: 440 PSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEAL 499

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF-KRQRKRDLVSWNSMICGYAQ 558
             F     +  +   +   + L+ MY + G +E A +V  K   + +   W+ +I G   
Sbjct: 500 YYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRS 559

Query: 559 HGHTK---KALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           HG +     A E   +++ +D+E    T++ ++     AG
Sbjct: 560 HGKSDLGFYAAEQLLKLKPKDVE----TYVSLLNMHISAG 595



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 232/474 (48%), Gaps = 25/474 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P+RN   +  LL  Y ++S    AL LF+ +   G      TL  VL  C  L  
Sbjct: 121 VFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQS 180

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG+QVH   +K     D ++  SL   Y +   +E   + F  + E +V+SWTS++S 
Sbjct: 181 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISS 240

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              N    R L  F  M  +G+KPN +T ++VL        +    Q+H++ IK G    
Sbjct: 241 CCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS 300

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY-----------VTNELHM 262
             + N+++ +YLK   + +A+ +F+GME  + +TWN+M+AG+             ++   
Sbjct: 301 ILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGS 360

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            A   F  +  +G +    TF SV+ +C+    L    Q+H Q++K+G+  D  + T L+
Sbjct: 361 TALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALV 420

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+KCG ++ ASK F  M   + ++SWT+MI+G  ++G    A+  F  M   G++PN 
Sbjct: 421 SMYNKCGSIDKASKAFLEMPS-RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 479

Query: 383 FTYSIILT-------AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            T+  +L+       A  A+  F++     + N +        L++ Y++ G ++EA  V
Sbjct: 480 VTFVGVLSACSHAGLADEALYYFELMQK--QYNIKPVMDHFACLIDMYLRLGRVEEAFDV 537

Query: 436 FELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF-TFSSVIN 487
              ++ E +   WS ++AG    G ++       QL    +KP +  T+ S++N
Sbjct: 538 VHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLLN 589



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC- 88
           K    F   P R  + +  ++  + R  L Q+AL LF  +R +G+     T   VL  C 
Sbjct: 431 KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS 490

Query: 89  -------GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN- 140
                     +  +  +Q + + V   FA        L+D+Y+R   VE+   V   MN 
Sbjct: 491 HAGLADEALYYFELMQKQYNIKPVMDHFA-------CLIDMYLRLGRVEEAFDVVHKMNF 543

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           E N   W+ L++G   +  +D  L  +   Q+  +KP
Sbjct: 544 EPNETIWSMLIAGCRSHGKSD--LGFYAAEQLLKLKP 578


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/647 (39%), Positives = 381/647 (58%), Gaps = 29/647 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LI+ Y K  ++  AR VFD +   D +++N+++A Y        A   F  +      
Sbjct: 79  NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L   T   VI  C    ++ L RQLH  V+  G D   ++   ++  YS+ G + +A ++
Sbjct: 139 LDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRV 196

Query: 338 FSMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---- 391
           F  M E   +D VSW AMI    Q+     AV  F +M R G++ + FT + +LTA    
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCV 256

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAM 450
           +  V   Q H  +IK+ +  +  VG+ L++ Y K  G + E  KVFE I   D+V W+ M
Sbjct: 257 KDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTM 316

Query: 451 LAGYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++G++Q  D +E  +  +R++   G  P++ +F  V +AC+  S+    GKQ HA +IK+
Sbjct: 317 ISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSP-SVGKQVHALAIKS 375

Query: 510 KLN-NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            +  N + V++ALV MYSK GN+  A  VF    + ++VS NSMI GYAQHG   ++L +
Sbjct: 376 DIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRL 435

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M ++D+  + ITFI V++AC H G V+EGQ+YF++M     I P  EHYSCM+DL  
Sbjct: 436 FELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLG 495

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG L++A  II  MPF   +  W T+L ACR               + L+P+++A YV+
Sbjct: 496 RAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVM 555

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSNMYA+   W+E A V++LM +R VKK+ G SWIE+  K + F+A D SHP   +I+  
Sbjct: 556 LSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVY 615

Query: 735 LEELSTRLKDAGYKPDTSYVL---QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           + E+  ++K AGY PD  + L   ++++ + KE  L  HSE+LA+AFGL++T    P+ +
Sbjct: 616 MGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILV 675

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VKNLR+CGDCH  IKLIS +  R+I VRDT+RFH FKEG CSCGDYW
Sbjct: 676 VKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 220/447 (49%), Gaps = 17/447 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  PQ + V YN L+  Y      + AL LF  +R L   L G TLS V+  CG  
Sbjct: 95  RQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACG-- 152

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES---NVVSWT 148
            D    RQ+HC  V  G+    +V+ +++  Y R   + + RRVF +M E    + VSW 
Sbjct: 153 DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWN 212

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++    +++     +ELF  M   G+K + FT ++VL        +   +Q H M+IK+
Sbjct: 213 AMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKS 272

Query: 209 GGEVVTSVCNALISMYLK--SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE-LHMEAF 265
           G    + V + LI +Y K    MV + R VF+ +   D + WN+M++G+   E L  +  
Sbjct: 273 GFHGNSHVGSGLIDLYSKCAGGMV-ECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGI 331

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVA 324
             F  M   G      +FV V   C+      + +Q+H+  +K+ I ++  ++   L+  
Sbjct: 332 WCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAM 391

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           YSKCG + DA ++F  M E  ++VS  +MI+G+ Q+G    ++  F  M ++ + PN  T
Sbjct: 392 YSKCGNVHDARRVFDTMPE-HNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTIT 450

Query: 385 YSIILTA---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           +  +L+A      V   Q + +++K  +  E      + +++   + G L EA ++ E +
Sbjct: 451 FIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETM 510

Query: 440 D-EKDIVAWSAMLAGYAQIGDTEGAVK 465
                 + W+ +L    + G+ E AVK
Sbjct: 511 PFNPGSIEWATLLGACRKHGNVELAVK 537



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 248/543 (45%), Gaps = 51/543 (9%)

Query: 74  LPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGR 133
            PL   T  ++LK C    D + G+ +H    KS       +S     LY +  ++ + +
Sbjct: 5   FPLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQ 64

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
             FD     NV S+ +L++ YA++ +     ++F  +     +P+  +++T++   AD G
Sbjct: 65  TSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIP----QPDIVSYNTLIAAYADRG 120

Query: 194 IVATAV---------------------------------QVHTMVIKNGGEVVTSVCNAL 220
               A+                                 Q+H  V+  G +   SV NA+
Sbjct: 121 ECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFVVVCGYDCYASVNNAV 180

Query: 221 ISMYLKSKMVRDARAVFDGMED---RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           ++ Y +   + +AR VF  M +   RD ++WN+M+     +   +EA E F  M   G +
Sbjct: 181 LACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLK 240

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKMEDASK 336
           +   T  SV+      K+L    Q H  ++K+G   + ++ +GL+  YSKC G M +  K
Sbjct: 241 VDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRK 300

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAI-DLAVNFFCQMTREGVRPNGFTYSIILTA---- 391
           +F  +    D+V W  MISG  Q   + +  +  F +M   G  P+  ++  + +A    
Sbjct: 301 VFEEI-AAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNL 359

Query: 392 -QPAVSPFQVHAHIIKTNYE-KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             P+V   QVHA  IK++      SV  AL+  Y K G + +A +VF+ + E ++V+ ++
Sbjct: 360 SSPSVGK-QVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNS 418

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+AGYAQ G    +++++  +  + + PN  TF +V++AC       E  K F+    + 
Sbjct: 419 MIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERF 478

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
           ++       S ++ +  + G ++ A  + +        + W +++    +HG+ + A++ 
Sbjct: 479 RIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKA 538

Query: 569 FKE 571
             E
Sbjct: 539 ANE 541



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 174/347 (50%), Gaps = 7/347 (2%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQV 100
           R+ V +N ++    +     EA+ LF  + R GL +   T++SVL    C+ D V G Q 
Sbjct: 206 RDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQF 265

Query: 101 HCECVKSGFARDVNVSTSLVDLYMR-TNNVEDGRRVFDDMNESNVVSWTSLLSGYAR-NK 158
           H   +KSGF  + +V + L+DLY +    + + R+VF+++   ++V W +++SG+++   
Sbjct: 266 HGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYED 325

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV-VTSVC 217
           +++  +  F  MQ  G  P+  +F  V    ++    +   QVH + IK+       SV 
Sbjct: 326 LSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVN 385

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NAL++MY K   V DAR VFD M + + ++ NSM+AGY  + + +E+   F  M      
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIA 445

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASK 336
               TF++V+  C  T ++   ++  + + +   I+ +    + ++    + GK+++A +
Sbjct: 446 PNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAER 505

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAV---NFFCQMTREGVRP 380
           I   M      + W  ++    ++G ++LAV   N F Q+      P
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAP 552



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 39/213 (18%)

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           TF +++ AC A    +  GK  HA   K+ +  +  +S+    +YSK G++ +A   F  
Sbjct: 11  TFRNLLKACIAQRDLI-TGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDL 69

Query: 541 QRKRDLVSWNSMICGYAQH-------------------------------GHTKKALEVF 569
            +  ++ S+N++I  YA+H                               G  + AL +F
Sbjct: 70  TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLF 129

Query: 570 KEMRRQDLEFDGITFIGVITAC-THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
            E+R      DG T  GVI AC    GLV   Q +  ++V  +  Y ++   + ++  YS
Sbjct: 130 AEVRELRFGLDGFTLSGVIIACGDDVGLVR--QLHCFVVVCGYDCYASVN--NAVLACYS 185

Query: 629 RAGMLEKAMDIINRMPFAAS--ATVWRTVLAAC 659
           R G L +A  +   M          W  ++ AC
Sbjct: 186 RKGFLNEARRVFREMGEGGGRDEVSWNAMIVAC 218


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/695 (35%), Positives = 410/695 (58%), Gaps = 33/695 (4%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G +  S  +  +L    D  +   A  +H  ++K G      V   L+++Y K  ++  A
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             VFD +  R+   W +++ GYV N   + A + F  M  AGA  +  T   V+  C++ 
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           + +   +Q+H+ ++K  IDFD +I   L   YSK  ++E A K F +++E KDV+SWT++
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE-KDVISWTSV 231

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           IS    NG    +++FF  M  +G++PN +T + +L+A   +       Q+H+  IK  Y
Sbjct: 232 ISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGY 291

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT--------- 460
             S  +  +++  Y+K G L EA K+FE ++  ++V W+AM+AG+A++ D          
Sbjct: 292 GSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHK 351

Query: 461 --EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A+ ++++L   G+KP+ FTFSSV++ C+    A+EQG+Q H   IK+ +   + V 
Sbjct: 352 SGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNL-VALEQGEQIHGQIIKSGVLADVVVG 410

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +ALV+MY+K G+I+ AS+ F     R ++SW SMI G+A+HG +++AL++F++MR   ++
Sbjct: 411 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 470

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            + +TF+GV++AC+HAGL DE   YF++M  +++I P M+H++C++D+Y R G +E+A D
Sbjct: 471 PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFD 530

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           ++++M F  + T+W  ++A CR              L+ L+P D   YV L NM+ + G 
Sbjct: 531 VVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGR 590

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W++ ++VRKLM + KV K   +SWI +K K YSF   D SH QS ++Y  LE +   +K 
Sbjct: 591 WKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKA 650

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQ--HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
            GY+P     + + ++  +  + S   HSE+LAIAFGL+  P   P+++VK++ +C DCH
Sbjct: 651 LGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCH 710

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
             I+ IS L+ R+IV+RD+ + H F  G CSCG Y
Sbjct: 711 NFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 265/520 (50%), Gaps = 28/520 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R +H   VK+GF  D+ V T LV++Y +   +E   +VFD++   NV +WT+LL+GY +
Sbjct: 77  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      L+LF +M   G  P+++T   VL   +    +    QVH  +IK   +  TS+
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 196

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+L S Y K + +  A   F  ++++D I+W S+++    N     +   F +M   G 
Sbjct: 197 GNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGM 256

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    T  SV+  C     L L  Q+HS  +K G      I+  +M  Y KCG + +A K
Sbjct: 257 KPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQK 316

Query: 337 IFSMMREMKDVVSWTAMISGHL-------------QNGAIDLAVNFFCQMTREGVRPNGF 383
           +F  M E  ++V+W AMI+GH              ++G+  LA+  F ++ R G++P+ F
Sbjct: 317 LFEGM-ETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAM--FQKLYRSGMKPDLF 373

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T+S +L+    +       Q+H  IIK+       VGTAL++ Y K G +D+A+K F  +
Sbjct: 374 TFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEM 433

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             + +++W++M+ G+A+ G ++ A++++  +   G+KPN+ TF  V++AC+    A E  
Sbjct: 434 PSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEAL 493

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF-KRQRKRDLVSWNSMICGYAQ 558
             F     +  +   +   + L+ MY + G +E A +V  K   + +   W+ +I G   
Sbjct: 494 YYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRS 553

Query: 559 HGHTK---KALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           HG +     A E   +++ +D+E    T++ ++     AG
Sbjct: 554 HGKSDLGFYAAEQLLKLKPKDVE----TYVSLLNMHISAG 589



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 232/474 (48%), Gaps = 25/474 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P+RN   +  LL  Y ++S    AL LF+ +   G      TL  VL  C  L  
Sbjct: 115 VFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQS 174

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG+QVH   +K     D ++  SL   Y +   +E   + F  + E +V+SWTS++S 
Sbjct: 175 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISS 234

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              N    R L  F  M  +G+KPN +T ++VL        +    Q+H++ IK G    
Sbjct: 235 CCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS 294

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY-----------VTNELHM 262
             + N+++ +YLK   + +A+ +F+GME  + +TWN+M+AG+             ++   
Sbjct: 295 ILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGS 354

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            A   F  +  +G +    TF SV+ +C+    L    Q+H Q++K+G+  D  + T L+
Sbjct: 355 TALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALV 414

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+KCG ++ ASK F  M   + ++SWT+MI+G  ++G    A+  F  M   G++PN 
Sbjct: 415 SMYNKCGSIDKASKAFLEMPS-RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQ 473

Query: 383 FTYSIILT-------AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            T+  +L+       A  A+  F++     + N +        L++ Y++ G ++EA  V
Sbjct: 474 VTFVGVLSACSHAGLADEALYYFELMQK--QYNIKPVMDHFACLIDMYLRLGRVEEAFDV 531

Query: 436 FELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF-TFSSVIN 487
              ++ E +   WS ++AG    G ++       QL    +KP +  T+ S++N
Sbjct: 532 VHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLLN 583



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 18/157 (11%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC- 88
           K    F   P R  + +  ++  + R  L Q+AL LF  +R +G+     T   VL  C 
Sbjct: 425 KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS 484

Query: 89  -------GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN- 140
                     +  +  +Q + + V   FA        L+D+Y+R   VE+   V   MN 
Sbjct: 485 HAGLADEALYYFELMQKQYNIKPVMDHFA-------CLIDMYLRLGRVEEAFDVVHKMNF 537

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           E N   W+ L++G   +  +D  L  +   Q+  +KP
Sbjct: 538 EPNETIWSMLIAGCRSHGKSD--LGFYAAEQLLKLKP 572


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/688 (38%), Positives = 382/688 (55%), Gaps = 20/688 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K CG L     GR VH +    GF  DV V +SL+  Y     + D R +FD M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              + V W  +L+GY +N   D    +F  M+     PNS TF+ VL V A E ++    
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H +V+ +G E+ + V N L++MY K   + DAR +FD M   D +TWN M++GYV N 
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   F+ M  A  +    TF S + L +    LR  +++H  +++NG+  D  +++
Sbjct: 329 FMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC  +E A KIF   R   D+V  TAMISG++ NG  + A+  F  + +E +R
Sbjct: 389 ALIDIYFKCRDVEMARKIFD-QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 447

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N  T + +L A   ++      ++H HI+K  +  S  VG+A+++ Y K G LD A + 
Sbjct: 448 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 507

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  I +KD V W++M+   +Q G  E A+ ++RQ+   G K +  + S+ ++AC A   A
Sbjct: 508 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC-ANLPA 566

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ HA  ++    + L   SAL+ MYSK GN++ A  VF    +++ VSWNS+I  
Sbjct: 567 LHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAA 626

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HG  K +L +F  M    ++ D +TF+ +I+AC HAG VDEG  YF  M  E  I  
Sbjct: 627 YGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMA 686

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            MEHY+CMVDL+ RAG L +A  +IN MPF+  A VW T+L ACR              L
Sbjct: 687 RMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNL 746

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L P +S  YVLLSN++A  G W+   ++R LM +R V+K  G SWI+V N T+ F+A 
Sbjct: 747 FDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAA 806

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKP 749
           D SHPQS+QIY  L+ L   L+  GY P
Sbjct: 807 DRSHPQSSQIYLLLKNLFLELRKEGYVP 834



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 164/582 (28%), Positives = 287/582 (49%), Gaps = 8/582 (1%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L S+L+TC        GRQ H + + +G   +  + T L+ +Y+      D + +F  + 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
                 W  ++ G+      D  L  + +M   G  P+ +TF  V+        VA    
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH  +   G E+   V ++LI  Y ++  + DAR +FD M  +D + WN M+ GYV N  
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
              A   F  M          TF  V+ +CA+   +    QLH  V+ +G++ D  +   
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG + DA ++F MM +  D+V+W  MISG++QNG +D A   F +M    ++P
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPK-TDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKP 347

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           +  T+S  L      +      ++H +II+        + +AL++ Y K   ++ A K+F
Sbjct: 348 DSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIF 407

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           +     DIV  +AM++GY   G    A++I+R L  E ++ N  T +SV+ AC A  AA+
Sbjct: 408 DQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPAC-AGLAAL 466

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
             GK+ H   +K     +  V SA++ MY+K G ++ A + F     +D V WNSMI   
Sbjct: 467 TLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSC 526

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           +Q+G  ++A+++F++M     ++D ++    ++AC +   +  G++    M+        
Sbjct: 527 SQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM-RGAFRSD 585

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +   S ++D+YS+ G L+ A  + + M    +   W +++AA
Sbjct: 586 LFAESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSIIAA 626



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 283/555 (50%), Gaps = 21/555 (3%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYS+       + LFDR P ++ V +N +L  Y ++     A  +F+ +RR        T
Sbjct: 191 FYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVT 250

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            + VL  C       FG Q+H   V SG   D  V+ +L+ +Y +  ++ D RR+FD M 
Sbjct: 251 FACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP 310

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           ++++V+W  ++SGY +N   D    LFH M    +KP+S TFS+ L +L++   +    +
Sbjct: 311 KTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKE 370

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  +I+NG  +   + +ALI +Y K + V  AR +FD     D +   +M++GYV N +
Sbjct: 371 IHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGM 430

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           +  A E F  +          T  SV+  CA    L L ++LH  +LKNG      + + 
Sbjct: 431 NNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSA 490

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           +M  Y+KCG+++ A + F  + + KD V W +MI+   QNG  + A++ F QM   G + 
Sbjct: 491 IMDMYAKCGRLDLAHQTFIGISD-KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKY 549

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           +  + S  L+A   +       ++HA +++  +       +AL++ Y K G LD A +VF
Sbjct: 550 DCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVF 609

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           + ++EK+ V+W++++A Y   G  + ++ ++  +  +G++P+  TF ++I+AC   +  V
Sbjct: 610 DTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISAC-GHAGQV 668

Query: 497 EQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWN 550
           ++G  +  C      I A++ +  C    +V ++ + G +  A  +        D   W 
Sbjct: 669 DEGIHYFRCMTEELGIMARMEHYAC----MVDLFGRAGRLNEAFGMINSMPFSPDAGVWG 724

Query: 551 SMICGYAQHGHTKKA 565
           +++     HG+ + A
Sbjct: 725 TLLGACRLHGNVELA 739


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/624 (40%), Positives = 369/624 (59%), Gaps = 23/624 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VF+ + +  + T NS++ GY    L  +A   +  M L G +  R TF S+ K C  
Sbjct: 93  ARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV 152

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             E    +QLH    K G   D  I+  LM  YS CG +  A K+F  M   K VVSW  
Sbjct: 153 LCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVN-KSVVSWAT 208

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTN 408
           MI  + Q      A+  F +M    V+PN  T   +LTA    +   +  QVH +I +T 
Sbjct: 209 MIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETG 268

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                 + +AL++ Y K G    A  +F  + EK++  W+ M+ G+ +  D E A+ ++ 
Sbjct: 269 IGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFN 328

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           ++   GVK ++ T +S++ ACT    A+E GK  H    K K+   + + +ALV MY+K 
Sbjct: 329 EMQLSGVKGDKVTMASLLIACTH-LGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC 387

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G+IESA  VF+   ++D+++W ++I G A  G   KALE+F EM+  +++ D ITF+GV+
Sbjct: 388 GSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 447

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC+HAGLV+EG  YF+ M N++ I P++EHY CMVD+  RAG + +A D+I  MP A  
Sbjct: 448 AACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPD 507

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
             V   +L+ACR              LI L P +   YVLLSN+Y++  +W+   ++R+L
Sbjct: 508 YFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMREL 567

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M +R +KK  G S IEV    + F+ GD+SHPQS++IY  L+++  RLK AGY PD S V
Sbjct: 568 MVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEV 627

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L D+D++ KE  LS HSE+LAIAFGL++T  G P+++VKNLRVC DCH+ +K IS++  R
Sbjct: 628 LFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNR 687

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +I+VRD NRFHHF +G CSC D+W
Sbjct: 688 EIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 223/448 (49%), Gaps = 10/448 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDL--YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +Q+H + +++    D   ++ +V       + ++   R VF+ +      +  S++ GY 
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
              +  + +  +  M ++G+ P+ FTF ++       G++    Q+H    K G      
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAY 173

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           + N L++MY     +  AR VFD M ++  ++W +M+  Y   +L  EA + F  M +A 
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 233

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            +    T V+V+  CA +++L  A+Q+H  + + GI F   + + LM  Y KCG    A 
Sbjct: 234 VKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLAR 293

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F+ M E K++  W  MI+GH+++   + A++ F +M   GV+ +  T + +L A   +
Sbjct: 294 DLFNKMPE-KNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHL 352

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              +    +H +I K   E   ++GTAL++ Y K G ++ A +VF+ + EKD++ W+A++
Sbjct: 353 GALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALI 412

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            G A  G    A++++ ++    VKP+  TF  V+ AC+      E    F++   K  +
Sbjct: 413 VGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGI 472

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFK 539
             ++     +V M  + G I  A ++ +
Sbjct: 473 QPSIEHYGCMVDMLGRAGRIAEAEDLIQ 500



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 185/358 (51%), Gaps = 4/358 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F++ P       N ++  Y   +L ++A+  +  +   GL     T  S+ K+CG L +
Sbjct: 96  VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE 155

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+HC   K GFA D  +  +L+++Y     +   R+VFD M   +VVSW +++  
Sbjct: 156 ---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 212

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+  +    ++LF RM++  +KPN  T   VL   A    + TA QVH  + + G    
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T + +AL+ +Y K      AR +F+ M +++   WN M+ G+V +  + EA   FN M L
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQL 332

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +G +  + T  S++  C     L L + LH  + K  I+ D  + T L+  Y+KCG +E 
Sbjct: 333 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 392

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           A ++F  M E KDV++WTA+I G    G    A+  F +M    V+P+  T+  +L A
Sbjct: 393 AMRVFQEMPE-KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAA 449



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 164/369 (44%), Gaps = 24/369 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+   ++ V +  ++  Y +  L  EA+ LF  +    +     TL +VL  C   
Sbjct: 192 RKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARS 251

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D    +QVH    ++G      ++++L+D+Y +       R +F+ M E N+  W  ++
Sbjct: 252 RDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMI 311

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+  +   +  L LF+ MQ+ G+K +  T +++L      G +     +H  + K   E
Sbjct: 312 NGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIE 371

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           V  ++  AL+ MY K   +  A  VF  M ++D +TW +++ G       ++A E F+ M
Sbjct: 372 VDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEM 431

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT-----------G 320
            ++  +    TFV V+  C+           H+ ++  GI + +++             G
Sbjct: 432 QMSEVKPDAITFVGVLAACS-----------HAGLVNEGIAYFNSMPNKYGIQPSIEHYG 480

Query: 321 LMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            MV    + G++ +A  +   M    D      ++S    +G + +A     Q+     +
Sbjct: 481 CMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPK 540

Query: 380 PNGFTYSII 388
            NG TY ++
Sbjct: 541 -NGGTYVLL 548



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 13/251 (5%)

Query: 399 QVHAHIIKTN-YEKSFSVGTAL-LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
           Q+HA +++T  +   FS    +   A    G L  A  VF  I        ++++ GY  
Sbjct: 58  QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTN 117

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
                 A+  Y+ +  +G+ P+ FTF S+  +C      + +GKQ H  S K    +   
Sbjct: 118 KNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC----GVLCEGKQLHCHSTKLGFASDAY 173

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           + + L+ MYS  G + SA +VF +   + +VSW +MI  YAQ     +A+++F+ M    
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 233

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQ---YFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           ++ + IT + V+TAC  +  ++  +Q   Y D      H   T    S ++D+Y + G  
Sbjct: 234 VKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLT----SALMDVYCKCGCY 289

Query: 634 EKAMDIINRMP 644
             A D+ N+MP
Sbjct: 290 PLARDLFNKMP 300


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/631 (39%), Positives = 374/631 (59%), Gaps = 30/631 (4%)

Query: 236 VFDGMEDRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
           +F+   D+ ++ +WNS++A    +   +EA   F++M     +  RSTF   IK C+   
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +L   RQ H Q L  G + D  + + L+  YSKCG++ DA  +F  +   +++VSWT+MI
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISH-RNIVSWTSMI 225

Query: 355 SGHLQNGAIDLAVNFFCQMTRE--GVRPNG------FTYSIILTAQPAVSPFQ----VHA 402
           +G++QN     A+  F +   E  G   +G           +L+A   VS       VH 
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
            +IK  +E    V   L++AY K G L  + +VF+ + E+D+++W++++A YAQ G +  
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345

Query: 463 AVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
           +++I+ ++  +G +  N  T S+V+ AC A S +   GK  H   IK  L + + V +++
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLAC-AHSGSQRLGKCIHDQVIKMGLESNVFVGTSI 404

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + MY K G +E A + F R R++++ SW++M+ GY  HGH K+ALEVF EM    ++ + 
Sbjct: 405 IDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNY 464

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           ITF+ V+ AC+HAGL++EG  +F  M +E  + P +EHY CMVDL  RAG L++A D+I 
Sbjct: 465 ITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIK 524

Query: 642 RMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQE 687
            M       VW  +L ACR              L  L P +   YVLLSN+YA  G W++
Sbjct: 525 GMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWED 584

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
             R+R LM +  + K  G+S +++K + + FL GD  HPQ  +IY  LE+LS +L++ GY
Sbjct: 585 VERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGY 644

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            PD + VL D+  E KE +L  HSE+LA+AFG++ T  G  + I+KNLRVCGDCHT IK 
Sbjct: 645 VPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKF 704

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ISK+  R+IVVRD+ RFHHF++GLCSCGDYW
Sbjct: 705 ISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/439 (32%), Positives = 219/439 (49%), Gaps = 23/439 (5%)

Query: 33  SLFDRSPQR-NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +LF++   + N   +N ++ E  R     EAL  F  +R+L L    ST    +K+C  L
Sbjct: 106 TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 165

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GRQ H + +  GF  D+ VS++LVD+Y +   + D R +FD+++  N+VSWTS++
Sbjct: 166 LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 225

Query: 152 SGYARNKMNDRVLELFHRMQVE--------GIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +GY +N    R L LF    VE         +  +     +VL   +     +    VH 
Sbjct: 226 TGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG 285

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            +IK G E    V N L+  Y K   +  +R VFDGM +RD I+WNS++A Y  N +  E
Sbjct: 286 FLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTE 345

Query: 264 AFETFNNMGLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           + E F+ M   G       T  +V+  CA +   RL + +H QV+K G++ +  + T ++
Sbjct: 346 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSII 405

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KCGK+E A K F  MRE K+V SW+AM++G+  +G    A+  F +M   GV+PN 
Sbjct: 406 DMYCKCGKVEMARKAFDRMRE-KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNY 464

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKT-NYEKSFSVGT----ALLNAYVKKGILDEAAKVFE 437
            T+  +L A       +   H  K  ++E     G      +++   + G L EA   F+
Sbjct: 465 ITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEA---FD 521

Query: 438 LID----EKDIVAWSAMLA 452
           LI       D V W A+L 
Sbjct: 522 LIKGMKLRPDFVVWGALLG 540



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 240/469 (51%), Gaps = 19/469 (4%)

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD-MNESNVVSWTSLLSGYARNKMNDRVLE 165
           SGF++  ++    V L  R +N  +   +F+  ++++NV SW S+++  AR+  +   L 
Sbjct: 80  SGFSKRRSICAGAV-LRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALR 138

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
            F  M+   +KPN  TF   +   +    + +  Q H   +  G E    V +AL+ MY 
Sbjct: 139 AFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYS 198

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL--AGAE------ 277
           K   +RDAR +FD +  R+ ++W SM+ GYV N+    A   F    +  +G+E      
Sbjct: 199 KCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVC 258

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +     VSV+  C+   E  +   +H  ++K G + D  +   LM AY+KCG++  + ++
Sbjct: 259 VDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRV 318

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVS 396
           F  M E +DV+SW ++I+ + QNG    ++  F +M ++G +  N  T S +L A  A S
Sbjct: 319 FDGMAE-RDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA-CAHS 376

Query: 397 PFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             Q     +H  +IK   E +  VGT++++ Y K G ++ A K F+ + EK++ +WSAM+
Sbjct: 377 GSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMV 436

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           AGY   G  + A++++ ++   GVKPN  TF SV+ AC+      E    F A S +  +
Sbjct: 437 AGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDV 496

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQH 559
              +     +V +  + G ++ A ++ K  + R D V W +++     H
Sbjct: 497 EPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 163/346 (47%), Gaps = 12/346 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGST------LSS 83
           ++LFD    RN V +  ++  Y ++     AL LF    +   G    G        + S
Sbjct: 207 RTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVS 266

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           VL  C  + +      VH   +K GF  D+ V  +L+D Y +   +   RRVFD M E +
Sbjct: 267 VLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERD 326

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVH 202
           V+SW S+++ YA+N M+   +E+FHRM  +G I  N+ T S VL   A  G       +H
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIH 386

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             VIK G E    V  ++I MY K   V  AR  FD M +++  +W++MVAGY  +    
Sbjct: 387 DQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAK 446

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-TGL 321
           EA E F  M +AG +    TFVSV+  C+    L        + + +  D +  +   G 
Sbjct: 447 EALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWF-KAMSHEFDVEPGVEHYGC 505

Query: 322 MV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           MV    + G +++A  +   M+   D V W A++     +  +DL 
Sbjct: 506 MVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLG 551


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/740 (35%), Positives = 421/740 (56%), Gaps = 44/740 (5%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           T  +  +MR  + +    VFD M   N VS+ +++SGY RN       +LF +M  + + 
Sbjct: 37  TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL- 95

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
              F+++ +L   A    +  A     M+  +  E      NA++S Y++S  V +AR V
Sbjct: 96  ---FSWNLMLTGYARNRRLRDA----RMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDV 148

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCATT 293
           FD M  ++SI+WN ++A YV +    EA   FE+ ++  L         +V         
Sbjct: 149 FDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVK-------R 201

Query: 294 KELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             L  ARQL  Q+ +++ I ++      ++  Y++ G +  A ++F     ++DV +WTA
Sbjct: 202 NMLGDARQLFDQIPVRDLISWN-----TMISGYAQDGDLSQARRLFEE-SPVRDVFTWTA 255

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           M+  ++Q+G +D A   F +M ++       +Y++++          +   + +     +
Sbjct: 256 MVYAYVQDGMLDEARRVFDEMPQK----REMSYNVMIAGYAQYKRMDMGRELFEEMPFPN 311

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                 +++ Y + G L +A  +F+++ ++D V+W+A++AGYAQ G  E A+ +  ++  
Sbjct: 312 IGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKR 371

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           +G   N  TF   ++AC A  AA+E GKQ H   ++        V +ALV MY K G I+
Sbjct: 372 DGESLNRSTFCCALSAC-ADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCID 430

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            A +VF+  + +D+VSWN+M+ GYA+HG  ++AL VF+ M    ++ D IT +GV++AC+
Sbjct: 431 EAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACS 490

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           H GL D G +YF  M  ++ I P  +HY+CM+DL  RAG LE+A ++I  MPF   A  W
Sbjct: 491 HTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATW 550

Query: 653 RTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
             +L A R+                ++PH+S +YVLLSN+YAA+G W + +++R  M   
Sbjct: 551 GALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQI 610

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
            V+K  GYSW+EV+NK ++F  GD  HP+  +IY+ LEEL  ++K  GY   T  VL D+
Sbjct: 611 GVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDV 670

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           ++E K+ +L  HSE+LA+AFG++  P+G P++++KNLRVC DCH  IK ISK+  R I+V
Sbjct: 671 EEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIV 730

Query: 819 RDTNRFHHFKEGLCSCGDYW 838
           RD++R+HHF EG+CSC DYW
Sbjct: 731 RDSHRYHHFSEGICSCRDYW 750



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 251/542 (46%), Gaps = 44/542 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-----LGIRRLGLPLFGSTLSSVLKTC 88
           +FD  P RN V YN ++  Y R++    A +LF       +    L L G   +  L+  
Sbjct: 55  VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDA 114

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             LFD             S   +DV    +++  Y+R+ +V++ R VFD M   N +SW 
Sbjct: 115 RMLFD-------------SMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWN 161

Query: 149 SLLSGYARNKMNDRVLELFH-RMQVEGIKPNSFTFSTV-LGVLADEGIVATAVQVHTMVI 206
            LL+ Y R+   +    LF  +   E I  N      V   +L D   +   + V  ++ 
Sbjct: 162 GLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLI- 220

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
                      N +IS Y +   +  AR +F+    RD  TW +MV  YV + +  EA  
Sbjct: 221 ---------SWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARR 271

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M     +    ++  +I   A  K + + R+L  ++    I    NI   ++  Y 
Sbjct: 272 VFDEM----PQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIG-SWNI---MISGYC 323

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           + G +  A  +F MM + +D VSW A+I+G+ QNG  + A+N   +M R+G   N  T+ 
Sbjct: 324 QNGDLAQARNLFDMMPQ-RDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFC 382

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             L+A   ++      QVH  +++T YEK   VG AL+  Y K G +DEA  VF+ +  K
Sbjct: 383 CALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHK 442

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           DIV+W+ MLAGYA+ G    A+ ++  + + GVKP+E T   V++AC+         + F
Sbjct: 443 DIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYF 502

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
           H+ +    +       + ++ +  + G +E A  + +    + D  +W +++     HG+
Sbjct: 503 HSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGN 562

Query: 562 TK 563
            +
Sbjct: 563 ME 564



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 203/462 (43%), Gaps = 75/462 (16%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLP-----LFGSTLSSVLK 86
           + +FDR P +N + +N LL  Y R    +EA  LF       L      + G    ++L 
Sbjct: 146 RDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLG 205

Query: 87  TCGCLFDHVFGRQ-VHCECVKSGFARDVNVS-----------------TSLVDLYMRTNN 128
               LFD +  R  +    + SG+A+D ++S                 T++V  Y++   
Sbjct: 206 DARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGM 265

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           +++ RRVFD+M +   +S+  +++GYA+ K  D   ELF  M      PN  ++      
Sbjct: 266 LDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPF----PNIGSW------ 315

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
                                        N +IS Y ++  +  AR +FD M  RDS++W
Sbjct: 316 -----------------------------NIMISGYCQNGDLAQARNLFDMMPQRDSVSW 346

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
            +++AGY  N L+ EA      M   G  L RSTF   +  CA    L L +Q+H QV++
Sbjct: 347 AAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVR 406

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
            G +    +   L+  Y KCG +++A  +F  ++  KD+VSW  M++G+ ++G    A+ 
Sbjct: 407 TGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQH-KDIVSWNTMLAGYARHGFGRQALT 465

Query: 369 FFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNY-----EKSFSVGTALL 420
            F  M   GV+P+  T   +L+A            + H +  +Y      K ++    LL
Sbjct: 466 VFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLL 525

Query: 421 NAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
               + G L+EA  +   +  E D   W A+L      G+ E
Sbjct: 526 G---RAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNME 564



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/471 (22%), Positives = 215/471 (45%), Gaps = 76/471 (16%)

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T  C   IS ++++     A  VFD M  R+S+++N+M++GY+ N               
Sbjct: 33  TVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRN--------------- 77

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                                +  LAR L  ++    + F  N+   ++  Y++  ++ D
Sbjct: 78  --------------------AKFSLARDLFDKMPHKDL-FSWNL---MLTGYARNRRLRD 113

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F  M E KDVVSW AM+SG++++G +D A + F +M  +    N  +++ +L A  
Sbjct: 114 ARMLFDSMPE-KDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYV 168

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                +    + ++  +        L+  YVK+ +L +A ++F+ I  +D+++W+ M++G
Sbjct: 169 RSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISG 228

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           YAQ GD   A    R+L  E    + FT+++++ A        E  + F     K +++ 
Sbjct: 229 YAQDGDLSQA----RRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSY 284

Query: 514 ALCVS--------------------------SALVTMYSKKGNIESASEVFKRQRKRDLV 547
            + ++                          + +++ Y + G++  A  +F    +RD V
Sbjct: 285 NVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSV 344

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SW ++I GYAQ+G  ++A+ +  EM+R     +  TF   ++AC     ++ G+Q    +
Sbjct: 345 SWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQV 404

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           V   +    +   + +V +Y + G +++A D+   +      + W T+LA 
Sbjct: 405 VRTGYEKGCLVG-NALVGMYCKCGCIDEAYDVFQGVQHKDIVS-WNTMLAG 453



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 165/352 (46%), Gaps = 34/352 (9%)

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIK 406
            V  T  IS H++NG  DLA+  F  M       N  +Y+ +++     + F +   +  
Sbjct: 33  TVKCTKAISTHMRNGHCDLALCVFDAMPLR----NSVSYNAMISGYLRNAKFSLARDLFD 88

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
               K       +L  Y +   L +A  +F+ + EKD+V+W+AML+GY + G  + A  +
Sbjct: 89  KMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDV 148

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           + ++  +    N  +++ ++ A    S  +E+ ++      ++K +  L   + L+  Y 
Sbjct: 149 FDRMPHK----NSISWNGLL-AAYVRSGRLEEARRL----FESKSDWELISCNCLMGGYV 199

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K+  +  A ++F +   RDL+SWN+MI GYAQ G   +A  +F+E   +D+     T+  
Sbjct: 200 KRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDV----FTWTA 255

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           ++ A    G++DE ++ FD M  +  +      Y+ M+  Y++   ++   ++   MPF 
Sbjct: 256 MVYAYVQDGMLDEARRVFDEMPQKREM-----SYNVMIAGYAQYKRMDMGRELFEEMPFP 310

Query: 647 ASATVWRTVLA----------ACRLISLQPH-DSAIYVLLSNMYAATGHWQE 687
              + W  +++          A  L  + P  DS  +  +   YA  G ++E
Sbjct: 311 NIGS-WNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEE 361


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 235/584 (40%), Positives = 356/584 (60%), Gaps = 21/584 (3%)

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           ++ +E     + + ++ C    E    + LH ++LK G   D      L+  Y K   + 
Sbjct: 31  VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DASK+F  M E ++ +S+  +I G+ ++     A+  F ++ RE V PN FT++ +L A 
Sbjct: 91  DASKLFDEMPE-RNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQAC 148

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +       Q+H H+IK        V  AL++ Y K G ++ + ++F     ++ V W+
Sbjct: 149 ATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWN 208

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            ++ G+ Q+GD E A++++  +    V+  E T+SS + AC A  AA+E G Q H+ ++K
Sbjct: 209 TVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC-ASLAALEPGLQIHSLTVK 267

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
              +  + V++AL+ MY+K G+I+ A  VF    K+D VSWN+MI GY+ HG  ++AL +
Sbjct: 268 TTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRI 327

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F +M+  +++ D +TF+GV++AC +AGL+D+GQ YF  M+ +H I P +EHY+CMV L  
Sbjct: 328 FDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLG 387

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVL 674
           R G L+KA+ +I+ +PF  S  VWR +L AC              R++ ++P D A +VL
Sbjct: 388 RGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVL 447

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSNMYA    W   A VRK M  + VKKE G SWIE +   +SF  GD SHP+   I   
Sbjct: 448 LSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGM 507

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           LE L  + K AGY P+ + VL D++DE KE +L  HSERLA++FG++ TP+G+P++I+KN
Sbjct: 508 LEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKN 567

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR+C DCH  IK ISK+ +R+IVVRD NRFHHF+EGLCSCGDYW
Sbjct: 568 LRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 192/384 (50%), Gaps = 9/384 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +HCE +K G   D+     L+++Y++++ + D  ++FD+M E N +S+ +L+ GYA 
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +      +ELF R+  E + PN FTF++VL   A    +    Q+H  VIK G      V
Sbjct: 117 SVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 175

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            NAL+ +Y K   + ++  +F     R+ +TWN+++ G+V      +A   F NM     
Sbjct: 176 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 235

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           + T  T+ S ++ CA+   L    Q+HS  +K   D D  +   L+  Y+KCG ++DA  
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F +M + +D VSW AMISG+  +G    A+  F +M    V+P+  T+  +L+A     
Sbjct: 296 VFDLMNK-QDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAG 354

Query: 397 PF-QVHAH----IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAM 450
              Q  A+    I     E      T ++    + G LD+A K+ + I  +  ++ W A+
Sbjct: 355 LLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRAL 414

Query: 451 LAGYAQIGDTE-GAVKIYRQLTSE 473
           L       D E G +   R L  E
Sbjct: 415 LGACVIHNDIELGRISAQRVLEME 438



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 166/334 (49%), Gaps = 2/334 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+RN + +  L+  Y       EA+ LF+ + R  LP    T +SVL+ C  +  
Sbjct: 95  LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLP-NQFTFASVLQACATMEG 153

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+HC  +K G   DV VS +L+D+Y +   +E+   +F +    N V+W +++ G
Sbjct: 154 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVG 213

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +    ++ L LF  M    ++    T+S+ L   A    +   +Q+H++ +K   +  
Sbjct: 214 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKD 273

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V NALI MY K   ++DAR VFD M  +D ++WN+M++GY  + L  EA   F+ M  
Sbjct: 274 IVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQE 333

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKME 332
              +  + TFV V+  CA    L   +   + ++++ GI+      T ++    + G ++
Sbjct: 334 TEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLD 393

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            A K+   +     V+ W A++   + +  I+L 
Sbjct: 394 KAVKLIDEIPFQPSVMVWRALLGACVIHNDIELG 427


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/668 (36%), Positives = 395/668 (59%), Gaps = 33/668 (4%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH  V+K G      V + L+++Y K   + DAR VFD M  R+ + W +++ G+V N  
Sbjct: 89  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
              A   F  M  AG+  +  T  +V+  C++ + L+L  Q H+ ++K  +DFD ++ + 
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSA 208

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L   YSKCG++EDA K FS +RE K+V+SWT+ +S    NGA    +  F +M    ++P
Sbjct: 209 LCSLYSKCGRLEDALKTFSRIRE-KNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKP 267

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N FT +  L+    +       QV++  IK  YE +  V  +LL  Y+K G + EA ++F
Sbjct: 268 NEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLF 327

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDT-----------EGAVKIYRQLTSEGVKPNEFTFSSV 485
             +D+  +V W+AM+AG+AQ+ +              A+K++ +L   G+KP+ FT SSV
Sbjct: 328 NRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSV 387

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           ++ C+    A+EQG+Q HA +IK    + + VS++L++MYSK G+IE AS+ F     R 
Sbjct: 388 LSVCSR-MLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRT 446

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           +++W SMI G++QHG +++AL +F++M    +  + +TF+GV++AC+HAG+V +   YF+
Sbjct: 447 MIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFE 506

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----- 660
           IM  ++ I P M+HY CMVD++ R G LE+A++ I +M +  S  +W   +A C+     
Sbjct: 507 IMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNL 566

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    L+SL+P D   YVLL NMY +   +++ +RVRK+M + KV K   +SWI +
Sbjct: 567 ELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISI 626

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ-- 769
           K+K YSF     +HPQS+ I   LE+L  ++K+ GY+   S  + D ++E ++       
Sbjct: 627 KDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIY 686

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSE+LAI FGL   P  +P+++VK+  +C D H  IK +S L  R+I+V+D+ R H F  
Sbjct: 687 HSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFAN 746

Query: 830 GLCSCGDY 837
           G CSCG++
Sbjct: 747 GECSCGNF 754



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 234/478 (48%), Gaps = 17/478 (3%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           VH   +K+G   +  V + LV++Y +  N+ED RRVFD+M   NVV+WT+L+ G+ +N  
Sbjct: 89  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
               + +F  M   G  P+ +T S VL   +    +    Q H  +IK   +   SV +A
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSA 208

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L S+Y K   + DA   F  + +++ I+W S V+    N   ++    F  M     +  
Sbjct: 209 LCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPN 268

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             T  S +  C     L L  Q++S  +K G + +  +R  L+  Y K G + +A ++F+
Sbjct: 269 EFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFN 328

Query: 340 MMREMKDVVSWTAMISGHLQNGAI-----------DLAVNFFCQMTREGVRPNGFTYSII 388
            M +   +V+W AMI+GH Q   +             A+  F ++   G++P+ FT S +
Sbjct: 329 RMDD-ASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSV 387

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L+    +       Q+HA  IKT +     V T+L++ Y K G ++ A+K F  +  + +
Sbjct: 388 LSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTM 447

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           +AW++M+ G++Q G ++ A+ I+  ++  GV+PN  TF  V++AC+      +    F  
Sbjct: 448 IAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEI 507

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
              K K+  A+     +V M+ + G +E A    K+   +     W++ I G   HG+
Sbjct: 508 MQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGN 565



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 232/463 (50%), Gaps = 20/463 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD   +RN V +  L+  + ++S  + A+++F  +   G      TLS+VL  C  L  
Sbjct: 124 VFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQS 183

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q H   +K     D +V ++L  LY +   +ED  + F  + E NV+SWTS +S 
Sbjct: 184 LKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSA 243

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            A N    + L LF  M    IKPN FT ++ L    +   +    QV+++ IK G E  
Sbjct: 244 CADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESN 303

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT---------NELHM-- 262
             V N+L+ +YLKS  + +A  +F+ M+D   +TWN+M+AG+           +  H   
Sbjct: 304 LRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS 363

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EA + F+ + L+G +    T  SV+ +C+    +    Q+H+Q +K G   D  + T L+
Sbjct: 364 EALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLI 423

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YSKCG +E ASK F  M   + +++WT+MI+G  Q+G    A++ F  M+  GVRPN 
Sbjct: 424 SMYSKCGSIERASKAFLEM-STRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNA 482

Query: 383 FTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFE 437
            T+  +L+A      VS    +  I++  Y+   ++     +++ +V+ G L++A    +
Sbjct: 483 VTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIK 542

Query: 438 LID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
            ++ E     WS  +AG    G+ E       QL S  +KP +
Sbjct: 543 KMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLS--LKPKD 583



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 216/426 (50%), Gaps = 52/426 (12%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF-SMM 341
           +V +++ C  T+     + +H  V+K G   +  + + L+  Y+KCG MEDA ++F +M+
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
           R  ++VV+WT ++ G +QN     A++ F +M   G  P+ +T S +L A  ++      
Sbjct: 130 R--RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG 187

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            Q HA+IIK + +   SVG+AL + Y K G L++A K F  I EK++++W++ ++  A  
Sbjct: 188 DQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADN 247

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G     ++++ ++ +  +KPNEFT +S ++ C     ++E G Q ++  IK    + L V
Sbjct: 248 GAPVKGLRLFVEMIAVDIKPNEFTLTSALSQC-CEILSLELGTQVYSLCIKFGYESNLRV 306

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK-----------AL 566
            ++L+ +Y K G I  A  +F R     +V+WN+MI G+AQ     K           AL
Sbjct: 307 RNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEAL 366

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF----------DIMVNEHHI--- 613
           ++F ++    ++ D  T   V++ C+    +++G+Q            D++V+   I   
Sbjct: 367 KLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMY 426

Query: 614 -----------------YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA---SATVWR 653
                              TM  ++ M+  +S+ GM ++A+ I   M  A    +A  + 
Sbjct: 427 SKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFV 486

Query: 654 TVLAAC 659
            VL+AC
Sbjct: 487 GVLSAC 492


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 274/833 (32%), Positives = 441/833 (52%), Gaps = 70/833 (8%)

Query: 72  LGLPLFGS-TLSSVLKTCGCLFDHV----------FGRQVHCECVKSGFARDVNVSTSLV 120
           L  PLF S +L++ L T    FD +            R VH + +K     D+ +  +L+
Sbjct: 80  LSEPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALI 137

Query: 121 DLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
             Y++   V D  +VF  ++  NVVS+T+L+SG++++   D  +ELF  M   GI+PN +
Sbjct: 138 SAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEY 197

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TF  +L             QVH +V+K G      +CNAL+ +Y K   +     +F+ M
Sbjct: 198 TFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEM 257

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA-GAELTRSTFVSVIKLCATTKELRLA 299
            +RD  +WN++++  V    + EAF+ F  M L  G ++   +  +++  CA + +    
Sbjct: 258 PERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKG 317

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +QLH+  LK G++   ++ + L+  Y+KCG   D + +F  M  ++DV++WT MI+ +++
Sbjct: 318 QQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETM-PIRDVITWTGMITSYME 376

Query: 360 NGAIDLAV-------------------------------NFFCQMTREGVRPNGFTYSII 388
            G +D AV                                 F +M  EGV  +  T + I
Sbjct: 377 FGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSI 436

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKD 443
           +TA   +  F    Q+   ++K     +  + TAL++ Y + G +++A K+F +   E D
Sbjct: 437 ITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEND 496

Query: 444 IVA-WSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQ 501
             A  ++M+ GYA+ G    A+ ++    SEG +  +E   +S+++ C +     E GKQ
Sbjct: 497 YTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFH-EMGKQ 555

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H  ++K+ L     V +A V+MYSK  N++ A  VF     +D+VSWN ++ G+  H  
Sbjct: 556 MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQ 615

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHA--GLVDEGQQYFDIMVNEHHIYPTMEH 619
             KAL ++K+M +  ++ D ITF  +I+A  H    LVD  +  F  M  EH+I PT+EH
Sbjct: 616 GDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEH 675

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y+  + +  R G+LE+A   I  MP      VWR +L +CR              +++++
Sbjct: 676 YASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVE 735

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D   Y+L SN+Y+A+G W    +VR+ M ++  +K    SWI  +NK +SF A D SH
Sbjct: 736 PKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSH 795

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           PQ   IYS LE L       GY PDTS+VLQ++++  K+  L  HS +LA  FG++ T  
Sbjct: 796 PQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKP 855

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G P+QIVKN+R+CGDCH  +K +S + RR I++RDT+ FH F +G CSC DYW
Sbjct: 856 GKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 229/485 (47%), Gaps = 38/485 (7%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           N V Y  L+  + +     EA+ LF  +   G+     T  ++L  C    D+  G QVH
Sbjct: 160 NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVH 219

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
              VK G    V +  +L+ LY +   ++   R+F++M E ++ SW +++S   +    D
Sbjct: 220 GIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD 279

Query: 162 RVLELFHRMQV-EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
              + F  MQ+ +G+K + F+ ST+L   A         Q+H + +K G E   SV ++L
Sbjct: 280 EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSL 339

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM--------- 271
           I  Y K     D   +F+ M  RD ITW  M+  Y+   +   A E FN M         
Sbjct: 340 IGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYN 399

Query: 272 ----GLA------------------GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
               GL+                  G E++  T  S+I  C   K  ++++Q+   V+K 
Sbjct: 400 AVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKF 459

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS-WTAMISGHLQNGAIDLAVN 368
           GI  +  I T L+  Y++CG+MEDA KIF       D  +  T+MI G+ +NG ++ A++
Sbjct: 460 GILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAIS 519

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAY 423
            F     EG        S  + +      F     Q+H H +K+       VG A ++ Y
Sbjct: 520 LFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMY 579

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K   +D+A +VF  ++ +DIV+W+ ++AG+      + A+ I++++   G+KP+  TF+
Sbjct: 580 SKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFA 639

Query: 484 SVINA 488
            +I+A
Sbjct: 640 LIISA 644



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 215/465 (46%), Gaps = 52/465 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGCLF 92
           LF+  P+R+   +N ++    ++  + EA + F G++   GL +   +LS++L  C    
Sbjct: 253 LFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSV 312

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT---- 148
             + G+Q+H   +K G    ++VS+SL+  Y +  +  D   +F+ M   +V++WT    
Sbjct: 313 KPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMIT 372

Query: 149 ---------------------------SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                                      ++L+G +RN    R LELF  M  EG++ +  T
Sbjct: 373 SYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCT 432

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF--DG 239
            ++++           + Q+   V+K G    + +  AL+ MY +   + DA  +F    
Sbjct: 433 LTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRS 492

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF-VSVIKLCATTKELRL 298
           +E+  +    SM+ GY  N    EA   F++    GA +       S++ LC +     +
Sbjct: 493 LENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEM 552

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +Q+H   LK+G+  +  +    +  YSKC  M+DA ++F+ M  M+D+VSW  +++GH+
Sbjct: 553 GKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMN-MQDIVSWNGLVAGHV 611

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHA-----------HIIKT 407
            +   D A+  + +M + G++P+  T+++I++A        V +           H IK 
Sbjct: 612 LHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKP 671

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAML 451
             E   S     ++   + G+L+EA +    +  E D+  W A+L
Sbjct: 672 TLEHYAS----FISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 12/331 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F++ P+RN + YN +L    R+     AL LF+ +   G+ +   TL+S++  CG L  
Sbjct: 386 VFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKS 445

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVSWTSLL 151
               +Q+    +K G   +  + T+LVD+Y R   +ED  ++F   +  N      TS++
Sbjct: 446 FKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMI 505

Query: 152 SGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            GYARN   +  + LFH  Q EG I  +    +++L +    G      Q+H   +K+G 
Sbjct: 506 CGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGL 565

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              T V NA +SMY K   + DA  VF+ M  +D ++WN +VAG+V +    +A   +  
Sbjct: 566 ITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKK 625

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL------MVA 324
           M  AG +    TF  +I     T EL L     S  L   ++ +HNI+  L      +  
Sbjct: 626 MEKAGIKPDSITFALIISAYKHT-ELNLVDSCRS--LFVSMETEHNIKPTLEHYASFISV 682

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             + G +E+A +    M    DV  W A+++
Sbjct: 683 LGRWGLLEEAEQTIRNMPLEPDVYVWRALLN 713



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 88/158 (55%), Gaps = 2/158 (1%)

Query: 31  DQSLFDRSPQRNFVE-YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS-SVLKTC 88
           ++  + RS + ++      ++  Y R+    EA++LF   +  G  +    +S S+L  C
Sbjct: 485 EKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLC 544

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G +  H  G+Q+HC  +KSG   +  V  + V +Y +  N++D  RVF+ MN  ++VSW 
Sbjct: 545 GSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWN 604

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL 186
            L++G+  +   D+ L ++ +M+  GIKP+S TF+ ++
Sbjct: 605 GLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALII 642


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/778 (32%), Positives = 428/778 (55%), Gaps = 26/778 (3%)

Query: 38  SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           SP  N   +N ++     + L  +AL  +  +R   L     T  SV+ +C  + D   G
Sbjct: 81  SPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELG 140

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
             VH   ++ GF  D+ +  +L+D+Y R  ++++ R VF++M+  + VSW SL+SGY  N
Sbjct: 141 CIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSN 200

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--GEVVTS 215
              +  L+++H+ ++ G+ P+ FT S+VL        V   V VH ++ K G  G+V+  
Sbjct: 201 GFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI-- 258

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           + N L+SMY K + +R+AR VF  M  +DS+TWN+M+ GY     H  + + F +M + G
Sbjct: 259 IGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDG 317

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 +  S I+ C  + +L++ + +H  ++ +G + D      L+  Y+KCG +  A 
Sbjct: 318 FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQ 377

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F   +  KD V+W ++I+G+ Q+G     +  F  M  E  +P+  T+ ++L+    +
Sbjct: 378 EVFDTTK-CKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQL 435

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +       +H  +IK  +E    +G +LL+ Y K G +D+  KVF  +   DI++W+ ++
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           A      D     ++  ++ +EG+ P+E T   ++  C+   A   QGK+ H    K+  
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL-LAVRRQGKEIHGYIFKSGF 554

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            + + + +AL+ MYSK G++E+  +VFK  +++D+V+W ++I  +  +G  KKAL+ F++
Sbjct: 555 ESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQD 614

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M    +  D + FI  I AC+H+G+V EG ++FD M  ++++ P MEHY+C+VDL +R+G
Sbjct: 615 MELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSG 674

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
           +L +A + I  MP    A++W  +L+ACR              ++ L   D+  YVL+SN
Sbjct: 675 LLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSN 734

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA  G W +   VR  M  + +KKE G SWIE++ + Y F  GD S  Q +++   LE 
Sbjct: 735 IYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEY 794

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           L   +   GY  D  + L D++++ K  +L  HSERLAIAFGL+ T  G+PL I   L
Sbjct: 795 LVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLIFPTL 852



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 276/552 (50%), Gaps = 24/552 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+    R+ V +N L+  YC +   ++AL+++   R  G+     T+SSVL  CG L  
Sbjct: 178 VFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMA 237

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  VH    K G A DV +   L+ +Y +   + + RRVF  M   + V+W +++ G
Sbjct: 238 VKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG 297

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+   ++  ++LF  M ++G  P+  + ++ +      G +     VH  +I +G E  
Sbjct: 298 YAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECD 356

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T  CN LI MY K   +  A+ VFD  + +DS+TWNS++ GY  +  + E  E+F  M +
Sbjct: 357 TVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKM 416

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    TFV ++ + +   ++   R +H  V+K G + +  I   L+  Y+KCG+M+D
Sbjct: 417 E-RKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
             K+FS M    D++SW  +I+  +      +      +M  EG+ P+  T   +L   P
Sbjct: 476 LLKVFSYMSA-HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEAT---VLGILP 531

Query: 394 AVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
             S         ++H +I K+ +E +  +G AL+  Y K G L+   KVF+ + EKD+V 
Sbjct: 532 MCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVT 591

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH--- 503
           W+A+++ +   G+ + A+K ++ +   GV P+   F + I AC+  S  V++G +F    
Sbjct: 592 WTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSH-SGMVKEGLRFFDRM 650

Query: 504 --ACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHG 560
               +++ ++ +  CV    V + ++ G +  A E +     K D   W +++      G
Sbjct: 651 KTDYNLEPRMEHYACV----VDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARG 706

Query: 561 HTKKALEVFKEM 572
           +T  A  V K++
Sbjct: 707 NTNIAQRVSKKI 718



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 242/485 (49%), Gaps = 13/485 (2%)

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           F  S++L  L+          VH+++I +G  +       LIS Y + K    + +VF  
Sbjct: 20  FLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRS 79

Query: 240 MEDRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
           +   +++  WNS++     N L  +A   +  M     +    TF SVI  CA   +L L
Sbjct: 80  ISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLEL 139

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
              +H   ++ G + D  I   L+  YS+   +++A  +F  M   +D VSW ++ISG+ 
Sbjct: 140 GCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN-RDSVSWNSLISGYC 198

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFS 414
            NG  + A++ + +    G+ P+ FT S +L A  ++   +    VH  I K        
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI 258

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           +G  LL+ Y K   L EA +VF  +  KD V W+ M+ GYAQ+G  E +VK++  +  +G
Sbjct: 259 IGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DG 317

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
             P+  + +S I AC   S  ++ GK  H   I +         + L+ MY+K G++ +A
Sbjct: 318 FVPDMLSITSTIRAC-GQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            EVF   + +D V+WNS+I GY Q G+ K+ LE FK M + + + D +TF+ +++  +  
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQL 435

Query: 595 GLVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
             +++G+  + D++  +      +   + ++D+Y++ G ++  + + + M  A     W 
Sbjct: 436 ADINQGRGIHCDVI--KFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS-AHDIISWN 492

Query: 654 TVLAA 658
           TV+A+
Sbjct: 493 TVIAS 497



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 203/440 (46%), Gaps = 47/440 (10%)

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           FNN      E  RS+ +  +     T +LR    +HS ++ +G+         L+  Y++
Sbjct: 10  FNNTPEPSQEFLRSSLLKTLSSAKNTPQLR---TVHSLIITSGLSLSVIFSGKLISKYAQ 66

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
                 +  +F  +    +V  W ++I     NG    A+ ++ +M  + ++P+ FT+  
Sbjct: 67  VKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPS 126

Query: 388 ILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           ++ +   +   +    VH H ++  +E    +G AL++ Y +   LD A  VFE +  +D
Sbjct: 127 VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            V+W+++++GY   G  E A+ +Y +    G+ P+ FT SSV+ AC +   AV++G   H
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGS-LMAVKEGVAVH 245

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
               K  +   + + + L++MY K   +  A  VF +   +D V+WN+MICGYAQ G  +
Sbjct: 246 GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHE 305

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH-HIYPTMEHYSC 622
            ++++F +M    +  D ++    I AC  +G         D+ V +  H Y     + C
Sbjct: 306 ASVKLFMDMIDGFVP-DMLSITSTIRACGQSG---------DLQVGKFVHKYLIGSGFEC 355

Query: 623 -------MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLL 675
                  ++D+Y++ G L  A ++ +                 C+       DS  +  L
Sbjct: 356 DTVACNILIDMYAKCGDLLAAQEVFDT--------------TKCK-------DSVTWNSL 394

Query: 676 SNMYAATGHWQERARVRKLM 695
            N Y  +G+++E     K+M
Sbjct: 395 INGYTQSGYYKEGLESFKMM 414


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 281/769 (36%), Positives = 400/769 (52%), Gaps = 131/769 (17%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD------------------- 238
           A  VH  VI +G ++   + N LI +Y KS     AR +FD                   
Sbjct: 32  ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSA 91

Query: 239 --------------GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
                          ++ RD++ +N+M+ GY        A E F  M  A  +    TF 
Sbjct: 92  LGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFA 151

Query: 285 SVIKLCATT---KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK---------ME 332
           SV  L A+T    + R   Q+H  V+K GI+    +   L+  Y KC           M 
Sbjct: 152 SV--LSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMA 209

Query: 333 DASKIFSMM------------------------REMKDV------VSWTAMISGHLQNGA 362
            A K+F  M                        RE+ D       ++W AMISG+L +G 
Sbjct: 210 SARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGL 269

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT--NYEKSF--S 414
            + A+  F +M   GV+ +  TY+ +++A      F    QVHA+I+K   N ++ F  S
Sbjct: 270 FEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLS 329

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY-------------------- 454
           VG  L+  Y K G +D A K+F  +  KDI+ W+ +L+GY                    
Sbjct: 330 VGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKN 389

Query: 455 -----------AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
                      AQ G  E A+K++ Q+  +G +PN++ F+  I AC+    A+E G+Q H
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSV-LGALENGRQLH 448

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A  +    ++ L V +A++TMY++ G +E+A  +F      D VSWNSMI    QHGH  
Sbjct: 449 AQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGV 508

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           KA+E++++M ++ +  D  TF+ V++AC+HAGLV+EG +YF+ M+  + I P  +HY+ M
Sbjct: 509 KAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARM 568

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
           +DL+ RAG    A ++I+ MPF A A +W  +LA CR              L  L P   
Sbjct: 569 IDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD 628

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             YVLLSNMYA+ G W + AR RKLM DR VKKE   SW EV+NK + FL  D  HP+  
Sbjct: 629 GTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVL 688

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            IY+ LE+L+  +K  GY PDT YVL D++ EHKE  LS HSE+LA+AFGL+  P GA +
Sbjct: 689 SIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATV 748

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++ KNLR+CGDCH  IK +SK+  R+IVVRD  RFHHFK G CSC +YW
Sbjct: 749 RVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 270/609 (44%), Gaps = 123/609 (20%)

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L  +   R VH   + SGF    ++   L+D+Y ++++    R++FD++ + +V++ T+L
Sbjct: 26  LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85

Query: 151 LSGYAR-------------------------------NKMND--RVLELFHRMQVEGIKP 177
           ++ Y+                                + MND    +ELF  M+    +P
Sbjct: 86  ITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQP 145

Query: 178 NSFTFSTVLG----VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK------- 226
           + FTF++VL     +  DE       Q+H  V+K G E+  +V NAL+S+Y+K       
Sbjct: 146 DDFTFASVLSASTLIFYDE---RQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLV 202

Query: 227 ----------------------------SKMVRD-----ARAVFDGMEDRDSITWNSMVA 253
                                       +  VR+     AR + D M ++  I WN+M++
Sbjct: 203 SSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMIS 262

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           GY+ + L  +A   F  M L G ++  ST+ SVI  CA      L +Q+H+ +LKN ++ 
Sbjct: 263 GYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNP 322

Query: 314 DHNIRTG-----------------------------------LMVAYSKCGKMEDASKIF 338
           D +                                       L+  Y   G+ME+A   F
Sbjct: 323 DRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFF 382

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           + M E K++++WT MISG  QNG  + A+  F QM  +G  PN + ++  +TA   +   
Sbjct: 383 AQMPE-KNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGAL 441

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA I+   ++ + SVG A++  Y + GI++ A  +F  +   D V+W++M+A  
Sbjct: 442 ENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAAL 501

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q G    A+++Y Q+  EG+ P+  TF +V++AC+      E  + F++      +   
Sbjct: 502 GQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPG 561

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQ--RKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               + ++ ++ + G    A  V        R  + W +++ G   HG+    +E  +++
Sbjct: 562 EDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPI-WEALLAGCRTHGNMDLGIEAAEKL 620

Query: 573 RRQDLEFDG 581
            +   + DG
Sbjct: 621 FKLIPQHDG 629



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/527 (23%), Positives = 221/527 (41%), Gaps = 87/527 (16%)

Query: 29  KKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           K  + +F+ +P   R+ V YN ++  Y   +    A+ LF  +R         T +SVL 
Sbjct: 96  KMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLS 155

Query: 87  TCGCLF-DHVFGRQVHCECVKSGF------------------------------------ 109
               +F D     Q+H   VK G                                     
Sbjct: 156 ASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLF 215

Query: 110 ----ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
                R+  + T+L+  Y+R  ++   R + D M E   ++W +++SGY  + + +  L 
Sbjct: 216 DEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALT 275

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN----GGEVVTSVCNALI 221
           LF +M++ G++ +  T+++V+   AD G      QVH  ++KN      + + SV N LI
Sbjct: 276 LFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLI 335

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT------------------------ 257
           ++Y K   V  AR +F  M  +D ITWN++++GYV                         
Sbjct: 336 TLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTV 395

Query: 258 -------NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
                  N    +A + FN M L G E     F   I  C+    L   RQLH+Q++  G
Sbjct: 396 MISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLG 455

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
            D   ++   ++  Y++CG +E A  +F  M    D VSW +MI+   Q+G    A+  +
Sbjct: 456 HDSTLSVGNAMITMYARCGIVEAARTMFLTM-PFVDPVSWNSMIAALGQHGHGVKAIELY 514

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------LLNAYV 424
            QM +EG+ P+  T+  +L+A       +       +  E ++ +         +++ + 
Sbjct: 515 EQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE-NYGIAPGEDHYARMIDLFC 573

Query: 425 KKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           + G   +A  V + +  E     W A+LAG    G+ +  ++   +L
Sbjct: 574 RAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKL 620


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/578 (40%), Positives = 360/578 (62%), Gaps = 21/578 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + + I  CA +K L  AR++H+ +  +    D  +   L+  Y KCG + +A K+F
Sbjct: 50  TPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVF 109

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             MR  KD+VSWT++I+G+ QN   + A+     M +   +PNGFT++ +L A  A +  
Sbjct: 110 DEMRR-KDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADS 168

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA  +K ++ +   VG+ALL+ Y + G++D A  VF+ +D K+ V+W+A+++G+
Sbjct: 169 GIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ GD E A+  + ++   G +   FT+SSV ++  A   A+EQGK  HA  IK++    
Sbjct: 229 ARKGDGETALMTFAEMLRNGFEATHFTYSSVFSS-IARLGALEQGKWVHAHMIKSRQKMT 287

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
               + L+ MY+K G++  A +VF R   +DLV+WN+M+  +AQ+G  K+A+  F+EMR+
Sbjct: 288 AFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  + +TF+ ++TAC+H GLV EG++YF++M  E+ + P ++H+  +V L  RAG+L 
Sbjct: 348 SGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHFVTVVALLGRAGLLN 406

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
            A+  I +MP   +A VW  +LAACR+                L P DS   VLL N+YA
Sbjct: 407 FALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYA 466

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +TG W   ARVR++M    VKKE   SW+E++N  + F+A D +HP++ +IY    ++S 
Sbjct: 467 STGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISK 526

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           +++  GY PD  YVL  +DD+ +EA L  HSE+LA+AF L+  PAGA ++I+KN+R+CGD
Sbjct: 527 KIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGD 586

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH+  K ISK+  R+IVVRDTNRFHHF  G CSC DYW
Sbjct: 587 CHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 7/298 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R+VH     S FA D  +  SL+ LY +  +V + R+VFD+M   ++VSWTSL++GYA+
Sbjct: 70  ARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQ 129

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVV 213
           N M +  + L   M     KPN FTF+++L   G  AD GI     Q+H + +K      
Sbjct: 130 NDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGI---GRQIHALAVKCDWHED 186

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +AL+ MY +  M+  A AVFD ++ ++ ++WN++++G+        A  TF  M  
Sbjct: 187 VYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLR 246

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E T  T+ SV    A    L   + +H+ ++K+           L+  Y+K G M D
Sbjct: 247 NGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMID 306

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           A K+F  + + KD+V+W  M++   Q G    AV+ F +M + G+  N  T+  ILTA
Sbjct: 307 ARKVFDRVDD-KDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTA 363



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 186/412 (45%), Gaps = 48/412 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +++ V +  L+  Y ++ + +EA+ L  G+ +      G T +S+LK  G  
Sbjct: 106 RKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAH 165

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GRQ+H   VK  +  DV V ++L+D+Y R   ++    VFD ++  N VSW +L+
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALI 225

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG+AR    +  L  F  M   G +   FT+S+V   +A  G +     VH  +IK+  +
Sbjct: 226 SGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQK 285

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +     N L+ MY KS  + DAR VFD ++D+D +TWN+M+  +    L  EA   F  M
Sbjct: 286 MTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEM 345

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G  L + TF+ ++  C+           H  ++K G                     
Sbjct: 346 RKSGIYLNQVTFLCILTACS-----------HGGLVKEG--------------------- 373

Query: 332 EDASKIFSMMREM---KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
               + F MM+E     ++  +  +++   + G ++ A+ F  +M    + P    +  +
Sbjct: 374 ---KRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMP---IEPTAAVWGAL 427

Query: 389 LTA-----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           L A        V  F    H+ + + + S      L N Y   G  D AA+V
Sbjct: 428 LAACRMHKNAKVGQFAAD-HVFELDPDDS-GPPVLLYNIYASTGQWDAAARV 477


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/764 (34%), Positives = 404/764 (52%), Gaps = 66/764 (8%)

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +++ V  W SL+  Y  N   ++ L  F  M      P+++TF  V     +   V    
Sbjct: 88  SDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGD 147

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
             H +    G      V NAL++MY +   + DAR VFD M   D ++WNS++  Y    
Sbjct: 148 SSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLG 207

Query: 260 LHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLH-----SQVLKN---- 309
               A E F+ M    G      T V+V+  CA+     L +Q H     S++++N    
Sbjct: 208 KPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVG 267

Query: 310 GIDFDHNIRTGLM----------------------VAYSKCGKMEDASKIFSMMREMK-- 345
               D   + G+M                        YS+ G+ EDA ++F  M+E K  
Sbjct: 268 NCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIK 327

Query: 346 -DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
            DVV+W+A ISG+ Q G    A+    QM   G++PN  T   +L+   +V       ++
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387

Query: 401 HAHIIK-------TNYEKSFSVGTALLNAYVKKGILDEAAKVFELID--EKDIVAWSAML 451
           H + IK         +     V   L++ Y K   +D A  +F+ +   E+D+V W+ M+
Sbjct: 388 HCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMI 447

Query: 452 AGYAQIGDTEGAVKIYRQLTSEG--VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            GY+Q GD   A+++  ++  E    +PN FT S  + AC A  AA+  GKQ HA +++ 
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC-ASLAALSIGKQIHAYALRN 506

Query: 510 KLNNA-LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           + N   L VS+ L+ MY+K G+I  A  VF    +++ V+W S++ GY  HG+ ++AL +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGI 566

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EMRR   + DG+T + V+ AC+H+G++D+G +YF+ M  +  + P  EHY+C+VDL  
Sbjct: 567 FEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLG 626

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           RAG L  A+ +I  MP      VW  +L+ CR+                L  ++   Y L
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTL 686

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSNMYA  G W++  R+R LM  + +KK  G SW+E    T +F  GD +HP + +IY  
Sbjct: 687 LSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 746

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L +   R+KD GY P+T + L D+DDE K+ +L +HSE+LA+A+G++ TP GA ++I KN
Sbjct: 747 LSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKN 806

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCHT    +S++   +I++RD++RFHHFK GLCSC  YW
Sbjct: 807 LRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 237/525 (45%), Gaps = 58/525 (11%)

Query: 33  SLFDRSPQRN--FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           SL  R P  +     +N L+  Y  +    + L+ F  +  L       T   V K CG 
Sbjct: 80  SLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGE 139

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +     G   H     +GF  +V V  +LV +Y R  ++ D R+VFD+M   +VVSW S+
Sbjct: 140 ISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSI 199

Query: 151 LSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +  YA+       LE+F +M  E G +P+  T   VL   A  G  +   Q H   + + 
Sbjct: 200 IESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTS- 258

Query: 210 GEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA-------------- 253
            E++ +  V N L+ MY K  M+ +A  VF  M  +D ++WN+MVA              
Sbjct: 259 -EMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRL 317

Query: 254 ---------------------GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
                                GY    L  EA      M  +G +    T +SV+  CA+
Sbjct: 318 FEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377

Query: 293 TKELRLARQLHSQVLKNGIDFDHN-------IRTGLMVAYSKCGKMEDASKIF-SMMREM 344
              L   +++H   +K  +D   N       +   L+  Y+KC K++ A  +F S+  + 
Sbjct: 378 VGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKE 437

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTAQPAVSPF---- 398
           +DVV+WT MI G+ Q+G  + A+    +M  E    RPN FT S  L A  +++      
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGK 497

Query: 399 QVHAHIIKTNYEK-SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           Q+HA+ ++         V   L++ Y K G + +A  VF+ + EK+ V W++++ GY   
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMH 557

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           G  E A+ I+ ++   G K +  T   V+ AC+  S  ++QG ++
Sbjct: 558 GYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSH-SGMIDQGMEY 601



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 215/477 (45%), Gaps = 59/477 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGC 90
           + +FD  P  + V +N ++  Y +    + AL +F  +    G      TL +VL  C  
Sbjct: 182 RKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCAS 241

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR------TNNV--------------- 129
           +     G+Q H   V S   +++ V   LVD+Y +       N V               
Sbjct: 242 VGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAM 301

Query: 130 ----------EDGRRVFDDMNES----NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
                     ED  R+F+ M E     +VV+W++ +SGYA+  +    L +  +M   GI
Sbjct: 302 VAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVI-------KNGGEVVTSVCNALISMYLKSK 228
           KPN  T  +VL   A  G +    ++H   I       KNG      V N LI MY K K
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCK 421

Query: 229 MVRDARAVFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
            V  ARA+FD +  ++RD +TW  M+ GY  +    +A E  + M     +   + F   
Sbjct: 422 KVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481

Query: 287 IKL--CATTKELRLARQLHSQVLKNGID-FDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
             L  CA+   L + +Q+H+  L+N  +     +   L+  Y+KCG + DA  +F  M E
Sbjct: 482 CALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMME 541

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQV 400
            K+ V+WT++++G+  +G  + A+  F +M R G + +G T  ++L A      +     
Sbjct: 542 -KNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600

Query: 401 HAHIIKTNYEKSFSVG----TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLA 452
           + + +KT++    S G      L++   + G L+ A ++ E +  E   V W A+L+
Sbjct: 601 YFNRMKTDF--GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLS 655



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 169/319 (52%), Gaps = 17/319 (5%)

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           I  C T  +++L   +H ++L  GI    N+ + L+  Y   G +  A    S++R    
Sbjct: 35  IHKCKTISQVKL---IHQKLLSFGI-LTLNLTSHLISTYISLGCLSHA---VSLLRRFPP 87

Query: 347 ----VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV-- 400
               V  W ++I  +  NG  +  ++ FC M      P+ +T+  +  A   +S  +   
Sbjct: 88  SDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGD 147

Query: 401 --HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
             HA    T +  +  VG AL+  Y + G L +A KVF+ +   D+V+W++++  YA++G
Sbjct: 148 SSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLG 207

Query: 459 DTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
             + A++++ ++T+E G +P++ T  +V+  C A       GKQFH  ++ +++   + V
Sbjct: 208 KPKMALEMFSKMTNEFGFRPDDITLVNVLPPC-ASVGTRSLGKQFHGFAVTSEMIQNMFV 266

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            + LV MY+K G ++ A+ VF     +D+VSWN+M+ GY+Q G  + A+ +F++M+ + +
Sbjct: 267 GNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKI 326

Query: 578 EFDGITFIGVITACTHAGL 596
           + D +T+   I+     GL
Sbjct: 327 KMDVVTWSAAISGYAQRGL 345



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 35/351 (9%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           + + V ++  +  Y +  L  EAL +   +   G+     TL SVL  C  +   + G++
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386

Query: 100 VHCECVK-------SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN--ESNVVSWTSL 150
           +HC  +K       +G   +  V   L+D+Y +   V+  R +FD ++  E +VV+WT +
Sbjct: 387 IHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVM 446

Query: 151 LSGYARNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           + GY+++   ++ LEL   M  E    +PN+FT S  L   A    ++   Q+H   ++N
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRN 506

Query: 209 GGEVVT-SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
               V   V N LI MY K   + DAR VFD M +++ +TW S++ GY  +    EA   
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGI 566

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA--- 324
           F  M   G +L   T + V+  C+           HS ++  G+++ + ++T   V+   
Sbjct: 567 FEEMRRIGFKLDGVTLLVVLYACS-----------HSGMIDQGMEYFNRMKTDFGVSPGP 615

Query: 325 ---------YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                      + G++  A ++   M      V W A++S    +G ++L 
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELG 666



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 37/332 (11%)

Query: 386 SIILTAQPAVSPFQVHA----HIIKTNYEKSFSVGTALLN-------AYVKKGILDEAAK 434
           S+  T+   ++P  +H       +K  ++K  S G   LN        Y+  G L  A  
Sbjct: 21  SLFSTSALEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISLGCLSHAVS 80

Query: 435 VFELIDEKD--IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
           +       D  +  W++++  Y   G     +  +  + S    P+ +TF  V  AC   
Sbjct: 81  LLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEI 140

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           S+ V  G   HA S      + + V +ALV MYS+ G++  A +VF      D+VSWNS+
Sbjct: 141 SS-VRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSI 199

Query: 553 ICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           I  YA+ G  K ALE+F +M  +     D IT + V+  C   G    G+Q+    V   
Sbjct: 200 IESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSE 259

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAI 671
            I   M   +C+VD+Y++ GM+++A  + + MP       W  ++A              
Sbjct: 260 MI-QNMFVGNCLVDMYAKFGMMDEANTVFSNMP-VKDVVSWNAMVAG------------- 304

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
                  Y+  G +++  R+ + M + K+K +
Sbjct: 305 -------YSQIGRFEDAVRLFEQMQEEKIKMD 329


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/650 (37%), Positives = 378/650 (58%), Gaps = 36/650 (5%)

Query: 222 SMY--LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           +MY  L  +  RDAR +FDGM +R+ +TW ++V GY  N       E F  M   G   +
Sbjct: 79  AMYVPLLHRAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS 138

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             T  + +  C  + ++ L +Q+H   +K G +   ++   L   Y+K G ++ A + F 
Sbjct: 139 HYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 198

Query: 340 MMREMKDVVSWTAMISGHLQNG-AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
            + E K+V++WT MIS   ++   ++L ++ F  M  +GV PN FT + +++        
Sbjct: 199 RIPE-KNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDL 257

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               QV A   K   E +  V  + +  Y++KG  DEA ++FE +++  I+ W+AM++GY
Sbjct: 258 NLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGY 317

Query: 455 AQIGDTEG-----------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           AQI D+             A+ I+R L    +KP+ FTFSS+++ C+A   A+EQG+Q H
Sbjct: 318 AQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSA-MMALEQGEQIH 376

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A +IK+   + + V+SALV MY+K G I+ A++ F     R  V+W SMI GY+QHG  +
Sbjct: 377 AQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 436

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +A+++F+EMR   +  + ITF+ +++AC++AGLV+E + YFD+M  E+ I P ++HY CM
Sbjct: 437 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCM 496

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
           +D++ R G +E A   I R  F  +  +W +++A CR              L+ L+P   
Sbjct: 497 IDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGI 556

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             Y+LL NMY +T  WQ+ ARVRKLM    V      SWI +K+K Y F A D +HPQ+ 
Sbjct: 557 ETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQAT 616

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI--LSQHSERLAIAFGLVATPAGA 787
           ++Y  LE L  + K  GY+P  +  L D +D+ K A   L  HSERLA+A GL+ TP GA
Sbjct: 617 ELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGA 676

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
            +++ KN+ +C DCH+ IKL S LE R+I+VRD+ R H FK+G CSCGD+
Sbjct: 677 TVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 227/453 (50%), Gaps = 18/453 (3%)

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
           D RR+FD M E NVV+WT+L++GY  N      LE+F  M   G  P+ +T    L    
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
               V    QVH   IK G E +TS+ N+L S+Y K   +  A   F  + +++ ITW +
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 251 MVAGYVTNELHME-AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           M++    +E  +E     F +M + G      T  SV+ LC T  +L L +Q+ +   K 
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ---NGAIDL- 365
           G + +  ++   M  Y + G+ ++A ++F  M E   +++W AMISG+ Q   +   DL 
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQ 329

Query: 366 -------AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
                  A+  F  + R  ++P+ FT+S IL+   A+       Q+HA  IK+ +     
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V +AL+N Y K G + +A K F  +  +  V W++M++GY+Q G  + A++++ ++   G
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           V+PNE TF S+++AC+      E    F     +  +   +     ++ M+ + G +E A
Sbjct: 450 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 509

Query: 535 SEVFKRQR-KRDLVSWNSMICGYAQHGHTKKAL 566
               KR   + +   W+S++ G   HG+ + A 
Sbjct: 510 FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAF 542



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 227/479 (47%), Gaps = 52/479 (10%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           ++  + LFD  P+RN V +  L+  Y  +S     L +F+ +  +G      TL + L  
Sbjct: 89  ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 148

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C    D   G+QVH   +K G     ++  SL  LY +  +++   R F  + E NV++W
Sbjct: 149 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 208

Query: 148 TSLLSGYARNKMNDRV-LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           T+++S  A ++    + + LF  M ++G+ PN FT ++V+ +      +    QV     
Sbjct: 209 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 268

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT------NEL 260
           K G E    V N+ + +YL+     +A  +F+ MED   ITWN+M++GY        ++L
Sbjct: 269 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 328

Query: 261 H-----MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                  +A   F ++  +  +    TF S++ +C+    L    Q+H+Q +K+G   D 
Sbjct: 329 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV 388

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y+KCG ++DA+K F  M   +  V+WT+MISG+ Q+G    A+  F +M  
Sbjct: 389 VVNSALVNMYNKCGCIQDANKAFLEM-PTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRL 447

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            GVRPN  T+                                +LL+A    G+++EA   
Sbjct: 448 AGVRPNEITF-------------------------------VSLLSACSYAGLVEEAEHY 476

Query: 436 FELIDEKDIVA-----WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           F+++ ++  +      +  M+  + ++G  E A    ++    G +PNE  +SS++  C
Sbjct: 477 FDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAGC 532



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 132/263 (50%), Gaps = 20/263 (7%)

Query: 11  INPQTKQPPKSLRSPFYSKKDQS-----LFDRSPQRNFVEYNRLLFEYC------RDSLH 59
           I  +T  P K+     Y +K ++     LF++    + + +N ++  Y       +D L 
Sbjct: 270 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329

Query: 60  Q-----EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
                 +AL +F  ++R  +     T SS+L  C  +     G Q+H + +KSGF  DV 
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
           V+++LV++Y +   ++D  + F +M     V+WTS++SGY+++      ++LF  M++ G
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDA 233
           ++PN  TF ++L   +  G+V  A     M+ K    E V      +I M+++   V DA
Sbjct: 450 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 509

Query: 234 RAVFD--GMEDRDSITWNSMVAG 254
            +     G E  ++I W+S+VAG
Sbjct: 510 FSFIKRTGFEPNEAI-WSSLVAG 531


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/577 (40%), Positives = 361/577 (62%), Gaps = 21/577 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + S+I  CA  + L  AR +H+ +  +       +   L+  Y KCG + DA ++F
Sbjct: 63  TPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVF 122

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M   +D+ SWT++I+G+ QN   D A+     M R   +PNGFT++ +L A  A +  
Sbjct: 123 DGM-PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS 181

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA  +K ++     VG+ALL+ Y + G +D A  VF+ ++ K+ V+W+A++AG+
Sbjct: 182 GIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGF 241

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ GD E  + ++ ++   G +   FT+SSV +A  A   A+EQGK  HA  IK+    +
Sbjct: 242 ARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSA-IAGIGALEQGKWVHAHMIKSGERLS 300

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V + ++ MY+K G++  A +VF R  K+D+V+WNSM+  +AQ+G  ++A+  F+EMR+
Sbjct: 301 AFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRK 360

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  + ITF+ ++TAC+H GLV EG+QYFD+M  E+++ P ++HY  +VDL  RAG+L 
Sbjct: 361 CGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLN 419

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
            A+  I +MP   +A VW  +L +CR+                L P D+   VLL N+YA
Sbjct: 420 DALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYA 479

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +TG W   ARVRK+M    VKKE   SW+E++N  + F+A D +HP+S +IY K EE+S 
Sbjct: 480 STGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISI 539

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           +++ AGY P+T YVL  +D++ ++A L  HSE++A+AF L+  P GA ++I+KN+R+CGD
Sbjct: 540 QIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGD 599

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           CH+  + ISK+ +R+IVVRDTNRFHHF  G CSCGDY
Sbjct: 600 CHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 174/360 (48%), Gaps = 6/360 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R +H     S FA  V +  SL+ LY +   V D RRVFD M   ++ SWTSL++GYA+N
Sbjct: 84  RAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQN 143

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
            M D  L L   M     KPN FTF+++L             Q+H + +K        V 
Sbjct: 144 DMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVG 203

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           +AL+ MY +   +  A AVFD +E ++ ++WN+++AG+            F  M   G E
Sbjct: 204 SALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 263

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
            T  T+ SV    A    L   + +H+ ++K+G      +   ++  Y+K G M DA K+
Sbjct: 264 ATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKV 323

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPA 394
           F  + + KDVV+W +M++   Q G    AV  F +M + GV  N  T+  ILTA      
Sbjct: 324 FDRV-DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL 382

Query: 395 VSPFQVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEA-AKVFELIDEKDIVAWSAMLA 452
           V   + +  ++K  N E        +++   + G+L++A   +F++  +     W A+L 
Sbjct: 383 VKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLG 442



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 156/323 (48%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R+   +  L+  Y ++ +  EAL L  G+ R      G T +S+LK  G  
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGAS 178

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H   VK  +  DV V ++L+D+Y R   ++    VFD +   N VSW +L+
Sbjct: 179 ASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALI 238

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    +  L +F  MQ  G +   FT+S+V   +A  G +     VH  +IK+G  
Sbjct: 239 AGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGER 298

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N ++ MY KS  + DAR VFD ++ +D +TWNSM+  +    L  EA   F  M
Sbjct: 299 LSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G  L + TF+S++  C+    ++  +Q    + +  ++ + +    ++    + G +
Sbjct: 359 RKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLL 418

Query: 332 EDASKIFSMMREMKDVVSWTAMI 354
            DA      M        W A++
Sbjct: 419 NDALVFIFKMPMKPTAAVWGALL 441


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/554 (42%), Positives = 362/554 (65%), Gaps = 20/554 (3%)

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H+Q+++ G+  D      LM  YSKCG +E A K+F  M  ++ +VSW  M+  H QNG 
Sbjct: 70  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEM-PVRSLVSWNTMVGSHTQNGD 128

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
            + A+  F QM +EG   + FT S ++ A  A        Q+H   +KT  + +  VGTA
Sbjct: 129 CEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTA 188

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           LL+ Y K G++ +A  VFE + E+  V WS+M+AGY Q    E A+ ++ +  + G++ N
Sbjct: 189 LLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHN 248

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           +FT SS ++AC A +A +E GKQ  A S K  + + + V S+L+ MY+K G IE A  VF
Sbjct: 249 QFTISSALSACAARAALIE-GKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 307

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
               ++++V WN+++ G+++H  + +A+  F++M++  +  + IT+I V++AC+H GLV+
Sbjct: 308 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 367

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +G++YFD+M+  H++ P + HYSCMVD+  RAG+L +A D I+RMPF A+A++W ++LA+
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 427

Query: 659 CR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           CR              L  ++PH++  +VLLSN+YAA   W+E AR R L+ + K KKE 
Sbjct: 428 CRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKER 487

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           G SWIE+K+K +SF+ G+ +HP+  +IY KLE+L   +K  GYK  T + L D+++  K+
Sbjct: 488 GKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQ 547

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
            +L  HSE+LA+ FG++  P GAP++I+KNLR+CGDCH+ +KL S +  R+I+VRDTNRF
Sbjct: 548 ELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRF 607

Query: 825 HHFKEGLCSCGDYW 838
           HHFK G CSCG++W
Sbjct: 608 HHFKNGYCSCGEFW 621



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 161/295 (54%), Gaps = 1/295 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G   H + ++ G   D   S  L+++Y +   VE  R++FD+M   ++VSW +++  + +
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N   ++ L LF +MQ EG   + FT S+V+   A +  V    Q+H   +K   +    V
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ +Y K  +V+DA  VF+ M +R  +TW+SMVAGYV NEL+ EA   F+     G 
Sbjct: 186 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  + T  S +  CA    L   +Q+ +   K GI  +  + + L+  Y+KCG +E+A  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +FS + E K+VV W A++SG  ++     A+ +F +M + G+ PN  TY  +L+A
Sbjct: 306 VFSSVEE-KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSA 359



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 148/266 (55%), Gaps = 12/266 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           + LFD  P R+ V +N ++  + ++   ++AL LF+ +++ G      T+SSV+  C   
Sbjct: 102 RKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAK 161

Query: 90  -CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            C+F+    +Q+H   +K+    +V V T+L+D+Y +   V+D   VF+ M E + V+W+
Sbjct: 162 CCVFE---CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWS 218

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S+++GY +N++ +  L LFHR Q  G++ N FT S+ L   A    +    QV  +  K 
Sbjct: 219 SMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKT 278

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA---F 265
           G      V ++LI MY K  ++ +A  VF  +E+++ + WN++++G+  +   +EA   F
Sbjct: 279 GIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYF 338

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCA 291
           E    MG+   ++   T++SV+  C+
Sbjct: 339 EKMQQMGICPNDI---TYISVLSACS 361



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 142/267 (53%), Gaps = 3/267 (1%)

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           + A+     HA II+            L+N Y K G+++ A K+F+ +  + +V+W+ M+
Sbjct: 61  RAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMV 120

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
             + Q GD E A+ ++ Q+  EG   +EFT SSV+ AC A     E  KQ H  ++K  L
Sbjct: 121 GSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFE-CKQLHGFALKTAL 179

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           ++ + V +AL+ +Y+K G ++ A+ VF+   +R  V+W+SM+ GY Q+   ++AL +F  
Sbjct: 180 DSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 239

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
            +   LE +  T    ++AC     + EG+Q   +      I   +   S ++D+Y++ G
Sbjct: 240 AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKT-GIGSNIFVISSLIDMYAKCG 298

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAA 658
           ++E+A  + + +    +  +W  +L+ 
Sbjct: 299 IIEEAYTVFSSVE-EKNVVLWNAILSG 324



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 121/229 (52%), Gaps = 7/229 (3%)

Query: 30  KDQSL-FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           KD +L F+  P+R+ V ++ ++  Y ++ L++EAL LF   + +GL     T+SS L  C
Sbjct: 200 KDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSAC 259

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                 + G+QV     K+G   ++ V +SL+D+Y +   +E+   VF  + E NVV W 
Sbjct: 260 AARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWN 319

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK- 207
           ++LSG++R+  +   +  F +MQ  GI PN  T+ +VL   +  G+V    +   ++I+ 
Sbjct: 320 AILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRV 379

Query: 208 --NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
                 V+   C  ++ +  ++ ++ +A+   D M  D  +  W S++A
Sbjct: 380 HNVSPNVLHYSC--MVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 426



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           ++L   G++    +    +   +A + A  +G   HA  I+  L      S+ L+ MYSK
Sbjct: 35  KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 94

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +ESA ++F     R LVSWN+M+  + Q+G  +KAL +F +M+++       T   V
Sbjct: 95  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 154

Query: 588 ITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + AC     V E +Q     +    + +++      + ++D+Y++ G+++ A  +   MP
Sbjct: 155 VCACAAKCCVFECKQLHGFALKTALDSNVFVG----TALLDVYAKCGLVKDANLVFECMP 210

Query: 645 FAASATVWRTVLAA 658
             +  T W +++A 
Sbjct: 211 ERSDVT-WSSMVAG 223


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 269/766 (35%), Positives = 403/766 (52%), Gaps = 106/766 (13%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G KPN+F  + ++ +      +  A ++   + K   ++V      L+S Y  S  V+ A
Sbjct: 35  GFKPNTFILNRLINIYCKSSNITYARKLFDKIPKP--DIVAR--TTLLSAYSSSGNVKLA 90

Query: 234 RAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK-LC 290
           + +F+   +  RD++++N+M+  Y        A   F  M   G      TF SV+  L 
Sbjct: 91  QQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALS 150

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK---------MEDASKIFS-- 339
               E R  + LH +V+K G     ++   L+  Y  C           M  A K+F   
Sbjct: 151 LIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDET 210

Query: 340 ------------------------MMREMKDV------VSWTAMISGHLQNGAIDLAVNF 369
                                     RE+ D       V+W AMISG+++ G  + A + 
Sbjct: 211 PKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDT 270

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSP--------FQVHAHIIKTNYEKS----FSVGT 417
           F +M   G++ + +TY+ +++A  + +          QVH +I++T  E S     SV  
Sbjct: 271 FRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNN 330

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY----------------------- 454
           AL+  Y K   + EA +VF+ +  +DI++W+A+L+GY                       
Sbjct: 331 ALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLT 390

Query: 455 --------AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
                   AQ G  E  +K++ Q+ SEG++P ++ F+  I AC+    +++ G+Q H+  
Sbjct: 391 WTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSV-LGSLDNGQQIHSQV 449

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           I+   ++ L   +AL+TMYS+ G +ESA  VF      D VSWN+MI   AQHGH  KA+
Sbjct: 450 IRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAI 509

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           E+F++M ++D+  D ITF+ ++TAC HAGL+ EG+ YFD M   + I P  +HY+ ++DL
Sbjct: 510 ELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDL 569

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
             RAGM  KA  +I  MPF A A +W  +LA CR              L+ L P     Y
Sbjct: 570 LCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTY 629

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           ++LSNMYAA G W E ARVR LM +R VKKE G SW+EV+N  + FL  D  HP+   +Y
Sbjct: 630 IILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVY 689

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           + L++L   +K  GY PDT +VL D++ EHKE  LS HSE+LA+ +G++  P GA +++ 
Sbjct: 690 TYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVF 749

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+CGDCH   K ISK+  R+IVVRD  RFHHFK G CSCG+YW
Sbjct: 750 KNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 256/596 (42%), Gaps = 125/596 (20%)

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            +  R VH   + SGF  +  +   L+++Y +++N+   R++FD + + ++V+ T+LLS 
Sbjct: 21  QIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSA 80

Query: 154 YAR------------------------NKM-------ND--RVLELFHRMQVEGIKPNSF 180
           Y+                         N M       ND    L LF +M+  G  P+ F
Sbjct: 81  YSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPF 140

Query: 181 TFSTVLGVL---ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL---------KSK 228
           TFS+VL  L   ADE        +H  VIK G  ++ SV NAL+S Y+          S+
Sbjct: 141 TFSSVLSALSLIADEE--RHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQ 198

Query: 229 MVRDARAVF---------------------------------DGMEDRDSITWNSMVAGY 255
           ++  AR VF                                 DG+     + WN+M++GY
Sbjct: 199 LMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGY 258

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE----LRLARQLHSQVLKNGI 311
           V   L+ EAF+TF  M   G +    T+ S+I  C +  E        RQ+H  +L+  +
Sbjct: 259 VRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVV 318

Query: 312 DFDHN----IRTGLMVAYSKCGKM-------------------------------EDASK 336
           +  H+    +   L+  Y+K  +M                               E+A+ 
Sbjct: 319 EPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANS 378

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           IFS M E ++V++WT MISG  QNG  +  +  F QM  EG+ P  + ++  +TA   + 
Sbjct: 379 IFSEMPE-RNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLG 437

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q+H+ +I+  ++   S G AL+  Y + G+++ A  VF  +   D V+W+AM+A
Sbjct: 438 SLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIA 497

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
             AQ G    A++++ Q+  E + P+  TF +++ AC       E    F     +  + 
Sbjct: 498 ALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGIT 557

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALE 567
                 + L+ +  + G    A  V K    +     W +++ G   HG+ +  ++
Sbjct: 558 PGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQ 613



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 222/527 (42%), Gaps = 91/527 (17%)

Query: 29  KKDQSLFDRSPQ--RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           K  Q LF+ +P   R+ V YN ++  Y   +    ALNLF+ ++R G      T SSVL 
Sbjct: 88  KLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLS 147

Query: 87  TCGCLFDHVFGRQ-VHCECVKSGFARDVNVSTSLVDLYM---------RTNNVEDGRRVF 136
               + D     Q +HCE +K G     +V+ +L+  Y+          +  +   R+VF
Sbjct: 148 ALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVF 207

Query: 137 DDMNESNV---------------------------------VSWTSLLSGYARNKMNDRV 163
           D+  ++ +                                 V+W +++SGY R  + +  
Sbjct: 208 DETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEA 267

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLAD----EGIVATAVQVHTMVIKNGGE----VVTS 215
            + F RM   GI+ + +T+++++          G+     QVH  +++   E     V S
Sbjct: 268 FDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLS 327

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT------------------ 257
           V NALI+ Y K   + +AR VFD M  RD I+WN++++GYV                   
Sbjct: 328 VNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERN 387

Query: 258 -------------NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
                        N    E  + FN M   G E     F   I  C+    L   +Q+HS
Sbjct: 388 VLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHS 447

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           QV++ G D   +    L+  YS+CG +E A  +F  M  + D VSW AMI+   Q+G   
Sbjct: 448 QVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYV-DSVSWNAMIAALAQHGHGV 506

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK-SFSVG----TAL 419
            A+  F QM +E + P+  T+  ILTA       +   H   T   +   + G      L
Sbjct: 507 KAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARL 566

Query: 420 LNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVK 465
           ++   + G+  +A  V + +  E     W A+LAG    G+ E  ++
Sbjct: 567 IDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQ 613



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A  ++  + + G KPN F  + +IN     S      K F            +   + L+
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIP-----KPDIVARTTLL 78

Query: 523 TMYSKKGNIESASEVFKRQ--RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           + YS  GN++ A ++F       RD VS+N+MI  Y+       AL +F +M+R     D
Sbjct: 79  SAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPD 138

Query: 581 GITFIGVITA 590
             TF  V++A
Sbjct: 139 PFTFSSVLSA 148


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/667 (36%), Positives = 392/667 (58%), Gaps = 32/667 (4%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH  V+K G      V + L+++Y K   + DAR VF+ M  R+ + W +++ G+V N  
Sbjct: 86  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQ 145

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
              A   F  M  AG+  +  T  +V+  C++ + L+L  Q H+ ++K  +DFD ++ + 
Sbjct: 146 PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSA 205

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L   YSKCG++EDA K FS +RE K+V+SWT+ +S    NGA    +  F +M  E ++P
Sbjct: 206 LCSLYSKCGRLEDALKAFSRIRE-KNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKP 264

Query: 381 NGFTYSIILTAQPAVSPFQVHAHI----IKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N FT +  L+    +   ++   +    IK  YE +  V  +LL  Y+K G + EA + F
Sbjct: 265 NEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFF 324

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDT-----------EGAVKIYRQLTSEGVKPNEFTFSSV 485
             +D+  +V W+AM+AG+AQ+ +              A+KI+ +L   G+KP+ FT SSV
Sbjct: 325 NRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSV 384

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           ++ C+    A+EQG+Q HA +IK    + + VS++L++MY+K G+IE AS+ F     R 
Sbjct: 385 LSVCSR-MLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRT 443

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           +++W SMI G++QHG +++AL +F++M    +  + +TF+GV++AC+HAG+V +   YF+
Sbjct: 444 MIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFE 503

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----- 660
           IM  ++ I P M+HY CMVD++ R G LE+A++ I +M +  S  +W   +A CR     
Sbjct: 504 IMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNL 563

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    L+SL+P D   YVLL NMY +   + + +RVRK+M   KV K   +SWI +
Sbjct: 564 ELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISI 623

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILS-QH 770
           K+K YSF   D +HP S+ I   LE+L  + K+ GY+   S  + D ++E K +  +  H
Sbjct: 624 KDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYH 683

Query: 771 SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           SE+LAI FGL   P  +P+++VK+  +C D H  IK +S L  R+I+V+D+ R H F  G
Sbjct: 684 SEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNG 743

Query: 831 LCSCGDY 837
            CSCG++
Sbjct: 744 ECSCGNF 750



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 234/478 (48%), Gaps = 17/478 (3%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           VH   +K+G   +  V + LV++Y +  N+ED RRVF++M   NVV+WT+L+ G+ +N  
Sbjct: 86  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQ 145

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
               + +F  M   G  P+ +T S VL   +    +    Q H  +IK   +  TSV +A
Sbjct: 146 PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSA 205

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L S+Y K   + DA   F  + +++ I+W S V+    N   ++    F  M     +  
Sbjct: 206 LCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPN 265

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             T  S +  C     L L  Q+ S  +K G + +  +R  L+  Y K G + +A + F+
Sbjct: 266 EFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFN 325

Query: 340 MMREMKDVVSWTAMISGHLQNGAI-----------DLAVNFFCQMTREGVRPNGFTYSII 388
            M ++  +V+W AMI+GH Q   +             A+  F ++ + G++P+ FT S +
Sbjct: 326 RMDDV-SMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSV 384

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L+    +       Q+HA  IKT +     V T+L++ Y K G ++ A+K F  +  + +
Sbjct: 385 LSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTM 444

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           +AW++M+ G++Q G ++ A+ I+  ++  GV+PN  TF  V++AC+      +    F  
Sbjct: 445 IAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEI 504

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
              K K+   +     +V M+ + G +E A    K+   +     W++ I G   HG+
Sbjct: 505 MQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGN 562



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 226/472 (47%), Gaps = 51/472 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P+RN V +  L+  + ++S  + A+++F  +   G      TLS+VL  C  L  
Sbjct: 121 VFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQS 180

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q H   +K     D +V ++L  LY +   +ED  + F  + E NV+SWTS +S 
Sbjct: 181 LKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSA 240

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
              N    + L LF  M  E IKPN FT ++ L    +   +    QV ++ IK G E  
Sbjct: 241 CGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESN 300

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-----------TNELHM 262
             V N+L+ +YLKS  + +A   F+ M+D   +TWN+M+AG+              +   
Sbjct: 301 LRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGS 360

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EA + F+ +  +G +    T  SV+ +C+    +    Q+H+Q +K G   D  + T L+
Sbjct: 361 EALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLI 420

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+KCG +E ASK F  M   + +++WT+MI+G  Q+G    A++ F  M+  GVRPN 
Sbjct: 421 SMYNKCGSIERASKAFLEM-STRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNT 479

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            T+  +L+A         HA                        G++ +A   FE++ +K
Sbjct: 480 VTFVGVLSACS-------HA------------------------GMVSQALNYFEIMQKK 508

Query: 443 DIVA-----WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             +      +  M+  + ++G  E A+   +++  E   P+EF +S+ I  C
Sbjct: 509 YKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYE---PSEFIWSNFIAGC 557



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 195/370 (52%), Gaps = 20/370 (5%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           +V +++ C   +     + +H  V+K G   +  + + L+  Y+KCG MEDA ++F  M 
Sbjct: 67  YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP 126

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
             ++VV+WT ++ G +QN     A++ F +M   G  P+ +T S +L A  ++       
Sbjct: 127 R-RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGD 185

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q HA+IIK + +   SVG+AL + Y K G L++A K F  I EK++++W++ ++     G
Sbjct: 186 QFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNG 245

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVIN-ACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
                ++++ ++ SE +KPNEFT +S ++  C  PS  +E G Q  +  IK    + L V
Sbjct: 246 APVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPS--LELGTQVCSLCIKFGYESNLRV 303

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK-----------AL 566
            ++L+ +Y K G I  A   F R     +V+WN+MI G+AQ     K           AL
Sbjct: 304 RNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEAL 363

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++F ++ +  ++ D  T   V++ C+    +++G+Q     +    +   +   S ++ +
Sbjct: 364 KIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTS-LISM 422

Query: 627 YSRAGMLEKA 636
           Y++ G +E+A
Sbjct: 423 YNKCGSIERA 432


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/585 (41%), Positives = 363/585 (62%), Gaps = 26/585 (4%)

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AGA   R    +++K C    +L   + +H+ +L +    D  ++  L+  Y+KCG +  
Sbjct: 12  AGA---REICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVY 68

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K+F  M   +DVV+WTA+I+G+ Q+     A+    +M R G++PN FT + +L A  
Sbjct: 69  ARKLFDEMSS-RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAAS 127

Query: 394 AVSPF------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
            V         Q+H   ++  Y+ +  V  A+L+ Y +   L+EA  +F+++  K+ V+W
Sbjct: 128 GVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSW 187

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +A++AGYA+ G  + A  ++  +  E VKP  FT+SSV+ AC A   ++EQGK  HA  I
Sbjct: 188 NALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCAC-ASMGSLEQGKWVHALMI 246

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K        V + L+ MY+K G+IE A +VF R  KRD+VSWNSM+ GY+QHG  K AL+
Sbjct: 247 KWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQ 306

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
            F+EM R  +  + ITF+ V+TAC+HAGL+DEG+ YFD+M  ++++ P + HY  MVDL 
Sbjct: 307 RFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM-KKYNVEPQISHYVTMVDLL 365

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYV 673
            RAG L++A+  I+ MP   +A VW  +L ACR+                L  H    +V
Sbjct: 366 GRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHV 425

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LL N+YA  G W + A+VRK+M +  VKKE   SW+E++N+ + F+A D +HPQ  +I++
Sbjct: 426 LLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHN 485

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
             E++S ++K+ GY PD+S+VL  +D + +EA L  HSE+LA+AF L+ TP G+ ++I K
Sbjct: 486 MWEQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKK 545

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           N+R+CGDCH+  K +SKL  R+I+VRDTNRFHHF +G CSC DYW
Sbjct: 546 NIRICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 205/426 (48%), Gaps = 49/426 (11%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   LFD    R+ V +  L+  Y +    Q+AL L   + R+GL     TL+S+LK
Sbjct: 68  YARK---LFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLK 124

Query: 87  TCGCL--FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
               +   D + GRQ+H  C++ G+  +V VS +++D+Y R +++E+ + +FD M   N 
Sbjct: 125 AASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNE 184

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSW +L++GYAR    D+   LF  M  E +KP  FT+S+VL   A  G +     VH +
Sbjct: 185 VSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHAL 244

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           +IK G ++V  V N L+ MY KS  + DA+ VFD +  RD ++WNSM+ GY  + L   A
Sbjct: 245 MIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVA 304

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            + F  M                              L +++  N I F       ++ A
Sbjct: 305 LQRFEEM------------------------------LRTRIAPNDITF-----LCVLTA 329

Query: 325 YSKCGKMEDASKIFSMMREMK---DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
            S  G +++    F MM++      +  +  M+    + G +D A+ F  +M    ++P 
Sbjct: 330 CSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMP---IKPT 386

Query: 382 GFTYSIILTAQPAVSPFQVHAHIIKTNYE-KSFSVGTALL--NAYVKKGILDEAAKVFEL 438
              +  +L A       ++  +  +  +E  S   GT +L  N Y   G  ++AAKV ++
Sbjct: 387 AAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKM 446

Query: 439 IDEKDI 444
           + E  +
Sbjct: 447 MKESGV 452



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 197/380 (51%), Gaps = 12/380 (3%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           ++LK C  L     G+ +H   + S F  D+ +  +L++LY +  ++   R++FD+M+  
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV--- 199
           +VV+WT+L++GY+++      L L   M   G+KPN FT +++L   A  G+ +T V   
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLK--AASGVGSTDVLQG 137

Query: 200 -QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            Q+H + ++ G +    V  A++ MY +   + +A+ +FD M  ++ ++WN+++AGY   
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               +AF  F+NM     + T  T+ SV+  CA+   L   + +H+ ++K G      + 
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y+K G +EDA K+F  + + +DVVSW +M++G+ Q+G   +A+  F +M R  +
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAK-RDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHII----KTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            PN  T+  +LTA           H      K N E   S    +++   + G LD A +
Sbjct: 317 APNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQ 376

Query: 435 VFELIDEKDIVA-WSAMLAG 453
               +  K   A W A+L  
Sbjct: 377 FISEMPIKPTAAVWGALLGA 396


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 302/916 (32%), Positives = 471/916 (51%), Gaps = 124/916 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGC 90
           + +FD +P  N   +N  L  YCR+   +E L LF L I   G      T+   LK C  
Sbjct: 56  RKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAG 115

Query: 91  LFDHVFGRQVHCECVKSGFAR-------DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           L     G+ +H      GFA+       D+ V ++LV+LY +   + +  +VF++    +
Sbjct: 116 LRMLELGKVIH------GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPD 169

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQV-----------------------EGIKPNSF 180
            V WTS+++GY +N   +  L LF +M +                       E I  N F
Sbjct: 170 TVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLF 229

Query: 181 T---------FSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           +         +ST++   A+      A+ + H M+ K       +V +AL +  + S+ +
Sbjct: 230 SKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAV-SRNL 288

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            + + +      +D ++W ++++GY  N +  ++   F NM   G    +   V+V+K+ 
Sbjct: 289 EEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDG---IQPDAVAVVKIL 345

Query: 291 ATTKELRLARQ---LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           A + EL + +Q   LH  V+++G + +  +   L+  YSKCG + DA K+F  M  ++DV
Sbjct: 346 AASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMI-VRDV 404

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP---------- 397
           V W++MI+ +  +G    A+  F QM +      G T    ++ QP V P          
Sbjct: 405 VIWSSMIAAYGIHGRGGEALEIFDQMIQ---VMQGITSCYQISMQPQVQPPLAITSCTLA 461

Query: 398 ---------FQVHAH---------IIKT------NYEKS--FSVG--------TALLNAY 423
                    F + AH         I  T      +  KS  F+ G        T     Y
Sbjct: 462 THIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMY 521

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP------ 477
           V    +D A+ VFE I       W+ M+ G+A  G    ++++Y ++  +G+KP      
Sbjct: 522 VSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVI 581

Query: 478 -NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
            N  +  SV+ AC     A+ +G+ FH+  I+      + V++A++ MYSK G+++ A  
Sbjct: 582 PNRVSILSVLLAC-GNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 640

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F     +DLV W++MI  Y  HGH +KA+++F +M +  +    +TF  V++AC+H+GL
Sbjct: 641 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 700

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           ++EG+ YF +M  E  I   + +Y+CMVDL  RAG L +A+D+I  MP    A++W ++L
Sbjct: 701 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 760

Query: 657 AACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            ACR              L  L P  +  +VLLSN+YAA   W E  +VRK+M  R   K
Sbjct: 761 GACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 820

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
             G+S +E  N+ + F  GD SHPQ  ++Y+KLEEL+  +K  GY P T +VL DI++E 
Sbjct: 821 IQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEEA 880

Query: 763 KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
           KEA LS HSERLAIAFGL+ T  G  L+I KNLR+CGDCH  IKLISK+  R I+VRD +
Sbjct: 881 KEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDMH 940

Query: 823 RFHHFKEGLCSCGDYW 838
           RFH F++G+CSCGDYW
Sbjct: 941 RFHRFEDGVCSCGDYW 956



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 143/603 (23%), Positives = 257/603 (42%), Gaps = 103/603 (17%)

Query: 5   PALKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALN 64
           P + SL+N   K   + + +        +LF + P+++ + ++ ++  Y  +    EALN
Sbjct: 207 PLVNSLLNLYAKTGCEKIAA--------NLFSKMPEKDVISWSTMIACYANNEAANEALN 258

Query: 65  LFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYM 124
           LF  +          T+ S L+ C                                    
Sbjct: 259 LFHEMIEKRFEPNSVTVVSALQACAV---------------------------------- 284

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
            + N+E+G+++       +VVSW +LLSGYA+N M  + + +F  M  +GI+P++     
Sbjct: 285 -SRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVK 343

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           +L   ++ GI   A+ +H  V+++G      V  +LI +Y K   + DA  +F GM  RD
Sbjct: 344 ILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRD 403

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV---------IKLCA---- 291
            + W+SM+A Y  +    EA E F+ M      +T    +S+         I  C     
Sbjct: 404 VVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATH 463

Query: 292 ------------------------TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
                                    T   + A    S +   G+ +D  I T   + Y  
Sbjct: 464 IPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVS 523

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR-------P 380
             +++ AS +F  +      + W  MI G   +G    ++  + +M  +G++       P
Sbjct: 524 FNRIDAASIVFEDIPNPCSFL-WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIP 582

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N  +   +L A   +   +     H+++I+T +E    V TA+++ Y K G LD A  +F
Sbjct: 583 NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 642

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           +    KD+V WSAM+A Y   G    A+ ++ Q+   GV+P+  TF+ V++AC+  S  +
Sbjct: 643 DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSH-SGLL 701

Query: 497 EQGKQFHACS-----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWN 550
           E+GK +         I  KL+N  C    +V +  + G +  A ++ +    + D   W 
Sbjct: 702 EEGKMYFQLMTEEFVIARKLSNYAC----MVDLLGRAGQLSEAVDLIENMPVEPDASIWG 757

Query: 551 SMI 553
           S++
Sbjct: 758 SLL 760



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 158/623 (25%), Positives = 272/623 (43%), Gaps = 91/623 (14%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H +  K+G   D   +T L  LY +  +++  R+VFD+    NV  W S L  Y R K
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 159 MNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN---GGEVVT 214
             +  L LFH M    G  P++FT    L   A   ++     +H    KN   G ++  
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF- 140

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V +AL+ +Y K   + +A  VF+  +  D++ W SMV GY  N    EA   F+ M + 
Sbjct: 141 -VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199

Query: 275 GAELTRSTFV-SVIKLCATTKELRLARQLHSQVLKNGI---------------------- 311
                    V S++ L A T   ++A  L S++ +  +                      
Sbjct: 200 DCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNL 259

Query: 312 -------DFDHNIRTGLMVAYSKCG---KMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
                   F+ N  T ++ A   C     +E+  KI  +    KDVVSW A++SG+ QNG
Sbjct: 260 FHEMIEKRFEPNSVT-VVSALQACAVSRNLEEGKKIHKIAV-WKDVVSWVALLSGYAQNG 317

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGT 417
               ++  F  M  +G++P+      IL A   +  FQ    +H +++++ +  +  VG 
Sbjct: 318 MAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGA 377

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS--EGV 475
           +L+  Y K G L +A K+F+ +  +D+V WS+M+A Y   G    A++I+ Q+    +G+
Sbjct: 378 SLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGI 437

Query: 476 --------KPNEFTFSSVINACTAPSAAVEQGKQFH--------------------ACSI 507
                   +P +      I +CT  +    + K F+                      + 
Sbjct: 438 TSCYQISMQP-QVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAAD 496

Query: 508 KAKLN---NALCVSSALVT----MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
            +K N     L   S ++T    MY     I++AS VF+         WN MI G+A  G
Sbjct: 497 MSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 556

Query: 561 HTKKALEVFKEMRRQDLEFDG-------ITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
               +LE++ +M  + L+ D        ++ + V+ AC + G + +G+ +   ++     
Sbjct: 557 RFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFE 616

Query: 614 YPTMEHYSCMVDLYSRAGMLEKA 636
           +  +   + M D+YS+ G L+ A
Sbjct: 617 FDILVATAIM-DMYSKCGSLDLA 638



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 50/371 (13%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           +R   V + + C   + +    QLHSQV K GI  D    T L   Y+KC  ++ A K+F
Sbjct: 3   SRQVLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT-REGVRPNGFTYSIILTAQPAVSP 397
                  +V  W + +  + +    +  +  F  M    G  P+ FT  I L A   +  
Sbjct: 60  DETPH-PNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRM 118

Query: 398 FQVHAHI---IKTNYE--KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            ++   I    K N E      VG+AL+  Y K G + EA KVFE     D V W++M+ 
Sbjct: 119 LELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVT 178

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GY Q  D E A+ ++ Q+              V+  C                      +
Sbjct: 179 GYQQNNDPEEALALFSQM--------------VMMDC---------------------FD 203

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             L + ++L+ +Y+K G  + A+ +F +  ++D++SW++MI  YA +    +AL +F EM
Sbjct: 204 GDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEM 263

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
             +  E + +T +  + AC  +  ++EG++   I V     +  +  +  ++  Y++ GM
Sbjct: 264 IEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV-----WKDVVSWVALLSGYAQNGM 318

Query: 633 LEKAMDIINRM 643
             K+M +   M
Sbjct: 319 AYKSMGVFRNM 329



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 176/434 (40%), Gaps = 63/434 (14%)

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+H+ + KT         T L + Y K   L  A KVF+     ++  W++ L  Y +  
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 459 DTEGAVKIYR-QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA-KLNNALC 516
             E  ++++   + + G  P+ FT    + AC A    +E GK  H  + K  ++ + + 
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKAC-AGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V SALV +YSK G +  A +VF+  ++ D V W SM+ GY Q+   ++AL +F +M   D
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDI-MVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
             FDG                       D+ +VN             +++LY++ G  + 
Sbjct: 201 C-FDG-----------------------DLPLVNS------------LLNLYAKTGCEKI 224

Query: 636 AMDIINRMPFAASATVWRTVL-------AACRLISLQPHDSAIYVLLSNMYAATGHWQER 688
           A ++ ++MP       W T++       AA   ++L  H+        N        Q  
Sbjct: 225 AANLFSKMP-EKDVISWSTMIACYANNEAANEALNLF-HEMIEKRFEPNSVTVVSALQAC 282

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
           A  R L   +K+ K      I V     S++A    + Q+   Y  +      L D G +
Sbjct: 283 AVSRNLEEGKKIHK------IAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSD-GIQ 335

Query: 749 PDTSYVLQDIDDEHKEAILSQ----HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
           PD   V++ +    +  I  Q    H   +   F        + +++      CG     
Sbjct: 336 PDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSK---CGSLGDA 392

Query: 805 IKLISKLERRDIVV 818
           +KL   +  RD+V+
Sbjct: 393 VKLFKGMIVRDVVI 406


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/578 (40%), Positives = 359/578 (62%), Gaps = 21/578 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + S+I  CA  K L  AR +H+ + ++ +  D  +   L+  Y KCG + DA  +F
Sbjct: 59  TPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVF 118

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M   +DVVSWT +I+G+ QN     A+     M R   RPNGFT++ +L A  A    
Sbjct: 119 DKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGC 177

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA  +K N+++   VG+ALL+ Y +   +D A  VF+ +  K+ V+W+A++AG+
Sbjct: 178 SIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGF 237

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+  D E  +  + ++   G     FT+SS+ +A  A   A+EQG+  HA  IK+     
Sbjct: 238 ARKADGETTLMKFAEMQRNGFGATHFTYSSMFSA-FARIGALEQGRWVHAHLIKSGQKLT 296

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V + ++ MY+K G++  A +VF R  KRDLV+WN+M+   AQ+G  K+A+  F+E+R+
Sbjct: 297 AFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRK 356

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             ++ + ITF+ V+TAC+H GLV EG+ YFD+M  ++++ P ++HY   VDL  RAG+L+
Sbjct: 357 CGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLK 415

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
           +A+  + +MP   +A VW  +L ACR+                L P D+   VLL N+YA
Sbjct: 416 EALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYA 475

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +TG W + ARVRK+M    VKKE   SW++++N  + F+A D +HP+S  IY   EE++ 
Sbjct: 476 STGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINM 535

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           R+K AGY P+T++VL  I+++ +E  L  HSE++A+AF L+  PAGA ++I+KN+R+CGD
Sbjct: 536 RIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGD 595

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH+  K +SK+ +R+IVVRDTNRFHHF EG CSCGDYW
Sbjct: 596 CHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 173/376 (46%), Gaps = 6/376 (1%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           S++  C    +    R +H    +S  A D  +  SL+ +Y +   V D R VFD M   
Sbjct: 65  SIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSR 124

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +VVSWT L++GYA+N M    + L   M     +PN FTF+++L      G  +   Q+H
Sbjct: 125 DVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMH 184

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
            + +K   +    V +AL+ MY + + +  A  VFD +  ++ ++WN+++AG+       
Sbjct: 185 ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGE 244

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
                F  M   G   T  T+ S+    A    L   R +H+ ++K+G      +   ++
Sbjct: 245 TTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTML 304

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+K G M DA K+F  M + +D+V+W  M++   Q G    AV  F ++ + G++ N 
Sbjct: 305 GMYAKSGSMVDARKVFDRM-DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQ 363

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKT----NYEKSFSVGTALLNAYVKKGILDEAAK-VFE 437
            T+  +LTA       +   H        N +       + ++   + G+L EA   VF+
Sbjct: 364 ITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFK 423

Query: 438 LIDEKDIVAWSAMLAG 453
           +  E     W A+L  
Sbjct: 424 MPMEPTAAVWGALLGA 439



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+ P R+ V +  L+  Y ++ +  EA+ L   + R      G T +S+LK  G  
Sbjct: 115 RHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGAC 174

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H   VK  +  DV V ++L+D+Y R   ++    VFD +   N VSW +L+
Sbjct: 175 GGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALI 234

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    +  L  F  MQ  G     FT+S++    A  G +     VH  +IK+G +
Sbjct: 235 AGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQK 294

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N ++ MY KS  + DAR VFD M+ RD +TWN+M+       L  EA   F  +
Sbjct: 295 LTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEI 354

Query: 272 GLAGAELTRSTFVSVIKLCA 291
              G +L + TF+SV+  C+
Sbjct: 355 RKCGIQLNQITFLSVLTACS 374


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/802 (33%), Positives = 423/802 (52%), Gaps = 95/802 (11%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK-P 177
           +++ Y +   + D   +F  M   +V SW +L+SGY +++     LE F  M   G   P
Sbjct: 97  MLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWP 156

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM-------------- 223
           N+FT +  +      G  + A+Q+  MV K   +  + V  AL+ M              
Sbjct: 157 NAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF 216

Query: 224 -----------------YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
                            Y+K+  V  A  +FD M +RD ++WN MV+    +    EA +
Sbjct: 217 VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 276

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
              +M   G  L  +T+ S +  CA    LR  +QLH+QV++N    D  + + L+  Y+
Sbjct: 277 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYA 336

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G  ++A  +F+ + + ++ V+WT +ISG LQ G    +V  F QM  E +  + F  +
Sbjct: 337 KSGCFKEAKGVFNSLHD-RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 395

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +++   +        Q+H+  +K+   ++  V  +L++ Y K   L  A  +F  ++EK
Sbjct: 396 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK 455

Query: 443 DIVAWSAMLAGYAQIGDT-------------------------------EGAVKIYR-QL 470
           DIV+W++M+  Y+Q+G+                                E  +++Y+  L
Sbjct: 456 DIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVML 515

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
           + E V+P+  T+ ++   C A   A + G Q    ++K  L     V++A++TMYSK G 
Sbjct: 516 SEEYVRPDWVTYVTLFKGC-ADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGR 574

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           I  A +VF     +D+VSWN+MI GY+QHG  K+A+E+F ++ ++  + D I+++ V++ 
Sbjct: 575 ILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 634

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C+H+GLV EG+ YFD+M   H+I P +EH+SCMVDL  RAG L +A D+I+ MP   +A 
Sbjct: 635 CSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAE 694

Query: 651 VWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           VW  +L+AC++                L   DS  Y+L++ +YA  G   + A++RKLM 
Sbjct: 695 VWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMR 754

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           D+ +KK  GYSW+EV NK + F A D+SHPQ   I  KL+EL  ++   GY         
Sbjct: 755 DKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR------- 807

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
              D  +  I   HSE+LA+AFGL+  P   P+ I+KNLR+CGDCHTVIKLIS +  R+ 
Sbjct: 808 --TDSTRSEI--HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREF 863

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           V+RD  RFHHF  G CSCGDYW
Sbjct: 864 VIRDAVRFHHFNGGSCSCGDYW 885



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 277/602 (46%), Gaps = 72/602 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGCLF 92
           LF R P R+   +N L+  Y +   +  +L  FL + R G     + TL+  +K+CG L 
Sbjct: 113 LFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG 172

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDL------------------------------ 122
            H    Q+     K     D  V+ +LVD+                              
Sbjct: 173 WHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLA 232

Query: 123 -YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
            Y++T  V+    +FD M E +VVSW  ++S  +++      L++   MQ +G++ +S T
Sbjct: 233 GYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTT 292

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +++ L   A    +    Q+H  VI+N   +   V +AL+ +Y KS   ++A+ VF+ + 
Sbjct: 293 YTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLH 352

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           DR+++ W  +++G++      E+ E FN M      L +    ++I  C +  +L L RQ
Sbjct: 353 DRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQ 412

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LHS  LK+G      +   L+  Y+KC  ++ A  IF  M E KD+VSWT+MI+ + Q G
Sbjct: 413 LHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNE-KDIVSWTSMITAYSQVG 471

Query: 362 AIDLAVNFF--------------------------------CQMTREGVRPNGFTYSIIL 389
            +  A  FF                                  ++ E VRP+  TY  + 
Sbjct: 472 NVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLF 531

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNA----YVKKGILDEAAKVFELIDEKDIV 445
                +   ++   II    +    + T++ NA    Y K G + EA KVF+ ++ KDIV
Sbjct: 532 KGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIV 591

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AM+ GY+Q G  + A++I+  +   G KP+  ++ +V++ C+  S  V++GK +   
Sbjct: 592 SWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS-HSGLVQEGKFYFDM 650

Query: 506 SIKA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTK 563
             +A  ++  L   S +V +  + G++  A ++      +     W +++     HG+ +
Sbjct: 651 MKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNE 710

Query: 564 KA 565
            A
Sbjct: 711 LA 712



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 243/487 (49%), Gaps = 43/487 (8%)

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           R+   G+    F  +T+L      G ++ A ++  M I +   V+T   N +++ Y K  
Sbjct: 49  RLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHP-NVITH--NVMLNGYAKLG 105

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVI 287
            + DA  +F  M  RD  +WN++++GY  +  ++ + ETF +M  +G     + T    +
Sbjct: 106 RLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAM 165

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE---- 343
           K C       LA QL + V K     D  +   L+  + +CG ++ AS++F  ++E    
Sbjct: 166 KSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 225

Query: 344 --------------------------MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
                                      +DVVSW  M+S   Q+G +  A++    M  +G
Sbjct: 226 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 285

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           VR +  TY+  LTA   +S      Q+HA +I+        V +AL+  Y K G   EA 
Sbjct: 286 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 345

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            VF  + +++ VAW+ +++G+ Q G    +V+++ Q+ +E +  ++F  +++I+ C +  
Sbjct: 346 GVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCS-R 404

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             +  G+Q H+  +K+    A+ VS++L++MY+K  N++SA  +F+   ++D+VSW SMI
Sbjct: 405 MDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMI 464

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
             Y+Q G+  KA E F  M  +++    IT+  ++ A    G  ++G + + +M++E ++
Sbjct: 465 TAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 520

Query: 614 YPTMEHY 620
            P    Y
Sbjct: 521 RPDWVTY 527



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 244/520 (46%), Gaps = 79/520 (15%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+R+ V +N ++    +    +EAL++ + ++  G+ L  +T +S L  C  L  
Sbjct: 246 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 305

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             +G+Q+H + +++    D  V+++LV+LY ++   ++ + VF+ +++ N V+WT L+SG
Sbjct: 306 LRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 365

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +       +ELF++M+ E +  + F  +T++        +    Q+H++ +K+G    
Sbjct: 366 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 425

Query: 214 TSVCNALISMYLKSKMVRDARAV-------------------------------FDGMED 242
             V N+LISMY K   ++ A A+                               FDGM +
Sbjct: 426 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 485

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS---TFVSVIKLCATTKELRLA 299
           ++ ITWN+M+  Y+ +    +    +  M     E  R    T+V++ K CA     +L 
Sbjct: 486 KNVITWNAMLGAYIQHGAEEDGLRMYKVM--LSEEYVRPDWVTYVTLFKGCADLGANKLG 543

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            Q+  + +K G+  D ++   ++  YSKCG++ +A K+F  +  +KD+VSW AMI+G+ Q
Sbjct: 544 DQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFL-NVKDIVSWNAMITGYSQ 602

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-----------------------QPAVS 396
           +G    A+  F  + + G +P+  +Y  +L+                         P + 
Sbjct: 603 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLE 662

Query: 397 PFQVHAHII--------------KTNYEKSFSVGTALLNAYVKKG---ILDEAAK-VFEL 438
            F     ++                  + +  V  ALL+A    G   + + AAK VFEL
Sbjct: 663 HFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFEL 722

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
            D  D  ++  M   YA  G ++ + +I + +  +G+K N
Sbjct: 723 -DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 761



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 55/382 (14%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F+    RN V +  L+  + +     E++ LF  +R   + L    L++++  C
Sbjct: 342 KEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 401

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   GRQ+H  C+KSG  + V VS SL+ +Y + +N++    +F  MNE ++VSWT
Sbjct: 402 CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWT 461

Query: 149 SLLSGYARNKMNDRVLELFHRM--------------------------------QVEGIK 176
           S+++ Y++     +  E F  M                                  E ++
Sbjct: 462 SMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 521

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+ T+    AD G      Q+    +K G  + TSV NA+I+MY K   + +AR V
Sbjct: 522 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 581

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  +D ++WN+M+ GY  + +  +A E F+++   GA+    ++V+V+  C+     
Sbjct: 582 FDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS----- 636

Query: 297 RLARQLHSQVLKNG-IDFD-----HNIRTGL-----MV-AYSKCGKMEDASKIFSMMREM 344
                 HS +++ G   FD     HNI  GL     MV    + G + +A  +   M   
Sbjct: 637 ------HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMK 690

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
                W A++S    +G  +LA
Sbjct: 691 PTAEVWGALLSACKIHGNNELA 712



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 188/429 (43%), Gaps = 69/429 (16%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM- 340
            F   ++ C     L  AR LH +++  G+     ++  L+ AY  CG + DA ++  M 
Sbjct: 26  AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85

Query: 341 ------------------------------MREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
                                             +DV SW  ++SG+ Q+    +++  F
Sbjct: 86  IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145

Query: 371 CQMTREG-VRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
             M R G   PN FT +  + +  A+       Q+ A + K + +    V  AL++ +V+
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205

Query: 426 KGILDEAAKVF----------------------------ELID---EKDIVAWSAMLAGY 454
            G +D A+++F                            EL D   E+D+V+W+ M++  
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 265

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +Q G    A+ +   + S+GV+ +  T++S + AC A  +++  GKQ HA  I+   +  
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC-ARLSSLRWGKQLHAQVIRNLPHID 324

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V+SALV +Y+K G  + A  VF     R+ V+W  +I G+ Q+G   +++E+F +MR 
Sbjct: 325 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 384

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           + +  D      +I+ C     +  G+Q   + +    I   +   S ++ +Y++   L+
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQ 443

Query: 635 KAMDIINRM 643
            A  I   M
Sbjct: 444 SAEAIFRFM 452


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/554 (42%), Positives = 362/554 (65%), Gaps = 20/554 (3%)

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H+Q+++ G+  D      LM  YSKCG +E A K+F  M  ++ +VSW  M+  H QNG 
Sbjct: 43  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEM-PVRSLVSWNTMVGSHTQNGD 101

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
            + A+  F QM +EG   + FT S ++ A  A        Q+H   +KT  + +  VGTA
Sbjct: 102 CEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTA 161

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           LL+ Y K G++ +A  VFE + E+  V WS+M+AGY Q    E A+ ++ +  + G++ N
Sbjct: 162 LLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHN 221

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           +FT SS ++AC A +A +E GKQ  A S K  + + + V S+L+ MY+K G IE A  VF
Sbjct: 222 QFTISSALSACAARAALIE-GKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 280

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
               ++++V WN+++ G+++H  + +A+  F++M++  +  + IT+I V++AC+H GLV+
Sbjct: 281 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVE 340

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +G++YFD+M+  H++ P + HYSCMVD+  RAG+L +A D I+RMPF A+A++W ++LA+
Sbjct: 341 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLAS 400

Query: 659 CR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           CR              L  ++PH++  +VLLSN+YAA   W+E AR R L+ + K KKE 
Sbjct: 401 CRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKER 460

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           G SWIE+K+K +SF+ G+ +HP+  +IY KLE+L   +K  GYK  T + L D+++  K+
Sbjct: 461 GKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQ 520

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
            +L  HSE+LA+ FG++  P GAP++I+KNLR+CGDCH+ +KL S +  R+I+VRDTNRF
Sbjct: 521 ELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRF 580

Query: 825 HHFKEGLCSCGDYW 838
           HHFK G CSCG++W
Sbjct: 581 HHFKNGYCSCGEFW 594



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 161/295 (54%), Gaps = 1/295 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G   H + ++ G   D   S  L+++Y +   VE  R++FD+M   ++VSW +++  + +
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N   ++ L LF +MQ EG   + FT S+V+   A +  V    Q+H   +K   +    V
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ +Y K  +V+DA  VF+ M +R  +TW+SMVAGYV NEL+ EA   F+     G 
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  + T  S +  CA    L   +Q+ +   K GI  +  + + L+  Y+KCG +E+A  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +FS + E K+VV W A++SG  ++     A+ +F +M + G+ PN  TY  +L+A
Sbjct: 279 VFSSVEE-KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSA 332



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 148/266 (55%), Gaps = 12/266 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           + LFD  P R+ V +N ++  + ++   ++AL LF+ +++ G      T+SSV+  C   
Sbjct: 75  RKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAK 134

Query: 90  -CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            C+F+    +Q+H   +K+    +V V T+L+D+Y +   V+D   VF+ M E + V+W+
Sbjct: 135 CCVFE---CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWS 191

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S+++GY +N++ +  L LFHR Q  G++ N FT S+ L   A    +    QV  +  K 
Sbjct: 192 SMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKT 251

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA---F 265
           G      V ++LI MY K  ++ +A  VF  +E+++ + WN++++G+  +   +EA   F
Sbjct: 252 GIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYF 311

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCA 291
           E    MG+   ++   T++SV+  C+
Sbjct: 312 EKMQQMGICPNDI---TYISVLSACS 334



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 142/267 (53%), Gaps = 3/267 (1%)

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           + A+     HA II+            L+N Y K G+++ A K+F+ +  + +V+W+ M+
Sbjct: 34  RAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMV 93

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
             + Q GD E A+ ++ Q+  EG   +EFT SSV+ AC A     E  KQ H  ++K  L
Sbjct: 94  GSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFE-CKQLHGFALKTAL 152

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           ++ + V +AL+ +Y+K G ++ A+ VF+   +R  V+W+SM+ GY Q+   ++AL +F  
Sbjct: 153 DSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 212

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
            +   LE +  T    ++AC     + EG+Q   +      I   +   S ++D+Y++ G
Sbjct: 213 AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKT-GIGSNIFVISSLIDMYAKCG 271

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAA 658
           ++E+A  + + +    +  +W  +L+ 
Sbjct: 272 IIEEAYTVFSSVE-EKNVVLWNAILSG 297



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 121/229 (52%), Gaps = 7/229 (3%)

Query: 30  KDQSL-FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           KD +L F+  P+R+ V ++ ++  Y ++ L++EAL LF   + +GL     T+SS L  C
Sbjct: 173 KDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSAC 232

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                 + G+QV     K+G   ++ V +SL+D+Y +   +E+   VF  + E NVV W 
Sbjct: 233 AARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWN 292

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK- 207
           ++LSG++R+  +   +  F +MQ  GI PN  T+ +VL   +  G+V    +   ++I+ 
Sbjct: 293 AILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRV 352

Query: 208 --NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
                 V+   C  ++ +  ++ ++ +A+   D M  D  +  W S++A
Sbjct: 353 HNVSPNVLHYSC--MVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 399



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           ++L   G++    +    +   +A + A  +G   HA  I+  L      S+ L+ MYSK
Sbjct: 8   KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 67

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +ESA ++F     R LVSWN+M+  + Q+G  +KAL +F +M+++       T   V
Sbjct: 68  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSV 127

Query: 588 ITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + AC     V E +Q     +    + +++      + ++D+Y++ G+++ A  +   MP
Sbjct: 128 VCACAAKCCVFECKQLHGFALKTALDSNVFVG----TALLDVYAKCGLVKDANLVFECMP 183

Query: 645 FAASATVWRTVLAA 658
             +  T W +++A 
Sbjct: 184 ERSDVT-WSSMVAG 196


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/750 (34%), Positives = 435/750 (58%), Gaps = 30/750 (4%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            LF + P  N V +N ++  + +     EA++ F  + + G+    STL SVL     L  
Sbjct: 305  LFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEA 364

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              +G  VH + +K G   +V V +SL+++Y +   +E  ++VFD ++E N+V W ++L G
Sbjct: 365  LNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGG 424

Query: 154  YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            YA+N    +V++LF  M+  G  P+ FT++++L   A    +    Q+H+ +IK+  E  
Sbjct: 425  YAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYN 484

Query: 214  TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
              V N L+ MY K   + +AR  F+ + +RD+++WN+++ GYV  E   EAF  F  M L
Sbjct: 485  LFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMIL 544

Query: 274  AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
             G      +  S++  CA  + L    Q+H  ++K+G+       + L+  Y KCG +E 
Sbjct: 545  DGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEA 604

Query: 334  ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
            A  +FS M   + VVS  A+I+G+ QN  ++ A++ F +M  EG+ P+  T++ +L A  
Sbjct: 605  ARYVFSCMPS-RSVVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEITFASLLDA-- 660

Query: 394  AVSPF------QVHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDI 444
               P+      Q+H  I K    Y+  F +G +LL  Y+      +A  +F E    K  
Sbjct: 661  CTGPYKLNLGRQIHCLIQKRGLLYDGDF-LGVSLLVMYMNSQRKTDADILFSEFQYPKST 719

Query: 445  VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
            + W+A+++G+ Q G +E A+++Y+++     +P++ TF+SV+ AC+   A++  G+  H+
Sbjct: 720  ILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSIL-ASLGDGRMIHS 778

Query: 505  CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTK 563
                  L++     SA+V MY+K G+++S+ +VF+    K D++SWNSMI G+A++G+ +
Sbjct: 779  LIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAE 838

Query: 564  KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
             AL++F EM+   +  D +TF+GV+TAC+HAG V EG++ FDIMV+ + I P ++H +CM
Sbjct: 839  NALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACM 898

Query: 624  VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
            +DL  R G L++A + I+++ F  +A +W T+L ACR              LI L+P +S
Sbjct: 899  IDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENS 958

Query: 670  AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
            + YVLLSN+YAA+G+W E   VR+ M ++ ++K  G SWI V  KT  F+AGD  HP + 
Sbjct: 959  SPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAG 1018

Query: 730  QIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
            +I++ L++L   +K+ GY  +T  +L+D D
Sbjct: 1019 EIHALLKDLIALMKEDGYIAETDSLLEDED 1048



 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 179/572 (31%), Positives = 306/572 (53%), Gaps = 42/572 (7%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F++  +R+ + +N +L  Y R    ++ +  F  ++  G+     T + VL +C  L D 
Sbjct: 139 FNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDI 198

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+QVHC  +K GF  +     SL+D+Y +  ++ D R++FD + + + VSWT++++GY
Sbjct: 199 DLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGY 258

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +  + +  L++F  MQ  G+ P+   F TV+                            
Sbjct: 259 VQVGLPEEALKVFEDMQKLGLVPDQVAFVTVI---------------------------- 290

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           + C  L         + DA  +F  M + + + WN M++G+V     +EA + F NM   
Sbjct: 291 TACVGL-------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKT 343

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G + TRST  SV+   A+ + L     +H+Q +K G++ +  + + L+  Y+KC KME A
Sbjct: 344 GVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAA 403

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            K+F  + E +++V W AM+ G+ QNG     +  F +M   G  P+ FTY+ IL+A   
Sbjct: 404 KKVFDALDE-RNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACAC 462

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +       Q+H+ IIK N+E +  V   L++ Y K G L+EA + FE I  +D V+W+A+
Sbjct: 463 LECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAI 522

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           + GY Q  D + A  ++R++  +G+ P+E + +S+++ C A   A+EQG+Q H   +K+ 
Sbjct: 523 IVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGC-ANLQALEQGEQVHCFLVKSG 581

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L   L   S+L+ MY K G IE+A  VF     R +VS N++I GYAQ+    +A+++F+
Sbjct: 582 LQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQ 640

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           EM+ + L    ITF  ++ ACT    ++ G+Q
Sbjct: 641 EMQNEGLNPSEITFASLLDACTGPYKLNLGRQ 672



 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 172/551 (31%), Positives = 287/551 (52%), Gaps = 42/551 (7%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H + +K GF     + +++VDLY +  NVE   + F+ + + ++++W S+LS Y+R 
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              ++V+  F  +Q  G+ PN FT++ VL   A    +    QVH  VIK G E  +   
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            +LI MY K   + DAR +FD + D D+++W +M+AGYV   L  EA + F +M   G  
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             +  FV+VI  C                             GL       G+++DA  +
Sbjct: 281 PDQVAFVTVITAC----------------------------VGL-------GRLDDACDL 305

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M    +VV+W  MISGH++ G    A++FF  M + GV+    T   +L+A  ++  
Sbjct: 306 FVQMPN-TNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEA 364

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                 VHA  IK     +  VG++L+N Y K   ++ A KVF+ +DE+++V W+AML G
Sbjct: 365 LNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGG 424

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           YAQ G     +K++ ++   G  P+EFT++S+++AC A    +E G+Q H+  IK     
Sbjct: 425 YAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSAC-ACLECLEMGRQLHSFIIKHNFEY 483

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            L V + LV MY+K G +E A + F+  R RD VSWN++I GY Q     +A  +F+ M 
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMI 543

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +  D ++   +++ C +   +++G+Q    +V +  +   +   S ++D+Y + G +
Sbjct: 544 LDGIAPDEVSLASILSGCANLQALEQGEQVHCFLV-KSGLQTCLYAGSSLIDMYVKCGAI 602

Query: 634 EKAMDIINRMP 644
           E A  + + MP
Sbjct: 603 EAARYVFSCMP 613



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 291/560 (51%), Gaps = 21/560 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +RN V +N +L  Y ++    + + LF  +R  G      T +S+L  C CL
Sbjct: 404 KKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACL 463

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQ+H   +K  F  ++ V  +LVD+Y +   +E+ R+ F+ +   + VSW +++
Sbjct: 464 ECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAII 523

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY + +  D    +F RM ++GI P+  + +++L   A+   +    QVH  ++K+G +
Sbjct: 524 VGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQ 583

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                 ++LI MY+K   +  AR VF  M  R  ++ N+++AGY  N+L +EA + F  M
Sbjct: 584 TCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEM 642

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYSKCGK 330
              G   +  TF S++  C    +L L RQ+H  + K G+ +D + +   L+V Y    +
Sbjct: 643 QNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQR 702

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
             DA  +FS  +  K  + WTA+ISGH QNG  + A+  + +M R   RP+  T++ +L 
Sbjct: 703 KTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLR 762

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIV 445
           A   ++       +H+ I     +     G+A+++ Y K G +  + +VFE +  K D++
Sbjct: 763 ACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVI 822

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF--- 502
           +W++M+ G+A+ G  E A+KI+ ++    ++P++ TF  V+ AC+  +  V +G++    
Sbjct: 823 SWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACS-HAGRVSEGREIFDI 881

Query: 503 --HACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQH 559
             H+  I  +L++  C    ++ +  + G ++ A E + K   + + + W +++     H
Sbjct: 882 MVHSYKIVPRLDHCAC----MIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIH 937

Query: 560 G---HTKKALEVFKEMRRQD 576
           G     ++A E   E+  ++
Sbjct: 938 GDDIRGRRAAEKLIELEPEN 957



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 223/440 (50%), Gaps = 34/440 (7%)

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
           T+  +H   +K G      + +A++ +Y K   V  A   F+ +E RD + WNS+++ Y 
Sbjct: 99  TSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYS 158

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
                 +    F ++   G    + T+  V+  CA   ++ L +Q+H  V+K G +F+  
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
               L+  YSKCG + DA KIF  + +  D VSWTAMI+G++Q G  + A+  F  M + 
Sbjct: 219 CEGSLIDMYSKCGSLVDARKIFDAVVD-PDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           G+ P+   +  ++T                               A V  G LD+A  +F
Sbjct: 278 GLVPDQVAFVTVIT-------------------------------ACVGLGRLDDACDLF 306

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             +   ++VAW+ M++G+ + G    A+  ++ +   GVK    T  SV++A  A   A+
Sbjct: 307 VQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA-IASLEAL 365

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
             G   HA +IK  LN+ + V S+L+ MY+K   +E+A +VF    +R+LV WN+M+ GY
Sbjct: 366 NYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGY 425

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           AQ+G+  K +++F EMR      D  T+  +++AC     ++ G+Q    ++ +H+    
Sbjct: 426 AQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII-KHNFEYN 484

Query: 617 MEHYSCMVDLYSRAGMLEKA 636
           +   + +VD+Y++ G LE+A
Sbjct: 485 LFVENTLVDMYAKCGALEEA 504



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 194/373 (52%), Gaps = 30/373 (8%)

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           AQ + +   +HA  +K  +     +G+A+++ Y K G ++ AAK F  ++++DI+AW+++
Sbjct: 94  AQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSV 153

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           L+ Y++ G  E  +  +  L + GV PN+FT++ V+++C A    ++ GKQ H   IK  
Sbjct: 154 LSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSC-ARLVDIDLGKQVHCGVIKMG 212

Query: 511 LN-NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              N+ C  S L+ MYSK G++  A ++F      D VSW +MI GY Q G  ++AL+VF
Sbjct: 213 FEFNSFCEGS-LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVF 271

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           ++M++  L  D + F+ VITAC   G +D+    F  M N + +      ++ M+  + +
Sbjct: 272 EDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVV-----AWNVMISGHVK 326

Query: 630 AGMLEKAMDIINRM---PFAASATVWRTVLAACRLISLQPHDSAIYV--------LLSNM 678
            G   +A+D    M      ++ +   +VL+A  + SL+  +  + V        L SN+
Sbjct: 327 RGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA--IASLEALNYGLLVHAQAIKQGLNSNV 384

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT-YSFLAGDISHPQSNQIYSKLEE 737
           Y  +      A+  K+   +KV     +  ++ +N   ++ + G  +    N   SK+ +
Sbjct: 385 YVGSSLINMYAKCEKMEAAKKV-----FDALDERNLVLWNAMLGGYAQ---NGYASKVMK 436

Query: 738 LSTRLKDAGYKPD 750
           L + ++  G+ PD
Sbjct: 437 LFSEMRGCGFWPD 449



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 193/400 (48%), Gaps = 57/400 (14%)

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           R ++ +H+Q LK G      + + ++  Y+KCG +E A+K F+ + E +D+++W +++S 
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQL-EKRDILAWNSVLSM 156

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE-K 411
           + + G+++  +  F  +   GV PN FTY+I+L++   +       QVH  +IK  +E  
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           SF  G+ L++ Y K G L +A K+F+ + + D V+W+AM+AGY Q+G  E A+K++  + 
Sbjct: 217 SFCEGS-LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
             G+ P++  F +VI AC                                       G +
Sbjct: 276 KLGLVPDQVAFVTVITACVGL------------------------------------GRL 299

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           + A ++F +    ++V+WN MI G+ + G   +A++ FK M +  ++    T   V++A 
Sbjct: 300 DDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAI 359

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHY----SCMVDLYSRAGMLEKAMDIINRMPFAA 647
                ++ G     ++V+   I   +       S ++++Y++   +E A  + + +    
Sbjct: 360 ASLEALNYG-----LLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD-ER 413

Query: 648 SATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQE 687
           +  +W  +L      +   + S +  L S M    G W +
Sbjct: 414 NLVLWNAMLGG---YAQNGYASKVMKLFSEMRGC-GFWPD 449


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/694 (37%), Positives = 384/694 (55%), Gaps = 51/694 (7%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALI--SMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           + T  Q+H  +IK G        + LI  S   +S  +  A ++F+ +E+ +   WNSM+
Sbjct: 42  IRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMI 101

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            G   +     A   F  M  +G E    TF  ++K CA        +Q+H+ VLK G  
Sbjct: 102 RGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFV 161

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFS----------------------------MMREM 344
            D  I T L+  Y++ G+M +A  +F                             +  EM
Sbjct: 162 SDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEM 221

Query: 345 --KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV-- 400
             KDVVSW AMI+G+ Q G    A+  F  M +  V PN  T   +L+A    +   +  
Sbjct: 222 PVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGN 281

Query: 401 --HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
              + I       +  +  AL++ Y K G L  A ++F+ + E+D+++W+ M+ GY  + 
Sbjct: 282 SMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMC 341

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             + A+ ++R++ + GV+P E TF S++ +C A   A++ GK  HA   K   + +  +S
Sbjct: 342 SYKEALALFREMLASGVEPTEITFLSILPSC-AHLGAIDLGKWIHAYINKNFNSVSTSLS 400

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           ++L+ +Y+K GNI +A +VF   + + L SWN+MICG A HG   KA E+F +M    +E
Sbjct: 401 TSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIE 460

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            + ITF+G+++AC HAGLVD GQQ+F  MV ++ I P  +HY CM+DL  RAG+ E+A  
Sbjct: 461 PNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAES 520

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           ++  M       +W ++L ACR              L  L+P +   YVLLSN+YA  G 
Sbjct: 521 LLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGK 580

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W + AR+R  +NDR +KK  G + IEV N  + FL GD  HPQS  IY  LEE+  +LK 
Sbjct: 581 WDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKV 640

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            G+  DTS VL D+D+E KE  LS HSE+LAIAFGL++T  G P++I+KNLRVC +CH+ 
Sbjct: 641 FGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSA 700

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KLISK+  R+I+ RD NRFHHFK+G CSC DYW
Sbjct: 701 TKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 239/505 (47%), Gaps = 41/505 (8%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYM--RTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +Q+H   +K+G    +   + L++     R+ ++     +F+ + E N+  W S++ G +
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            +      L  F RM   G++PNS+TF  +L   A         Q+H  V+K G      
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVF 165

Query: 216 VCNALISMYLKS------KMVRD-------------------------ARAVFDGMEDRD 244
           +  +LI+MY +S      ++V D                         AR +FD M  +D
Sbjct: 166 IHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKD 225

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++WN+M+AGY       EA   F +M  A      ST VSV+  CA +  L L   + S
Sbjct: 226 VVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRS 285

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            +   G+  +  +   L+  YSKCG ++ A ++F  M E +DV+SW  MI G+    +  
Sbjct: 286 WIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLE-RDVISWNVMIGGYTHMCSYK 344

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALL 420
            A+  F +M   GV P   T+  IL +   +        +HA+I K     S S+ T+L+
Sbjct: 345 EALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLI 404

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + Y K G +  A +VF+ +  K + +W+AM+ G A  G  + A +++ +++S+G++PNE 
Sbjct: 405 DLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEI 464

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKA-KLNNALCVSSALVTMYSKKGNIESASEVFK 539
           TF  +++AC   +  V+ G+QF +  ++  K++        ++ +  + G  E A  + +
Sbjct: 465 TFVGILSACKH-AGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQ 523

Query: 540 R-QRKRDLVSWNSMICGYAQHGHTK 563
             + K D   W S++     HG  +
Sbjct: 524 NMEVKPDGAIWGSLLGACRDHGRVE 548



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 212/410 (51%), Gaps = 47/410 (11%)

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL-----MVAYSKCGKMEDASKIFSMM 341
           +KL +  + +R  +Q+H+ ++K G+   HN    L       A S+ G +  A  +F+ +
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGL---HNTLFALSKLIEFSAVSRSGDISYAISLFNSI 89

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
            E  ++  W +MI G   + +  LA+ FF +M   GV PN +T+  +L +   ++     
Sbjct: 90  EE-PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEG 148

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF--------------------- 436
            Q+HAH++K  +     + T+L+N Y + G ++ A  VF                     
Sbjct: 149 KQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALW 208

Query: 437 -------ELIDE---KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
                  +L DE   KD+V+W+AM+AGYAQ+G ++ A+ ++  +    V PNE T  SV+
Sbjct: 209 GYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVL 268

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           +AC A S A++ G    +      L + L + +AL+ MYSK G++++A E+F    +RD+
Sbjct: 269 SAC-AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDV 327

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           +SWN MI GY      K+AL +F+EM    +E   ITF+ ++ +C H G +D G ++   
Sbjct: 328 ISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG-KWIHA 386

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
            +N++    +    + ++DLY++ G +  A  + + M   + A+ W  ++
Sbjct: 387 YINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLAS-WNAMI 435



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 232/520 (44%), Gaps = 49/520 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           SLF+   + N   +N ++           AL  F+ +   G+     T   +LK+C  L 
Sbjct: 84  SLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLA 143

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT---NN--------------------- 128
               G+Q+H   +K GF  DV + TSL+++Y ++   NN                     
Sbjct: 144 SAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIA 203

Query: 129 -------VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                  ++  R++FD+M   +VVSW ++++GYA+   +   L LF  M+   + PN  T
Sbjct: 204 GYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNEST 263

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             +VL   A    +     + + +   G      + NALI MY K   ++ AR +FD M 
Sbjct: 264 IVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDML 323

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           +RD I+WN M+ GY     + EA   F  M  +G E T  TF+S++  CA    + L + 
Sbjct: 324 ERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKW 383

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H+ + KN      ++ T L+  Y+KCG +  A ++F  M+ +K + SW AMI G   +G
Sbjct: 384 IHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK-IKSLASWNAMICGLAMHG 442

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYE---KSFSV 415
             D A   F +M+ +G+ PN  T+  IL+A        +      +   +Y+   KS   
Sbjct: 443 QADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHY 502

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSE 473
           G  +++   + G+ +EA  + + ++ K D   W ++L      G  E G +   R    E
Sbjct: 503 G-CMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELE 561

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
              P  +   S I A          GK      I+ +LN+
Sbjct: 562 PDNPGAYVLLSNIYAGA--------GKWDDVARIRTRLND 593



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 160/341 (46%), Gaps = 1/341 (0%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y  + + LFD  P ++ V +N ++  Y +    +EAL LF  +R+  +P   ST+ SVL 
Sbjct: 210 YMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLS 269

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        G  +       G   ++ +  +L+D+Y +  +++  R +FDDM E +V+S
Sbjct: 270 ACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVIS 329

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  ++ GY         L LF  M   G++P   TF ++L   A  G +     +H  + 
Sbjct: 330 WNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYIN 389

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           KN   V TS+  +LI +Y K   +  AR VFDGM+ +   +WN+M+ G   +    +AFE
Sbjct: 390 KNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFE 449

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AY 325
            F+ M   G E    TFV ++  C     + L +Q  S ++++      +   G M+   
Sbjct: 450 LFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLL 509

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            + G  E+A  +   M    D   W +++     +G ++L 
Sbjct: 510 GRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELG 550


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/802 (33%), Positives = 423/802 (52%), Gaps = 95/802 (11%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK-P 177
           +++ Y +   + D   +F  M   +V SW +L+SGY +++     LE F  M   G   P
Sbjct: 77  MLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWP 136

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM-------------- 223
           N+FT +  +      G  + A+Q+  MV K   +  + V  AL+ M              
Sbjct: 137 NAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF 196

Query: 224 -----------------YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
                            Y+K+  V  A  +FD M +RD ++WN MV+    +    EA +
Sbjct: 197 VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
              +M   G  L  +T+ S +  CA    LR  +QLH+QV++N    D  + + L+  Y+
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYA 316

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G  ++A  +F+ + + ++ V+WT +ISG LQ G    +V  F QM  E +  + F  +
Sbjct: 317 KSGCFKEAKGVFNSLHD-RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 375

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +++   +        Q+H+  +K+   ++  V  +L++ Y K   L  A  +F  ++EK
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK 435

Query: 443 DIVAWSAMLAGYAQIGDT-------------------------------EGAVKIYR-QL 470
           DIV+W++M+  Y+Q+G+                                E  +++Y+  L
Sbjct: 436 DIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVML 495

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
           + E V+P+  T+ ++   C A   A + G Q    ++K  L     V++A++TMYSK G 
Sbjct: 496 SEEYVRPDWVTYVTLFKGC-ADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGR 554

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           I  A +VF     +D+VSWN+MI GY+QHG  K+A+E+F ++ ++  + D I+++ V++ 
Sbjct: 555 ILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSG 614

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C+H+GLV EG+ YFD+M   H+I P +EH+SCMVDL  RAG L +A D+I+ MP   +A 
Sbjct: 615 CSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAE 674

Query: 651 VWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           VW  +L+AC++                L   DS  Y+L++ +YA  G   + A++RKLM 
Sbjct: 675 VWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMR 734

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           D+ +KK  GYSW+EV NK + F A D+SHPQ   I  KL+EL  ++   GY         
Sbjct: 735 DKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR------- 787

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
              D  +  I   HSE+LA+AFGL+  P   P+ I+KNLR+CGDCHTVIKLIS +  R+ 
Sbjct: 788 --TDSTRSEI--HHSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREF 843

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           V+RD  RFHHF  G CSCGDYW
Sbjct: 844 VIRDAVRFHHFNGGSCSCGDYW 865



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 277/602 (46%), Gaps = 72/602 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGCLF 92
           LF R P R+   +N L+  Y +   +  +L  FL + R G     + TL+  +K+CG L 
Sbjct: 93  LFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALG 152

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDL------------------------------ 122
            H    Q+     K     D  V+ +LVD+                              
Sbjct: 153 WHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLA 212

Query: 123 -YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
            Y++T  V+    +FD M E +VVSW  ++S  +++      L++   MQ +G++ +S T
Sbjct: 213 GYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTT 272

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +++ L   A    +    Q+H  VI+N   +   V +AL+ +Y KS   ++A+ VF+ + 
Sbjct: 273 YTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLH 332

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           DR+++ W  +++G++      E+ E FN M      L +    ++I  C +  +L L RQ
Sbjct: 333 DRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQ 392

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LHS  LK+G      +   L+  Y+KC  ++ A  IF  M E KD+VSWT+MI+ + Q G
Sbjct: 393 LHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNE-KDIVSWTSMITAYSQVG 451

Query: 362 AIDLAVNFF--------------------------------CQMTREGVRPNGFTYSIIL 389
            +  A  FF                                  ++ E VRP+  TY  + 
Sbjct: 452 NVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLF 511

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNA----YVKKGILDEAAKVFELIDEKDIV 445
                +   ++   II    +    + T++ NA    Y K G + EA KVF+ ++ KDIV
Sbjct: 512 KGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIV 571

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AM+ GY+Q G  + A++I+  +   G KP+  ++ +V++ C+  S  V++GK +   
Sbjct: 572 SWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS-HSGLVQEGKFYFDM 630

Query: 506 SIKA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTK 563
             +A  ++  L   S +V +  + G++  A ++      +     W +++     HG+ +
Sbjct: 631 MKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNE 690

Query: 564 KA 565
            A
Sbjct: 691 LA 692



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 243/487 (49%), Gaps = 43/487 (8%)

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           R+   G+    F  +T+L      G ++ A ++  M I +   V+T   N +++ Y K  
Sbjct: 29  RLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHP-NVITH--NVMLNGYAKLG 85

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVI 287
            + DA  +F  M  RD  +WN++++GY  +  ++ + ETF +M  +G     + T    +
Sbjct: 86  RLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAM 145

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE---- 343
           K C       LA QL + V K     D  +   L+  + +CG ++ AS++F  ++E    
Sbjct: 146 KSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMF 205

Query: 344 --------------------------MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
                                      +DVVSW  M+S   Q+G +  A++    M  +G
Sbjct: 206 CRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKG 265

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           VR +  TY+  LTA   +S      Q+HA +I+        V +AL+  Y K G   EA 
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 325

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            VF  + +++ VAW+ +++G+ Q G    +V+++ Q+ +E +  ++F  +++I+ C +  
Sbjct: 326 GVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCS-R 384

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             +  G+Q H+  +K+    A+ VS++L++MY+K  N++SA  +F+   ++D+VSW SMI
Sbjct: 385 MDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMI 444

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
             Y+Q G+  KA E F  M  +++    IT+  ++ A    G  ++G + + +M++E ++
Sbjct: 445 TAYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 500

Query: 614 YPTMEHY 620
            P    Y
Sbjct: 501 RPDWVTY 507



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/520 (24%), Positives = 244/520 (46%), Gaps = 79/520 (15%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+R+ V +N ++    +    +EAL++ + ++  G+ L  +T +S L  C  L  
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             +G+Q+H + +++    D  V+++LV+LY ++   ++ + VF+ +++ N V+WT L+SG
Sbjct: 286 LRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 345

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +       +ELF++M+ E +  + F  +T++        +    Q+H++ +K+G    
Sbjct: 346 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 405

Query: 214 TSVCNALISMYLKSKMVRDARAV-------------------------------FDGMED 242
             V N+LISMY K   ++ A A+                               FDGM +
Sbjct: 406 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 465

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS---TFVSVIKLCATTKELRLA 299
           ++ ITWN+M+  Y+ +    +    +  M     E  R    T+V++ K CA     +L 
Sbjct: 466 KNVITWNAMLGAYIQHGAEEDGLRMYKVM--LSEEYVRPDWVTYVTLFKGCADLGANKLG 523

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            Q+  + +K G+  D ++   ++  YSKCG++ +A K+F  +  +KD+VSW AMI+G+ Q
Sbjct: 524 DQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFL-NVKDIVSWNAMITGYSQ 582

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-----------------------QPAVS 396
           +G    A+  F  + + G +P+  +Y  +L+                         P + 
Sbjct: 583 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLE 642

Query: 397 PFQVHAHII--------------KTNYEKSFSVGTALLNAYVKKG---ILDEAAK-VFEL 438
            F     ++                  + +  V  ALL+A    G   + + AAK VFEL
Sbjct: 643 HFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFEL 702

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
            D  D  ++  M   YA  G ++ + +I + +  +G+K N
Sbjct: 703 -DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKN 741



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 55/382 (14%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F+    RN V +  L+  + +     E++ LF  +R   + L    L++++  C
Sbjct: 322 KEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 381

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   GRQ+H  C+KSG  + V VS SL+ +Y + +N++    +F  MNE ++VSWT
Sbjct: 382 CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWT 441

Query: 149 SLLSGYARNKMNDRVLELFHRM--------------------------------QVEGIK 176
           S+++ Y++     +  E F  M                                  E ++
Sbjct: 442 SMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 501

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+ T+    AD G      Q+    +K G  + TSV NA+I+MY K   + +AR V
Sbjct: 502 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 561

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  +D ++WN+M+ GY  + +  +A E F+++   GA+    ++V+V+  C+     
Sbjct: 562 FDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS----- 616

Query: 297 RLARQLHSQVLKNG-IDFD-----HNIRTGL-----MV-AYSKCGKMEDASKIFSMMREM 344
                 HS +++ G   FD     HNI  GL     MV    + G + +A  +   M   
Sbjct: 617 ------HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMK 670

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
                W A++S    +G  +LA
Sbjct: 671 PTAEVWGALLSACKIHGNNELA 692



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 188/428 (43%), Gaps = 69/428 (16%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM-- 340
           F   ++ C     L  AR LH +++  G+     ++  L+ AY  CG + DA ++  M  
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66

Query: 341 -----------------------------MREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
                                            +DV SW  ++SG+ Q+    +++  F 
Sbjct: 67  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126

Query: 372 QMTREG-VRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            M R G   PN FT +  + +  A+       Q+ A + K + +    V  AL++ +V+ 
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186

Query: 427 GILDEAAKVF----------------------------ELID---EKDIVAWSAMLAGYA 455
           G +D A+++F                            EL D   E+D+V+W+ M++  +
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G    A+ +   + S+GV+ +  T++S + AC A  +++  GKQ HA  I+   +   
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTAC-ARLSSLRWGKQLHAQVIRNLPHIDP 305

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V+SALV +Y+K G  + A  VF     R+ V+W  +I G+ Q+G   +++E+F +MR +
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 365

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            +  D      +I+ C     +  G+Q   + +    I   +   S ++ +Y++   L+ 
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQS 424

Query: 636 AMDIINRM 643
           A  I   M
Sbjct: 425 AEAIFRFM 432


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/700 (36%), Positives = 392/700 (56%), Gaps = 34/700 (4%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M  EG    S  +  +L V  + G +  A  +H  ++K G      V  +L++ Y++   
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGA 128

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            +DAR++FD M +++ +TW +++ GY  N   +EA E F  M  AG   +  T  +++  
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNA 188

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C+ +    L  Q+H   +K       +I   L   Y+K G +E A + F M+ + K+V++
Sbjct: 189 CSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPD-KNVIT 247

Query: 350 WTAMISGHLQN-GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           WT MIS   ++    +L +  F  M  +GV PN FT + +++            QV A  
Sbjct: 248 WTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFC 307

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG-- 462
            K   + +  V  + +  Y++KG  DEA + FE +D+  I+ W+AM++GYAQI +T    
Sbjct: 308 FKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDD 367

Query: 463 ---------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
                    A+K++R L    +KP+ FTFSS+++ C++   A+EQG+Q HA +IK    +
Sbjct: 368 LHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSS-MMALEQGEQIHAQTIKTGFLS 426

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V+SALV MY+K G IE A++ F     R LV+W SMI GY+QHG  ++A+++F++MR
Sbjct: 427 DVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMR 486

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +  + ITF+ V++AC++AGL ++ + YFD+M  E+ I P ++HY CMVD++ R G L
Sbjct: 487 FAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRL 546

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
           + A   I R  F  +  +W +++A C              RLI L+P     YVLL NMY
Sbjct: 547 DDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMY 606

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
            +   W + ARVRKLM    +      SWI +K+K Y F A D +H  S+++Y  LE L 
Sbjct: 607 ISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLL 666

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILS--QHSERLAIAFGLVATPAGAPLQIVKNLRV 797
            + K  GY+P  S  L D +D+ K    S   HSERLA+A GL+ TP GA +++ KN+ +
Sbjct: 667 EKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKNITM 726

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           C DCH+ IK  S L  R+IVVRD+ R H FK+G CSCGD+
Sbjct: 727 CRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 147/502 (29%), Positives = 254/502 (50%), Gaps = 21/502 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R +H   VK+G + D+ V+TSLV+ YMR    +D R +FD M E NVV+WT+L++GY  
Sbjct: 97  ARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTV 156

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N      LE+F  M   G  P+ +T   +L   +         QVH   IK     +TS+
Sbjct: 157 NSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSI 216

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME-AFETFNNMGLAG 275
            N+L  MY KS  +  A   F  + D++ ITW +M++    +E + E     F +M + G
Sbjct: 217 GNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDG 276

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 T  SV+ LC T  +L L +Q+ +   K G   +  ++   M  Y + G+ ++A 
Sbjct: 277 VLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAM 336

Query: 336 KIFSMMREMKDVVSWTAMISGH---LQNGAIDL--------AVNFFCQMTREGVRPNGFT 384
           + F  M ++  +++W AMISG+   ++    DL        A+  F  + R  ++P+ FT
Sbjct: 337 RFFEEMDDVS-IITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFT 395

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +S IL+   ++       Q+HA  IKT +     V +AL+N Y K G +++A K F  + 
Sbjct: 396 FSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMS 455

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            + +V W++M++GY+Q G  + A++++  +   GV+PNE TF  V++AC+    A +   
Sbjct: 456 IRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEH 515

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
            F     + K+   +     +V M+ + G ++ A    +R   + +   W+S++ G   H
Sbjct: 516 YFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSH 575

Query: 560 GHTKKAL---EVFKEMRRQDLE 578
           G+ + A    +   E+R + +E
Sbjct: 576 GNMELAFYAADRLIELRPKGIE 597



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 230/457 (50%), Gaps = 25/457 (5%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S+  +SLFD+ P++N V +  L+  Y  +S   EAL +F+ +   G      TL ++L  
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNA 188

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C    +   G QVH   +K       ++  SL  +Y ++ ++E   R F  + + NV++W
Sbjct: 189 CSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITW 248

Query: 148 TSLLSGYARNK-MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           T+++S  A ++   +  L LF  M ++G+ PN FT ++V+ +      +    QV     
Sbjct: 249 TTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCF 308

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY------VTNEL 260
           K G +    V N+ + +YL+     +A   F+ M+D   ITWN+M++GY        ++L
Sbjct: 309 KIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDL 368

Query: 261 H-----MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           H      +A + F N+  +  +    TF S++ +C++   L    Q+H+Q +K G   D 
Sbjct: 369 HARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDV 428

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y+KCG +EDA+K F  M  ++ +V+WT+MISG+ Q+G    A+  F  M  
Sbjct: 429 VVNSALVNMYNKCGCIEDATKAFVEM-SIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRF 487

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQVHAH---IIKTNYEKSFSVG--TALLNAYVKKGILD 430
            GVRPN  T+  +L+A       +   H   ++K  Y+    V     +++ +V+ G LD
Sbjct: 488 AGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLD 547

Query: 431 EAAKVFELID----EKDIVAWSAMLAGYAQIGDTEGA 463
           +A   F  I     E +   WS+++AG    G+ E A
Sbjct: 548 DA---FAFIRRTGFEPNEAIWSSLVAGCRSHGNMELA 581



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 20/263 (7%)

Query: 11  INPQTKQPPKSLRSPFYSKKDQS-----LFDRSPQRNFVEYNRLL------FEYCRDSLH 59
           I  QT  P K+     Y +K ++      F+     + + +N ++       E  +D LH
Sbjct: 310 IGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLH 369

Query: 60  Q-----EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
                 +AL +F  ++R  +     T SS+L  C  +     G Q+H + +K+GF  DV 
Sbjct: 370 ARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVV 429

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
           V+++LV++Y +   +ED  + F +M+   +V+WTS++SGY+++      ++LF  M+  G
Sbjct: 430 VNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAG 489

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDA 233
           ++PN  TF  VL   +  G+   A     M+ +    E +      ++ M+++   + DA
Sbjct: 490 VRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDA 549

Query: 234 RAVF--DGMEDRDSITWNSMVAG 254
            A     G E  ++I W+S+VAG
Sbjct: 550 FAFIRRTGFEPNEAI-WSSLVAG 571


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/750 (32%), Positives = 427/750 (56%), Gaps = 21/750 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFG-STLSSVLKTCGCLF 92
            F  +P+R+ V +N +L  + ++   ++++++FL + R     F  +T + VLK C  L 
Sbjct: 131 FFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLE 190

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   G QVH   V+ GF +DV   ++L+D+Y +   ++D  ++F ++   N V W+++++
Sbjct: 191 DGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIA 250

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N  +   LELF  MQ  GI  +   +++V    A    +    Q+H   +K     
Sbjct: 251 GCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGS 310

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             +V  A + MY K   + DA+ +F+ +       +N+++ G V NE   EA + F  + 
Sbjct: 311 DITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLL 370

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +G      +       CA+ K     RQLHS  +K+ +  +  +   ++  Y KC  + 
Sbjct: 371 KSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALS 430

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
           +A  +F  M E +D VSW A+I+ H QNG  +  +N F  M R  + P+ FTY  +L A 
Sbjct: 431 EACCMFDEM-ERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKAC 489

Query: 392 ---QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
              Q   S  ++H  IIK+       VG AL++ Y K G+++EA K+ + I+++ +V+W+
Sbjct: 490 SSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWN 549

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A++AG+  +  +E A   + ++    VKP+ FT++ V++AC A  A+V  GKQ H   IK
Sbjct: 550 AIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDAC-ANLASVGLGKQIHGQIIK 608

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            +L++ + ++S LV MYSK GN++ ++ VF++   +D V+WN+MICGYAQHG  ++AL  
Sbjct: 609 LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGY 668

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M+ +++  +  TF+ ++ AC H G +D+G  YF+ M+ E+ + P +EHYSCM+D+  
Sbjct: 669 FERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIG 728

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           R+G + +A+ +I  MPF A A +WRT+L+ C+              ++ L+P DS+  +L
Sbjct: 729 RSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACIL 788

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA  G W + + +RK+M   K+KKE G SWIEVK++ ++FL G+ +HP+  +IY  
Sbjct: 789 LSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKI 848

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           L  L   +K  GY PD  +++ +  +E+++
Sbjct: 849 LSVLLDEMKWIGYIPDIDFLIDEESEEYEQ 878



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 178/645 (27%), Positives = 324/645 (50%), Gaps = 65/645 (10%)

Query: 46  YNRLL--FEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
           YN+ L  F +C  S  Q+         +  LP    T S +++ C        G+Q H  
Sbjct: 17  YNKTLRIFTFCTISTLQQ--------NQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHAR 68

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV------------------- 144
            + SGF  DV +S  L+ +Y+R +++    +VF+ M++ +V                   
Sbjct: 69  MIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLA 128

Query: 145 ------------VSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVL---GV 188
                       VSW S+LSG+ +N    + +++F  M + E +  +  TF+ VL    V
Sbjct: 129 NEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSV 188

Query: 189 LADEGIVATAVQVHTMVIKNG--GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI 246
           L D G+    +QVH ++++ G   +VVT   +AL+ MY K K + D+  +F  +  ++ +
Sbjct: 189 LEDGGL---GIQVHGLIVRMGFYKDVVTG--SALLDMYAKCKRLDDSLKIFSEIPVKNWV 243

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
            W++++AG V N+ H+   E F  M   G  +++S + SV + CA    L++  QLH+  
Sbjct: 244 CWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHA 303

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           LK     D  + T  +  Y+KCG + DA +IF+ + +   +  + A+I G ++N     A
Sbjct: 304 LKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPK-HSLQCYNAIIVGCVRNEKGFEA 362

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNA 422
           + FF  + + G+  N  + S   +A  ++       Q+H+  +K+    +  V  ++L+ 
Sbjct: 363 LQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDM 422

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K   L EA  +F+ ++ +D V+W+A++A + Q G+ E  + ++  +    ++P++FT+
Sbjct: 423 YGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTY 482

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            SV+ AC++   A+  G + H   IK+ L     V  AL+ MY K G IE A ++  R  
Sbjct: 483 GSVLKACSSQQ-ALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIE 541

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           ++ +VSWN++I G+    H++ A   F EM +  ++ D  T+  V+ AC +   V  G+Q
Sbjct: 542 QQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQ 601

Query: 603 -YFDIMVNEHH--IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
            +  I+  E H  +Y T    S +VD+YS+ G ++ +  +  + P
Sbjct: 602 IHGQIIKLELHSDVYIT----STLVDMYSKCGNMQDSALVFEKAP 642



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 272/558 (48%), Gaps = 47/558 (8%)

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF-------TFSTVLGVLADEGIVATAVQ 200
           TS L   A   + ++ L +F    +  ++ N         TFS ++   +D   +    Q
Sbjct: 5   TSSLRLIASRILYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQ 64

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT------------- 247
            H  +I +G      + N L+ MYL+   +  A  VF+ M  RD I+             
Sbjct: 65  AHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGE 124

Query: 248 ------------------WNSMVAGYVTNELHMEAFETFNNMGLA-GAELTRSTFVSVIK 288
                             WNSM++G++ N    ++ + F +MG +      ++TF  V+K
Sbjct: 125 MNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLK 184

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C+  ++  L  Q+H  +++ G   D    + L+  Y+KC +++D+ KIFS +  +K+ V
Sbjct: 185 ACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEI-PVKNWV 243

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
            W+A+I+G +QN    L +  F +M + G+  +   Y+ +  +   +S      Q+HAH 
Sbjct: 244 CWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHA 303

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K ++    +VGTA L+ Y K G L +A ++F  + +  +  ++A++ G  +      A+
Sbjct: 304 LKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEAL 363

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           + ++ L   G+  NE + S   +AC +    ++ G+Q H+ S+K+ L + +CV+++++ M
Sbjct: 364 QFFQLLLKSGLGFNEISLSGAFSACASIKGDLD-GRQLHSLSVKSTLRSNICVANSILDM 422

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K   +  A  +F    +RD VSWN++I  + Q+G+ ++ L +F  M R  +E D  T+
Sbjct: 423 YGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTY 482

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             V+ AC+    ++ G +  + ++       +      ++D+Y + GM+E+A  I +R+ 
Sbjct: 483 GSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG-GALIDMYCKCGMIEEAKKIHDRIE 541

Query: 645 FAASATVWRTVLAACRLI 662
              +   W  ++A   L+
Sbjct: 542 -QQTMVSWNAIIAGFTLL 558



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 222/440 (50%), Gaps = 7/440 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +F+  P+ +   YN ++    R+    EAL  F  + + GL     +LS     C  +
Sbjct: 332 QRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASI 391

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              + GRQ+H   VKS    ++ V+ S++D+Y +   + +   +FD+M   + VSW +++
Sbjct: 392 KGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVI 451

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + + +N   +  L LF  M    ++P+ FT+ +VL   + +  + + +++H  +IK+G  
Sbjct: 452 AAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLG 511

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           + + V  ALI MY K  M+ +A+ + D +E +  ++WN+++AG+   +   +A   F  M
Sbjct: 512 LDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEM 571

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                +    T+  V+  CA    + L +Q+H Q++K  +  D  I + L+  YSKCG M
Sbjct: 572 LKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNM 631

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +D++ +F      KD V+W AMI G+ Q+G  + A+ +F +M  E VRPN  T+  IL A
Sbjct: 632 QDSALVFEKAPN-KDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRA 690

Query: 392 QPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
              +          +A + +   E      + +++   + G + EA K+  E+  E D V
Sbjct: 691 CAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAV 750

Query: 446 AWSAMLAGYAQIGDTEGAVK 465
            W  +L+     G+ E A K
Sbjct: 751 IWRTLLSICKIHGNIEIAEK 770


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 273/833 (32%), Positives = 440/833 (52%), Gaps = 70/833 (8%)

Query: 72  LGLPLFGS-TLSSVLKTCGCLFDHV----------FGRQVHCECVKSGFARDVNVSTSLV 120
           L  PLF S +L++ L T    FD +            R VH + +K     D+ +  +L+
Sbjct: 80  LSEPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLK--LEEDIFLGNALI 137

Query: 121 DLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
             Y++   V D  +VF  ++  NVVS+T+L+SG++++   D  +ELF  M   GI+PN +
Sbjct: 138 SAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEY 197

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TF  +L             QVH +V+K G      +CNAL+ +Y K   +     +F+ M
Sbjct: 198 TFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEM 257

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA-GAELTRSTFVSVIKLCATTKELRLA 299
            +RD  +WN++++  V    + EAF+ F  M L  G ++   +  +++  CA + +    
Sbjct: 258 PERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKG 317

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +QLH+  LK G++   ++ + L+  Y+KCG   D + +F  M  ++DV++WT MI+ +++
Sbjct: 318 QQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETM-PIRDVITWTGMITSYME 376

Query: 360 NGAIDLAV-------------------------------NFFCQMTREGVRPNGFTYSII 388
            G +D AV                                 F +M  EGV  +  T + I
Sbjct: 377 FGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSI 436

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKD 443
           +TA   +  F    Q+   ++K     +  + TAL++ Y + G +++A K+F +   E D
Sbjct: 437 ITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEND 496

Query: 444 IVA-WSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQ 501
             A  ++M+ GYA+ G    A+ ++    SEG +  +E   +S+++ C +     E G Q
Sbjct: 497 YTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFH-EMGMQ 555

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H  ++K+ L     V +A V+MYSK  N++ A  VF     +D+VSWN ++ G+  H  
Sbjct: 556 MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQ 615

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHA--GLVDEGQQYFDIMVNEHHIYPTMEH 619
             KAL ++K+M +  ++ D ITF  +I+A  H    LVD  +  F  M  EH+I PT+EH
Sbjct: 616 GDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEH 675

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y+  + +  R G+LE+A   I  MP      VWR +L +CR              +++++
Sbjct: 676 YASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVE 735

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D   Y+L SN+Y+A+G W    +VR+ M ++  +K    SWI  +NK +SF A D SH
Sbjct: 736 PKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSH 795

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           PQ   IYS LE L       GY PDTS+VLQ++++  K+  L  HS +LA  FG++ T  
Sbjct: 796 PQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKP 855

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G P+QIVKN+R+CGDCH  +K +S + RR I++RDT+ FH F +G CSC DYW
Sbjct: 856 GKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 233/485 (48%), Gaps = 38/485 (7%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           N V Y  L+  + +     EA+ LF  +   G+     T  ++L  C    D+  G QVH
Sbjct: 160 NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVH 219

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
              VK G    V +  +L+ LY +   ++   R+F++M E ++ SW +++S   +    D
Sbjct: 220 GIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD 279

Query: 162 RVLELFHRMQV-EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
              + F  MQ+ +G+K + F+ ST+L   A         Q+H + +K G E   SV ++L
Sbjct: 280 EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSL 339

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM--------- 271
           I  Y K     D   +F+ M  RD ITW  M+  Y+   +   A E FN M         
Sbjct: 340 IGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYN 399

Query: 272 ----GLA------------------GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
               GL+                  G E++  T  S+I  C   K  ++++Q+   V+K 
Sbjct: 400 AVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKF 459

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS-WTAMISGHLQNGAIDLAVN 368
           GI  +  I T L+  Y++CG+MEDA KIF       D  +  T+MI G+ +NG ++ A++
Sbjct: 460 GILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAIS 519

Query: 369 FFCQMTREG-VRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAY 423
            F     EG +  +    + IL+   ++       Q+H H +K+       VG A ++ Y
Sbjct: 520 LFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMY 579

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K   +D+A +VF  ++ +DIV+W+ ++AG+      + A+ I++++   G+KP+  TF+
Sbjct: 580 SKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFA 639

Query: 484 SVINA 488
            +I+A
Sbjct: 640 LIISA 644



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 214/465 (46%), Gaps = 52/465 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGCLF 92
           LF+  P+R+   +N ++    ++  + EA + F G++   GL +   +LS++L  C    
Sbjct: 253 LFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSV 312

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT---- 148
             + G+Q+H   +K G    ++VS+SL+  Y +  +  D   +F+ M   +V++WT    
Sbjct: 313 KPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMIT 372

Query: 149 ---------------------------SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                                      ++L+G +RN    R LELF  M  EG++ +  T
Sbjct: 373 SYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCT 432

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF--DG 239
            ++++           + Q+   V+K G    + +  AL+ MY +   + DA  +F    
Sbjct: 433 LTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRS 492

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF-VSVIKLCATTKELRL 298
           +E+  +    SM+ GY  N    EA   F++    GA +       S++ LC +     +
Sbjct: 493 LENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEM 552

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             Q+H   LK+G+  +  +    +  YSKC  M+DA ++F+ M  M+D+VSW  +++GH+
Sbjct: 553 GMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMN-MQDIVSWNGLVAGHV 611

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHA-----------HIIKT 407
            +   D A+  + +M + G++P+  T+++I++A        V +           H IK 
Sbjct: 612 LHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKP 671

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAML 451
             E   S     ++   + G+L+EA +    +  E D+  W A+L
Sbjct: 672 TLEHYAS----FISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 160/331 (48%), Gaps = 12/331 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F++ P+RN + YN +L    R+     AL LF+ +   G+ +   TL+S++  CG L  
Sbjct: 386 VFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKS 445

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVSWTSLL 151
               +Q+    +K G   +  + T+LVD+Y R   +ED  ++F   +  N      TS++
Sbjct: 446 FKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMI 505

Query: 152 SGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            GYARN   +  + LFH  Q EG I  +    +++L +    G     +Q+H   +K+G 
Sbjct: 506 CGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGL 565

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              T V NA +SMY K   + DA  VF+ M  +D ++WN +VAG+V +    +A   +  
Sbjct: 566 ITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKK 625

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL------MVA 324
           M  AG +    TF  +I     T EL L     S  L   ++ +HNI+  L      +  
Sbjct: 626 MEKAGIKPDSITFALIISAYKHT-ELNLVDSCRS--LFVSMETEHNIKPTLEHYASFISV 682

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             + G +E+A +    M    DV  W A+++
Sbjct: 683 LGRWGLLEEAEQTIRNMPLEPDVYVWRALLN 713



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 87/158 (55%), Gaps = 2/158 (1%)

Query: 31  DQSLFDRSPQRNFVE-YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS-SVLKTC 88
           ++  + RS + ++      ++  Y R+    EA++LF   +  G  +    +S S+L  C
Sbjct: 485 EKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLC 544

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G +  H  G Q+HC  +KSG   +  V  + V +Y +  N++D  RVF+ MN  ++VSW 
Sbjct: 545 GSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWN 604

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL 186
            L++G+  +   D+ L ++ +M+  GIKP+S TF+ ++
Sbjct: 605 GLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALII 642


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/717 (34%), Positives = 388/717 (54%), Gaps = 64/717 (8%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           + P +F F +   +L + G  A    +H            SV   + S  + ++ + +A 
Sbjct: 29  LSPQTFIFHSSARLLPEAGACAAKKAIHRQ----------SVRGCVPSSSVIARGLHNAH 78

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV--SVIKLCAT 292
            VFDG   R    W S+++G      H +    F  M         + FV   V++ CA 
Sbjct: 79  RVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAG 138

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE--------- 343
             ++   R++H  +L++G+  D  +   ++  Y+KCG    A + F  M +         
Sbjct: 139 LGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIV 198

Query: 344 ---------------------MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                                ++DV SW  ++SG +++G    A+    QM R GV  + 
Sbjct: 199 IRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSN 258

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           +TYS++      +S      Q+H  ++    E+   VG +L++ Y K G ++ A  +F+ 
Sbjct: 259 YTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDR 318

Query: 439 ---IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
                E    AWS M+AGY Q G  E A++ +R++  EGV   +F  +SV +AC A +  
Sbjct: 319 WSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASAC-ANAGM 377

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           VEQG+Q H    K        ++SA+V MYSK G++E A  +F+  + +++  W +M+C 
Sbjct: 378 VEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCS 437

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           YA HG  + ALE+F  M+ + +  + IT + V++AC+H+GLV +G  YF++M  E+ I P
Sbjct: 438 YASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVP 497

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------------- 661
             EHY+CMVDLY RAG+L+KA + I     +  A VW+T+L+ACRL              
Sbjct: 498 NTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKL 557

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + L+ +D+  YVL+SNMYA    W +  ++R  M +R+V+K+ G SWI +KN  + F+A 
Sbjct: 558 VQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVAL 617

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP+S +IY+ LE+L  RLK+ GY   T  V+ DI++E +E  L  HSE+LAIAFG++
Sbjct: 618 DTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGII 677

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +TP G  L+I KNLRVC DCH  IK I++   R+IVVRD  RFHHFK+G CSC D+W
Sbjct: 678 STPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 222/498 (44%), Gaps = 41/498 (8%)

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTV 185
            + +  RVFD     ++ +WTS++SG AR   +   +  F  M  E     PN+F  + V
Sbjct: 73  GLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGV 132

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L   A  G V +  ++H  ++++G      +CNA++ MY K      AR  F  M  +D+
Sbjct: 133 LRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDA 192

Query: 246 I-------------------------------TWNSMVAGYVTNELHMEAFETFNNMGLA 274
                                           +WN++V+G + +    EA      M  A
Sbjct: 193 TSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRA 252

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G   +  T+  V  L        L RQLH +V+   ++ D  +   LM  Y KCG+ME A
Sbjct: 253 GVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESA 312

Query: 335 SKIFSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
             IF    +  +    +W+ M++G++QNG  + A+ FF +M REGV    F  + + +A 
Sbjct: 313 LSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASAC 372

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                     QVH  + K  +     + +A+++ Y K G L++A ++F     K++  W+
Sbjct: 373 ANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWT 432

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            ML  YA  G    A++I+ ++ +E + PNE T  +V++AC+      +    F+    +
Sbjct: 433 TMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEE 492

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALE 567
             +       + +V +Y + G ++ A    +  +   + V W +++     H H + A +
Sbjct: 493 YGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYA-Q 551

Query: 568 VFKEMRRQDLEFDGITFI 585
           +  E   Q  ++D  +++
Sbjct: 552 LASEKLVQLEQYDAGSYV 569



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 204/490 (41%), Gaps = 64/490 (13%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST------LSSVLKT 87
           +FD +P R+   +  ++    R+  H + +  F  +    L   G+T      L+ VL+ 
Sbjct: 80  VFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEM----LDECGATAPNAFVLAGVLRC 135

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR------------- 134
           C  L D   GR++H   ++SG   DV +  +++D+Y +  +    RR             
Sbjct: 136 CAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSW 195

Query: 135 ------------------VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
                             +FD+ +  +V SW +++SG  R+      L    +M   G+ 
Sbjct: 196 NIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVT 255

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
            +++T+S V  +           Q+H  V+    E    V  +L+ MY K   +  A ++
Sbjct: 256 FSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSI 315

Query: 237 FDG----MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           FD      EDR    W++MVAGYV N    EA E F  M   G    +    SV   CA 
Sbjct: 316 FDRWSDFTEDRQ-FAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACAN 374

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              +   RQ+H  V K G  FD  + + ++  YSK G +EDA +IF    + K+V  WT 
Sbjct: 375 AGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSA-QTKNVALWTT 433

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           M+  +  +G   +A+  F +M  E + PN  T   +L+A           H      E+ 
Sbjct: 434 MLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEY 493

Query: 413 FSVG-----TALLNAYVKKGILDEAAKVFELIDEKDI----VAWSAMLAGYAQIGDTEGA 463
             V        +++ Y + G+LD+A      I+E  I    V W  +L+        E  
Sbjct: 494 GIVPNTEHYNCMVDLYGRAGLLDKAKN---FIEENKISHEAVVWKTLLSACRLHKHIE-- 548

Query: 464 VKIYRQLTSE 473
              Y QL SE
Sbjct: 549 ---YAQLASE 555


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/620 (40%), Positives = 368/620 (59%), Gaps = 24/620 (3%)

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  R++++W ++V+G   N +H +A   F  M  AG   TR    S  +  A        
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            QLH   ++ G D +  + + L   YSKCG + +A ++F  M + KD V+WTAMI G+ +
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQ-KDAVAWTAMIDGYAK 119

Query: 360 NGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
           NG+++ AV  F  M REG V  +   +  +L+A   +        +H  + K  +E   +
Sbjct: 120 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 179

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEK--DIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
           V  AL++ Y K   ++ A++V + ID    ++V+ ++M+ GY +    E A+ IY +L  
Sbjct: 180 VRNALIDMYAKSMDVESASRVLK-IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 238

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           +GV+PNEFTFSS+I  C A  A +EQG Q HA  IK  L     V S LV MY K G I 
Sbjct: 239 QGVEPNEFTFSSMIKGC-AMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 297

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            + ++F     R  ++WN++I  +AQHGH ++A++ F  M    +  + I F+ ++TAC+
Sbjct: 298 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 357

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           HAGLVDEG +YF  M   H I P  EHYSC++D Y RAG L++A   I+ MP   +A  W
Sbjct: 358 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW 417

Query: 653 RTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
            ++L ACR              L+ L+P ++ I+V LS +YA+ G W++   VRKLM D 
Sbjct: 418 CSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDS 477

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
           ++KK  G+SW++   KT+ F + D SHPQ   IY KLEEL+TR+K+ GY PDTS++  ++
Sbjct: 478 RIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNL 537

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           +D  KE IL  HSER+A+AF L++ PA  P+ + KNLR+C DCHT  K I K+ERRDI+V
Sbjct: 538 EDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIV 597

Query: 819 RDTNRFHHFKEGLCSCGDYW 838
           RD +RFHHF  G CSCGDYW
Sbjct: 598 RDNSRFHHFVNGRCSCGDYW 617



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 216/427 (50%), Gaps = 18/427 (4%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M   N VSWT+L+SG ++N M+   L  F  M+  G+ P  F  S+     A  G     
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            Q+H + ++ G +    V + L  MY K  ++ +A  VFD M  +D++ W +M+ GY  N
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 259 ELHMEAFETFNNM---GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                A  +F +M   GL GA+  +  F SV+      K+  L++ +H  V K G + + 
Sbjct: 121 GSLEAAVLSFRDMKREGLVGAD--QHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEV 178

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            +R  L+  Y+K   +E AS++  +     +VVS T+MI G+++   ++ A+  + ++ R
Sbjct: 179 AVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRR 238

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           +GV PN FT+S ++      +      Q+HA +IKT+  +   VG+ L++ Y K G++  
Sbjct: 239 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISL 298

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           + ++F  I+ +  +AW+A++  +AQ G    A++ + ++   G++PN   F S++ AC+ 
Sbjct: 299 SMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSH 358

Query: 492 PSAAVEQGKQFH----ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDL 546
                E  K F+    A  I+ K  +  C+    +  Y + G ++ A +       K + 
Sbjct: 359 AGLVDEGLKYFYSMKEAHGIEPKEEHYSCI----IDTYGRAGRLDEAYKFISEMPIKPNA 414

Query: 547 VSWNSMI 553
             W S++
Sbjct: 415 YGWCSLL 421



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 214/445 (48%), Gaps = 37/445 (8%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P+RN V +  L+    ++ +H +AL  F  +RR G+      LSS  +    L   + G 
Sbjct: 2   PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 61

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+HC  V+ GF  ++ V+++L D+Y +   + +  RVFD M + + V+WT+++ GYA+N 
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 121

Query: 159 MNDRVLELFHRMQVEG-IKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVT 214
             +  +  F  M+ EG +  +   F +VL   G L D  +  +   +H  V K G E+  
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKS---IHCCVTKAGFELEV 178

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN-----SMVAGYVTNELHMEAFETFN 269
           +V NALI MY KS  V  A  V       D   WN     SM+ GY+  +   EA   + 
Sbjct: 179 AVRNALIDMYAKSMDVESASRVL----KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYV 234

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G E    TF S+IK CA    L    QLH+QV+K  +  D  + + L+  Y KCG
Sbjct: 235 ELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCG 294

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +  + ++F+ + E +  ++W A+I+   Q+G    A+  F +M   G+RPN   +  +L
Sbjct: 295 LISLSMQLFNEI-EYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLL 353

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTA------------LLNAYVKKGILDEAAK-VF 436
           TA         HA ++    +  +S+  A            +++ Y + G LDEA K + 
Sbjct: 354 TACS-------HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFIS 406

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTE 461
           E+  + +   W ++L      G  E
Sbjct: 407 EMPIKPNAYGWCSLLGACRMRGSKE 431



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 167/338 (49%), Gaps = 7/338 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTCGC 90
           +FD+ PQ++ V +  ++  Y ++   + A+  F  ++R G  L G+      SVL   G 
Sbjct: 98  VFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG--LVGADQHVFCSVLSASGG 155

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-DMNESNVVSWTS 149
           L D    + +HC   K+GF  +V V  +L+D+Y ++ +VE   RV   D    NVVS TS
Sbjct: 156 LKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTS 215

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GY      +  L ++  ++ +G++PN FTFS+++   A + ++    Q+H  VIK  
Sbjct: 216 MIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTD 275

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
               + V + L+ MY K  ++  +  +F+ +E R  I WN+++  +  +    EA + F+
Sbjct: 276 LIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFD 335

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            M  +G       FVS++  C+    +    +  +S    +GI+      + ++  Y + 
Sbjct: 336 RMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRA 395

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           G++++A K  S M    +   W +++      G+ +L 
Sbjct: 396 GRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELG 433


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/624 (37%), Positives = 371/624 (59%), Gaps = 20/624 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           ++ VF  +++ +   WN+M+ G V+ +   +A   + +M   G      T   V+K CA 
Sbjct: 67  SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR 126

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             ++RL  ++HS ++K G D D  ++T L+  Y KC   +DA K+F  + + K+VVSWTA
Sbjct: 127 KLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD-KNVVSWTA 185

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTN 408
           +I+G++ +G    A+  F ++   G++P+ F+   +L A        S   +  +I  + 
Sbjct: 186 IITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSG 245

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
             ++  V T+LL+ YVK G L+ A  +F  + EKDIV+WS M+ GYA  G  + A+ ++ 
Sbjct: 246 MGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFF 305

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+ SE +KP+ +T   V++AC A   A++ G    +   + +  +   + +AL+ MYSK 
Sbjct: 306 QMQSENLKPDCYTMVGVLSAC-ATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKC 364

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G++  A E+F   +K+D V WN+M+ G + +GH K    +F  + +  +  D  TFIG++
Sbjct: 365 GSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLL 424

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
             CTH G V+EG+Q+F+ M     + P++EHY CMVDL  RAG+L +A  +IN MP   +
Sbjct: 425 CGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPN 484

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A VW  +L  C+L              I L+P +S  YV LSN+Y+    W+E  ++R  
Sbjct: 485 AVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRST 544

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M +++++K    SWIE+    + FL GD SH  S +IY+KL+EL   LK  G+ P T +V
Sbjct: 545 MKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFV 604

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L DI++E KE  L  HSE+LA+AFGL+A+P    +++VKNLRVCGDCH  IKLISK+ +R
Sbjct: 605 LFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKR 664

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +I++RDTNRFH F +G CSC DYW
Sbjct: 665 EIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 223/450 (49%), Gaps = 16/450 (3%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           + VF  + E N+  W +++ G       D  + L+  M+  G  PN+FT   VL   A +
Sbjct: 68  KLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARK 127

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             V   +++H++++K G +    V  +L+S+Y+K     DA  VFD + D++ ++W +++
Sbjct: 128 LDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAII 187

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            GY+++    EA   F  +   G +    + V V+  CA   +      +   +  +G+ 
Sbjct: 188 TGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG 247

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            +  + T L+  Y KCG +E A+ IFS M E KD+VSW+ MI G+  NG    A++ F Q
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPE-KDIVSWSTMIQGYAFNGLPQQALDLFFQ 306

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M  E ++P+ +T   +L+A   +    +     + + +  +  +  +GTAL++ Y K G 
Sbjct: 307 MQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGS 366

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           + +A ++F  + +KD V W+AM+ G +  G  +    ++  +   G++P+E TF  ++  
Sbjct: 367 VTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCG 426

Query: 489 CTAPSAAVEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-R 542
           CT     V +G+QF        S+   + +  C    +V +  + G +  A ++      
Sbjct: 427 CTH-GGFVNEGRQFFNNMKRVFSLTPSIEHYGC----MVDLLGRAGLLNEAHQLINNMPM 481

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           K + V W +++ G   H  T  A +V K++
Sbjct: 482 KPNAVVWGALLGGCKLHKDTHLAEQVLKKL 511



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 215/444 (48%), Gaps = 9/444 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F +  + N   +N ++          +A++L+  +R  G      T+  VLK C    D
Sbjct: 70  VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G ++H   VK+G+  DV V TSL+ LY++ +N +D  +VFDD+ + NVVSWT++++G
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITG 189

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  +      +  F ++   G+KP+SF+   VL   A  G   +   +   +  +G    
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  +L+ MY+K   +  A  +F  M ++D ++W++M+ GY  N L  +A + F  M  
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS 309

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    T V V+  CAT   L L     S + +N    +  + T L+  YSKCG +  
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQ 369

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A +IF+ M++ KD V W AM+ G   NG      + F  + + G+RP+  T+ I L    
Sbjct: 370 AWEIFTAMKK-KDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF-IGLLCGC 427

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTA------LLNAYVKKGILDEAAKVFELIDEK-DIVA 446
               F         N ++ FS+  +      +++   + G+L+EA ++   +  K + V 
Sbjct: 428 THGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVV 487

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQL 470
           W A+L G     DT  A ++ ++L
Sbjct: 488 WGALLGGCKLHKDTHLAEQVLKKL 511


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 232/580 (40%), Positives = 366/580 (63%), Gaps = 21/580 (3%)

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  R+ + +++K C    +L+  + +H  VL +    D  I+  L+  Y++CG +E A +
Sbjct: 71  EPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARR 130

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M   +D+VSWT+MI+G+ QN     A+  F +M  +G  PN FT S ++     ++
Sbjct: 131 LFDEMPH-RDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            +    Q+HA   K     +  VG++L++ Y + G L EA  VF+ +  K+ V+W+A++A
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GYA+ G+ E A+ ++ ++  EG +P EFT+S+++++C++    +EQGK  HA  +K+   
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSS-MGCLEQGKWLHAHLMKSSQK 308

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               V + L+ MY+K G+I  A +VF +  K D+VS NSM+ GYAQHG  K+A + F EM
Sbjct: 309 LVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEM 368

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
            R  +E + ITF+ V+TAC+HA L+DEG+ YF +M  +++I P + HY+ +VDL  RAG+
Sbjct: 369 IRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVSHYATIVDLLGRAGL 427

Query: 633 LEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQPHDSAIYVLLSNM 678
           L++A   I  MP   +  +W  +L              AA R+  L P     + LL+N+
Sbjct: 428 LDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANI 487

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           YA+ G W++ A+VRK+M D  VKKE   SW+EV+N  + F+A D++HPQ  +I+   E+L
Sbjct: 488 YASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKL 547

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
           + ++K+ GY PDTS+VL  +D + KE  L  HSE+LA++F L+ TP G+ ++I+KN+RVC
Sbjct: 548 NQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVC 607

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCH+ IK +S + +R+I+VRDTNRFHHF +G CSCGDYW
Sbjct: 608 GDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 197/413 (47%), Gaps = 7/413 (1%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +++LK C  L     G+ VH   + S F  D+ +  SL+ +Y R  ++E  RR+FD+M  
Sbjct: 78  NTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMPH 137

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            ++VSWTS+++GYA+N      L LF RM  +G +PN FT S+++             Q+
Sbjct: 138 RDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQI 197

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H    K G      V ++L+ MY +   + +A  VFD +  ++ ++WN+++AGY      
Sbjct: 198 HACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEG 257

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            EA   F  M   G   T  T+ +++  C++   L   + LH+ ++K+       +   L
Sbjct: 258 EEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTL 317

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+K G + DA K+F  + ++ DVVS  +M+ G+ Q+G    A   F +M R G+ PN
Sbjct: 318 LHMYAKSGSIRDAEKVFDKLVKV-DVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPN 376

Query: 382 GFTYSIILTAQPAVSPFQVHAHII----KTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
             T+  +LTA           H      K N E   S    +++   + G+LD+A    E
Sbjct: 377 DITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIE 436

Query: 438 LID-EKDIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSEGVKPNEFTFSSVINA 488
            +  E  +  W A+L       +TE GA    R    +   P   T  + I A
Sbjct: 437 EMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYA 489



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 196/414 (47%), Gaps = 38/414 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P R+ V +  ++  Y ++    +AL LF  +   G      TLSS++K CG +  
Sbjct: 131 LFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMAS 190

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           +  GRQ+H  C K G   +V V +SLVD+Y R   + +   VFD +   N VSW +L++G
Sbjct: 191 YNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAG 250

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YAR    +  L LF RMQ EG +P  FT+S +L   +  G +     +H  ++K+  ++V
Sbjct: 251 YARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLV 310

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N L+ MY KS  +RDA  VFD +   D ++ NSM+ GY  + L  EA + F+ M  
Sbjct: 311 GYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIR 370

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E    TF+SV+  C+           H+++L  G  +      GLM  Y+   K+  
Sbjct: 371 FGIEPNDITFLSVLTACS-----------HARLLDEGKHY-----FGLMRKYNIEPKVSH 414

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
            + I  ++                 + G +D A +F  +M    + P    +  +L A  
Sbjct: 415 YATIVDLLG----------------RAGLLDQAKSFIEEMP---IEPTVAIWGALLGASK 455

Query: 394 AVSPFQVHAHIIKTNYEKSFS---VGTALLNAYVKKGILDEAAKVFELIDEKDI 444
                ++ A+  +  +E   S     T L N Y   G  ++ AKV +++ +  +
Sbjct: 456 MHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGV 509


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/657 (37%), Positives = 382/657 (58%), Gaps = 20/657 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH  +I +     T + N L+   L  +    +  +F   +  +   +N+++ G+V N 
Sbjct: 31  QVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNH 90

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  E  + F ++   G  L   TF  V+K C      +L   LHS V+K G + D    T
Sbjct: 91  LFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMT 150

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YS  G++ DA K+F  + E + VV+WTA+ SG+   G    A++ F +M   GVR
Sbjct: 151 SLLSIYSGSGRLNDAHKVFEEIPE-RSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVR 209

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+ +    +L+A   V        +  H+ +   +K+  V T L+N Y K G +++A  V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + EKDIV WS M+ GYA     +  ++ + Q+  E +KP++F+    +++C A   A
Sbjct: 270 FDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSC-ASLGA 328

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++ G+   +   + +    L +++AL+ MY+K G +    EVFK  +++D+V  N+ I G
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            A++GH K +  VF +  +  +  DG TF+G++  C HAGL+ +G ++F+ +   + +  
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------------- 661
           T+EHY CMVDL+ RAGML+ A  +I  MP   +A VW  +L+ CRL              
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           I+L+P ++  YV LSN+Y+ +G W E A VR +MN + +KK  GYSWIE++   + FLA 
Sbjct: 509 IALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLAD 568

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP S++IY+KLE+L   ++  G+ P T +V  D++DE KE +L  HSE+LA+AFGL+
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLI 628

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +T  G  +++VKNLRVCGDCH V+KLISK+ RR+IVVRD NRFH F  G CSC DYW
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 228/465 (49%), Gaps = 23/465 (4%)

Query: 23  RSPFYSKKDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           R+ F+ +   S  LF  +   N   YN L+  +  + L  E L+LFL IR+ GL L G T
Sbjct: 54  RTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFT 113

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
              VLK C    +   G  +H   VK GF  DV   TSL+ +Y  +  + D  +VF+++ 
Sbjct: 114 FPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIP 173

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E +VV+WT+L SGY     +   ++LF +M   G++P+S+    VL      G + +   
Sbjct: 174 ERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEW 233

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +   + +   +  + V   L+++Y K   +  AR+VFD M ++D +TW++M+ GY +N  
Sbjct: 234 IVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSF 293

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             E  E F  M     +  + + V  +  CA+   L L     S + ++    +  +   
Sbjct: 294 PKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG M    ++F  M+E KD+V   A ISG  +NG + L+   F Q  + G+ P
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTN--YEKSFSVGTAL----------LNAYVKKGI 428
           +G T+  +L          VHA +I+    +  + S   AL          ++ + + G+
Sbjct: 413 DGSTFLGLLCG-------CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465

Query: 429 LDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
           LD+A ++  ++    + + W A+L+G   + DT+ A  + ++L +
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIA 510


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/581 (39%), Positives = 363/581 (62%), Gaps = 23/581 (3%)

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  R+ +  ++  C   ++L+  R +H+ +  +  + D  +   ++  Y+KCG +E+A  
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M   KD+VSWT +ISG+ Q+G    A+  F +M   G +PN FT S +L A     
Sbjct: 162 LFDKM-PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKAS-GTG 219

Query: 397 PF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           P      Q+HA  +K  Y+ +  VG++LL+ Y +   + EA  +F  +  K++V+W+A++
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           AG+A+ G+ E  ++++ Q+  +G +P  FT+SSV  AC A S ++EQGK  HA  IK+  
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC-ASSGSLEQGKWVHAHVIKSGG 338

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                + + L+ MY+K G+I+ A +VF+R  K+D+VSWNS+I GYAQHG   +AL++F++
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 398

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M +  ++ + ITF+ V+TAC+H+GL+DEGQ YF++M  +H I   + H+  +VDL  RAG
Sbjct: 399 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAG 457

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
            L +A   I  MP   +A VW  +L +CR+                L PHDS  +VLLSN
Sbjct: 458 RLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 517

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA+ G   + A+VRK+M +  VKKE   SW+E++N+ + F+A D SHP   +I    E+
Sbjct: 518 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEK 577

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           +S ++K+ GY PDTS+VL  ++ + +E  L  HSE+LA+AF ++ TP G  ++I KN+R+
Sbjct: 578 ISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRI 637

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCH+  K  S++  R+I+VRDTNRFHHF  G+CSC DYW
Sbjct: 638 CGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 175/336 (52%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD+ P ++ V +  L+  Y +     EAL LF  +  LG      TLSS+LK  G  
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQ+H   +K G+  +V+V +SL+D+Y R  ++ + + +F+ +   NVVSW +L+
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    + V+ LF +M  +G +P  FT+S+V    A  G +     VH  VIK+GG+
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQ 339

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            +  + N LI MY KS  ++DA+ VF  +  +D ++WNS+++GY  + L  EA + F  M
Sbjct: 340 PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 399

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             A  +    TF+SV+  C+ +  L   +     + K+ I+        ++    + G++
Sbjct: 400 LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRL 459

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
            +A+K    M        W A++     +  +DL V
Sbjct: 460 NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGV 495



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 192/376 (51%), Gaps = 6/376 (1%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           S +L  C  L     GR +H     S F  D+ +   ++++Y +  ++E+ + +FD M  
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            ++VSWT L+SGY+++      L LF +M   G +PN FT S++L             Q+
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +K G ++   V ++L+ MY +   +R+A+ +F+ +  ++ ++WN+++AG+      
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
                 F  M   G E T  T+ SV   CA++  L   + +H+ V+K+G      I   L
Sbjct: 289 EHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 348

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+K G ++DA K+F  + + +D+VSW ++ISG+ Q+G    A+  F QM +  V+PN
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVK-QDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPN 407

Query: 382 GFTYSIILTA---QPAVSPFQVHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFE 437
             T+  +LTA      +   Q +  ++K +  E   +    +++   + G L+EA K  E
Sbjct: 408 EITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 467

Query: 438 LIDEKDIVA-WSAMLA 452
            +  K   A W A+L 
Sbjct: 468 EMPIKPTAAVWGALLG 483



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 89/167 (53%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ + +F+    +N V +N L+  + R    +  + LFL + R G      T SSV   C
Sbjct: 258 REAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTAC 317

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+ VH   +KSG      +  +L+D+Y ++ +++D ++VF  + + ++VSW 
Sbjct: 318 ASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWN 377

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           S++SGYA++ +    L+LF +M    ++PN  TF +VL   +  G++
Sbjct: 378 SIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLL 424


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/809 (33%), Positives = 439/809 (54%), Gaps = 25/809 (3%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           N  +++ C       A++    +  L +P+      ++++ C        G +V+     
Sbjct: 75  NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           S     + +  +L+ +++R  N+ D   VF  M + N+ SW  L+ GYA+  + D  L+L
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           +HRM   G+KP+ +TF  VL        +    ++H  VI+ G E    V NALI+MY+K
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVK 254

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              V  AR VFD M +RD I+WN+M++GY  N + +E    F  M     +    T  SV
Sbjct: 255 CGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSV 314

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           I  C    + RL RQ+H  VL+     D +I   L+  YS  G +E+A  +FS   E +D
Sbjct: 315 ITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRT-ECRD 373

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIK 406
           +VSWTAMISG+        A+  +  M  EG+ P+  T +I+L+A   +    +  ++ +
Sbjct: 374 LVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHE 433

Query: 407 TNYEK---SFS-VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
              +K   S+S V  +L++ Y K   +D+A ++F    EK+IV+W++++ G         
Sbjct: 434 VAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFE 493

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+  +R++    +KPN  T   V++AC A   A+  GK+ HA +++  ++    + +A++
Sbjct: 494 ALFFFREMIRR-LKPNSVTLVCVLSAC-ARIGALTCGKEIHAHALRTGVSFDGFMPNAIL 551

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY + G +E A + F      ++ SWN ++ GYA+ G    A E+F+ M   ++  + +
Sbjct: 552 DMYVRCGRMEYAWKQF-FSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEV 610

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           TFI ++ AC+ +G+V EG +YF+ M  ++ I P ++HY+C+VDL  R+G LE+A + I +
Sbjct: 611 TFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQK 670

Query: 643 MPFAASATVWRTVLAACRLIS------------LQPHDSAI--YVLLSNMYAATGHWQER 688
           MP      VW  +L +CR+               Q   +++  Y+LLSN+YA  G W + 
Sbjct: 671 MPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKV 730

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
           A VRK+M    +  + G SW+EVK   ++FL+ D  HPQ  +I + LE    ++K+AG +
Sbjct: 731 AEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVE 790

Query: 749 -PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            P++S++  DI +  K  I   HSERLAI FGL+ +  G P+ + KNL +C  CH ++K 
Sbjct: 791 GPESSHM--DIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKF 848

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
           IS+  RR+I VRD  +FHHFK G+CSC D
Sbjct: 849 ISREVRREISVRDAEQFHHFKGGICSCTD 877



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 273/558 (48%), Gaps = 13/558 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F R  +RN   +N L+  Y +  L  EAL+L+  +  +G+     T   VL+TCG + +
Sbjct: 163 VFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPN 222

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            V GR++H   ++ GF  DV+V  +L+ +Y++  +V   R VFD M   + +SW +++SG
Sbjct: 223 LVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISG 282

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N +    L LF  M    + P+  T ++V+      G      Q+H  V++      
Sbjct: 283 YFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRD 342

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            S+ N+LI MY    ++ +A  VF   E RD ++W +M++GY    +  +A ET+  M  
Sbjct: 343 PSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEA 402

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G      T   V+  C+    L +   LH    + G+     +   L+  Y+KC  ++ 
Sbjct: 403 EGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDK 462

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A +IF    E K++VSWT++I G   N     A+ FF +M R  ++PN  T   +L+A  
Sbjct: 463 ALEIFHSTLE-KNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACA 520

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +       ++HAH ++T       +  A+L+ YV+ G ++ A K F  +D  ++ +W+ 
Sbjct: 521 RIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDH-EVTSWNI 579

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +L GYA+ G    A ++++++    V PNE TF S++ AC+      E  + F++   K 
Sbjct: 580 LLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKY 639

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEV 568
            +   L   + +V +  + G +E A E  ++   K D   W +++     H H +     
Sbjct: 640 SIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVE----- 694

Query: 569 FKEMRRQDLEFDGITFIG 586
             E+  +++  D  T +G
Sbjct: 695 LGELAAENIFQDDTTSVG 712



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 22/344 (6%)

Query: 25  PFYS-----KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           P YS     ++ +++F R+  R+ V +  ++  Y    + Q+AL  +  +   G+     
Sbjct: 351 PMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEI 410

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T++ VL  C CL +   G  +H    + G      V+ SL+D+Y +   ++    +F   
Sbjct: 411 TIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHST 470

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLE--LFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            E N+VSWTS++ G    ++N+R  E   F R  +  +KPNS T   VL   A  G +  
Sbjct: 471 LEKNIVSWTSIILGL---RINNRCFEALFFFREMIRRLKPNSVTLVCVLSACARIGALTC 527

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             ++H   ++ G      + NA++ MY++   +  A   F  + D +  +WN ++ GY  
Sbjct: 528 GKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAE 586

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                 A E F  M  +       TF+S+  LCA ++   +A  L      N + + ++I
Sbjct: 587 RGKGAHATELFQRMVESNVSPNEVTFISI--LCACSRSGMVAEGLE---YFNSMKYKYSI 641

Query: 318 RTGL------MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
              L      +    + GK+E+A +    M    D   W A+++
Sbjct: 642 MPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLN 685


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/706 (36%), Positives = 390/706 (55%), Gaps = 20/706 (2%)

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           AL  +L +   G+     T   V+K C  L     G+ VH      G   DV V +SL+ 
Sbjct: 42  ALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIK 101

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           LY    ++ D + +FD++ + + V W  +L+GY +N  +   +++F  M+   IKPNS T
Sbjct: 102 LYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVT 161

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F+ VL V A E ++    Q+H + +  G E+ + V N L++MY K + ++ AR +FD   
Sbjct: 162 FACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSP 221

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
             D ++WN +++GYV N L  EA   F  M  AG +    TF S +        L+  ++
Sbjct: 222 QSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKE 281

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H  ++++ +  D  +++ L+  Y KC  +E A KI        D V  T MISG++ NG
Sbjct: 282 IHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSF-DTVVCTTMISGYVLNG 340

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGT 417
               A+  F  + +E ++P   T+S I  A   ++      ++H  IIKT  ++   VG+
Sbjct: 341 KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGS 400

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           A+L+ Y K G LD A +VF  I EKD + W++M+   +Q G    A+ ++RQ+  EG + 
Sbjct: 401 AILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           +  + S  ++AC A   A+  GK+ H   IK  L + L   S+L+ MY+K GN+  +  V
Sbjct: 461 DCVSISGALSAC-ANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRV 519

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           F R ++R+ VSWNS+I  Y  HG  K+ L +F EM R  ++ D +TF+G+I+AC HAG V
Sbjct: 520 FDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQV 579

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           DEG +Y+ +M  E+ I   MEHY+C+ D++ RAG L++A + IN MPF   A VW T+L 
Sbjct: 580 DEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLG 639

Query: 658 AC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
           AC               L  L P +S  YVLL+N+ A  G W++  +VR +M +R V+K 
Sbjct: 640 ACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKV 699

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
            GYSWIEV N T+ F+A D SHP + QIYS L+ L   LK  GY P
Sbjct: 700 PGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVP 745



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 276/544 (50%), Gaps = 14/544 (2%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y+RT +++D + +F  +      +W  ++ G+      +  L  + +M   G+ P+ +T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F  V+        V     VH  V   G +    V ++LI +Y ++  + DA+ +FD + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +DS+ WN M+ GYV N     A + F  M  +  +    TF  V+ +CA+   L L  Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LH   +  G++ D  +   L+  YSKC  ++ A K+F    +  D+VSW  +ISG++QNG
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQ-SDLVSWNGIISGYVQNG 239

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFS 414
            +  A + F  M   G++P+  T++  L   P V+         ++H +II+        
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFL---PCVNELLSLKHCKEIHGYIIRHAVVLDVF 296

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           + +AL++ Y K   ++ A K+       D V  + M++GY   G  + A++ +R L  E 
Sbjct: 297 LKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +KP   TFSS+  A  A  AA+  GK+ H   IK KL+    V SA++ MY+K G ++ A
Sbjct: 357 MKPTSVTFSSIFPA-FAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLA 415

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
             VF R  ++D + WNSMI   +Q+G   +A+ +F++M  +   +D ++  G ++AC + 
Sbjct: 416 CRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANL 475

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
             +  G++   +M+ +  +   +   S ++D+Y++ G L  +  + +RM    +   W +
Sbjct: 476 PALHYGKEIHGLMI-KGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-ERNEVSWNS 533

Query: 655 VLAA 658
           +++A
Sbjct: 534 IISA 537



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 271/543 (49%), Gaps = 14/543 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD  PQ++ V +N +L  Y ++     A+ +FL +R   +     T + VL  C   
Sbjct: 113 QYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASE 172

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H   V  G   D  V+ +L+ +Y +   ++  R++FD   +S++VSW  ++
Sbjct: 173 AMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGII 232

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +N +      LF  M   GIKP+S TF++ L  + +   +    ++H  +I++   
Sbjct: 233 SGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVV 292

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   + +ALI +Y K + V  A+ +       D++   +M++GYV N  + EA E F  +
Sbjct: 293 LDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWL 352

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                + T  TF S+    A    L L ++LH  ++K  +D   ++ + ++  Y+KCG++
Sbjct: 353 VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRL 412

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A ++F+ + E KD + W +MI+   QNG    A+N F QM  EG R +  + S  L+A
Sbjct: 413 DLACRVFNRITE-KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSA 471

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       ++H  +IK          ++L++ Y K G L+ + +VF+ + E++ V+W
Sbjct: 472 CANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSW 531

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS- 506
           +++++ Y   GD +  + ++ ++   G++P+  TF  +I+AC       E  + +H  + 
Sbjct: 532 NSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591

Query: 507 ---IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
              I A++ +  CV+     M+ + G ++ A E         D   W +++     HG+ 
Sbjct: 592 EYGIPARMEHYACVAD----MFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNV 647

Query: 563 KKA 565
           + A
Sbjct: 648 ELA 650


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/624 (37%), Positives = 371/624 (59%), Gaps = 20/624 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           ++ VF  +++ +   WN+M+ G V+ +   +A   + +M   G      T   V+K CA 
Sbjct: 67  SKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACAR 126

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             ++RL  ++HS ++K G D D  ++T L+  Y KC   +DA K+F  + + K+VVSWTA
Sbjct: 127 KLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPD-KNVVSWTA 185

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTN 408
           +I+G++ +G    A+  F ++   G++P+ F+   +L A        S   +  +I  + 
Sbjct: 186 IITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSG 245

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
             ++  V T+LL+ YVK G L+ A  +F  + EKDIV+WS M+ GYA  G  + A+ ++ 
Sbjct: 246 MGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFF 305

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+ SE +KP+ +T   V++AC A   A++ G    +   + +  +   + +AL+ MYSK 
Sbjct: 306 QMQSENLKPDCYTMVGVLSAC-ATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKC 364

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G++  A E+F   +++D V WN+M+ G + +GH K    +F  + +  +  D  TFIG++
Sbjct: 365 GSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLL 424

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
             CTH G V+EG+Q+F+ M     + P++EHY CMVDL  RAG+L +A  +IN MP   +
Sbjct: 425 CGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPN 484

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A VW  +L  C+L              I L+P +S  YV LSN+Y+    W+E  ++R  
Sbjct: 485 AVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRST 544

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M +++++K    SWIE+    + FL GD SH  S +IY+KL+EL   LK  G+ P T +V
Sbjct: 545 MKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFV 604

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L DI++E KE  L  HSE+LA+AFGL+A+P    +++VKNLRVCGDCH  IKLISK+ +R
Sbjct: 605 LFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKR 664

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +I++RDTNRFH F +G CSC DYW
Sbjct: 665 EIIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 222/450 (49%), Gaps = 16/450 (3%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           + VF  + E N+  W +++ G       D  + L+  M+  G  PN+FT   VL   A +
Sbjct: 68  KLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARK 127

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             V   +++H++++K G +    V  +L+S+Y+K     DA  VFD + D++ ++W +++
Sbjct: 128 LDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAII 187

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            GY+++    EA   F  +   G +    + V V+  CA   +      +   +  +G+ 
Sbjct: 188 TGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMG 247

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            +  + T L+  Y KCG +E A+ IFS M E KD+VSW+ MI G+  NG    A++ F Q
Sbjct: 248 RNVFVATSLLDMYVKCGNLERANLIFSAMPE-KDIVSWSTMIQGYAFNGLPQQALDLFFQ 306

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M  E ++P+ +T   +L+A   +    +     + + +  +  +  +GTAL++ Y K G 
Sbjct: 307 MQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGS 366

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           + +A ++F  +  KD V W+AM+ G +  G  +    ++  +   G++P+E TF  ++  
Sbjct: 367 VTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCG 426

Query: 489 CTAPSAAVEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-R 542
           CT     V +G+QF        S+   + +  C    +V +  + G +  A ++      
Sbjct: 427 CTH-GGFVNEGRQFFNNMKRVFSLTPSIEHYGC----MVDLLGRAGLLNEAHQLINNMPM 481

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           K + V W +++ G   H  T  A +V K++
Sbjct: 482 KPNAVVWGALLGGCKLHKDTHLAEQVLKKL 511



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 214/444 (48%), Gaps = 9/444 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F +  + N   +N ++          +A++L+  +R  G      T+  VLK C    D
Sbjct: 70  VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G ++H   VK+G+  DV V TSL+ LY++ +N +D  +VFDD+ + NVVSWT++++G
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITG 189

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  +      +  F ++   G+KP+SF+   VL   A  G   +   +   +  +G    
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  +L+ MY+K   +  A  +F  M ++D ++W++M+ GY  N L  +A + F  M  
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQS 309

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    T V V+  CAT   L L     S + +N    +  + T L+  YSKCG +  
Sbjct: 310 ENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQ 369

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A +IF+ M+  KD V W AM+ G   NG      + F  + + G+RP+  T+ I L    
Sbjct: 370 AWEIFTAMKR-KDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF-IGLLCGC 427

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTA------LLNAYVKKGILDEAAKVFELIDEK-DIVA 446
               F         N ++ FS+  +      +++   + G+L+EA ++   +  K + V 
Sbjct: 428 THGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVV 487

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQL 470
           W A+L G     DT  A ++ ++L
Sbjct: 488 WGALLGGCKLHKDTHLAEQVLKKL 511


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/854 (31%), Positives = 446/854 (52%), Gaps = 91/854 (10%)

Query: 41  RNFVEYNRLLFEYCR---DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           RN++ +N  + E+     DS   E L +F  +   G+      L+ VLK C  L +   G
Sbjct: 93  RNYLLWNSFIEEFASFGGDS--HEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLG 150

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
            +VH   VK GF  DV++S +L++LY +   ++   +VFD+        W +++    R+
Sbjct: 151 MEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRS 210

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
           +  +  LELF RMQ    K    T   +L        +    Q+H  VI+ G    TS+C
Sbjct: 211 EKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSIC 270

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+++SMY ++  +  AR  FD  ED +S +WNS+++ Y  N+    A++    M  +G +
Sbjct: 271 NSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVK 330

Query: 278 -------------LTRSTFVSVI-------------KLCATTKELR---------LARQL 302
                        L + ++ +V+               C+ T  L+         L +++
Sbjct: 331 PDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEI 390

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H  ++++ +++D  + T L+  Y K   ++ A  +F   +  K++ +W ++ISG+   G 
Sbjct: 391 HGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKN-KNICAWNSLISGYTYKGL 449

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNA 422
            D A     QM  EG++P+  T++                               +L++ 
Sbjct: 450 FDNAEKLLNQMKEEGIKPDLVTWN-------------------------------SLVSG 478

Query: 423 YVKKGILDEAAKVFELIDE----KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           Y   G  +EA  V   I       ++V+W+AM++G  Q  +   A++ + Q+  E VKPN
Sbjct: 479 YSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPN 538

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
             T  +++ AC A S+ ++ G++ H  S++    + + +++AL+ MY K G ++ A EVF
Sbjct: 539 STTICTLLRAC-AGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVF 597

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
           +  +++ L  WN M+ GYA +GH ++   +F EMR+  +  D ITF  +++ C ++GLV 
Sbjct: 598 RNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVM 657

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +G +YFD M  +++I PT+EHYSCMVDL  +AG L++A+D I+ +P  A A++W  VLAA
Sbjct: 658 DGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAA 717

Query: 659 CRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           CRL              + L+P++SA Y L+ N+Y+    W +  R+++ M    VK   
Sbjct: 718 CRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPN 777

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
            +SWI+VK   + F     SHP+  +IY +L +L + +K  GY  D + V Q+IDD  KE
Sbjct: 778 VWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNIDDSEKE 837

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
            +L  H+E+LA+ +GL+ T  G+P+++VKN R+C DCHT  K IS    R+I +RD  RF
Sbjct: 838 KVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRDGGRF 897

Query: 825 HHFKEGLCSCGDYW 838
           HHF  G CSC D W
Sbjct: 898 HHFMNGECSCKDRW 911



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/575 (24%), Positives = 252/575 (43%), Gaps = 78/575 (13%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD +P +    +N ++    R    ++AL LF  ++         T+  +L+ CG L  
Sbjct: 188 VFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRA 247

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   ++ G   + ++  S+V +Y R N +E  R  FD   + N  SW S++S 
Sbjct: 248 LNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISS 307

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL----------------------GVLAD 191
           YA N   +   +L   M+  G+KP+  T++++L                      G   D
Sbjct: 308 YAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPD 367

Query: 192 EGIVATAVQ-------------VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
              + +A+Q             +H  ++++  E    VC +L+  Y+K+  +  A  VF 
Sbjct: 368 SCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFH 427

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
             ++++   WNS+++GY    L       F+N                            
Sbjct: 428 HTKNKNICAWNSLISGYTYKGL-------FDN---------------------------- 452

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM---KDVVSWTAMIS 355
           A +L +Q+ + GI  D      L+  YS  G+ E+A  + + ++ +    +VVSWTAMIS
Sbjct: 453 AEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMIS 512

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
           G  QN     A+ FF QM  E V+PN  T   +L A    S      ++H   ++  +  
Sbjct: 513 GCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLD 572

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              + TAL++ Y K G L  A +VF  I EK +  W+ M+ GYA  G  E    ++ ++ 
Sbjct: 573 DIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMR 632

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
             GV+P+  TF+++++ C      ++  K F +      +N  +   S +V +  K G +
Sbjct: 633 KTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFL 692

Query: 532 ESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           + A + +    +K D   W +++     H   K A
Sbjct: 693 DEALDFIHAVPQKADASIWGAVLAACRLHKDIKIA 727



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/639 (22%), Positives = 279/639 (43%), Gaps = 93/639 (14%)

Query: 92  FDHVFG--------RQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           F H FG        R++H + +K    R+ V +  S++  Y++  + E   +VF      
Sbjct: 34  FFHPFGEIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKVFFVGFAR 93

Query: 143 NVVSWTSLLSGYAR-NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
           N + W S +  +A     +  +L +F  +  +G+K +S   + VL +      +   ++V
Sbjct: 94  NYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEV 153

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  ++K G  V   +  ALI++Y K   +  A  VFD    ++   WN++V   + +E  
Sbjct: 154 HACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKW 213

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +A E F  M  A A+ T  T V +++ C   + L   +Q+H  V++ G   + +I   +
Sbjct: 214 EDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSI 273

Query: 322 MVAYSKCGKMEDASKIF----------------------------SMMREMK------DV 347
           +  YS+  ++E A   F                             +++EM+      D+
Sbjct: 274 VSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDI 333

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           ++W +++SGHL  G+ +  +  F  +   G +P+  + +  L A   +  F    ++H +
Sbjct: 334 ITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGY 393

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I+++  E    V T+L++ Y+K   LD+A  VF     K+I AW+++++GY   G  + A
Sbjct: 394 IMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNA 453

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
            K+  Q+  EG+KP+  T++S                                    LV+
Sbjct: 454 EKLLNQMKEEGIKPDLVTWNS------------------------------------LVS 477

Query: 524 MYSKKGNIESASEVFKRQRKRDL----VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
            YS  G  E A  V  R +   L    VSW +MI G  Q+ +   AL+ F +M+ ++++ 
Sbjct: 478 GYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKP 537

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           +  T   ++ AC  + L+  G++        H     +   + ++D+Y + G L+ A ++
Sbjct: 538 NSTTICTLLRACAGSSLLKIGEE-IHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEV 596

Query: 640 INRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNM 678
              +    +   W  ++      ++  H   ++ L   M
Sbjct: 597 FRNIK-EKTLPCWNCMMMG---YAIYGHGEEVFTLFDEM 631



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/377 (21%), Positives = 163/377 (43%), Gaps = 51/377 (13%)

Query: 391 AQPAVSPF--------------QVHAHIIKTNYEKSF-SVGTALLNAYVKKGILDEAAKV 435
           + P  SPF              ++HA IIK   +++  ++  +++  Y++ G  + A KV
Sbjct: 27  SPPKFSPFFHPFGEIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFGDFESATKV 86

Query: 436 FELIDEKDIVAWSAMLAGYAQI-GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           F +   ++ + W++ +  +A   GD+   + ++++L  +GVK +    + V+  C A   
Sbjct: 87  FFVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLAL-M 145

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +  G + HAC +K   +  + +S AL+ +Y K   I+ A++VF     ++   WN+++ 
Sbjct: 146 ELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVM 205

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
              +    + ALE+F+ M+    +    T + ++ AC     ++EG+Q    ++    + 
Sbjct: 206 ANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVS 265

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVL 674
            T    S +V +YSR   LE                     LA     S + H+SA +  
Sbjct: 266 NTSICNS-IVSMYSRNNRLE---------------------LARVAFDSTEDHNSASWNS 303

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           + + YA          + + M    VK +   +W        S L+G +       + + 
Sbjct: 304 IISSYAVNDCLNGAWDLLQEMESSGVKPDI-ITW-------NSLLSGHLLQGSYENVLTN 355

Query: 735 LEELSTRLKDAGYKPDT 751
              L +    AG+KPD+
Sbjct: 356 FRSLQS----AGFKPDS 368


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/751 (34%), Positives = 412/751 (54%), Gaps = 39/751 (5%)

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV--LELFHRMQVEGIKPNSF 180
           ++ + ++     +FD +   +V ++  L+  Y+ +        L L+ RM    + PN++
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TF   L   +          +H   I  G +    V  AL+ MY+K   + DA  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL--TRSTFVSVIKLCATTKELRL 298
             RD + WN+M+AGY  + ++  A     +M +    L    ST V+++ L A    L  
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 299 ARQLHSQVLKNGIDFDHN----------IRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
              +H+  ++  +  + N          + T L+  Y+KCG +  A ++F  M   ++ V
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM-PARNEV 305

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVH 401
           +W+A+I G +    +  A   F  M  +G+     + + I +A  A +         Q+H
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLRMGEQLH 363

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           A + K+      + G +LL+ Y K G++D+A  +F+ +  KD V++SA+++GY Q G  E
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A  +++++ +  V+P+  T  S+I AC+   AA++ G+  H   I   L +   + +AL
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSH-LAALQHGRCSHGSVIIRGLASETSICNAL 482

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + MY+K G I+ + +VF     RD+VSWN+MI GY  HG  K+A  +F EM       DG
Sbjct: 483 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDG 542

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +TFI +++AC+H+GLV EG+ +F +M + + + P MEHY CMVDL SR G L++A + I 
Sbjct: 543 VTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQ 602

Query: 642 RMPFAASATVWRTVLAACRLI--------------SLQPHDSAIYVLLSNMYAATGHWQE 687
            MP  A   VW  +L ACR+                L P  +  +VLLSN+Y+A G + E
Sbjct: 603 SMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDE 662

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
            A VR +   +  KK  G SWIE+    ++F+ GD SHPQS +IY +L+ +   +K  GY
Sbjct: 663 AAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGY 722

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
           +PDTS+VLQD+++E KE  L  HSE+LAIA+G+++      + + KNLRVCGDCHTVIK 
Sbjct: 723 QPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKH 782

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           IS L+RR I+VRD NRFHHFK G CSCGD+W
Sbjct: 783 ISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 170/633 (26%), Positives = 307/633 (48%), Gaps = 50/633 (7%)

Query: 11  INPQTKQPPKSLR--------------SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRD 56
           ++P   QPP++                +  +  +   LFD+ P  +   YN L+  Y   
Sbjct: 42  LHPPPLQPPRASASASASLLLQLQDHIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSS 101

Query: 57  SLHQEA--LNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
           S    A  L+L+  + R  +     T    LK C  L DH  GR +H   + +G   D+ 
Sbjct: 102 SPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLF 161

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE--LFHRMQV 172
           VST+L+D+Y++   + D   +F  M   ++V+W ++L+GYA + M    +   L  +MQ+
Sbjct: 162 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 221

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI-------KNGGEVVTS---VCNALIS 222
             ++PN+ T   +L +LA +G +A    VH   I       +N    +T    +  AL+ 
Sbjct: 222 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLD 281

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG-AELTRS 281
           MY K   +  AR VFD M  R+ +TW++++ G+V      +AF  F  M   G   L+ +
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           +  S ++ CA+   LR+  QLH+ + K+G+  D      L+  Y+K G ++ A  +F  M
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-- 399
             +KD VS++A++SG++QNG  + A   F +M    V P+  T   ++ A   ++  Q  
Sbjct: 402 -AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 460

Query: 400 --VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
              H  +I        S+  AL++ Y K G +D + +VF ++  +DIV+W+ M+AGY   
Sbjct: 461 RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIH 520

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC----SIKAKLNN 513
           G  + A  ++ ++ + G  P+  TF  +++AC+     +E    FH       +  ++ +
Sbjct: 521 GLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEH 580

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +C    +V + S+ G ++ A E  +    R D+  W +++ G  +     K +++ K++
Sbjct: 581 YIC----MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL-GACR---VYKNIDLGKKV 632

Query: 573 RR--QDLEFDGI-TFIGVITACTHAGLVDEGQQ 602
            R  Q+L  +G   F+ +    + AG  DE  +
Sbjct: 633 SRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 665


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/626 (38%), Positives = 373/626 (59%), Gaps = 22/626 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR +F  M++ D    N+M+ GY  ++   EA   +  M   G  +   T+  V+  CA 
Sbjct: 64  ARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACAR 123

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              ++L R+ H +VLKNG   D  +   L+  Y  CG    A  +F     ++DVV+W  
Sbjct: 124 LGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE-STVRDVVTWNI 182

Query: 353 MISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
           MI+ HL  G  + A +   +MT+ + +RP+  T   ++ A   +   +    +H++  + 
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKEL 242

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
             +++  V  A+L+ Y K   ++ A +VF  I EKD+++W++ML+G A+ G  + A+ ++
Sbjct: 243 GLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALF 302

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           +++    ++ +E T   V++AC A + A++QGK  H    K ++N  L + +ALV MY+K
Sbjct: 303 QKMQLNKIELDEITLVGVLSAC-AQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAK 361

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G+I+ A +VF+R R R++ +WN++I G A HGH + A+ +F +M    L  D +TFI +
Sbjct: 362 CGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIAL 421

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+HAGLVDEG   F  M N+  I P MEHY C+VDL  RA  ++ A+  I  MP  A
Sbjct: 422 LCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKA 481

Query: 648 SATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           ++ +W T+L AC              R+I L+P     YV+LSN+YA    W    ++RK
Sbjct: 482 NSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRK 541

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK-DAGYKPDTS 752
            M ++ ++K  G SWIE+    + F+AGD SH Q+ QIY+ +EE++ R+  D G+ P T+
Sbjct: 542 QMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTA 601

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
            VL DI++E KE  L  HSE+LAIA GL++TP+G+P++IVKNLRVC DCH+ +K+ SK+ 
Sbjct: 602 NVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVY 661

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R+IV RD +RFHHFKEG CSC D+W
Sbjct: 662 NREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 216/472 (45%), Gaps = 9/472 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYM--RTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +Q H   +++    +   S+ L+       + ++   R++F  M   +     +++ GYA
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           R++     + L++ M   G+  +++T+  VL   A  G V    + H  V+KNG      
Sbjct: 88  RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLA 274
           V NALI  Y        A  VFD    RD +TWN M+  ++   L  +AF+  + M  L 
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                  T VS++  CA    L   + LHS   + G+D +  +   ++  Y KC  +E A
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            ++F+ +RE KDV+SWT+M+SG  ++G    A+  F +M    +  +  T   +L+A   
Sbjct: 268 QEVFNRIRE-KDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQ 326

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                    +H  I K        + TAL++ Y K G +D A +VF  +  +++  W+A+
Sbjct: 327 TGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAL 386

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           + G A  G  E A+ ++ Q+  + + P++ TF +++ AC+      E    F A   K +
Sbjct: 387 IGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQ 446

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
           +   +     +V +  +   ++ A    +    K + V W +++      GH
Sbjct: 447 IEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 498



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 207/433 (47%), Gaps = 12/433 (2%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           N ++  Y R     EA++L+  +   G+P+   T   VL  C  L     GR+ HCE +K
Sbjct: 80  NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLK 139

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           +GF  D+ V  +L+  Y    +      VFD+    +VV+W  +++ +    ++++  +L
Sbjct: 140 NGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDL 199

Query: 167 FHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
              M +++ ++P+  T  +++   A  G +     +H+   + G +    V NA++ MY 
Sbjct: 200 LDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYC 259

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   +  A+ VF+ + ++D ++W SM++G   +    EA   F  M L   EL   T V 
Sbjct: 260 KCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVG 319

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+  CA T  L   + +H  + K  I+ D  + T L+  Y+KCG ++ A ++F  MR ++
Sbjct: 320 VLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR-VR 378

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPF 398
           +V +W A+I G   +G  + A++ F QM  + + P+  T+  +L A          ++ F
Sbjct: 379 NVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF 438

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQI 457
           Q   +  K   E        +++   +   +D+A    E +  K + V W+ +L      
Sbjct: 439 QAMKN--KFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSG 496

Query: 458 GDTEGAVKIYRQL 470
           G  + A KI R++
Sbjct: 497 GHFDLAEKIGRRV 509



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 129/284 (45%), Gaps = 5/284 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +F+R  +++ + +  +L    +    QEAL LF  ++   + L   TL  VL  C   
Sbjct: 268 QEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQT 327

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ +H    K     D+ + T+LVD+Y +  +++   +VF  M   NV +W +L+
Sbjct: 328 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALI 387

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A +   +  + LF +M+ + + P+  TF  +L   +  G+V   + +    +KN  +
Sbjct: 388 GGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQ-AMKNKFQ 446

Query: 212 VVTSV--CNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAGYVTNELHMEAFETF 268
           +   +     ++ +  +++ V DA A  + M  + +S+ W +++ G   +  H +  E  
Sbjct: 447 IEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL-GACRSGGHFDLAEKI 505

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
               +     +   +V +  L A   +   A +L  Q+   GI+
Sbjct: 506 GRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIE 549



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 32/181 (17%)

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMY--SKKGNIESASEVFKRQRKRDLVSWNSM 552
           ++ + KQ HA  ++  L +    SS L++    S  G++  A ++F + +  D    N+M
Sbjct: 23  SISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTM 82

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF-------- 604
           I GYA+  +  +A+ ++  M  + +  D  T+  V+ AC   G V  G+++         
Sbjct: 83  IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142

Query: 605 --DIMVNEHHI--YPTMEHYSCMVDLYSRA------------------GMLEKAMDIINR 642
             D+ V    I  Y     + C  D++  +                  G+ EKA D+++ 
Sbjct: 143 GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202

Query: 643 M 643
           M
Sbjct: 203 M 203


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 274/887 (30%), Positives = 471/887 (53%), Gaps = 92/887 (10%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-----RRLGLPLFGSTLSS 83
           ++ + +FD  P R+ + +N ++  YC   + ++A  LF  I     R   + L G     
Sbjct: 50  REAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARLG 109

Query: 84  VLKTCGCLFDHVFGRQ-------VHCECVKSG------------FARDVNVSTSLVDLYM 124
            +     +FD +  R        V C  V++G             +RDV    S+V  Y 
Sbjct: 110 RVLDARRVFDGMPERNTVAWNAMVSCY-VQNGDITMARRLFDAMPSRDVTSWNSMVTGYC 168

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
            +  + D   +F  M + N+V+WT ++SGY R + + +  ++F  M  EG  P+   F++
Sbjct: 169 HSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFAS 228

Query: 185 VLGV---LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD-ARAVFDGM 240
           VL     L D G++     +  +V+K G E    +  +++++Y +     D A   FDGM
Sbjct: 229 VLSAVTGLQDLGVLEV---LRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGM 285

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            +R+  TW++M+A  +++   ++A           +  +++  ++ +  C    E   AR
Sbjct: 286 VERNEYTWSTMIAA-LSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITE---AR 341

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            L  Q+  + I    N    ++  Y + G +++A ++F  M   ++ +SW  MI+G+ QN
Sbjct: 342 ILFEQI-PDPIVVSWN---AMITGYMQNGMVDEAKELFDRM-PFRNTISWAGMIAGYAQN 396

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG 416
           G  + A++    + R G+ P+  + +    A   +       QVH+  +K   + +  V 
Sbjct: 397 GRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVC 456

Query: 417 TALLNAY-------------------------------VKKGILDEAAKVFELIDEKDIV 445
            AL++ Y                               V+  +L++A  +F+ +  +D+V
Sbjct: 457 NALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVV 516

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+ +++ YAQ    + AV+ ++ +  E  KPN    + +++ C    +A + G+Q H  
Sbjct: 517 SWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSA-KLGQQIHTV 575

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           +IK  +++ L V++AL++MY K G  +S  +VF    +RD+ +WN+ I G AQHG  ++A
Sbjct: 576 AIKHGMDSELIVANALMSMYFKCGCADS-HKVFDSMEERDIFTWNTFITGCAQHGLGREA 634

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           +++++ M    +  + +TF+G++ AC+HAGLVDEG Q+F  M  ++ + P +EHY+CMVD
Sbjct: 635 IKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVD 694

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           L  R G ++ A   I  MP      +W  +L AC+              L + +P ++  
Sbjct: 695 LLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGN 754

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YV+LSN+Y++ G W E A +RK+M  R V KE G SW++++NK +SF+ GD  H +  +I
Sbjct: 755 YVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEI 814

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
              L++L T L+  GY PDT +VL DID+E KE+ L  HSE+LA+A+GL+ TP G P+QI
Sbjct: 815 DYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQI 874

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLR+CGDCHT IK +S + +RDI +RD NRFHHF+ G CSCGD+W
Sbjct: 875 MKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/530 (27%), Positives = 259/530 (48%), Gaps = 42/530 (7%)

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
           A D +  ++ +    R   + + R VFD M   ++++W S++S Y  + M +    LF  
Sbjct: 30  ALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDA 89

Query: 170 MQVEGIKPNSFTFSTV--LGVLADEGIV------ATAVQVHTMV---IKNG--------- 209
           +    ++  +   S    LG + D   V         V  + MV   ++NG         
Sbjct: 90  ISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLF 149

Query: 210 ----GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
                  VTS  N++++ Y  S+ + DA  +F  M  R+ +TW  M++GYV  E H + +
Sbjct: 150 DAMPSRDVTS-WNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGW 208

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           + F  M   GA   +S F SV+      ++L +   L   VLK G + D  I T ++  Y
Sbjct: 209 DIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVY 268

Query: 326 SK-CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           ++    ++ A K F  M E ++  +W+ MI+     G ID A+  +    R+ V+    +
Sbjct: 269 TRDASALDIAIKFFDGMVE-RNEYTWSTMIAALSHGGRIDAAIAVY---GRDPVKSIP-S 323

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG-TALLNAYVKKGILDEAAKVFELIDEKD 443
            + +LT           A I+         V   A++  Y++ G++DEA ++F+ +  ++
Sbjct: 324 QTALLTGLARCGRI-TEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRN 382

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            ++W+ M+AGYAQ G +E A+ + + L   G+ P+  + +S   AC+    A+E G+Q H
Sbjct: 383 TISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSH-IGALETGRQVH 441

Query: 504 ACSIKA--KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
           + ++KA  + N+ +C  +AL++MY K  N+E   +VF R R +D VSWNS I    Q+  
Sbjct: 442 SLAVKAGCQFNSYVC--NALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNM 499

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
            + A  +F  M  +D+    +++  +I+A   A   DE  ++F  M++EH
Sbjct: 500 LEDARHIFDNMLSRDV----VSWTTIISAYAQAERGDEAVEFFKTMLHEH 545



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 217/466 (46%), Gaps = 58/466 (12%)

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV----- 284
           +R+AR VFD M  RD I WNSM++ Y  + +  +A   F+   ++G  +  +T +     
Sbjct: 49  LREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFD--AISGGNVRTATILLSGYA 106

Query: 285 ------------------------SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
                                   +++       ++ +AR+L   +    +   +++ TG
Sbjct: 107 RLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTG 166

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
               Y    +M DA  +F  M + +++V+WT MISG+++        + F  M  EG  P
Sbjct: 167 ----YCHSRQMVDAWNLFKQMPQ-RNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASP 221

Query: 381 NGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKG-ILDEAAKV 435
           +   ++ +L+A   +    V       ++KT +E    +GT++LN Y +    LD A K 
Sbjct: 222 DQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKF 281

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + E++   WS M+A  +  G  + A+ +Y +   + + P++    + +  C      
Sbjct: 282 FDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARC------ 334

Query: 496 VEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
              G+   A  +  ++ + + VS +A++T Y + G ++ A E+F R   R+ +SW  MI 
Sbjct: 335 ---GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIA 391

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GYAQ+G +++AL++ + + R  +     +      AC+H G ++ G+Q   + V     +
Sbjct: 392 GYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQF 451

Query: 615 PTMEHYSC--MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            +   Y C  ++ +Y +   +E    + NRM    + + W + +AA
Sbjct: 452 NS---YVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS-WNSFIAA 493



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 18/200 (9%)

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           S  +A +    + G L EA +VF+ +  +DI+AW++M++ Y   G  E A  ++  ++  
Sbjct: 34  SAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGG 93

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIE 532
            V+           A    S     G+   A  +   +     V+ +A+V+ Y + G+I 
Sbjct: 94  NVR----------TATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDIT 143

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            A  +F     RD+ SWNSM+ GY        A  +FK+M +++L    +T+  +I+   
Sbjct: 144 MARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNL----VTWTVMISGYV 199

Query: 593 HAGLVDEGQQYFDIMVNEHH 612
               +++  + +DI    HH
Sbjct: 200 R---IEQHGKGWDIFRMMHH 216


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/751 (34%), Positives = 412/751 (54%), Gaps = 39/751 (5%)

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV--LELFHRMQVEGIKPNSF 180
           ++ + ++     +FD +   +V ++  L+  Y+ +        L L+ RM    + PN++
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TF   L   +          +H   I  G +    V  AL+ MY+K   + DA  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL--TRSTFVSVIKLCATTKELRL 298
             RD + WN+M+AGY  + ++  A     +M +    L    ST V+++ L A    L  
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 299 ARQLHSQVLKNGIDFDHN----------IRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
              +H+  ++  +  + N          + T L+  Y+KCG +  A ++F  M   ++ V
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM-PARNEV 305

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVH 401
           +W+A+I G +    +  A   F  M  +G+     + + I +A  A +         Q+H
Sbjct: 306 TWSALIGGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLRMGEQLH 363

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           A + K+      + G +LL+ Y K G++D+A  +F+ +  KD V++SA+++GY Q G  E
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A  +++++ +  V+P+  T  S+I AC+   AA++ G+  H   I   L +   + +AL
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSH-LAALQHGRCSHGSVIIRGLASETSICNAL 482

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + MY+K G I+ + +VF     RD+VSWN+MI GY  HG  K+A  +F EM       DG
Sbjct: 483 IDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDG 542

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +TFI +++AC+H+GLV EG+ +F +M + + + P MEHY CMVDL SR G L++A + I 
Sbjct: 543 VTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQ 602

Query: 642 RMPFAASATVWRTVLAACRLI--------------SLQPHDSAIYVLLSNMYAATGHWQE 687
            MP  A   VW  +L ACR+                L P  +  +VLLSN+Y+A G + E
Sbjct: 603 SMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDE 662

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
            A VR +   +  KK  G SWIE+    ++F+ GD SHPQS +IY +L+ +   +K  GY
Sbjct: 663 AAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGY 722

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
           +PDTS+VLQD+++E KE  L  HSE+LAIA+G+++      + + KNLRVCGDCHTVIK 
Sbjct: 723 QPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKH 782

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           IS ++RR I+VRD NRFHHFK G CSCGD+W
Sbjct: 783 ISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 170/633 (26%), Positives = 307/633 (48%), Gaps = 50/633 (7%)

Query: 11  INPQTKQPPKSLR--------------SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRD 56
           ++P   QPP++                +  +  +   LFD+ P  +   YN L+  Y   
Sbjct: 42  LHPPPLQPPRASASASASLLLQLQDHIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSS 101

Query: 57  SLHQEA--LNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
           S    A  L+L+  + R  +     T    LK C  L DH  GR +H   + +G   D+ 
Sbjct: 102 SPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLF 161

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE--LFHRMQV 172
           VST+L+D+Y++   + D   +F  M   ++V+W ++L+GYA + M    +   L  +MQ+
Sbjct: 162 VSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQM 221

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI-------KNGGEVVTS---VCNALIS 222
             ++PN+ T   +L +LA +G +A    VH   I       +N    +T    +  AL+ 
Sbjct: 222 HRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLD 281

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG-AELTRS 281
           MY K   +  AR VFD M  R+ +TW++++ G+V      +AF  F  M   G   L+ +
Sbjct: 282 MYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT 341

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           +  S ++ CA+   LR+  QLH+ + K+G+  D      L+  Y+K G ++ A  +F  M
Sbjct: 342 SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 401

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-- 399
             +KD VS++A++SG++QNG  + A   F +M    V P+  T   ++ A   ++  Q  
Sbjct: 402 -AVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHG 460

Query: 400 --VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
              H  +I        S+  AL++ Y K G +D + +VF ++  +DIV+W+ M+AGY   
Sbjct: 461 RCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIH 520

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC----SIKAKLNN 513
           G  + A  ++ ++ + G  P+  TF  +++AC+     +E    FH       +  ++ +
Sbjct: 521 GLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEH 580

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +C    +V + S+ G ++ A E  +    R D+  W +++ G  +     K +++ K++
Sbjct: 581 YIC----MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL-GACR---VYKNIDLGKKV 632

Query: 573 RR--QDLEFDGI-TFIGVITACTHAGLVDEGQQ 602
            R  Q+L  +G   F+ +    + AG  DE  +
Sbjct: 633 SRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAE 665


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/626 (38%), Positives = 380/626 (60%), Gaps = 22/626 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT-RSTFVSVIKLCA 291
           A +VF    + D +TWNSM+  +V + +   A +++  M      +  R TF S++K CA
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
              E ++ + LH QV+K  +  D  I T L+  Y+ CG ++ A  +F  M     VV WT
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV-WT 149

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKT 407
           +MISG+++N   + A+  + +M  +G  P+  T + +++A   +    V    H+HI + 
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
           + +    +G+AL+N Y K G L  A +VF+ + +KD+ AWSA++ GY +   +  A++++
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLF 269

Query: 468 RQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           R++     ++PNE T  +VI+AC A    +E G+  H    + +  +++ ++++L+ M+S
Sbjct: 270 REVAGGSNMRPNEVTILAVISAC-AQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G+I++A  +F     +DL+SWNSM+ G+A HG  ++AL  F+ M+  DL+ D ITFIG
Sbjct: 329 KCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIG 388

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V+TAC+HAGLV EG++ F  +   + +    EHY CMVDL  RAG+L +A + I  MP  
Sbjct: 389 VLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ 448

Query: 647 ASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
               +W ++L ACR              L+ L+P +  +Y+LLSN+YA    W E  +VR
Sbjct: 449 PDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVR 508

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           +LMN++ ++K  G S + + N  +SFLAGD SHP+  +I   L ++  +LK AGY  DTS
Sbjct: 509 ELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTS 568

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
            VL +IDD  KE  +SQHSE+LA+ +GL+ +  G  + I+KNLRVC DCHT+IKL+SK+ 
Sbjct: 569 EVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIY 628

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +R I +RD NRFHHFK+G CSC DYW
Sbjct: 629 QRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 220/454 (48%), Gaps = 35/454 (7%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI--RRLGLPLFGSTLSSVLKTCGC 90
           S+F  + + + + +N +L  +   ++ + AL  +  +  R   +P    T  S+LK C  
Sbjct: 33  SVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVP-DRFTFPSLLKGCAL 91

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L +   G+ +H + VK     D+ + T+L+++Y    +++  R +F+ M   N V WTS+
Sbjct: 92  LLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSM 151

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +SGY +N   +  L L+ +M+ +G  P+  T +T++   A+   +   +++H+ + +   
Sbjct: 152 ISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           ++   + +AL++MY K   ++ AR VFD + D+D   W++++ GYV N    EA + F  
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFRE 271

Query: 271 M-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           + G +       T ++VI  CA   +L   R +H  + +       ++   L+  +SKCG
Sbjct: 272 VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCG 331

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++ A +IF  M   KD++SW +M++G   +G    A+  F  M    ++P+  T+  +L
Sbjct: 332 DIDAAKRIFDSM-SYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390

Query: 390 TAQPAVSPFQVHAHII----KTNYEKSFSVGTAL--------LNAYVKKGILDEAAKVFE 437
           TA         HA ++    K  YE     G  L        ++   + G+L EA +   
Sbjct: 391 TACS-------HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIR 443

Query: 438 LID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           ++  + D   W +ML          GA ++Y  L
Sbjct: 444 VMPLQPDGAIWGSML----------GACRVYNNL 467



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 187/420 (44%), Gaps = 38/420 (9%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LF+R   RN V +  ++  Y ++    EAL L+  +   G      T+++++  C
Sbjct: 131 KSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L D   G ++H    +        + ++LV++Y +  +++  R+VFD +++ +V +W+
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWS 250

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEG---IKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +L+ GY +N  +   L+LF   +V G   ++PN  T   V+   A  G + T   VH  +
Sbjct: 251 ALIFGYVKNNRSTEALQLFR--EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYI 308

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
            +       S+ N+LI M+ K   +  A+ +FD M  +D I+WNSMV G+  + L  EA 
Sbjct: 309 TRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREAL 368

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVA 324
             F  M     +    TF+ V+  C+    ++  ++L  ++    G+         ++  
Sbjct: 369 AQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDL 428

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
             + G + +A +   +M    D   W +M+      GA  +  N   ++  E  R     
Sbjct: 429 LCRAGLLAEAREFIRVMPLQPDGAIWGSML------GACRVYNNL--ELGEEAAR----- 475

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
              +L  +P                  +  V   L N Y K+ + +E  KV EL++EK I
Sbjct: 476 --FLLKLEPT-----------------NDGVYILLSNIYAKRKMWNEVKKVRELMNEKGI 516


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/643 (37%), Positives = 376/643 (58%), Gaps = 27/643 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGA 276
           N+LI++Y K   +  AR +FDGM  R+ ++W +++AGY  N L +E    F  M  +   
Sbjct: 66  NSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYM 125

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                 F ++I  C+ + ++    Q H   LK+G+ F   ++  L+  YS+   ++ A  
Sbjct: 126 RPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMS 185

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           ++  +  + DV S+  +I+G L+NG    A+    +M  E +  +  TY   +TA    S
Sbjct: 186 VWYEVPGL-DVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTY---VTAFGLCS 241

Query: 397 -------PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
                    QVH  + +T  E    V +A+++ Y K G +  A KVF  +  K++V+W+A
Sbjct: 242 HLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTA 301

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +LA Y+Q G  E A+  + ++  +G+ PNE+TF+ ++N+C   SA +  GK  H    K+
Sbjct: 302 ILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISA-LGHGKLLHTRIKKS 360

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              + + V +AL+ MYSK G+IE+A +VF     RD ++W++MICG + HG  ++AL VF
Sbjct: 361 GFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVF 420

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           +EM         +TF+GV++AC H G V EG  Y + ++ +  I P +EHY+C+V L  +
Sbjct: 421 QEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCK 480

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLL 675
           AG L++A + +   P       WRT+L+AC +              + + P D   Y+LL
Sbjct: 481 AGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILL 540

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SNMYA    W    ++RKLM +R VKKE G SWIE++N  + F++   +HP+SNQIY K+
Sbjct: 541 SNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKV 600

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           +EL T ++  GY PD + V  D++DE K   +S HSE+LAIA+GL+ TP+GAP++++KNL
Sbjct: 601 QELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNL 660

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+C DCH+ +KLISK+  R I+VRD NRFH F +G CSC DYW
Sbjct: 661 RMCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 263/498 (52%), Gaps = 22/498 (4%)

Query: 96  FGRQVHCECVKSGFARDVNVS--TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           FG+ +H   + +  A   N+    SL++LY + + +   R +FD M + NVVSW +L++G
Sbjct: 43  FGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAG 102

Query: 154 YARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           Y  N +   VL LF  M  V+ ++PN + F+T++   +D G V    Q H   +K+G   
Sbjct: 103 YFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVF 162

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V NALI MY +   V+ A +V+  +   D  ++N ++ G + N    EA E  + M 
Sbjct: 163 HQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMV 222

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                    T+V+   LC+  K+LRL  Q+H ++ + G ++D  + + ++  Y KCG + 
Sbjct: 223 DECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNIL 282

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A K+F+ + + K+VVSWTA+++ + QNG  + A+NFF +M  +G+ PN +T++++L + 
Sbjct: 283 NARKVFNRL-QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSC 341

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +S       +H  I K+ +E    VG AL+N Y K G ++ A KVF  +  +D + WS
Sbjct: 342 AGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWS 401

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-----KQFH 503
           AM+ G +  G    A+ +++++ +    P+  TF  V++AC A   +V++G     +   
Sbjct: 402 AMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSAC-AHLGSVQEGFYYLNQLMK 460

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICG---YAQH 559
              I+  + +  C+    V +  K G ++ A    K    K D+V+W +++     +  +
Sbjct: 461 QTGIEPGVEHYTCI----VGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNY 516

Query: 560 GHTKKALEVFKEMRRQDL 577
           G  KK  E+  +M   D+
Sbjct: 517 GLGKKVAELVLQMDPGDV 534



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 207/445 (46%), Gaps = 23/445 (5%)

Query: 26  FYSKKDQS-----LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-----LGIRRLGLP 75
            Y+K DQ      LFD   +RN V +  L+  Y  + L  E L LF     +   R    
Sbjct: 71  LYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEY 130

Query: 76  LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV 135
           +F + +SS    C      V G Q H   +KSG      V  +L+ +Y R ++V+    V
Sbjct: 131 IFATIISS----CSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSV 186

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           + ++   +V S+  +++G   N      LE+  RM  E I  ++ T+ T  G+ +    +
Sbjct: 187 WYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDL 246

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
              +QVH  + + G E  + V +A+I MY K   + +AR VF+ ++ ++ ++W +++A Y
Sbjct: 247 RLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAY 306

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
             N    EA   F  M + G      TF  ++  CA    L   + LH+++ K+G + DH
Sbjct: 307 SQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFE-DH 365

Query: 316 NI-RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
            I    L+  YSK G +E A K+F  M   +D ++W+AMI G   +G    A+  F +M 
Sbjct: 366 IIVGNALINMYSKSGSIEAAHKVFLEMI-CRDSITWSAMICGLSHHGLGREALVVFQEML 424

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
                P+  T+  +L+A   +   Q     ++  + +T  E      T ++    K G L
Sbjct: 425 AAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRL 484

Query: 430 DEAAKVFELIDEK-DIVAWSAMLAG 453
           DEA    +    K D+VAW  +L+ 
Sbjct: 485 DEAENFMKSTPVKWDVVAWRTLLSA 509


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/614 (38%), Positives = 359/614 (58%), Gaps = 40/614 (6%)

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A  T+  M     E+      SV+K C+     R+ +++H   +KNG+  D  +   LM 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 324 AYSKCGKMEDASKIFSMMRE---------------------MKDVVSWTAMISGHLQNGA 362
            YS+CG +  A  +F  M E                      + +VSWTAMI+G+++   
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTA 418
           ++     F +M  E V PN  T   ++ +   V   Q+    HA+I++  +  S ++ TA
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           L++ Y K G +  A  +F+ +  KD++ W+AM++ YAQ    + A +++ Q+   GV+PN
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           E T  S+++ C A + A++ GK FHA   K  +   + + +AL+ MY+K G+I  A  +F
Sbjct: 333 ELTMVSLLSLC-AVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
                RD+ +WN M+ GY  HG+ +KAL++F EM    ++ + ITFIG + AC+HAGLV 
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVV 451

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           EG+  F+ M+++  + P +EHY CMVDL  RAG+L++A  +I  MP   +  +W  +LAA
Sbjct: 452 EGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511

Query: 659 CR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           C+              L++L+P +    VL+SN+YAA   W + A +RK + D  +KKE 
Sbjct: 512 CKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEP 571

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           G S IEV    + F  GD +HP   +I   L E+S +LK+AGY PDTS VL +ID+E KE
Sbjct: 572 GMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKE 631

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
             L+ HSE+LA+AFGL++T  G P+++VKNLR+C DCHTV KL+SK+ +R I+VRD NRF
Sbjct: 632 TALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRF 691

Query: 825 HHFKEGLCSCGDYW 838
           HHF+EG CSCG YW
Sbjct: 692 HHFREGSCSCGGYW 705



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 234/488 (47%), Gaps = 51/488 (10%)

Query: 8   KSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCR-------DSLHQ 60
           K+  NP  +   K  + P ++  +    D++ Q +     R  F + +       +S  +
Sbjct: 33  KTPQNPSPQHQNKHQKHPSFTPNNHLCLDQTQQLH-AHITRTHFNHAQQVSFSPFESHPR 91

Query: 61  EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLV 120
            ALN +  +R+L + +    + SVLK C  +     G+++H   VK+G   DV V  +L+
Sbjct: 92  YALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALM 151

Query: 121 DLYMRTNNVEDGRRVFDDMNESNV----------------------VSWTSLLSGYARNK 158
            +Y    ++   R +FD M+E +V                      VSWT++++GY R  
Sbjct: 152 QMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCN 211

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
             +    LF RM  E + PN  T  +++      G V    ++H  +++NG  +  ++  
Sbjct: 212 DLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALAT 271

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL+ MY K   +R ARA+FD M+++D +TW +M++ Y        AF+ F  M   G   
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              T VS++ LCA    L + +  H+ + K G++ D  ++T L+  Y+KCG +  A ++F
Sbjct: 332 NELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           S   + +D+ +W  M++G+  +G  + A+  F +M   GV+PN  T+   + A  A S  
Sbjct: 392 SEAID-RDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITF---IGALHACS-- 445

Query: 399 QVHAHII---KTNYEK---SFSVGT------ALLNAYVKKGILDEAAKVFELID-EKDIV 445
             HA ++   K  +EK    F +         +++   + G+LDEA K+ E +    +I 
Sbjct: 446 --HAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIA 503

Query: 446 AWSAMLAG 453
            W AMLA 
Sbjct: 504 IWGAMLAA 511


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/578 (38%), Positives = 361/578 (62%), Gaps = 21/578 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + S+++ C  +K L   +QLH+Q    GI ++ ++ T L+  Y+    + +A  +F
Sbjct: 46  THYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLF 105

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             + + +++  W  +I G+  NG  D A+  + +M   G+RP+ FT   +L A  A+S  
Sbjct: 106 DKIPK-QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAI 164

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
                +H ++IK+ +E+   VG AL++ Y K G + +A +VF+ I  +D V W++MLA Y
Sbjct: 165 GEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAY 224

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           AQ G  + ++ + R++ + GV+P E T  +VI++ +A  A +  G++ H    +    + 
Sbjct: 225 AQNGHPDESISLCREMAANGVRPTEATLVTVISS-SADVACLPYGREIHGFGWRHGFQSN 283

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V +AL+ MY+K G+++ A  +F+R R++ +VSWN++I GYA HG    AL++F +MR+
Sbjct: 284 DKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRK 343

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           +D   D ITF+GV+ AC+   L+DEG+  +++MV ++ I PT++HY+CM+DL    G L+
Sbjct: 344 EDRP-DHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLD 402

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A D+I  M     + VW  +L +C+              LI L+P DS  YV+L+NMYA
Sbjct: 403 EAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYA 462

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
            +G W+   ++R++M D+++KK    SWIEVKNK Y+FLAGD+SH  S+ IY++L+ L  
Sbjct: 463 QSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEG 522

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
            + +AGY PDT  V  D++++ K +++  HSERLAIAFGL++T  G  L I KNLR+C D
Sbjct: 523 LMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICED 582

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH  IK ISK+  R+I VRD NR+H FK G+CSCGD+W
Sbjct: 583 CHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 193/394 (48%), Gaps = 33/394 (8%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H +    G A + +++T LV LY  +N++ + R +FD + + N+  W  L+ GYA 
Sbjct: 66  GKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAW 125

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N  +D  + L+H+M   G++P++FT   VL   +    +     +H  VIK+G E    V
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             ALI MY K   V DA  VFD +  RD++ WNSM+A Y  N    E+      M   G 
Sbjct: 186 GAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGV 245

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
             T +T V+VI   A    L   R++H    ++G   +  ++T L+  Y+KCG ++ A  
Sbjct: 246 RPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALA 305

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  +RE K VVSW A+I+G+  +G    A++ F +M +E  RP+  T+  +L A     
Sbjct: 306 LFERLRE-KRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAA----- 358

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKK-GILDEAAKVFELIDEKDIVAWSAMLAGYA 455
                      +  +    G AL N  V+  GI         +ID          L G+ 
Sbjct: 359 ----------CSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMID----------LLGHC 398

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             G  + A  + R ++   VKP+   + +++N+C
Sbjct: 399 --GQLDEAYDLIRNMS---VKPDSGVWGALLNSC 427



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 182/384 (47%), Gaps = 25/384 (6%)

Query: 7   LKSLINPQTKQPPKSLRSPFYS-----KKD------------------QSLFDRSPQRNF 43
           L+S I+ +   P K L + FY       +D                  ++LFD+ P++N 
Sbjct: 54  LQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNL 113

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
             +N L+  Y  +  H  A+ L+  +   GL     TL  VLK C  L     GR +H  
Sbjct: 114 FLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEY 173

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
            +KSG+ RD+ V  +L+D+Y +   V D  RVFD +   + V W S+L+ YA+N   D  
Sbjct: 174 VIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDES 233

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           + L   M   G++P   T  TV+   AD   +    ++H    ++G +    V  ALI M
Sbjct: 234 ISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDM 293

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K   V+ A A+F+ + ++  ++WN+++ GY  + L + A + F+ M          TF
Sbjct: 294 YAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRP-DHITF 352

Query: 284 VSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           V V+  C+  + L   R L++ ++++ GI       T ++     CG++++A  +   M 
Sbjct: 353 VGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMS 412

Query: 343 EMKDVVSWTAMISGHLQNGAIDLA 366
              D   W A+++    +G ++LA
Sbjct: 413 VKPDSGVWGALLNSCKIHGNVELA 436



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 196/406 (48%), Gaps = 12/406 (2%)

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           + ++++L    D   +    Q+H      G      +   L+ +Y  S  + +AR +FD 
Sbjct: 48  YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           +  ++   WN ++ GY  N  H  A   ++ M   G      T   V+K C+    +   
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           R +H  V+K+G + D  +   L+  Y+KCG + DA ++F  +  ++D V W +M++ + Q
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKI-VVRDAVLWNSMLAAYAQ 226

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS--PF--QVHAHIIKTNYEKSFSV 415
           NG  D +++   +M   GVRP   T   ++++   V+  P+  ++H    +  ++ +  V
Sbjct: 227 NGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKV 286

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
            TAL++ Y K G +  A  +FE + EK +V+W+A++ GYA  G   GA+ ++ ++  E  
Sbjct: 287 KTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED- 345

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSALVTMYSKKGNIESA 534
           +P+  TF  V+ AC+     +++G+  +   ++   +   +   + ++ +    G ++ A
Sbjct: 346 RPDHITFVGVLAACSR-GRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEA 404

Query: 535 SEVFKRQR-KRDLVSWNSMICGYAQHGHT---KKALEVFKEMRRQD 576
            ++ +    K D   W +++     HG+    + ALE   E+   D
Sbjct: 405 YDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDD 450


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/661 (36%), Positives = 383/661 (57%), Gaps = 57/661 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VF+ +++ + + WN+M+ G+ ++   + A E +  M   G      +F  ++K CA 
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF--SMMREM------ 344
           +K     RQ+H+QVLK G   D  + T L+  Y++ G +EDA K+F  S  R++      
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 345 ----------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                                 +DVVSW AMI+G+++NG  + A+  F +M R  VRP+ 
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKT----NYEKSFSVGTALLNAYVKKGILDEAAK 434
            T   +++A           QVH+ +        +  S  +  AL++ Y K G ++ A  
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +FE +  KD+V+W+ ++ GY      + A+ +++++   G  PN+ T  SV+ AC A   
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPAC-AHLG 315

Query: 495 AVEQGKQFHACSIKAKL---NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
           A++ G+  H   I  KL    N   + ++L+ MY+K G+IE+A +VF     R L SWN+
Sbjct: 316 AIDIGRWIHV-YIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNA 374

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           MI G+A HG    A ++F  MR   +E D ITF+G+++AC+H+GL+D G+Q F  M  ++
Sbjct: 375 MIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDY 434

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----------- 660
           ++ P +EHY CM+DL   +G+ ++A ++I+ MP      +W ++L AC+           
Sbjct: 435 NLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESF 494

Query: 661 ---LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS 717
              LI ++P +S  YVLLSN+YA  G W++ ARVR ++N + +KK  G S IEV +  + 
Sbjct: 495 AQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHE 554

Query: 718 FLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIA 777
           F+ GD  HP+  +IY  LEE+  +L++AG+ PDTS VLQ++++E KE  L  HSE+LAIA
Sbjct: 555 FIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIA 614

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           FGL++T  G  L IVKNLRVC +CH   KLISK+ +R+IV RD  RFHHF++G+CSC DY
Sbjct: 615 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDY 674

Query: 838 W 838
           W
Sbjct: 675 W 675



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 216/481 (44%), Gaps = 44/481 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N +L  +   S    AL +++ +  LG      +   +LK+C    
Sbjct: 19  SVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSK 78

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               GRQ+H + +K G   D  V TSL+ +Y R   +ED R+VFD  +  +VVS T+L++
Sbjct: 79  AFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALIT 138

Query: 153 GYA-------------------------------RNKMNDRVLELFHRMQVEGIKPNSFT 181
           GYA                                N   +  LELF  M    ++P+  T
Sbjct: 139 GYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGT 198

Query: 182 FSTVLGVLADEGIVATAVQVHTMV----IKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
             +V+   A  G +    QVH+ V      +G      + NALI +Y K   V  A  +F
Sbjct: 199 LVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLF 258

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           +G+  +D ++WN+++ GY    L+ EA   F  M  +G      T +SV+  CA    + 
Sbjct: 259 EGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAID 318

Query: 298 LARQLHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           + R +H  + K   G+  + ++RT L+  Y+KCG +E A ++F+ M   + + SW AMI 
Sbjct: 319 IGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSML-YRSLSSWNAMIF 377

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT-----NYE 410
           G   +G  + A + F +M    V P+  T+  +L+A        +   I K+     N  
Sbjct: 378 GFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLT 437

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                   +++     G+  EA ++   +  E D V W ++L    + G+ E A    ++
Sbjct: 438 PKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQK 497

Query: 470 L 470
           L
Sbjct: 498 L 498



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 165/359 (45%), Gaps = 19/359 (5%)

Query: 23  RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS 82
           R  F S +   +FD   +R+ V +N ++  Y  +  ++EAL LF  + R  +     TL 
Sbjct: 143 RGDFRSAR--KVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLV 200

Query: 83  SVLKTCGCLFDHVFGRQVHC----ECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           SV+  C        GRQVH     +    GF+  + +  +L+DLY +  +VE    +F+ 
Sbjct: 201 SVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEG 260

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           ++  +VVSW +L+ GY    +    L LF  M   G  PN  T  +VL   A  G +   
Sbjct: 261 LSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIG 320

Query: 199 VQVHTMVIKNGGEVV--TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
             +H  + K    V   TS+  +LI MY K   +  A  VF+ M  R   +WN+M+ G+ 
Sbjct: 321 RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFA 380

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
            +     AF+ F+ M     E    TFV ++  C+ +  L L RQ+   + +     D+N
Sbjct: 381 MHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ-----DYN 435

Query: 317 IRT-----GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           +       G M+      G  ++A ++   M    D V W +++    ++G ++LA +F
Sbjct: 436 LTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESF 494



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 137/264 (51%), Gaps = 36/264 (13%)

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           L  A  VFE I E +++ W+ ML G+A   D   A+++Y ++ S G  PN ++F  ++ +
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 489 CTAPSAAVEQGKQFHA------CSIKAKLNNAL-------------------------CV 517
           C A S A E+G+Q HA      C +   ++ +L                           
Sbjct: 74  C-AKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            +AL+T Y+ +G+  SA +VF    +RD+VSWN+MI GY ++G  ++ALE+FKEM R ++
Sbjct: 133 CTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNV 192

Query: 578 EFDGITFIGVITACTHAGLVDEGQQ---YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             D  T + V++AC  +G ++ G+Q   + D   ++H    +++  + ++DLYS+ G +E
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252

Query: 635 KAMDIINRMPFAASATVWRTVLAA 658
            A  +   +        W T++  
Sbjct: 253 TAFGLFEGLS-CKDVVSWNTLIGG 275


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/753 (32%), Positives = 430/753 (57%), Gaps = 27/753 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +  F   P+R+ V +N ++  + ++   ++++++FL + R G+    ++L+ VLK CG L
Sbjct: 135 RKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGAL 194

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G QVH   VK GF  DV   ++L+ +Y +   ++D   VF ++ E N VSW++++
Sbjct: 195 EECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMI 254

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN--G 209
           +G  +N  N   LELF  MQ  G+  +   ++++    A    +    ++H+  +K+  G
Sbjct: 255 AGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFG 314

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +++  V  A + MY K   + DA+ V   M      ++N+++ GY  ++   +A ++F 
Sbjct: 315 SDII--VGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQ 372

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G      T    +  CA+ +     RQ+H   +K+    +  +   ++  Y KC 
Sbjct: 373 LLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCK 432

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            + +AS +F MM E +D VSW A+I+   QNG  +  +  F  M    + P+ FTY  +L
Sbjct: 433 ALAEASDLFDMM-ERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVL 491

Query: 390 TA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A    Q   +  ++H  IIK+       VG AL++ Y K G++++A K+ +  ++K +V
Sbjct: 492 KACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMV 551

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+A+++G++ +  +E A K + ++   GV P+ FT+++V++ C A  A V  GKQ HA 
Sbjct: 552 SWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTC-ANLATVGLGKQIHAQ 610

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            IK +L + + + S LV MYSK GN++ +  +F++   RD V+WN+M+CGYA HG  ++A
Sbjct: 611 IIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEA 670

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L++F+ M+  +++ +  TF+ V+ AC H GLVD+G  YFD+M++E+ + P  EHYSCMVD
Sbjct: 671 LKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVD 730

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           +  R+G +++A++++ +MPF A A +WR +L+ C+              L+ L P DS+ 
Sbjct: 731 ILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSA 790

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
            VLLSN+YA  G W   + +RK+M   K+KKE G SWIE+K++ ++FL GD  HP+  +I
Sbjct: 791 CVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEI 850

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           Y KL  L   ++  GY PD   +L   D+E +E
Sbjct: 851 YEKLGVLIGEMQSVGYIPDCDVLL---DEEVEE 880



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 284/547 (51%), Gaps = 7/547 (1%)

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
           C+     + RDV    S++  Y     ++  R+ F +M E +VVSW S++SG+ +N    
Sbjct: 104 CKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECR 163

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
           + +++F  M   G+  +  + + VL            VQVH +V+K G +      +AL+
Sbjct: 164 KSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALL 223

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
            MY K K + D+ +VF  + +++ ++W++M+AG V N+ ++E  E F  M   G  +++S
Sbjct: 224 GMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQS 283

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
            + S+ + CA    LRL ++LHS  LK+    D  + T  +  Y+KCG+M DA K+ S M
Sbjct: 284 IYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSM 343

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SP 397
            +   + S+ A+I G+ ++     A+  F  + + G+  +  T S  L A  ++      
Sbjct: 344 PKCS-LQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEG 402

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            QVH   +K+    +  V  A+L+ Y K   L EA+ +F++++ +D V+W+A++A   Q 
Sbjct: 403 RQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQN 462

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G+ E  +  +  +    ++P++FT+ SV+ AC A   A+  G + H   IK+ +     V
Sbjct: 463 GNEEETLAHFASMIHSRMEPDDFTYGSVLKAC-AGRQALNTGMEIHTRIIKSGMGFDSFV 521

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            +ALV MY K G IE A ++  R  ++ +VSWN++I G++    ++ A + F  M    +
Sbjct: 522 GAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGV 581

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
             D  T+  V+  C +   V  G+Q    ++ +  +   +   S +VD+YS+ G ++ + 
Sbjct: 582 NPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ-ELQSDVYICSTLVDMYSKCGNMQDSQ 640

Query: 638 DIINRMP 644
            +  + P
Sbjct: 641 LMFEKAP 647



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 257/517 (49%), Gaps = 39/517 (7%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK-----------SKM 229
           TFS +    + +  +    Q H  +I  G E  T V N L+ MY+K            KM
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 230 -VRD-------------------ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +RD                   AR  F  M +RD ++WNS+++G++ N    ++ + F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            MG  G    R++   V+K C   +E  +  Q+H  V+K G D D    + L+  Y+KC 
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +++D+  +FS + E K+ VSW+AMI+G +QN      +  F +M   GV  +   Y+ + 
Sbjct: 231 RLDDSLSVFSELPE-KNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            +  A+S      ++H+H +K+ +     VGTA L+ Y K G + +A KV   + +  + 
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +++A++ GYA+      A+K ++ L   G+  +E T S  +NAC +    +E G+Q H  
Sbjct: 350 SYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE-GRQVHGL 408

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           ++K+   + +CV++A++ MY K   +  AS++F    +RD VSWN++I    Q+G+ ++ 
Sbjct: 409 AVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEET 468

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L  F  M    +E D  T+  V+ AC     ++ G +    ++     + +    + +VD
Sbjct: 469 LAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG-AALVD 527

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLI 662
           +Y + GM+EKA  I +R     +   W  +++   L+
Sbjct: 528 MYCKCGMIEKADKIHDRTE-QKTMVSWNAIISGFSLL 563



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 117/227 (51%), Gaps = 2/227 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K   + DR+ Q+  V +N ++  +      ++A   F  +  +G+     T ++VL TC
Sbjct: 536 EKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTC 595

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G+Q+H + +K     DV + ++LVD+Y +  N++D + +F+     + V+W 
Sbjct: 596 ANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWN 655

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           ++L GYA + + +  L+LF  MQ+  +KPN  TF +VL   A  G+V   +     M+ +
Sbjct: 656 AMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSE 715

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
            G +  +   + ++ +  +S  + +A  +   M  + D++ W ++++
Sbjct: 716 YGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLS 762


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/581 (39%), Positives = 364/581 (62%), Gaps = 24/581 (4%)

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  R+ +  ++  C   ++L+  R +H+ +  +  + D  +   ++  Y+KCG +E+A  
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M   KD+VSWT +ISG+ Q+G    A+  F +M   G +PN FT S +L A     
Sbjct: 162 LFDKM-PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKAS-GTG 219

Query: 397 PF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           P      Q+HA  +K  Y+ +  VG++LL+ Y +   + EA  +F  +  K++V+W+A++
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           AG+A+ G+ E  ++++ Q+  +G +P  FT+SSV+ AC A S ++EQGK  HA  IK+  
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-AC-ASSGSLEQGKWVHAHVIKSGG 337

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                + + L+ MY+K G+I+ A +VF+R  K+D+VSWNS+I GYAQHG   +AL++F++
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 397

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M +  ++ + ITF+ V+TAC+H+GL+DEGQ YF++M  +H I   + H+  +VDL  RAG
Sbjct: 398 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAG 456

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
            L +A   I  MP   +A VW  +L ACR+                L PHDS  +VLLSN
Sbjct: 457 RLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 516

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA+ G   + A+VRK+M +  VKKE   SW+E++N+ + F+A D SHP   +I    E+
Sbjct: 517 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEK 576

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           +S ++K+ GY PDTS+VL  ++ + +E  L  HSE+LA+AF ++ TP G  ++I KN+R+
Sbjct: 577 ISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRI 636

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCH+  K  S++  R+I+VRDTNRFHHF  G+CSC DYW
Sbjct: 637 CGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 176/336 (52%), Gaps = 1/336 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD+ P ++ V +  L+  Y +     EAL LF  +  LG      TLSS+LK  G  
Sbjct: 160 QDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG 219

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQ+H   +K G+  +V+V +SL+D+Y R  ++ + + +F+ +   NVVSW +L+
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    + V+ LF +M  +G +P  FT+S+VL   A  G +     VH  VIK+GG+
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLAC-ASSGSLEQGKWVHAHVIKSGGQ 338

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            +  + N LI MY KS  ++DA+ VF  +  +D ++WNS+++GY  + L  EA + F  M
Sbjct: 339 PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 398

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             A  +    TF+SV+  C+ +  L   +     + K+ I+        ++    + G++
Sbjct: 399 LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRL 458

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
            +A+K    M        W A++     +  +DL V
Sbjct: 459 NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGV 494



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 193/377 (51%), Gaps = 7/377 (1%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           S +L  C  L     GR +H     S F  D+ +   ++++Y +  ++E+ + +FD M  
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            ++VSWT L+SGY+++      L LF +M   G +PN FT S++L             Q+
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +K G ++   V ++L+ MY +   +R+A+ +F+ +  ++ ++WN+++AG+      
Sbjct: 229 HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
                 F  M   G E T  T+ SV+  CA++  L   + +H+ V+K+G      I   L
Sbjct: 289 EHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 347

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+K G ++DA K+F  + + +D+VSW ++ISG+ Q+G    A+  F QM +  V+PN
Sbjct: 348 IDMYAKSGSIKDAKKVFRRLVK-QDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPN 406

Query: 382 GFTYSIILTA---QPAVSPFQVHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFE 437
             T+  +LTA      +   Q +  ++K +  E   +    +++   + G L+EA K  E
Sbjct: 407 EITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIE 466

Query: 438 LIDEKDIVA-WSAMLAG 453
            +  K   A W A+L  
Sbjct: 467 EMPIKPTAAVWGALLGA 483


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/742 (35%), Positives = 397/742 (53%), Gaps = 24/742 (3%)

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           + +  +++ + +R   +    RVF  M E +V SW  ++ GY +    +  L+L++RM  
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLW 190

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G++P+ +TF  VL             +VH  V++ G      V NAL++MY K   +  
Sbjct: 191 AGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFDGM   D I+WN+M+AG+  N       E F  M     +    T  SV      
Sbjct: 251 ARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             E+  A+++H   +K G   D      L+  Y+  G+M DA KIFS M E KD +SWTA
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM-ETKDAMSWTA 369

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           MISG+ +NG  D A+  +  M    V P+  T +  L A   +    V   + +    K 
Sbjct: 370 MISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKG 429

Query: 413 F----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           F     V  ALL  Y K   +D+A +VF+ + EKD+V+WS+M+AG+     +  A+  +R
Sbjct: 430 FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFR 489

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            +    VKPN  TF + ++AC A + A+  GK+ HA  ++  + +   V +AL+ +Y K 
Sbjct: 490 YMLGH-VKPNSVTFIAALSACAA-TGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKC 547

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G    A   F    ++D+VSWN M+ G+  HG    AL +F +M       D +TF+ ++
Sbjct: 548 GQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALL 607

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC+ AG+V +G + F +M  +  I P ++HY+CMVDL SR G L +A ++INRMP    
Sbjct: 608 CACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPD 667

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A VW  +L  CR              ++ L+P+D A +VLL ++Y   G W + ARVRK 
Sbjct: 668 AAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKT 727

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M ++ ++++ G SW+EVK  T++FL  D SHPQ  +I   L  +  R+K  G+ P  S  
Sbjct: 728 MREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLE 787

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
            +++ ++    IL  HSERLA+AFGL+ T  G  + + KN   C  CH + K IS++ RR
Sbjct: 788 DKEVSEDD---ILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRR 844

Query: 815 DIVVRDTNRFHHFKEGLCSCGD 836
           +I VRDT + H FK+G CSCGD
Sbjct: 845 EITVRDTKQLHCFKDGDCSCGD 866



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 277/557 (49%), Gaps = 16/557 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F + P+R+   +N ++  Y +    +EAL+L+  +   G+     T   VL+TCG + D
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR+VH   ++ GF  +V+V  +LV +Y +  ++   R+VFD M  ++ +SW ++++G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGG 210
           +  N   +  LELF  M    ++PN  T ++V    G+L++ G    A ++H   +K G 
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGF---AKEMHGFAVKRGF 329

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +  + CN+LI MY     + DA  +F  ME +D+++W +M++GY  N    +A E +  
Sbjct: 330 AIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYAL 389

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L        T  S +  CA    L +  +LH      G      +   L+  Y+K   
Sbjct: 390 MELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 449

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++ A ++F  M E KDVVSW++MI+G   N     A+ +F  M    V+PN  T+   L+
Sbjct: 450 IDKAIEVFKFMAE-KDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALS 507

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A  A        ++HA++++        V  ALL+ YVK G    A   F +  EKD+V+
Sbjct: 508 ACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVS 567

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ ML+G+   G  + A+ ++ Q+   G  P+E TF +++ AC+     ++  + FH  +
Sbjct: 568 WNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMT 627

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT--- 562
            K  +   L   + +V + S+ G +  A  +  R   K D   W +++ G   H H    
Sbjct: 628 EKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELG 687

Query: 563 KKALEVFKEMRRQDLEF 579
           + A +V  E+   D+ +
Sbjct: 688 ELAAKVILELEPNDVAY 704



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 1/122 (0%)

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           L S    P+E  + ++   C     AV+ G +  A +     +  L + +A+++M  + G
Sbjct: 87  LESSPEPPDEGAYVALFRLCEW-RRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFG 145

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
            I  A  VF +  +RD+ SWN M+ GY + G  ++AL+++  M    +  D  TF  V+ 
Sbjct: 146 EIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLR 205

Query: 590 AC 591
            C
Sbjct: 206 TC 207


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 248/636 (38%), Positives = 374/636 (58%), Gaps = 33/636 (5%)

Query: 234 RAVFDGMEDRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           R++F    D+ S+ +WNS++A +  +   ++A   F++M        RSTF   IK C++
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             +L   +Q+H Q    G   D  + + L+  YSKCG + DA K+F  + E ++VVSWT+
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPE-RNVVSWTS 157

Query: 353 MISGHLQNGAIDLAVNFFCQ-----------MTREGVRPNGFTYSIILTAQPAVSPFQV- 400
           MISG++QN     AV  F +           +   GV  +      +++A   V    V 
Sbjct: 158 MISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217

Query: 401 ---HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
              H   +K  +E   +VG  L++AY K G +  + KVF+ ++E D+ +W++++A YAQ 
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQN 277

Query: 458 GDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
           G +  A  ++  +   G V+ N  T S+V+ AC A S A++ GK  H   +K +L + L 
Sbjct: 278 GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLAC-AHSGALQIGKCIHDQVVKMELEDNLV 336

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V +++V MY K G +E A + F R +++++ SW  M+ GY  HGH K+A++VF EM R  
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG 396

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++ + ITF+ V+ AC+HAGL+ EG  +F+ M  E  + P +EHYSCMVDL  RAG L++A
Sbjct: 397 IKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEA 456

Query: 637 MDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
             +I  M       VW ++L ACR              L  L P +   YVLLSN+YA  
Sbjct: 457 YGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADA 516

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G W +  R+R LM +  + K  GYS +E K + + FL GD  HPQ  +IY  L+EL+ +L
Sbjct: 517 GRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKL 576

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           ++ GY P+ + VL D+D E K  +L  HSE+LA+AFG++ +  G+ +QI+KNLR+CGDCH
Sbjct: 577 QEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCH 636

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             IKLISK+  R+IV+RD+ RFHHFK+GLCSCGDYW
Sbjct: 637 FAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 222/441 (50%), Gaps = 20/441 (4%)

Query: 32  QSLFDRSPQRNFV-EYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           +S+F +   +  V  +N ++ ++ R     +AL  F  +R+L L    ST    +K+C  
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L+D   G+Q+H +    G+  D+ V+++L+D+Y +   + D R++FD++ E NVVSWTS+
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158

Query: 151 LSGYARNKMNDRVLELFH-----------RMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +SGY +N+     + LF             +   G+  +S     V+   A   + +   
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            VH + +K G E   +V N L+  Y K   +  +R VFDGME+ D  +WNS++A Y  N 
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278

Query: 260 LHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           L +EAF  F++M   G       T  +V+  CA +  L++ + +H QV+K  ++ +  + 
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T ++  Y KCG++E A K F  ++  K+V SWT M++G+  +G    A+  F +M R G+
Sbjct: 339 TSIVDMYCKCGRVEMARKAFDRLKR-KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAA 433
           +PN  T+  +L A       +   H         + E      + +++   + G L EA 
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457

Query: 434 KVFELIDEK-DIVAWSAMLAG 453
            + + +  K D + W ++L  
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGA 478



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 156/342 (45%), Gaps = 15/342 (4%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFL-----------GIRRLGLP 75
           Y    + LFD  P+RN V +  ++  Y ++   +EA+ LF             I  +G+ 
Sbjct: 136 YLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVG 195

Query: 76  LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV 135
           +    L  V+  C  +        VH   VK GF   + V  +L+D Y +   +   R+V
Sbjct: 196 VDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKV 255

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGI 194
           FD M E++V SW SL++ YA+N ++     LF  M   G ++ N+ T S VL   A  G 
Sbjct: 256 FDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGA 315

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +     +H  V+K   E    V  +++ MY K   V  AR  FD ++ ++  +W  MVAG
Sbjct: 316 LQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAG 375

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           Y  +    EA + F  M   G +    TFVSV+  C+    L+      ++ +K   D +
Sbjct: 376 YGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNK-MKCEFDVE 434

Query: 315 HNIR--TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
             I   + ++    + G +++A  +   M+   D + W +++
Sbjct: 435 PGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/579 (39%), Positives = 357/579 (61%), Gaps = 21/579 (3%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           + R  + +++K C   K L   R +H  ++++    D  +   L+  Y+KCG +E+A K+
Sbjct: 49  VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKV 108

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA--- 394
           F  M E +D V+WT +ISG+ Q+     A+  F QM R G  PN FT S ++ A  A   
Sbjct: 109 FDKMPE-RDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERR 167

Query: 395 -VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                Q+H   +K  ++ +  VG+ALL+ Y + G++D+A  VF+ ++ ++ V+W+A++AG
Sbjct: 168 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 227

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +A+   TE A+++++ +  EG +P+ F+++S+  AC++ +  +EQGK  HA  IK+    
Sbjct: 228 HARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSS-TGFLEQGKWVHAYMIKSGEKL 286

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
                + L+ MY+K G+I  A ++F R  KRD+VSWNS++  YAQHG   +A+  F+EMR
Sbjct: 287 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMR 346

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           R  +  + I+F+ V+TAC+H+GL+DEG  Y+++M  +  I     HY  +VDL  RAG L
Sbjct: 347 RGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVLEAWHYVTIVDLLGRAGDL 405

Query: 634 EKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMY 679
            +A+  I  MP   +A +W+ +L ACR+                L P D   +V+L N+Y
Sbjct: 406 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 465

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A+ G W + ARVRK M +  VKKE   SW+E++N  + F+A D  HPQ  +I  K EE+ 
Sbjct: 466 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 525

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            ++K+ GY PDTS+V+  +D + +E  L  HSE++A+AF L+ TP G+ + I KN+RVCG
Sbjct: 526 AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCG 585

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH+ IKL SK   R+I+VRDTNRFHHFK+G CSC DYW
Sbjct: 586 DCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 213/420 (50%), Gaps = 39/420 (9%)

Query: 74  LPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGR 133
           +P+     +++LK C        GR VH   ++S F  D+ ++ +L+++Y +  ++E+ R
Sbjct: 47  IPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEAR 106

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           +VFD M E + V+WT+L+SGY+++      L LF++M   G  PN FT S+V+   A E 
Sbjct: 107 KVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAER 166

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
                 Q+H   +K G +    V +AL+ +Y +  ++ DA+ VFD +E R+ ++WN+++A
Sbjct: 167 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 226

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           G+       +A E F  M   G   +  ++ S+   C++T  L   + +H+ ++K+G   
Sbjct: 227 GHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 286

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
                  L+  Y+K G + DA KIF  + + +DVVSW ++++ + Q+G  + AV +F +M
Sbjct: 287 VAFAGNTLLDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGNEAVCWFEEM 345

Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            R G+RPN  ++  +LTA                                   G+LDE  
Sbjct: 346 RRGGIRPNEISFLSVLTACS-------------------------------HSGLLDEGW 374

Query: 434 KVFELIDEKDIV--AWS--AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             +EL+ +  IV  AW    ++    + GD   A++   ++    ++P    + +++NAC
Sbjct: 375 HYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLNAC 431



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 165/325 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+ P+R+FV +  L+  Y +     +AL LF  + R G      TLSSV+K     
Sbjct: 106 RKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAE 165

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H  CVK GF  +V+V ++L+DLY R   ++D + VFD +   N VSW +L+
Sbjct: 166 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 225

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    ++ LELF  M  EG +P+ F+++++ G  +  G +     VH  +IK+G +
Sbjct: 226 AGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 285

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +V    N L+ MY KS  + DAR +FD +  RD ++WNS++  Y  +    EA   F  M
Sbjct: 286 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEM 345

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G      +F+SV+  C+ +  L      +  + K+GI  +      ++    + G +
Sbjct: 346 RRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDL 405

Query: 332 EDASKIFSMMREMKDVVSWTAMISG 356
             A +    M        W A+++ 
Sbjct: 406 NRALRFIEEMPIEPTAAIWKALLNA 430


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 233/575 (40%), Positives = 358/575 (62%), Gaps = 21/575 (3%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           + SV++ C  ++ L   RQLH ++L +G+  D  + T L+  Y+ CG +  A ++F  M 
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPF 398
           + ++V  W  +I  + ++G  ++A+  +  M   GV P+ FTY + L A  A+    +  
Sbjct: 125 K-RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGR 183

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           +VH  ++ T++ +   V   L++ Y K G +D+A  VF+ I  +D V W++M+A Y Q G
Sbjct: 184 EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG 243

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A+ + R + + GV P   T  S I+A  A +AA+ +G++ H    +   +    + 
Sbjct: 244 RPMEALSLCRDMAANGVGPTIATLVSTISA-AADAAALPRGRELHGFGWRRGFDRQDKLK 302

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DL 577
           ++LV MY+K G ++ A  +F++  KR+LVSWN+MICGY  HGH  +AL++F +MR +  +
Sbjct: 303 TSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQV 362

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
             D ITF+GV++AC H G+V E +++F +MV+ + I PT++H++C+VD+   AG  E+A 
Sbjct: 363 TPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAY 422

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
           D+I  MP    + +W  +L  C+              LI L+P D+  YVLLSN+YA +G
Sbjct: 423 DLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSG 482

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W++ ARVRKLM +R +KK  G SWIE+K KT+ FL GD SHP+S +IY +LE L   + 
Sbjct: 483 KWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMS 542

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
           DAGY PDT  V  D+ D+ K  ++  HSERLAIAFGL++TP+G  L + KNLRVC DCH 
Sbjct: 543 DAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHV 602

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VIKLIS++ +R+I++RD NR+HHF  G CSC DYW
Sbjct: 603 VIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 206/437 (47%), Gaps = 44/437 (10%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +SVL++C        GRQ+H   + SG   D  ++T LVDLY     V   RR+FD M +
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK 125

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            NV  W  L+  YAR+  ++  ++L+  M   G++P++FT+   L   A    + T  +V
Sbjct: 126 RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREV 185

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  V+         VC  L+ MY K   V DARAVFD +  RDS+ WNSM+A Y  N   
Sbjct: 186 HERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRP 245

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           MEA     +M   G   T +T VS I   A    L   R+LH    + G D    ++T L
Sbjct: 246 MEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSL 305

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRP 380
           +  Y+K G ++ A  +F  + + +++VSW AMI G+  +G  D A+  F +M  E  V P
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMK-RELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTP 364

Query: 381 NGFTYSIILTA-----------------------QPAVSPFQVHAHII--KTNYEKSF-- 413
           +  T+  +L+A                       +P V  F     ++     +E+++  
Sbjct: 365 DNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424

Query: 414 ----------SVGTALLNA-YVKKGI-LDEAA--KVFELIDEKDIVAWSAMLAGYAQIGD 459
                      +  ALLN   + K + L E A  K+ EL + +D   +  +   YAQ G 
Sbjct: 425 IKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIEL-EPEDAGNYVLLSNIYAQSGK 483

Query: 460 TEGAVKIYRQLTSEGVK 476
            E A ++ + +T+ G+K
Sbjct: 484 WEKAARVRKLMTNRGLK 500



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 199/415 (47%), Gaps = 21/415 (5%)

Query: 177 PNSFT-FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           PNS+  +++VL        + T  Q+H  ++ +G    T +   L+ +Y    +V  AR 
Sbjct: 59  PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARR 118

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           +FDGM  R+   WN ++  Y  +  H  A + +  M   G E    T+   +K CA   +
Sbjct: 119 LFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLD 178

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           L   R++H +VL      D  +  GL+  Y+KCG ++DA  +F  +R ++D V W +MI+
Sbjct: 179 LETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIR-VRDSVVWNSMIA 237

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
            + QNG    A++    M   GV P   T    ++A    +      ++H    +  +++
Sbjct: 238 AYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDR 297

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              + T+L++ Y K G +  A  +FE + ++++V+W+AM+ GY   G  + A+K++ ++ 
Sbjct: 298 QDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMR 357

Query: 472 SEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMY 525
            E  V P+  TF  V++AC      V++ K+F        SIK  + +  C    LV + 
Sbjct: 358 VEAQVTPDNITFVGVLSACNH-GGMVKEAKEFFGLMVDVYSIKPTVQHFTC----LVDVL 412

Query: 526 SKKGNIESASEVFK-RQRKRDLVSWNSMICGYAQHGHT---KKALEVFKEMRRQD 576
              G  E A ++ K    + D   W +++ G   H +    + AL+   E+  +D
Sbjct: 413 GHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPED 467



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 154/328 (46%), Gaps = 4/328 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+RN   +N L+  Y RD  H+ A+ L+ G+   G+     T    LK C  L
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL 176

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR+VH   + + +  D+ V   LVD+Y +   V+D R VFD +   + V W S++
Sbjct: 177 LDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMI 236

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + Y +N      L L   M   G+ P   T  + +   AD   +    ++H    + G +
Sbjct: 237 AAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFD 296

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  +L+ MY KS  V+ AR +F+ +  R+ ++WN+M+ GY  +    EA + FN M
Sbjct: 297 RQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKM 356

Query: 272 GLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKC 328
            +  A++T    TFV V+  C     ++ A++    ++    I       T L+      
Sbjct: 357 RVE-AQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHA 415

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISG 356
           G+ E+A  +   M    D   W A+++G
Sbjct: 416 GRFEEAYDLIKGMPMQPDSGIWGALLNG 443


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 266/825 (32%), Positives = 451/825 (54%), Gaps = 28/825 (3%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++F     ++ V +N ++  Y      QEA++LF  ++R GL    ++  S+L  C    
Sbjct: 107 NVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPI 166

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              FG Q+H    K+G+  DVNVST+L+++Y +  ++E  R+VF++M E NVVSWT+++S
Sbjct: 167 VLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMIS 226

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY ++  +     LF ++   G +PN  +F+++LG   +   +   +++H  + + G E 
Sbjct: 227 GYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQ 286

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V NALISMY +   + +AR VFD +   + ++WN+M+AGY    +  EAF  F +M 
Sbjct: 287 EVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFME-EAFRLFRDMQ 345

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G +  R T+ S++ +CA   +L   ++LHSQ+++   + D  + T L+  Y+KCG +E
Sbjct: 346 QKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLE 405

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A K+F+ M E K+ VSW A I+   ++G+   A   F QM R+ V P+  T+  +L + 
Sbjct: 406 EARKVFNQMPE-KNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSC 464

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            +   F+    +H  I +     +  V  AL++ Y + G L +A +VF  I  +D+ +W+
Sbjct: 465 TSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWN 524

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM+A Y Q G    A  ++ +  SEG K +++TF +V+ A  A    ++ G++ H    K
Sbjct: 525 AMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRA-IANLEDLDAGRKIHGLVEK 583

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
           A L   + + + L+ MYSK G++  A  VFK  +++D+V WN+M+  Y    H + AL++
Sbjct: 584 AGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKL 643

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F++MR + +  D  T+  V+ AC   G ++ G++ F   + E  +     HY+CMV    
Sbjct: 644 FQQMRLEGVNPDSATYTSVLNACARLGAIEHGKK-FHTQLKEAAMETDTRHYACMVAALG 702

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS-AIYV 673
           RA +L++A + I  +   + A +W ++L ACR              L+ ++   S A+  
Sbjct: 703 RASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCE 762

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
            L N+YAA G W++ + ++  M +  +      + IEV ++ ++F+    S PQ   +  
Sbjct: 763 QLMNIYAAAGRWEDVSVIKATMREAGLLAPKSCT-IEVNSEFHTFMTNHFS-PQIG-VED 819

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           K+EEL  ++ D G+  D  Y     D   KE + S   E LA+A+GL  TP G  ++ V 
Sbjct: 820 KIEELVWKMMDKGFLLDPHYAPN--DSREKERLFSHCPELLAVAYGLEHTPPGVLVRCVT 877

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +  V    H ++K ISK   R I VRD N FH+FK+G+CSCGDYW
Sbjct: 878 DSPVTDPSHRMLKFISKAYNRGIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 184/608 (30%), Positives = 328/608 (53%), Gaps = 28/608 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH     + F  D+ ++  L+ +Y +  ++ED   VF  M + +VVSW +++SGYA 
Sbjct: 70  GKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYAL 129

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +      ++LF++MQ EG+KPN  +F ++L       ++    Q+H+ + K G E   +V
Sbjct: 130 HGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNV 189

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             ALI+MY K   +  AR VF+ M +R+ ++W +M++GYV +    EAF  F  +  +G 
Sbjct: 190 STALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGT 249

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +  + +F S++  C    +L    +LH+ + + G++ +  +   L+  Y++CG + +A +
Sbjct: 250 QPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQ 309

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  +R   + VSW AMI+G+ + G ++ A   F  M ++G +P+ FTY+ +L      +
Sbjct: 310 VFDNLRS-PNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRA 367

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 ++H+ I++T +E   +V TAL++ Y K G L+EA KVF  + EK+ V+W+A +A
Sbjct: 368 DLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIA 427

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA-CSIKAKL 511
              + G  + A ++++Q+  + V P+  TF +++N+CT+P    E+G+  H        L
Sbjct: 428 CCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPE-DFERGRYIHGKIDQWGML 486

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +N L V++AL++MY + G +  A EVF R R+RDL SWN+MI  Y QHG    A ++F +
Sbjct: 487 SNNL-VANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIK 545

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
            + +  + D  TFI V+ A  +   +D G++    +V +  +   +   + ++ +YS+ G
Sbjct: 546 YKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHG-LVEKAGLEKDIRILTTLIKMYSKCG 604

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAA----------------CRLISLQPHDSAIYVLL 675
            L  A  +   +        W  +LAA                 RL  + P DSA Y  +
Sbjct: 605 SLRDAYSVFKNVQ-EKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNP-DSATYTSV 662

Query: 676 SNMYAATG 683
            N  A  G
Sbjct: 663 LNACARLG 670



 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 261/476 (54%), Gaps = 7/476 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+   +RN V +  ++  Y +    +EA  LF  + R G      + +S+L  C   
Sbjct: 207 RKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNP 266

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G ++H    ++G  ++V V  +L+ +Y R  ++ + R+VFD++   N VSW +++
Sbjct: 267 NDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMI 326

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY    M +    LF  MQ +G +P+ FT++++L + AD   +    ++H+ +++   E
Sbjct: 327 AGYGEGFM-EEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWE 385

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V  ALISMY K   + +AR VF+ M ++++++WN+ +A    +    EAF+ F  M
Sbjct: 386 ADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQM 445

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                     TF++++  C + ++    R +H ++ + G+  ++ +   L+  Y +CGK+
Sbjct: 446 RRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKL 505

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA ++F  +R  +D+ SW AMI+ ++Q+GA   A + F +   EG + + +T+  +L A
Sbjct: 506 ADAREVFYRIRR-RDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRA 564

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       ++H  + K   EK   + T L+  Y K G L +A  VF+ + EKD+V W
Sbjct: 565 IANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCW 624

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +AMLA Y      + A+K+++Q+  EGV P+  T++SV+NAC A   A+E GK+FH
Sbjct: 625 NAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNAC-ARLGAIEHGKKFH 679



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 229/393 (58%), Gaps = 9/393 (2%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +G  G +   + +   ++ C   K L   +++H  +     + D  +   L+  YSKCG 
Sbjct: 42  LGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGS 101

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +EDA+ +F  M E KDVVSW AMISG+  +G    AV+ F QM REG++PN  ++  IL+
Sbjct: 102 IEDANNVFQSM-EDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILS 160

Query: 391 A--QPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   P V  F  Q+H+HI K  YE   +V TAL+N Y K G L+ A KVF  + E+++V+
Sbjct: 161 ACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVS 220

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM++GY Q GD++ A  ++++L   G +PN+ +F+S++ ACT P+  +EQG + HA  
Sbjct: 221 WTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPN-DLEQGLKLHAYI 279

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            +A L   + V +AL++MY++ G++ +A +VF   R  + VSWN+MI GY + G  ++A 
Sbjct: 280 KQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAF 338

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +F++M+++  + D  T+  ++  C     ++ G++    +V        +   + ++ +
Sbjct: 339 RLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRT-AWEADVTVATALISM 397

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           Y++ G LE+A  + N+MP   +A  W   +A C
Sbjct: 398 YAKCGSLEEARKVFNQMP-EKNAVSWNAFIACC 429


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 275/882 (31%), Positives = 463/882 (52%), Gaps = 88/882 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR----RLGLPLFGS--TLSSVL 85
           + +FD  P+R+ + +N ++  YC + +   A +L+  I     R G  L      L  VL
Sbjct: 54  REVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVL 113

Query: 86  KTCGCLFDHVFGRQ-------VHCECVKSG------------FARDVNVSTSLVDLYMRT 126
           +    +FD +  R        + C  V++G             +RDV+   S++  Y  +
Sbjct: 114 EARR-VFDGMLERNTVAWNAMISCY-VQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHS 171

Query: 127 NNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL 186
             + D R +F+ M E N+VSWT ++SGY R + + +  ++F +M  EG+ P+   F++ L
Sbjct: 172 LQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASAL 231

Query: 187 GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD-ARAVFDGMEDRDS 245
             +   G +     +  + +K G E    +  A++++Y +   V D A   F+ M +R+ 
Sbjct: 232 SAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNE 291

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
            TW++M+A  +++   ++A           +   R+  ++ +  C    +   AR L  Q
Sbjct: 292 YTWSTMIAA-LSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDD---ARILFEQ 347

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           +    I    N    L+  Y + G + +A ++F  M   ++ +SW  MI+G+ QNG  + 
Sbjct: 348 I-PEPIVVSWN---ALITGYMQNGMVNEAKELFDKM-PFRNTISWAGMIAGYAQNGRSEE 402

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE-KSFSVGT--- 417
           A+    ++ R G+ P+  + + I  A   +       QVH+  +K   +  SF+      
Sbjct: 403 ALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALIT 462

Query: 418 ---------------------------ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                                      + L A V+  +LDEA   F+ +  +D V+W+ +
Sbjct: 463 MYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTI 522

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           ++ YA    +  A+  ++ +  E   PN    + ++  C +  A+ + G+Q H  +IK  
Sbjct: 523 ISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGAS-KIGQQIHTVAIKLG 581

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           +++ L V++AL++MY K G  +S   +F    +RD+ +WN++I GYAQHG  ++A+++++
Sbjct: 582 MDSELIVANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQ 640

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M    +  + +TF+G++ AC+HAGLVDEG ++F  M  ++ + P  EHY+CMVDL  R 
Sbjct: 641 HMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRT 700

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLS 676
           G ++ A   I  MP      +W  +L AC+              L  ++P ++  YV+LS
Sbjct: 701 GDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLS 760

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N+Y++ G W E A VRK+M  + V KE G SW ++K+K +SF+ GD  H Q  +I + LE
Sbjct: 761 NIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE 820

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           EL T LK  GY PDT +VL DID+E KE+ L  HSE+LA+A+ L+ATP G P+QI+KNLR
Sbjct: 821 ELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLR 880

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +CGDCHT IK +S + +R I +RD NRFHHF+ G CSC D+W
Sbjct: 881 ICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 249/550 (45%), Gaps = 61/550 (11%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R  H E   SG       S  + DL  R   V + R VFD M   ++++W S++S Y  N
Sbjct: 26  RHAHGELEVSG------CSARIRDLG-RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
            M D   +L+  +       N  T + +L      G V  A +V   +++      T   
Sbjct: 79  GMPDAARDLYDAIS----GGNMRTGAILLSGYGRLGRVLEARRVFDGMLERN----TVAW 130

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN------------------- 258
           NA+IS Y+++  +  AR +FD M  RD  +WNSM+ GY  +                   
Sbjct: 131 NAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLV 190

Query: 259 ------------ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
                       E H +A++ F  M   G    +S F S +        L +   L    
Sbjct: 191 SWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLA 250

Query: 307 LKNGIDFDHNIRTGLMVAYSK-CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           LK G + D  I T ++  YS+    ++ A K F  M E ++  +W+ MI+     G ID 
Sbjct: 251 LKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIE-RNEYTWSTMIAALSHGGRIDA 309

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
           A+  +    R+ V+      ++I T             + +   E       AL+  Y++
Sbjct: 310 AIAVY---ERDPVKSIACRTALI-TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQ 365

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G+++EA ++F+ +  ++ ++W+ M+AGYAQ G +E A+ + ++L   G+ P+  + +S+
Sbjct: 366 NGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSI 425

Query: 486 INACTAPSAAVEQGKQFHACSIKA--KLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
             AC+    A+E G Q H+ ++K   + N+  C  +AL+TMY K  N+E A +VF R   
Sbjct: 426 FFACSNI-VALETGTQVHSLAVKVGCQFNSFAC--NALITMYGKCRNMEYARQVFSRMVT 482

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           +D+VSWNS +    Q+    +A   F  M    L  D +++  +I+A  HA   +E    
Sbjct: 483 KDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGA 538

Query: 604 FDIMVNEHHI 613
           F  M  EH +
Sbjct: 539 FKTMFCEHEL 548


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/745 (34%), Positives = 421/745 (56%), Gaps = 22/745 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGC 90
           Q LFD  P RN V ++ ++  Y +     EAL LF   +R          L+SV++ C  
Sbjct: 107 QKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQ 166

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L +     Q+H   VK GF +DV V TSL+D Y +   V++ R +FD +     V+WT++
Sbjct: 167 LGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAI 226

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++GYA+   ++  L+LF++M+   + P+ +  S+VL   +    +    Q+H  V++ G 
Sbjct: 227 IAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGF 286

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           ++  SV N +I  YLK   V+  R +F+ + D+D ++W +M+AG + N  H +A + F  
Sbjct: 287 DMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVE 346

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G +       SV+  C + + L+  RQ+H+  +K  ID D  ++ GL+  Y+KC  
Sbjct: 347 MVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDS 406

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----S 386
           + +A K+F ++  + +VVS+ AMI G+ +   +  A++ F +M      P   T+     
Sbjct: 407 LTNARKVFDLVAAI-NVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLG 465

Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +  +        Q+H  IIK         G+AL++ Y K   + +A  VFE I ++DIV 
Sbjct: 466 LSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVV 525

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM +GY+Q  + E ++K+Y+ L    +KPNEFTF++VI A  +  A++  G+QFH   
Sbjct: 526 WNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVI-AAASNIASLRHGQQFHNQV 584

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           IK  L++   V+++LV MY+K G+IE + + F    +RD+  WNSMI  YAQHG   KAL
Sbjct: 585 IKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKAL 644

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           EVF+ M  + ++ + +TF+G+++AC+HAGL+D G  +F+ M ++  I P ++HY+CMV L
Sbjct: 645 EVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGIDHYACMVSL 703

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIY 672
             RAG + +A + + +MP   +A VWR++L+ACR+              IS  P DS  Y
Sbjct: 704 LGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSY 763

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           +LLSN++A+ G W     VR+ M+  +V KE G+SWIEV N+ + F+A D +H  S  I 
Sbjct: 764 ILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLIS 823

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQD 757
             L+ L  ++K  GY P+ +    D
Sbjct: 824 LVLDNLILQIKGFGYVPNAATFFLD 848



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 169/576 (29%), Positives = 305/576 (52%), Gaps = 19/576 (3%)

Query: 70  RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNN 128
           R++G  L G  L   L +   L  H + +++H   V  GF + DV +  +L+  Y + N 
Sbjct: 47  RKIGREL-GKLLQ--LPSPNILTSHYY-KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNL 102

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR-MQVEGIKPNSFTFSTVLG 187
             D +++FD M   N+V+W+S++S Y ++  +   L LF R M+    KPN +  ++V+ 
Sbjct: 103 QSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVR 162

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
                G ++ A+Q+H  V+K G      V  +LI  Y K   V +AR +FDG++ + ++T
Sbjct: 163 ACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVT 222

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           W +++AGY        + + FN M        R    SV+  C+  + L   +Q+H  VL
Sbjct: 223 WTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVL 282

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           + G D D ++  G++  Y KC K++   K+F+ + + KDVVSWT MI+G +QN     A+
Sbjct: 283 RRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVD-KDVVSWTTMIAGCMQNSFHGDAM 341

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
           + F +M R+G +P+ F  + +L +  ++       QVHA+ IK N +    V   L++ Y
Sbjct: 342 DLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMY 401

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K   L  A KVF+L+   ++V+++AM+ GY++      A+ ++R++      P   TF 
Sbjct: 402 AKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFV 461

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
           S++   ++    +E   Q H   IK  ++      SAL+ +YSK   +  A  VF+    
Sbjct: 462 SLLGL-SSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYD 520

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           RD+V WN+M  GY+Q    +++L+++K+++   L+ +  TF  VI A ++   +  GQQ+
Sbjct: 521 RDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQF 580

Query: 604 FDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKA 636
            + ++    +   + T    + +VD+Y++ G +E++
Sbjct: 581 HNQVIKMGLDDDPFVT----NSLVDMYAKCGSIEES 612



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 236/475 (49%), Gaps = 40/475 (8%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LF+R   ++ V +  ++    ++S H +A++LF+ + R G        +SVL +C
Sbjct: 307 KTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSC 366

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L     GRQVH   +K     D  V   L+D+Y + +++ + R+VFD +   NVVS+ 
Sbjct: 367 GSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYN 426

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ GY+R       L+LF  M++    P   TF ++LG+ +   ++  + Q+H ++IK 
Sbjct: 427 AMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKF 486

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G  + +   +ALI +Y K   V DAR VF+ + DRD + WN+M +GY     + E+ + +
Sbjct: 487 GVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLY 546

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            ++ ++  +    TF +VI   +    LR  +Q H+QV+K G+D D  +   L+  Y+KC
Sbjct: 547 KDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKC 606

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +E++ K FS   + +D+  W +MIS + Q+G    A+  F +M  EGV+PN  T+   
Sbjct: 607 GSIEESHKAFSSTNQ-RDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTF--- 662

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID----EKDI 444
                                         LL+A    G+LD     FE +     E  I
Sbjct: 663 ----------------------------VGLLSACSHAGLLDLGFHHFESMSKFGIEPGI 694

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             ++ M++   + G    A +  +++    +KP    + S+++AC   S  VE G
Sbjct: 695 DHYACMVSLLGRAGKIYEAKEFVKKMP---IKPAAVVWRSLLSACRV-SGHVELG 745



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 3/141 (2%)

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF-KEMRRQDL 577
           + L+  YSK      A ++F     R+LV+W+SM+  Y QHG++ +AL +F + MR    
Sbjct: 91  NTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSE 150

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + +      V+ ACT  G + +  Q    +V    +       S ++D Y++ G +++A 
Sbjct: 151 KPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTS-LIDFYAKRGYVDEAR 209

Query: 638 DIINRMPFAASATVWRTVLAA 658
            I + +    + T W  ++A 
Sbjct: 210 LIFDGLKVKTTVT-WTAIIAG 229


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 275/882 (31%), Positives = 463/882 (52%), Gaps = 88/882 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR----RLGLPLFGS--TLSSVL 85
           + +FD  P+R+ + +N ++  YC + +   A +L+  I     R G  L      L  VL
Sbjct: 54  REVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVL 113

Query: 86  KTCGCLFDHVFGRQ-------VHCECVKSG------------FARDVNVSTSLVDLYMRT 126
           +    +FD +  R        + C  V++G             +RDV+   S++  Y  +
Sbjct: 114 EARR-VFDGMLERNTVAWNAMISCY-VQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHS 171

Query: 127 NNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL 186
             + D R +F+ M E N+VSWT ++SGY R + + +  ++F +M  EG+ P+   F++ L
Sbjct: 172 LQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASAL 231

Query: 187 GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD-ARAVFDGMEDRDS 245
             +   G +     +  + +K G E    +  A++++Y +   V D A   F+ M +R+ 
Sbjct: 232 SAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNE 291

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
            TW++M+A  +++   ++A           +   R+  ++ +  C    +   AR L  Q
Sbjct: 292 YTWSTMIAA-LSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDD---ARILFEQ 347

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           +    I    N    L+  Y + G + +A ++F  M   ++ +SW  MI+G+ QNG  + 
Sbjct: 348 I-PEPIVVSWN---ALITGYMQNGMVNEAKELFDKM-PFRNTISWAGMIAGYAQNGRSEE 402

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE-KSFSVGT--- 417
           A+    ++ R G+ P+  + + I  A   +       QVH+  +K   +  SF+      
Sbjct: 403 ALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALIT 462

Query: 418 ---------------------------ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                                      + L A V+  +LDEA   F+ +  +D V+W+ +
Sbjct: 463 MYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTI 522

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           ++ YA    +  A+  ++ +  E   PN    + ++  C +  A+ + G+Q H  +IK  
Sbjct: 523 ISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGAS-KIGQQIHTVAIKLG 581

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           +++ L V++AL++MY K G  +S   +F    +RD+ +WN++I GYAQHG  ++A+++++
Sbjct: 582 MDSELIVANALISMYFKCGCADS-RRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQ 640

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M    +  + +TF+G++ AC+HAGLVDEG ++F  M  ++ + P  EHY+CMVDL  R 
Sbjct: 641 HMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRT 700

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLS 676
           G ++ A   I  MP      +W  +L AC+              L  ++P ++  YV+LS
Sbjct: 701 GDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLS 760

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N+Y++ G W E A VRK+M  + V KE G SW ++K+K +SF+ GD  H Q  +I + LE
Sbjct: 761 NIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE 820

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           EL T LK  GY PDT +VL DID+E KE+ L  HSE+LA+A+ L+ATP G P+QI+KNLR
Sbjct: 821 ELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLR 880

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +CGDCHT IK +S + +R I +RD NRFHHF+ G CSC D+W
Sbjct: 881 ICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 249/550 (45%), Gaps = 61/550 (11%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R  H E   SG       S  + DL  R   V + R VFD M   ++++W S++S Y  N
Sbjct: 26  RHAHGELEVSG------CSARIRDLG-RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHN 78

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
            M D   +L+  +       N  T + +L      G V  A +V   +++      T   
Sbjct: 79  GMPDAARDLYDAIS----GGNMRTGAILLSGYGRLGRVLEARRVFDGMLERN----TVAW 130

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN------------------- 258
           NA+IS Y+++  +  AR +FD M  RD  +WNSM+ GY  +                   
Sbjct: 131 NAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLV 190

Query: 259 ------------ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
                       E H +A++ F  M   G    +S F S +        L +   L    
Sbjct: 191 SWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLA 250

Query: 307 LKNGIDFDHNIRTGLMVAYSK-CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           LK G + D  I T ++  YS+    ++ A K F  M E ++  +W+ MI+     G ID 
Sbjct: 251 LKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIE-RNEYTWSTMIAALSHGGRIDA 309

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
           A+  +    R+ V+      ++I T             + +   E       AL+  Y++
Sbjct: 310 AIAVY---ERDPVKSIACRTALI-TGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQ 365

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G+++EA ++F+ +  ++ ++W+ M+AGYAQ G +E A+ + ++L   G+ P+  + +S+
Sbjct: 366 NGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSI 425

Query: 486 INACTAPSAAVEQGKQFHACSIKA--KLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
             AC+    A+E G Q H+ ++K   + N+  C  +AL+TMY K  N+E A +VF R   
Sbjct: 426 FFACSNI-VALETGTQVHSLAVKVGCQFNSFAC--NALITMYGKCRNMEYARQVFSRMVT 482

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           +D+VSWNS +    Q+    +A   F  M    L  D +++  +I+A  HA   +E    
Sbjct: 483 KDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGA 538

Query: 604 FDIMVNEHHI 613
           F  M  EH +
Sbjct: 539 FKTMFCEHEL 548


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 278/877 (31%), Positives = 457/877 (52%), Gaps = 86/877 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-----RRLGLPLFGSTLSSVLK 86
           + +FD  P R+ + +N ++F YC + +     +L   I     R   + L G   +  ++
Sbjct: 53  REVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYARAGRVR 112

Query: 87  TCGCLFDHVFGRQ-------VHCECVKSG------------FARDVNVSTSLVDLYMRTN 127
               +FD +  R        V C  V++G             +RDV+   +++  Y  + 
Sbjct: 113 DARRVFDGMGVRNTVAWNAMVTC-YVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQ 171

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
            +E+ R +F+ M E N VSWT ++SGY   + + R  ++F  M  EG+ P      +VL 
Sbjct: 172 LMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLS 231

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS-KMVRDARAVFDGMEDRDSI 246
            +   G       +H +V K G E    V  A+++ Y K   M+  A   F+GM  R+  
Sbjct: 232 AVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEY 291

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           TW++++A         +AF  +    L       S    + +         L  Q+H   
Sbjct: 292 TWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHE-- 349

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
             N + ++      ++  Y +   +++A  +F+ M   ++ +SW  MI+G+ +NG  + A
Sbjct: 350 -PNVVSWN-----AMITGYMQNEMVDEAEDLFNRM-PFRNTISWAGMIAGYARNGRSEQA 402

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK--------------TN 408
           +     + R+G+ P+  + +    A   +       QVH+  +K              T 
Sbjct: 403 LVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITL 462

Query: 409 YEKSFSVGT-----------------ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           Y K  S+G+                 + ++A V+  + DEA  VF  +   D+V+W+ ++
Sbjct: 463 YGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTII 522

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +  AQ      AV+I+R +  E   PN    + ++   +    A + G+Q H  +IK  +
Sbjct: 523 SACAQADQGNEAVEIFRSMLHERELPNPPILT-ILLGLSGNLGAPQLGQQIHTIAIKLGM 581

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           ++ L V++ALV+MY K  + +S  +VF    +RD+ +WN++I GYAQHG  ++A+ +++ 
Sbjct: 582 DSGLVVANALVSMYFKCSSADSL-KVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQL 640

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M    +  + +TF+G++ AC+H+GLVDEG Q+F  M +++ + P +EHY+CMVDL  RAG
Sbjct: 641 MVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAG 700

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
            ++ A   I  MP    + +W  +L AC+              L S++P ++  YV+LSN
Sbjct: 701 DVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSN 760

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +Y++ G W E A+VRKLM +R V K+ G SW+++KNK +SF+ GD  H Q   IY+ L E
Sbjct: 761 IYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWE 820

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L T LK  GY PDT +VL DID+E KE+ L  HSE+LA+A+GL+ TP G P+QI+KNLR+
Sbjct: 821 LYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRI 880

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           CGDCHT IK +S + +R+I VRD NRFHHF+ G CSC
Sbjct: 881 CGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 240/523 (45%), Gaps = 54/523 (10%)

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           R   + + R VFD M   ++++W S++  Y  N M D    L   +    ++    T + 
Sbjct: 45  RLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR----TGTI 100

Query: 185 VLGVLADEGIVATAVQVHT-MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
           +L   A  G V  A +V   M ++N     T   NA+++ Y+++  +  AR +FD M  R
Sbjct: 101 LLSGYARAGRVRDARRVFDGMGVRN-----TVAWNAMVTCYVQNGDITLARKLFDAMPSR 155

Query: 244 DSITWNSM-------------------------------VAGYVTNELHMEAFETFNNMG 272
           D  +WN+M                               ++GYV  E H  A++ F  M 
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML 215

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G    +   VSV+       +  +   +H  V K G + D  + T ++  Y+K   M 
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNML 275

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           D++  F      ++  +W+ +I+   Q G ID A   + +   + V     + + +LT  
Sbjct: 276 DSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSMLTGL 331

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                      +    +E +     A++  Y++  ++DEA  +F  +  ++ ++W+ M+A
Sbjct: 332 ARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIA 391

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA--K 510
           GYA+ G +E A+   + L  +G+ P+  + +S   AC+    A+E GKQ H+ ++KA  +
Sbjct: 392 GYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIE-ALETGKQVHSLAVKAGCQ 450

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            N+ +C  +AL+T+Y K  +I S  ++F R   +D VS+NS +    Q+    +A +VF 
Sbjct: 451 FNSYVC--NALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFN 508

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            M   D+    +++  +I+AC  A   +E  + F  M++E  +
Sbjct: 509 NMPSPDV----VSWTTIISACAQADQGNEAVEIFRSMLHEREL 547



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 216/516 (41%), Gaps = 93/516 (18%)

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH------------ 261
           TS  +A I    +   + +AR VFD M  RD I WNSM+  Y  N +             
Sbjct: 33  TSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISG 92

Query: 262 -------------------MEAFETFNNMGLAGAELTRSTFV--SVIKLCATTKELRLAR 300
                               +A   F+ MG+      R+T    +++       ++ LAR
Sbjct: 93  GNLRTGTILLSGYARAGRVRDARRVFDGMGV------RNTVAWNAMVTCYVQNGDITLAR 146

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           +L   +    +   + + TG    Y     ME+A  +F  M E ++ VSWT MISG++  
Sbjct: 147 KLFDAMPSRDVSSWNTMLTG----YCHSQLMEEARNLFERMPE-RNGVSWTVMISGYVLI 201

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTA-----QPAVSPFQVHAHIIKTNYEKSFSV 415
                A + F  M  EG+ P       +L+A     +P +    +H  + KT +E+   V
Sbjct: 202 EQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILE-SIHVLVHKTGFERDVVV 260

Query: 416 GTALLNAYVKK-GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           GTA+LN Y K   +LD A K FE +  ++   WS ++A  +Q G  + A  +Y++     
Sbjct: 261 GTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQR----- 315

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIES 533
             P      SV +  +  +     G+   A  +  +++    VS +A++T Y +   ++ 
Sbjct: 316 -DP----LKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDE 370

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A ++F R   R+ +SW  MI GYA++G +++AL   + + R+ +     +      AC++
Sbjct: 371 AEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSN 430

Query: 594 AGLVDEGQQYFDIMVNE-------------------------HHIYPTME-----HYSCM 623
              ++ G+Q   + V                             I+  M       Y+  
Sbjct: 431 IEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSF 490

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           +    +  + ++A D+ N MP +     W T+++AC
Sbjct: 491 MSALVQNNLFDEARDVFNNMP-SPDVVSWTTIISAC 525


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/741 (34%), Positives = 400/741 (53%), Gaps = 22/741 (2%)

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           + +  +++ + +R        +VF  M E +V SW  ++ GY +    +  L+L+HRM  
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G +P+ +TF  VL        +    +VH  V++ G  V   V NAL++MY K   V  
Sbjct: 189 AGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEA 248

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFDGM   D I+WN+M+AG+  N       E F +M     E    T  SV      
Sbjct: 249 ARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGL 308

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             +L  A+++H+  +K G   D      L+  YS  G+M +A  +FS M E +D +SWTA
Sbjct: 309 LSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRM-ETRDAMSWTA 367

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           MISG+ +NG  D A+  +  M    V P+  T +  L A  ++    V   + +    K 
Sbjct: 368 MISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKG 427

Query: 413 F----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           F     V  AL+  Y K  I+++A +VF+ + +KD+++WS+M+AG+        A+  +R
Sbjct: 428 FIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFR 487

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            + ++ VKPN  TF + + A  A + ++  GK+ HA  ++  + +   V +AL+ +Y K 
Sbjct: 488 HMLAD-VKPNSVTFIAALAA-CAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKC 545

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G    A   F     +D+VSWN M+ G+  HGH   AL  F EM       D +TF+ ++
Sbjct: 546 GQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALL 605

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
             C+ AG+V +G + F  M  ++ I P ++HY+CMVDL SR G L +  + INRMP    
Sbjct: 606 CGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPD 665

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A VW  +L  CR+              + L+P+D+  +VLLS++YA  G W E ++VRK 
Sbjct: 666 AAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKT 725

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M  + ++ + G SW+EVK   ++FL  D SHPQ  +I   L+ +  R+K +G+ P  SY 
Sbjct: 726 MRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYS 785

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L+D  +  K+ +L  HSERLA+AFGL+ T  G  + + KN   C  CH ++++ISK+ RR
Sbjct: 786 LED-KEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRR 844

Query: 815 DIVVRDTNRFHHFKEGLCSCG 835
           +I VRDT  FHHF++G CSCG
Sbjct: 845 EITVRDTKEFHHFRDGSCSCG 865



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 262/534 (49%), Gaps = 13/534 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F + P+R+   +N ++  Y +    +EAL+L+  +   G      T   VL++CG + D
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPD 210

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR+VH   ++ G   +V+V  +LV +Y +  +VE  R+VFD M+ ++ +SW ++++G
Sbjct: 211 LTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAG 270

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGG 210
           +  N   +  LELF  M  + ++PN  T ++V    G+L+D   +  A ++H + +K G 
Sbjct: 271 HFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD---LDFAKEIHALAVKRGF 327

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
               + CN+LI MY     + +A  VF  ME RD+++W +M++GY  N    +A E +  
Sbjct: 328 ATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYAL 387

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M +        T  S +  CA+   L +  +LH      G      +   L+  Y+K   
Sbjct: 388 MEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKI 447

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A ++F  M + KDV+SW++MI+G   N     A+ +F  M  + V+PN  T+   L 
Sbjct: 448 IEKAIEVFKYMPD-KDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALA 505

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A  A        ++HAH+++        V  ALL+ YVK G    A   F     KD+V+
Sbjct: 506 ACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVS 565

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ MLAG+   G  + A+  + ++   G  P+E TF +++  C+      +  + FH+ +
Sbjct: 566 WNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMT 625

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
            K  +   L   + +V + S+ G +        R     D   W +++ G   H
Sbjct: 626 EKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIH 679



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 244/521 (46%), Gaps = 45/521 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD     + + +N ++  +  +   +  L LFL +    +     T++SV    G L
Sbjct: 250 RKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLL 309

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  F +++H   VK GFA DV    SL+ +Y     + +   VF  M   + +SWT+++
Sbjct: 310 SDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMI 369

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +N   D+ LE++  M+V  + P+  T ++ L   A  G +   +++H +    G  
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFI 429

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NAL+ MY KSK++  A  VF  M D+D I+W+SM+AG+  N  + EA   F +M
Sbjct: 430 RYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM 489

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            LA  +    TF++ +  CA T  LR  +++H+ VL+ GI  +  +   L+  Y KCG+ 
Sbjct: 490 -LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQT 548

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A   F      KDVVSW  M++G + +G  D+A++FF +M   G  P+  T+      
Sbjct: 549 GYAWAQFG-AHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTF------ 601

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----DIVA 446
                                     ALL    + G++ +  ++F  + EK     ++  
Sbjct: 602 -------------------------VALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKH 636

Query: 447 WSAMLAGYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           ++ M+   +++G  TEG    Y  +    + P+   + +++N C      +E G+     
Sbjct: 637 YACMVDLLSRVGRLTEG----YNFINRMPITPDAAVWGALLNGCRI-HRNIELGELAAKI 691

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
            ++ + N+A      L  +Y+  G     S+V K  R + L
Sbjct: 692 VLELEPNDA-GYHVLLSDLYADAGMWAEVSKVRKTMRVKGL 731


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/848 (31%), Positives = 457/848 (53%), Gaps = 52/848 (6%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
            + LFD   +RN + +  L+  +  +   +E   L   +   G+      L ++L  C   
Sbjct: 285  KELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSR 344

Query: 89   GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD---DMNESNVV 145
            G L +  +    H   V  G  R+  V+T+L+ ++ R   V+  R +F+   D +   + 
Sbjct: 345  GVLDEDSW--MAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIE 402

Query: 146  SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
             W ++++ YA    +   L L   +Q++G+KPN  TF + LG  +    +     +H ++
Sbjct: 403  CWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDGRALHLLI 459

Query: 206  IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
             ++G +   SV NAL++MY K   + D+  +F  M ++D  +WNS +A +  +    E  
Sbjct: 460  HESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECI 519

Query: 266  ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
            +  + M   G    + TF++ +  C     L+    +H ++++ G + D  + + ++  Y
Sbjct: 520  KLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMY 579

Query: 326  SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
             +CG ++ A +IF+ ++   DV+ WT M++ + Q G     +  F  M  EG++P G T 
Sbjct: 580  GRCGGLDRAREIFTRVKTF-DVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTL 638

Query: 386  SIILT--AQPAVSPFQVHAHIIKTNYEKSFS----VGTALLNAYVKKGILDEAAKVFELI 439
              ++T  A   +  F+    I    +E        V  +L+  + +   L +A  +F+  
Sbjct: 639  VNLITCVADSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRN 698

Query: 440  DEKDIVAWSAMLAGYAQIGD--TEGAVKIYRQLTSEGVKPNEFTFSSVINACTA---PSA 494
             EK +   + MLA Y + G+   E A+ ++ ++  EG++P+  T  + ++AC     PS+
Sbjct: 699  PEKSVALHTTMLAAYVK-GERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSS 757

Query: 495  AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +    K+ H  + +  L +  CV++ LV MY K G++++A  +F R  +R++ +WN+M  
Sbjct: 758  S----KRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAG 813

Query: 555  GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
             Y Q G T+  L + + M+R     D +TF+ +++ C H+GL++E +  F  M  E  I 
Sbjct: 814  AYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGID 873

Query: 615  PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA--ASATVWRTVLAACRLIS--------- 663
            P+ +HYSC++DL +RAG L++A D I R+  +  AS+ +W  +L ACR +          
Sbjct: 874  PSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGNSSSRARRA 933

Query: 664  ---------LQP---HD-SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                     ++P   HD SA +V L+N+ AA+G+W E   +RK M ++ ++KE G S I 
Sbjct: 934  ARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIA 993

Query: 711  VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
            VKN+ + F+AGD  HP+  +IY++L  L   + D GY  DT  V  ++ +  K  +L  H
Sbjct: 994  VKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCH 1053

Query: 771  SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
            SE+LA+AFG+++TP G+ L+I+KNLR CGDCHT IKLIS +E R+IVVRD+NRFHHF+ G
Sbjct: 1054 SEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNG 1113

Query: 831  LCSCGDYW 838
             CSCGDYW
Sbjct: 1114 SCSCGDYW 1121



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 158/597 (26%), Positives = 299/597 (50%), Gaps = 28/597 (4%)

Query: 69  IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN-------VSTSLVD 121
           I R G+     + + +LK CG L D   G+++H +  +SG   D         +   LV 
Sbjct: 5   ISRSGVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQ 64

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +    ++ +R FD +   N+ SWTS+L  Y    ++ + LE FH+M   G++P+   
Sbjct: 65  MYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV 124

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNG-------GEVVTSVCNALISMYLKSKMVRDAR 234
           ++ +L      G +A   ++H  + ++G             + N L+ MY K     +A+
Sbjct: 125 YARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQ 184

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
             FD +  ++  +W S++  Y    LH +A E F+ M  AG E  R  F++ + +C   K
Sbjct: 185 RAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILK 244

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            L     +H Q+    +D D  I   L+  Y KCG+++ A ++F  + E ++V+SWT ++
Sbjct: 245 RLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCL-ERRNVISWTILV 303

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-----PFQVHAHIIKTNY 409
           S   +NG           M  EG++P+      +L    +        +  H +I+    
Sbjct: 304 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGL 363

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD---IVAWSAMLAGYAQIGDTEGAVKI 466
           ++   V TALL+ + + G +D+A ++FE + +     I  W+AM+  YA  G ++ A+ +
Sbjct: 364 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 423

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
              L  +GVKPN  TF S + AC+    +++ G+  H    ++  +  + V++ALVTMY 
Sbjct: 424 LDSLQLQGVKPNCITFISSLGACS----SLQDGRALHLLIHESGFDQEVSVANALVTMYG 479

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G++  ++++F    ++DL SWNS I  ++ HG + + +++  +MR +   ++ +TF+ 
Sbjct: 480 KCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLT 539

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            + +CT    + +G    + +V   +   T+   S ++++Y R G L++A +I  R+
Sbjct: 540 ALNSCTDPASLQDGVLMHEKIVQCGYEADTVV-ASAVINMYGRCGGLDRAREIFTRV 595



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 165/642 (25%), Positives = 313/642 (48%), Gaps = 20/642 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q  FD    +N   +  +L  Y    LH +AL  F  + + G+       + +LK CG L
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRL 135

Query: 92  FDHVFGRQVHCECVKSGFARDVN-------VSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
            D   G+++H +  +SG   D         +   LV +Y +    ++ +R FD +   N+
Sbjct: 136 GDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNI 195

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
            SWTS+L  Y    ++ + LE FH+M   G++P+   F   L V      +     +H  
Sbjct: 196 FSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQ 255

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           +     +    + NAL+SMY K   +  A+ +FD +E R+ I+W  +V+ +  N    E 
Sbjct: 256 IQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRET 315

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGLMV 323
           +    +M + G +  +   ++++ +C++   L     + H  ++  G+D +  + T L+ 
Sbjct: 316 WGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLS 375

Query: 324 AYSKCGKMEDASKIFSMMREMKDVV--SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
            +++CG+++ A +IF  + +    V   W AMI+ +   G    A+     +  +GV+PN
Sbjct: 376 MFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPN 435

Query: 382 GFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
             T+   +++  A S  Q    +H  I ++ +++  SV  AL+  Y K G L ++AK+F 
Sbjct: 436 CITF---ISSLGACSSLQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFS 492

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            + EKD+ +W++ +A ++  G ++  +K+  Q+  EG    + TF + +N+CT P A+++
Sbjct: 493 EMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDP-ASLQ 551

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G   H   ++        V+SA++ MY + G ++ A E+F R +  D++ W  M+  Y 
Sbjct: 552 DGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYC 611

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD-EGQQYFDIMVNEHHIYPT 616
           Q G TK+ +E F+ M  + L+  G+T + +IT    +GL       +   +  E  +   
Sbjct: 612 QLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESE 671

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
               + +++++S    L +A  I +R P   S  +  T+LAA
Sbjct: 672 TMVANSLIEMFSEFRSLSQARAIFDRNP-EKSVALHTTMLAA 712



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 171/644 (26%), Positives = 301/644 (46%), Gaps = 26/644 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q  FD    +N   +  +L  Y    LH +AL  F  + + G+        + L  CG L
Sbjct: 184 QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 243

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G  +H +        D+ +  +LV +Y +   ++  + +FD +   NV+SWT L+
Sbjct: 244 KRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILV 303

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV-ATAVQVHTMVIKNGG 210
           S +A N        L   M VEGIKP+     T+L V +  G++   +   H  ++  G 
Sbjct: 304 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGL 363

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT---WNSMVAGYVTNELHMEAFET 267
           +    V  AL+SM+ +   V  AR +F+ + D  +     WN+M+  Y       EA   
Sbjct: 364 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 423

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            +++ L G +    TF+S +  C++ ++    R LH  + ++G D + ++   L+  Y K
Sbjct: 424 LDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIHESGFDQEVSVANALVTMYGK 480

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG + D++K+FS M E KD+ SW + I+ H  +G  D  +    QM  EG      T+  
Sbjct: 481 CGSLLDSAKLFSEMAE-KDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLT 539

Query: 388 ILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            L +    +  Q    +H  I++  YE    V +A++N Y + G LD A ++F  +   D
Sbjct: 540 ALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFD 599

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA--VEQGKQ 501
           ++ W+ ML  Y Q+G T+  ++ +R +  EG+KP   T  ++I  C A S       G  
Sbjct: 600 VILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLIT-CVADSGLEHFRDGVW 658

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
             + + ++ L +   V+++L+ M+S+  ++  A  +F R  ++ +    +M+  Y +   
Sbjct: 659 ISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGER 718

Query: 562 TKK-ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
            K+ AL +F  M  + LE   +T +  ++AC   GL D         V+E      +E  
Sbjct: 719 GKEAALTLFARMLLEGLEPSSVTLVTAMSAC--GGLADPSSSK---RVHERARELGLESE 773

Query: 621 SC----MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
           +C    +VD+Y +AG ++ A  I +R     + T W  +  A R
Sbjct: 774 TCVANGLVDMYGKAGDVDTARYIFDR-ALRRNVTTWNAMAGAYR 816


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 225/574 (39%), Positives = 360/574 (62%), Gaps = 21/574 (3%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           + S+++ C + K L   +QLH+++ + GI ++ ++ T L+  YS C  + +A  +F  + 
Sbjct: 61  YASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIP 120

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
           +  ++  W  +I  +  NG  + A++ + QM   G++P+ FT   +L A  A+S      
Sbjct: 121 K-GNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGR 179

Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            +H  +I++ +E+   VG AL++ Y K G + +A  VF+ I ++D V W++MLA YAQ G
Sbjct: 180 VIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNG 239

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             + ++ +  ++ ++GV+P E T  +VI++ +A  A +  G++ H    +        V 
Sbjct: 240 HPDESLSLCCEMAAKGVRPTEATLVTVISS-SADIACLPHGREIHGFGWRHGFQYNDKVK 298

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +AL+ MY+K G+++ A  +F+R R++ +VSWN++I GYA HG   +AL++F+ M ++  +
Sbjct: 299 TALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKE-AQ 357

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D ITF+G + AC+   L+DEG+  +++MV +  I PT+EHY+CMVDL    G L++A D
Sbjct: 358 PDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYD 417

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           +I +M     + VW  +L +C+              LI L+P DS  YV+L+NMYA +G 
Sbjct: 418 LIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGK 477

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W+  AR+R+LM D+ +KK    SWIEVKNK Y+FL+GD+SHP S  IY++L+ L   +++
Sbjct: 478 WEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMRE 537

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
           AGY PDT  V  D++++ K  ++  HSERLAIAFGL++T  G  L I KNLR+C DCH  
Sbjct: 538 AGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVA 597

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           IK ISK+  R+I VRD NR+HHF+ GLCSCGDYW
Sbjct: 598 IKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 201/422 (47%), Gaps = 42/422 (9%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H    + G A +++++T LV+ Y   N++ +   +FD + + N+  W  L+  YA 
Sbjct: 77  GKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAW 136

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N  ++  + L+H+M   G+KP++FT   VL   +    +     +H  VI++G E    V
Sbjct: 137 NGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFV 196

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ MY K   V DAR VFD + DRD++ WNSM+A Y  N    E+      M   G 
Sbjct: 197 GAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGV 256

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
             T +T V+VI   A    L   R++H    ++G  ++  ++T L+  Y+KCG ++ A  
Sbjct: 257 RPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACV 316

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----- 391
           +F  +RE K VVSW A+I+G+  +G    A++ F +M +E  +P+  T+   L A     
Sbjct: 317 LFERLRE-KRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGR 374

Query: 392 ------------------QPAVSPF--------------QVHAHIIKTNYEKSFSVGTAL 419
                              P V  +              + +  I + +      V  AL
Sbjct: 375 LLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGAL 434

Query: 420 LNAYVKKGILDEAAKVFE-LID-EKDIVAWSAMLAG-YAQIGDTEGAVKIYRQLTSEGVK 476
           LN+    G ++ A    E LI+ E D      +LA  YAQ G  EG  ++ + +  +G+K
Sbjct: 435 LNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIK 494

Query: 477 PN 478
            N
Sbjct: 495 KN 496



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 175/347 (50%), Gaps = 7/347 (2%)

Query: 26  FYS-----KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYS     +    LFD+ P+ N   +N L+  Y  +  H+ A++L+  +   GL     T
Sbjct: 102 FYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFT 161

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L  VLK C  L     GR +H   ++SG+ RDV V  +LVD+Y +   V D R VFD + 
Sbjct: 162 LPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIV 221

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           + + V W S+L+ YA+N   D  L L   M  +G++P   T  TV+   AD   +    +
Sbjct: 222 DRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGRE 281

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H    ++G +    V  ALI MY K   V+ A  +F+ + ++  ++WN+++ GY  + L
Sbjct: 282 IHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGL 341

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRT 319
            +EA + F  M +  A+    TFV  +  C+  + L   R L++ ++++  I+      T
Sbjct: 342 AVEALDLFERM-MKEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYT 400

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            ++     CG++++A  +   M  M D   W A+++    +G ++LA
Sbjct: 401 CMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELA 447


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/704 (38%), Positives = 408/704 (57%), Gaps = 33/704 (4%)

Query: 151 LSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTF---STVLGVLADEGIVATAVQVHTMVI 206
           + G  R K  +   +LF  M  +  + P S+     S     LA++  +    +VH  VI
Sbjct: 1   MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVI 60

Query: 207 KNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
             G  + +  + N L++MY K   + DAR VF  M ++DS++WNSM+ G   N   +EA 
Sbjct: 61  TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAV 120

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E + +M          T +S +  CA+ K  +L +Q+H + LK GID + ++   LM  Y
Sbjct: 121 ERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLY 180

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL--AVNFFCQMTREGVRPNGF 383
           ++ G + +  KIFS M E  D VSW ++I G L +    L  AV  F    R G + N  
Sbjct: 181 AETGYLNECRKIFSSMPE-HDQVSWNSII-GALASSERSLPEAVACFLNALRAGQKLNRI 238

Query: 384 TYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T+S +L+A  ++S      Q+H   +K N     +   AL+  Y K G +D   K+F  +
Sbjct: 239 TFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRM 298

Query: 440 DEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
            E+ D V W++M++GY        A+ +   +   G + + F +++V++A  A  A +E+
Sbjct: 299 SERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA-FASVATLER 357

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G + HACS++A L + + V SALV MYSK G ++ A   F     R+  SWNSMI GYA+
Sbjct: 358 GMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR 417

Query: 559 HGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           HG  ++AL++F  M+       D +TF+GV++AC+HAGL++EG ++F+ M + + + P +
Sbjct: 418 HGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRI 477

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----------------RL 661
           EH+SCM DL  RAG L+K  D I++MP   +  +WRTVL AC                 L
Sbjct: 478 EHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEML 537

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L+P ++  YVLL NMYAA G W++  + RK M D  VKKEAGYSW+ +K+  + F+AG
Sbjct: 538 FQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAG 597

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP ++ IY KL+EL+ +++DAGY P T + L D++ E+KE ILS HSE+LA+AF L 
Sbjct: 598 DKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLA 657

Query: 782 ATPAGA-PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
           A  +   P++I+KNLRVCGDCH+  K ISK+E R I++RD+NR+
Sbjct: 658 AQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRY 701



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 240/465 (51%), Gaps = 8/465 (1%)

Query: 97  GRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           GR+VH   + +G     V +   LV++Y +  ++ D RRVF  M E + VSW S+++G  
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLD 111

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           +N      +E +  M+   I P SFT  + L   A         Q+H   +K G ++  S
Sbjct: 112 QNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 171

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM-EAFETFNNMGLA 274
           V NAL+++Y ++  + + R +F  M + D ++WNS++    ++E  + EA   F N   A
Sbjct: 172 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRA 231

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G +L R TF SV+   ++     L +Q+H   LK  I  +      L+  Y KCG+M+  
Sbjct: 232 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGC 291

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            KIFS M E +D V+W +MISG++ N  +  A++    M + G R + F Y+ +L+A  +
Sbjct: 292 EKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 351

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           V+      +VHA  ++   E    VG+AL++ Y K G LD A + F  +  ++  +W++M
Sbjct: 352 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 411

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++GYA+ G  E A+K++  +  +G   P+  TF  V++AC+      E  K F + S   
Sbjct: 412 ISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 471

Query: 510 KLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMI 553
            L   +   S +  +  + G ++   + + K   K +++ W +++
Sbjct: 472 GLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVL 516



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 249/557 (44%), Gaps = 57/557 (10%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           +++ V +N ++    ++    EA+  +  +RR  +     TL S L +C  L     G+Q
Sbjct: 97  EKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQ 156

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H E +K G   +V+VS +L+ LY  T  + + R++F  M E + VSW S++   A ++ 
Sbjct: 157 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSER 216

Query: 160 N-DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +    +  F      G K N  TFS+VL  ++         Q+H + +K       +  N
Sbjct: 217 SLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTEN 276

Query: 219 ALISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           ALI+ Y K   +     +F  M E RD +TWNSM++GY+ NEL  +A +    M   G  
Sbjct: 277 ALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQR 336

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L    + +V+   A+   L    ++H+  ++  ++ D  + + L+  YSKCG+++ A + 
Sbjct: 337 LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 396

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ M  +++  SW +MISG+ ++G  + A+  F  M  +G  P            P    
Sbjct: 397 FNTM-PVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTP------------PDHVT 443

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA-----WSAMLA 452
           F                    +L+A    G+L+E  K FE + +   +A     +S M  
Sbjct: 444 F------------------VGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMAD 485

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-APSAAVEQGKQFHACSIKAKL 511
              + G+ +   K+   +    VKPN   + +V+ AC  A     E GK+      + + 
Sbjct: 486 LLGRAGELD---KLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP 542

Query: 512 NNALCVSSALV-TMYSKKGNIESASEVFKRQRKRDL-----VSWNSM-------ICGYAQ 558
            NA  V+  L+  MY+  G  E   +  K+ +  D+      SW +M       + G   
Sbjct: 543 ENA--VNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKS 600

Query: 559 HGHTKKALEVFKEMRRQ 575
           H  T    +  KE+ R+
Sbjct: 601 HPDTDVIYKKLKELNRK 617



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 2/166 (1%)

Query: 32  QSLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +F R S +R+ V +N ++  Y  + L  +AL+L   + + G  L     ++VL     
Sbjct: 292 EKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 351

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +     G +VH   V++    DV V ++LVD+Y +   ++   R F+ M   N  SW S+
Sbjct: 352 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 411

Query: 151 LSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIV 195
           +SGYAR+   +  L+LF  M+++G   P+  TF  VL   +  G++
Sbjct: 412 ISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLL 457


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/647 (39%), Positives = 377/647 (58%), Gaps = 29/647 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LI+ Y K  ++  AR VFD +   D +++N+++A Y            F  +      
Sbjct: 79  NTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLG 138

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L   T   VI  C    ++ L RQLH  V+  G D   ++   ++  YS+ G + +A ++
Sbjct: 139 LDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRV 196

Query: 338 FSMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           F  M E   +D VSW AMI    Q+     AV  F +M R G++ + FT + +LTA   V
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCV 256

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAM 450
                  Q H  +IK+ +  +  VG+ L++ Y K  G + E  KVFE I   D+V W+ M
Sbjct: 257 KDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTM 316

Query: 451 LAGYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++G++   D +E  +  +R++   G +P++ +F  V +AC+  S+    GKQ HA +IK+
Sbjct: 317 ISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSP-SLGKQVHALAIKS 375

Query: 510 KLN-NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            +  N + V++ALV MYSK GN+  A  VF    + + VS NSMI GYAQHG   ++L +
Sbjct: 376 DVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRL 435

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M  +D+  + ITFI V++AC H G V+EGQ+YF++M     I P  EHYSCM+DL  
Sbjct: 436 FELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLG 495

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG L++A  II  MPF   +  W T+L ACR               + L+P+++A YV+
Sbjct: 496 RAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVM 555

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSNMYA+   W+E A V++LM +R VKK+ G SWIE+  K + F+A D SHP   +I+  
Sbjct: 556 LSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVY 615

Query: 735 LEELSTRLKDAGYKPDTSYVL---QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           + ++  ++K AGY PD  + L   ++++ + +E  L  HSE+LA+AFGL++T  G P+ +
Sbjct: 616 MGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILV 675

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VKNLR+CGDCH  +KLIS L  R+I VRDT+RFH FKEG CSC DYW
Sbjct: 676 VKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 237/475 (49%), Gaps = 28/475 (5%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +L++ Y + + +   RRVFD++ + ++VS+ +L++ YA        L LF  ++   +  
Sbjct: 80  TLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGL 139

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           + FT S V+    D+  V    Q+H  V+  G +   SV NA+++ Y +   + +AR VF
Sbjct: 140 DGFTLSGVITACGDD--VGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVF 197

Query: 238 DGMED---RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
             M +   RD ++WN+M+     +   MEA   F  M   G ++   T  SV+      K
Sbjct: 198 REMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVK 257

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKMEDASKIFSMMREMKDVVSWTAM 353
           +L   RQ H  ++K+G   + ++ +GL+  YSKC G M +  K+F  +    D+V W  M
Sbjct: 258 DLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEI-TAPDLVLWNTM 316

Query: 354 ISG-HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-----QPAVSPFQVHAHIIKT 407
           ISG  L     +  +  F +M R G RP+  ++  + +A      P++   QVHA  IK+
Sbjct: 317 ISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGK-QVHALAIKS 375

Query: 408 NYE-KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           +      SV  AL+  Y K G + +A +VF+ + E + V+ ++M+AGYAQ G    ++++
Sbjct: 376 DVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRL 435

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS------SA 520
           +  +  + + PN  TF +V++AC   +  VE+G+++        +    C+       S 
Sbjct: 436 FELMLEKDIAPNSITFIAVLSACVH-TGKVEEGQKYF-----NMMKERFCIEPEAEHYSC 489

Query: 521 LVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           ++ +  + G ++ A  + +        + W +++    +HG+ + A++   E  R
Sbjct: 490 MIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLR 544



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 215/447 (48%), Gaps = 17/447 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  PQ + V YN L+  Y         L LF  +R L L L G TLS V+  CG  
Sbjct: 95  RRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACG-- 152

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES---NVVSWT 148
            D    RQ+HC  V  G     +V+ +++  Y R   + + RRVF +M E    + VSW 
Sbjct: 153 DDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWN 212

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++    +++     + LF  M   G+K + FT ++VL        +    Q H M+IK+
Sbjct: 213 AMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKS 272

Query: 209 GGEVVTSVCNALISMYLK--SKMVRDARAVFDGMEDRDSITWNSMVAGY-VTNELHMEAF 265
           G    + V + LI +Y K    MV + R VF+ +   D + WN+M++G+ +  +L  +  
Sbjct: 273 GFHGNSHVGSGLIDLYSKCAGSMV-ECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGL 331

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVA 324
             F  M   G      +FV V   C+      L +Q+H+  +K+ + ++  ++   L+  
Sbjct: 332 WCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAM 391

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           YSKCG + DA ++F  M E  + VS  +MI+G+ Q+G    ++  F  M  + + PN  T
Sbjct: 392 YSKCGNVHDARRVFDTMPE-HNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSIT 450

Query: 385 YSIILTA---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           +  +L+A      V   Q + +++K  +  E      + +++   + G L EA ++ E +
Sbjct: 451 FIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETM 510

Query: 440 D-EKDIVAWSAMLAGYAQIGDTEGAVK 465
                 + W+ +L    + G+ E AVK
Sbjct: 511 PFNPGSIEWATLLGACRKHGNVELAVK 537



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 186/404 (46%), Gaps = 38/404 (9%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L   TF +++K C   ++L   + LH+   K+ I     +     + YSKCG + +A   
Sbjct: 7   LQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66

Query: 338 FSMMR------------------------------EMKDVVSWTAMISGHLQNGAIDLAV 367
           F + +                                 D+VS+  +I+ +   G     +
Sbjct: 67  FHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTL 126

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVK 425
             F ++    +  +GFT S ++TA         Q+H  ++   ++   SV  A+L  Y +
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSR 186

Query: 426 KGILDEAAKVFELIDE---KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           KG L EA +VF  + E   +D V+W+AM+    Q  +   AV ++R++   G+K + FT 
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTM 246

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK-KGNIESASEVFKRQ 541
           +SV+ A T     V  G+QFH   IK+  +    V S L+ +YSK  G++    +VF+  
Sbjct: 247 ASVLTAFTCVKDLV-GGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEI 305

Query: 542 RKRDLVSWNSMICGYAQHGH-TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              DLV WN+MI G++ +   ++  L  F+EM+R     D  +F+ V +AC++      G
Sbjct: 306 TAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLG 365

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           +Q   + +     Y  +   + +V +YS+ G +  A  + + MP
Sbjct: 366 KQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP 409



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 39/213 (18%)

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           TF +++ AC A    +  GK  HA   K+ +  +  +S+    +YSK G++ +A   F  
Sbjct: 11  TFRNLLKACIAQRDLI-TGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHL 69

Query: 541 QRKRDLVSWNSMICGYAQH-------------------------------GHTKKALEVF 569
            +  ++ S+N++I  YA+H                               G     L +F
Sbjct: 70  TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLF 129

Query: 570 KEMRRQDLEFDGITFIGVITAC-THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           +E+R   L  DG T  GVITAC    GLV   Q +  ++V  H  Y ++   + ++  YS
Sbjct: 130 EEVRELRLGLDGFTLSGVITACGDDVGLVR--QLHCFVVVCGHDCYASVN--NAVLACYS 185

Query: 629 RAGMLEKAMDIINRMPFAAS--ATVWRTVLAAC 659
           R G L +A  +   M          W  ++ AC
Sbjct: 186 RKGFLSEARRVFREMGEGGGRDEVSWNAMIVAC 218


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/691 (36%), Positives = 391/691 (56%), Gaps = 38/691 (5%)

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG---GEVVTSVCNALISMYLKSKMVRD 232
           +P+ FTF +++         A+A Q+H   ++ G     V TS   +L+  YL+   + +
Sbjct: 67  RPDGFTFPSLIRAAPSN---ASAAQLHACALRLGLVRPSVFTS--GSLVHAYLRFGRISE 121

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM---GLAGAELTRSTFVSVIKL 289
           A  VFD M +RD   WN+M++G   N    EA   F  M   G+AG  +T S   SV+ +
Sbjct: 122 AYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVS---SVLPM 178

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C    +  LA  +H   +K+G+D +  +   L+  Y K G +E+A  +F  M E +D+V+
Sbjct: 179 CVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGM-ECRDLVT 237

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SIILTAQPAVSPFQVHAHII 405
           W ++ISG  Q G    A+  F  M   GV P+  T     S I       S   +H +++
Sbjct: 238 WNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVM 297

Query: 406 KTNYE-KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +  ++      G A+++ Y K   ++ A ++F+ +  +D V+W+ ++ GY Q G    AV
Sbjct: 298 RRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAV 357

Query: 465 KIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           + Y  +   EG+K  + TF SV+ A +    A++QG + HA SIK  LN  + V + L+ 
Sbjct: 358 ERYGHMQKHEGLKAIQGTFVSVLPAYSH-LGALQQGMRMHALSIKIGLNVDVYVGTCLID 416

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           +Y+K G +  A  +F++  +R    WN++I G   HGH  +AL +F  M+++ ++ D +T
Sbjct: 417 LYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVT 476

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           F+ ++ AC+HAGLVD+G+ +FD+M   + I P  +HY+CM D+  RAG L++A + I  M
Sbjct: 477 FVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNM 536

Query: 644 PFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERA 689
           P    + VW  +L ACR              L  L P +   YVL+SNMYA  G W    
Sbjct: 537 PIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVD 596

Query: 690 RVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS--HPQSNQIYSKLEELSTRLKDAGY 747
            VR L+  + ++K  G+S IEVK     F +G+ +  HPQ  +I ++L  L  +++  GY
Sbjct: 597 EVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGY 656

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
             D S+VLQD++D+ KE IL+ HSERLAIAFG++ TP+  PL I KNLRVCGDCH   K 
Sbjct: 657 VSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKY 716

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           IS++  R+I+VRD+NRFHHFK+G CSCGD+W
Sbjct: 717 ISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 236/465 (50%), Gaps = 14/465 (3%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLF--GSTLSSVLKTCGCLFDHVFGRQVHCEC 104
           N L+  + R +L + A  L   I     P    G T  S+++       +    Q+H   
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAP---SNASAAQLHACA 93

Query: 105 VKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
           ++ G  R  V  S SLV  Y+R   + +  +VFD+M+E +V +W ++LSG  RN      
Sbjct: 94  LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           + LF RM  EG+  ++ T S+VL +    G    A+ +H   +K+G +    VCNALI +
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDV 213

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K  M+ +A+ VF GME RD +TWNS+++G         A + F  M  +G      T 
Sbjct: 214 YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTL 273

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIFSMMR 342
           VS+    A   + R A+ LH  V++ G D D  I    +V  Y+K   +E A ++F  M 
Sbjct: 274 VSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM- 332

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSPFQ-- 399
            ++D VSW  +I+G++QNG  + AV  +  M + EG++    T+  +L A   +   Q  
Sbjct: 333 PVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQG 392

Query: 400 --VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
             +HA  IK        VGT L++ Y K G L EA  +FE +  +    W+A+++G    
Sbjct: 393 MRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVH 452

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           G    A+ ++ ++  EG+KP+  TF S++ AC+  +  V+QG+ F
Sbjct: 453 GHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSH-AGLVDQGRSF 496



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 249/526 (47%), Gaps = 41/526 (7%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD   +R+   +N +L   CR++   EA+ LF  +   G+     T+SSVL  C  L D
Sbjct: 125 VFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGD 184

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            V    +H   VK G  +++ V  +L+D+Y +   +E+ + VF  M   ++V+W S++SG
Sbjct: 185 QVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISG 244

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
             +       L++F  M+  G+ P+  T  ++   +A  G   +A  +H  V++ G +V 
Sbjct: 245 CEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVD 304

Query: 214 TSVC-NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             +  NA++ MY K   +  A+ +FD M  +DS++WN+++ GY+ N L  EA E + +M 
Sbjct: 305 DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQ 364

Query: 273 L-AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +  + TFVSV+   +    L+   ++H+  +K G++ D  + T L+  Y+KCGK+
Sbjct: 365 KHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKL 424

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A  +F  M   +    W A+ISG   +G    A+  F +M +EG++P+  T+      
Sbjct: 425 AEAMLLFEKMPR-RSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTF------ 477

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAM 450
                                     +LL A    G++D+    F+++    DIV  +  
Sbjct: 478 -------------------------VSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKH 512

Query: 451 LAGYAQIGDTEGAV-KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            A  A +    G + + +  + +  +KP+   + +++ AC      VE GK       + 
Sbjct: 513 YACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRI-HGNVEMGKVASQNLFEL 571

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEV---FKRQRKRDLVSWNSM 552
              N +     +  MY+K G  +   EV    +RQ  +    W+S+
Sbjct: 572 DPEN-VGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 616


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/706 (35%), Positives = 389/706 (55%), Gaps = 20/706 (2%)

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           AL  +L +   G+     T   V+K C  L     G+ VH      G   DV V +SL+ 
Sbjct: 42  ALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIK 101

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           LY    ++ D + +FD++ + + V W  +L+GY +N  +   +++F  M+   IKPNS T
Sbjct: 102 LYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVT 161

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F+ VL V A E ++    Q+H + +  G E+ + V N L++MY K + ++ AR +FD + 
Sbjct: 162 FACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLP 221

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
             D ++WN +++GYV N L  EA   F  M  AG +    TF S +        L+  ++
Sbjct: 222 QSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKE 281

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H  ++++ +  D  +++ L+  Y KC  +E A K         D V  T MISG++ NG
Sbjct: 282 IHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSF-DTVVCTTMISGYVLNG 340

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGT 417
               A+  F  + +E ++P   T+S I  A   ++      ++H  IIKT  ++   VG+
Sbjct: 341 KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGS 400

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           A+L+ Y K G LD A +VF  I EKD + W++M+   +Q G    A+ ++RQ+  EG + 
Sbjct: 401 AILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           +  + S  ++AC A   A+  GK+ H   IK  L + L   S+L+ MY+K GN+  +  V
Sbjct: 461 DCVSISGALSAC-ANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRV 519

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           F R ++++ VSWNS+I  Y  HG  K+ L +F EM R  ++ D +TF+G+I+AC HAG V
Sbjct: 520 FDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQV 579

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           DEG +Y+ +M  E+ I   MEHY+C+ D++ RAG L +A + IN MPF   A VW T+L 
Sbjct: 580 DEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLG 639

Query: 658 AC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
           AC               L  L P +S  YVLL+N+ A  G W++  +VR +M +R V+K 
Sbjct: 640 ACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKV 699

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
            GYSWIEV N T+ F+A D SHP + QIYS L+ L   LK  GY P
Sbjct: 700 PGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVP 745



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 276/544 (50%), Gaps = 14/544 (2%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y+RT +++D + +F  +      +W  ++ G+      +  L  + +M   G+ P+ +T
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F  V+        V     VH  V   G +    V ++LI +Y ++  + DA+ +FD + 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +DS+ WN M+ GYV N     A + F  M  +  +    TF  V+ +CA+   L L  Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LH   +  G++ D  +   L+  YSKC  ++ A K+F  + +  D+VSW  +ISG++QNG
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQ-SDLVSWNGIISGYVQNG 239

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFS 414
            +  A + F  M   G++P+  T++  L   P V+         ++H +II+        
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFL---PCVNELLSLKHCKEIHGYIIRHAVVLDVF 296

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           + +AL++ Y K   ++ A K        D V  + M++GY   G  + A++ +R L  E 
Sbjct: 297 LKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +KP   TFSS+  A  A  AA+  GK+ H   IK KL+    V SA++ MY+K G ++ A
Sbjct: 357 MKPTSVTFSSIFPA-FAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLA 415

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
             VF R  ++D + WNSMI   +Q+G   +A+ +F++M  +   +D ++  G ++AC + 
Sbjct: 416 CRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANL 475

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
             +  G++   +M+ +  +   +   S ++D+Y++ G L  +  + +RM    +   W +
Sbjct: 476 PALHYGKEIHGLMI-KGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-EKNEVSWNS 533

Query: 655 VLAA 658
           +++A
Sbjct: 534 IISA 537



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 270/543 (49%), Gaps = 14/543 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD  PQ++ V +N +L  Y ++     A+ +FL +R   +     T + VL  C   
Sbjct: 113 QYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASE 172

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H   V  G   D  V+ +L+ +Y +   ++  R++FD + +S++VSW  ++
Sbjct: 173 AMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGII 232

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +N +      LF  M   GIKP+S TF++ L  + +   +    ++H  +I++   
Sbjct: 233 SGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVV 292

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   + +ALI +Y K + V  A+         D++   +M++GYV N  + EA E F  +
Sbjct: 293 LDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWL 352

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                + T  TF S+    A    L L ++LH  ++K  +D   ++ + ++  Y+KCG++
Sbjct: 353 VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRL 412

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A ++F+ + E KD + W +MI+   QNG    A+N F QM  EG R +  + S  L+A
Sbjct: 413 DLACRVFNRITE-KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSA 471

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       ++H  +IK          ++L++ Y K G L+ + +VF+ + EK+ V+W
Sbjct: 472 CANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSW 531

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS- 506
           +++++ Y   GD +  + ++ ++   G++P+  TF  +I+AC       E  + +H  + 
Sbjct: 532 NSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591

Query: 507 ---IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
              I A++ +  CV+     M+ + G +  A E         D   W +++     HG+ 
Sbjct: 592 EYGIPARMEHYACVAD----MFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNV 647

Query: 563 KKA 565
           + A
Sbjct: 648 ELA 650


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/657 (37%), Positives = 383/657 (58%), Gaps = 20/657 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  +I +     T + N L+   L  +  + +  +F   +  +   +NS++ G+V N 
Sbjct: 31  QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  E  + F ++   G  L   TF  V+K C      +L   LHS V+K G + D    T
Sbjct: 91  LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YS  G++ DA K+F  + + + VV+WTA+ SG+  +G    A++ F +M   GV+
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIK----TNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+ +    +L+A   V        I+K       +K+  V T L+N Y K G +++A  V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + EKDIV WS M+ GYA     +  ++++ Q+  E +KP++F+    +++C A   A
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSC-ASLGA 328

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++ G+   +   + +    L +++AL+ MY+K G +    EVFK  +++D+V  N+ I G
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            A++GH K +  VF +  +  +  DG TF+G++  C HAGL+ +G ++F+ +   + +  
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------------- 661
           T+EHY CMVDL+ RAGML+ A  +I  MP   +A VW  +L+ CRL              
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           I+L+P ++  YV LSN+Y+  G W E A VR +MN + +KK  GYSWIE++ K + FLA 
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP S++IY+KLE+L   ++  G+ P T +V  D+++E KE +L  HSE+LA+A GL+
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLI 628

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +T  G  +++VKNLRVCGDCH V+KLISK+ RR+IVVRD NRFH F  G CSC DYW
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 228/465 (49%), Gaps = 23/465 (4%)

Query: 23  RSPFYSKKDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           R+ F+ +   S  LF  +   N   YN L+  +  + L  E L+LFL IR+ GL L G T
Sbjct: 54  RTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFT 113

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
              VLK C        G  +H   VK GF  DV   TSL+ +Y  +  + D  ++FD++ 
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP 173

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           + +VV+WT+L SGY  +  +   ++LF +M   G+KP+S+    VL      G + +   
Sbjct: 174 DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW 233

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +   + +   +  + V   L+++Y K   +  AR+VFD M ++D +TW++M+ GY +N  
Sbjct: 234 IVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             E  E F  M     +  + + V  +  CA+   L L     S + ++    +  +   
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG M    ++F  M+E KD+V   A ISG  +NG + L+   F Q  + G+ P
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTN--YEKSFSVGTAL----------LNAYVKKGI 428
           +G T+  +L          VHA +I+    +  + S   AL          ++ + + G+
Sbjct: 413 DGSTFLGLLCG-------CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465

Query: 429 LDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
           LD+A ++  ++    + + W A+L+G   + DT+ A  + ++L +
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIA 510



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 118/493 (23%), Positives = 226/493 (45%), Gaps = 8/493 (1%)

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L +  C  +H+  +Q+H   +      D  +   L+   +     +    +F      N+
Sbjct: 19  LISVACTVNHL--KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNI 76

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
             + SL++G+  N +    L+LF  ++  G+  + FTF  VL            + +H++
Sbjct: 77  FLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           V+K G     +   +L+S+Y  S  + DA  +FD + DR  +TW ++ +GY T+  H EA
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            + F  M   G +      V V+  C    +L     +   + +  +  +  +RT L+  
Sbjct: 197 IDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL 256

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y+KCGKME A  +F  M E KD+V+W+ MI G+  N      +  F QM +E ++P+ F+
Sbjct: 257 YAKCGKMEKARSVFDSMVE-KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315

Query: 385 YSIILTAQPAVSPFQVH----AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
               L++  ++    +     + I +  +  +  +  AL++ Y K G +    +VF+ + 
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK 375

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           EKDIV  +A ++G A+ G  + +  ++ Q    G+ P+  TF  ++  C       +  +
Sbjct: 376 EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR 435

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQH 559
            F+A S    L   +     +V ++ + G ++ A  +      R + + W +++ G    
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLV 495

Query: 560 GHTKKALEVFKEM 572
             T+ A  V KE+
Sbjct: 496 KDTQLAETVLKEL 508


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/748 (33%), Positives = 403/748 (53%), Gaps = 95/748 (12%)

Query: 184 TVLGVL-----ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           T+LG+L          ++   Q H  ++K+G +    +   LI+ Y       DA  +  
Sbjct: 15  TILGILESSSSLWSSSLSKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQ 74

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            + D    +++S++      +L  ++   F+ M   G         ++ K+CA     + 
Sbjct: 75  SIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKA 134

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +Q+H     +G+D D  ++  L   Y +CG+M DA K+F  M E KDVV+ +A++ G+ 
Sbjct: 135 GKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSE-KDVVTCSALLCGYA 193

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQ------------ 399
           + G ++  V    +M + G+ PN  +++ IL+        + AV  FQ            
Sbjct: 194 RKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQV 253

Query: 400 --------------------VHAHIIKTNYEKSFSVGTALL------------------- 420
                               +H ++IK    K   V +A+L                   
Sbjct: 254 TVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEF 313

Query: 421 --------NAYV----KKGILDEAAKVFELIDEK----DIVAWSAMLAGYAQIGDTEGAV 464
                   NAY+    + G++D+A ++F L  E+    ++V+W++++AG AQ G    A+
Sbjct: 314 EMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEAL 373

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           +++R++   GVKPN  T  S++ AC    AA+  G+  H  +++  L + + V SAL+ M
Sbjct: 374 ELFREMQVAGVKPNRVTIPSMLPAC-GNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDM 432

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K G I+ +  VF     ++LV WNS++ GY+ HG  K+ + +F+ + R  L+ D I+F
Sbjct: 433 YAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISF 492

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             +++AC   GL DEG +YF++M  E+ I P +EHYSCMV+L  RAG L++A D+I  +P
Sbjct: 493 TSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIP 552

Query: 645 FAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERAR 690
           F   + VW  +L +CRL                L+P +   YVL+SN+YAA G W E   
Sbjct: 553 FEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDS 612

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           +R  M    +KK  G SWI+VKNK Y+ LA D SHPQ +QI  K++E+S  ++ +G++P+
Sbjct: 613 IRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPN 672

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
             + LQD++++ +E +L  HSE+LA+ FGL+ TP G PLQ++KNLR+CGDCH VIK IS 
Sbjct: 673 LDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISS 732

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              R+I +RDTNRFHHFK+G+CSCGD+W
Sbjct: 733 YAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/529 (23%), Positives = 229/529 (43%), Gaps = 74/529 (13%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q H   +KSG   D  +S  L+  Y   N   D   +   + +  V S++SL+    + K
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +  + + +F RM   G+ P++     +  V A+        Q+H +   +G ++   V  
Sbjct: 96  LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSIT------------------------------- 247
           +L  MY++   + DAR VFD M ++D +T                               
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215

Query: 248 ----WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
               WN +++G+  +  H EA   F  M   G    + T  SV+     ++ L + RQ+H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275

Query: 304 SQVLKNGIDFDHNI---------------------------RTGLMVAY----SKCGKME 332
             V+K G+  D  +                            TG+  AY    S+ G ++
Sbjct: 276 GYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVD 335

Query: 333 DASKIFSMMREMK---DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            A ++F + +E K   +VVSWT++I+G  QNG    A+  F +M   GV+PN  T   +L
Sbjct: 336 KALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSML 395

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   ++        H   ++ +      VG+AL++ Y K G +  +  VF ++  K++V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLV 455

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W++++ GY+  G  +  + I+  L    +KP+  +F+S+++AC       E  K F+  
Sbjct: 456 CWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMM 515

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMI 553
           S +  +   L   S +V +  + G ++ A ++ K    + D   W +++
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALL 564



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/544 (22%), Positives = 225/544 (41%), Gaps = 114/544 (20%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P      ++ L++   +  L  +++ +F  +   GL      L ++ K C  L     G+
Sbjct: 77  PDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGK 136

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE----------------- 141
           Q+HC    SG   D  V  SL  +YMR   + D R+VFD M+E                 
Sbjct: 137 QIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKG 196

Query: 142 ------------------SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
                              N+VSW  +LSG+ R+  +   + +F +M   G  P+  T S
Sbjct: 197 CLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVS 256

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNG------------------GEVV------------ 213
           +VL  + D   +    Q+H  VIK G                  G V             
Sbjct: 257 SVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMM 316

Query: 214 -TSVCNALISMYLKSKMVRDARAVFDGMEDR----DSITWNSMVAGYVTNELHMEAFETF 268
            T VCNA I+   ++ +V  A  +F   +++    + ++W S++AG   N   +EA E F
Sbjct: 317 ETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELF 376

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M +AG +  R T  S++  C     L   R  H   ++  +  D ++ + L+  Y+KC
Sbjct: 377 REMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKC 436

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G+++ +  +F+MM   K++V W ++++G+  +G     ++ F  + R  ++P+  ++   
Sbjct: 437 GRIKMSQIVFNMM-PTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISF--- 492

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----D 443
                                       T+LL+A  + G+ DE  K F ++ E+      
Sbjct: 493 ----------------------------TSLLSACGQVGLTDEGWKYFNMMSEEYGIKPR 524

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS----AAVEQG 499
           +  +S M+    + G  + A  + +++  E   P+   + +++N+C   +    A +   
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEIPFE---PDSCVWGALLNSCRLQNNVDLAEIAAQ 581

Query: 500 KQFH 503
           K FH
Sbjct: 582 KLFH 585


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 280/874 (32%), Positives = 444/874 (50%), Gaps = 131/874 (14%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF-DDM 139
           L+  L++CG        R +H   +  G A  V +  +L+  Y+    + D R +  D++
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK----------------------- 176
            E NV++   +++GYA+       +ELF RM    +                        
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147

Query: 177 ---------PNSFTFSTV----------------LGVLA-----DEGIVATAVQVHTMVI 206
                    PN+FTF  V                LG+L+     D+  V TA+    M++
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALV--DMLV 205

Query: 207 KNGG-----------EVVTSVC-NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           + G            +  T +C N+++  Y KS  V  A  +F  M +RD ++WN +++ 
Sbjct: 206 RCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISA 265

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
              +    EA +   +M   G     +T+ S +  CA    L   +QLH QV++N    D
Sbjct: 266 LSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHID 325

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             + + ++  Y+KCG  ++A ++FS +R+ ++ VSWT +I G LQ G    +V  F QM 
Sbjct: 326 PYVASAMVELYAKCGCFKEAKRVFSSLRD-RNSVSWTVLIGGFLQYGCFSESVELFNQMR 384

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
            E +  + F  + +++            Q+H+  +K+ + ++  V  +L++ Y K G L 
Sbjct: 385 AELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQ 444

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDT------------------------------ 460
            A  +F  + E+DIV+W+ M+  Y+Q+G+                               
Sbjct: 445 NAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGA 504

Query: 461 -EGAVKIYRQ-LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            E  +K+Y   LT + V P+  T+ ++   C A   A + G Q    ++K  L     V 
Sbjct: 505 EEDGLKMYSDMLTEKDVIPDWVTYVTLFRGC-ADIGANKLGDQIIGHTVKVGLILDTSVV 563

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +A++TMYSK G I  A + F    ++DLVSWN+MI GY+QHG  K+A+E+F ++  +  +
Sbjct: 564 NAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAK 623

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D I+++ V++ C+H+GLV+EG+ YFD+M  +H+I P +EH+SCMVDL  RAG L +A +
Sbjct: 624 PDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKN 683

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           +I+ MP   +A VW  +L+AC+              L  L    S  Y+LL+ MYA  G 
Sbjct: 684 LIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGK 743

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
             + A+VRKLM D+ +KK  GYSW+EV N+ + F A D+SHPQ   I  KL+EL  ++  
Sbjct: 744 SDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAH 803

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            GY          +  E   + +  HSE+LA+AFG+++ PA  P+ I+KNLR+C DCHTV
Sbjct: 804 LGY----------VRTESPRSEI-HHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTV 852

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           IKLIS +  R+ V+RD  RFHHFK G CSC DYW
Sbjct: 853 IKLISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 279/602 (46%), Gaps = 72/602 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGCLF 92
           LF R P R+   +N ++  Y +      AL++F+ +R+ G  L  + T   V+K+CG L 
Sbjct: 114 LFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALG 173

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDL------------------------------ 122
            H    Q+     K     D +V T+LVD+                              
Sbjct: 174 WHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLV 233

Query: 123 -YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
            Y +++ V+    +F  M E +VVSW  ++S  +++      L++   M  +G++P+S T
Sbjct: 234 GYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTT 293

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +++ L   A    +    Q+H  VI+N   +   V +A++ +Y K    ++A+ VF  + 
Sbjct: 294 YTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLR 353

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           DR+S++W  ++ G++      E+ E FN M      + +    ++I  C  T ++ L  Q
Sbjct: 354 DRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQ 413

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           LHS  LK+G      +   L+  Y+KCG +++A  IF+ M E +D+VSWT MI+ + Q G
Sbjct: 414 LHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAE-RDIVSWTGMITAYSQVG 472

Query: 362 AIDLAVNFFCQMT---------------REGVRPNGF-TYSIILTAQPAVSPF------- 398
            I  A  FF  M+               + G   +G   YS +LT +  +  +       
Sbjct: 473 NIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLF 532

Query: 399 -------------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
                        Q+  H +K       SV  A++  Y K G + EA K F+ +  KD+V
Sbjct: 533 RGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLV 592

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK-QFHA 504
           +W+AM+ GY+Q G  + A++I+  + ++G KP+  ++ +V++ C+  S  VE+GK  F  
Sbjct: 593 SWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCS-HSGLVEEGKFYFDM 651

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGN-IESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
                 ++  L   S +V +  + G+ IE+ + + +   K     W +++     HG+  
Sbjct: 652 MKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNND 711

Query: 564 KA 565
            A
Sbjct: 712 LA 713



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 174/382 (45%), Gaps = 55/382 (14%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F     RN V +  L+  + +     E++ LF  +R   + +    L++++  C
Sbjct: 343 KEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGC 402

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   G Q+H  C+KSG  R V VS SL+ +Y +  N+++   +F+ M E ++VSWT
Sbjct: 403 CNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWT 462

Query: 149 SLLSGYARNKMNDRVLELF--------------------HRMQVEGIK------------ 176
            +++ Y++     +  E F                    H  + +G+K            
Sbjct: 463 GMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVI 522

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+ T+    AD G      Q+    +K G  + TSV NA+I+MY K   + +AR  
Sbjct: 523 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKA 582

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  +D ++WN+M+ GY  + +  +A E F+++   GA+    ++V+V+  C+     
Sbjct: 583 FDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCS----- 637

Query: 297 RLARQLHSQVLKNG------IDFDHNIRTGL-----MV-AYSKCGKMEDASKIFSMMREM 344
                 HS +++ G      +  DHNI  GL     MV    + G + +A  +   M   
Sbjct: 638 ------HSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMK 691

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
                W A++S    +G  DLA
Sbjct: 692 PTAEVWGALLSACKTHGNNDLA 713


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/727 (33%), Positives = 392/727 (53%), Gaps = 90/727 (12%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q H  ++K+G +    +   LI+ Y       DA  V   + D    +++S++      +
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  ++   F+ M   G         ++ K+CA     ++ +Q+H     +G+D D  ++ 
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            +   Y +CG+M DA K+F  M + KDVV+ +A++  + + G ++  V    +M   G+ 
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSD-KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214

Query: 380 PNGFTYSIILTA-------QPAVSPFQ--------------------------------V 400
            N  +++ IL+        + AV  FQ                                +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274

Query: 401 HAHIIKTNYEKSFSVGTALL---------------------------NAYV----KKGIL 429
           H ++IK    K   V +A++                           NAY+    + G++
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334

Query: 430 DEAAKVFELIDEK----DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
           D+A ++FEL  E+    ++V+W++++AG AQ G    A++++R++   GVKPN  T  S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + AC    AA+  G+  H  +++  L + + V SAL+ MY+K G I  +  VF     ++
Sbjct: 395 LPAC-GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           LV WNS++ G++ HG  K+ + +F+ + R  L+ D I+F  +++AC   GL DEG +YF 
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL---- 661
           +M  E+ I P +EHYSCMV+L  RAG L++A D+I  MPF   + VW  +L +CRL    
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573

Query: 662 ----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                       L+P +   YVLLSN+YAA G W E   +R  M    +KK  G SWI+V
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           KN+ Y+ LAGD SHPQ +QI  K++E+S  ++ +G++P+  + L D++++ +E +L  HS
Sbjct: 634 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHS 693

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+LA+ FGL+ TP G PLQ++KNLR+CGDCH VIK IS    R+I +RDTNRFHHFK+G+
Sbjct: 694 EKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGI 753

Query: 832 CSCGDYW 838
           CSCGD+W
Sbjct: 754 CSCGDFW 760



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 120/532 (22%), Positives = 231/532 (43%), Gaps = 80/532 (15%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q H   +KSG   D  +S  L+  Y   N   D   V   + +  + S++SL+    + K
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +  + + +F RM   G+ P+S     +  V A+        Q+H +   +G ++   V  
Sbjct: 96  LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSIT------------------------------- 247
           ++  MY++   + DAR VFD M D+D +T                               
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 248 ----WNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
               WN +++G+  +  H EA   F+  +++G    ++T S   SV+     ++ L + R
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS---SVLPSVGDSEMLNMGR 272

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGK------------------------------ 330
            +H  V+K G+  D  + + ++  Y K G                               
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332

Query: 331 -MEDASKIFSMMREMK---DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
            ++ A ++F + +E     +VVSWT++I+G  QNG    A+  F +M   GV+PN  T  
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L A   ++        H   ++ +   +  VG+AL++ Y K G ++ +  VF ++  K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           ++V W++++ G++  G  +  + I+  L    +KP+  +F+S+++AC       E  K F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
              S +  +   L   S +V +  + G ++ A ++ K    + D   W +++
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 137/635 (21%), Positives = 256/635 (40%), Gaps = 130/635 (20%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P      ++ L++   +  L  +++ +F  +   GL      L ++ K C  L     G+
Sbjct: 77  PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGK 136

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN------------------ 140
           Q+HC    SG   D  V  S+  +YMR   + D R+VFD M+                  
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG 196

Query: 141 -----------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
                            E+N+VSW  +LSG+ R+  +   + +F ++   G  P+  T S
Sbjct: 197 CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS 256

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF------ 237
           +VL  + D  ++     +H  VIK G      V +A+I MY KS  V    ++F      
Sbjct: 257 SVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMM 316

Query: 238 --------------DGMEDR---------------DSITWNSMVAGYVTNELHMEAFETF 268
                         +G+ D+               + ++W S++AG   N   +EA E F
Sbjct: 317 EAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELF 376

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M +AG +    T  S++  C     L   R  H   ++  +  + ++ + L+  Y+KC
Sbjct: 377 REMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC 436

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G++  +  +F+MM   K++V W ++++G   +G     ++ F  + R  ++P+  ++   
Sbjct: 437 GRINLSQIVFNMM-PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF--- 492

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----D 443
                                       T+LL+A  + G+ DE  K F+++ E+      
Sbjct: 493 ----------------------------TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR 524

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS----AAVEQG 499
           +  +S M+    + G  + A  + +++  E   P+   + +++N+C   +    A +   
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWGALLNSCRLQNNVDLAEIAAE 581

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW-------NSM 552
           K FH           L    A   M+++  +I +  E     +K    SW        ++
Sbjct: 582 KLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGL-KKNPGCSWIQVKNRVYTL 640

Query: 553 ICGYAQHGH----TKKALEVFKEMR----RQDLEF 579
           + G   H      T+K  E+ KEMR    R +L+F
Sbjct: 641 LAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDF 675



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 5/163 (3%)

Query: 36  DRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV 95
           +++ + N V +  ++    ++    EAL LF  ++  G+     T+ S+L  CG +    
Sbjct: 346 EQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALG 405

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            GR  H   V+     +V+V ++L+D+Y +   +   + VF+ M   N+V W SL++G++
Sbjct: 406 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFS 465

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV-----LADEG 193
            +     V+ +F  +    +KP+  +F+++L       L DEG
Sbjct: 466 MHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 286/873 (32%), Positives = 439/873 (50%), Gaps = 127/873 (14%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV---- 135
            L+  L++CG        R +H   V  G A  V +  +L+  Y     + D RR+    
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 136 ----------------------------FDDMNESNVVSWTSLLSGYARNKMNDRVLELF 167
                                       FD M   +V SW +L+SGY + +     LE F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 168 HRMQVEGIK-PNSFTFSTVLGVLADEGIVATAVQ---------------VHT----MVIK 207
             M   G   PN+FTF  V+      G    A Q               V T    M ++
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 208 NGG-----------EVVTSVC-NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
            G            E  T  C N++++ Y K   +  A   F+ M +RD ++WN M+A  
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
             +    EA      M   G  L  +T+ S +  CA    L   +QLH++V+++    D 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y+KCG  ++A ++F+ +++ ++ VSWT +I G LQ      +V  F QM  
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQD-RNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 376 EGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           E +  + F  + +++            Q+H+  +K+ + ++  V  +L++ Y K G L  
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIG------------DTEGAV--------------- 464
           A  VF  + E+DIV+W++M+  Y+QIG            DT  A+               
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAE 484

Query: 465 ----KIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
               K+Y  + S+  V P+  T+ ++   C A   A + G Q    ++KA L   + V++
Sbjct: 485 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGC-ADIGANKLGDQIIGHTVKAGLILNVSVAN 543

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           A +TMYSK G I  A ++F     +D+VSWN+MI GY+QHG  K+A + F +M  +  + 
Sbjct: 544 AAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKP 603

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           D I+++ V++ C+H+GLV EG+ YFD+M   H I P +EH+SCMVDL  RAG L +A D+
Sbjct: 604 DYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDL 663

Query: 640 INRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHW 685
           I++MP   +A VW  +L+AC++                L   DS  Y+LL+ +Y+  G  
Sbjct: 664 IDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKS 723

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
            + A+VRKLM D+ +KK  GYSW+EV+NK + F A D+SHPQ   I +KL+EL  ++   
Sbjct: 724 DDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHL 783

Query: 746 GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVI 805
           GY          +  E   + +  HSE+LA+AFG+++ PA  P+ I+KNLR+CGDCHTVI
Sbjct: 784 GY----------VRTESPRSEI-HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVI 832

Query: 806 KLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KLIS +  R+ V+RD  RFHHFK G CSCGDYW
Sbjct: 833 KLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 299/646 (46%), Gaps = 73/646 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           + LFDR P+R+   +N L+  Y +     + L  F+ + R G  L  + T   V+K+CG 
Sbjct: 91  EELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGA 150

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV--------------- 135
           L       Q+     K  F  D +V T+LVD+++R   V+   R+               
Sbjct: 151 LGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSM 210

Query: 136 ----------------FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
                           F+DM E +VVSW  +++  +++      L L   M  +G++ +S
Sbjct: 211 LAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDS 270

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            T+++ L   A    +    Q+H  VI++  ++   V +ALI +Y K    ++A+ VF+ 
Sbjct: 271 TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNS 330

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           ++DR+S++W  ++ G +  E   ++ E FN M      + +    ++I  C    +L L 
Sbjct: 331 LQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 390

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           RQLHS  LK+G +    +   L+  Y+KCG +++A  +FS M E +D+VSWT+MI+ + Q
Sbjct: 391 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE-RDIVSWTSMITAYSQ 449

Query: 360 NGAIDLAVNFFCQM---------------TREGVRPNGFTYSIILTAQPAVSP------- 397
            G I  A  FF  M                + G   +G      + +Q  V+P       
Sbjct: 450 IGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509

Query: 398 --------------FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
                          Q+  H +K     + SV  A +  Y K G + EA K+F+L++ KD
Sbjct: 510 LFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKD 569

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+AM+ GY+Q G  + A K +  + S+G KP+  ++ +V++ C+  S  V++GK + 
Sbjct: 570 VVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS-HSGLVQEGKLYF 628

Query: 504 ACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGH 561
               +   ++  L   S +V +  + G++  A ++  +   +     W +++     HG+
Sbjct: 629 DMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN 688

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
            + A    K +   D   D  +++ +    + AG  D+  Q   +M
Sbjct: 689 DELAELAAKHVFELDSP-DSGSYMLLAKIYSDAGKSDDSAQVRKLM 733



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 176/382 (46%), Gaps = 55/382 (14%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F+    RN V +  L+    +     +++ LF  +R   + +    L++++  C
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   GRQ+H  C+KSG  R + VS SL+ LY +  ++++   VF  M+E ++VSWT
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 441

Query: 149 SLLSGYARNKMNDRVLELF--------------------HRMQVEGIK------------ 176
           S+++ Y++     +  E F                    H  + +G+K            
Sbjct: 442 SMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 501

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+ T+    AD G      Q+    +K G  +  SV NA I+MY K   + +A+ +
Sbjct: 502 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  +D ++WN+M+ GY  + +  +A +TF++M   GA+    ++V+V+  C+     
Sbjct: 562 FDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS----- 616

Query: 297 RLARQLHSQVLKNG-IDFD-----HNIRTGL-----MV-AYSKCGKMEDASKIFSMMREM 344
                 HS +++ G + FD     H I  GL     MV    + G + +A  +   M   
Sbjct: 617 ------HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMK 670

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
                W A++S    +G  +LA
Sbjct: 671 PTAEVWGALLSACKIHGNDELA 692


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 283/873 (32%), Positives = 439/873 (50%), Gaps = 127/873 (14%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV---- 135
            L+  L++CG        R +H   V  G A  V +  +L+  Y+    + D RR+    
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 136 ----------------------------FDDMNESNVVSWTSLLSGYARNKMNDRVLELF 167
                                       FD M   +V SW +L+SGY + +     LE F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 168 HRMQVEGIK-PNSFTFSTVLGVLADEGIVATAVQ---------------VHT----MVIK 207
             M   G   PN+FTF  V+      G    A Q               V T    M ++
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 208 NGG-----------EVVTSVC-NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
            G            E  T  C N++++ Y K   +  A   F+ M +RD ++WN M+A  
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
             +    EA      M   G  L  +T+ S +  CA    L   +QLH++V+++    D 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y+KCG  ++A ++F+ +++ ++ VSWT +I G LQ      +V  F QM  
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQD-RNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 376 EGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           E +  + F  + +++            Q+H+  +K+ + ++  V  +L++ Y K G L  
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDT------------------------------- 460
           A  VF  + E+DIV+W++M+  Y+QIG+                                
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAE 484

Query: 461 EGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
           E  +K+Y  + S+  V P+  T+ ++   C A   A + G Q    ++KA L   + V++
Sbjct: 485 EDGLKMYSAMLSQKDVTPDWVTYVTLFRGC-ADIGANKLGDQIIGHTVKAGLILNVSVAN 543

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           A +TMYSK G I  A ++F     +D+VSWN+MI GY+QHG  K+A + F +M  +  + 
Sbjct: 544 AAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKP 603

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           D I+++ V++ C+H+GLV EG+ YFD+M   H I P +EH+SCMVDL  RAG L +A D+
Sbjct: 604 DYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDL 663

Query: 640 INRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHW 685
           I++MP   +A VW  +L+AC++                L   DS  Y+LL+ +Y+  G  
Sbjct: 664 IDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKS 723

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
            + A+VRKLM D+ +KK  GYSW+EV+NK + F A D+SHPQ   I +K++EL  ++   
Sbjct: 724 DDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHL 783

Query: 746 GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVI 805
           GY          +  E   + +  HSE+LA+AFG+++ PA  P+ I+KNLR+CGDCHTVI
Sbjct: 784 GY----------VRTESPRSEI-HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVI 832

Query: 806 KLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KLIS +  R+ V+RD  RFHHFK G CSCGDYW
Sbjct: 833 KLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 299/646 (46%), Gaps = 73/646 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           + LFDR P+R+   +N L+  Y +     + L  F+ + R G  L  + T   V+K+CG 
Sbjct: 91  EELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGA 150

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV--------------- 135
           L       Q+     K  F  D +V T+LVD+++R   V+   R+               
Sbjct: 151 LGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSM 210

Query: 136 ----------------FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
                           F+DM E +VVSW  +++  +++      L L   M  +G++ +S
Sbjct: 211 LAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDS 270

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            T+++ L   A    +    Q+H  VI++  ++   V +ALI +Y K    ++A+ VF+ 
Sbjct: 271 TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNS 330

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           ++DR+S++W  ++ G +  E   ++ E FN M      + +    ++I  C    +L L 
Sbjct: 331 LQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 390

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           RQLHS  LK+G +    +   L+  Y+KCG +++A  +FS M E +D+VSWT+MI+ + Q
Sbjct: 391 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE-RDIVSWTSMITAYSQ 449

Query: 360 NGAIDLAVNFFCQMT---------------REGVRPNGFTYSIILTAQPAVSP------- 397
            G I  A  FF  M                + G   +G      + +Q  V+P       
Sbjct: 450 IGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVT 509

Query: 398 --------------FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
                          Q+  H +K     + SV  A +  Y K G + EA K+F+L++ KD
Sbjct: 510 LFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKD 569

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+AM+ GY+Q G  + A K +  + S+G KP+  ++ +V++ C+  S  V++GK + 
Sbjct: 570 VVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS-HSGLVQEGKLYF 628

Query: 504 ACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGH 561
               +   ++  L   S +V +  + G++  A ++  +   +     W +++     HG+
Sbjct: 629 DMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGN 688

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
            + A    K +   D    G +++ +    + AG  D+  Q   +M
Sbjct: 689 DELAELAAKHVFELDSPDSG-SYMLLAKIYSDAGKSDDSAQVRKLM 733



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 176/382 (46%), Gaps = 55/382 (14%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F+    RN V +  L+    +     +++ LF  +R   + +    L++++  C
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   GRQ+H  C+KSG  R + VS SL+ LY +  ++++   VF  M+E ++VSWT
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 441

Query: 149 SLLSGYARNKMNDRVLELF--------------------HRMQVEGIK------------ 176
           S+++ Y++     +  E F                    H  + +G+K            
Sbjct: 442 SMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 501

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+ T+    AD G      Q+    +K G  +  SV NA I+MY K   + +A+ +
Sbjct: 502 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  +D ++WN+M+ GY  + +  +A +TF++M   GA+    ++V+V+  C+     
Sbjct: 562 FDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS----- 616

Query: 297 RLARQLHSQVLKNG-IDFD-----HNIRTGL-----MV-AYSKCGKMEDASKIFSMMREM 344
                 HS +++ G + FD     H I  GL     MV    + G + +A  +   M   
Sbjct: 617 ------HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMK 670

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
                W A++S    +G  +LA
Sbjct: 671 PTAEVWGALLSACKIHGNDELA 692


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/731 (34%), Positives = 393/731 (53%), Gaps = 70/731 (9%)

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           R  N+E  R  F+ M      S+ +LL+GY RN++ D  L LF RM    +         
Sbjct: 29  RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL--------- 79

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS-MYLKSKMVRDARAVFDGMEDR 243
                                         +  NALIS + L+ + + DA A    +   
Sbjct: 80  ------------------------------ASYNALISGLSLRRQTLPDAAAALASIPFP 109

Query: 244 DSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
            S+ ++ S++ GYV + L  +A   F  M     E    ++  ++        +  AR+L
Sbjct: 110 PSVVSFTSLLRGYVRHGLLADAIRLFQQM----PERNHVSYTVLLGGLLDAGRVNEARRL 165

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
             ++     D D    T ++  Y + G++ +A  +F  M + ++VVSWTAMISG+ QNG 
Sbjct: 166 FDEM----PDRDVVAWTAMLSGYCQAGRITEARALFDEMPK-RNVVSWTAMISGYAQNGE 220

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNA 422
           ++LA   F  M       N  +++ +L         +  A +     E   +   A++  
Sbjct: 221 VNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG 276

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           + ++G++D A  VFE + E+D   WSAM+  Y Q      A+  +R++   GV+PN  + 
Sbjct: 277 FGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            S++  C A  A ++ G++ HA  ++   +  +   SAL+TMY K GN++ A  VF    
Sbjct: 337 ISILTVCAA-LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D+V WNSMI GYAQHG  ++AL +F +MR   +  DGIT+IG +TAC++ G V EG++
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-- 660
            F+ M     I P  EHYSCMVDL  R+G++E+A D+I  MP    A +W  ++ ACR  
Sbjct: 456 IFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515

Query: 661 ------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                       L+ L+P ++  YVLLS++Y + G W++ +++RK ++ R + K  G SW
Sbjct: 516 RNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSW 575

Query: 709 IEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           IE   + + F +GD+ +HP+   I   LE+L   L ++GY  D S+VL DID+E K   L
Sbjct: 576 IEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSL 635

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
             HSER A+A+GL+  P G P++++KNLRVCGDCH+ IKLI+K+  R+IV+RD NRFHHF
Sbjct: 636 RYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHF 695

Query: 828 KEGLCSCGDYW 838
           K+G CSC DYW
Sbjct: 696 KDGFCSCRDYW 706



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 213/487 (43%), Gaps = 77/487 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-----------------LGIRRLGL 74
           ++ F+  P R    YN LL  Y R+ L   AL LF                 L +RR  L
Sbjct: 37  RAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL 96

Query: 75  PLFGSTLSSV---------------------LKTCGCLFDHVFGR-QVHCECVKSGFA-- 110
           P   + L+S+                     L     LF  +  R  V    +  G    
Sbjct: 97  PDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDA 156

Query: 111 ---------------RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
                          RDV   T+++  Y +   + + R +FD+M + NVVSWT+++SGYA
Sbjct: 157 GRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYA 216

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           +N   +   +LF  M     + N  +++ +L      G V  A ++   +     E   +
Sbjct: 217 QNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQAGHVEDAAELFNAM----PEHPVA 268

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
            CNA++  + +  MV  A+ VF+ M +RD  TW++M+  Y  NE  MEA  TF  M   G
Sbjct: 269 ACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRG 328

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 + +S++ +CA    L   R++H+ +L+   D D    + L+  Y KCG ++ A 
Sbjct: 329 VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK 388

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F    E KD+V W +MI+G+ Q+G  + A+  F  M   G+ P+G TY   LTA    
Sbjct: 389 RVFHTF-EPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYT 447

Query: 396 SPFQVHAHIIKT-NYEKSFSVG----TALLNAYVKKGILDEAAKVFELID----EKDIVA 446
              +    I  +     S   G    + +++   + G+++EA   F+LI     E D V 
Sbjct: 448 GKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEA---FDLIKNMPVEPDAVI 504

Query: 447 WSAMLAG 453
           W A++  
Sbjct: 505 WGALMGA 511



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 11/128 (8%)

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +A +   ++ GNIE A   F+    R   S+N+++ GY ++     AL +F+ M  +DL 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI--YPTMEHYSCMVDLYSRAGMLEKA 636
               ++  +I+     GL    Q   D       I   P++  ++ ++  Y R G+L  A
Sbjct: 81  ----SYNALIS-----GLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADA 131

Query: 637 MDIINRMP 644
           + +  +MP
Sbjct: 132 IRLFQQMP 139


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/636 (36%), Positives = 382/636 (60%), Gaps = 30/636 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NA++S Y ++  V++A+ +FD M  ++SI+WN M+A YV N    +A   F         
Sbjct: 65  NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE-------- 116

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA-YSKCGKMEDASK 336
            +++ +  +   C     ++  R + ++ + + +     +    M++ Y++ G++ +A +
Sbjct: 117 -SKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQR 175

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F     ++DV +WTAM+SG++QNG +D A   F  M  +    N  +++ I+       
Sbjct: 176 LFEE-SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCK 230

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
                  + +    ++ S    ++  Y + G + +A   F+ + ++D ++W+A++AGYAQ
Sbjct: 231 RMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQ 290

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G  E A+ ++ ++  +G + N  TF+S ++ C A  AA+E GKQ H   +KA L +   
Sbjct: 291 SGYGEEALHLFVEMKRDGERLNRSTFTSTLSTC-AEIAALELGKQVHGRVVKAGLESGCY 349

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V +AL+ MY K GNI+ A  VF+   ++++VSWN+MI GYA+HG  K+AL +F+ M++  
Sbjct: 350 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG 409

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +  D +T +GV++AC+H GLVD+G +YF  M  ++ I    +HY+CM+DL  RAG L+ A
Sbjct: 410 ILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDA 469

Query: 637 MDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAAT 682
            +++  MPF   A  W  +L A R+                ++P +S +YVLLSN+YAA+
Sbjct: 470 QNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAAS 529

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G W +  R+R  M DR VKK  GYSW+EV+NK ++F  GD  HP+ ++IY+ LEEL  ++
Sbjct: 530 GRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKM 589

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           K  GY   T  VL D+++E K  +L  HSE+LA+AFG++A PAG P++++KNLRVC DCH
Sbjct: 590 KKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCH 649

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             +K ISK+  R I++RD++RFHHF  G CSCGDYW
Sbjct: 650 NAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 233/493 (47%), Gaps = 66/493 (13%)

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
           +R  N+   R +FD M E +VVSW ++LSGYA+N       E+F  M  +    NS +++
Sbjct: 41  VRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWN 96

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
            +L      G +  A ++     K   E+++  C  ++  Y+K   + DAR +FD M +R
Sbjct: 97  GMLAAYVQNGRIEDARRLFES--KADWELISWNC--MMGGYVKRNRLVDARGIFDRMPER 152

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D ++WN+M++GY  N   +EA   F    +     T +  VS         E R  R   
Sbjct: 153 DEVSWNTMISGYAQNGELLEAQRLFEESPVRDV-FTWTAMVSGYVQNGMLDEAR--RVFD 209

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
               KN + ++      ++  Y +C +M+ A ++F  M   ++V SW  MI+G+ QNG I
Sbjct: 210 GMPEKNSVSWN-----AIIAGYVQCKRMDQARELFEAM-PCQNVSSWNTMITGYAQNGDI 263

Query: 364 DLAVNF-------------------------------FCQMTREGVRPNGFTYSIILTAQ 392
             A NF                               F +M R+G R N  T++  L+  
Sbjct: 264 AQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTC 323

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             ++      QVH  ++K   E    VG ALL  Y K G +D+A  VFE I+EK++V+W+
Sbjct: 324 AEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWN 383

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----H 503
            M+AGYA+ G  + A+ ++  +   G+ P++ T   V++AC+  +  V++G ++      
Sbjct: 384 TMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSH-TGLVDKGTEYFYSMTQ 442

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
              I A   +  C    ++ +  + G ++ A  + K    + D  +W +++     HG+T
Sbjct: 443 DYGITANSKHYTC----MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNT 498

Query: 563 ---KKALEVFKEM 572
              +KA ++  EM
Sbjct: 499 ELGEKAAKMIFEM 511



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 209/451 (46%), Gaps = 43/451 (9%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y K+ + +FD  P +N + +N +L  Y ++   ++A  LF       L  +   +   +K
Sbjct: 76  YVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVK 135

Query: 87  TCGCLFD--HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
               L D   +F R            RD     +++  Y +   + + +R+F++    +V
Sbjct: 136 R-NRLVDARGIFDRMPE---------RDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV 185

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAVQVHT 203
            +WT+++SGY +N M D    +F  M     + NS +++ ++ G +  + +         
Sbjct: 186 FTWTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQARELFEA 241

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
           M  +N      S  N +I+ Y ++  +  AR  FD M  RDSI+W +++AGY  +    E
Sbjct: 242 MPCQN-----VSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEE 296

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   F  M   G  L RSTF S +  CA    L L +Q+H +V+K G++    +   L+V
Sbjct: 297 ALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLV 356

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y KCG ++DA  +F  + E K+VVSW  MI+G+ ++G    A+  F  M + G+ P+  
Sbjct: 357 MYCKCGNIDDAYIVFEGIEE-KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDV 415

Query: 384 TYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDE 431
           T   +L+A         H  ++    E  +S+             T +++   + G LD+
Sbjct: 416 TMVGVLSACS-------HTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDD 468

Query: 432 AAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
           A  + + +  E D   W A+L      G+TE
Sbjct: 469 AQNLMKNMPFEPDAATWGALLGASRIHGNTE 499



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 168/359 (46%), Gaps = 24/359 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-----LGIRRLGLPLFGSTLSSVLK 86
           + +FDR P+R+ V +N ++  Y ++    EA  LF       +      + G   + +L 
Sbjct: 143 RGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLD 202

Query: 87  TCGCLFDHVFGRQV---------HCECVKSGFARDV-------NVST--SLVDLYMRTNN 128
               +FD +  +           + +C +   AR++       NVS+  +++  Y +  +
Sbjct: 203 EARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGD 262

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           +   R  FD M + + +SW ++++GYA++   +  L LF  M+ +G + N  TF++ L  
Sbjct: 263 IAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLST 322

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
            A+   +    QVH  V+K G E    V NAL+ MY K   + DA  VF+G+E+++ ++W
Sbjct: 323 CAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSW 382

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVL 307
           N+M+AGY  +    EA   F +M   G      T V V+  C+ T  +    +  +S   
Sbjct: 383 NTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQ 442

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
             GI  +    T ++    + G+++DA  +   M    D  +W A++     +G  +L 
Sbjct: 443 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELG 501



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 125/239 (52%), Gaps = 19/239 (7%)

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           L   V+   L  A  +F+ + E+D+V+W+AML+GYAQ G  + A +I+ ++  +    N 
Sbjct: 37  LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NS 92

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
            +++ ++ A    +  +E  ++      ++K +  L   + ++  Y K+  +  A  +F 
Sbjct: 93  ISWNGML-AAYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFD 147

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
           R  +RD VSWN+MI GYAQ+G   +A  +F+E   +D+     T+  +++     G++DE
Sbjct: 148 RMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDE 203

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            ++ FD M  ++ +      ++ ++  Y +   +++A ++   MP   + + W T++  
Sbjct: 204 ARRVFDGMPEKNSV-----SWNAIIAGYVQCKRMDQARELFEAMP-CQNVSSWNTMITG 256



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 21/173 (12%)

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
           N+ +A  +F +  +RD+VSWN+M+ GYAQ+G+ K+A E+F EM  +    + I++ G++ 
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLA 100

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           A    G +++ ++ F+   +   I      ++CM+  Y +   L  A  I +RMP     
Sbjct: 101 AYVQNGRIEDARRLFESKADWELI-----SWNCMMGGYVKRNRLVDARGIFDRMP-ERDE 154

Query: 650 TVWRT----------VLAACRLISLQP-HDSAIYVLLSNMYAATGHWQERARV 691
             W T          +L A RL    P  D   +  + + Y   G   E  RV
Sbjct: 155 VSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRV 207


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/812 (31%), Positives = 430/812 (52%), Gaps = 22/812 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF   PQRN V +  ++     +   +EAL  +  +R+ G+    + L++V+  CG L
Sbjct: 99  QRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGAL 158

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V G QV    V SG    V+V+ SL+ ++     V+D  R+FD M E + +SW +++
Sbjct: 159 EDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMI 218

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y+  ++  +   +   M+   +KP+  T  +++ V A   +VA    +H++ + +G  
Sbjct: 219 SMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLH 278

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + NAL++MY  +  + +A ++F  M  RD I+WN+M++ YV +   +EA ET   +
Sbjct: 279 CSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQL 338

Query: 272 GLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
                    S TF S +  C++ + L   R +H+ +L+  +     I   L+  YSKC  
Sbjct: 339 LQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNS 398

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           MED  ++F  M    DVVS   +  G+     +  A+  F  M   G++PN  T   +  
Sbjct: 399 MEDTERVFESM-PCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQG 457

Query: 391 AQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
              ++         +HA++ +T       +  +L+  Y   G L+ +  +F  I+ K ++
Sbjct: 458 TCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVI 517

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+A++A   + G  E A+K++      G K + F  +  +++ +A  A++E+G Q H  
Sbjct: 518 SWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSS-SANLASLEEGMQLHGL 576

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           S+K  L+    V +A + MY K G ++   +       R    WN++I GYA++G+ K+A
Sbjct: 577 SVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEA 636

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
            + FK M     + D +TF+ +++AC+HAGL+D+G  Y++ M     + P ++H  C+VD
Sbjct: 637 EDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVD 696

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           L  R G   +A   I+ MP   +  +WR++L++ R              L+ L P D + 
Sbjct: 697 LLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSA 756

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLLSN+YA    W +  ++R  M   K+ K    SW+++KN+  +F  GD SH  + +I
Sbjct: 757 YVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKI 816

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           Y KL+E+  +L++ GY  DTS  L D D+E KE  L  HSE+LA+A+GL+  P G+ ++I
Sbjct: 817 YVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRI 876

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNR 823
            KNLRVC DCH V KL+S +  R+IV+RD  R
Sbjct: 877 FKNLRVCADCHLVFKLVSMVFHREIVLRDPYR 908



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 166/638 (26%), Positives = 316/638 (49%), Gaps = 31/638 (4%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GCLFDHV 95
           P R    +   +    R  L   A  L   +R   +PL G  L+S++  C   G      
Sbjct: 2   PHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAA 61

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G  +H    ++G   +V + T+L+ LY     V + +R+F +M + NVVSWT+++   +
Sbjct: 62  CGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALS 121

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEV 212
            N   +  L  + RM+ EG+  N+   +TV+   G L DE      +QV   V+ +G   
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDE---VAGLQVTAHVVVSGLLT 178

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             SV N+LI+M+   + V+DA  +FD ME+RD I+WN+M++ Y   E++ + F   ++M 
Sbjct: 179 HVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR 238

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               +   +T  S++ +CA++  + L   +HS  + +G+     +   L+  YS  GK++
Sbjct: 239 HGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLD 298

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM--TREGVRPNGFTYSIILT 390
           +A  +F  M   +DV+SW  MIS ++Q+ +   A+    Q+  T EG  PN  T+S  L 
Sbjct: 299 EAESLFRNMSR-RDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-PPNSMTFSSALG 356

Query: 391 A----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A    +  ++   +HA I++ + +    +G +LL  Y K   +++  +VFE +   D+V+
Sbjct: 357 ACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVS 416

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            + +  GYA + D   A++++  +   G+KPN  T  ++   C +       G   HA  
Sbjct: 417 CNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            +  L +   ++++L+TMY+  G++ES++ +F R   + ++SWN++I    +HG  ++A+
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAI 536

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV------NEHHIYPTMEHY 620
           ++F + +    + D       +++  +   ++EG Q   + V      + H +  TM   
Sbjct: 537 KLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATM--- 593

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
               D+Y + G ++  +  +   P       W T+++ 
Sbjct: 594 ----DMYGKCGKMDCMLKTLPD-PAHRPTQCWNTLISG 626


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/759 (33%), Positives = 430/759 (56%), Gaps = 26/759 (3%)

Query: 32  QSLFDRSPQR-NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           Q++F+  P   + V +N L+  Y ++   Q+++ +FL +R LG+    +TL+  LK C  
Sbjct: 110 QAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSL 169

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D V G Q+H   V+ GF  DV   ++LVD+Y + N++ED   VF ++ + N +SW++ 
Sbjct: 170 LEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAA 229

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN-- 208
           ++G  +N    R L+LF  MQ +GI  +  T+++V    A         Q+H   +K   
Sbjct: 230 IAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDF 289

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +V+  V  A + MY K   + DA  +F  + D +  ++N+M+ GY  NE   +AF+ F
Sbjct: 290 GSDVI--VGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLF 347

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             +          +    +   A  K      QLH   +K+ +  +  +   ++  Y KC
Sbjct: 348 LQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKC 407

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G + +AS +F  M E++D VSW A+I+   QN +    ++ F  M R  + P+ FTY  +
Sbjct: 408 GALVEASGLFDEM-EIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSV 466

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A      F    +VH  IIK+       VG+AL++ Y K G+++EA K+   ++E+ +
Sbjct: 467 LKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTM 526

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+W+A+++G++    +E + + +  +   GV+P+ FT+++V++ C A  A V  GKQ HA
Sbjct: 527 VSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTC-ANLATVGLGKQIHA 585

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             IK +L + + ++S LV MYSK GN+  +  +F++  KRD V+WN+MICG+A HG  ++
Sbjct: 586 QMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEE 645

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           ALE+F+ M  ++++ +  TF+ V+ AC+H G   +G  YF  M + + + P +EHYSCMV
Sbjct: 646 ALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMV 705

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           D+  R+G +E+A+ +I  MPF A A +WRT+L+ C+              L+ L P DS+
Sbjct: 706 DILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSS 765

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            Y LLSN+YA  G WQ+ +++R+ M    +KKE G SWIEVK++ ++FL  D +HP+   
Sbjct: 766 AYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEM 825

Query: 731 IYSKLEELSTRLKDAGYKPDTSYV-LQDIDDEHKEAILS 768
           IYS L+ L   ++ +G  P+   + ++++++   + + S
Sbjct: 826 IYSLLDLLICDMRRSGCAPEIDTIQVEEVEENRHQKVKS 864



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 166/618 (26%), Positives = 295/618 (47%), Gaps = 59/618 (9%)

Query: 92  FDHVF-----------GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           F H+F           G++ H   + SGF   V V+  L+ +Y++   +E   +VF++M 
Sbjct: 27  FSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMP 86

Query: 141 ES--------------------------------NVVSWTSLLSGYARNKMNDRVLELFH 168
           +                                 +VVSW SL+SGY +N    + + +F 
Sbjct: 87  QRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFL 146

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           +M+  G+  +  T +  L + +        +Q+H + ++ G +      +AL+ MY K  
Sbjct: 147 KMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCN 206

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            + D+  VF  + D++ I+W++ +AG V N+  +   + F  M   G  +++ST+ SV +
Sbjct: 207 SLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFR 266

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            CA     RL  QLH   LK     D  + T  +  Y+KC  M DA K+FS++ +  ++ 
Sbjct: 267 SCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPD-HNLQ 325

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHI 404
           S+ AMI G+ +N     A   F Q+ +     +  + S  L+A   +       Q+H   
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG-A 463
           IK+N   +  V  A+L+ Y K G L EA+ +F+ ++ +D V+W+A++    Q  ++EG  
Sbjct: 386 IKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQ-NESEGKT 444

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           +  +  +    ++P+EFT+ SV+ AC A   A   G + H   IK+ +   + V SALV 
Sbjct: 445 LSHFGAMLRSKMEPDEFTYGSVLKAC-AGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVD 503

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MYSK G +E A ++  R  ++ +VSWN++I G++    ++ +   F  M    +E D  T
Sbjct: 504 MYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFT 563

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEH---HIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
           +  V+  C +   V  G+Q    M+       +Y T    S +VD+YS+ G +  ++ + 
Sbjct: 564 YATVLDTCANLATVGLGKQIHAQMIKLELLSDVYIT----STLVDMYSKCGNMHDSLLMF 619

Query: 641 NRMPFAASATVWRTVLAA 658
            + P   S T W  ++  
Sbjct: 620 RKAPKRDSVT-WNAMICG 636



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 199/416 (47%), Gaps = 38/416 (9%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC----------- 328
           R TF  + + C+  + L+  ++ H+ ++ +G      +   L+  Y KC           
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83

Query: 329 --------------------GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
                               G+ME A  +F+ M    DVVSW ++ISG+LQNG I  ++ 
Sbjct: 84  EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143

Query: 369 FFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
            F +M   GV  +  T ++ L      +  V   Q+H   ++  ++     G+AL++ Y 
Sbjct: 144 VFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           K   L+++  VF  + +K+ ++WSA +AG  Q       +K+++++  +G+  ++ T++S
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           V  +C   SA+   G Q H  ++K    + + V +A + MY+K  N+  A ++F      
Sbjct: 264 VFRSCAGLSAS-RLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDH 322

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           +L S+N+MI GYA++    +A ++F ++++    FD ++  G ++A        EG Q  
Sbjct: 323 NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLH 382

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            + +   ++   +   + ++D+Y + G L +A  + + M      + W  ++ AC 
Sbjct: 383 GLAIKS-NLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVS-WNAIITACE 436


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/744 (34%), Positives = 411/744 (55%), Gaps = 57/744 (7%)

Query: 115 VSTSL-VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
           VST++ +  Y+++ N+ + R++FD M E   V+WT L+ GY++        ELF +MQ  
Sbjct: 79  VSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC 138

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G +P+  TF T+L       +     QV T +IK G +    V N L+  Y KS  +  A
Sbjct: 139 GTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 198

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             +F  M + DS T+ +++                 N+GL                    
Sbjct: 199 CQLFKEMPEIDSFTFAAVLCA---------------NIGL-------------------- 223

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
            ++ L +Q+HS V+K    ++  +   L+  YSK   + DA K+F  M E +D VS+  +
Sbjct: 224 DDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE-QDGVSYNVI 282

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           ISG+  +G    A + F ++         F ++ +L+       +    Q+HA  I T  
Sbjct: 283 ISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA 342

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +    VG +L++ Y K G  +EA  +F  +  +  V W+AM++ Y Q G  E  ++++ +
Sbjct: 343 DSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNK 402

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +    V  ++ TF+S++ A +A  A++  GKQ H+  IK+   + +   SAL+ +Y+K G
Sbjct: 403 MRQASVIADQATFASLLRA-SASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCG 461

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
           +I+ A + F+    R++VSWN+MI  YAQ+G  +  L+ FKEM    L+ D ++F+GV++
Sbjct: 462 SIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 521

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC+H+GLV+EG  +F+ M   + + P  EHY+ +VD+  R+G   +A  ++  MP     
Sbjct: 522 ACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDE 581

Query: 650 TVWRTVLAACRLISLQP---------------HDSAIYVLLSNMYAATGHWQERARVRKL 694
            +W +VL ACR+   Q                 D+A YV +SN+YAA G W+  ++V K 
Sbjct: 582 IMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKA 641

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M DR VKK   YSW+E+K++T+ F A D  HPQ  +I  K++ L+  +++ GYKPDTS  
Sbjct: 642 MRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCA 701

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L + D++ K   L  HSERLAIAF L++TP G+P+ ++KNLR C DCH  IK+ISK+  R
Sbjct: 702 LHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGR 761

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +I VRD+ RFHHF++G CSCGD+W
Sbjct: 762 EITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 262/531 (49%), Gaps = 49/531 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD   +R  V +  L+  Y + +  +EA  LF+ ++R G      T  ++L  C   
Sbjct: 98  RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN-- 155

Query: 92  FDHVFGR---QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             H  G    QV  + +K G+   + V  +LVD Y ++N ++   ++F +M E       
Sbjct: 156 -GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE------- 207

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
                                        +SFTF+ VL        +    Q+H+ VIK 
Sbjct: 208 ----------------------------IDSFTFAAVLCANIGLDDIVLGQQIHSFVIKT 239

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                  V NAL+  Y K   V DAR +FD M ++D +++N +++GY  +  H  AF+ F
Sbjct: 240 NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 299

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             +     +  +  F +++ + + T +  + RQ+H+Q +    D +  +   L+  Y+KC
Sbjct: 300 RELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC 359

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           GK E+A  IF+ +   +  V WTAMIS ++Q G  +  +  F +M +  V  +  T++ +
Sbjct: 360 GKFEEAEMIFTNLTH-RSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 418

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A  +++      Q+H+ IIK+ +  +   G+ALL+ Y K G + +A + F+ + +++I
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 478

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK-QFH 503
           V+W+AM++ YAQ G+ E  +K ++++   G++P+  +F  V++AC+  S  VE+G   F+
Sbjct: 479 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSH-SGLVEEGLWHFN 537

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           + +   KL+      +++V M  + G    A ++        D + W+S++
Sbjct: 538 SMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 588



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 230/464 (49%), Gaps = 24/464 (5%)

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           ++K G +  TS  N  +  +LK+  +  AR +F+ M  +++++ N M++GYV +    EA
Sbjct: 38  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 97

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            + F+ M     E T  T+  +I   +   + + A +L  Q+ + G + D+     L+  
Sbjct: 98  RKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL-- 151

Query: 325 YSKCGKMEDASKIFSMMREM------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
            S C   E  ++I  +  ++        ++    ++  + ++  +DLA    CQ+ +E  
Sbjct: 152 -SGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA----CQLFKEMP 206

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
             + FT++ +L A   +       Q+H+ +IKTN+  +  V  ALL+ Y K   + +A K
Sbjct: 207 EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARK 266

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F+ + E+D V+++ +++GYA  G  + A  ++R+L        +F F++++ +  + + 
Sbjct: 267 LFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATML-SIASNTL 325

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
             E G+Q HA +I    ++ + V ++LV MY+K G  E A  +F     R  V W +MI 
Sbjct: 326 DWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMIS 385

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            Y Q G  ++ L++F +MR+  +  D  TF  ++ A      +  G+Q    ++    + 
Sbjct: 386 AYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMS 445

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                 S ++D+Y++ G ++ A+     MP   +   W  +++A
Sbjct: 446 NVFSG-SALLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMISA 487



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 165/339 (48%), Gaps = 10/339 (2%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK D     + LFD  P+++ V YN ++  Y  D  H+ A +LF  ++          
Sbjct: 254 FYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFP 313

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +++L       D   GRQ+H + + +    ++ V  SLVD+Y +    E+   +F ++ 
Sbjct: 314 FATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 373

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + V WT+++S Y +    +  L+LF++M+   +  +  TF+++L   A    ++   Q
Sbjct: 374 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 433

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H+ +IK+G        +AL+ +Y K   ++DA   F  M DR+ ++WN+M++ Y  N  
Sbjct: 434 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGE 493

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATT---KELRLARQLHSQVLKNGIDFDHNI 317
                ++F  M L+G +    +F+ V+  C+ +   +E        +Q+ K     +H  
Sbjct: 494 AEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA 553

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
               M+  S  G+  +A K+ + M    D + W+++++ 
Sbjct: 554 SVVDMLCRS--GRFNEAEKLMAEMPIDPDEIMWSSVLNA 590



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 37/312 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F     R+ V +  ++  Y +   ++E L LF  +R+  +    +T +S+L+    +  
Sbjct: 368 IFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS 427

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   +KSGF  +V   ++L+D+Y +  +++D  + F +M + N+VSW +++S 
Sbjct: 428 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISA 487

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV-QVHTMVIKNGGEV 212
           YA+N   +  L+ F  M + G++P+S +F  VL   +  G+V   +   ++M      + 
Sbjct: 488 YAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDP 547

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                 +++ M  +S    +A  +   M  D D I W+                      
Sbjct: 548 RREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWS---------------------- 585

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                        SV+  C   K   LAR+   Q+       D      +   Y+  G+ 
Sbjct: 586 -------------SVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQW 632

Query: 332 EDASKIFSMMRE 343
           E+ SK+   MR+
Sbjct: 633 ENVSKVHKAMRD 644



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 32/187 (17%)

Query: 400 VHAHIIKTNYE-----KSFSVGTALLN--------------------------AYVKKGI 428
           + A I+KT ++      +F VG  L N                           YVK G 
Sbjct: 34  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           L EA K+F+ + E+  V W+ ++ GY+Q+   + A +++ Q+   G +P+  TF ++++ 
Sbjct: 94  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C        Q  Q     IK   ++ L V + LV  Y K   ++ A ++FK   + D  +
Sbjct: 154 CNGHEMG-NQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFT 212

Query: 549 WNSMICG 555
           + +++C 
Sbjct: 213 FAAVLCA 219


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 266/809 (32%), Positives = 431/809 (53%), Gaps = 24/809 (2%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           N  L + C     ++AL     ++ + +P+      ++++ C     +  G  V    + 
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61

Query: 107 SGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           S      V +  +L+ +++R  +V +   VF  M E ++ SW  L+ GY +    D  L 
Sbjct: 62  SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L+HR+   GI+P+ +TF +VL   A    +    +VH  V++   ++   V NALI+MY+
Sbjct: 122 LYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYV 181

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   V  AR +FD M  RD I+WN+M++GY  N+  +E  E F  M     +    T  S
Sbjct: 182 KCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTS 241

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           VI  C    + RL  QLHS V++   D + ++   L+  Y   G  ++A  +FS M E +
Sbjct: 242 VISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM-ECR 300

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVH 401
           DVVSWT +ISG + N   D A+  +  M   G  P+  T + +L+A  ++       ++H
Sbjct: 301 DVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLH 360

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
               +T +     V  +L++ Y K   +++A ++F  I +KD+++W++++ G        
Sbjct: 361 ELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCF 420

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+  +R++  +  KPN  T  S ++AC A   A+  GK+ HA ++KA +     + +A+
Sbjct: 421 EALIFFRKMILKS-KPNSVTLISALSAC-ARVGALMCGKEIHAHALKAGMGFDGFLPNAI 478

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + +Y + G + +A   F    K D+ +WN ++ GYAQ G     +E+FK M   ++  D 
Sbjct: 479 LDLYVRCGRMRTALNQFNLNEK-DVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDD 537

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +TFI ++ AC+ +G+V EG +YF  M   +HI P ++HY+C+VDL  RAG L +A + I 
Sbjct: 538 VTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIE 597

Query: 642 RMPFAASATVWRTVLAACRL-------------ISLQPHDS-AIYVLLSNMYAATGHWQE 687
           RMP      +W  +L ACR+             I  Q  +S   Y+LL N+YA +G W E
Sbjct: 598 RMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDE 657

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
            A+VR+ M +  +  + G SW+EVK K ++FL+GD  HPQ  +I   LE    ++K +G+
Sbjct: 658 VAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGF 717

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
                  +  I    K  I   HSER AIA+ L+ +  G P+ + KNL +C  CH+ +K 
Sbjct: 718 NGQECSSMDGIQTS-KADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKF 776

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
           ISK+ RR+I VRDT +FHHFK+GLCSCGD
Sbjct: 777 ISKIVRREISVRDTEQFHHFKDGLCSCGD 805



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 171/584 (29%), Positives = 286/584 (48%), Gaps = 12/584 (2%)

Query: 7   LKSLINPQTKQPPKSLRSPFYSKKD----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEA 62
           L SL+   + +   +L S F    D     ++F R  +R+   +N L+  Y +     EA
Sbjct: 60  LSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEA 119

Query: 63  LNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDL 122
           L L+  I   G+     T  SVL++C    D V GR+VH   V+  F  DV+V  +L+ +
Sbjct: 120 LCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITM 179

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           Y++  +V   R +FD M   + +SW +++SGY  N      LELF RM+   I P+  T 
Sbjct: 180 YVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTM 239

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           ++V+      G      Q+H+ V++   +   SV N+LI MYL     ++A +VF GME 
Sbjct: 240 TSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMEC 299

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           RD ++W ++++G V N L  +A ET+  M + G      T  SV+  CA+  +L +  +L
Sbjct: 300 RDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKL 359

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H    + G      +   L+  YSKC ++E A +IF  + + KDV+SWT++I+G   N  
Sbjct: 360 HELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPD-KDVISWTSVINGLRINNR 418

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
              A+ FF +M  +  +PN  T    L+A   V       ++HAH +K        +  A
Sbjct: 419 CFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNA 477

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           +L+ YV+ G +  A   F L +EKD+ AW+ +L GYAQ G     +++++++    + P+
Sbjct: 478 ILDLYVRCGRMRTALNQFNL-NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPD 536

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           + TF S++ AC+      E  + F    +   +   L   + +V +  + G +  A E  
Sbjct: 537 DVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFI 596

Query: 539 KRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           +R   K D   W +++     H H        + + +QD E  G
Sbjct: 597 ERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIG 640


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/713 (35%), Positives = 404/713 (56%), Gaps = 39/713 (5%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT---MVI 206
           L+S     K+N+   E F  M   G+  + +++  +     +   ++    +H    M I
Sbjct: 53  LVSLSKHGKLNE-AFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGI 111

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           +N   ++    N ++ MY +   + DA  +FD M D ++++  +M++ Y    L  +A  
Sbjct: 112 ENPSVLLQ---NCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVG 168

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M  +G +   S + +++K     + L + RQ+H+ V++ G+  + +I TG++  Y 
Sbjct: 169 LFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYV 228

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG +  A ++F  M  +K  V+WT ++ G+ Q G    A+  F  +  EGV  + F +S
Sbjct: 229 KCGWLVGAKRVFDQM-AVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFS 287

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           ++L A  ++       Q+HA + K   E   SVGT L++ Y+K    + A + F+ I E 
Sbjct: 288 VVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREP 347

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           + V+WSA+++GY Q+   E AVK ++ L S+  V  N FT++S+  AC+   A    G Q
Sbjct: 348 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVL-ADCNIGGQ 406

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            HA +IK  L  +    SAL+TMYSK G ++ A EVF+     D+V+W + I G+A +G+
Sbjct: 407 VHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGN 466

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
             +AL +F++M    ++ + +TFI V+TAC+HAGLV++G+ Y D M+ ++++ PT++HY 
Sbjct: 467 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYD 526

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPH 667
           CM+D+Y+R+G+L++A+  +  MPF   A  W+  L+ C               L  L P 
Sbjct: 527 CMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPE 586

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           D+A YVL  N+Y   G W+E A V KLMN+R +KKE   SWI+ K K + F+ GD  HPQ
Sbjct: 587 DTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQ 646

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT--PA 785
           S +IY KL+E    ++   ++   +        E +E +L  HSERLAIAFGL++    A
Sbjct: 647 SQEIYEKLKEFDGFMEGDMFQCSMT--------ERREQLL-DHSERLAIAFGLISVNGNA 697

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            AP+++ KNLR C DCH   K +S +   +IV+RD+ RFHHFKEG CSC DYW
Sbjct: 698 RAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 281/555 (50%), Gaps = 12/555 (2%)

Query: 61  EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLV 120
           EA   F  + + G+ +   +   + + C  L     GR +H           V +   ++
Sbjct: 64  EAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVL 123

Query: 121 DLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
            +Y    ++ED  ++FD+M++ N VS T+++S YA   + D+ + LF RM   G KP S 
Sbjct: 124 QMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSS 183

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
            ++T+L  L +   +    Q+H  VI+ G     S+   +++MY+K   +  A+ VFD M
Sbjct: 184 MYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQM 243

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             +  + W  ++ GY       +A + F ++   G E     F  V+K CA+ +ELR  +
Sbjct: 244 AVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGK 303

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           Q+H+ V K G++ + ++ T L+  Y KC   E A + F  +RE  D VSW+A+ISG+ Q 
Sbjct: 304 QIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPND-VSWSAIISGYCQM 362

Query: 361 GAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSV 415
              + AV  F  + ++  V  N FTY+ I  A   ++      QVHA  IK +   S   
Sbjct: 363 SQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 422

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
            +AL+  Y K G LD+A +VFE +D  DIVAW+A ++G+A  G+   A++++ ++ S G+
Sbjct: 423 ESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 482

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS--SALVTMYSKKGNIES 533
           KPN  TF +V+ AC+  +  VEQGK +    ++ K N A  +     ++ +Y++ G ++ 
Sbjct: 483 KPNSVTFIAVLTACSH-AGLVEQGKHYLDTMLR-KYNVAPTIDHYDCMIDIYARSGLLDE 540

Query: 534 ASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
           A    K    + D +SW   + G   H + +      +E+R+ D E D   ++      T
Sbjct: 541 ALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPE-DTAGYVLPFNLYT 599

Query: 593 HAGLVDEGQQYFDIM 607
            AG  +E  +   +M
Sbjct: 600 WAGKWEEAAEVMKLM 614



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 165/345 (47%), Gaps = 18/345 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+   +  V +  L+  Y +    ++AL LF+ +   G+       S VLK C  L
Sbjct: 237 KRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASL 296

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +  FG+Q+H    K G   +V+V T LVD Y++ ++ E   R F ++ E N VSW++++
Sbjct: 297 EELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 356

Query: 152 SGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIK 207
           SGY +    +  ++ F  ++ +  +  NSFT++++     VLAD  I     QVH   IK
Sbjct: 357 SGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNI---GGQVHADAIK 413

Query: 208 N---GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
               G +   S   ALI+MY K   + DA  VF+ M++ D + W + ++G+       EA
Sbjct: 414 RSLIGSQYGES---ALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEA 470

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN---GIDFDHNIRTGL 321
              F  M   G +    TF++V+  C+    +   +     +L+        DH     +
Sbjct: 471 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDH--YDCM 528

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +  Y++ G +++A +    M    D +SW   +SG   +  ++L 
Sbjct: 529 IDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELG 573


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/743 (33%), Positives = 399/743 (53%), Gaps = 108/743 (14%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD     +++  Y  +  + + R++F +    + ++W+SL+SGY R   +   LELF  M
Sbjct: 70  RDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEM 129

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           Q EG +PN FT+ +VL V +   ++    Q+H   IK   +    V   L+ MY K K +
Sbjct: 130 QYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCI 189

Query: 231 RDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            +A  +F+   D R+ + W +MV GY  N    +A E F +M   G E  + TF S++  
Sbjct: 190 LEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTA 249

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C +        Q+H  ++++G   +  + + L+  YSKCG + +A ++   M E+ D VS
Sbjct: 250 CGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETM-EVDDPVS 308

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY 409
           W +MI G ++ G  + A++ F  M    ++ + FTY       P++              
Sbjct: 309 WNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTY-------PSL-------------- 347

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                V  AL++ Y K+G  D A  VFE + +KD+++W++++ G    G  E A++++ +
Sbjct: 348 -----VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCE 402

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +   G+ P++   ++V++A                            + ++LV+MY+K G
Sbjct: 403 MRIMGIHPDQIVIAAVLSA----------------------------LDNSLVSMYAKCG 434

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
            IE A++VF     +D+++W ++I GYAQ+G                             
Sbjct: 435 CIEDANKVFDSMEIQDVITWTALIVGYAQNG----------------------------- 465

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
                     G+ YF  M   + I P  EHY+CM+DL  R+G L +A +++N+M     A
Sbjct: 466 ---------RGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDA 516

Query: 650 TVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
           TVW+ +LAACR              L  L+P ++  YVLLSN+Y+A G W+E A+ R+LM
Sbjct: 517 TVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLM 576

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
             R V KE G SWIE+ +K + F++ D SHP++ +IYSK++E+   +K+AGY PD ++ L
Sbjct: 577 KLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFAL 636

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
            D+D+E KE  L+ HSE+LA+AFGL+  P GAP++I KNLR+CGDCHT +K +S +  R 
Sbjct: 637 HDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRH 696

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           +++RD+N FHHF+EG CSC DYW
Sbjct: 697 VILRDSNCFHHFREGACSCSDYW 719



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 243/519 (46%), Gaps = 69/519 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF  +P R+ + ++ L+  YCR     EAL LF  ++  G      T  SVL+ C   
Sbjct: 92  RKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMY 151

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-DMNESNVVSWTSL 150
                G+Q+H   +K+ F  +  V T LVD+Y +   + +   +F+   ++ N V WT++
Sbjct: 152 VLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAM 211

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++GY++N    + +E F  M+ EGI+ N FTF ++L             QVH  ++++G 
Sbjct: 212 VTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGF 271

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V +AL+ MY K   + +AR + + ME  D ++WNSM+ G V   L  EA   F  
Sbjct: 272 GANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRI 331

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L   ++   T+ S++                                 L+  Y+K G 
Sbjct: 332 MHLRHMKIDEFTYPSLVN------------------------------NALVDMYAKRGY 361

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            + A  +F  M + KDV+SWT++++G + NG+ + A+  FC+M   G+ P+    + +L+
Sbjct: 362 FDYAFDVFEKMTD-KDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLS 420

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           A                       +  +L++ Y K G +++A KVF+ ++ +D++ W+A+
Sbjct: 421 A-----------------------LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTAL 457

Query: 451 LAGYAQIGDTEGAVKIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           + GYAQ     G  + Y Q   E  G+KP    ++ +I+        +E  +  +  +++
Sbjct: 458 IVGYAQ----NGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQ 513

Query: 509 AKLNNALCVSSALVTMYSKKGNIE----SASEVFKRQRK 543
                   V  AL+      GN+E    +A+ +F+ + K
Sbjct: 514 PDAT----VWKALLAACRVHGNVELGERAANNLFELEPK 548



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 202/433 (46%), Gaps = 91/433 (21%)

Query: 326 SKCGKMEDASKIFSMMRE------------------------------MKDVVSWTAMIS 355
           SKCG+++DA K+F +M +                              ++  ++W+++IS
Sbjct: 52  SKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLIS 111

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
           G+ + G    A+  F +M  EG RPN FT+  +L             Q+HAH IKT ++ 
Sbjct: 112 GYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDS 171

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELI-DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           +  V T L++ Y K   + EA  +FEL  D+++ V W+AM+ GY+Q GD   A++ +R +
Sbjct: 172 NAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDM 231

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
             EG++ N+FTF S++ AC + SA    G Q H C +++     + V SALV MYSK G+
Sbjct: 232 RGEGIECNQFTFPSILTACGSISAC-GFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGD 290

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           + +A  + +     D VSWNSMI G  + G  ++AL +F+ M  + ++ D  T       
Sbjct: 291 LSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFT------- 343

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
                                  YP++ + + +VD+Y++ G  + A D+  +M       
Sbjct: 344 -----------------------YPSLVN-NALVDMYAKRGYFDYAFDVFEKMT-DKDVI 378

Query: 651 VWRTVLAAC----------------RLISLQPHDSAIYVLLS-------NMYAATGHWQE 687
            W +++  C                R++ + P    I  +LS       +MYA  G  ++
Sbjct: 379 SWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIED 438

Query: 688 RARVRKLMNDRKV 700
             +V   M  + V
Sbjct: 439 ANKVFDSMEIQDV 451


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/731 (34%), Positives = 393/731 (53%), Gaps = 70/731 (9%)

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           R  N+E  R  F+ M      S+ +LL+GY RN++ D  L LF RM    +         
Sbjct: 29  RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL--------- 79

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS-MYLKSKMVRDARAVFDGMEDR 243
                                         +  NALIS + L+ + + DA A    +   
Sbjct: 80  ------------------------------ASYNALISGLSLRRQTLPDAAAALASIPFP 109

Query: 244 DSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
            S+ ++ S++ GYV + L  +A   F  M     E    ++  ++        +  AR+L
Sbjct: 110 PSVVSFTSLLRGYVRHGLLADAIRLFQQM----PERNHVSYTVLLGGLLDAGRVNEARRL 165

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
             ++     D D    T ++  Y + G++ +A  +F  M + ++VVSWTAMISG+ QNG 
Sbjct: 166 FDEM----PDRDVVAWTAMLSGYCQAGRITEARALFDEMPK-RNVVSWTAMISGYAQNGE 220

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNA 422
           ++LA   F  M       N  +++ +L         +  A +     E   +   A++  
Sbjct: 221 VNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG 276

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           + ++G++D A  VFE + E+D   WSAM+  Y Q      A+  +R++   GV+PN  + 
Sbjct: 277 FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            S++  C A  A ++ G++ HA  ++   +  +   SAL+TMY K GN++ A  VF    
Sbjct: 337 ISILTVCAA-LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D+V WNSMI GYAQHG  ++AL +F +MR   +  DGIT+IG +TAC++ G V EG++
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-- 660
            F+ M     I P  EHYSCMVDL  R+G++E+A D+I  MP    A +W  ++ ACR  
Sbjct: 456 IFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515

Query: 661 ------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                       L+ L+P ++  YVLLS++Y + G W++ +++RK ++ R + K  G SW
Sbjct: 516 RNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSW 575

Query: 709 IEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           IE   + + F +GD+ +HP+   I   LE+L   L ++GY  D S+VL DID+E K   L
Sbjct: 576 IEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSL 635

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
             HSER A+A+GL+  P G P++++KNLRVCGDCH+ IKLI+K+  R+I++RD NRFHHF
Sbjct: 636 RYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHF 695

Query: 828 KEGLCSCGDYW 838
           K+G CSC DYW
Sbjct: 696 KDGFCSCRDYW 706



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 213/487 (43%), Gaps = 77/487 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-----------------LGIRRLGL 74
           ++ F+  P R    YN LL  Y R+ L   AL LF                 L +RR  L
Sbjct: 37  RAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL 96

Query: 75  PLFGSTLSSV---------------------LKTCGCLFDHVFGR-QVHCECVKSGFA-- 110
           P   + L+S+                     L     LF  +  R  V    +  G    
Sbjct: 97  PDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDA 156

Query: 111 ---------------RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
                          RDV   T+++  Y +   + + R +FD+M + NVVSWT+++SGYA
Sbjct: 157 GRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYA 216

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           +N   +   +LF  M     + N  +++ +L      G V  A ++   +     E   +
Sbjct: 217 QNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQAGHVEDAAELFNAM----PEHPVA 268

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
            CNA++  + +  MV  A+ VF+ M +RD  TW++M+  Y  NE  MEA  TF  M   G
Sbjct: 269 ACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRG 328

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 + +S++ +CA    L   R++H+ +L+   D D    + L+  Y KCG ++ A 
Sbjct: 329 VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK 388

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F    E KD+V W +MI+G+ Q+G  + A+  F  M   G+ P+G TY   LTA    
Sbjct: 389 RVFHTF-EPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYT 447

Query: 396 SPFQVHAHIIKT-NYEKSFSVG----TALLNAYVKKGILDEAAKVFELID----EKDIVA 446
              +    I  +     S   G    + +++   + G+++EA   F+LI     E D V 
Sbjct: 448 GKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEA---FDLIKNMPVEPDAVI 504

Query: 447 WSAMLAG 453
           W A++  
Sbjct: 505 WGALMGA 511



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 11/128 (8%)

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +A +   ++ GNIE A   F+    R   S+N+++ GY ++     AL +F+ M  +DL 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI--YPTMEHYSCMVDLYSRAGMLEKA 636
               ++  +I+     GL    Q   D       I   P++  ++ ++  Y R G+L  A
Sbjct: 81  ----SYNALIS-----GLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADA 131

Query: 637 MDIINRMP 644
           + +  +MP
Sbjct: 132 IRLFQQMP 139


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/642 (36%), Positives = 374/642 (58%), Gaps = 22/642 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGA 276
           N+L+ +Y+K   +  AR +FD M  R+ ++WN ++AGY+    H+E    F NM  L  A
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                 F + +  C+    ++   Q H  + K G+     +++ L+  YS+C  +E A +
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 337 IFSMM--REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
           +   +    + D+ S+ ++++  +++G  + AV    +M  E V  +  TY  ++     
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +   Q    VHA +++        VG+ L++ Y K G +  A  VF+ +  +++V W+A+
Sbjct: 234 IRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTAL 293

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +  Y Q G  E ++ ++  +  EG  PNE+TF+ ++NAC A  AA+  G   HA   K  
Sbjct: 294 MTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNAC-AGIAALRHGDLLHARVEKLG 352

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
             N + V +AL+ MYSK G+I+S+  VF     RD+++WN+MICGY+ HG  K+AL+VF+
Sbjct: 353 FKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQ 412

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           +M   +   + +TFIGV++A +H GLV EG  Y + ++    I P +EHY+CMV L SRA
Sbjct: 413 DMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRA 472

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLS 676
           G+L++A + +           WRT+L AC +              + + PHD   Y LLS
Sbjct: 473 GLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLS 532

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           NMYA    W     +RKLM +R +KKE G SW++++N  + FL+   +HP+S QIY K++
Sbjct: 533 NMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQ 592

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           +L   +K  GY P+ + VL D++DE KE  LS HSE+LA+A+GL+  P+ AP++I+KNLR
Sbjct: 593 QLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLR 652

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +C DCHT +KLISK+  R I+VRD NRFHHF++G C+C D+W
Sbjct: 653 MCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 243/470 (51%), Gaps = 13/470 (2%)

Query: 96  FGRQVHCE-CVKSGFARDVNVS--TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           FG+ +H +  +++  +   ++S   SLV LY++   +   R +FD M   NVVSW  L++
Sbjct: 30  FGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMA 89

Query: 153 GYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           GY     +  VL LF  M  ++   PN + F+T L   +  G V   +Q H ++ K G  
Sbjct: 90  GYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLV 149

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFD---GMEDRDSITWNSMVAGYVTNELHMEAFETF 268
               V +AL+ MY +   V  A  V D   G    D  ++NS++   V +    EA E  
Sbjct: 150 CHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVL 209

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M          T+V V+ LCA  ++L+L  ++H+++L+ G+ FD  + + L+  Y KC
Sbjct: 210 RRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKC 269

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G++ +A  +F  ++  ++VV WTA+++ +LQNG  + ++N F  M REG  PN +T++++
Sbjct: 270 GEVLNARNVFDGLQN-RNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVL 328

Query: 389 LTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A   ++  +    +HA + K  ++    V  AL+N Y K G +D +  VF  +  +DI
Sbjct: 329 LNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDI 388

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           + W+AM+ GY+  G  + A+++++ + S    PN  TF  V++A +      E     + 
Sbjct: 389 ITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNH 448

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK-RQRKRDLVSWNSMI 553
                K+   L   + +V + S+ G ++ A    K  Q K D+V+W +++
Sbjct: 449 LMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLL 498



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 196/430 (45%), Gaps = 11/430 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           ++LFD  P RN V +N L+  Y     H E L LF  +  L          ++ L  C  
Sbjct: 70  RNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSH 129

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM---NESNVVSW 147
                 G Q H    K G      V ++LV +Y R ++VE   +V D +   + +++ S+
Sbjct: 130 GGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSY 189

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            S+L+    +   +  +E+  RM  E +  +  T+  V+G+ A    +   ++VH  +++
Sbjct: 190 NSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLR 249

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G      V + LI MY K   V +AR VFDG+++R+ + W +++  Y+ N    E+   
Sbjct: 250 GGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNL 309

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  M   G      TF  ++  CA    LR    LH++V K G      +R  L+  YSK
Sbjct: 310 FTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSK 369

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G ++ +  +F+ M   +D+++W AMI G+  +G    A+  F  M      PN  T+  
Sbjct: 370 SGSIDSSYNVFTDMI-YRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIG 428

Query: 388 ILTAQPAVS----PFQVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           +L+A   +      F    H+++    E      T ++    + G+LDEA    +    K
Sbjct: 429 VLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVK 488

Query: 443 -DIVAWSAML 451
            D+VAW  +L
Sbjct: 489 WDVVAWRTLL 498



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 133/278 (47%), Gaps = 1/278 (0%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+  C  + D   G +VH   ++ G   D  V + L+D+Y +   V + R VFD +
Sbjct: 223 TYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGL 282

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              NVV WT+L++ Y +N   +  L LF  M  EG  PN +TF+ +L   A    +    
Sbjct: 283 QNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGD 342

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +H  V K G +    V NALI+MY KS  +  +  VF  M  RD ITWN+M+ GY  + 
Sbjct: 343 LLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHG 402

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIR 318
           L  +A + F +M  A       TF+ V+   +    ++      + +++N  I+      
Sbjct: 403 LGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHY 462

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           T ++   S+ G +++A       +   DVV+W  +++ 
Sbjct: 463 TCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNA 500


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 265/744 (35%), Positives = 417/744 (56%), Gaps = 25/744 (3%)

Query: 29   KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
            K  + LF   P  + V +N ++  + +      A+  FL +R+  +    STL SVL   
Sbjct: 278  KDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAI 337

Query: 89   GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            G + +   G  VH E +K G A ++ V +SLV +Y +   +E   +VF+ + E N V W 
Sbjct: 338  GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWN 397

Query: 149  SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            +++ GYA N  + +V+ELF  M+  G   + FTF+++L   A    +    Q H+++IK 
Sbjct: 398  AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKK 457

Query: 209  GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                   V NAL+ MY K   + DAR +F+ M DRD+++WN+++ GYV +E   EAF+ F
Sbjct: 458  KLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLF 517

Query: 269  NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
              M   G     +   S +K C     L   +Q+H   +K G+D   +  + L+  YSKC
Sbjct: 518  MRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKC 577

Query: 329  GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            G +EDA K+FS M E   VVS  A+I+G+ QN  ++ AV  F +M  +GV P+  T++ I
Sbjct: 578  GIIEDARKVFSSMPEWS-VVSMNALIAGYSQNN-LEEAVVLFQEMLTKGVNPSEITFATI 635

Query: 389  LTA----QPAVSPFQVHAHIIKTNYEKSFS-VGTALLNAYVKKGILDEAAKVF-ELIDEK 442
            + A    +      Q H  IIK  +      +G +LL  Y+    + EA  +F EL   K
Sbjct: 636  VEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPK 695

Query: 443  DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
             IV W+ M++G++Q G  E A+K Y+++  +G  P++ TF +V+  C+  S ++ +G+  
Sbjct: 696  SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLS-SLREGRAI 754

Query: 503  HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQHGH 561
            H+       +     S+ L+ MY+K G+++S+S+VF   R+R ++VSWNS+I GYA++G+
Sbjct: 755  HSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814

Query: 562  TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
             + AL++F  MR+  +  D ITF+GV+TAC+HAG V +G++ F++M+ ++ I   ++H +
Sbjct: 815  AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874

Query: 622  CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPH 667
            CMVDL  R G L++A D I        A +W ++L AC              RLI L+P 
Sbjct: 875  CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQ 934

Query: 668  DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
            +S+ YVLLSN+YA+ G W+E   +RK M DR VKK  GYSWI+V  + + F AGD SH  
Sbjct: 935  NSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSD 994

Query: 728  SNQIYSKLEELSTRLK-DAGYKPD 750
              +I   LE+L   +K DA   PD
Sbjct: 995  IGKIEMFLEDLYDLMKDDAVVNPD 1018



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 265/528 (50%), Gaps = 42/528 (7%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T S VL T     +  FGRQ+HC  +K G  R+     +LVD+Y + + + D +RVFD +
Sbjct: 162 TFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGI 221

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + N V WT L SGY +  + +  + +F RM+ EG +P+   F TV              
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV-------------- 267

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
                                I+ Y+    ++DAR +F  M   D + WN M++G+    
Sbjct: 268 ---------------------INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRG 306

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
             + A E F NM  +  + TRST  SV+        L L   +H++ +K G+  +  + +
Sbjct: 307 CEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YSKC KME A+K+F  + E  DV+ W AMI G+  NG     +  F  M   G  
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEERNDVL-WNAMIRGYAHNGESHKVMELFMDMKSSGYN 425

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            + FT++ +L+            Q H+ IIK    K+  VG AL++ Y K G L++A ++
Sbjct: 426 IDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQI 485

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE + ++D V+W+ ++ GY Q  +   A  ++ ++ S G+  +    +S + ACT     
Sbjct: 486 FEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVH-G 544

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           + QGKQ H  S+K  L+  L   S+L+ MYSK G IE A +VF    +  +VS N++I G
Sbjct: 545 LYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAG 604

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           Y+Q+ + ++A+ +F+EM  + +    ITF  ++ AC     +  G Q+
Sbjct: 605 YSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQF 651



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 275/553 (49%), Gaps = 43/553 (7%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G+ VH + +  G   +  +  ++VDLY +   V    + F+ + E +V +W S+LS Y+
Sbjct: 78  IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYS 136

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
                 +VL  F  +    I PN FTFS VL   A E  V    Q+H  +IK G E  + 
Sbjct: 137 SIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSY 196

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
              AL+ MY K   + DA+ VFDG+ D +++ W  + +GYV   L  EA   F  M   G
Sbjct: 197 CGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEG 256

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                  FV+VI                                     Y   GK++DA 
Sbjct: 257 HRPDHLAFVTVIN-----------------------------------TYISLGKLKDAR 281

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F  M    DVV+W  MISGH + G   +A+ +F  M +  V+    T   +L+A   V
Sbjct: 282 LLFGEMPS-PDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIV 340

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +       VHA  IK     +  VG++L++ Y K   ++ AAKVFE ++E++ V W+AM+
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMI 400

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            GYA  G++   ++++  + S G   ++FTF+S+++ C A S  +E G QFH+  IK KL
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC-AVSHDLEMGSQFHSIIIKKKL 459

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
              L V +ALV MY+K G +E A ++F+    RD VSWN++I GY Q  +  +A ++F  
Sbjct: 460 TKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMR 519

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M    +  DG      + ACT+   + +G+Q   + V +  +   +   S ++D+YS+ G
Sbjct: 520 MNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSV-KCGLDRVLHTGSSLIDMYSKCG 578

Query: 632 MLEKAMDIINRMP 644
           ++E A  + + MP
Sbjct: 579 IIEDARKVFSSMP 591



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 288/549 (52%), Gaps = 16/549 (2%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            ++++ Y+    ++D R +F +M   +VV+W  ++SG+ +       +E F  M+   +K
Sbjct: 265 VTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVK 324

Query: 177 PNSFTFSTVLGVLADEGIVAT---AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
               T  +VL  +   GIVA     + VH   IK G      V ++L+SMY K + +  A
Sbjct: 325 STRSTLGSVLSAI---GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             VF+ +E+R+ + WN+M+ GY  N    +  E F +M  +G  +   TF S++  CA +
Sbjct: 382 AKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVS 441

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
            +L +  Q HS ++K  +  +  +   L+  Y+KCG +EDA +IF  M + +D VSW  +
Sbjct: 442 HDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD-RDNVSWNTI 500

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           I G++Q+     A + F +M   G+  +G   +  L A   V       QVH   +K   
Sbjct: 501 IGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGL 560

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           ++    G++L++ Y K GI+++A KVF  + E  +V+ +A++AGY+Q  + E AV ++++
Sbjct: 561 DRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ-NNLEEAVVLFQE 619

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN-ALCVSSALVTMYSKK 528
           + ++GV P+E TF++++ AC  P  ++  G QFH   IK   ++    +  +L+ +Y   
Sbjct: 620 MLTKGVNPSEITFATIVEACHKPE-SLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNS 678

Query: 529 GNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
             +  A  +F      + +V W  M+ G++Q+G  ++AL+ +KEMR      D  TF+ V
Sbjct: 679 RRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTV 738

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           +  C+    + EG+    ++ +  H    +   + ++D+Y++ G ++ +  + + M   +
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTS-NTLIDMYAKCGDMKSSSQVFDEMRRRS 797

Query: 648 SATVWRTVL 656
           +   W +++
Sbjct: 798 NVVSWNSLI 806



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 42/309 (13%)

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           LR+ + +HS+ L  GID +  +   ++  Y+KC ++  A K F+ +   KDV +W +M+S
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE--KDVTAWNSMLS 133

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL--TAQPAVSPF--QVHAHIIKTNYEK 411
            +   G     +  F  +    + PN FT+SI+L  +A+     F  Q+H  +IK   E+
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           +   G AL++ Y K   L +A +VF+ I + + V W+ + +GY + G  E AV ++ ++ 
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
            EG +P+   F +VIN                                     Y   G +
Sbjct: 254 GEGHRPDHLAFVTVINT------------------------------------YISLGKL 277

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           + A  +F      D+V+WN MI G+ + G    A+E F  MR+  ++    T   V++A 
Sbjct: 278 KDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAI 337

Query: 592 THAGLVDEG 600
                +D G
Sbjct: 338 GIVANLDLG 346


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/692 (34%), Positives = 391/692 (56%), Gaps = 31/692 (4%)

Query: 175 IKPNSFTFSTVLGVL------ADEGIVATAVQVHTMVIKNGGEVVTSV--CNALISMYLK 226
           ++PN+ + S+ L ++      AD   +     +H+ +I        S+   N+LI+ Y K
Sbjct: 19  LRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAK 78

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              V  A  +FD M +R+ ++W++++ GY+ N   ++      +M ++   ++ + ++  
Sbjct: 79  VNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDM-ISEGNVSPNEYILA 137

Query: 287 IKL--CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           I +  C     +   RQ H  +LK G  F + +R  L+  YSKC  ++DA  +++ +  +
Sbjct: 138 IAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEV-PV 196

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SIILTAQPAVSPFQV 400
            D+V++ +++S  ++NG +   +     M  E V+ +  T+    S+  + +       V
Sbjct: 197 NDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHV 256

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  ++ ++ E    V +A++N Y K G    A  VF+ +  +++V W+A++A   Q G  
Sbjct: 257 HGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCF 316

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           E A+ ++ ++  E VK NEFT++ ++NAC   SA    G   H  S K+   + + V +A
Sbjct: 317 EEALNLFSKMEQENVKSNEFTYAVLLNACAGLSAR-RNGSLLHGHSEKSGFKHHVMVGNA 375

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+ MY+K G+IE+A +VF     RD+++WN+MICG++ HG  KKAL VF++M   +   +
Sbjct: 376 LINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPN 435

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            +TF GV++AC H GLV EG  Y   ++ +  + P +EHY+C+V L S+ G L +A + +
Sbjct: 436 YVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFM 495

Query: 641 NRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQ 686
              P       WRT+L AC +              + + P+D   Y LLSN+YA    W 
Sbjct: 496 RTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWD 555

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
              +VRKLM D+K+KKE G SWIE+ N T+ F + D  HP   Q Y K++EL   +K  G
Sbjct: 556 GVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLG 615

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PD   VL D++DE KE  LS HSE+LAIA+GL+  P+ A + ++KNLR+C DCH+ ++
Sbjct: 616 YTPDIGAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVR 675

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LISK+  R IVVRD NRFHHF++G CSC DYW
Sbjct: 676 LISKVTNRVIVVRDANRFHHFRDGRCSCLDYW 707



 Score =  243 bits (619), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 145/492 (29%), Positives = 255/492 (51%), Gaps = 12/492 (2%)

Query: 97  GRQVHCECVKSGFARDVNV--STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
           G+ +H   + +  A + ++    SL++ Y + N V     +FD M E NVVSW++L++GY
Sbjct: 48  GKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGY 107

Query: 155 ARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
             N  + +V+ L   M  EG + PN +  +  +    D G V    Q H +++K G    
Sbjct: 108 LLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFH 167

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V NAL+SMY K  +V+DA  V++ +   D + +NS+++  V N    E  E   +M  
Sbjct: 168 NYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVS 227

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +  + TFV+   LCA+ K+LRL   +H ++L + ++ D  + + ++  Y KCGK   
Sbjct: 228 ESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLM 287

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F  ++  ++VV WTA+++   QNG  + A+N F +M +E V+ N FTY+++L A  
Sbjct: 288 ARGVFDGLQS-RNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACA 346

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +S  +    +H H  K+ ++    VG AL+N Y K G ++ A KVF  +  +DI+ W+A
Sbjct: 347 GLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNA 406

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ G++  G  + A+ +++ + +    PN  TF+ V++AC       E     H    + 
Sbjct: 407 MICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQF 466

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI--CGYAQ-HGHTKKA 565
            +   L   + +V++ SK G +  A    +    K D+V+W +++  C   Q +G  +  
Sbjct: 467 GVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWV 526

Query: 566 LEVFKEMRRQDL 577
            E   EM   D+
Sbjct: 527 AEFVLEMDPNDV 538



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 203/440 (46%), Gaps = 17/440 (3%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY+K +Q     +LFDR P+RN V ++ L+  Y  +    + + L   +   G       
Sbjct: 75  FYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEY 134

Query: 81  LSSVLKTCGCLFDHVF-GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           + ++  +  C    V  GRQ H   +K+GF+    V  +LV +Y + + V+D   V++++
Sbjct: 135 ILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEV 194

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
             +++V++ S+LS    N      LE+   M  E +K +  TF     + A    +   +
Sbjct: 195 PVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGL 254

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            VH  ++ +  E    V +A+I+MY K      AR VFDG++ R+ + W +++A    N 
Sbjct: 255 HVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNG 314

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   F+ M     +    T+  ++  CA     R    LH    K+G  F H++  
Sbjct: 315 CFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSG--FKHHVMV 372

Query: 320 G--LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
           G  L+  Y+K G +E A K+FS M   +D+++W AMI G   +G    A+  F  M    
Sbjct: 373 GNALINMYAKSGDIEAAKKVFSDMMH-RDIITWNAMICGFSHHGLGKKALLVFQDMLAAE 431

Query: 378 VRPNGFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
             PN  T++ +L+A   +   Q     +H  + +   +      T +++   K G L+EA
Sbjct: 432 EHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEA 491

Query: 433 AKVFELIDEK-DIVAWSAML 451
                    K D+VAW  +L
Sbjct: 492 RNFMRTAPVKWDVVAWRTLL 511



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 7/327 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +++  P  + V YN +L     +   +E L +   +    +     T  +    C  L D
Sbjct: 190 VWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKD 249

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  VH + + S    D  VS++++++Y +       R VFD +   NVV WT++++ 
Sbjct: 250 LRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMAS 309

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
             +N   +  L LF +M+ E +K N FT++ +L   A          +H    K+G +  
Sbjct: 310 CFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHH 369

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V NALI+MY KS  +  A+ VF  M  RD ITWN+M+ G+  + L  +A   F +M  
Sbjct: 370 VMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLA 429

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQ----LHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           A       TF  V+  C     L L ++    LH  + + G+       T ++   SK G
Sbjct: 430 AEEHPNYVTFTGVLSACG---HLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTG 486

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISG 356
           ++ +A           DVV+W  +++ 
Sbjct: 487 QLNEARNFMRTAPVKWDVVAWRTLLNA 513


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/658 (35%), Positives = 378/658 (57%), Gaps = 21/658 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  ++  G +    +   LI        +  AR VFD +       WN+++ GY  N 
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A   ++NM LA       TF  ++K C+    L++ R +H+QV + G D D  ++ 
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 320 GLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           GL+  Y+KC ++  A  +F  +    + +VSWTA++S + QNG    A+  F  M +  V
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDV 218

Query: 379 RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           +P+      +L A   +   +    +HA ++K   E    +  +L   Y K G +  A  
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F+ +   +++ W+AM++GYA+ G    A+ ++ ++ ++ V+P+  + +S I+AC A   
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC-AQVG 337

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           ++EQ +  +    ++   + + +SSAL+ M++K G++E A  VF R   RD+V W++MI 
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY  HG  ++A+ +++ M R  +  + +TF+G++ AC H+G+V EG  +F++M  +H I 
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKIN 456

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  +HY+C++DL  RAG L++A ++I  MP     TVW  +L+AC+              
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L S+ P ++  YV LSN+YAA   W   A VR  M ++ + K+ G SW+EV+ +  +F  
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           GD SHP+  +I  ++E + +RLK+ G+  +    L D++DE  E  L  HSER+AIA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGL 636

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++TP G PL+I KNLR C +CH   KLISKL  R+IVVRDTNRFHHFK+G+CSCGDYW
Sbjct: 637 ISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 239/473 (50%), Gaps = 9/473 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +Q+H   +  G      + T L+       ++   R+VFDD+    +  W +++ GY+RN
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 L ++  MQ+  + P+SFTF  +L   +    +     VH  V + G +    V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 218 NALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           N LI++Y K + +  AR VF+G  + +R  ++W ++V+ Y  N   MEA E F++M    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            +      VSV+      ++L+  R +H+ V+K G++ + ++   L   Y+KCG++  A 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F  M+   +++ W AMISG+ +NG    A++ F +M  + VRP+  + +  ++A   V
Sbjct: 278 ILFDKMKS-PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              +    ++ ++ +++Y     + +AL++ + K G ++ A  VF+   ++D+V WSAM+
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            GY   G    A+ +YR +   GV PN+ TF  ++ AC   S  V +G  F       K+
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH-SGMVREGWWFFNLMADHKI 455

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTK 563
           N      + ++ +  + G+++ A EV K    +  V+ W +++    +H H +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 203/432 (46%), Gaps = 14/432 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P+     +N ++  Y R++  Q+AL ++  ++   +     T   +LK C  L
Sbjct: 73  RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--DMNESNVVSWTS 149
                GR VH +  + GF  DV V   L+ LY +   +   R VF+   + E  +VSWT+
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++S YA+N      LE+F  M+   +KP+     +VL        +     +H  V+K G
Sbjct: 193 IVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E+   +  +L +MY K   V  A+ +FD M+  + I WN+M++GY  N    EA + F+
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M          +  S I  CA    L  AR ++  V ++    D  I + L+  ++KCG
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A  +F    + +DVV W+AMI G+  +G    A++ +  M R GV PN  T+  +L
Sbjct: 373 SVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431

Query: 390 TA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-E 441
            A       +     F + A       ++ ++    LL    + G LD+A +V + +  +
Sbjct: 432 MACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLG---RAGHLDQAYEVIKCMPVQ 488

Query: 442 KDIVAWSAMLAG 453
             +  W A+L+ 
Sbjct: 489 PGVTVWGALLSA 500



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 152/328 (46%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P+R  V +  ++  Y ++    EAL +F  +R++ +      L SVL    CL D   GR
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
            +H   VK G   + ++  SL  +Y +   V   + +FD M   N++ W +++SGYA+N 
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                +++FH M  + ++P++ + ++ +   A  G +  A  ++  V ++       + +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI M+ K   V  AR VFD   DRD + W++M+ GY  +    EA   +  M   G   
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              TF+ ++  C  +  +R      + +  + I+        ++    + G ++ A ++ 
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLA 366
             M     V  W A++S   ++  ++L 
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELG 510



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 147/302 (48%), Gaps = 33/302 (10%)

Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           T  G+  + F  S+I +A       Q+HA ++    + S  + T L++A    G +  A 
Sbjct: 14  TNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFAR 73

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF+ +    I  W+A++ GY++    + A+ +Y  +    V P+ FTF  ++ AC+  S
Sbjct: 74  QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK--RQRKRDLVSWNS 551
             ++ G+  HA   +   +  + V + L+ +Y+K   + SA  VF+     +R +VSW +
Sbjct: 134 -HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT-----------HAGLVDEG 600
           ++  YAQ+G   +ALE+F  MR+ D++ D +  + V+ A T           HA +V  G
Sbjct: 193 IVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252

Query: 601 QQY-FDIMVNEHHIY------------------PTMEHYSCMVDLYSRAGMLEKAMDIIN 641
            +   D++++ + +Y                  P +  ++ M+  Y++ G   +A+D+ +
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312

Query: 642 RM 643
            M
Sbjct: 313 EM 314


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/658 (35%), Positives = 378/658 (57%), Gaps = 21/658 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  ++  G +    +   LI        +  AR VFD +       WN+++ GY  N 
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A   ++NM LA       TF  ++K C+    L++ R +H+QV + G D D  ++ 
Sbjct: 99  HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158

Query: 320 GLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           GL+  Y+KC ++  A  +F  +    + +VSWTA++S + QNG    A+  F QM +  V
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218

Query: 379 RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           +P+      +L A   +   +    +HA ++K   E    +  +L   Y K G +  A  
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F+ +   +++ W+AM++GYA+ G    A+ ++ ++ ++ V+P+  + +S I+AC A   
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC-AQVG 337

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           ++EQ +  +    ++   + + +SSAL+ M++K G++E A  VF R   RD+V W++MI 
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY  HG  ++A+ +++ M R  +  + +TF+G++ AC H+G+V EG  +F+ M  +H I 
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKIN 456

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  +HY+C++DL  RAG L++A ++I  MP     TVW  +L+AC+              
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L S+ P ++  YV LSN+YAA   W   A VR  M ++ + K+ G SW+EV+ +  +F  
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           GD SHP+  +I  ++E + +RLK+ G+  +    L D++DE  E  L  HSER+AIA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGL 636

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++TP G PL+I KNLR C +CH   KLISKL  R+IVVRDTNRFHHFK+G+CSCGDYW
Sbjct: 637 ISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 238/473 (50%), Gaps = 9/473 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +Q+H   +  G      + T L+       ++   R+VFDD+    +  W +++ GY+RN
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 L ++  MQ+  + P+SFTF  +L   +    +     VH  V + G +    V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 218 NALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           N LI++Y K + +  AR VF+G  + +R  ++W ++V+ Y  N   MEA E F+ M    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            +      VSV+      ++L+  R +H+ V+K G++ + ++   L   Y+KCG++  A 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F  M+   +++ W AMISG+ +NG    A++ F +M  + VRP+  + +  ++A   V
Sbjct: 278 ILFDKMKS-PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              +    ++ ++ +++Y     + +AL++ + K G ++ A  VF+   ++D+V WSAM+
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            GY   G    A+ +YR +   GV PN+ TF  ++ AC   S  V +G  F       K+
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH-SGMVREGWWFFNRMADHKI 455

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTK 563
           N      + ++ +  + G+++ A EV K    +  V+ W +++    +H H +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 177/362 (48%), Gaps = 3/362 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P+     +N ++  Y R++  Q+AL ++  ++   +     T   +LK C  L
Sbjct: 73  RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--DMNESNVVSWTS 149
                GR VH +  + GF  DV V   L+ LY +   +   R VF+   + E  +VSWT+
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++S YA+N      LE+F +M+   +KP+     +VL        +     +H  V+K G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E+   +  +L +MY K   V  A+ +FD M+  + I WN+M++GY  N    EA + F+
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M          +  S I  CA    L  AR ++  V ++    D  I + L+  ++KCG
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A  +F    + +DVV W+AMI G+  +G    A++ +  M R GV PN  T+  +L
Sbjct: 373 SVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431

Query: 390 TA 391
            A
Sbjct: 432 MA 433



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 153/328 (46%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P+R  V +  ++  Y ++    EAL +F  +R++ +      L SVL    CL D   GR
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
            +H   VK G   + ++  SL  +Y +   V   + +FD M   N++ W +++SGYA+N 
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                +++FH M  + ++P++ + ++ +   A  G +  A  ++  V ++       + +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI M+ K   V  AR VFD   DRD + W++M+ GY  +    EA   +  M   G   
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              TF+ ++  C  +  +R      +++  + I+        ++    + G ++ A ++ 
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLA 366
             M     V  W A++S   ++  ++L 
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELG 510



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 148/302 (49%), Gaps = 33/302 (10%)

Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           T  G+  + F  S+I +A       Q+HA ++    + S  + T L++A    G +  A 
Sbjct: 14  TNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFAR 73

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF+ +    I  W+A++ GY++    + A+ +Y  +    V P+ FTF  ++ AC+  S
Sbjct: 74  QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK--RQRKRDLVSWNS 551
             ++ G+  HA   +   +  + V + L+ +Y+K   + SA  VF+     +R +VSW +
Sbjct: 134 -HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT-----------HAGLVDEG 600
           ++  YAQ+G   +ALE+F +MR+ D++ D +  + V+ A T           HA +V  G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252

Query: 601 QQY-FDIMVNEHHIY------------------PTMEHYSCMVDLYSRAGMLEKAMDIIN 641
            +   D++++ + +Y                  P +  ++ M+  Y++ G   +A+D+ +
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312

Query: 642 RM 643
            M
Sbjct: 313 EM 314


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 250/688 (36%), Positives = 380/688 (55%), Gaps = 20/688 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K CG L +    + VH      GF  D+ + +SL+ LY     + D + +FD++
Sbjct: 179 TFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDEL 238

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              + + W  +L+GY +N   +  L  F  M+   +KPNS +F  +L V A  GIV   +
Sbjct: 239 PVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGI 298

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H +VI++G E   +V N +I+MY K   + DAR +FD M   D++TWN ++AGYV N 
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNG 358

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   F  M  +G +L   TF S +     +  L+  +++HS ++++G+ FD  +++
Sbjct: 359 FTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKS 418

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y K G +E A K F     + DV   TAMISG++ NG    A+N F  + +EG+ 
Sbjct: 419 ALVDIYFKGGDVEMACKTFQ-QNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMV 477

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN  T + +L A  A++      ++H  I+K   E    VG+++   Y K G LD A + 
Sbjct: 478 PNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQF 537

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  +  KD V W+ M+  ++Q G  E A+ ++RQ+ + G K +  + S+ ++AC A   A
Sbjct: 538 FRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSAC-ANYPA 596

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H   ++    +   V+S L+ MYSK G +  A  VF     ++ VSWNS+I  
Sbjct: 597 LYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAA 656

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HG  ++ L++F EM    ++ D +TF+ +++AC HAGLVDEG  YF  M  E+ I  
Sbjct: 657 YGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICA 716

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            MEH++CMVDLY RAG L +A D I  MPF   A  W ++L ACR              L
Sbjct: 717 RMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHL 776

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + L P++S  YVLLSN++A  G W+   +VR LM ++ V+K  GYSWI+V   T+ F A 
Sbjct: 777 VELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAA 836

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKP 749
           D  HPQS +IY  L+ L   L+  GY P
Sbjct: 837 DGCHPQSVEIYLILKNLLLELRKHGYVP 864



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/565 (28%), Positives = 286/565 (50%), Gaps = 8/565 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQ+H + +  G    + + + ++ +Y+   + +D   +F  +     + W  L+ G++  
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              D  L  F RM    + P+ +TF  V+        V     VH +    G  +   + 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           ++LI +Y  +  + DA+ +FD +  RD I WN M+ GYV N     A  TF  M  +  +
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               +FV ++ +CAT   +R   QLH  V+++G + D  +   ++  YSKCG + DA KI
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F +M +  D V+W  +I+G++QNG  D AV  F  M   GV+ +  T++  L +      
Sbjct: 336 FDIMPQ-TDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGS 394

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                +VH++I++        + +AL++ Y K G ++ A K F+     D+   +AM++G
Sbjct: 395 LKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISG 454

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y   G    A+ ++R L  EG+ PN  T +SV+ AC A  A+++ GK+ H   +K  L N
Sbjct: 455 YVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAA-LASLKLGKELHCDILKKGLEN 513

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
              V S++  MY+K G ++ A + F+R   +D V WN MI  ++Q+G  + A+++F++M 
Sbjct: 514 VCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMG 573

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
               +FD ++    ++AC +   +  G++    +V    I  T    S ++D+YS+ G L
Sbjct: 574 TSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVA-STLIDMYSKCGKL 632

Query: 634 EKAMDIINRMPFAASATVWRTVLAA 658
             A  + + M +    + W +++AA
Sbjct: 633 ALARSVFDMMDWKNEVS-WNSIIAA 656



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 9/364 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL----FGSTLSSVLKT 87
           + +FD  PQ + V +N L+  Y ++    EA+ LF  +   G+ L    F S L SVLK+
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKS 392

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
            G L    + ++VH   V+ G   DV + ++LVD+Y +  +VE   + F      +V   
Sbjct: 393 -GSL---KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVC 448

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T+++SGY  N +N   L LF  +  EG+ PN  T ++VL   A    +    ++H  ++K
Sbjct: 449 TAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILK 508

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G E V  V +++  MY KS  +  A   F  M  +DS+ WN M+  +  N     A + 
Sbjct: 509 KGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDL 568

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  MG +G +    +  + +  CA    L   ++LH  V++N    D  + + L+  YSK
Sbjct: 569 FRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSK 628

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CGK+  A  +F MM + K+ VSW ++I+ +  +G     ++ F +M   G++P+  T+ +
Sbjct: 629 CGKLALARSVFDMM-DWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLV 687

Query: 388 ILTA 391
           I++A
Sbjct: 688 IMSA 691



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 153/326 (46%), Gaps = 23/326 (7%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           Y  + L+ EALNLF  + + G+     T++SVL  C  L     G+++HC+ +K G    
Sbjct: 455 YVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENV 514

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
             V +S+  +Y ++  ++   + F  M   + V W  ++  +++N   +  ++LF +M  
Sbjct: 515 CQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGT 574

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G K +S + S  L   A+   +    ++H  V++N     T V + LI MY K   +  
Sbjct: 575 SGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLAL 634

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR+VFD M+ ++ ++WNS++A Y  +    E  + F+ M  AG +    TF+ ++  C  
Sbjct: 635 ARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACG- 693

Query: 293 TKELRLARQLHSQVLKNGIDF------DHNI-----RTGLMV-AYSKCGKMEDASKIFSM 340
                     H+ ++  GI +      ++ I         MV  Y + G++ +A      
Sbjct: 694 ----------HAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKS 743

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLA 366
           M    D  +W +++     +G ++LA
Sbjct: 744 MPFTPDAGTWGSLLGACRLHGNVELA 769



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 12/227 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            F R P ++ V +N ++  + ++   + A++LF  +   G      +LS+ L  C     
Sbjct: 537 FFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPA 596

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             +G+++HC  V++ F  D  V+++L+D+Y +   +   R VFD M+  N VSW S+++ 
Sbjct: 597 LYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAA 656

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  +      L+LFH M   GI+P+  TF  ++      G+V   +     + +  G   
Sbjct: 657 YGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYG--- 713

Query: 214 TSVC------NALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
             +C        ++ +Y ++  + +A      M    D+ TW S++ 
Sbjct: 714 --ICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLG 758


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/731 (34%), Positives = 393/731 (53%), Gaps = 70/731 (9%)

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           R  N+E  R  F+ M      S+ +LL+GY RN++ D  L LF RM    +         
Sbjct: 29  RAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL--------- 79

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS-MYLKSKMVRDARAVFDGMEDR 243
                                         +  NALIS + L+ + + DA A    +   
Sbjct: 80  ------------------------------ASYNALISGLSLRRQTLPDAAAALASIPFP 109

Query: 244 DSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
            S+ ++ S++ GYV + L  +A   F  M     E    ++  ++        +  AR+L
Sbjct: 110 PSVVSFTSLLRGYVRHGLLADAIRLFQQM----PERNHVSYTVLLGGLLDAGRVNEARRL 165

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
             ++     D D    T ++  Y + G++ +A  +F  M + ++VVSWTAMISG+ QNG 
Sbjct: 166 FDEM----PDRDVVAWTAMLSGYCQAGRITEARALFDEMPK-RNVVSWTAMISGYAQNGE 220

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNA 422
           ++LA   F  M       N  +++ +L         +  A +     E   +   A++  
Sbjct: 221 VNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVG 276

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           + ++G++D A  VFE + E+D   WSAM+  Y Q      A+  +R++   GV+PN  + 
Sbjct: 277 FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            S++  C A  A ++ G++ HA  ++   +  +   SAL+TMY K GN++ A  VF    
Sbjct: 337 ISILTVCAA-LAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE 395

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D+V WNSMI GYAQHG  ++AL +F +MR   +  DGIT+IG +TAC++ G V EG++
Sbjct: 396 PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGRE 455

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-- 660
            F+ M     I P  EHYSCMVDL  R+G++E+A D+I  MP    A +W  ++ ACR  
Sbjct: 456 IFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMH 515

Query: 661 ------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                       L+ L+P ++  YVLLS++Y + G W++ +++RK ++ R + K  G SW
Sbjct: 516 RNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSW 575

Query: 709 IEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           IE   + + F +GD+ +HP+   I   LE+L   L ++GY  D S+VL DID+E K   L
Sbjct: 576 IEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSL 635

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
             HSER A+A+GL+  P G P++++KNLRVCGDCH+ IKLI+K+  R+I++RD NRFHHF
Sbjct: 636 RYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHF 695

Query: 828 KEGLCSCGDYW 838
           K+G CSC DYW
Sbjct: 696 KDGFCSCRDYW 706



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 213/487 (43%), Gaps = 77/487 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-----------------LGIRRLGL 74
           ++ F+  P R    YN LL  Y R+ L   AL LF                 L +RR  L
Sbjct: 37  RAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSLRRQTL 96

Query: 75  PLFGSTLSSV---------------------LKTCGCLFDHVFGR-QVHCECVKSGFA-- 110
           P   + L+S+                     L     LF  +  R  V    +  G    
Sbjct: 97  PDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDA 156

Query: 111 ---------------RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
                          RDV   T+++  Y +   + + R +FD+M + NVVSWT+++SGYA
Sbjct: 157 GRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYA 216

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           +N   +   +LF  M     + N  +++ +L      G V  A ++   +     E   +
Sbjct: 217 QNGEVNLARKLFEVMP----ERNEVSWTAMLVGYIQAGHVEDAAELFNAM----PEHPVA 268

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
            CNA++  + +  MV  A+ VF+ M +RD  TW++M+  Y  NE  MEA  TF  M   G
Sbjct: 269 ACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRG 328

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 + +S++ +CA    L   R++H+ +L+   D D    + L+  Y KCG ++ A 
Sbjct: 329 VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK 388

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F    E KD+V W +MI+G+ Q+G  + A+  F  M   G+ P+G TY   LTA    
Sbjct: 389 RVFHTF-EPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYT 447

Query: 396 SPFQVHAHIIKT-NYEKSFSVG----TALLNAYVKKGILDEAAKVFELID----EKDIVA 446
              +    I  +     S   G    + +++   + G+++EA   F+LI     E D V 
Sbjct: 448 GKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEA---FDLIKNMPVEPDAVI 504

Query: 447 WSAMLAG 453
           W A++  
Sbjct: 505 WGALMGA 511



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 11/128 (8%)

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +A +   ++ GNIE A   F+    R   S+N+++ GY ++     AL +F+ M  +DL 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI--YPTMEHYSCMVDLYSRAGMLEKA 636
               ++  +I+     GL    Q   D       I   P++  ++ ++  Y R G+L  A
Sbjct: 81  ----SYNALIS-----GLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADA 131

Query: 637 MDIINRMP 644
           + +  +MP
Sbjct: 132 IRLFQQMP 139


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 226/593 (38%), Positives = 367/593 (61%), Gaps = 22/593 (3%)

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E    M + G E+    + +++  C   + LR  +++H+ ++K        +RT L++ Y
Sbjct: 37  EALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFY 96

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            KC  +EDA K+   M E K+VVSWTAMIS + Q G    A++ F +M R   +PN FT+
Sbjct: 97  GKCDCLEDARKVLDEMPE-KNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTF 155

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +LT+    S      Q+H  I+K NY+    VG++LL+ Y K G ++EA ++FE + E
Sbjct: 156 ATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPE 215

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+V+ +A++AGYAQ+G  E A++++++L SEG++PN  T++S++ A +   A ++ GKQ
Sbjct: 216 RDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSG-LALLDHGKQ 274

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H   ++ +L     + ++L+ MYSK GN+  A  +F    +R  +SWN+M+ GY++HG 
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGL 334

Query: 562 TKKALEVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMV-NEHHIYPTMEH 619
            ++ LE+F+ MR +  ++ D +T + V++ C+H  + D G   +D MV  E+ I P  EH
Sbjct: 335 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEH 394

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y C+VD+  RAG +++A + I RMP   +A V  ++L ACR              LI ++
Sbjct: 395 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIE 454

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P ++  YV+LSN+YA+ G W++   VR +M  + V KE G SWI+ +   + F A D +H
Sbjct: 455 PENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 514

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+  ++ +K++E+S ++K AGY PD S VL D+D+E KE +L  HSE+LA+ FGL+ T  
Sbjct: 515 PRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGE 574

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G P+++ KNLR+C DCH   K+ SK+  R++ +RD NRFH   +G+CSCGDYW
Sbjct: 575 GIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 178/358 (49%), Gaps = 6/358 (1%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F  SP  + ++  R + + C +   QEAL   L +  LG  +      ++L  C      
Sbjct: 12  FSSSPN-SVLQTFRPISQLCSNGRLQEAL---LEMVMLGPEIGFHCYDALLNACLDKRAL 67

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G++VH   +K+ +     + T L+  Y + + +ED R+V D+M E NVVSWT+++S Y
Sbjct: 68  REGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRY 127

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           ++   +   L +F  M     KPN FTF+TVL        +A   Q+H +++K   +   
Sbjct: 128 SQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHI 187

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V ++L+ MY K+  + +AR +F+ + +RD ++  +++AGY    L  EA E F  +   
Sbjct: 188 FVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSE 247

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G      T+ S++   +    L   +Q H  VL+  + F   ++  L+  YSKCG +  A
Sbjct: 248 GMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 307

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTA 391
            ++F  M E +  +SW AM+ G+ ++G     +  F  M  E  V+P+  T   +L+ 
Sbjct: 308 QRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 364



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 143/266 (53%), Gaps = 16/266 (6%)

Query: 18  PPKSLRSP---FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI 69
           P   LR+    FY K D     + + D  P++N V +  ++  Y +     EAL++F  +
Sbjct: 84  PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEM 143

Query: 70  RRL-GLP---LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR 125
            R  G P    F + L+S ++  G       G+Q+H   VK  +   + V +SL+D+Y +
Sbjct: 144 MRSDGKPNEFTFATVLTSCIRASGL----ALGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 199

Query: 126 TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
              +E+ R +F+ + E +VVS T++++GYA+  +++  LE+F R+Q EG++PN  T++++
Sbjct: 200 AGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASL 259

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L  L+   ++    Q H  V++        + N+LI MY K   +  A+ +FD M +R +
Sbjct: 260 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTA 319

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNM 271
           I+WN+M+ GY  + L  E  E F  M
Sbjct: 320 ISWNAMLVGYSKHGLGREVLELFRLM 345



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 10/171 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           + +F+  P+R+ V    ++  Y +  L +EAL +F  ++  G+     T +S+L      
Sbjct: 207 REIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGL 266

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L DH  G+Q HC  ++        +  SL+D+Y +  N+   +R+FD+M E   +SW +
Sbjct: 267 ALLDH--GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNA 324

Query: 150 LLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVL-----GVLADEGI 194
           +L GY+++ +   VLELF  M+ E  +KP++ T   VL     G + D G+
Sbjct: 325 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGL 375


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/699 (36%), Positives = 401/699 (57%), Gaps = 37/699 (5%)

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
           EG K  S  +  +L    D+ +V+ A ++H  ++K G      +   L+++Y K   +  
Sbjct: 63  EGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMET 122

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFD +  R+ ++W +++ GYV +     A + F  M  AGA  T  T  + +   + 
Sbjct: 123 ARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSD 182

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
                L +Q+H   +K  I+FD +I   L   YSKCG +E A K F  +R+ K+V+SWT 
Sbjct: 183 LHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRD-KNVISWTT 241

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
           +IS    NG     + FF +M  E V PN FT +  L+    +       Q+H+  IK  
Sbjct: 242 VISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLG 301

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD--------- 459
           +E +  +  +++  Y+K G + EA K+F+ ++   +V W+AM+AG+A++ D         
Sbjct: 302 FESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAH 361

Query: 460 ---TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
              TE A+ I+ +L   G+KP+ FTFSSV++   +   A+EQG+Q HA +IK    + + 
Sbjct: 362 QCGTE-ALSIFLKLNRSGMKPDLFTFSSVLSV-CSSLVALEQGEQVHAQTIKTGFLSDVV 419

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V +ALV MY+K G+IE AS+ F     R L+SW SMI GYAQ+G  ++AL +F++MR   
Sbjct: 420 VGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAG 479

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +  + ITF+GV++AC+HAG+VDE   YF +M NE+ I P M+HY+C++D++ R G L++A
Sbjct: 480 VRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEA 539

Query: 637 MDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
            D I  M    +  +W  ++A CR              L++L+P D+  Y LL NMY + 
Sbjct: 540 FDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSA 599

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G W+E +RVRK+M + K+ +   +SWI +K+K YSF     SH QS ++Y  L  L  + 
Sbjct: 600 GKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKA 659

Query: 743 KDAGYKPDTSY--VLQDIDDEHKEAILS--QHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
           K  GY+ + S     ++ D + ++A+ S   HSE+LAIAFGL+ T    P+++ K++ +C
Sbjct: 660 KSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTKSISMC 719

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
            DCH  I++IS L  R+I++RD+ R H F  G CSCGD+
Sbjct: 720 RDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 236/480 (49%), Gaps = 33/480 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P+RN V +  L+  Y  DS  + A+ +F  +   G      TL + L     L
Sbjct: 124 RKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDL 183

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +K     D ++  SL  LY +  ++E   + F  + + NV+SWT+++
Sbjct: 184 HSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVI 243

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S +  N      L+ F  M  E ++PN FT ++ L +      +    Q+H++ IK G E
Sbjct: 244 SAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFE 303

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY-----------VTNEL 260
               + N+++ +YLK   + +A+ +FD ME    +TWN+M+AG+             ++ 
Sbjct: 304 SNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQC 363

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA   F  +  +G +    TF SV+ +C++   L    Q+H+Q +K G   D  + T 
Sbjct: 364 GTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTA 423

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG +E ASK F  M  ++ ++SWT+MI+G+ QNG    A+  F  M   GVRP
Sbjct: 424 LVNMYNKCGSIERASKAFVEM-SIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRP 482

Query: 381 NGFTYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDE 431
           N  T+  +L+A         A+  FQ    ++K  Y+ +  +     L++ +V+ G LDE
Sbjct: 483 NKITFVGVLSACSHAGMVDEALDYFQ----MMKNEYKITPVMDHYACLIDMFVRLGRLDE 538

Query: 432 AAKVFELIDEKDI----VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
           A   F+ I E D+      WS ++AG    G  E       QL +   K  E T++ ++N
Sbjct: 539 A---FDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTE-TYNLLLN 594


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/817 (32%), Positives = 433/817 (52%), Gaps = 63/817 (7%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRV 135
           S L+  L+ C  L      +Q+HC+  K+G  +  +  T LV+      + E     R+ 
Sbjct: 26  SCLNESLRCCKTLNQL---KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKA 82

Query: 136 F-----DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
           F     D  ++  +    SL+ GY+   +    + L+ RM V G+ PN +TF  VL    
Sbjct: 83  FELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCT 142

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
                   +QVH  V+K G E    + N LI  Y +   +     VF+GM +R+ ++W S
Sbjct: 143 KIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTS 202

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           ++ GY   +   EA   F  M  AG   +  T V VI  CA  ++L +  ++ + + + G
Sbjct: 203 LICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELG 262

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           +  +  +   L+  Y KCG ++ A ++F    + +++V +  ++S + + G    A+   
Sbjct: 263 LKLNKVMVNALVDMYMKCGAIDAAKRLFDECVD-RNLVLYNTILSNYARQGLAREALAIL 321

Query: 371 CQMTREGVRPNGFT-YSIILTAQPAVSPFQ---VHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M ++G RP+  T  S I  +   V  F     H ++I+   E   S+G  +++ Y+K 
Sbjct: 322 DEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKC 381

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA----------------------- 463
           G  + A +VF+L+  K +V+W+++ AG+ + GD E A                       
Sbjct: 382 GKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLV 441

Query: 464 --------VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
                   ++++R++  EG+K +  T   + +AC    A  E  K  H    K  +   +
Sbjct: 442 QKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAP-ELAKWVHTYIEKNGIPCDM 500

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            +++ALV M+++ G+ +SA +VF +  +RD+ +W + I   A  G+ + A  +F +M  Q
Sbjct: 501 RLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQ 560

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            ++ D + F+ V+TAC+H G V++G   F +M  +H I P +EHY CMVDL  RAG+L +
Sbjct: 561 GVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLRE 619

Query: 636 AMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAA 681
           A D+I  MP   +  VW ++LAACR              +  L P  + ++VLLSN+YA+
Sbjct: 620 AFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYAS 679

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
            G W + ARVR  + ++ V+K  G S ++V    + F +GD SHP+   I   L+E++ R
Sbjct: 680 AGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCR 739

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
             DAG+ PD S VL D+D++ KE +LS+HSE+LAIAFGL+AT    P+++VKNLR+C DC
Sbjct: 740 FSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDC 799

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           H+  K+ S +  R+I+VRD NRFH F++GLCSC DYW
Sbjct: 800 HSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 277/604 (45%), Gaps = 48/604 (7%)

Query: 3   LSPALKSLINPQTK-QPPKSLRSPFYSKKDQSLFD---RSPQRNFVEYNRLLFEYCRDSL 58
           +   L  L+N   +   P+SL    Y++K   LF    RS    F+  N L+  Y    L
Sbjct: 56  IPSTLTKLVNAGAEIASPESLD---YARKAFELFKEDVRSDDALFM-LNSLIRGYSSAGL 111

Query: 59  HQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTS 118
            +EA+ L++ +  LG+     T   VL  C  +     G QVH   VK G   DV +   
Sbjct: 112 GREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNC 171

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+  Y    +++ G +VF+ M+E NVVSWTSL+ GYAR       + LF  M   GI+P+
Sbjct: 172 LIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPS 231

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           S T   V+   A    +    +V   + + G ++   + NAL+ MY+K   +  A+ +FD
Sbjct: 232 SVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFD 291

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
              DR+ + +N++++ Y    L  EA    + M   G    R T +S I   A   +L  
Sbjct: 292 ECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFY 351

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +  H  V++NG++   +I   ++  Y KCGK E A ++F +M   K VVSW ++ +G +
Sbjct: 352 GKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSN-KTVVSWNSLTAGFI 410

Query: 359 QNGAIDL-------------------------------AVNFFCQMTREGVRPNGFTYSI 387
           +NG ++                                A+  F +M  EG++ +  T   
Sbjct: 411 RNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMG 470

Query: 388 ILTA-----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           I +A      P ++ + VH +I K        + TAL++ + + G    A +VF  + E+
Sbjct: 471 IASACGYLGAPELAKW-VHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER 529

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+ AW+A +   A  G+ EGA  ++ Q+  +GVKP+   F  V+ AC+     VEQG   
Sbjct: 530 DVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH-GGQVEQGLHI 588

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGH 561
            +      ++  +     +V +  + G +  A ++ K    + + V W S++     H +
Sbjct: 589 FSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKN 648

Query: 562 TKKA 565
            + A
Sbjct: 649 VEMA 652


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/532 (41%), Positives = 339/532 (63%), Gaps = 54/532 (10%)

Query: 325 YSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNFFCQMTREGVRP 380
           Y+KC   G ++D+ K+F  M E  +V+SWTA+I+ ++Q+G  D  A+  FC+M    V  
Sbjct: 2   YAKCAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFCKMISASVN- 59

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
                                             VG +L++ Y + G +++A K F+++ 
Sbjct: 60  ---------------------------------CVGNSLISMYARSGRMEDARKAFDILF 86

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           EK++V+++A++ GYA+   +E A  ++ ++   G+  + FTF+S+++   A   A+ +G+
Sbjct: 87  EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG-AASIGAMGKGE 145

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q H   +K    +  C+ +AL++MYS+ GNIE+A +VF     R+++SW SMI G+A+HG
Sbjct: 146 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 205

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
              +ALE+F +M     + + IT++ V++AC+H G++ EGQ++F+ M  EH I P MEHY
Sbjct: 206 FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY 265

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQP 666
           +CMVDL  R+G+L +AM+ IN MP  A A VWRT+L ACR              ++  +P
Sbjct: 266 ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEP 325

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            D A Y+LLSN++A+ G W++  ++RK M +R + KEAG SWIEV+N+ + F  G+ SHP
Sbjct: 326 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 385

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           Q+ QIY +L++L++++K+ GY PDT +VL DI++E KE  L QHSE++A+AFGL++T   
Sbjct: 386 QAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQS 445

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            P++I KNLRVCGDCHT IK IS    R+IVVRD+NRFHH K G+CSC DYW
Sbjct: 446 KPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 166/344 (48%), Gaps = 52/344 (15%)

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDR-VLELFHRMQVEGIKPNSFTFSTVL 186
           +V+D R+VF+ M E NV+SWT++++ Y ++   D+  +ELF +M                
Sbjct: 10  SVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM---------------- 53

Query: 187 GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI 246
                  I A+               V  V N+LISMY +S  + DAR  FD + +++ +
Sbjct: 54  -------ISAS---------------VNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 91

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           ++N++V GY  N    EAF  FN +   G  ++  TF S++   A+   +    Q+H ++
Sbjct: 92  SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 151

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           LK G   +  I   L+  YS+CG +E A ++F+ M E ++V+SWT+MI+G  ++G    A
Sbjct: 152 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM-EDRNVISWTSMITGFAKHGFATRA 210

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG-----TALLN 421
           +  F +M   G +PN  TY  +L+A   V           + Y++   V        +++
Sbjct: 211 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 270

Query: 422 AYVKKGILDEAAKVFELIDE----KDIVAWSAMLAGYAQIGDTE 461
              + G+L EA    E I+      D + W  +L      G+TE
Sbjct: 271 LLGRSGLLVEA---MEFINSMPLMADALVWRTLLGACRVHGNTE 311



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 130/253 (51%), Gaps = 1/253 (0%)

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
           V  SL+ +Y R+  +ED R+ FD + E N+VS+ +++ GYA+N  ++    LF+ +   G
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           I  ++FTF+++L   A  G +    Q+H  ++K G +    +CNALISMY +   +  A 
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            VF+ MEDR+ I+W SM+ G+  +     A E F+ M   G +    T+V+V+  C+   
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240

Query: 295 ELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
            +    +  +S   ++GI         ++    + G + +A +  + M  M D + W  +
Sbjct: 241 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 300

Query: 354 ISGHLQNGAIDLA 366
           +     +G  +L 
Sbjct: 301 LGACRVHGNTELG 313



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/360 (22%), Positives = 171/360 (47%), Gaps = 56/360 (15%)

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYV-TNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
           V D+R VF+ M + + ++W +++  YV + E   EA E F  M  A      ++ +S+  
Sbjct: 11  VDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVNCVGNSLISM-- 68

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
                                               Y++ G+MEDA K F ++ E K++V
Sbjct: 69  ------------------------------------YARSGRMEDARKAFDILFE-KNLV 91

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           S+ A++ G+ +N   + A   F ++   G+  + FT++ +L+   ++       Q+H  +
Sbjct: 92  SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 151

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K  Y+ +  +  AL++ Y + G ++ A +VF  ++++++++W++M+ G+A+ G    A+
Sbjct: 152 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 211

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC----SIKAKLNNALCVSSA 520
           +++ ++   G KPNE T+ +V++AC+      E  K F++      I  ++ +  C    
Sbjct: 212 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYAC---- 267

Query: 521 LVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT---KKALEVFKEMRRQD 576
           +V +  + G +  A E         D + W +++     HG+T   + A E+  E    D
Sbjct: 268 MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDD 327



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 2/222 (0%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD   ++N V YN ++  Y ++   +EA  LF  I   G+ +   T +S+L     +   
Sbjct: 82  FDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 141

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G Q+H   +K G+  +  +  +L+ +Y R  N+E   +VF++M + NV+SWTS+++G+
Sbjct: 142 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 201

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A++    R LE+FH+M   G KPN  T+  VL   +  G+++   +    + K  G V  
Sbjct: 202 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 261

Query: 215 SVCNA-LISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
               A ++ +  +S ++ +A    + M    D++ W +++  
Sbjct: 262 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 303


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/700 (35%), Positives = 390/700 (55%), Gaps = 34/700 (4%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M  EG    S  +  +L    + G +  A  +H  ++K G  V   V  +L+++Y++   
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
            +DAR +FD M +++ +TW +++ GY  N   + A E F  M   G   +  T   ++  
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C  +  + L +Q+H   +K G     +I   L   Y+K G +E   + F  + + K+V++
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPD-KNVIT 247

Query: 350 WTAMISGHLQN-GAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQPAVSPFQVHAHI 404
           WT MIS   ++    +L +N F  M +  V PN FT + ++    T+       QV    
Sbjct: 248 WTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFC 307

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG-- 462
            K     +  V  + +  Y++KG  +EA ++FE +++  ++ W+AM++G+AQI D+    
Sbjct: 308 FKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDD 367

Query: 463 ---------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
                    A+KI+R L    +KP+ FTFSS+++ C+    A+EQG+Q HA +IK    +
Sbjct: 368 LHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCST-MMALEQGEQIHAQTIKTGFLS 426

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V+SALV MY+K G IE A++ F     R LV+W SMI GY+QHG    A+++F++M 
Sbjct: 427 DVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMI 486

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
               + + ITF+ +++AC++AGLV+E  +YFD+M NE+HI P M+HY CM+D++ R G L
Sbjct: 487 LAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRL 546

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
           + A   I R  F  +  +W +++A C              RL+ L+P     YVLL NMY
Sbjct: 547 DDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMY 606

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
            +TG W++ ARVRKL     +      SWI +++K Y F A D SHPQS ++Y  LE L 
Sbjct: 607 ISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLL 666

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAI--LSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
            + K  GY+P  +  L D +++ K A   L  HSERLA+A GL+  P G  ++I KN+ +
Sbjct: 667 EKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITM 726

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           C DCH+ IK  S L  R+IVVRD+ R H FK+G CSCGD+
Sbjct: 727 CRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 243/486 (50%), Gaps = 18/486 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H   VK+G   D+ V+TSLV++YMR  N +D R +FD+M E NVV+WT+L++GY  N
Sbjct: 98  KALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLN 157

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 LE+F  M   G  P+ +T   +L        +    QVH   IK G   +TS+ 
Sbjct: 158 SQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIG 217

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME-AFETFNNMGLAGA 276
           N+L  +Y KS  +      F  + D++ ITW +M++    +E + E     F +M     
Sbjct: 218 NSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEV 277

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                T  SV+ LC T+ ++ L +Q+     K G   +  ++   M  Y + G+ E+A +
Sbjct: 278 MPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMR 337

Query: 337 IFSMMREMKDVVSWTAMISGHLQ---NGAIDL--------AVNFFCQMTREGVRPNGFTY 385
           +F  M E   V++W AMISG  Q   +   DL        A+  F  + R  ++P+ FT+
Sbjct: 338 LFEEM-EDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTF 396

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           S IL+    +       Q+HA  IKT +     V +AL+N Y K G ++ A K F  +  
Sbjct: 397 SSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPT 456

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           + +V W++M++GY+Q G    A++++  +   G KPNE TF S+++AC+      E  + 
Sbjct: 457 RTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRY 516

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
           F     +  +   +     ++ M+ + G ++ A    KR+  + +   W+S++ G   HG
Sbjct: 517 FDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHG 576

Query: 561 HTKKAL 566
           + + A 
Sbjct: 577 NMELAF 582



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 230/479 (48%), Gaps = 52/479 (10%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S+  ++LFD  P++N V +  L+  Y  +S    AL +F+ + +LG      TL  +L  
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C    +   G+QVH   +K G A   ++  SL  LY ++ N+E G R F  + + NV++W
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITW 248

Query: 148 TSLLSGYARNK-MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           T+++S  A ++   +  L LF  M    + PN FT ++V+ +      +    QV     
Sbjct: 249 TTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCF 308

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY------VTNEL 260
           K G      V N+ + +YL+     +A  +F+ MED   ITWN+M++G+        ++L
Sbjct: 309 KIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDL 368

Query: 261 H-----MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           H      +A + F ++  +  +    TF S++ +C+T   L    Q+H+Q +K G   D 
Sbjct: 369 HARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDV 428

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y+KCG +E A+K F  M   + +V+WT+MISG+ Q+G    A+  F  M  
Sbjct: 429 VVNSALVNMYNKCGCIEYATKAFVEM-PTRTLVTWTSMISGYSQHGRPHDAIQLFEDMIL 487

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            G +PN  T+                                +LL+A    G+++EA + 
Sbjct: 488 AGAKPNEITF-------------------------------VSLLSACSYAGLVEEAMRY 516

Query: 436 FELID-----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           F+++      E  +  +  M+  + ++G  + A   Y  +  +G +PNE  +SS++  C
Sbjct: 517 FDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDA---YAFIKRKGFEPNEAIWSSLVAGC 572



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 20/263 (7%)

Query: 11  INPQTKQPPKSLRSPFYSKKDQS-----LFDRSPQRNFVEYNRLL------FEYCRDSLH 59
           I   T  P K+     Y +K ++     LF+     + + +N ++       +  +D LH
Sbjct: 310 IGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLH 369

Query: 60  Q-----EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
                 +AL +F  + R  +     T SS+L  C  +     G Q+H + +K+GF  DV 
Sbjct: 370 ARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVV 429

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
           V+++LV++Y +   +E   + F +M    +V+WTS++SGY+++      ++LF  M + G
Sbjct: 430 VNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAG 489

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDA 233
            KPN  TF ++L   +  G+V  A++   M+      E +      +I M+++   + DA
Sbjct: 490 AKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDA 549

Query: 234 RAVF--DGMEDRDSITWNSMVAG 254
            A     G E  ++I W+S+VAG
Sbjct: 550 YAFIKRKGFEPNEAI-WSSLVAG 571


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/744 (35%), Positives = 418/744 (56%), Gaps = 25/744 (3%)

Query: 29   KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
            K  + LF      + V +N ++  + +      A+  F  +R+  +    STL SVL   
Sbjct: 278  KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337

Query: 89   GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            G + +   G  VH E +K G A ++ V +SLV +Y +   +E   +VF+ + E N V W 
Sbjct: 338  GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397

Query: 149  SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            +++ GYA N  + +V+ELF  M+  G   + FTF+++L   A    +    Q H+++IK 
Sbjct: 398  AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457

Query: 209  GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                   V NAL+ MY K   + DAR +F+ M DRD++TWN+++  YV +E   EAF+ F
Sbjct: 458  KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517

Query: 269  NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
              M L G     +   S +K C     L   +Q+H   +K G+D D +  + L+  YSKC
Sbjct: 518  KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577

Query: 329  GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            G ++DA K+FS + E   VVS  A+I+G+ QN  ++ AV  F +M   GV P+  T++ I
Sbjct: 578  GIIKDARKVFSSLPEWS-VVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATI 635

Query: 389  LTA----QPAVSPFQVHAHIIKTNYEKSFS-VGTALLNAYVKKGILDEAAKVF-ELIDEK 442
            + A    +      Q H  I K  +      +G +LL  Y+    + EA  +F EL   K
Sbjct: 636  VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK 695

Query: 443  DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
             IV W+ M++G++Q G  E A+K Y+++  +GV P++ TF +V+  C+  S ++ +G+  
Sbjct: 696  SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS-SLREGRAI 754

Query: 503  HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQHGH 561
            H+       +     S+ L+ MY+K G+++ +S+VF   R+R ++VSWNS+I GYA++G+
Sbjct: 755  HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814

Query: 562  TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
             + AL++F  MR+  +  D ITF+GV+TAC+HAG V +G++ F++M+ ++ I   ++H +
Sbjct: 815  AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874

Query: 622  CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPH 667
            CMVDL  R G L++A D I        A +W ++L ACR              LI L+P 
Sbjct: 875  CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934

Query: 668  DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
            +S+ YVLLSN+YA+ G W++   +RK+M DR VKK  GYSWI+V+ +T+ F AGD SH +
Sbjct: 935  NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994

Query: 728  SNQIYSKLEELSTRLK-DAGYKPD 750
              +I   LE+L   +K DA   PD
Sbjct: 995  IGKIEMFLEDLYDLMKDDAVVNPD 1018



 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 174/552 (31%), Positives = 276/552 (50%), Gaps = 43/552 (7%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ VH + +  G   +  +  ++VDLY +   V    + FD + E +V +W S+LS Y+ 
Sbjct: 79  GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                +VL  F  +    I PN FTFS VL   A E  V    Q+H  +IK G E  +  
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ MY K   + DAR VF+ + D +++ W  + +GYV   L  EA   F  M   G 
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                 FV+VI                                     Y + GK++DA  
Sbjct: 258 RPDHLAFVTVIN-----------------------------------TYIRLGKLKDARL 282

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M    DVV+W  MISGH + G   +A+ +F  M +  V+    T   +L+A   V+
Sbjct: 283 LFGEMSS-PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                  VHA  IK     +  VG++L++ Y K   ++ AAKVFE ++EK+ V W+AM+ 
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GYA  G++   ++++  + S G   ++FTF+S+++ C A S  +E G QFH+  IK KL 
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA-SHDLEMGSQFHSIIIKKKLA 460

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             L V +ALV MY+K G +E A ++F+R   RD V+WN++I  Y Q  +  +A ++FK M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
               +  DG      + ACTH   + +G+Q   + V +  +   +   S ++D+YS+ G+
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV-KCGLDRDLHTGSSLIDMYSKCGI 579

Query: 633 LEKAMDIINRMP 644
           ++ A  + + +P
Sbjct: 580 IKDARKVFSSLP 591



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/528 (30%), Positives = 264/528 (50%), Gaps = 42/528 (7%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T S VL TC    +  FGRQ+HC  +K G  R+     +LVD+Y + + + D RRVF+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + N V WT L SGY +  + +  + +F RM+ EG +P+   F TV              
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV-------------- 267

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
                                I+ Y++   ++DAR +F  M   D + WN M++G+    
Sbjct: 268 ---------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
               A E F NM  +  + TRST  SV+        L L   +H++ +K G+  +  + +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YSKC KME A+K+F  + E  DV  W AMI G+  NG     +  F  M   G  
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYN 425

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            + FT++ +L+   A        Q H+ IIK    K+  VG AL++ Y K G L++A ++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           FE + ++D V W+ ++  Y Q  +   A  +++++   G+  +    +S + ACT     
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH-G 544

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           + QGKQ H  S+K  L+  L   S+L+ MYSK G I+ A +VF    +  +VS N++I G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           Y+Q+ + ++A+ +F+EM  + +    ITF  ++ AC     +  G Q+
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/549 (27%), Positives = 290/549 (52%), Gaps = 16/549 (2%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            ++++ Y+R   ++D R +F +M+  +VV+W  ++SG+ +       +E F  M+   +K
Sbjct: 265 VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324

Query: 177 PNSFTFSTVLGVLADEGIVAT---AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
               T  +VL  +   GIVA     + VH   IK G      V ++L+SMY K + +  A
Sbjct: 325 STRSTLGSVLSAI---GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             VF+ +E+++ + WN+M+ GY  N    +  E F +M  +G  +   TF S++  CA +
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
            +L +  Q HS ++K  +  +  +   L+  Y+KCG +EDA +IF  M + +D V+W  +
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTI 500

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           I  ++Q+     A + F +M   G+  +G   +  L A   V       QVH   +K   
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL 560

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           ++    G++L++ Y K GI+ +A KVF  + E  +V+ +A++AGY+Q  + E AV ++++
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQE 619

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN-ALCVSSALVTMY-SK 527
           + + GV P+E TF++++ AC  P  ++  G QFH    K   ++    +  +L+ MY + 
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPE-SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
           +G  E+ +   +    + +V W  M+ G++Q+G  ++AL+ +KEMR   +  D  TF+ V
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           +  C+    + EG+    ++ +  H    +   + ++D+Y++ G ++ +  + + M   +
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTS-NTLIDMYAKCGDMKGSSQVFDEMRRRS 797

Query: 648 SATVWRTVL 656
           +   W +++
Sbjct: 798 NVVSWNSLI 806



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 42/309 (13%)

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           LR+ + +HS+ L  GID +  +   ++  Y+KC ++  A K F  +   KDV +W +M+S
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAWNSMLS 133

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT--AQPAVSPF--QVHAHIIKTNYEK 411
            +   G     +  F  +    + PN FT+SI+L+  A+     F  Q+H  +IK   E+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           +   G AL++ Y K   + +A +VFE I + + V W+ + +GY + G  E AV ++ ++ 
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
            EG +P+   F +VIN                                     Y + G +
Sbjct: 254 DEGHRPDHLAFVTVINT------------------------------------YIRLGKL 277

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           + A  +F      D+V+WN MI G+ + G    A+E F  MR+  ++    T   V++A 
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337

Query: 592 THAGLVDEG 600
                +D G
Sbjct: 338 GIVANLDLG 346



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 27/362 (7%)

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           VH+  +    +    +G A+++ Y K   +  A K F+ + EKD+ AW++ML+ Y+ IG 
Sbjct: 82  VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGK 140

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
               ++ +  L    + PN+FTFS V++ C A    VE G+Q H   IK  L        
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTC-ARETNVEFGRQIHCSMIKMGLERNSYCGG 199

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           ALV MY+K   I  A  VF+     + V W  +  GY + G  ++A+ VF+ MR +    
Sbjct: 200 ALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP 259

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           D + F+ VI      G + + +  F  M +     P +  ++ M+  + + G    A++ 
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEY 314

Query: 640 INRM---PFAASATVWRTVLAACRLIS-----LQPHDSAIYV-LLSNMYAATGHWQERAR 690
              M      ++ +   +VL+A  +++     L  H  AI + L SN+Y  +      ++
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTY--SFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
             K+    KV     +  +E KN  +  + + G   + +S+    K+ EL   +K +GY 
Sbjct: 375 CEKMEAAAKV-----FEALEEKNDVFWNAMIRGYAHNGESH----KVMELFMDMKSSGYN 425

Query: 749 PD 750
            D
Sbjct: 426 ID 427


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/626 (38%), Positives = 376/626 (60%), Gaps = 22/626 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT-RSTFVSVIKLCA 291
           A +VF      D +TWNSM+  +V + +   A +++  M      +  R TF S++K CA
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
              E ++ + LH QV+K  +  D  I T L+  Y+ CG ++ A  +F  M     VV WT
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV-WT 149

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKT 407
           +MISG+++N   + A+  + +M  +G  P+  T + +++A   +    V    H+HI + 
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
           + +    +G+AL+N Y K G L  A +VF+ + +KD+ AWSA++ GY +   +  A++++
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF 269

Query: 468 RQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           R++     ++PNE T  +VI+AC A    +E G+  H    + +  +++ ++++L+ M+S
Sbjct: 270 REVAGGSNMRPNEVTILAVISAC-AQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G+I++A  +F     +DL+SWNSM+ G A HG  ++AL  F  M+  DL+ D ITFIG
Sbjct: 329 KCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIG 388

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V+TAC+HAGLV EG++ F  +   + +    EHY CMVDL  RAG+L +A + I  MP  
Sbjct: 389 VLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ 448

Query: 647 ASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
               +W ++L ACR              L+ L+P +  +Y+LLSN+YA    W E  +VR
Sbjct: 449 PDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVR 508

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           +LMN++ ++K  G S + + N  +SFLAGD SHP+  +I   L ++  +LK  GY  DTS
Sbjct: 509 ELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTS 568

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
            VL +IDD  KE  +SQHSE+LA+ +GL+ +  G  + I+KNLRVC DCHT+IKL+SK+ 
Sbjct: 569 EVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIY 628

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +R I +RD NRFHHFK+G CSC DYW
Sbjct: 629 QRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 198/405 (48%), Gaps = 32/405 (7%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T  S+LK C  L +   G+ +H + VK     D+ + T+L+++Y    +++  R +F+ M
Sbjct: 81  TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM 140

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              N V WTS++SGY +N   +  L L+ +M+ +G  P+  T +T++   A+   +   +
Sbjct: 141 GHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGM 200

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           ++H+ + +   ++   + +AL++MY K   ++ AR VFD + D+D   W++++ GYV N 
Sbjct: 201 KLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNN 260

Query: 260 LHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
              EA + F  + G +       T ++VI  CA   +L   R +H  + +       ++ 
Sbjct: 261 RSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN 320

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  +SKCG ++ A +IF  M   KD++SW +M++G   +G    A+  F  M    +
Sbjct: 321 NSLIDMFSKCGDIDAAKRIFDSM-SYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDL 379

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHII----KTNYEKSFSVGTAL--------LNAYVKK 426
           +P+  T+  +LTA         HA ++    K  YE     G  L        ++   + 
Sbjct: 380 QPDEITFIGVLTACS-------HAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRA 432

Query: 427 GILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           G+L EA +   ++  + D   W +ML          GA ++Y  L
Sbjct: 433 GLLAEAREFIRVMPLQPDGAIWGSML----------GACRVYNNL 467



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 187/420 (44%), Gaps = 38/420 (9%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LF+R   RN V +  ++  Y ++    EAL L+  +   G      T+++++  C
Sbjct: 131 KSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L D   G ++H    +        + ++LV++Y +  +++  R+VFD +++ +V +W+
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWS 250

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEG---IKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +L+ GY +N  +   L+LF   +V G   ++PN  T   V+   A  G + T   VH  +
Sbjct: 251 ALIFGYVKNNRSTEALQLFR--EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYI 308

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
            +       S+ N+LI M+ K   +  A+ +FD M  +D I+WNSMV G   + L  EA 
Sbjct: 309 TRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREAL 368

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVA 324
             F+ M     +    TF+ V+  C+    ++  ++L  ++    G+         ++  
Sbjct: 369 AQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDL 428

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
             + G + +A +   +M    D   W +M+      GA  +  N   ++  E  R     
Sbjct: 429 LCRAGLLAEAREFIRVMPLQPDGAIWGSML------GACRVYNNL--ELGEEAAR----- 475

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
              +L  +P                  +  V   L N Y ++ + +E  KV EL++EK I
Sbjct: 476 --CLLELEPT-----------------NDGVYILLSNIYARRKMWNEVKKVRELMNEKGI 516


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/635 (37%), Positives = 365/635 (57%), Gaps = 58/635 (9%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N  I+ ++++  +  AR VF+ M  R ++TWN+M++GY                      
Sbjct: 77  NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYT--------------------- 115

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                     K+    KE   A +L  ++ +      +NI   ++V Y +   +E A   
Sbjct: 116 ----------KVAGKVKE---AHELFDKIPEPD-SVSYNI---MLVCYLRSYGVEAALAF 158

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ M  +KD+ SW  +ISG  QNG +  A + F  M  +    NG ++S +++       
Sbjct: 159 FNKM-PVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGD 213

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            +    + K    KS  V TA+L  Y+K G ++ A ++F+ +  K++V W++M+AGY + 
Sbjct: 214 LEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVEN 273

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
              E  +K+++ +    V+PN  + SSV+  C+  SA +  G+Q H    K+ L+     
Sbjct: 274 CRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSA-LPLGRQMHQLVSKSPLSKDTTA 332

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            ++L++MY K G+++SA ++F    ++D++SWN+MI GYAQHG  +KAL +F +MR   +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTM 392

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D ITF+ VI AC HAG VD G QYF  M  E  I     HY+C++DL  RAG L++A+
Sbjct: 393 KPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAV 452

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
            +I  MPF   A ++ T+L ACR              L++L P  +  YV L+N+YAAT 
Sbjct: 453 SLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATN 512

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W + A+VRK+M +  V K  GYSWIE+K+ T+ F + D  HP+   I+ KL EL  ++K
Sbjct: 513 KWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMK 572

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
            AGY PD  + L D+++EHKE +L  HSE+LAIAFGL+ T  G P+++ KNLRVCGDCH 
Sbjct: 573 LAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHR 632

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IK IS +E+R+I+VRDT RFHHF+ G CSCGDYW
Sbjct: 633 AIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 237/515 (46%), Gaps = 66/515 (12%)

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
           A DV      +  ++R  ++E  R VF+ M+    V+W ++LSGY   K+  +V E  H 
Sbjct: 70  ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGY--TKVAGKVKEA-HE 126

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           +  +  +P+S +++ +L                             VC      YL+S  
Sbjct: 127 LFDKIPEPDSVSYNIML-----------------------------VC------YLRSYG 151

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           V  A A F+ M  +D  +WN++++G+  N    +AF+ F+ M     E    ++ ++I  
Sbjct: 152 VEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM----PEKNGVSWSAMISG 207

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
                +L  A +L+  V    +     + T ++  Y K GK+E A +IF  M  +K++V+
Sbjct: 208 YVEHGDLEAAEELYKNVGMKSV----VVETAMLTGYMKFGKVELAERIFQRM-AVKNLVT 262

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           W +MI+G+++N   +  +  F  M    VRPN  + S +L     +S      Q+H  + 
Sbjct: 263 WNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVS 322

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K+   K  +  T+L++ Y K G LD A K+F  +  KD+++W+AM++GYAQ G    A+ 
Sbjct: 323 KSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALH 382

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSA 520
           ++ ++ +  +KP+  TF +VI AC   +  V+ G Q+         I+AK  +  CV   
Sbjct: 383 LFDKMRNGTMKPDWITFVAVILACNH-AGFVDLGVQYFKSMKKEFGIEAKPVHYTCV--- 438

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
            + +  + G ++ A  + K    +   +    + G  +     K L++ +   R  L  D
Sbjct: 439 -IDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACR---IHKNLDLAEFAARNLLNLD 494

Query: 581 GITFIGVITACTHAGLVDEGQQYFDI--MVNEHHI 613
             +  G +         ++  Q   +  M+ EH++
Sbjct: 495 PTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNV 529



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 199/457 (43%), Gaps = 55/457 (12%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           + F++ P ++   +N L+  + ++   Q+A +LF  +       + + +S  ++  G L 
Sbjct: 157 AFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEH-GDL- 214

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
                 +   E  K+   + V V T+++  YM+   VE   R+F  M   N+V+W S+++
Sbjct: 215 ------EAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIA 268

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY  N   +  L++F  M    ++PN  + S+VL   ++   +    Q+H +V K+    
Sbjct: 269 GYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSK 328

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            T+ C +LISMY K   +  A  +F  M  +D I+WN+M++GY  +    +A   F+ M 
Sbjct: 329 DTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMR 388

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               +    TFV+VI  C                       +H     L V Y K  K E
Sbjct: 389 NGTMKPDWITFVAVILAC-----------------------NHAGFVDLGVQYFKSMKKE 425

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
                F +  E K  V +T +I    + G +D AV+   +M     +P+   Y  +L A 
Sbjct: 426 -----FGI--EAKP-VHYTCVIDLLGRAGRLDEAVSLIKEMP---FKPHAAIYGTLLGAC 474

Query: 393 PAVSPFQVHAHIIKT--NYEKSFSVG-TALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
                  +     +   N + + + G   L N Y      D+ AKV +++ E ++V    
Sbjct: 475 RIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVK--- 531

Query: 450 MLAGYAQI------GDTEGAVKIYRQLTSEGVKPNEF 480
            + GY+ I       +   + +++ +LTS   K NE 
Sbjct: 532 -IPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNEL 567


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/749 (34%), Positives = 419/749 (55%), Gaps = 77/749 (10%)

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDD--MNESNVVSWTSLLSGYARNKMNDRVLELF 167
           AR +  +TS +  Y R  ++ + R+VFD+  + +  + SW +++S Y  +      L LF
Sbjct: 16  ARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLF 75

Query: 168 HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
            +M     + N+ +F                                   N +IS Y+K+
Sbjct: 76  DQMP----QRNTVSF-----------------------------------NGMISGYVKN 96

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS-V 286
            MV DAR VFD M +R+ ++W SMV GYV   +  EA + F        E+ R   VS  
Sbjct: 97  GMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLF-------WEMPRRNVVSWT 149

Query: 287 IKLCATTKELRL--ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           + +    KE R+  A++L   + +     D  + T ++  Y + G++++A ++F  M+ +
Sbjct: 150 VMIGGLLKESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLDEARELFDEMK-V 204

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHI 404
           ++V +WT M+SG+ +NG +D+A   F  M       N  +++ +L         +    +
Sbjct: 205 RNVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVSWTAMLMGYTQSGRMKEAFEL 260

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
            +    K       ++  +   G +  A  +FE + E+D   W+AM+  + + G    A+
Sbjct: 261 FEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEAL 320

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++ ++  EGV  N  +  SV++ C A  A+++ G+Q HA  ++++ +  L V+S L+TM
Sbjct: 321 GLFARMQREGVALNFPSMISVLSVC-ASLASLDHGRQVHARLVRSEFDQDLYVASVLITM 379

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K G++  A  +F R   +D+V WNSMI GY+QHG  ++AL VF +M    ++ D +TF
Sbjct: 380 YVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTF 439

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           IGV++AC+++G V EG + F+ M   + + P +EHY+CMVDL  RAG +++AM+++ +MP
Sbjct: 440 IGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMP 499

Query: 645 FAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERAR 690
               A VW  +L ACR              L  L+P ++  YVLLS+MYA  G W++   
Sbjct: 500 MEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEV 559

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKP 749
           +RK +N R+V K  G SWIEV+ K + F  GD  SHP+ + I   LE+LS  L++AGY P
Sbjct: 560 LRKKIN-RRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCP 618

Query: 750 DTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLIS 809
           D S+VL D+D+E K   L  HSERLA+A+GL+  P G P++++KNLRVCGDCH+ IKLI+
Sbjct: 619 DGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIA 678

Query: 810 KLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           K+  R+I++RD NRFHHFK+G CSC D+W
Sbjct: 679 KVTGREIILRDANRFHHFKDGSCSCKDFW 707



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 222/461 (48%), Gaps = 38/461 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC- 90
           + +FD  P+RN V +  ++  Y ++ + +EA  LF  + R  +  +   +  +LK     
Sbjct: 103 RKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRID 162

Query: 91  ----LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               LFD +               +DV V T+++  Y +   +++ R +FD+M   NV +
Sbjct: 163 DAKKLFDMIP-------------EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFT 209

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMV 205
           WT+++SGYA+N   D   +LF  M     + N  +++ +L      G +  A ++   M 
Sbjct: 210 WTTMVSGYAKNGRVDVARKLFEVMP----ERNEVSWTAMLMGYTQSGRMKEAFELFEAMP 265

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K         CN +I  +  +  +  AR +F+GM++RD  TWN+M+  +    L +EA 
Sbjct: 266 VK-----WIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEAL 320

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F  M   G  L   + +SV+ +CA+   L   RQ+H++++++  D D  + + L+  Y
Sbjct: 321 GLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMY 380

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            KCG +  A  IF+     KDVV W +MI+G+ Q+G  + A+N F  M   GV+P+  T+
Sbjct: 381 VKCGDLVRAKGIFNRFL-FKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTF 439

Query: 386 SIILTAQPAVSPFQVHAHI---IKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID 440
             +L+A       +    I   +K  Y  E        +++   + G +DEA ++ E + 
Sbjct: 440 IGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMP 499

Query: 441 -EKDIVAWSAMLAG---YAQIGDTEGAVKIYRQLTSEGVKP 477
            E D + W A+L     + ++   E AV+   +L  +   P
Sbjct: 500 MEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGP 540


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/663 (36%), Positives = 382/663 (57%), Gaps = 24/663 (3%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G     + FS  L     EG V    + H  V+K G      VC +LI MY K   V  A
Sbjct: 109 GFPHRQYVFSA-LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             V+D M   D+ T N +++ Y  N   ++AF+ F  +G  G      T+ +++ +C T 
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             ++  +QLH+ V+K     +  +   L+  YSKCG ME+A  +F  +R+ ++++SWTA 
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQ-RNIISWTAS 286

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           I+G  Q+G    A+  F  M   G+ PN FT+SI+L +   V  F      H  +IK   
Sbjct: 287 INGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGM 346

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYR 468
                VGTA+++ Y   G +DEA K F+ +      V+W+A++AGY      E A++ + 
Sbjct: 347 ASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFC 406

Query: 469 QLTSEGVKPNEFTFSSVINACTA-PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           ++  E V  NEFT+S++  AC++ PS A     Q H+  IK+ + + L V+S+L+  Y++
Sbjct: 407 RMVKEDVACNEFTYSNIFKACSSFPSLATT--VQIHSRLIKSNVESNLHVASSLIEAYTQ 464

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G++E+A +VF +    D+VSWNS+I  Y+Q+G   KA+ + ++M  +  +    TF+ V
Sbjct: 465 CGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTV 524

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           ++AC+H+GLV EGQ++F  MV ++ I P   H SCMVD+  RAG LE A+D I ++    
Sbjct: 525 LSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKP 584

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           +A++WR +LAACR              ++ L+P+D+ +YV LSNMYA  G W +    R+
Sbjct: 585 TASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRR 644

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
           LM  +++ KE G SWIEV NK Y F + D +HP+  ++Y KL++L  +++D GY P T+ 
Sbjct: 645 LMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTT 704

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
           VL     + KE ++  HSE+LA+ FGL++ P G P++++KNLRVC DC++ +K IS++  
Sbjct: 705 VLHPESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITD 764

Query: 814 RDI 816
           R I
Sbjct: 765 RYI 767



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/554 (29%), Positives = 275/554 (49%), Gaps = 51/554 (9%)

Query: 175  IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
             + +S T++  + + A +  +     +H  ++  G   +T     L+S Y +   + +AR
Sbjct: 799  FQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNAR 858

Query: 235  AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
             +FD + + +   W  +         + EA   F+ M   G    +    S++K C    
Sbjct: 859  KLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLS 918

Query: 295  ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            + R    +H+ +LKN  + D  I + L+  YSKCG +E A ++F  + + KD+V   AM+
Sbjct: 919  DRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVD-KDLVVMNAMV 977

Query: 355  SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
            SG+ Q+G +  A+B   +M + GV+PN  +++                            
Sbjct: 978  SGYAQHGFVHEALBLVQKMQQAGVKPNVVSWN---------------------------- 1009

Query: 415  VGTALLNAYVKKGILDEAAKVFELID----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
                L+  + + G     ++VF L+     E D+V+W+++++G+ Q          ++++
Sbjct: 1010 ---TLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEM 1066

Query: 471  TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
              +G  P+  T SS++ ACT   A +  GK+ H  ++   +   + V SALV MY+K G 
Sbjct: 1067 LDQGFCPSSVTISSLLPACTN-VANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGY 1125

Query: 531  IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
            I  A  +F    +R+ V+WNS+I GYA HG+  +A+E+F +M   D + D +TF  V+ A
Sbjct: 1126 ISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNA 1185

Query: 591  CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
            C+HAG+V+ G+  F  M  ++ I P +EHY+CMVDL  RAG L +A D+I  MP      
Sbjct: 1186 CSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKF 1245

Query: 651  VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
            VW  +L ACR              L  L+P      +LLSN+YA  G W   A+++K+M 
Sbjct: 1246 VWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMK 1305

Query: 697  DRKVKKEAGYSWIE 710
             RK  K  G SWIE
Sbjct: 1306 QRKFGKFPGCSWIE 1319



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/486 (31%), Positives = 257/486 (52%), Gaps = 17/486 (3%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           S L  CG       GR+ HC  VK G   D  V TSL+D+Y +   V+   RV+D M   
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSL 177

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +  +   L+S YARN    +  ++F ++   G +PN +T+ST+L V      +    Q+H
Sbjct: 178 DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLH 237

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             V+K      T+V NAL+++Y K  M+ +A  VF+ +  R+ I+W + + G+  +    
Sbjct: 238 AHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFK 297

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +A + F+ M  +G E    TF  V+  C   K+    R  H+QV+K G+     + T ++
Sbjct: 298 KALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAII 357

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YS  G+M++A K F  M      VSW A+I+G++ N  I+ A+  FC+M +E V  N 
Sbjct: 358 DMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNE 417

Query: 383 FTYSIILTAQPA----VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           FTYS I  A  +     +  Q+H+ +IK+N E +  V ++L+ AY + G L+ A +VF  
Sbjct: 418 FTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQ 477

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           I + D+V+W++++  Y+Q GD   A+ + R++  EG KP   TF +V++AC+  S  V++
Sbjct: 478 ISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSH-SGLVQE 536

Query: 499 GKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSM 552
           G++F        SI+ +  +  C    +V +  + G +E+A +  K+   +   S W  +
Sbjct: 537 GQEFFKSMVQDYSIQPEETHCSC----MVDILGRAGQLENALDFIKKLTMKPTASIWRPL 592

Query: 553 I--CGY 556
           +  C Y
Sbjct: 593 LAACRY 598



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 217/478 (45%), Gaps = 45/478 (9%)

Query: 97   GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            GR +H   V  G AR    +  L+  Y     + + R++FD +  +N+  W  L    AR
Sbjct: 822  GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881

Query: 157  NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                +  L  F  MQ EG++PN F   ++L          T   +HT+++KN  E    +
Sbjct: 882  RGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYI 941

Query: 217  CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             +ALI MY K   V  A  VFD + D+D +  N+MV+GY  +    EA +    M  AG 
Sbjct: 942  ISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAG- 1000

Query: 277  ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                                         V  N + ++      L+  +S+ G     S+
Sbjct: 1001 -----------------------------VKPNVVSWN-----TLIAGFSQVGDKSMVSE 1026

Query: 337  IFSMMRE---MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
            +F +M       DVVSWT++ISG +QN       + F +M  +G  P+  T S +L A  
Sbjct: 1027 VFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACT 1086

Query: 394  AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             V+      ++H + +    EK   V +AL++ Y K G + EA  +F ++ E++ V W++
Sbjct: 1087 NVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNS 1146

Query: 450  MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIK 508
            ++ GYA  G    A++++ Q+     K +  TF++V+NAC+  +  VE G+  F     K
Sbjct: 1147 LIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSH-AGMVELGESLFXKMQEK 1205

Query: 509  AKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
             ++   L   + +V +  + G +  A ++ K    + D   W +++     HG+ + A
Sbjct: 1206 YRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELA 1263



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 185/359 (51%), Gaps = 2/359 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           ++D+    +    N L+  Y R+    +A  +F+ I  +G      T S++L  CG +  
Sbjct: 170 VYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISA 229

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   VK  +  +  V  +L+ LY +   +E+   VF+ + + N++SWT+ ++G
Sbjct: 230 IQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASING 289

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + ++    + L+ F  M+  GI+PN FTFS VL               HT VIK G    
Sbjct: 290 FYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASG 349

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDS-ITWNSMVAGYVTNELHMEAFETFNNMG 272
             V  A+I MY     + +A   F  M    S ++WN+++AGYV NE   +A E F  M 
Sbjct: 350 VFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMV 409

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                    T+ ++ K C++   L    Q+HS+++K+ ++ + ++ + L+ AY++CG +E
Sbjct: 410 KEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLE 469

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +A ++F+ + +  DVVSW ++I  + QNG    A+    +M  EG +P   T+  +L+A
Sbjct: 470 NAVQVFTQISD-ADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSA 527



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 205/450 (45%), Gaps = 45/450 (10%)

Query: 26   FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            FY++  Q      LFD+ P  N   +  L     R   ++EAL+ F  +++ GL      
Sbjct: 847  FYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFV 906

Query: 81   LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            L S+LK CG L D   G  +H   +K+ F  D  + ++L+ +Y +  +VE   RVFD + 
Sbjct: 907  LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIV 966

Query: 141  ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
            + ++V   +++SGYA++      L+L  +MQ  G+KPN  +++T++   +  G  +   +
Sbjct: 967  DKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSE 1026

Query: 201  VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
            V  ++  NG E                                D ++W S+++G+V N  
Sbjct: 1027 VFRLMTANGVE-------------------------------PDVVSWTSVISGFVQNFH 1055

Query: 261  HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
            + E F+ F  M   G   +  T  S++  C     LR  +++H   +  G++ D  +R+ 
Sbjct: 1056 NHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSA 1115

Query: 321  LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
            L+  Y+KCG + +A  +F MM E ++ V+W ++I G+  +G  + A+  F QM     + 
Sbjct: 1116 LVDMYAKCGYISEAKILFYMMPE-RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKL 1174

Query: 381  NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            +  T++ +L A       ++   +     EK + +   L +      +L  A K+ E  D
Sbjct: 1175 DHLTFTAVLNACSHAGMVELGESLFXKMQEK-YRIEPRLEHYACMVDLLGRAGKLSEAYD 1233

Query: 441  -------EKDIVAWSAMLAGYAQIGDTEGA 463
                   E D   W A+L      G+ E A
Sbjct: 1234 LIKAMPVEPDKFVWGALLGACRNHGNIELA 1263



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 81/152 (53%)

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
           V +N L+  Y  +   ++A+  F  + +  +     T S++ K C          Q+H  
Sbjct: 383 VSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSR 442

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
            +KS    +++V++SL++ Y +  ++E+  +VF  +++++VVSW S++  Y++N    + 
Sbjct: 443 LIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKA 502

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           + L  +M  EG KP S TF TVL   +  G+V
Sbjct: 503 IFLLRKMIEEGNKPTSXTFLTVLSACSHSGLV 534


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/781 (34%), Positives = 419/781 (53%), Gaps = 89/781 (11%)

Query: 77  FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF 136
            G +  ++L+ C  L       QV  +C  S        S+  +  Y R   ++  R+VF
Sbjct: 1   MGHSGRAILRRCMML-------QVRLQCTTS--------SSYAIACYARNGQLDHARKVF 45

Query: 137 DD--MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           D+  +    V SW ++++ Y   +     L LF +M      P   T S           
Sbjct: 46  DETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM------PQRNTVSW---------- 89

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
                                  N LIS ++K+ M+ +AR VFD M DR+ ++W SMV G
Sbjct: 90  -----------------------NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRG 126

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL--ARQLHSQVLKNGID 312
           YV N    EA   F +M        ++     + L    +E R+  AR+L   + +    
Sbjct: 127 YVRNGDVAEAERLFWHMP------HKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEK--- 177

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            D    T ++  Y + G++++A  +F  M + ++VV+WTAM+SG+ +NG +D+A   F  
Sbjct: 178 -DVVAVTNMIGGYCEEGRLDEARALFDEMPK-RNVVTWTAMVSGYARNGKVDVARKLFEV 235

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           M       N  +++ +L         +  + +      K   V   ++  +   G +D+A
Sbjct: 236 MPER----NEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKA 291

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            +VF+ + E+D   WSAM+  Y + G    A+ ++R++  EG+  N  +  SV++ C + 
Sbjct: 292 RRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVS- 350

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
            A+++ GKQ HA  ++++ +  L V+S L+TMY K GN+  A +VF R   +D+V WNSM
Sbjct: 351 LASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSM 410

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I GY+QHG  ++AL VF +M    +  D +TFIGV++AC+++G V EG + F+ M  ++ 
Sbjct: 411 ITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQ 470

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------------ 660
           + P +EHY+C+VDL  RA  + +AM ++ +MP    A VW  +L ACR            
Sbjct: 471 VEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAV 530

Query: 661 --LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
             L  L+P ++  YVLLSNMYA  G W++   +R+ +  R V K  G SWIEV+ K + F
Sbjct: 531 EKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMF 590

Query: 719 LAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIA 777
             GD   HP+   I   LE+L   L++AGY PD S+VL D+D+E K   L  HSE+LA+A
Sbjct: 591 TGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVA 650

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           +GL+  P G P++++KNLRVCGDCH+ IKLI+K+  R+I++RD NRFHHFK+G CSC DY
Sbjct: 651 YGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDY 710

Query: 838 W 838
           W
Sbjct: 711 W 711



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 210/507 (41%), Gaps = 103/507 (20%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF++ PQRN V +N L+  + ++ +  EA  +F             T+            
Sbjct: 77  LFEKMPQRNTVSWNGLISGHIKNGMLSEARRVF------------DTMPD---------- 114

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                            R+V   TS+V  Y+R  +V +  R+F  M   NVVSWT +L G
Sbjct: 115 -----------------RNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGG 157

Query: 154 YARNKMNDRVLELFHRMQVEGI---------------------------KPNSFTFSTVL 186
             +    D   +LF  M  + +                           K N  T++ ++
Sbjct: 158 LLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMV 217

Query: 187 GVLADEGIVATAVQV--------------------HTMVIKNGGEVVTS-------VCNA 219
              A  G V  A ++                    H+  ++    +  +       VCN 
Sbjct: 218 SGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNE 277

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           +I  +  +  V  AR VF GM++RD+ TW++M+  Y      +EA   F  M   G  L 
Sbjct: 278 MIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALN 337

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             + +SV+ +C +   L   +Q+H+Q++++  D D  + + L+  Y KCG +  A ++F+
Sbjct: 338 FPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFN 397

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
               +KDVV W +MI+G+ Q+G  + A+N F  M   GV P+  T+  +L+A       +
Sbjct: 398 RF-PLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVK 456

Query: 400 VHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAG 453
               + +T       E        L++   +   ++EA K+ E +  E D + W A+L  
Sbjct: 457 EGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516

Query: 454 ---YAQIGDTEGAVKIYRQLTSEGVKP 477
              + ++   E AV+   QL  +   P
Sbjct: 517 CRTHMKLDLAEVAVEKLAQLEPKNAGP 543



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 24/359 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-----LPLFGSTLSSVLK 86
           ++LFD  P+RN V +  ++  Y R+     A  LF  +           L G T S  ++
Sbjct: 199 RALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMR 258

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               LFD +               + V V   ++  +     V+  RRVF  M E +  +
Sbjct: 259 EASSLFDAMP-------------VKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGT 305

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W++++  Y R       L LF RMQ EG+  N  +  +VL V      +    QVH  ++
Sbjct: 306 WSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLV 365

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           ++  +    V + LI+MY+K   +  A+ VF+    +D + WNSM+ GY  + L  EA  
Sbjct: 366 RSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALN 425

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVA 324
            F++M  +G      TF+ V+  C+ + +++   +L  + +K     +  I     L+  
Sbjct: 426 VFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELF-ETMKCKYQVEPGIEHYACLVDL 484

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISG---HLQNGAIDLAVNFFCQMTREGVRP 380
             +  ++ +A K+   M    D + W A++     H++    ++AV    Q+  +   P
Sbjct: 485 LGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGP 543



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 119/231 (51%), Gaps = 2/231 (0%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + +F    +R+   ++ ++  Y R     EAL LF  ++R GL L   +L SVL  C 
Sbjct: 290 KARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCV 349

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G+QVH + V+S F +D+ V++ L+ +Y++  N+   ++VF+     +VV W S
Sbjct: 350 SLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNS 409

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKN 208
           +++GY+++ + +  L +FH M   G+ P+  TF  VL   +  G V   +++  TM  K 
Sbjct: 410 MITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKY 469

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTN 258
             E        L+ +  ++  V +A  + + M  + D+I W +++    T+
Sbjct: 470 QVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTH 520


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/657 (35%), Positives = 377/657 (57%), Gaps = 52/657 (7%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VF+  ++ + + WN+M+ G  ++   +   E +  M   G      TF  ++K CA 
Sbjct: 36  AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF--SMMREM------ 344
           +K     RQ+H+QV+K G + D    T L+  Y++ G++EDA K+F  S  R++      
Sbjct: 96  SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155

Query: 345 ----------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                                 +DVVSW AMI+G+++N   + A+  F +M R  VRP+ 
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDE 215

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            T   +L+A       ++   I         +  S  +  A +  Y K G ++ A+ +FE
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            +  KD+V+W+ ++ GY  +   + A+ +++++   G  PN+ T  SV+ AC A   A++
Sbjct: 276 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC-AHLGAID 334

Query: 498 QGKQFHACSIK--AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            G+  H    K    + N   + ++L+ MY+K G+IE+A +VF     + L SWN+MI G
Sbjct: 335 IGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFG 394

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           +A HG    A ++F  MR+  +E D IT +G+++AC+H+GL+D G+  F  +  +++I P
Sbjct: 395 FAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITP 454

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            +EHY CM+DL   AG+ ++A +II+ MP      +W ++L AC+              L
Sbjct: 455 KLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKL 514

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + ++P +S  YVLLSN+YA  G W++ AR+R+++N + +KK  G S IE+ +  + F+ G
Sbjct: 515 MEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIG 574

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D  HPQS +IY  LEE+   L++AG+ PDTS VLQ++++E KE  L  HSE+LAIAFGL+
Sbjct: 575 DKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 634

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +T  G  L +VKNLRVC +CH   KLISK+ +R+IV RD  RFHHF++G+CSC DYW
Sbjct: 635 STKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 213/478 (44%), Gaps = 41/478 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N +L      S     L +++ +   G      T   +LK+C    
Sbjct: 38  SVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSK 97

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               GRQ+H + +K G   D    TSL+ +Y R   +ED R+VFD  ++ +VVS T+L++
Sbjct: 98  TFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALIT 157

Query: 153 GYA-------------------------------RNKMNDRVLELFHRMQVEGIKPNSFT 181
           GYA                                N   +  LELF  M    ++P+  T
Sbjct: 158 GYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGT 217

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDARAVFDGM 240
             +VL   A  G +    ++HT+V  + G      + NA I +Y K   V  A  +F+G+
Sbjct: 218 LVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGL 277

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             +D ++WN+++ GY    L+ EA   F  M  +G      T +SV+  CA    + + R
Sbjct: 278 SCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 337

Query: 301 QLHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +H  + K   G+     +RT L+  Y+KCG +E A ++F+ M   K + SW AMI G  
Sbjct: 338 WIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMH-KSLSSWNAMIFGFA 396

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT-----NYEKSF 413
            +G  + A + F +M + G+ P+  T   +L+A        +  HI K+     N     
Sbjct: 397 MHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKL 456

Query: 414 SVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
                +++     G+  EA ++  ++  E D V W ++L      G+ E A    ++L
Sbjct: 457 EHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKL 514



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 22/354 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +  + +FD   +R+ V +N ++  Y  +  ++EAL LF  + R  +     TL SVL  C
Sbjct: 166 RSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSAC 225

Query: 89  GCLFDHVFGRQVHCECVK-SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
                   GR++H       GF   + +  + + LY +  +VE    +F+ ++  +VVSW
Sbjct: 226 AQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSW 285

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV-- 205
            +L+ GY    +    L LF  M   G  PN  T  +VL   A  G +     +H  +  
Sbjct: 286 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK 345

Query: 206 ----IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
               + NG  + TS    LI MY K   +  A  VF+ M  +   +WN+M+ G+  +   
Sbjct: 346 RLKGVTNGSALRTS----LIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRA 401

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT-- 319
             AF+ F+ M   G E    T V ++  C+ +  L L R +   V +     D+NI    
Sbjct: 402 NAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ-----DYNITPKL 456

Query: 320 ---GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
              G M+      G  ++A +I  MM    D V W +++     +G ++LA +F
Sbjct: 457 EHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESF 510


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/604 (39%), Positives = 381/604 (63%), Gaps = 30/604 (4%)

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           T  LH+   +  NN  L   E  R+ +  ++K C    +L+  + +H+ ++ +    D  
Sbjct: 73  TTGLHV--LDLINNGSL---EPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLV 127

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG---AIDLAVNFFCQM 373
           I+  ++  Y+KCG +E A ++F  M  +KDVV+WT+MI+G+ Q+G   +   A+  F +M
Sbjct: 128 IKNSILFMYAKCGSLEIARQVFDEMC-VKDVVTWTSMITGYSQDGYASSATTALVLFLEM 186

Query: 374 TREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
            R+G+RPN F  S ++         V   Q+H    K  ++++  VG++L++ Y + G L
Sbjct: 187 VRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGEL 246

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            E+  VF+ ++ K+ V+W+A+++G+A+ G+ E A+ ++ ++  EG    EFT+S+++ + 
Sbjct: 247 RESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCS- 305

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
           ++ + ++EQGK  HA  +K+       V + L+ MY+K GNI  A +VF R  K D+VS 
Sbjct: 306 SSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSC 365

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           NSM+ GYAQHG  K+A+E+F+EM    ++E + ITF+ V+TAC+HAGL+DEG  YF++M 
Sbjct: 366 NSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELM- 424

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL------------ 656
            ++ + P + HY+ +VDL+ RAG+L++A   I  MP   +AT+W  +L            
Sbjct: 425 KKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMG 484

Query: 657 --AACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNK 714
             AA +++ L P     + LLSN+YA+ G W++ A+VRK M D  +KKE   SW+E++N 
Sbjct: 485 AYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENS 544

Query: 715 TYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERL 774
            + F A DISHPQ N++Y   E L+ ++K+ GY PDTS+V   +D + KE  L  HSE+L
Sbjct: 545 VHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKL 604

Query: 775 AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           A+AF L+ T  G+ ++I+KN+RVCGDCH+ IK +S + +R+I+VRDTNRFHHF++G CSC
Sbjct: 605 ALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSC 664

Query: 835 GDYW 838
            DYW
Sbjct: 665 RDYW 668



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 205/418 (49%), Gaps = 17/418 (4%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +LK C  L     G+ VH   + S F  D+ +  S++ +Y +  ++E  R+VFD+M   +
Sbjct: 97  LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156

Query: 144 VVSWTSLLSGYARNKMNDR---VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           VV+WTS+++GY+++         L LF  M  +G++PN F  S+++      G      Q
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQ 216

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H    K G +    V ++L+ MY +   +R++R VFD +E ++ ++WN++++G+     
Sbjct: 217 IHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGE 276

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA   F  M   G   T  T+ +++   +TT  L   + LH+ ++K+G      +   
Sbjct: 277 GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNT 336

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVR 379
           L+  Y+K G + DA K+F  + ++ DVVS  +M+ G+ Q+G    AV  F +M     + 
Sbjct: 337 LLHMYAKSGNICDAKKVFDRLVKV-DVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIE 395

Query: 380 PNGFTYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           PN  T+  +LTA          +  F++   + K   E   S  T +++ + + G+LD+A
Sbjct: 396 PNDITFLSVLTACSHAGLLDEGLYYFEL---MKKYGLEPKLSHYTTVVDLFGRAGLLDQA 452

Query: 433 AKVFELID-EKDIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSEGVKPNEFTFSSVINA 488
               E +  E +   W A+L       +TE GA    + L  +   P   T  S I A
Sbjct: 453 KSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYA 510



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 4/327 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRD---SLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           + +FD    ++ V +  ++  Y +D   S    AL LFL + R GL      LSS++K C
Sbjct: 146 RQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L   V G+Q+H  C K GF  +V V +SLVD+Y R   + + R VFD++   N VSW 
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWN 265

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +L+SG+AR    +  L LF +MQ EG     FT+S +L   +  G +     +H  ++K+
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS 325

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G ++V  V N L+ MY KS  + DA+ VFD +   D ++ NSM+ GY  + L  EA E F
Sbjct: 326 GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELF 385

Query: 269 NNMGL-AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
             M L    E    TF+SV+  C+    L         + K G++   +  T ++  + +
Sbjct: 386 EEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGR 445

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMI 354
            G ++ A      M    +   W A++
Sbjct: 446 AGLLDQAKSFIEEMPIEPNATIWGALL 472



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 199/410 (48%), Gaps = 14/410 (3%)

Query: 163 VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS 222
           VL+L +   +E   P+   ++ +L      G +     VHT ++ +       + N+++ 
Sbjct: 78  VLDLINNGSLE---PDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL---HMEAFETFNNMGLAGAELT 279
           MY K   +  AR VFD M  +D +TW SM+ GY  +        A   F  M   G    
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPN 194

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
                S++K C         +Q+H    K G   +  + + L+  Y++CG++ ++  +F 
Sbjct: 195 EFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFD 254

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
            + E K+ VSW A+ISG  + G  + A+  F +M REG     FTYS +L +       +
Sbjct: 255 EL-ESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLE 313

Query: 400 ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
               +HAH++K+  +    VG  LL+ Y K G + +A KVF+ + + D+V+ ++ML GYA
Sbjct: 314 QGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYA 373

Query: 456 QIGDTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           Q G  + AV+++ ++     ++PN+ TF SV+ AC+  +  +++G  +     K  L   
Sbjct: 374 QHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSH-AGLLDEGLYYFELMKKYGLEPK 432

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
           L   + +V ++ + G ++ A    +    + +   W +++     H +T+
Sbjct: 433 LSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTE 482



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 118/229 (51%), Gaps = 4/229 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ + +FD    +N V +N L+  + R    +EAL LF+ ++R G      T S++L + 
Sbjct: 247 RESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSS 306

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+ +H   +KSG      V  +L+ +Y ++ N+ D ++VFD + + +VVS  
Sbjct: 307 STTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCN 366

Query: 149 SLLSGYARNKMNDRVLELFHRMQ--VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           S+L GYA++ +    +ELF  M   VE I+PN  TF +VL   +  G++   +    ++ 
Sbjct: 367 SMLIGYAQHGLGKEAVELFEEMMLWVE-IEPNDITFLSVLTACSHAGLLDEGLYYFELMK 425

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
           K G E   S    ++ ++ ++ ++  A++  + M  + ++  W +++  
Sbjct: 426 KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGA 474


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/692 (34%), Positives = 388/692 (56%), Gaps = 56/692 (8%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---ARAVFDGMEDRDSITWNSMVAGYVT 257
           +H  +IK G        + L+ + + S        A +VF+ +++ + + WN+M  G+  
Sbjct: 52  IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 111

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +   + A + +  M   G      TF  ++K CA +K  +  +Q+H  VLK G D D  +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFV 171

Query: 318 RTGLMVAYSKCGKMEDASKIF--SMMREM----------------------------KDV 347
            T L+  Y + G++EDA K+F  S  R++                            KDV
Sbjct: 172 HTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDV 231

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           VSW AMISG+ + G    A+  F +M +  +RP+  T   +++A           QVH+ 
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSW 291

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I    +  +  +  +L++ Y K G L+ A  +FE +  KD+++W+ ++ GY  +   + A
Sbjct: 292 IDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEA 351

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS---A 520
           + +++++   G +PN+ T  S++ AC A   A++ G+  H   I  +L +A   SS   +
Sbjct: 352 LLLFQEMLRSGERPNDVTMLSILPAC-AHLGAIDIGRWIHV-YIDKRLKSATNASSLRTS 409

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+ MY+K G+IE+A +VF     + L SWN+MI G+A HG    A ++F  MR+  +E D
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPD 469

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITF+G+++AC+ +G++D G+  F  M  ++ I P +EHY CM+DL   +G+ ++A ++I
Sbjct: 470 DITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 529

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
           N M       +W ++L AC+              LI ++P +   YVLLSN+YA  G W 
Sbjct: 530 NNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWN 589

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           E A++R L+ND+ +KK  G S IE+ +  + F+ GD  HP++ +IY  LEE+   L+ AG
Sbjct: 590 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           + PDTS VLQ++++E KE  L  HSE+LAIAFGL++T  G  L IVKNLRVC +CH   K
Sbjct: 650 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 709

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LISK+ +R+I+ RD  RFHHF++G+CSC DYW
Sbjct: 710 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 218/470 (46%), Gaps = 44/470 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N +   +   S    AL L++ +  LGL     T   +LK+C    
Sbjct: 89  SVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSK 148

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--------------- 137
               G+Q+H   +K G+  D+ V TSL+ +Y++   +ED R+VFD               
Sbjct: 149 AFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIK 208

Query: 138 ----------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                           ++   +VVSW +++SGYA        LELF  M    I+P+  T
Sbjct: 209 GYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDEST 268

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             TV+   A  G +    QVH+ +  +G      + N+L+ +Y K   +  A  +F+G+ 
Sbjct: 269 MVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLL 328

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN+++ GY    L+ EA   F  M  +G      T +S++  CA    + + R 
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRW 388

Query: 302 LHSQV---LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
           +H  +   LK+  +   ++RT L+  Y+KCG +E A ++F+ +   K + SW AMI G  
Sbjct: 389 IHVYIDKRLKSATNAS-SLRTSLIDMYAKCGDIEAAHQVFNSILH-KSLSSWNAMIFGFA 446

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA 418
            +G  D A + F +M + G+ P+  T+  +L+A        +  HI +T   + + +   
Sbjct: 447 MHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRT-MTQDYKITPK 505

Query: 419 L------LNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
           L      ++     G+  EA ++   ++ E D V W ++L      G+ E
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVE 555



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 220/453 (48%), Gaps = 71/453 (15%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC------GKMEDASKI 337
           +S++  C T + LRL   +H+Q++K G+   HN    L      C        +  A  +
Sbjct: 37  LSLLHNCKTLQSLRL---IHAQMIKTGL---HNTNYALSKLLELCVISPHFDGLPYAISV 90

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  ++E  +++ W  M  GH  +     A+  +  M   G+ PN +T+  +L +      
Sbjct: 91  FETIQE-PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 149

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE---------------- 437
           F    Q+H H++K  Y+    V T+L++ YV+ G L++A KVF+                
Sbjct: 150 FKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKG 209

Query: 438 ------------LIDE---KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
                       L DE   KD+V+W+AM++GYA+ G+ + A+++++++    ++P+E T 
Sbjct: 210 YASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTM 269

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            +V++AC A S ++E G+Q H+        + L + ++L+ +YSK G +E+A  +F+   
Sbjct: 270 VTVVSAC-AQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLL 328

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D++SWN++I GY      K+AL +F+EM R     + +T + ++ AC H G +D G+ 
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRW 388

Query: 603 ---YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT----- 654
              Y D  +       ++   + ++D+Y++ G +E A  + N +    S + W       
Sbjct: 389 IHVYIDKRLKSATNASSLR--TSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGF 445

Query: 655 -----------VLAACRLISLQPHDSAIYVLLS 676
                      + +  R I ++P D     LLS
Sbjct: 446 AMHGRADAAFDIFSRMRKIGIEPDDITFVGLLS 478



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 160/356 (44%), Gaps = 9/356 (2%)

Query: 20  KSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           K   S  Y +  Q LFD  P ++ V +N ++  Y     ++EAL LF  + +  +    S
Sbjct: 208 KGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDES 267

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T+ +V+  C        GRQVH      GF  ++ +  SL+DLY +   +E    +F+ +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGL 327

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              +V+SW +L+ GY    +    L LF  M   G +PN  T  ++L   A  G +    
Sbjct: 328 LYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGR 387

Query: 200 QVHTMVIK--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
            +H  + K        +S+  +LI MY K   +  A  VF+ +  +   +WN+M+ G+  
Sbjct: 388 WIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH---SQVLKNGIDFD 314
           +     AF+ F+ M   G E    TFV ++  C+ +  L L R +    +Q  K     +
Sbjct: 448 HGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLE 507

Query: 315 HNIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           H    G M+      G  ++A ++ + M    D V W +++      G ++L  +F
Sbjct: 508 H---YGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESF 560


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/675 (35%), Positives = 396/675 (58%), Gaps = 23/675 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +H + +KS  +  V ++ SLV+LY +   + + + VF+ +   +VVSW  +++GY++
Sbjct: 25  GKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQ 83

Query: 157 N--KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           +    +  V+ELF RM+ E   PN+ TF+ V    +     A     H + IK       
Sbjct: 84  HGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV 143

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V ++L++MY K+ +  +AR VFD M +R+S++W +M++GY + +L  EA   F  M   
Sbjct: 144 FVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE 203

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                   F SV+      + +   +Q+H   +KNG+    ++   L+  Y+KCG ++DA
Sbjct: 204 EEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDA 263

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--- 391
            + F    + K+ ++W+AMI+G+ Q+G  D A+  F  M   G+RP+ FT+  ++ A   
Sbjct: 264 LQTFETSSD-KNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSD 322

Query: 392 -QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
              A    QVH +++K  +E    V TAL++ Y K   + +A K F+ + E DIV W++M
Sbjct: 323 LGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSM 382

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           + GY Q G+ E A+ +Y ++  EG+ PNE T +SV+ AC++  AA+EQGKQ HA ++K  
Sbjct: 383 IGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSL-AALEQGKQIHARTVKYG 441

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
               + + SAL TMY+K G ++  + VF+R   RD++SWN+MI G +Q+G  K+ALE+F+
Sbjct: 442 FGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFE 501

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           EM+ +  + D +TF+ +++AC+H GLV+ G  YF +M +E  + P +EHY+CMVD+ SRA
Sbjct: 502 EMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRA 561

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLS 676
           G L++A++            +WR +L ACR              L+ L   +S+ YVLLS
Sbjct: 562 GKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLS 621

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           ++Y+A G W++  RVR++M  R V KE G SWIE+K+  + F+  D  HPQ   I+ +L 
Sbjct: 622 SIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELR 681

Query: 737 ELSTRLKDAGYKPDT 751
           +LS ++KD GY+P T
Sbjct: 682 QLSKQMKDEGYEPAT 696



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 159/514 (30%), Positives = 270/514 (52%), Gaps = 17/514 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCR--DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +F+R   ++ V +N ++  Y +   S     + LF  +R         T + V      L
Sbjct: 62  VFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTL 121

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR  H   +K    RDV V +SL+++Y +     + R+VFD M E N VSW +++
Sbjct: 122 VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMI 181

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA  K+    L LF  M+ E    N F F++VL  L    +V    Q+H + +KNG  
Sbjct: 182 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 241

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            + SV NAL++MY K   + DA   F+   D++SITW++M+ GY  +    +A + F++M
Sbjct: 242 SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSM 301

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L+G   +  TFV VI  C+        +Q+H  +LK G +    + T L+  Y+KC  +
Sbjct: 302 HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA K F  ++E  D+V WT+MI G++QNG  + A++ + +M  EG+ PN  T + +L A
Sbjct: 362 VDARKGFDYLQE-PDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKA 420

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +++      Q+HA  +K  +     +G+AL   Y K G L +   VF  +  +D+++W
Sbjct: 421 CSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISW 480

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-----KQF 502
           +AM++G +Q G  + A++++ ++  EG KP+  TF ++++AC+     VE+G       F
Sbjct: 481 NAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACS-HMGLVERGWGYFRMMF 539

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
               +  ++ +  C    +V + S+ G ++ A E
Sbjct: 540 DEFGMDPRVEHYAC----MVDILSRAGKLKEAIE 569



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 202/364 (55%), Gaps = 9/364 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLP----LFGSTLSSVLKT 87
           + +FD  P+RN V +  ++  Y    L  EAL LF  +RR        +F S LS++  T
Sbjct: 163 RKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSAL--T 220

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              L ++  G+Q+HC  VK+G    V+V  +LV +Y +  +++D  + F+  ++ N ++W
Sbjct: 221 LPELVNN--GKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITW 278

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +++++GYA++  +D+ L+LF  M + GI+P+ FTF  V+   +D G      QVH  ++K
Sbjct: 279 SAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK 338

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G E    V  AL+ MY K   + DAR  FD +++ D + W SM+ GYV N  + +A   
Sbjct: 339 LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSL 398

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           +  M + G      T  SV+K C++   L   +Q+H++ +K G   +  I + L   Y+K
Sbjct: 399 YGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAK 458

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG ++D + +F  M   +DV+SW AMISG  QNG    A+  F +M  EG +P+  T+  
Sbjct: 459 CGCLKDGTLVFRRM-PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVN 517

Query: 388 ILTA 391
           IL+A
Sbjct: 518 ILSA 521


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/632 (38%), Positives = 370/632 (58%), Gaps = 31/632 (4%)

Query: 236 VFDGMEDR-DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
           +F+   DR D  +WNS++A         E+   F+ M     +  RSTF   IK C+   
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +L   +Q H Q L  G + D  + + L+  YSKCGK+ +A  +F  +   +++V+WT++I
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPR-RNIVTWTSLI 155

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------------VH 401
           +G++QN     A+  F +   E    NG      + +   +S                VH
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
              IK   +K   V   LL+AY K G +  + KVF+ + EKD+V+W++M+A YAQ G + 
Sbjct: 216 GVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLST 275

Query: 462 GAVKIYR-QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
            A +++   L + G K NE T S+++ AC A   A+  G   H   IK    N + ++++
Sbjct: 276 DAFEVFHGMLKAGGGKYNEVTLSTLLLAC-AHEGALRVGMCLHDQVIKMGYVNNVIMATS 334

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           ++ MY K G  E A   F   +++++ SW +MI GY  HG  ++AL+VF +M    ++ +
Sbjct: 335 IIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPN 394

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITFI V+ AC+HAG ++EG ++F+ M +E+++ P +EHY CMVDL  RAG +++A ++I
Sbjct: 395 YITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLI 454

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
             M       +W ++LAACR              L  L P +   YVLL+N+YA  G W+
Sbjct: 455 KSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWK 514

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           +  R+R L+ DR + K  GYS +E+K + + FL GD  HPQ  +IY  LEELS +L++AG
Sbjct: 515 DVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAG 574

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y P+ + VL D+D+E KE I+  HSE+LA+AFG++ +  G+ + ++KNLRVCGDCHTVIK
Sbjct: 575 YVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIK 634

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LISK+  R+I+VRD  RFHHFK+GLCSCGDYW
Sbjct: 635 LISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 223/454 (49%), Gaps = 24/454 (5%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FDR+   +   +N L+ E  R     E+L  F  +R+L +    ST    +K+C  LFD 
Sbjct: 42  FDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDL 98

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+Q H + +  GF  D+ VS++L+D+Y +   + + R +FD++   N+V+WTSL++GY
Sbjct: 99  NSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGY 158

Query: 155 ARNKMNDRVLELFHRMQVE---------GIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
            +N      L +F     E         G   +S    +VL   +     A +  VH + 
Sbjct: 159 VQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVA 218

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           IK G + V  V N L+  Y K   V  +R VFD M ++D ++WNSM+A Y  N L  +AF
Sbjct: 219 IKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAF 278

Query: 266 ETFNNMGLA-GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
           E F+ M  A G +    T  +++  CA    LR+   LH QV+K G   +  + T ++  
Sbjct: 279 EVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDM 338

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KCG+ E A   F  M+E K+V SWTAMI+G+  +G    A++ F QM   GV+PN  T
Sbjct: 339 YCKCGQAEMARNAFDGMKE-KNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYIT 397

Query: 385 YSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
           +  +L A       +     F   +H  + N E        +++   + G + EA  + +
Sbjct: 398 FISVLAACSHAGFLEEGWRWFNAMSH--EYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIK 455

Query: 438 LID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            +   +D V W ++LA      D E A    R+L
Sbjct: 456 SMKVRRDFVLWGSLLAACRIHKDVELAEISAREL 489



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 21/349 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI---------RRLGLPLFGSTLSSV 84
           LFD  P+RN V +  L+  Y ++    EAL +F              +G  +    + SV
Sbjct: 139 LFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISV 198

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L  C  + +      VH   +K G  + + V  +L+D Y +   V   R+VFDDM E +V
Sbjct: 199 LSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDV 258

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VSW S+++ YA+N ++    E+FH M +  G K N  T ST+L   A EG +   + +H 
Sbjct: 259 VSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHD 318

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            VIK G      +  ++I MY K      AR  FDGM++++  +W +M+AGY  +    E
Sbjct: 319 QVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFARE 378

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL-- 321
           A + F  M  AG +    TF+SV+  C+    L    +       N +  ++N+  G+  
Sbjct: 379 ALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWF-----NAMSHEYNVEPGVEH 433

Query: 322 ---MV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
              MV    + G +++A  +   M+  +D V W ++++    +  ++LA
Sbjct: 434 YGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELA 482


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/683 (35%), Positives = 391/683 (57%), Gaps = 27/683 (3%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAV-QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
            KP+ F  S     L D+ I  T + Q++  ++  G +    +   L++       V  A
Sbjct: 72  FKPDKFYAS-----LIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCA 126

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R +FD   D D   WN++V  Y  +     A E +  M +A       +F  V+K C+  
Sbjct: 127 RKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSAL 186

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L + R++H Q+ ++G + D  ++ GL+  Y+KCG++  A+ +F  + + + +VSWT++
Sbjct: 187 PALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVD-RTIVSWTSI 245

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY 409
           ISG+ QNG    A+  F +M +  VRP+      +L A   V   +    +H  +IK   
Sbjct: 246 ISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGL 305

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           E  F +  +L + Y K G +  A   F  ++   ++ W+AM++GY + G  E A++++R 
Sbjct: 306 ECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRL 365

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           + S+ ++P+  T +S I AC A   ++E  +        ++  N + V+++L+  Y+K G
Sbjct: 366 MKSKNIRPDSITVTSSIAAC-AQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCG 424

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
           +++ A  VF R   +D+V W++M+ GY  HG  ++++ +F  MR+  +  + +TF+G++T
Sbjct: 425 SVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLT 484

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC ++GLV+EG   F  M  ++ I P  +HY+C+VDL  RAG L++A + +  MP     
Sbjct: 485 ACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGV 543

Query: 650 TVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
           +VW  +L+AC              RL SL P+++  YV LSN+YA++  W   A+VR LM
Sbjct: 544 SVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLM 603

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
            ++ + K  GYS IE+  K  +F AGD +HP+S +I+ ++E+L  RLK+AG+ P T  VL
Sbjct: 604 REKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVL 663

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
            D++ E  E  L  HSERLAIA+GL++TP G  L+I KNLR C +CH  IKLISKL  R+
Sbjct: 664 HDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVSRE 723

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           IVVRD  RFHHFK+G CSCGDYW
Sbjct: 724 IVVRDACRFHHFKDGACSCGDYW 746



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 226/473 (47%), Gaps = 15/473 (3%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q++ + + +G      +   LV+       V   R++FD   + +V  W +++  Y+R+ 
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                +E++ RMQV  + P+ F+F  VL   +    +    +VH  + ++G E    V N
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            L+++Y K   +  A AVF  + DR  ++W S+++GY  N   +EA   F+ M       
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
                VSV++     ++L   + +H  V+K G++ + ++   L   Y+KCG +  A   F
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           + + E   ++ W AMISG+++NG  + A+  F  M  + +RP+  T +  + A   +   
Sbjct: 333 NQV-ENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSL 391

Query: 399 QV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           ++      +I  + +     V T+L++ Y K G +D A  VF+ I +KD+V WSAM+ GY
Sbjct: 392 ELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGY 451

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHAC---SIKAK 510
              G    ++ ++  +   GV PN+ TF  ++ AC   S  VE+G   FH      I+ +
Sbjct: 452 GLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKN-SGLVEEGWDLFHRMRDYGIEPR 510

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHT 562
             +  CV    V +  + G+++ A            VS W +++     H H 
Sbjct: 511 HQHYACV----VDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHV 559



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 172/360 (47%), Gaps = 1/360 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD+ P  +   +N ++  Y R      A+ ++  ++   +   G +   VLK C  L
Sbjct: 127 RKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSAL 186

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR+VH +  + GF  DV V   LV LY +   +     VF  + +  +VSWTS++
Sbjct: 187 PALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSII 246

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+N      L +F  M+   ++P+     +VL    D   +     +H  VIK G E
Sbjct: 247 SGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLE 306

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  +L S+Y K   V  AR  F+ +E+   I WN+M++GYV N    EA E F  M
Sbjct: 307 CEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLM 366

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                     T  S I  CA    L LAR +   +  +    D  + T L+  Y+KCG +
Sbjct: 367 KSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSV 426

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A  +F  + + KDVV W+AM+ G+  +G    ++  F  M + GV PN  T+  +LTA
Sbjct: 427 DMARFVFDRIPD-KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTA 485


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/688 (35%), Positives = 382/688 (55%), Gaps = 20/688 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL  V+K+C  L     GR VH     +G A DV V ++L+ +Y     + D R  FD M
Sbjct: 143 TLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGM 202

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              + V W  ++ GY +       + LF  M+V G +PN  T +  L V A E  + + V
Sbjct: 203 PWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGV 262

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H++ +K G E   +V N L+SMY K + + DA  +F+ +   D +TWN M++G V N 
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNG 322

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  EA   F +M  +GA     T VS++        L+  +++H  +++N +  D  + +
Sbjct: 323 LLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVS 382

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC  +  A  ++   R + DVV  + +ISG++ NG  + A+  F  +  + ++
Sbjct: 383 ALVDIYFKCRDVRTARNLYDAARAI-DVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIK 441

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN  T + +L A  ++S      ++H ++++  YE    V +AL++ Y K G LD +  +
Sbjct: 442 PNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYI 501

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  +  KD V W++M++ ++Q G+ + A+ ++RQ+  EG+K N  T SS ++AC A   A
Sbjct: 502 FSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSAC-ASLPA 560

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H   IK  +   +   SAL+ MY+K GN+E A  VF+    ++ VSWNS+I  
Sbjct: 561 IYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISA 620

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HG  K+++     M+ +  + D +TF+ +I+AC HAGLV+EG Q F  M  E+ I P
Sbjct: 621 YGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAP 680

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            MEH++CMVDLYSR+G L+KA+  I  MPF   A +W  +L ACR              L
Sbjct: 681 RMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQEL 740

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L P +S  YVL+SN+ A  G W   ++VR+LM D K+ K  GYSW++V N ++ F+A 
Sbjct: 741 FKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVAS 800

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKP 749
           D SHP+S  IY+ L+ L   L++ GY P
Sbjct: 801 DKSHPESEDIYTSLKALLQELREEGYVP 828



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/590 (27%), Positives = 298/590 (50%), Gaps = 16/590 (2%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN---VSTSLVDLYMRTNNVEDGRRVFD 137
           L ++L+ C        G Q+H   V SG   + N   + T L+ +Y+      D   VF 
Sbjct: 35  LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 138 DMNES---NVVSWTSLLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADE 192
            +  +   + + W  L+ G+     +   +  + +M        P++ T   V+   A  
Sbjct: 95  ALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           G V+    VH      G      V +ALI MY  + ++RDAR  FDGM  RD + WN M+
Sbjct: 155 GAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMM 214

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            GY+       A   F NM ++G E   +T    + +CA   +L    QLHS  +K G++
Sbjct: 215 DGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLE 274

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            +  +   L+  Y+KC  ++DA ++F ++    D+V+W  MISG +QNG +D A+  FC 
Sbjct: 275 QEVAVANTLLSMYAKCRCLDDAWRLFELLPR-DDLVTWNGMISGCVQNGLLDEALGLFCD 333

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M R G RP+  T   +L A   ++      +VH +II+        + +AL++ Y K   
Sbjct: 334 MLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRD 393

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           +  A  +++     D+V  S +++GY   G +E A++++R L  + +KPN  T +SV+ A
Sbjct: 394 VRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPA 453

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C + S A+  G++ H   ++        V SAL+ MY+K G ++ +  +F +   +D V+
Sbjct: 454 CASIS-ALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVT 512

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           WNSMI  ++Q+G  ++AL++F++M  + ++++ +T    ++AC     +  G++   +++
Sbjct: 513 WNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVII 572

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            +  I   +   S ++D+Y++ G +E A+ +   MP     + W ++++A
Sbjct: 573 -KGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVS-WNSIISA 620



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 284/552 (51%), Gaps = 16/552 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD  P R+ V +N ++  Y +      A+ LF  +R  G     +TL+  L  C    D 
Sbjct: 199 FDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADL 258

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
           + G Q+H   VK G  ++V V+ +L+ +Y +   ++D  R+F+ +   ++V+W  ++SG 
Sbjct: 259 LSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGC 318

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +N + D  L LF  M   G +P+S T  ++L  L D   +    +VH  +I+N   +  
Sbjct: 319 VQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDA 378

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            + +AL+ +Y K + VR AR ++D     D +  +++++GYV N +  +A + F  +   
Sbjct: 379 FLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQ 438

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
             +    T  SV+  CA+   L L +++H  VL+N  +    + + LM  Y+KCG+++ +
Sbjct: 439 CIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLS 498

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             IFS M  +KD V+W +MIS   QNG    A++ F QM  EG++ N  T S  L+A  +
Sbjct: 499 HYIFSKM-SLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACAS 557

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +       ++H  IIK   +      +AL++ Y K G ++ A +VFE + +K+ V+W+++
Sbjct: 558 LPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSI 617

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-- 508
           ++ Y   G  + +V    ++  EG KP+  TF ++I+AC A +  VE+G Q   C  K  
Sbjct: 618 ISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISAC-AHAGLVEEGLQLFQCMTKEY 676

Query: 509 ---AKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKK 564
               ++ +  C    +V +YS+ G ++ A + +     K D   W +++     H + + 
Sbjct: 677 LIAPRMEHFAC----MVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVEL 732

Query: 565 ALEVFKEMRRQD 576
           A    +E+ + D
Sbjct: 733 ADIASQELFKLD 744



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 227/461 (49%), Gaps = 40/461 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+  P+ + V +N ++    ++ L  EAL LF  + R G      TL S+L     L  
Sbjct: 299 LFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNG 358

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G++VH   +++    D  + ++LVD+Y +  +V   R ++D     +VV  ++++SG
Sbjct: 359 LKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISG 418

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N M+++ L++F  +  + IKPN+ T ++VL   A    +    ++H  V++N  E  
Sbjct: 419 YVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGK 478

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +AL+ MY K   +  +  +F  M  +D +TWNSM++ +  N    EA + F  M +
Sbjct: 479 CYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCM 538

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +    T  S +  CA+   +   +++H  ++K  I  D    + L+  Y+KCG ME 
Sbjct: 539 EGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMEL 598

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M + K+ VSW ++IS +  +G +  +V+F  +M  EG +P+  T+        
Sbjct: 599 ALRVFEFMPD-KNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTF-------- 649

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA-----WS 448
                                   AL++A    G+++E  ++F+ + ++ ++A     ++
Sbjct: 650 -----------------------LALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFA 686

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            M+  Y++ G  + A++    +     KP+   + ++++AC
Sbjct: 687 CMVDLYSRSGRLDKAIQFIADMP---FKPDAGIWGALLHAC 724


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 273/836 (32%), Positives = 446/836 (53%), Gaps = 42/836 (5%)

Query: 26  FYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVL 85
           F   + + LFD  P R+ V +  +L  + +   H +AL LF  +   G      TLSS L
Sbjct: 63  FGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSAL 122

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN--NVEDGRRVFDDMNESN 143
           ++C  L +   G Q+HC  VK G   +  V TSLV+ Y +    +VE  + +    +  +
Sbjct: 123 RSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGD 182

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VVSWT++LS    N       E++ +M   G+ PN FTF  +LG ++    ++    +H 
Sbjct: 183 VVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHA 242

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            +I  G E+   +  A++ MY K + + DA  V +   + D   W ++++G+  N    E
Sbjct: 243 HLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVRE 302

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A   F +M L+G      T+ S++   ++   L L  Q HS+V+  G++ D  I   L+ 
Sbjct: 303 AISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVD 362

Query: 324 AYSKCGKME-DASKIFSMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
            Y KC  +  +A K+F   RE+   +V+ WT++I+G  +    D +   F +M   GVRP
Sbjct: 363 MYMKCSHITTNAVKVF---REITSPNVMCWTSLIAGFAEKRLED-SFQLFAEMQAAGVRP 418

Query: 381 NGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N FT S IL A    +  V    +H HIIKT  +   +V  AL++ Y   G++DEA  V 
Sbjct: 419 NSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVI 478

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             ++ +D + ++ + A   Q G    A+K+   + ++G+K +EF+ +S ++A  A    +
Sbjct: 479 GTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSA-AAGLGTM 537

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E GKQ H  S+K+       VS++LV +YSK G+I  A+  FK   + D  SWN +I G+
Sbjct: 538 ETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGF 597

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           + +G    AL  F +MR   ++ D IT + +I+AC+H GL++ G +YF  M  E+HI P 
Sbjct: 598 SWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPK 657

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLI 662
           ++HY C+VDL  R G LE+AM +I +M F   + + +T+L AC              R +
Sbjct: 658 LDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCL 717

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            L P D AIY+LL+N+Y   G      + R+LM +R +++  G  W+E++++ + F AG+
Sbjct: 718 ELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGE 777

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
                 ++I  KLE L T  ++  Y+       Q+ +D+        H E+LA+AFG++ 
Sbjct: 778 --KINEDEITEKLEFLITEFRNRRYQ------YQENEDKF------YHPEQLAVAFGVLN 823

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            P+ +P++I KN  +C  CHT I L +++  R+I++RD  RFH FK+G CSC D +
Sbjct: 824 APSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIF 879



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 159/554 (28%), Positives = 273/554 (49%), Gaps = 25/554 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  +H   +K G   D+ ++ +L+ LY +T  V   R +FD+M   +VVSWT++LS + +
Sbjct: 33  GICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTK 92

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
            K +   L+LF  M   G  PN FT S+ L      G     +Q+H   +K G E+   V
Sbjct: 93  TKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFV 152

Query: 217 CNALISMYLKSKMVR-DARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
             +L+  Y K      +A  +   ++D  D ++W +M++  V N    EAFE +  M  +
Sbjct: 153 GTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIES 212

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G      TFV ++   ++   L   + LH+ ++  G + +  ++T ++  YSKC +M DA
Sbjct: 213 GVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDA 272

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            K+ ++  E  DV  WT +ISG  QN  +  A++ F  M   G+ PN FTYS +L A  +
Sbjct: 273 IKVSNLTPEY-DVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSS 331

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSA 449
           +       Q H+ +I    E    +G AL++ Y+K   I   A KVF  I   +++ W++
Sbjct: 332 ILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTS 391

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++AG+A+    E + +++ ++ + GV+PN FT S+++ AC+   + V      H   IK 
Sbjct: 392 LIAGFAE-KRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPT-MMLHGHIIKT 449

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
           K++  + V++ALV  Y+  G I+ A  V      RD +++  +     Q GH   AL+V 
Sbjct: 450 KVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVL 509

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-------SC 622
             M    ++ D  +    ++A    G ++ G+Q         H Y     +       + 
Sbjct: 510 IHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQL--------HCYSVKSGFQRCHSVSNS 561

Query: 623 MVDLYSRAGMLEKA 636
           +V LYS+ G +  A
Sbjct: 562 LVHLYSKCGSIHDA 575



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 83/177 (46%), Gaps = 8/177 (4%)

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           V++ C + S  +++G   H+  IK  L + L +++ L+++Y+K   +  A  +F     R
Sbjct: 21  VLSFCNSNS--LKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNR 78

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D+VSW +++  + +  H   AL++F  M       +  T    + +C   G  + G Q  
Sbjct: 79  DVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQ-- 136

Query: 605 DIMVNEHHIYPTMEHY--SCMVDLYSRAGMLE-KAMDIINRMPFAASATVWRTVLAA 658
            I  +   +   M  +  + +V+ Y++ G    +A  +++ +        W T+L++
Sbjct: 137 -IHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSS 192


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/717 (35%), Positives = 406/717 (56%), Gaps = 22/717 (3%)

Query: 60  QEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTS 118
           +EAL +F+ + R+ G       L+SV++ C  L     G Q+H   V+SGF +DV V TS
Sbjct: 18  EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+D Y +  B+E  R VFD + E   V+WT++++GY +   +   LELF +M+   + P+
Sbjct: 78  LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
            +  S+VL   +    +    Q+H  V++ G E+  SV N LI  Y K   V+  R +FD
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M  ++ I+W +M++GY+ N    EA + F  M   G +       SV+  C + + L  
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            RQ+H+  +K  ++ +  ++ GL+  Y+K   + DA K+F +M E ++V+S+ AMI G+ 
Sbjct: 258 GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAE-QNVISYNAMIEGYS 316

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
               +  A+  F +M      P+  T+  +L    ++       Q+H  IIK        
Sbjct: 317 SQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLF 376

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
            G+AL++ Y K   + +A  VFE ++EKDIV W+AM  GY Q  + E A+K+Y  L    
Sbjct: 377 AGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSR 436

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
            KPNEFTF+++I A +   A++  G+QFH   +K  L+    V++ALV MY+K G+IE A
Sbjct: 437 QKPNEFTFAALITAASNL-ASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA 495

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            ++F     RD+V WNSMI  +AQHG  ++AL +F+EM ++ ++ + +TF+ V++AC+HA
Sbjct: 496 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 555

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           G V++G  +F+ M     I P  EHY+C+V L  R+G L +A + I +MP   +A VWR+
Sbjct: 556 GXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 614

Query: 655 VLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
           +L+ACR+              IS  P DS  Y+LLSN++A+ G W +  +VR  M+  +V
Sbjct: 615 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEV 674

Query: 701 KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
            KE G SWIEV NK   F+A   +H +++ I S L+ L   +K AGY PD + +L +
Sbjct: 675 VKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGYVPDATALLMN 731



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 166/542 (30%), Positives = 286/542 (52%), Gaps = 20/542 (3%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK       + +FD+  ++  V +  ++  Y +      +L LF  +R   +      
Sbjct: 81  FYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYV 140

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           +SSVL  C  L     G+Q+H   ++ G   DV+V   L+D Y + N V+ GR++FD M 
Sbjct: 141 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 200

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             N++SWT+++SGY +N  +   ++LF  M   G KP+ F  ++VL        +    Q
Sbjct: 201 VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQ 260

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH   IK   E    V N LI MY KS ++ DA+ VFD M +++ I++N+M+ GY + E 
Sbjct: 261 VHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEK 320

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA E F+ M +     +  TFVS++ + A+   L L++Q+H  ++K G+  D    + 
Sbjct: 321 LSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSA 380

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  YSKC  ++DA  +F  M E KD+V W AM  G+ Q+   + A+  +  +     +P
Sbjct: 381 LIDVYSKCSYVKDARHVFEEMNE-KDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKP 439

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N FT++ ++TA   ++      Q H  ++K   +    V  AL++ Y K G ++EA K+F
Sbjct: 440 NEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF 499

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
                +D+V W++M++ +AQ G+ E A+ ++R++  EG++PN  TF +V++AC+  +  V
Sbjct: 500 NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS-HAGXV 558

Query: 497 EQG-KQFHAC---SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNS 551
           E G   F++     IK    +  CV    V++  + G +  A E  ++   +   + W S
Sbjct: 559 EDGLNHFNSMPGFGIKPGTEHYACV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 614

Query: 552 MI 553
           ++
Sbjct: 615 LL 616


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/624 (37%), Positives = 373/624 (59%), Gaps = 20/624 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A ++F  +++ DS  +N M+ G+   +   EA   F  M     +    TF  ++K+C+ 
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
            + L    Q+H+ ++K G      ++  L+  Y+ CG++E A ++F  M E ++V +W +
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSE-RNVRTWNS 195

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           M +G+ ++G  +  V  F +M    +R +  T   +LTA   ++  ++   I +   EK 
Sbjct: 196 MFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255

Query: 413 F----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                ++ T+L++ Y K G +D A ++F+ +D +D+VAWSAM++GY+Q      A+ ++ 
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           ++    + PNE T  S++++C A   A+E GK  H    K ++   + + +AL+  Y+K 
Sbjct: 316 EMQKANIDPNEITMVSILSSC-AVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKC 374

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G++ES+ EVF +   ++++SW  +I G A +G  KKALE F  M  +++E + +TFIGV+
Sbjct: 375 GSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVL 434

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
           +AC+HAGLVDEG+  F  M  +  I P +EHY CMVD+  RAG++E+A   I  MP   +
Sbjct: 435 SACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPN 494

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A +WRT+LA+C+              LI L+P  S  Y+LLSN+YA+ G W++  +VR  
Sbjct: 495 AVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGE 554

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M ++ +KK  G S IE+    + F A D  H QS +IY+ +E++  ++K AGY P+T+  
Sbjct: 555 MKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEA 614

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
             D +++ KE+ +S HSE+LAIAFGL+ +P G  ++I KNLRVC DCH   KL+SK+  R
Sbjct: 615 RLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNR 674

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +IVVRD  RFHHFKEG CSC DYW
Sbjct: 675 EIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 179/362 (49%), Gaps = 7/362 (1%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F +  + +   YN ++  +       EA+ LF  +    +     T   +LK C  L 
Sbjct: 79  SIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQ 138

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G Q+H   +K GF     V  +L+ +Y     VE  RRVFD+M+E NV +W S+ +
Sbjct: 139 ALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFA 198

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNG 209
           GY ++   + V++LFH M    I+ +  T  +VL   G LAD   +     ++  V + G
Sbjct: 199 GYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLAD---LELGEWINRYVEEKG 255

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +   ++  +L+ MY K   V  AR +FD M+ RD + W++M++GY       EA + F+
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M  A  +    T VS++  CA    L   + +H  + K  +     + T LM  Y+KCG
Sbjct: 316 EMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCG 375

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E + ++F  M  +K+V+SWT +I G   NG    A+ +F  M  + V PN  T+  +L
Sbjct: 376 SVESSIEVFGKM-PVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVL 434

Query: 390 TA 391
           +A
Sbjct: 435 SA 436



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 7/326 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD   +RN   +N +   Y +    +E + LF  +  L +     TL SVL  CG L D
Sbjct: 181 VFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLAD 240

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  ++    + G   +  + TSLVD+Y +   V+  RR+FD M+  +VV+W++++SG
Sbjct: 241 LELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISG 300

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y++       L+LFH MQ   I PN  T  ++L   A  G + T   VH  + K   ++ 
Sbjct: 301 YSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLT 360

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            ++  AL+  Y K   V  +  VF  M  ++ ++W  ++ G  +N    +A E F  M  
Sbjct: 361 VTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLE 420

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT---GLMV-AYSKCG 329
              E    TF+ V+  C+    +   R L   + +   DF    R    G MV    + G
Sbjct: 421 KNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSR---DFGIEPRIEHYGCMVDILGRAG 477

Query: 330 KMEDASKIFSMMREMKDVVSWTAMIS 355
            +E+A +    M    + V W  +++
Sbjct: 478 LIEEAFQFIKNMPIQPNAVIWRTLLA 503



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 37/189 (19%), Positives = 80/189 (42%), Gaps = 34/189 (17%)

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +K K+   L  S+A++   S    ++ A  +F++  + D  ++N MI G+       +A+
Sbjct: 54  LKPKVAENLLESAAILLPTS----MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAI 109

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV----NEHHIYPTMEHYSC 622
            +FKEM    ++ D  TF  ++  C+    + EG+Q   +++      H         + 
Sbjct: 110 LLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVK-----NT 164

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAAT 682
           ++ +Y+  G +E A  + + M    +   W ++ A                     Y  +
Sbjct: 165 LIHMYANCGEVEVARRVFDEMS-ERNVRTWNSMFAG--------------------YTKS 203

Query: 683 GHWQERARV 691
           G+W+E  ++
Sbjct: 204 GNWEEVVKL 212


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/636 (37%), Positives = 376/636 (59%), Gaps = 30/636 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N +IS +    +V  AR  FD   ++D+++WN M+A YV N    EA   FN+      E
Sbjct: 10  NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR----TE 65

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA-YSKCGKMEDASK 336
               ++ +++       ++  AR+L  ++    +     +   +MV+ Y++ G M +A +
Sbjct: 66  WDVISWNALMSGYVQWGKMSEARELFDRMPGRDV-----VSWNIMVSGYARRGDMVEARR 120

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F     ++DV +WTA++SG+ QNG ++ A   F  M       N  +++ ++ A     
Sbjct: 121 LFDAA-PVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRR 175

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
                  +      ++ +    +L  Y + G+L+EA  VF+ + +KD V+W+AMLA Y+Q
Sbjct: 176 MMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQ 235

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G +E  ++++ ++   G   N   F+ V++ C A  AA+E G Q H   I+A       
Sbjct: 236 GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTC-ADIAALECGMQLHGRLIRAGYGVGCF 294

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V +AL+ MY K GN+E A   F+   +RD+VSWN+MI GYA+HG  K+ALE+F  MR   
Sbjct: 295 VGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTS 354

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
            + D IT +GV+ AC+H+GLV++G  YF  M ++  +    EHY+CM+DL  RAG L +A
Sbjct: 355 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA 414

Query: 637 MDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAAT 682
            D++  MPF   +T+W  +L A R+                L+P ++ +YVLLSN+YA++
Sbjct: 415 HDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASS 474

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G W++  ++R +M +R VKK  G+SWIEV+NK ++F AGD  HP+  +IY+ LE+L  R+
Sbjct: 475 GKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRM 534

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           K AGY   T  VL D+++E KE +L  HSE+LA+A+G++  P G P++++KNLRVCGDCH
Sbjct: 535 KKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCH 594

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              K IS +E R I++RD+NRFHHF+ G CSCGDYW
Sbjct: 595 NAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 198/466 (42%), Gaps = 83/466 (17%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC---- 90
           FD +P+++ V +N +L  Y R+   +EA  LF       +  + + +S  ++        
Sbjct: 29  FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 88

Query: 91  -LFDHVFGRQV-HCECVKSGFAR-----------------DVNVSTSLVDLYMRTNNVED 131
            LFD + GR V     + SG+AR                 DV   T++V  Y +   +E+
Sbjct: 89  ELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEE 148

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
            RRVFD M E N VSW ++++ Y + +M D   ELF+ M    +                
Sbjct: 149 ARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV---------------- 192

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
                                  +  N +++ Y ++ M+ +A+AVFD M  +D+++W +M
Sbjct: 193 -----------------------ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAM 229

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +A Y       E  + F  MG  G  + RS F  V+  CA    L    QLH ++++ G 
Sbjct: 230 LAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGY 289

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
                +   L+  Y KCG MEDA   F  M E +DVVSW  MI+G+ ++G    A+  F 
Sbjct: 290 GVGCFVGNALLAMYFKCGNMEDARNAFEEMEE-RDVVSWNTMIAGYARHGFGKEALEIFD 348

Query: 372 QMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
            M     +P+  T   +L A       +  +S F    H      +      T +++   
Sbjct: 349 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY--TCMIDLLG 406

Query: 425 KKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           + G L EA  +  ++  E D   W A+L          GA +I+R 
Sbjct: 407 RAGRLAEAHDLMKDMPFEPDSTMWGALL----------GASRIHRN 442



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 210/432 (48%), Gaps = 34/432 (7%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH-RMQVEGIKPNSFTFSTVLGVLAD 191
           R  FD   E + VSW  +L+ Y RN   +    LF+ R + + I  N+     V      
Sbjct: 26  RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYV-----Q 80

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
            G ++ A ++   +   G +VV+   N ++S Y +   + +AR +FD    RD  TW ++
Sbjct: 81  WGKMSEARELFDRM--PGRDVVS--WNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 136

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           V+GY  N +  EA   F+ M     E    ++ +++      + +  A++L + +    +
Sbjct: 137 VSGYAQNGMLEEARRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV 192

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
              + + TG    Y++ G +E+A  +F  M + KD VSW AM++ + Q G  +  +  F 
Sbjct: 193 ASWNTMLTG----YAQAGMLEEAKAVFDTMPQ-KDAVSWAAMLAAYSQGGCSEETLQLFI 247

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           +M R G   N   ++ +L+    ++      Q+H  +I+  Y     VG ALL  Y K G
Sbjct: 248 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCG 307

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            +++A   FE ++E+D+V+W+ M+AGYA+ G  + A++I+  + +   KP++ T   V+ 
Sbjct: 308 NMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 367

Query: 488 ACTAPSAAVEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
           AC+  S  VE+G  +     H   + AK  +  C    ++ +  + G +  A ++ K   
Sbjct: 368 ACSH-SGLVEKGISYFYSMHHDFGVTAKPEHYTC----MIDLLGRAGRLAEAHDLMKDMP 422

Query: 543 -KRDLVSWNSMI 553
            + D   W +++
Sbjct: 423 FEPDSTMWGALL 434



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 159/359 (44%), Gaps = 46/359 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-----IRRLGLPLFGSTLSSVLK 86
           + LFDR P R+ V +N ++  Y R     EA  LF       +      + G   + +L+
Sbjct: 88  RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE 147

Query: 87  TCGCLFDHVFGRQ-VHCECVKSGF-----------------ARDVNVSTSLVDLYMRTNN 128
               +FD +  R  V    + + +                  R+V    +++  Y +   
Sbjct: 148 EARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGM 207

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           +E+ + VFD M + + VSW ++L+ Y++   ++  L+LF  M   G   N   F+ VL  
Sbjct: 208 LEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLST 267

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
            AD   +   +Q+H  +I+ G  V   V NAL++MY K   + DAR  F+ ME+RD ++W
Sbjct: 268 CADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSW 327

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
           N+M+AGY  +    EA E F+ M     +    T V V+  C+           HS +++
Sbjct: 328 NTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS-----------HSGLVE 376

Query: 309 NGIDFDHNIR------------TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
            GI + +++             T ++    + G++ +A  +   M    D   W A++ 
Sbjct: 377 KGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 435



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 9/288 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ +++FD  PQ++ V +  +L  Y +    +E L LF+ + R G  +  S  + VL TC
Sbjct: 209 EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTC 268

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G Q+H   +++G+     V  +L+ +Y +  N+ED R  F++M E +VVSW 
Sbjct: 269 ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWN 328

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           ++++GYAR+      LE+F  M+    KP+  T   VL   +  G+V   +   ++M   
Sbjct: 329 TMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 388

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG---YVTNELHME 263
            G          +I +  ++  + +A  +   M  + DS  W +++     +   EL   
Sbjct: 389 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRS 448

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           A E    +    A +    +V +  + A++ + R AR++   + + G+
Sbjct: 449 AAEKIFELEPENAGM----YVLLSNIYASSGKWRDARKMRVMMEERGV 492



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 126/260 (48%), Gaps = 18/260 (6%)

Query: 384 TYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           TY++++++        +  H      EK       +L AYV+ G ++EA  +F    E D
Sbjct: 8   TYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWD 67

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +++W+A+++GY Q G    A +++ ++    V     +++ +++        VE  + F 
Sbjct: 68  VISWNALMSGYVQWGKMSEARELFDRMPGRDV----VSWNIMVSGYARRGDMVEARRLFD 123

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A  ++      +   +A+V+ Y++ G +E A  VF    +R+ VSWN+M+  Y Q     
Sbjct: 124 AAPVR-----DVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMD 178

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +A E+F  M  +++     ++  ++T    AG+++E +  FD M  +  +      ++ M
Sbjct: 179 EAKELFNMMPCRNV----ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV-----SWAAM 229

Query: 624 VDLYSRAGMLEKAMDIINRM 643
           +  YS+ G  E+ + +   M
Sbjct: 230 LAAYSQGGCSEETLQLFIEM 249


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/668 (36%), Positives = 378/668 (56%), Gaps = 53/668 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            ++I+ +L+++ + +AR VFD +   D   +  M+ GY  N     A + F  M +    
Sbjct: 15  QSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV- 73

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQV----------------------LKNGIDFDH 315
               ++ S+IK C    +L +AR+L  ++                      +  G+ +  
Sbjct: 74  ---VSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM 130

Query: 316 NIR-----TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
             R       ++  Y   G++ED  ++F  M   ++V+SWT+MI G  Q+G  + A+  F
Sbjct: 131 PFRDIAAWNSMIYGYCCNGRVEDGLRLFQEM-PCRNVISWTSMIGGLDQHGRSEEALGLF 189

Query: 371 CQMTREGV--RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYV 424
            QM   GV  +P   TY  ++TA    S      Q+HAH+ K  Y     +  AL+  Y 
Sbjct: 190 RQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA 249

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
               ++++ +VF      ++V W+A++ GY      E A+K++ ++  EGV PN+ +F+S
Sbjct: 250 NCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTS 309

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
            +N+C    A ++ G++ H  ++K  L   + V ++L+ MY + GN+     +FKR  K+
Sbjct: 310 ALNSCCGLEA-LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK 368

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           ++VSWNS+I G AQHG    AL  F +M R  +E D ITF G+++AC+H+G+  +G+  F
Sbjct: 369 NIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLF 428

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--- 661
                       ++HY+CMVD+  R+G LE+A ++I  MP  A++ VW  +L+AC +   
Sbjct: 429 KYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 488

Query: 662 -----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                      I L+PH S+ YVLLSN+YA+   W + +R+R+ M  R + K+ G SWI 
Sbjct: 489 LEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 548

Query: 711 VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
           +K     FL+GD SHP S++IY KLE L  +LK+ GY PD  + L D++DE KE +LS H
Sbjct: 549 IKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYH 608

Query: 771 SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           SERLAI FGL++T  G+ + ++KNLRVCGDCH+ IKLI+K+ RR I+VRD+ RFHHF +G
Sbjct: 609 SERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDG 668

Query: 831 LCSCGDYW 838
            CSCGDYW
Sbjct: 669 RCSCGDYW 676



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 224/458 (48%), Gaps = 44/458 (9%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IK 176
           S++  ++R   +++ R VFD ++  +V  +T +++GYARN   D  L+LF+ M V+  + 
Sbjct: 16  SMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVS 75

Query: 177 PNSFTFS-------TVLGVLADEGIVATAVQVHTMVIKNG----GEVVT----------- 214
            NS           T+   L DE    + V   TM+  NG    G++             
Sbjct: 76  WNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMI--NGFLQFGKIEVAEGLFYKMPFR 133

Query: 215 --SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             +  N++I  Y  +  V D   +F  M  R+ I+W SM+ G   +    EA   F  M 
Sbjct: 134 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 193

Query: 273 LAGAEL--TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
             G E+  T ST+  VI  CA    L    Q+H+ V K G  FD  I   L+  Y+ C +
Sbjct: 194 GCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQ 253

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           MED+ ++F     M +VV WTA+++G+  N   + A+  F +M REGV PN  +++  L 
Sbjct: 254 MEDSLRVFHGKLHM-NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN 312

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +   +       ++H   +K   E    VG +L+  Y + G L++   +F+ I +K+IV+
Sbjct: 313 SCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVS 372

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC- 505
           W++++ G AQ G    A+  + Q+    V+P+E TF+ +++AC+  S   ++G+      
Sbjct: 373 WNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACS-HSGMSQKGRCLFKYF 431

Query: 506 ----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
               S + KL++  C    +V +  + G +E A E+ +
Sbjct: 432 SENKSAEVKLDHYAC----MVDILGRSGKLEEAEELIR 465



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 147/283 (51%), Gaps = 3/283 (1%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD+    S++  Y     VEDG R+F +M   NV+SWTS++ G  ++  ++  L LF +M
Sbjct: 133 RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQM 192

Query: 171 QVEGI--KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
              G+  KP S T+  V+   A+   +   VQ+H  V K G      +  ALI+ Y   K
Sbjct: 193 MGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK 252

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            + D+  VF G    + + W ++V GY  N  H +A + F  M   G    +S+F S + 
Sbjct: 253 QMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN 312

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C   + L   R++H+  +K G++ D  +   L+V Y +CG + D   IF  + + K++V
Sbjct: 313 SCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISK-KNIV 371

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           SW ++I G  Q+G    A+ FF QM R  V P+  T++ +L+A
Sbjct: 372 SWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSA 414



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 7/338 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL--FGSTLSSVLKTCGCL 91
           LF   P RN + +  ++    +    +EAL LF  +   G+ +    ST   V+  C   
Sbjct: 157 LFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANA 216

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H    K G++ D  +S +L+  Y     +ED  RVF      NVV WT+L+
Sbjct: 217 SALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALV 276

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY  N  ++  L++F  M  EG+ PN  +F++ L        +    ++HT  +K G E
Sbjct: 277 TGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLE 336

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N+LI MY +   + D   +F  +  ++ ++WNS++ G   +   M A   FN M
Sbjct: 337 TDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQM 396

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG---IDFDHNIRTGLMVAYSKC 328
             +  E    TF  ++  C+ +   +  R L     +N    +  DH     ++    + 
Sbjct: 397 VRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDH--YACMVDILGRS 454

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           GK+E+A ++   M    + + W  ++S    +  +++A
Sbjct: 455 GKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVA 492



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 113/235 (48%), Gaps = 17/235 (7%)

Query: 408 NYEK--SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           NY K  +FS   +++  +++   +DEA  VF+ +   D+  ++ M+ GYA+    + A++
Sbjct: 5   NYTKFCTFSY-QSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQ 63

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++ ++  + V     +++S+I  C   +      K F     ++ ++      + ++  +
Sbjct: 64  LFYEMPVKDV----VSWNSMIKGCFDCADLTMARKLFDEMPERSVVS-----WTTMINGF 114

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
            + G IE A  +F +   RD+ +WNSMI GY  +G  +  L +F+EM  +++    I++ 
Sbjct: 115 LQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNV----ISWT 170

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEH-HIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
            +I      G  +E    F  M+     + PT   Y C++   + A  L + + I
Sbjct: 171 SMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQI 225


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/700 (36%), Positives = 393/700 (56%), Gaps = 58/700 (8%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDR---DSITWN 249
           + T  Q+H+++IK G      V + LI     S    +  A ++F+  +     +   WN
Sbjct: 41  INTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWN 100

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           S++ GY  +   + +   F+ M   G +    TF  + K C   K     +QLH+  LK 
Sbjct: 101 SLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKL 160

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIF--SMMRE------------------------ 343
            + F+ ++ T ++  Y+  G+M+ A  +F  S +R+                        
Sbjct: 161 ALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLF 220

Query: 344 ----MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
               +KDVVSW AMISG++Q+G  + A+  F +M    V PN  T  ++L+A       +
Sbjct: 221 DEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGE 280

Query: 400 VHAHI---IKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
           +   I   ++ N +  +  +  AL++ Y K G  D A ++F+ I+EKD+++W+ M+ GY+
Sbjct: 281 LGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYS 340

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
            +   E A+ ++  +    VKPN+ TF  +++AC A   A++ GK  HA  I   L N+ 
Sbjct: 341 YLSLYEEALALFEVMLRSNVKPNDVTFLGILHAC-ACLGALDLGKWVHA-YIDKNLRNSS 398

Query: 516 CVS--SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
             S  ++L+ MY+K G IE+A  VF+    R+L SWN+M+ G+A HGH ++AL +F EM 
Sbjct: 399 NASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMV 458

Query: 574 RQDL-EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
            + L   D ITF+GV++ACT AGLVD G QYF  M+ ++ I P ++HY CM+DL +RA  
Sbjct: 459 NKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEK 518

Query: 633 LEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNM 678
            E+A  ++  M       +W ++L+AC              RL  L+P ++  +VLLSN+
Sbjct: 519 FEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNI 578

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           YA  G W + AR+R  +ND+ +KK  G + IE+    + FL GD  HP+ N IY  L E+
Sbjct: 579 YAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEV 638

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
              L++ G+ P+TS VL D+D+E KE  LSQHSE+LAI+FGL+ T  G  ++IVKNLRVC
Sbjct: 639 DKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVC 698

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G+CH+  KLISK+  R+I+ RD NRFHHFK+G CSC D W
Sbjct: 699 GNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 234/514 (45%), Gaps = 54/514 (10%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDL--YMRTNNVEDGRRVFDD---MNESNVVSWTSLLS 152
           +Q+H   +K+G    V V + L+       + ++     +F++    ++ NV  W SL+ 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY+ +      L LF RM   G++PNS TF  +              Q+H   +K     
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT-----------NELH 261
              V  ++I MY     +  AR VFD    RD++++ +++ GYV+           +E+ 
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 262 M--------------------EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           +                    EA   F  M  A     +ST V V+  C  T+   L + 
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           + S V  NG   +  +   L+  Y KCG+ + A ++F  + E KDV+SW  MI G+    
Sbjct: 285 IGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEE-KDVISWNTMIGGYSYLS 343

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKS-FSVG 416
             + A+  F  M R  V+PN  T+  IL A   +        VHA+I K     S  S+ 
Sbjct: 344 LYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLW 403

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV- 475
           T+L++ Y K G ++ A +VF  +  +++ +W+AML+G+A  G  E A+ ++ ++ ++G+ 
Sbjct: 404 TSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLF 463

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGN 530
           +P++ TF  V++ACT  +  V+ G Q+         I  KL +  C    ++ + ++   
Sbjct: 464 RPDDITFVGVLSACTQ-AGLVDLGHQYFRSMIQDYGISPKLQHYGC----MIDLLARAEK 518

Query: 531 IESASEVFKR-QRKRDLVSWNSMICGYAQHGHTK 563
            E A  + K  + + D   W S++     HG  +
Sbjct: 519 FEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVE 552



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 211/440 (47%), Gaps = 47/440 (10%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM--VAYSKCGKMEDAS 335
           L +  ++++++ C   K +   +Q+HS ++K G++    +++ L+   A S  G +  A 
Sbjct: 26  LEQHPYLNLLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYAL 82

Query: 336 KIF--SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---- 389
            +F  +      +V  W ++I G+  + +   +++ F +M   GV+PN  T+  +     
Sbjct: 83  SLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCT 142

Query: 390 TAQPAVSPFQVHAHIIK-----------TNYEKSFSVG--------------------TA 418
            A+      Q+HAH +K           +      SVG                    TA
Sbjct: 143 KAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTA 202

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           L+  YV +G LD+A ++F+ I  KD+V+W+AM++GY Q G  E A+  + ++    V PN
Sbjct: 203 LITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPN 262

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           + T   V++AC    +  E GK   +        + L +++AL+ MY K G  + A E+F
Sbjct: 263 KSTMVVVLSACGHTRSG-ELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELF 321

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
               ++D++SWN+MI GY+     ++AL +F+ M R +++ + +TF+G++ AC   G +D
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALD 381

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G+     +            ++ ++D+Y++ G +E A  +   M  + +   W  +L+ 
Sbjct: 382 LGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSM-HSRNLASWNAMLSG 440

Query: 659 CRLISLQPHDSAIYVLLSNM 678
               ++  H      L S M
Sbjct: 441 ---FAMHGHAERALALFSEM 457



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 152/338 (44%), Gaps = 7/338 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P ++ V +N ++  Y +    +EA+  F  ++   +    ST+  VL  CG    
Sbjct: 219 LFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRS 278

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ +      +GF  ++ ++ +L+D+Y +    +  R +FD + E +V+SW +++ G
Sbjct: 279 GELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGG 338

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN-GGEV 212
           Y+   + +  L LF  M    +KPN  TF  +L   A  G +     VH  + KN     
Sbjct: 339 YSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSS 398

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             S+  +LI MY K   +  A  VF  M  R+  +WN+M++G+  +     A   F+ M 
Sbjct: 399 NASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMV 458

Query: 273 LAGAELTRS---TFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKC 328
             G  L R    TFV V+  C     + L  Q    ++++ GI         ++   ++ 
Sbjct: 459 NKG--LFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARA 516

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            K E+A  +   M    D   W +++S    +G ++  
Sbjct: 517 EKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFG 554



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 111/227 (48%), Gaps = 4/227 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD   +++ + +N ++  Y   SL++EAL LF  + R  +     T   +L  C CL
Sbjct: 318 RELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACL 377

Query: 92  FDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G+ VH    K+   + + ++ TSL+D+Y +   +E   RVF  M+  N+ SW ++
Sbjct: 378 GALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAM 437

Query: 151 LSGYARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           LSG+A +   +R L LF  M  +G+ +P+  TF  VL      G+V    Q    +I++ 
Sbjct: 438 LSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDY 497

Query: 210 G-EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
           G          +I +  +++   +A  +   ME + D   W S+++ 
Sbjct: 498 GISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSA 544


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/740 (32%), Positives = 409/740 (55%), Gaps = 59/740 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD  P+R+ V +N L+  Y  +  H++ +++FL + R+G     +T + VLK+C  L
Sbjct: 128 QKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSL 187

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            DH  G Q+H   VK GF  DV   ++L+D+Y +   ++   + F  M E N VSW++++
Sbjct: 188 EDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAII 247

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G  +N      LELF  MQ  G+  +  TF++V    A    +    Q+H   +K    
Sbjct: 248 AGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFG 307

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  A + MY+K   + DA+ +F+ + + +  ++N+++ GY  ++            
Sbjct: 308 TDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD------------ 355

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G  L   +     + CA  K      Q+H   +K+    +  +   ++  Y KCG +
Sbjct: 356 --KGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL 413

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A  +F  M   +D VSW A+I+ H QNG  +  ++ F                     
Sbjct: 414 VEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEEKTLSLF--------------------- 451

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                   +H  IIK+       VG AL++ Y K G++++A K+ + + E+ +V+W+A++
Sbjct: 452 --------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAII 503

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +G++    +E A K + ++   GV P+ FT++++++ C A    VE GKQ HA  IK +L
Sbjct: 504 SGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC-ANLVTVELGKQIHAQIIKKEL 562

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            +   +SS LV MYSK GN++    +F++   RD V+WN+M+CGYAQHG  ++AL++F+ 
Sbjct: 563 QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEY 622

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M+ ++++ +  TF+ V+ AC H GLV++G  YF  M++ + + P +EHYSC+VD+  R+G
Sbjct: 623 MQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSG 682

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
            + KA+++I  MPF A A +WRT+L+ C+              ++ L+P DSA YVLLSN
Sbjct: 683 QVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSN 742

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA  G W E  ++RK+M    +KKE G SWIE+K++ ++FL GD +HP+S +IY  L+ 
Sbjct: 743 IYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDV 802

Query: 738 LSTRLKDAGYKPDTSYVLQD 757
           L+  +K  GY PDT ++L D
Sbjct: 803 LTDEMKWVGYMPDTDFILND 822



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/562 (25%), Positives = 262/562 (46%), Gaps = 76/562 (13%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TFS +    +D   +    Q H  +I    +    V N LI MY+K   +  A  VFDGM
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 241 EDRDSITWNSM-------------------------------VAGYVTNELHMEAFETFN 269
             RD+++WN+M                               ++GY+ N  H +  + F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            MG  G    R+TF  V+K C++ ++     Q+H   +K G D D    + L+  Y+KC 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           K++ + + F  M E K+ VSW+A+I+G +QN  +   +  F +M + GV  +  T++ + 
Sbjct: 224 KLDCSIQFFHSMPE-KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            +   +S      Q+H H +KT++     +GTA L+ Y+K   L +A K+F  +   ++ 
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +++A++ GYA+              + +G+  +E + S    AC      +E G Q H  
Sbjct: 343 SYNAIIVGYAR--------------SDKGLGLDEVSLSGAFRACAVIKGDLE-GLQVHGL 387

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           S+K+   + +CV++A++ MY K G +  A  VF+    RD VSWN++I  + Q+G+ +K 
Sbjct: 388 SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKT 447

Query: 566 LEVFKEMR--RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           L +F   R  +  L  D    I +I   +  G++++ ++  D +  +     T+  ++ +
Sbjct: 448 LSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ-----TVVSWNAI 502

Query: 624 VDLYSRAGMLEKAMDIINR---MPFAASATVWRTVLAAC-RLISL----QPH-------- 667
           +  +S     E+A    ++   M        + T+L  C  L+++    Q H        
Sbjct: 503 ISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKEL 562

Query: 668 --DSAIYVLLSNMYAATGHWQE 687
             D+ I   L +MY+  G+ Q+
Sbjct: 563 QSDAYISSTLVDMYSKCGNMQD 584



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 225/523 (43%), Gaps = 86/523 (16%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           + TF  + + C+  K L   +Q H++++         +   L+  Y KC  +E A K+F 
Sbjct: 42  KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101

Query: 340 MMREMKDVVSWTAM-------------------------------ISGHLQNGAIDLAVN 368
            M + +D VSW AM                               ISG+L NG     ++
Sbjct: 102 GMPQ-RDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYV 424
            F QM R G   +  T++++L +  ++       Q+H   +K  ++     G+ALL+ Y 
Sbjct: 161 VFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           K   LD + + F  + EK+ V+WSA++AG  Q  D  G +++++++   GV  ++ TF+S
Sbjct: 221 KCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFAS 280

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           V  +C   S A+  G Q H  ++K      + + +A + MY K  N+  A ++F      
Sbjct: 281 VFRSCAGLS-ALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH 339

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           +L S+N++I GYA+                + L  D ++  G   AC       EG Q  
Sbjct: 340 NLQSYNAIIVGYAR--------------SDKGLGLDEVSLSGAFRACAVIKGDLEGLQVH 385

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----- 659
            + + +      +   + ++D+Y + G L +A  +   M  +  A  W  ++AA      
Sbjct: 386 GLSM-KSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGN 443

Query: 660 --RLISLQPH----------DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
             + +SL  H          DS + + L +MY+  G  ++  ++   + ++ V      S
Sbjct: 444 EEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTV-----VS 498

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           W    N   S  +      ++ + +SK+ E+       G  PD
Sbjct: 499 W----NAIISGFSLQKQSEEAQKTFSKMLEM-------GVDPD 530



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 118/227 (51%), Gaps = 2/227 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + L DR  ++  V +N ++  +      +EA   F  +  +G+     T +++L TC
Sbjct: 482 EKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC 541

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G+Q+H + +K     D  +S++LVD+Y +  N++D + +F+     + V+W 
Sbjct: 542 ANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWN 601

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           +++ GYA++ + +  L++F  MQ+E +KPN  TF  VL      G+V   +   H+M+  
Sbjct: 602 AMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSN 661

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
            G +      + ++ +  +S  V  A  + +GM  + D++ W ++++
Sbjct: 662 YGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 708


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 227/593 (38%), Positives = 362/593 (61%), Gaps = 22/593 (3%)

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E    M + G E+    + +++  C   + LR  +++H+ ++K        +RT L++ Y
Sbjct: 38  EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            KC  +EDA K+   M E K+VVSWTAMIS + Q G    A+  F +M R   +PN FT+
Sbjct: 98  GKCDCLEDARKVLDEMPE-KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +LT+    S      Q+H  I+K NY+    VG++LL+ Y K G + EA ++FE + E
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+V+ +A++AGYAQ+G  E A++++ +L SEG+ PN  T++S++ A +   A ++ GKQ
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG-LALLDHGKQ 275

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H   ++ +L     + ++L+ MYSK GN+  A  +F    +R  +SWN+M+ GY++HG 
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335

Query: 562 TKKALEVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMV-NEHHIYPTMEH 619
            ++ LE+F+ MR +  ++ D +T + V++ C+H  + D G   FD MV  E+   P  EH
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y C+VD+  RAG +++A + I RMP   +A V  ++L ACR              LI ++
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P ++  YV+LSN+YA+ G W +   VR +M  + V KE G SWI+ +   + F A D +H
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 515

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+  ++ +K++E+S ++K AGY PD S VL D+D+E KE +L  HSE+LA+ FGL+AT  
Sbjct: 516 PRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGE 575

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G P+++ KNLR+C DCH   K+ SK+  R++ +RD NRFH   +G+CSCGDYW
Sbjct: 576 GIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 179/361 (49%), Gaps = 11/361 (3%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GCL 91
           F  SP    ++    + + C +   QEAL   L +  LG  +      ++L  C     L
Sbjct: 12  FSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRAL 68

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G++VH   +K+ +     + T L+  Y + + +ED R+V D+M E NVVSWT+++
Sbjct: 69  RD---GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y++   +   L +F  M     KPN FTF+TVL        +    Q+H +++K   +
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V ++L+ MY K+  +++AR +F+ + +RD ++  +++AGY    L  EA E F+ +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G      T+ S++   +    L   +Q H  VL+  + F   ++  L+  YSKCG +
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILT 390
             A ++F  M E +  +SW AM+ G+ ++G     +  F  M  E  V+P+  T   +L+
Sbjct: 306 SYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364

Query: 391 A 391
            
Sbjct: 365 G 365



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 141/266 (53%), Gaps = 16/266 (6%)

Query: 18  PPKSLRSP---FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI 69
           P   LR+    FY K D     + + D  P++N V +  ++  Y +     EAL +F  +
Sbjct: 85  PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 144

Query: 70  RRL-GLP---LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR 125
            R  G P    F + L+S ++  G       G+Q+H   VK  +   + V +SL+D+Y +
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGL----GLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 200

Query: 126 TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
              +++ R +F+ + E +VVS T++++GYA+  +++  LE+FHR+  EG+ PN  T++++
Sbjct: 201 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASL 260

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L  L+   ++    Q H  V++        + N+LI MY K   +  AR +FD M +R +
Sbjct: 261 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA 320

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNM 271
           I+WN+M+ GY  + L  E  E F  M
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLM 346



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 10/174 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F+  P+R+ V    ++  Y +  L +EAL +F  +   G+     T +S+L   
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264

Query: 89  G--CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L DH  G+Q HC  ++        +  SL+D+Y +  N+   RR+FD+M E   +S
Sbjct: 265 SGLALLDH--GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVL-----GVLADEGI 194
           W ++L GY+++ +   VLELF  M+ E  +KP++ T   VL     G + D G+
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 276/847 (32%), Positives = 437/847 (51%), Gaps = 101/847 (11%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD-D 138
            L+  L++CG        R +H   V  G A  V +  +L+  Y+    + D RR+   D
Sbjct: 22  ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI-----------KP-NSFTFSTVL 186
           + E NV++   +++GYA+        ELF RM    +           +P  S+     L
Sbjct: 82  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141

Query: 187 GV--LADE-----------GIVATAVQVHTMVIKNGG-----------EVVTSVC-NALI 221
           G   LA +           G       +  M ++ G            E  T  C N+++
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           + Y K   +  A   F+ M +RD ++WN M+A    +    EA      M   G  L  +
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T+ S +  CA    L   +QLH++V+++    D  + + L+  Y+KCG  ++A ++F+ +
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSP 397
           ++ ++ VSWT +I G LQ      +V  F QM  E +  + F  + +++           
Sbjct: 322 QD-RNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 380

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            Q+H+  +K+ + ++  V  +L++ Y K G L  A  VF  + E+DIV+W++M+  Y+QI
Sbjct: 381 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 440

Query: 458 GDT-------------------------------EGAVKIYRQLTSE-GVKPNEFTFSSV 485
           G+                                E  +K+Y  + S+  V P+  T+ ++
Sbjct: 441 GNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 500

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
              C A   A + G Q    ++KA L   + V++A +TMYSK G I  A ++F     +D
Sbjct: 501 FRGC-ADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKD 559

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           +VSWN+MI GY+QHG  K+A + F +M  +  + D I+++ V++ C+H+GLV EG+ YFD
Sbjct: 560 VVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFD 619

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL---- 661
           +M   H I P +EH+SCMVDL  RAG L +A D+I++MP   +A VW  +L+AC++    
Sbjct: 620 MMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGND 679

Query: 662 ----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                       L   DS  Y+LL+ +Y+  G   + A+VRKLM D+ +KK  GYSW+EV
Sbjct: 680 ELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEV 739

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           +NK + F A D+SHPQ   I +K++EL  ++   GY          +  E   + +  HS
Sbjct: 740 ENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGY----------VRTESPRSEI-HHS 788

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+LA+AFG+++ PA  P+ I+KNLR+CGDCHTVIKLIS +  R+ V+RD  RFHHFK G 
Sbjct: 789 EKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGS 848

Query: 832 CSCGDYW 838
           CSCGDYW
Sbjct: 849 CSCGDYW 855



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 156/633 (24%), Positives = 287/633 (45%), Gaps = 73/633 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDS-------------LHQEALNLFLGIRRLGLPLFG 78
           + LFDR P+R+   +N L+ +  R +             L  + L LF      G P   
Sbjct: 107 EELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVE 166

Query: 79  STLSSVLKTCGC------LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG 132
           + L  +   CG       LF  +    + C               S++  Y +   ++  
Sbjct: 167 TALVDMFVRCGYVDFASRLFSQIERPTIFCR-------------NSMLAGYAKLYGIDHA 213

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
              F+DM E +VVSW  +++  +++      L L   M  +G++ +S T+++ L   A  
Sbjct: 214 IEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL 273

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             +    Q+H  VI++  ++   V +ALI +Y K    ++A+ VF+ ++DR+S++W  ++
Sbjct: 274 FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLI 333

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            G +  E   ++ E FN M      + +    ++I  C    +L L RQLHS  LK+G +
Sbjct: 334 GGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 393

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
               +   L+  Y+KCG +++A  +FS M E +D+VSWT+MI+ + Q G I  A  FF  
Sbjct: 394 RAIVVSNSLISLYAKCGDLQNAEFVFSSMSE-RDIVSWTSMITAYSQIGNIIKAREFFDG 452

Query: 373 MT---------------REGVRPNGFTYSIILTAQPAVSP-------------------- 397
           M                + G   +G      + +Q  V+P                    
Sbjct: 453 MATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKL 512

Query: 398 -FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             Q+  H +K     + SV  A +  Y K G + EA K+F+L++ KD+V+W+AM+ GY+Q
Sbjct: 513 GDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQ 572

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK-LNNAL 515
            G  + A K +  + S+G KP+  ++ +V++ C+  S  V++GK +     +   ++  L
Sbjct: 573 HGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS-HSGLVQEGKLYFDMMTRVHGISPGL 631

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKALEVFKEMRR 574
              S +V +  + G++  A ++  +   +     W +++     HG+ + A    K +  
Sbjct: 632 EHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFE 691

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
            D    G +++ +    + AG  D+  Q   +M
Sbjct: 692 LDSPDSG-SYMLLAKIYSDAGKSDDSAQVRKLM 723



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 176/382 (46%), Gaps = 55/382 (14%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ + +F+    RN V +  L+    +     +++ LF  +R   + +    L++++  C
Sbjct: 312 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 371

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   GRQ+H  C+KSG  R + VS SL+ LY +  ++++   VF  M+E ++VSWT
Sbjct: 372 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWT 431

Query: 149 SLLSGYARNKMNDRVLELF--------------------HRMQVEGIK------------ 176
           S+++ Y++     +  E F                    H  + +G+K            
Sbjct: 432 SMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVT 491

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+ T+    AD G      Q+    +K G  +  SV NA I+MY K   + +A+ +
Sbjct: 492 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 551

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  +D ++WN+M+ GY  + +  +A +TF++M   GA+    ++V+V+  C+     
Sbjct: 552 FDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS----- 606

Query: 297 RLARQLHSQVLKNG-IDFD-----HNIRTGL-----MV-AYSKCGKMEDASKIFSMMREM 344
                 HS +++ G + FD     H I  GL     MV    + G + +A  +   M   
Sbjct: 607 ------HSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMK 660

Query: 345 KDVVSWTAMISGHLQNGAIDLA 366
                W A++S    +G  +LA
Sbjct: 661 PTAEVWGALLSACKIHGNDELA 682


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/688 (35%), Positives = 385/688 (55%), Gaps = 20/688 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL  V+K+C  L     GR VH      G A DV V ++LV +Y     + + R  FD +
Sbjct: 143 TLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGI 202

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E + V W  ++ G  +    D  + LF  M+  G +PN  T +  L V A +  + +  
Sbjct: 203 PERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGA 262

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H++ +K G E   +V N L++MY K + + DA  +F+ M   D +TWN M++G V N 
Sbjct: 263 QLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNG 322

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L +EAF  F +M  +GA     T VS++        L+  +++H  +++N ++ D  + +
Sbjct: 323 LFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVS 382

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC  +  A  ++   R + DVV  + MISG++ NG  + A+  F  +  + ++
Sbjct: 383 ALVDIYFKCRDVRMAQNLYDAARAI-DVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIK 441

Query: 380 PNGFTYSIILT--AQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN  T + +L   A  A  P   Q+H ++++  YE+   V +AL++ Y K G LD +  +
Sbjct: 442 PNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYI 501

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  + +KD V W++M++ ++Q G  + A+ ++RQ+  EG+K N  T S+ ++AC A   A
Sbjct: 502 FLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSAC-ASLPA 560

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H  +IK  +   +   SAL+ MY+K GN+E A  VF+    ++ VSWNS+I  
Sbjct: 561 IYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISA 620

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HG  K+++ +   M+ +  + D +TF+ +I+AC HAGLV+EG Q F  M  ++ I P
Sbjct: 621 YGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAP 680

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            MEH++CMVDLYSR+G L+KA+  I  MPF   A +W  +L ACR              L
Sbjct: 681 RMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQEL 740

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L P +S  YVL+SN+ A  G W   ++VR+LM D K+ K  GYSW++V N ++ F+A 
Sbjct: 741 FKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVAS 800

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKP 749
           D SHP+S  IY+ L+ L   L++ GY P
Sbjct: 801 DKSHPESEDIYTSLKTLLQELREEGYVP 828



 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 282/552 (51%), Gaps = 16/552 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD  P+R+ V +N ++    +      A+ LF  +R  G     +TL+  L  C    D 
Sbjct: 199 FDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADL 258

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
           + G Q+H   VK G   +V V+ +L+ +Y +   ++D  R+F+ M + ++V+W  ++SG 
Sbjct: 259 LSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGC 318

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +N +      LF+ MQ  G +P+S T  ++L  L D   +    +VH  +++N   +  
Sbjct: 319 VQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDV 378

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            + +AL+ +Y K + VR A+ ++D     D +  ++M++GYV N +  EA + F  +   
Sbjct: 379 FLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQ 438

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
             +    T  SV+  CA+   L L +Q+H  VL+N  +    + + LM  Y+KCG+++ +
Sbjct: 439 CIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLS 498

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             IF  M + KD V+W +MIS   QNG    A++ F QM  EG++ N  T S  L+A  +
Sbjct: 499 HYIFLKMSQ-KDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACAS 557

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +       ++H   IK   +      +AL++ Y K G L+ A +VFE + +K+ V+W+++
Sbjct: 558 LPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSI 617

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-- 508
           ++ Y   G  + +V +   +  EG KP+  TF ++I+AC A +  VE+G Q   C  K  
Sbjct: 618 ISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISAC-AHAGLVEEGVQLFQCMTKKY 676

Query: 509 ---AKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKK 564
               ++ +  C    +V +YS+ G ++ A + +     K D   W +++     H + + 
Sbjct: 677 LIAPRMEHFAC----MVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVEL 732

Query: 565 ALEVFKEMRRQD 576
           A    +E+ + D
Sbjct: 733 ADIASQELFKLD 744



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 224/461 (48%), Gaps = 40/461 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+  PQ + V +N ++    ++ L  EA  LF  ++R G      TL S+L     L  
Sbjct: 299 LFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNG 358

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G++VH   V++    DV + ++LVD+Y +  +V   + ++D     +VV  ++++SG
Sbjct: 359 LKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISG 418

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N M++  L++F  +  + IKPN+ T ++VL   A    +    Q+H  V++N  E  
Sbjct: 419 YVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERK 478

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +AL+ MY K   +  +  +F  M  +D +TWNSM++ +  N    EA + F  M +
Sbjct: 479 CYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCM 538

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +    T  + +  CA+   +   +++H   +K  I  D    + L+  Y+KCG +E 
Sbjct: 539 EGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLEL 598

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M + K+ VSW ++IS +  +G +  +V+    M  EG +P+  T+        
Sbjct: 599 ALRVFEFMPD-KNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTF-------- 649

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA-----WS 448
                                   AL++A    G+++E  ++F+ + +K ++A     ++
Sbjct: 650 -----------------------LALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFA 686

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            M+  Y++ G  + A++    +     KP+   + ++++AC
Sbjct: 687 CMVDLYSRSGKLDKAIQFIADMP---FKPDAGIWGALLHAC 724



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 210/434 (48%), Gaps = 14/434 (3%)

Query: 220 LISMYLKSKMVRDARAVFDGME---DRDSITWNSMVAGYVTNELHMEAFETFNNMG--LA 274
           L+ MY+ ++  RDA AVF  +       S+ WN ++ G+     H  A   +  M    A
Sbjct: 76  LLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPA 135

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                  T   V+K CA    + L R +H      G+  D  + + L+  Y+  G + +A
Sbjct: 136 APSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNA 195

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL----T 390
              F  + E +D V W  M+ G ++ G +D AV  F  M   G  PN  T +  L    T
Sbjct: 196 RDAFDGIPE-RDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCAT 254

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
               +S  Q+H+  +K   E   +V   LL  Y K   LD+A ++FEL+ + D+V W+ M
Sbjct: 255 DADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGM 314

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           ++G  Q G    A  ++  +   G +P+  T  S++ A T  +  ++QGK+ H   ++  
Sbjct: 315 ISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLN-GLKQGKEVHGYIVRNC 373

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           +N  + + SALV +Y K  ++  A  ++   R  D+V  ++MI GY  +G +++AL++F+
Sbjct: 374 VNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFR 433

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD-IMVNEHHIYPTMEHYSCMVDLYSR 629
            +  Q ++ + +T   V+  C     +  GQQ    ++ N +     +E  S ++D+Y++
Sbjct: 434 YLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAK 491

Query: 630 AGMLEKAMDIINRM 643
            G L+ +  I  +M
Sbjct: 492 CGRLDLSHYIFLKM 505



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 163/337 (48%), Gaps = 12/337 (3%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN---IRTGLMVAYSKCGKMEDASKIFS 339
            ++V++ C +   L L  Q+H++ + +G   DHN   + T L+  Y    +  DA  +FS
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 340 MMREMKDVVS--WTAMISGHLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSIILTAQPAV 395
            +       S  W  +I G    G   LAV F+ +M        P+  T   ++ +  A+
Sbjct: 95  ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                   VH             VG+AL+  Y   G+L  A   F+ I E+D V W+ M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            G  + GD +GAV+++R + + G +PN  T +  ++ C A  A +  G Q H+ ++K  L
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVC-ATDADLLSGAQLHSLAVKCGL 273

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
              + V++ L+ MY+K   ++ A  +F+   + DLV+WN MI G  Q+G   +A  +F +
Sbjct: 274 EPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYD 333

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           M+R     D IT + ++ A T    + +G++    +V
Sbjct: 334 MQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIV 370


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/708 (35%), Positives = 385/708 (54%), Gaps = 92/708 (12%)

Query: 220 LISMYLKSKMVRDARAVFD--GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           ++S Y  S  +  AR+VF+   +  RD++ +N+M+ G+  N     A   F  M   G +
Sbjct: 86  MVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145

Query: 278 LTRSTFVSVIK-LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK----ME 332
               T+ SV+  L     + +   Q H+  LK+G  +  ++   L+  YS+C      + 
Sbjct: 146 PDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLH 205

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDL--------------------------- 365
            A K+F  + E KD  SWT M++G+++NG  DL                           
Sbjct: 206 SARKVFDDIPE-KDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNC 264

Query: 366 -----AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVG 416
                A+    +M   G+  + FTY  ++ A       Q    VHA++++   + SF   
Sbjct: 265 GLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFD 323

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY---------------------- 454
            +L+  Y K G  +EA  +FE +  KD+V+W+A+L+GY                      
Sbjct: 324 NSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383

Query: 455 ---------AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
                    A+ G  E  +K++  +  EG +P ++ FS  I +C A   A   G+QFHA 
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC-AVLGAYCNGQQFHAQ 442

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            +K   +++L   +AL+TMY+K G +E A +VF+     D VSWN++I    QHGH  +A
Sbjct: 443 LVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEA 502

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           ++V++EM ++ +  D ITF+ V+TAC+HAGLVD+G++YF+ M   + I P  +HY+ ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLID 562

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           L  R+G   +A  II  +PF  +A +W  +L+ CR              L  L P     
Sbjct: 563 LLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           Y+LLSNMYAATG W+E ARVRKLM DR VKKE   SWIE++ + ++FL  D SHP++  +
Sbjct: 623 YMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAV 682

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDID-DEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           Y  L++L   ++  GY PDTS+VL D++ D HKE +L+ HSE++A+AFGL+  P G  ++
Sbjct: 683 YKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIR 742

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           I KNLR CGDCH   + +SK+ +RDI++RD  RFHHF+ G CSCG++W
Sbjct: 743 IFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/513 (25%), Positives = 224/513 (43%), Gaps = 92/513 (17%)

Query: 32  QSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           +S+F+ +P   R+ V YN ++  +  ++    A+NLF  ++  G      T +SVL    
Sbjct: 100 RSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLA 159

Query: 90  CLF-DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN----VEDGRRVFDDMNESNV 144
            +  D     Q H   +KSG     +VS +LV +Y R  +    +   R+VFDD+ E + 
Sbjct: 160 LVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDE 219

Query: 145 VSWTSLLSGYARNKMND--------------------------------RVLELFHRMQV 172
            SWT++++GY +N   D                                  LE+  RM  
Sbjct: 220 RSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVS 279

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            GI+ + FT+ +V+   A+  ++    QVH  V++   +      N+L+++Y K     +
Sbjct: 280 SGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR-EDFSFHFDNSLVTLYYKCGKFNE 338

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVT-------------------------------NELH 261
           ARA+F+ M  +D ++WN++++GYV+                               N   
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            E  + F+ M   G E     F   IK CA        +Q H+Q++K G D   +    L
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNAL 458

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+KCG +E+A ++F  M  + D VSW A+I+   Q+G    AV+ + +M ++G+RP+
Sbjct: 459 ITMYAKCGVVEEAQQVFRTMPCL-DSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPD 517

Query: 382 GFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------------LLNAYVKKGIL 429
             T+  +LTA         HA ++    +   S+ T             L++   + G  
Sbjct: 518 RITFLTVLTACS-------HAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKF 570

Query: 430 DEAAKVFELIDEKDIVA-WSAMLAGYAQIGDTE 461
            EA  + E +  K     W A+L+G    G+ E
Sbjct: 571 SEAESIIESLPFKPTAEIWEALLSGCRVHGNME 603



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 212/482 (43%), Gaps = 110/482 (22%)

Query: 283 FVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           + + ++LC   +   L+LAR +H  ++  G     +I   L+  Y K  +++ A ++F  
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74

Query: 341 MRE--------------------------------MKDVVSWTAMISGHLQNGAIDLAVN 368
           + E                                M+D V + AMI+G   N     A+N
Sbjct: 75  ISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAIN 134

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAV-----SPFQVHAHIIKTNYEKSFSVGTALLNAY 423
            FC+M  EG +P+ FTY+ +L     V        Q HA  +K+      SV  AL++ Y
Sbjct: 135 LFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVY 194

Query: 424 VK----KGILDEAAKVFELIDEKD--------------------------------IVAW 447
            +      +L  A KVF+ I EKD                                +VA+
Sbjct: 195 SRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAY 254

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AM++GY   G  + A+++ R++ S G++ +EFT+ SVI AC A +  ++ GKQ HA  +
Sbjct: 255 NAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRAC-ANARLLQLGKQVHAYVL 313

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           + + + +    ++LVT+Y K G    A  +F++   +DLVSWN+++ GY   GH  +A  
Sbjct: 314 R-REDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372

Query: 568 VFKE-------------------------------MRRQDLEFDGITFIGVITACTHAGL 596
           +FKE                               M+R+  E     F G I +C   G 
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
              GQQ+   +V +     ++   + ++ +Y++ G++E+A  +   MP   S + W  ++
Sbjct: 433 YCNGQQFHAQLV-KIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVS-WNALI 490

Query: 657 AA 658
           AA
Sbjct: 491 AA 492



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 159/358 (44%), Gaps = 35/358 (9%)

Query: 43  FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHC 102
            V YN ++  Y    L+QEAL +   +   G+ L   T  SV++ C        G+QVH 
Sbjct: 251 LVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHA 310

Query: 103 ---------------------ECVKSGFAR---------DVNVSTSLVDLYMRTNNVEDG 132
                                +C K   AR         D+    +L+  Y+ + ++ + 
Sbjct: 311 YVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           + +F +M E N++SW  ++SG A N   +  L+LF  M+ EG +P  + FS  +   A  
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           G      Q H  ++K G +   S  NALI+MY K  +V +A+ VF  M   DS++WN+++
Sbjct: 431 GAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALI 490

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ---VLKN 309
           A    +   +EA + +  M   G    R TF++V+  C+    +   R+  +    V + 
Sbjct: 491 AALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRI 550

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
               DH  R  L+    + GK  +A  I   +        W A++SG   +G ++L +
Sbjct: 551 PPGADHYAR--LIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGI 606



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 151/370 (40%), Gaps = 92/370 (24%)

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           VH +II   ++    +   L++ Y K   LD A ++F+ I E D +A + M++GY   GD
Sbjct: 36  VHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 460 TE---------------------------------GAVKIYRQLTSEGVKPNEFTFSSVI 486
                                               A+ ++ ++  EG KP++FT++SV+
Sbjct: 96  IALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL 155

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN----IESASEVFKRQR 542
                     +Q  QFHA ++K+       VS+ALV++YS+  +    + SA +VF    
Sbjct: 156 AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIP 215

Query: 543 KRD--------------------------------LVSWNSMICGYAQHGHTKKALEVFK 570
           ++D                                LV++N+MI GY   G  ++ALE+ +
Sbjct: 216 EKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVR 275

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M    +E D  T+  VI AC +A L+  G+Q    ++       +    + +V LY + 
Sbjct: 276 RMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF--SFHFDNSLVTLYYKC 333

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERAR 690
           G   +A  I  +MP A     W  +L+                     Y ++GH  E   
Sbjct: 334 GKFNEARAIFEKMP-AKDLVSWNALLSG--------------------YVSSGHIGEAKL 372

Query: 691 VRKLMNDRKV 700
           + K M ++ +
Sbjct: 373 IFKEMKEKNI 382


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/588 (37%), Positives = 364/588 (61%), Gaps = 21/588 (3%)

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           +++ + GA+     + + I  C   + L   RQ+H+ ++K        + T L++ Y +C
Sbjct: 30  SSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRC 89

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++DA  +   M E ++VVSWTAMISG+ Q+G    A+  F +M R G + N FT + +
Sbjct: 90  GALDDARNVLDGMPE-RNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATV 148

Query: 389 LTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           LT+ P     Q    VH+ ++KTN+E    VG++LL+ Y K G + EA KVF+++ E+D 
Sbjct: 149 LTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDT 208

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+ +A+++GYAQ+G  + A+ ++RQL S G++ N  TF++++ + +   A++  GKQ H 
Sbjct: 209 VSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSG-LASLNYGKQVHG 267

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             ++ +L   + + ++L+ MYSK G +  +  VF    +R  +SWN+M+ GY +HG  ++
Sbjct: 268 LILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQE 327

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
            +++F+ M  ++++ D +T + V++ C+H GLVDEG   FD++V E +    + HY C++
Sbjct: 328 VVQLFRTMT-EEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVI 386

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           DL  R+G L+KA+D+I  MPF  +  +W ++L ACR              L+ ++P ++ 
Sbjct: 387 DLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAG 446

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YV+LSN+YAA G W++  RVRKLM +  V KE   SWI +    ++F + +  HP+   
Sbjct: 447 NYVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKD 506

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           I +K++E+   +K AG+ PD S VL D+DDE KE +L  HSE+LAI FGL+ TP G  +Q
Sbjct: 507 INAKIKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQ 566

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++KNLR+C DCH   K +SK+  R+I +RD NRFH  K+G C+CGDYW
Sbjct: 567 VMKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 165/295 (55%), Gaps = 2/295 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GRQVH   VK+ +   V ++T L+ LY+R   ++D R V D M E NVVSWT+++SGY++
Sbjct: 60  GRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQ 119

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +  +   LELF RM   G K N FT +TVL        +    QVH++V+K   E    V
Sbjct: 120 SGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFV 179

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY KS  +++AR VFD + +RD+++  ++++GY    L  EA + F  +  +G 
Sbjct: 180 GSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGM 239

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    TF +++   +    L   +Q+H  +L+  + F   ++  L+  YSKCGK+  + +
Sbjct: 240 QCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRR 299

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +F  M + +  +SW AM+ G+ ++G     V  F  MT E V+P+  T   +L+ 
Sbjct: 300 VFDNMPQ-RSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSG 352



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 163/295 (55%), Gaps = 6/295 (2%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH  ++K        +   LI +Y++   + DAR V DGM +R+ ++W +M++GY  + 
Sbjct: 62  QVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSG 121

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            H EA E F  M  AG +    T  +V+  C   + ++   Q+HS V+K   +    + +
Sbjct: 122 RHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGS 181

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y K G +++A K+F M+ E +D VS TA+ISG+ Q G  D A++ F Q+   G++
Sbjct: 182 SLLDMYGKSGNIQEARKVFDMLPE-RDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQ 240

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N  T++ +LT+   ++      QVH  I++        +  +L++ Y K G L  + +V
Sbjct: 241 CNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRV 300

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           F+ + ++  ++W+AML GY + G  +  V+++R +T E VKP+  T  +V++ C+
Sbjct: 301 FDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCS 354



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 134/240 (55%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++ D  P+RN V +  ++  Y +   H EAL LF+ + R G      TL++VL +C   
Sbjct: 96  RNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVH 155

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                  QVH   VK+ F   + V +SL+D+Y ++ N+++ R+VFD + E + VS T+++
Sbjct: 156 QSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAII 215

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+  ++D  L+LF ++   G++ N  TF+T+L  L+    +    QVH ++++    
Sbjct: 216 SGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELP 275

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + N+LI MY K   +  +R VFD M  R +I+WN+M+ GY  + +  E  + F  M
Sbjct: 276 FFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM 335



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 1/185 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ + +FD  P+R+ V    ++  Y +  L  EAL+LF  +   G+     T +++L + 
Sbjct: 194 QEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSL 253

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L    +G+QVH   ++      + +  SL+D+Y +   +   RRVFD+M + + +SW 
Sbjct: 254 SGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWN 313

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++L GY R+ +   V++LF R   E +KP+S T   VL   +  G+V   + +  +++K 
Sbjct: 314 AMLMGYGRHGIGQEVVQLF-RTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKE 372

Query: 209 GGEVV 213
              V+
Sbjct: 373 QNAVI 377


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/696 (34%), Positives = 392/696 (56%), Gaps = 59/696 (8%)

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
           + A Q+H  V+K     + ++ + L+S+Y    ++ D+  +F+ +    ++ W S++  Y
Sbjct: 23  SQAQQLHAQVLKFQASSLCNL-SLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCY 81

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
            ++ L  ++  +F  M  +G     + F SV+K CA   +L L   LH  +++ G+DFD 
Sbjct: 82  TSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDL 141

Query: 316 NIRTGLMVAYSKCGKMEDAS--------------------------------KIFSMMRE 343
                LM  YSK   +E++                                 KIF MM E
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----- 398
            KD+VSW  +I+G+ +NG  +  +    +M    ++P+ FT S +L   P ++       
Sbjct: 202 -KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVL---PLIAENVDISR 257

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             ++H   I+   +    V ++L++ Y K   + ++ +VF L+ E+D ++W++++AG  Q
Sbjct: 258 GKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQ 317

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G  +  ++ +RQ+    +KP  ++FSS++ AC A    +  GKQ H    +   +  + 
Sbjct: 318 NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPAC-AHLTTLHLGKQLHGYITRNGFDENIF 376

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           ++S+LV MY+K GNI +A ++F R R RD+VSW +MI G A HG    A+E+F++M  + 
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++ + + F+ V+TAC+H GLVDE  +YF+ M  +  I P +EHY+ + DL  RAG LE+A
Sbjct: 437 IKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 496

Query: 637 MDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAAT 682
            D I  M    + ++W T+L+AC              R++ + P+++  Y+LL+N+Y+A 
Sbjct: 497 YDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 556

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
             W+E A+ R  M    ++K    SWIEVKNK Y+F+AGD SHP   +I   +E L   +
Sbjct: 557 RRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELM 616

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           +  GY PDTS V  D+++E K+ ++  HSERLAI FG++ TPAG  +++ KNLRVC DCH
Sbjct: 617 EKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCH 676

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T  K ISK+  R+IVVRD +RFHHFK G CSCGDYW
Sbjct: 677 TATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 33/371 (8%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           Y    L  ++L  F+G+   GL    +   SVLK+C  L D   G  +H   ++ G   D
Sbjct: 81  YTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD 140

Query: 113 VNVSTSLVDLYMRTNNVEDG--------------------------------RRVFDDMN 140
           +    +L+++Y +   +E+                                 R++F+ M 
Sbjct: 141 LYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMP 200

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E ++VSW ++++G ARN + +  L +   M    +KP+SFT S+VL ++A+   ++   +
Sbjct: 201 EKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE 260

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H   I+ G +    V ++LI MY K   V D+  VF  + +RD I+WNS++AG V N L
Sbjct: 261 IHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGL 320

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             E    F  M +A  +    +F S++  CA    L L +QLH  + +NG D +  I + 
Sbjct: 321 FDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS 380

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG +  A +IF  MR ++D+VSWTAMI G   +G    A+  F QM  EG++P
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMR-LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKP 439

Query: 381 NGFTYSIILTA 391
           N   +  +LTA
Sbjct: 440 NHVAFMAVLTA 450



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 224/449 (49%), Gaps = 37/449 (8%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y   N + D  R+F+ ++    ++W S++  Y  + +  + L  F  M   G+ P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA-------- 233
           F +VL   A    +     +H  +I+ G +      NAL++MY K + + ++        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 234 ------------------------RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                                   R +F+ M ++D ++WN+++AG   N L+ E      
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            MG A  +    T  SV+ L A   ++   +++H   ++ G+D D  + + L+  Y+KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++ D+ ++F+++ E +D +SW ++I+G +QNG  D  + FF QM    ++P  +++S I+
Sbjct: 289 RVADSCRVFTLLTE-RDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   ++      Q+H +I +  ++++  + ++L++ Y K G +  A ++F+ +  +D+V
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AM+ G A  G    A++++ Q+ +EG+KPN   F +V+ AC+      E  K F++ 
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSM 467

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +    +   +   +A+  +  + G +E A
Sbjct: 468 TRDFGIAPGVEHYAAVSDLLGRAGRLEEA 496



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 166/339 (48%), Gaps = 7/339 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG---LPLFGSTLSSVLKTC 88
           + +F+  P+++ V +N ++    R+ L++E L +   IR +G   L     TLSSVL   
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM---IREMGGANLKPDSFTLSSVLPLI 249

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   G+++H   ++ G   D+ V++SL+D+Y +   V D  RVF  + E + +SW 
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S+++G  +N + D  L  F +M +  IKP S++FS+++   A    +    Q+H  + +N
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN 369

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +    + ++L+ MY K   +R A+ +FD M  RD ++W +M+ G   +    +A E F
Sbjct: 370 GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELF 429

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSK 327
             M   G +     F++V+  C+    +  A +  + + ++ GI         +     +
Sbjct: 430 EQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGR 489

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            G++E+A      M        W  ++S    +  ID+A
Sbjct: 490 AGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMA 528


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 277/818 (33%), Positives = 431/818 (52%), Gaps = 96/818 (11%)

Query: 75  PLFGSTLS-SVLKTC--GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN--NV 129
           P F  T++ S+L+T    C     F R +  + + +GF  D   ++ L+     +    +
Sbjct: 33  PTFKPTITLSILETHLHNCHNLKQFNR-ILSQMILTGFISDTFAASRLLKFSTDSPFIGL 91

Query: 130 EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL 189
           +   ++FD +  SN   W +++  Y ++   ++ L L+  M    + P+++T+  V+   
Sbjct: 92  DYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQAC 151

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
           A   +     ++H  V+K G +    V N LI+MY     +RDAR +FD     DS++WN
Sbjct: 152 AVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWN 211

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           S++AGYV      EA   F+ M        R+   S                        
Sbjct: 212 SILAGYVKKGDVEEAKLIFDQMP------QRNIVAS------------------------ 241

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
                      ++V   K G++ +A K+F+ M E KD+VSW+A+ISG+ QNG  + A+  
Sbjct: 242 ---------NSMIVLLGKMGQVMEAWKLFNEMDE-KDMVSWSALISGYEQNGMYEEALVM 291

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAY-- 423
           F +M   G+R +      +L+A   +S  +    +H  +I+   E   ++  AL++ Y  
Sbjct: 292 FIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSG 351

Query: 424 -----------------------------VKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
                                        +K G +++A  +F+++ EKDIV+WSA+++GY
Sbjct: 352 SGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGY 411

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           AQ       + ++ ++    ++P+E    SVI+ACT   AA++QGK  HA   K  L   
Sbjct: 412 AQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHL-AALDQGKWVHAYIRKNGLKVN 470

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + + + L+ MY K G +E+A EVF    ++ + SWN++I G A +G  +++L++F EM+ 
Sbjct: 471 VILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKN 530

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  + ITF+GV+ AC H GLVDEG+ +F  M+ +H I P ++HY CMVDL  RAG+L 
Sbjct: 531 NGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLN 590

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A  +I  MP A     W  +L AC+              LI LQP     +VLLSN++A
Sbjct: 591 EAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFA 650

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           + G W++   VR +M  + V K  G S IE     + FLAGD +HP  N++   L E++ 
Sbjct: 651 SKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAK 710

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           RLK  GY PDT+ V  DID+E KE  L +HSE+LAIAFGL+      P++I+KNLR+C D
Sbjct: 711 RLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICND 770

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CHT  KLISK   R+IVVRD +RFH+FKEG CSC DYW
Sbjct: 771 CHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/600 (24%), Positives = 275/600 (45%), Gaps = 81/600 (13%)

Query: 21  SLRSPFYSKKDQSL--FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFG 78
           S  SPF    D SL  FDR    N   +N ++  Y + +  ++AL L+  + +  +    
Sbjct: 83  STDSPFIGL-DYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDN 141

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
            T   V++ C        G+++H   +K GF  DV V  +L+++Y    N+ D R++FD+
Sbjct: 142 YTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDE 201

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
               + VSW S+L+GY +    +    +F +M                       IVA+ 
Sbjct: 202 SPVLDSVSWNSILAGYVKKGDVEEAKLIFDQM-------------------PQRNIVAS- 241

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
                              N++I +  K   V +A  +F+ M+++D ++W+++++GY  N
Sbjct: 242 -------------------NSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQN 282

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            ++ EA   F  M   G  L     VSV+  CA    ++  + +H  V++ GI+   N++
Sbjct: 283 GMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQ 342

Query: 319 TGLMVAYS-------------------------------KCGKMEDASKIFSMMREMKDV 347
             L+  YS                               KCG +E A  +F +M E KD+
Sbjct: 343 NALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPE-KDI 401

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAH 403
           VSW+A+ISG+ Q+      +  F +M    +RP+      +++A   ++       VHA+
Sbjct: 402 VSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAY 461

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I K   + +  +GT LL+ Y+K G ++ A +VF  ++EK + +W+A++ G A  G  E +
Sbjct: 462 IRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERS 521

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI-KAKLNNALCVSSALV 522
           + ++ ++ + GV PNE TF  V+ AC      V++G+   A  I K  +   +     +V
Sbjct: 522 LDMFSEMKNNGVIPNEITFMGVLGACRH-MGLVDEGRCHFASMIEKHGIEPNVKHYGCMV 580

Query: 523 TMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
            +  + G +  A ++ +      D+ +W +++    +HG T+    V +++     + DG
Sbjct: 581 DLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDG 640


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/635 (37%), Positives = 365/635 (57%), Gaps = 58/635 (9%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N  I+ ++++  +  AR VF+ M  R ++TWN+M++GY                      
Sbjct: 77  NKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYT--------------------- 115

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                     K+    KE   A +L  ++ +      +NI   ++V Y +   ++ A   
Sbjct: 116 ----------KVAGKVKE---AHELFDKIPEPD-SVSYNI---MLVCYLRSYGVKAALAF 158

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ M  +KD+ SW  +ISG  QNG +  A + F  M  +    NG ++S +++       
Sbjct: 159 FNKM-PVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----NGVSWSAMISGYVEHGD 213

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            +    + K    KS  V TA+L  Y+K G ++ A ++F+ +  K++V W++M+AGY + 
Sbjct: 214 LEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVEN 273

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
              E  +K+++ +    V+PN  + SSV+  C+  SA +  G+Q H    K+ L+     
Sbjct: 274 CRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSA-LPLGRQMHQLVSKSPLSKDTTA 332

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            ++L++MY K G+++SA ++F    ++D+++WN+MI GYAQHG  +KAL +F +MR   +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTM 392

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D ITF+ VI AC HAG VD G QYF  M  E  I     HY+C++DL  RAG L++A+
Sbjct: 393 KPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAV 452

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
            +I  MPF   A ++ T+L ACR              L++L P  +  YV L+N+YAAT 
Sbjct: 453 SLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATN 512

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W + A+VRK+M +  V K  GYSWIE+K+ T+ F + D  HP+   I+ KL EL  ++K
Sbjct: 513 KWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMK 572

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
            AGY PD  + L D+++EHKE +L  HSE+LAIAFGL+ T  G P+++ KNLRVCGDCH 
Sbjct: 573 LAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHR 632

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IK IS +E+R+I+VRDT RFHHF+ G CSCGDYW
Sbjct: 633 AIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 211/439 (48%), Gaps = 61/439 (13%)

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
           A DV      +  ++R  ++E  R VF+ M+    V+W ++LSGY   K+  +V E  H 
Sbjct: 70  ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGY--TKVAGKVKEA-HE 126

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           +  +  +P+S +++ +L                             VC      YL+S  
Sbjct: 127 LFDKIPEPDSVSYNIML-----------------------------VC------YLRSYG 151

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           V+ A A F+ M  +D  +WN++++G+  N    +AF+ F+ M     E    ++ ++I  
Sbjct: 152 VKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM----PEKNGVSWSAMISG 207

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
                +L  A +L+  V    +     + T ++  Y K GK+E A +IF  M  +K++V+
Sbjct: 208 YVEHGDLEAAEELYKNVGMKSV----VVETAMLTGYMKFGKVELAERIFQRM-AVKNLVT 262

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           W +MI+G+++N   +  +  F  M    VRPN  + S +L     +S      Q+H  + 
Sbjct: 263 WNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVS 322

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K+   K  +  T+L++ Y K G LD A K+F  +  KD++ W+AM++GYAQ G    A+ 
Sbjct: 323 KSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALH 382

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSA 520
           ++ ++ +  +KP+  TF +VI AC   +  V+ G Q+         I+AK  +  CV   
Sbjct: 383 LFDKMRNGTMKPDWITFVAVILACNH-AGFVDLGVQYFKSMKKEFGIEAKPVHYTCV--- 438

Query: 521 LVTMYSKKGNIESASEVFK 539
            + +  + G ++ A  + K
Sbjct: 439 -IDLLGRAGRLDEAVSLIK 456



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 169/354 (47%), Gaps = 25/354 (7%)

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           Y+R+  V+     F+ M   ++ SW +L+SG+A+N    +  +LF  M     + N  ++
Sbjct: 146 YLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMP----EKNGVSW 201

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           S ++    + G +  A +++    KN G     V  A+++ Y+K   V  A  +F  M  
Sbjct: 202 SAMISGYVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAV 257

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           ++ +TWNSM+AGYV N    +  + F  M  +       +  SV+  C+    L L RQ+
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQM 317

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H  V K+ +  D    T L+  Y KCG ++ A K+F  M   KDV++W AMISG+ Q+GA
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPR-KDVITWNAMISGYAQHGA 376

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG------ 416
              A++ F +M    ++P+  T+  ++ A        +     K+  +K F +       
Sbjct: 377 GRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKS-MKKEFGIEAKPVHY 435

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           T +++   + G LDEA     LI E      +A+       G   GA +I++ L
Sbjct: 436 TCVIDLLGRAGRLDEAV---SLIKEMPFTPHAAIY------GTLLGACRIHKNL 480



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 13/324 (4%)

Query: 22  LRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           LRS +  K   + F++ P ++   +N L+  + ++   Q+A +LF  +       + + +
Sbjct: 147 LRS-YGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMI 205

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           S  ++  G L       +   E  K+   + V V T+++  YM+   VE   R+F  M  
Sbjct: 206 SGYVEH-GDL-------EAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAV 257

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            N+V+W S+++GY  N   +  L++F  M    ++PN  + S+VL   ++   +    Q+
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQM 317

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H +V K+     T+ C +LISMY K   +  A  +F  M  +D ITWN+M++GY  +   
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAG 377

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTG 320
            +A   F+ M     +    TFV+VI  C     + L  Q    + K  GI+      T 
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTC 437

Query: 321 LMVAYSKCGKMEDASKIFSMMREM 344
           ++    + G++++A    S+++EM
Sbjct: 438 VIDLLGRAGRLDEA---VSLIKEM 458


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/571 (40%), Positives = 357/571 (62%), Gaps = 25/571 (4%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKMEDASKI 337
           R  + +++K C   K L   R +H+ +L++   F H+I  G  L+  Y+KCG +E+A K+
Sbjct: 60  RRFYNTLLKKCTVFKLLIQGRIVHAHILQS--IFRHDIVMGNTLLNMYAKCGSLEEARKV 117

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA--- 394
           F  M + +D V+WT +ISG+ Q+     A+ FF QM R G  PN FT S ++ A  A   
Sbjct: 118 FEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176

Query: 395 -VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                Q+H   +K  ++ +  VG+ALL+ Y + G++D+A  VF+ ++ ++ V+W+A++AG
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +A+   TE A+++++ +  +G +P+ F+++S+  AC++ +  +EQGK  HA  IK+    
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS-TGFLEQGKWVHAYMIKSGEKL 295

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
                + L+ MY+K G+I  A ++F R  KRD+VSWNS++  YAQHG  K+A+  F+EMR
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           R  +  + I+F+ V+TAC+H+GL+DEG  Y+++M  +  I P   HY  +VDL  RAG L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHYVTVVDLLGRAGDL 414

Query: 634 EKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMY 679
            +A+  I  MP   +A +W+ +L ACR+                L P D   +V+L N+Y
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A+ G W + ARVRK M +  VKKE   SW+E++N  + F+A D  HPQ  +I  K EE+ 
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            ++K+ GY PDTS+V+  +D + +E  L  HSE++A+AF L+ TP G+ + I KN+RVCG
Sbjct: 535 AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCG 594

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           DCHT IKL SK+  R+I+VRDTNRFHHFK+ 
Sbjct: 595 DCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 209/414 (50%), Gaps = 43/414 (10%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +++LK C      + GR VH   ++S F  D+ +  +L+++Y +  ++E+ R+VF+ M +
Sbjct: 64  NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            + V+WT+L+SGY+++      L  F++M   G  PN FT S+V+   A E       Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +K G +    V +AL+ +Y +  ++ DA+ VFD +E R+ ++WN+++AG+      
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +A E F  M   G   +  ++ S+   C++T  L   + +H+ ++K+G          L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+K G + DA KIF  + + +DVVSW ++++ + Q+G    AV +F +M R G+RPN
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362

Query: 382 GFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             ++  +LTA                                   G+LDE    +EL+ +
Sbjct: 363 EISFLSVLTACS-------------------------------HSGLLDEGWHYYELMKK 391

Query: 442 KDIV--AWSAM----LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             IV  AW  +    L G A  GD   A++   ++    ++P    + +++NAC
Sbjct: 392 DGIVPEAWHYVTVVDLLGRA--GDLNRALRFIEEMP---IEPTAAIWKALLNAC 440



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 164/325 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F++ PQR+FV +  L+  Y +     +AL  F  + R G      TLSSV+K     
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H  CVK GF  +V+V ++L+DLY R   ++D + VFD +   N VSW +L+
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    ++ LELF  M  +G +P+ F+++++ G  +  G +     VH  +IK+G +
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +V    N L+ MY KS  + DAR +FD +  RD ++WNS++  Y  +    EA   F  M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G      +F+SV+  C+ +  L      +  + K+GI  +      ++    + G +
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414

Query: 332 EDASKIFSMMREMKDVVSWTAMISG 356
             A +    M        W A+++ 
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNA 439


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/645 (36%), Positives = 381/645 (59%), Gaps = 26/645 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LI MY K   +  A  VFD M  R+ ++W +++ G++ N   +E+   F+ MGL+G +
Sbjct: 11  NDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVK 70

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               TF + +K C     L + RQ+H   +K G D  + +   ++  YSKCG++ +A+ +
Sbjct: 71  PNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACM 130

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F +M  +++++SW AMI+G+   G  + A+  F +M   G   + FT++  L A   +  
Sbjct: 131 FEVM-PVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGA 189

Query: 398 F----QVHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                Q+HA +I     Y  + +V  AL++ YVK G L  A +VF  I+EK +++W+A++
Sbjct: 190 IKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALI 249

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            GYAQ G+   +++++RQL    ++ + F  SS++    A  A V+QGKQ HA +IK   
Sbjct: 250 LGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGV-FADFALVQQGKQMHAFAIKVPS 308

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
              + V ++++ MY K G I  A  +F     R+++SW  MI GY +HG  K+A+ +F E
Sbjct: 309 GVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDE 368

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M+    E D +T++ V+  C+H+GLV++GQ+YF  + + H I   +EHY+CMVDL  RAG
Sbjct: 369 MQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAG 428

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
            L++A ++++ MP  A+  +W+T+L+ACR              L+ L   +   YV++SN
Sbjct: 429 RLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSN 488

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA  G+W+E  R+R+L+  +K+KKEAG SW+E+  + + F  GD +HP + +I+  L+E
Sbjct: 489 IYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKE 548

Query: 738 LSTRLKDA-GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA---TPAGAPLQIVK 793
           +  R+K+  GY     Y L D+++E K   L  HSE+LAI   LV          +++ K
Sbjct: 549 MERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFK 608

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVCGDCH  IK +SK+ R   VVRD NRFH F++GLCSC DYW
Sbjct: 609 NLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 254/483 (52%), Gaps = 18/483 (3%)

Query: 108 GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELF 167
           GF  D+ +S  L+ +Y +   +     VFD M + NVVSWT+L+ G+ +N      L LF
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 168 HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
            +M + G+KPN FTFST L        +    Q+H + +K G ++V  V N++I MY K 
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
             + +A  +F+ M  R+ I+WN+M+AGY       +A   F  M   G  L   TF S +
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           K C+    ++   Q+H+ ++  G  +  N  +   L+  Y KCGK+  A ++FS + E K
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE-K 240

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVH 401
            V+SWTA+I G+ Q G +  ++  F Q+    ++ +GF  S ++      +      Q+H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           A  IK       SV  ++L+ Y+K G+++EA ++F  +  +++++W+ M+ GY + G  +
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA--CS---IKAKLNNALC 516
            A++++ ++  +  +P++ T+ +V+  C+  S  VE+G+++ +  CS   IKA++ +  C
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCS-HSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419

Query: 517 VSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
               +V +  + G ++ A  +      + ++  W +++     HG  +   EV   + R 
Sbjct: 420 ----MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRL 475

Query: 576 DLE 578
           D E
Sbjct: 476 DSE 478



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 186/358 (51%), Gaps = 3/358 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR  +RN V +  L+  + ++    E+L LF  +   G+     T S+ LK CG L  
Sbjct: 29  VFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNG 88

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GRQ+H  CVK+GF     V  S++D+Y +   + +   +F+ M   N++SW ++++G
Sbjct: 89  LDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAG 148

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG--E 211
           Y      ++ L LF +MQ  G   + FTF++ L   +D G +    Q+H  +I  G    
Sbjct: 149 YTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYS 208

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           V T+V  ALI +Y+K   +  AR VF  +E++  I+W +++ GY       E+ E F  +
Sbjct: 209 VNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQL 268

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +  ++      S++ + A    ++  +Q+H+  +K     D ++   ++  Y KCG +
Sbjct: 269 RESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMI 328

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +A ++FS M   ++V+SWT MI+G+ ++G    A+  F +M  +   P+  TY  +L
Sbjct: 329 NEAERLFSEM-PARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVL 385



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 172/336 (51%), Gaps = 3/336 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P RN + +N ++  Y      ++AL LF  ++ +G  L   T +S LK C  L  
Sbjct: 130 MFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGA 189

Query: 94  HVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              G Q+H   +  GF   VN  V+ +L+DLY++   +   RRVF  + E +V+SWT+L+
Sbjct: 190 IKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALI 249

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GYA+       +ELF +++   I+ + F  S+++GV AD  +V    Q+H   IK    
Sbjct: 250 LGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSG 309

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           V  SVCN+++ MYLK  M+ +A  +F  M  R+ I+W  M+ GY  + L  EA   F+ M
Sbjct: 310 VDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEM 369

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGK 330
            L   E    T+++V+  C+ +  +   ++  S++   +GI         ++    + G+
Sbjct: 370 QLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGR 429

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +++A  +   M    +V  W  ++S    +G ++L 
Sbjct: 430 LKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELG 465



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 2/144 (1%)

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L +S+ L+ MY K G +  A +VF R  KR++VSW +++CG+ Q+G+  ++L +F +M  
Sbjct: 7   LMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGL 66

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             ++ +  TF   + AC     +D G+Q  DI V        +   S ++D+YS+ G + 
Sbjct: 67  SGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNS-IIDMYSKCGRIN 125

Query: 635 KAMDIINRMPFAASATVWRTVLAA 658
           +A  +   MP   +   W  ++A 
Sbjct: 126 EAACMFEVMP-VRNLISWNAMIAG 148


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/666 (36%), Positives = 377/666 (56%), Gaps = 53/666 (7%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           +I+ +L+++ + +AR VFD +   D   +  M+ GY  N     A + F  M +      
Sbjct: 1   MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV--- 57

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQV----------------------LKNGIDFDHNI 317
             ++ S+IK C    +L +AR+L  ++                      +  G+ +    
Sbjct: 58  -VSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPF 116

Query: 318 R-----TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
           R       ++  Y   G++ED  ++F  M   ++V+SWT+MI G  Q+G  + A+  F Q
Sbjct: 117 RDIAAWNSMIYGYCCNGRVEDGLRLFQEM-PCRNVISWTSMIGGLDQHGRSEEALGLFRQ 175

Query: 373 MTREGV--RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
           M   GV  +P   TY  ++TA    S      Q+HAH+ K  Y     +  AL+  Y   
Sbjct: 176 MMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANC 235

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
             ++++ +VF      ++V W+A++ GY      E A+K++ ++  EGV PN+ +F+S +
Sbjct: 236 KQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSAL 295

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           N+C    A ++ G++ H  ++K  L   + V ++L+ MY + GN+     +FKR  K+++
Sbjct: 296 NSCCGLEA-LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNI 354

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           VSWNS+I G AQHG    AL  F +M R  +E D ITF G+++AC+H+G+  +G+  F  
Sbjct: 355 VSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKY 414

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----- 661
                     ++HY+CMVD+  R+G LE+A ++I  MP  A++ VW  +L+AC +     
Sbjct: 415 FSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLE 474

Query: 662 ---------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                    I L+PH S+ YVLLSN+YA+   W + +R+R+ M  R + K+ G SWI +K
Sbjct: 475 VAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIK 534

Query: 713 NKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSE 772
                FL+GD SHP S++IY KLE L  +LK+ GY PD  + L D++DE KE +LS HSE
Sbjct: 535 GWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSE 594

Query: 773 RLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLC 832
           RLAI FGL++T  G+ + ++KNLRVCGDCH+ IKLI+K+ RR I+VRD+ RFHHF +G C
Sbjct: 595 RLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRC 654

Query: 833 SCGDYW 838
           SCGDYW
Sbjct: 655 SCGDYW 660



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 221/453 (48%), Gaps = 44/453 (9%)

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFT 181
           ++R   +++ R VFD ++  +V  +T +++GYARN   D  L+LF+ M V+  +  NS  
Sbjct: 5   HLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMI 64

Query: 182 FS-------TVLGVLADEGIVATAVQVHTMVIKNG----GEVVT-------------SVC 217
                    T+   L DE    + V   TM+  NG    G++               +  
Sbjct: 65  KGCFDCADLTMARKLFDEMPERSVVSWTTMI--NGFLQFGKIEVAEGLFYKMPFRDIAAW 122

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N++I  Y  +  V D   +F  M  R+ I+W SM+ G   +    EA   F  M   G E
Sbjct: 123 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182

Query: 278 L--TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           +  T ST+  VI  CA    L    Q+H+ V K G  FD  I   L+  Y+ C +MED+ 
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F     M +VV WTA+++G+  N   + A+  F +M REGV PN  +++  L +   +
Sbjct: 243 RVFHGKLHM-NVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGL 301

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                  ++H   +K   E    VG +L+  Y + G L++   +F+ I +K+IV+W++++
Sbjct: 302 EALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVI 361

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----S 506
            G AQ G    A+  + Q+    V+P+E TF+ +++AC+  S   ++G+          S
Sbjct: 362 VGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACS-HSGMSQKGRCLFKYFSENKS 420

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
            + KL++  C    +V +  + G +E A E+ +
Sbjct: 421 AEVKLDHYAC----MVDILGRSGKLEEAEELIR 449



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 147/283 (51%), Gaps = 3/283 (1%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RD+    S++  Y     VEDG R+F +M   NV+SWTS++ G  ++  ++  L LF +M
Sbjct: 117 RDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQM 176

Query: 171 QVEGI--KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
              G+  KP S T+  V+   A+   +   VQ+H  V K G      +  ALI+ Y   K
Sbjct: 177 MGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK 236

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            + D+  VF G    + + W ++V GY  N  H +A + F  M   G    +S+F S + 
Sbjct: 237 QMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALN 296

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C   + L   R++H+  +K G++ D  +   L+V Y +CG + D   IF  + + K++V
Sbjct: 297 SCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISK-KNIV 355

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           SW ++I G  Q+G    A+ FF QM R  V P+  T++ +L+A
Sbjct: 356 SWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSA 398



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 7/338 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL--FGSTLSSVLKTCGCL 91
           LF   P RN + +  ++    +    +EAL LF  +   G+ +    ST   V+  C   
Sbjct: 141 LFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANA 200

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H    K G++ D  +S +L+  Y     +ED  RVF      NVV WT+L+
Sbjct: 201 SALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALV 260

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY  N  ++  L++F  M  EG+ PN  +F++ L        +    ++HT  +K G E
Sbjct: 261 TGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLE 320

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V N+LI MY +   + D   +F  +  ++ ++WNS++ G   +   M A   FN M
Sbjct: 321 TDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQM 380

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG---IDFDHNIRTGLMVAYSKC 328
             +  E    TF  ++  C+ +   +  R L     +N    +  DH     ++    + 
Sbjct: 381 VRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDH--YACMVDILGRS 438

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           GK+E+A ++   M    + + W  ++S    +  +++A
Sbjct: 439 GKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVA 476


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/688 (35%), Positives = 377/688 (54%), Gaps = 20/688 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K+C  L     GR VH      G   D+ V ++L+ +Y     + D R+VFD M
Sbjct: 148 TFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGM 207

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E + V W  ++ GY +       +ELF  M+  G +PN  T +  L V A E  +   V
Sbjct: 208 AERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGV 267

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+HT+ +K G E   +V N L+SMY K K + D   +F  M   D +TWN M++G V N 
Sbjct: 268 QLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNG 327

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A   F +M  +G      T VS++            ++LH  +++N +  D  + +
Sbjct: 328 FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC  +  A  ++   + + DVV  + MISG++ NG    AV  F  +  +G+R
Sbjct: 388 ALVDIYFKCRAVRMAQSVYDSSKAI-DVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIR 446

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN    + +L A  +++      ++H++ +K  YE    V +AL++ Y K G LD +  +
Sbjct: 447 PNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYI 506

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  I  KD V W++M++ +AQ G+ E A+ ++R++  EGVK +  T SSV++AC A   A
Sbjct: 507 FSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSAC-ASLPA 565

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H   IK  +   L   SAL+ MY K GN+E A  VF+   +++ VSWNS+I  
Sbjct: 566 IYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIAS 625

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  +G  K+++ + + M+ +  + D +TF+ +++AC HAG V EG + F  M  E+ I P
Sbjct: 626 YGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAP 685

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            MEH++CMVDLYSRAG L+KAM++I  MPF   A +W  +L ACR              L
Sbjct: 686 RMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQEL 745

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L PH+S  YVL+SN+ A  G W   ++VR+LM D KV+K  GYSW++V N ++ F+A 
Sbjct: 746 FKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAA 805

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKP 749
           D SHP S  IY  L+ +   L++ GY P
Sbjct: 806 DKSHPDSEDIYMSLKSILLELREEGYIP 833



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 187/642 (29%), Positives = 316/642 (49%), Gaps = 29/642 (4%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           L +VL+ C        G QVH   V +G  A D  + T LV +Y+      D   VF  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 140 NE---SNVVSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGI 194
                +  + W  L+ G          L  + +M        P+S TF  V+   A  G 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +A    VH      G +    V +ALI MY    ++ DAR VFDGM +RD + WN M+ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           YV       A E F +M  +G E   +T    + + AT  +L    QLH+  +K G++ +
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             +   L+  Y+KC  ++D  K+F +M    D+V+W  MISG +QNG +D A+  FC M 
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPR-DDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           + G+RP+  T   +L A   ++ F    ++H +I++        + +AL++ Y K   + 
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            A  V++     D+V  S M++GY   G ++ AVK++R L  +G++PN    +SV+ AC 
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC- 459

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A  AA++ G++ H+ ++K        V SAL+ MY+K G ++ +  +F +   +D V+WN
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWN 519

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           SMI  +AQ+G  ++AL +F+EM  + +++  +T   V++AC     +  G++   +++ +
Sbjct: 520 SMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVI-K 578

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC-------RLIS 663
             I   +   S ++D+Y + G LE A  +   MP   +   W +++A+          +S
Sbjct: 579 GPIRADLFAESALIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIASYGAYGLVKESVS 637

Query: 664 LQPH--------DSAIYVLLSNMYAATGHWQERARVRKLMND 697
           L  H        D   ++ L +  A  G  QE  R+ + M +
Sbjct: 638 LLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTE 679



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 287/555 (51%), Gaps = 16/555 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ V +N ++  Y +      A+ LF  +R  G     +TL+  L      
Sbjct: 201 RQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATE 260

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  FG Q+H   VK G   +V V+ +LV +Y +   ++DG ++F  M   ++V+W  ++
Sbjct: 261 SDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMI 320

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG  +N   D+ L LF  MQ  GI+P+S T  ++L  L D        ++H  +++N   
Sbjct: 321 SGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVH 380

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   + +AL+ +Y K + VR A++V+D  +  D +  ++M++GYV N +  EA + F  +
Sbjct: 381 MDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYL 440

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G         SV+  CA+   ++L ++LHS  LKN  +    + + LM  Y+KCG++
Sbjct: 441 LEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRL 500

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + +  IFS +   KD V+W +MIS   QNG  + A+N F +M  EGV+ +  T S +L+A
Sbjct: 501 DLSHYIFSKI-SAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSA 559

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             ++       ++H  +IK          +AL++ Y K G L+ A +VFE + EK+ V+W
Sbjct: 560 CASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSW 619

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-- 505
           ++++A Y   G  + +V + R +  EG K +  TF ++++AC A +  V++G +   C  
Sbjct: 620 NSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSAC-AHAGQVQEGLRLFRCMT 678

Query: 506 ---SIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGH 561
               I  ++ +  C    +V +YS+ G ++ A E +     K D   W +++     H +
Sbjct: 679 EEYQIAPRMEHFAC----MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRN 734

Query: 562 TKKALEVFKEMRRQD 576
            + A    +E+ + D
Sbjct: 735 VELAEIASQELFKLD 749


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/740 (34%), Positives = 396/740 (53%), Gaps = 94/740 (12%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           LV  Y    ++++GRRVFD M + NV  W  ++S YA                    K  
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA--------------------KIG 41

Query: 179 SFTFSTVL-GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
            F  S  L  ++ ++GI                               + K    A  +F
Sbjct: 42  DFKESICLFKIMVEKGI-------------------------------EGKRSESASELF 70

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           D + DRD I+WNSM++GYV+N L       +  M   G ++  +T +SV+  CA +  L 
Sbjct: 71  DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLS 130

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L + +HS  +K+  +   N    L+  YSKCG ++ A ++F  M E ++VVSWT+MI+G+
Sbjct: 131 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGY 189

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSF 413
            ++G  D A+    QM +EGV+ +    + IL A            VH +I   N   + 
Sbjct: 190 TRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL 249

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            V  AL++ Y K G ++ A  VF  +  KDI++W+ M      +G+              
Sbjct: 250 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM------VGE-------------- 289

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            +KP+  T + ++ AC + SA +E+GK+ H   ++   ++   V++ALV +Y K G +  
Sbjct: 290 -LKPDSRTMACILPACASLSA-LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL 347

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A  +F     +DLVSW  MI GY  HG+  +A+  F EMR   +E D ++FI ++ AC+H
Sbjct: 348 ARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSH 407

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
           +GL+++G ++F IM N+ +I P +EHY+CMVDL SR G L KA   I  +P A  AT+W 
Sbjct: 408 SGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWG 467

Query: 654 TVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
            +L  CR+                L+P ++  YVLL+N+YA    W+E  R+R+ +  + 
Sbjct: 468 ALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKG 527

Query: 700 VKKEAGYSWIEVKNKTYSFLAG-DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
           ++K  G SWIE+K +   F++G + SHP S +I S L+++  ++K+ GY P T Y L + 
Sbjct: 528 LRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINA 587

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           D+  KE  L  HSE+LA+AFGL+  P    +++ KNLRVCGDCH + K +SK  RR+IV+
Sbjct: 588 DEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVL 647

Query: 819 RDTNRFHHFKEGLCSCGDYW 838
           RD+NRFHHFK+G CSC  +W
Sbjct: 648 RDSNRFHHFKDGYCSCRGFW 667



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 240/498 (48%), Gaps = 50/498 (10%)

Query: 81  LSSVLKTCGCL------FDHVFGRQVH------CECVKSG-FARDVNVSTSLVDLYMRTN 127
           L S   TCG L      FD +  + V+       E  K G F   + +   +V+  +   
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
             E    +FD + + +V+SW S++SGY  N + +R L ++ +M   GI  +  T  +VL 
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
             A  G ++    VH++ IK+  E   +  N L+ MY K   +  A  VF+ M +R+ ++
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           W SM+AGY  +     A      M   G +L      S++  CA +  L   + +H  + 
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
            N +  +  +   LM  Y+KCG ME A+ +FS M  +KD++SW  M+ G L         
Sbjct: 242 ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMV-VKDIISWNTMV-GEL--------- 290

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
                      +P+  T + IL A  ++S      ++H +I++  Y     V  AL++ Y
Sbjct: 291 -----------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLY 339

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
           VK G+L  A  +F++I  KD+V+W+ M+AGY   G    A+  + ++   G++P+E +F 
Sbjct: 340 VKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFI 399

Query: 484 SVINACTAPSAAVEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           S++ AC+  S  +EQG +F     +  +I+ KL +  C    +V + S+ GN+  A +  
Sbjct: 400 SILYACS-HSGLLEQGWRFFYIMKNDFNIEPKLEHYAC----MVDLLSRTGNLSKAYKFI 454

Query: 539 KRQR-KRDLVSWNSMICG 555
           +      D   W +++CG
Sbjct: 455 ETLPIAPDATIWGALLCG 472



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 253/555 (45%), Gaps = 54/555 (9%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S+    LFD+   R+ + +N ++  Y  + L +  L ++  +  LG+ +  +T+ SVL  
Sbjct: 63  SESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVG 122

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C        G+ VH   +KS F R +N S +L+D+Y +  +++   RVF+ M E NVVSW
Sbjct: 123 CAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 182

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           TS+++GY R+  +D  + L  +M+ EG+K +    +++L   A  G +     VH  +  
Sbjct: 183 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 242

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           N       VCNAL+ MY K   +  A +VF  M  +D I+WN+MV      EL  ++   
Sbjct: 243 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG-----ELKPDS--- 294

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
                         T   ++  CA+   L   +++H  +L+NG   D ++   L+  Y K
Sbjct: 295 -------------RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 341

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +  A  +F M+   KD+VSWT MI+G+  +G  + A+  F +M   G+ P+  ++  
Sbjct: 342 CGVLGLARLLFDMIPS-KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 400

Query: 388 ILTAQPAVSPFQV---HAHIIKT--NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-E 441
           IL A       +      +I+K   N E        +++   + G L +A K  E +   
Sbjct: 401 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIA 460

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            D   W A+L G     D E A K+  ++    ++P    +  ++    A +   E+ K+
Sbjct: 461 PDATIWGALLCGCRIYHDIELAEKVAERVFE--LEPENTGYYVLLANIYAEAEKWEEVKR 518

Query: 502 FHACSIKAKL-NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
                 K  L  N  C                  S +  + R    VS N+     + H 
Sbjct: 519 MREKIGKKGLRKNPGC------------------SWIEIKGRVNLFVSGNN-----SSHP 555

Query: 561 HTKKALEVFKEMRRQ 575
           H+KK   + K+MRR+
Sbjct: 556 HSKKIESLLKKMRRK 570


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/690 (34%), Positives = 385/690 (55%), Gaps = 53/690 (7%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVT 257
           QVH   IK G      + N +++     +    + AR +FD + + +   WN+M+ GY  
Sbjct: 57  QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSR 116

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
            +        +  M   G +  R TF  + K       L   RQLH  VLK+G+ ++  +
Sbjct: 117 LDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFV 176

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            T L+  Y  CG+++ A  +F +  +  DV++W  +IS + + G  + +   F  M  + 
Sbjct: 177 HTALVQMYLLCGQLDTARGVFDVCPK-ADVITWNMIISAYNKVGKFEESRRLFLVMEDKQ 235

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           V P   T  ++L+A   +       +VH+++     E +  +  A+++ Y   G +D A 
Sbjct: 236 VLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSAL 295

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTE-------------------------------G 462
            +F  ++ +DI++W+ +++G+  +G+ +                                
Sbjct: 296 GIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKE 355

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A++++R + +  VKP+EFT  SV+ AC A   A+E G+       + K+ N L V +AL+
Sbjct: 356 ALELFRNMQATNVKPDEFTMVSVLTAC-AHLGALELGEWIRTYIDRNKIKNDLFVRNALI 414

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY K G+++ A  +F+   +RD  +W +MI G A +GH +KAL++F  M +  +  D I
Sbjct: 415 DMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEI 474

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           T+IGV++ACTH GLVD+G++YF  M ++H I P + HY C+VDL +RAG L++A ++I  
Sbjct: 475 TYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIEN 534

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MP  A++ VW  +LA CR              ++ L+P + A+YVLL N+YAA   W + 
Sbjct: 535 MPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDL 594

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
             +R++M D+ +KK  G S IE+  + + F+AGD SHPQ+  I +KL++++  LK AGY 
Sbjct: 595 RELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYS 654

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
           PD S V  DI +E KE  + +HSE+LAIAFGL+ +P G  ++I KNLR+C DCH + KL+
Sbjct: 655 PDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLV 714

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           SK+  R+++VRD  RFHHFK GLCSC DYW
Sbjct: 715 SKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 246/531 (46%), Gaps = 44/531 (8%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFD 137
           L S+L+TC  + D +  +QVHC+ +K G   +  V  + V  +  T+   D    RR+FD
Sbjct: 42  LISLLETCESM-DQL--QQVHCQAIKKGLNAN-PVLQNRVMTFCCTHEYGDFQYARRLFD 97

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
           ++ E N+  W +++ GY+R       + L+  M   G+KP+ +TF  +      +  +  
Sbjct: 98  EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 157

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             Q+H  V+K+G +    V  AL+ MYL    +  AR VFD     D ITWN +++ Y  
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 217

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                E+   F  M       T  T V V+  C+  K+LR  +++HS V    ++ +  +
Sbjct: 218 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 277

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE- 376
              ++  Y+ CG+M+ A  IF  M   +D++SWT ++SG    G ID+A N+F +M  + 
Sbjct: 278 ENAMIDMYADCGEMDSALGIFRSMNN-RDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 336

Query: 377 ------------------------------GVRPNGFTYSIILTAQPAVSPFQ----VHA 402
                                          V+P+ FT   +LTA   +   +    +  
Sbjct: 337 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRT 396

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           +I +   +    V  AL++ Y K G +D+A  +F  + ++D   W+AM+ G A  G  E 
Sbjct: 397 YIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 456

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ ++  +    + P+E T+  V++ACT      +  K F   + +  +   +     LV
Sbjct: 457 ALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLV 516

Query: 523 TMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            + ++ G ++ A EV +    K + + W +++ G   +  +  A  V K++
Sbjct: 517 DLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 567



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 213/476 (44%), Gaps = 38/476 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+ N   +N ++  Y R    Q  ++L+L + R G+     T   + K     
Sbjct: 93  RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 152

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +GRQ+H   +K G   +V V T+LV +Y+    ++  R VFD   +++V++W  ++
Sbjct: 153 IALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 212

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y +    +    LF  M+ + + P + T   VL   +    + T  +VH+ V     E
Sbjct: 213 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 272

Query: 212 VVTSVCNALISMY------------LKSKMVRD-------------------ARAVFDGM 240
               + NA+I MY             +S   RD                   AR  FD M
Sbjct: 273 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 332

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            ++D ++W +M+ GY+ +    EA E F NM     +    T VSV+  CA    L L  
Sbjct: 333 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE 392

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            + + + +N I  D  +R  L+  Y KCG ++ A  IF  M + +D  +WTAMI G   N
Sbjct: 393 WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQ-RDKFTWTAMIVGLAVN 451

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTA- 418
           G  + A++ F  M +  + P+  TY  +L+A        +   + ++   +       A 
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511

Query: 419 ---LLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
              L++   + G L EA +V E +  K + + W A+LAG     +++ A  + +Q+
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 567



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 212/437 (48%), Gaps = 47/437 (10%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV--AYSKCGKMEDASKIFSM 340
            +S+++ C +  +L+   Q+H Q +K G++ +  ++  +M      + G  + A ++F  
Sbjct: 42  LISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 98

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQPAVS- 396
           + E  ++  W  MI G+ +     L V+ + +M R GV+P+ +T+  +    T   A+  
Sbjct: 99  IPE-PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 157

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             Q+H H++K   + +  V TAL+  Y+  G LD A  VF++  + D++ W+ +++ Y +
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 217

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
           +G  E + +++  +  + V P   T   V++AC+     +  GK+ H+     K+ + L 
Sbjct: 218 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK-LKDLRTGKKVHSYVKNCKVESNLV 276

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDL------------------------------ 546
           + +A++ MY+  G ++SA  +F+    RD+                              
Sbjct: 277 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 336

Query: 547 -VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
            VSW +MI GY +    K+ALE+F+ M+  +++ D  T + V+TAC H G ++ G ++  
Sbjct: 337 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-EWIR 395

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQ 665
             ++ + I   +   + ++D+Y + G ++KA  I   M      T W  ++     +++ 
Sbjct: 396 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT-WTAMIVG---LAVN 451

Query: 666 PHDSAIYVLLSNMYAAT 682
            H      + SNM  A+
Sbjct: 452 GHGEKALDMFSNMLKAS 468


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/641 (36%), Positives = 370/641 (57%), Gaps = 22/641 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGA 276
           N+LI++Y K    + AR +FD M  R+ ++W++++ GY+     +E    F N+  L  A
Sbjct: 65  NSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSA 124

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                 F  V+  CA +  ++  +Q H  +LK+G+     ++  L+  YS+C  ++ A +
Sbjct: 125 YPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQ 184

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           I   +    DV S+ +++S  +++G    A     +M  E V  +  TY  +L     + 
Sbjct: 185 ILDTVPG-DDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIR 243

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             Q    +HA ++KT       V + L++ Y K G +  A K F+ + ++++VAW+A+L 
Sbjct: 244 DLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLT 303

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            Y Q G  E  + ++ ++  E  +PNEFTF+ ++NAC A   A+  G   H   + +   
Sbjct: 304 AYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNAC-ASLVALAYGDLLHGRIVMSGFK 362

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           N L V +AL+ MYSK GNI+S+  VF     RD+++WN+MICGY+ HG  K+AL VF++M
Sbjct: 363 NHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDM 422

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
                  + +TFIGV++AC H  LV EG  YFD ++ +  + P +EHY+CMV L  RAG+
Sbjct: 423 MSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGL 482

Query: 633 LEKAMDIINRMP-FAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
           L++A + +            WRT+L AC +              I + PHD   Y LLSN
Sbjct: 483 LDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSN 542

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           M+A    W    ++RKLM +R +KKE G SW++++N T+ F++   +HP+S QI+ K+++
Sbjct: 543 MHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQ 602

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L   +K  GY PD   VL D++DE KE  LS HSE+LA+A+GL+  P   P++I+KNLR+
Sbjct: 603 LLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRM 662

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH  +KLISK   R I+VRD NRFHHF+EGLC+C D+W
Sbjct: 663 CDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 252/468 (53%), Gaps = 11/468 (2%)

Query: 96  FGRQVHCE-CVKSGFARDVNVS--TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           FG+ +H +  V++  ++D +++   SL++LY +    +  R++FD M + NVVSW++L+ 
Sbjct: 41  FGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMM 100

Query: 153 GYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           GY        VL LF  +  ++   PN + F+ VL   AD G V    Q H  ++K+G  
Sbjct: 101 GYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLL 160

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V NALI MY +   V  A  + D +   D  ++NS+++  V +    EA +    M
Sbjct: 161 LHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRM 220

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                     T+VSV+ LCA  ++L+L  Q+H+Q+LK G+ FD  + + L+  Y KCG++
Sbjct: 221 VDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEV 280

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            +A K F  +R+ ++VV+WTA+++ +LQNG  +  +N F +M  E  RPN FT++++L A
Sbjct: 281 LNARKQFDGLRD-RNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNA 339

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             ++        +H  I+ + ++    VG AL+N Y K G +D +  VF  +  +D++ W
Sbjct: 340 CASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITW 399

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AM+ GY+  G  + A+ +++ + S G  PN  TF  V++AC   +   E    F     
Sbjct: 400 NAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMK 459

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFK--RQRKRDLVSWNSMI 553
           K  +   L   + +V +  + G ++ A    K   Q K D+V+W +++
Sbjct: 460 KFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLL 507



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 197/439 (44%), Gaps = 14/439 (3%)

Query: 26  FYSKKDQS-----LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            YSK  QS     LFDR  QRN V ++ L+  Y       E L LF  +  L        
Sbjct: 70  LYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEY 129

Query: 81  LSSVLKTCGCLFDHVF-GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           + +++ +C      V  G+Q H   +KSG      V  +L+ +Y R  +V+   ++ D +
Sbjct: 130 IFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTV 189

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              +V S+ S+LS    +       ++  RM  E +  +S T+ +VLG+ A    +   +
Sbjct: 190 PGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGL 249

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  ++K G      V + LI  Y K   V +AR  FDG+ DR+ + W +++  Y+ N 
Sbjct: 250 QIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNG 309

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              E    F  M L        TF  ++  CA+   L     LH +++ +G      +  
Sbjct: 310 HFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGN 369

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YSK G ++ +  +FS M   +DV++W AMI G+  +G    A+  F  M   G  
Sbjct: 370 ALINMYSKSGNIDSSYNVFSNMMN-RDVITWNAMICGYSHHGLGKQALLVFQDMMSAGEC 428

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHII-----KTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           PN  T+  +L+A   ++  Q   +       K + E      T ++    + G+LDEA  
Sbjct: 429 PNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAEN 488

Query: 435 VFELIDEK--DIVAWSAML 451
             +   +   D+VAW  +L
Sbjct: 489 FMKTTTQVKWDVVAWRTLL 507



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 162/334 (48%), Gaps = 4/334 (1%)

Query: 26  FYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVL 85
           F+      + D  P  +   YN +L          EA  +   +    +     T  SVL
Sbjct: 177 FHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVL 236

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C  + D   G Q+H + +K+G   DV VS++L+D Y +   V + R+ FD + + NVV
Sbjct: 237 GLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVV 296

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +WT++L+ Y +N   +  L LF +M++E  +PN FTF+ +L   A    +A    +H  +
Sbjct: 297 AWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRI 356

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           + +G +    V NALI+MY KS  +  +  VF  M +RD ITWN+M+ GY  + L  +A 
Sbjct: 357 VMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQAL 416

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMV 323
             F +M  AG      TF+ V+  C     ++       Q++K   D +  +   T ++ 
Sbjct: 417 LVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKK-FDVEPGLEHYTCMVA 475

Query: 324 AYSKCGKMEDASKIFSMMREMK-DVVSWTAMISG 356
              + G +++A        ++K DVV+W  +++ 
Sbjct: 476 LLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNA 509


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/737 (35%), Positives = 395/737 (53%), Gaps = 41/737 (5%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           R+VFD +   +  ++ +L+  Y+        ++L+  M    + PN +TF  VL   +  
Sbjct: 53  RQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSAL 112

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             +     +H      G      V  ALI +Y++      A  VF  M  RD + WN+M+
Sbjct: 113 ADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAML 172

Query: 253 AGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           AGY  + ++  A     +M    G     ST VS++ L A    L     +H+  L+  +
Sbjct: 173 AGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYL 232

Query: 312 DFDHN---IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
           D +     I T L+  Y+KC  +  A ++F  M  +++ V+W+A+I G +    +  A N
Sbjct: 233 DQNEEQVLIGTALLDMYAKCKHLVYACRVFHGM-TVRNEVTWSALIGGFVLCDRMTEAFN 291

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPF-------------QVHAHIIKTNYEKSFSV 415
            F  M  EG+          L+A    S               Q+HA + K+      + 
Sbjct: 292 LFKDMLVEGM--------CFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTA 343

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
           G +LL+ Y K G+++EA  +F+ I  KD +++ A+L+GY Q G  E A  +++++ +  V
Sbjct: 344 GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
           +P+  T  S+I AC+   AA++ G+  H   I   L     + ++L+ MY+K G I+ + 
Sbjct: 404 QPDIATMVSLIPACSH-LAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSR 462

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           +VF +   RD+VSWN+MI GY  HG  K+A  +F  M+ Q  E D +TFI +I AC+H+G
Sbjct: 463 QVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSG 522

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
           LV EG+ +FD M +++ I P MEHY CMVDL +R G L++A   I  MP  A   VW  +
Sbjct: 523 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGAL 582

Query: 656 LAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
           L ACR+                L P  +  +VLLSN+++A G + E A VR +   +  K
Sbjct: 583 LGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFK 642

Query: 702 KEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE 761
           K  G SWIE+    ++F+ GD SHP S  IY +L+ +   +K  GY+ DTS+VLQD+++E
Sbjct: 643 KSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEE 702

Query: 762 HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
            KE  L  HSE+LAIAFG+++      + + KNLRVCGDCHT IK ++ +  R I+VRD 
Sbjct: 703 EKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDA 762

Query: 822 NRFHHFKEGLCSCGDYW 838
           NRFHHFK G CSCGD+W
Sbjct: 763 NRFHHFKNGQCSCGDFW 779



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/586 (27%), Positives = 293/586 (50%), Gaps = 22/586 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR P  +   YN L+  Y        A++L+  +    +P    T   VLK C  L
Sbjct: 53  RQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSAL 112

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR +H      G   D+ VST+L+DLY+R         VF  M   +VV+W ++L
Sbjct: 113 ADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAML 172

Query: 152 SGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK--- 207
           +GYA + M    +     MQ   G++PN+ T  ++L +LA  G +     VH   ++   
Sbjct: 173 AGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYL 232

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +  E    +  AL+ MY K K +  A  VF GM  R+ +TW++++ G+V  +   EAF  
Sbjct: 233 DQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNL 292

Query: 268 FNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           F +M + G   L+ ++  S +++CA+  +LR+  QLH+ + K+GI  D      L+  Y+
Sbjct: 293 FKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYA 352

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G + +A+ +F  +  +KD +S+ A++SG++QNG  + A   F +M    V+P+  T  
Sbjct: 353 KAGLINEATMLFDEI-AIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMV 411

Query: 387 IILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            ++ A   ++  Q     H  +I        S+  +L++ Y K G +D + +VF+ +  +
Sbjct: 412 SLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPAR 471

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           DIV+W+ M+AGY   G  + A  ++  + ++G +P++ TF  +I AC+  S  V +GK +
Sbjct: 472 DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSH-SGLVTEGKHW 530

Query: 503 -----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGY 556
                H   I  ++ + +C    +V + ++ G ++ A +  +    K D+  W +++   
Sbjct: 531 FDTMTHKYGILPRMEHYIC----MVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGAC 586

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
             H +     +V + +++   E  G  F+ +    + AG  DE  +
Sbjct: 587 RIHKNIDLGKQVSRMIQKLGPEGTG-NFVLLSNIFSAAGRFDEAAE 631



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 230/458 (50%), Gaps = 21/458 (4%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFD +   D+  +N+++  Y        A + + +M        + TF  V+K C+ 
Sbjct: 52  ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             +L   R +H+     G+  D  + T L+  Y +C +   A+ +F+ M  M+DVV+W A
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKM-PMRDVVAWNA 170

Query: 353 MISGHLQNGAIDLAVNFFCQMT-REGVRPNGFTYSIILT--AQPAVSPFQ---VHAHIIK 406
           M++G+  +G    A+     M  R G+RPN  T   +L   AQ   + FQ   VHA+ ++
Sbjct: 171 MLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHG-ALFQGTSVHAYCLR 229

Query: 407 T---NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
                 E+   +GTALL+ Y K   L  A +VF  +  ++ V WSA++ G+        A
Sbjct: 230 AYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEA 289

Query: 464 VKIYRQLTSEGVK-PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
             +++ +  EG+   +  + +S +  C A  A +  G Q HA   K+ ++  L   ++L+
Sbjct: 290 FNLFKDMLVEGMCFLSATSVASALRVC-ASLADLRMGTQLHALLAKSGIHADLTAGNSLL 348

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           +MY+K G I  A+ +F     +D +S+ +++ GY Q+G  ++A  VFK+M+  +++ D  
Sbjct: 349 SMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIA 408

Query: 583 TFIGVITACTHAGLVDEGQ-QYFDIMVNEHHIYPTMEHYSC--MVDLYSRAGMLEKAMDI 639
           T + +I AC+H   +  G+  +  +++        +E   C  ++D+Y++ G ++ +  +
Sbjct: 409 TMVSLIPACSHLAALQHGRCSHGSVIIRG----LALETSICNSLIDMYAKCGRIDLSRQV 464

Query: 640 INRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSN 677
            ++MP A     W T++A   +  L    + +++ + N
Sbjct: 465 FDKMP-ARDIVSWNTMIAGYGIHGLGKEATTLFLSMKN 501



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 12/229 (5%)

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
           + R  +RP  F+ + +   +P   P    +H +K N E         L  ++ +G L  A
Sbjct: 3   LPRGHLRP--FSTAAVRLRRP---PSGSISHEVKDNKEWQQE-----LEQHIARGQLALA 52

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            +VF+ I   D  A++A++  Y+  G    A+ +YR +    V PN++TF  V+ AC+A 
Sbjct: 53  RQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA- 111

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
            A +  G+  HA +    L+  L VS+AL+ +Y +      A+ VF +   RD+V+WN+M
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171

Query: 553 ICGYAQHGHTKKALEVFKEMR-RQDLEFDGITFIGVITACTHAGLVDEG 600
           + GYA HG    A+    +M+ R  L  +  T + ++      G + +G
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQG 220


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/670 (35%), Positives = 381/670 (56%), Gaps = 26/670 (3%)

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           G+    +QVH   +  G      + N LI MY K   V  A +VFD M +R+ ++W +++
Sbjct: 18  GLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALM 77

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            GY+       +      MG +G +    TF + +K C     +    Q+H   +K+G +
Sbjct: 78  CGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFE 137

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
           +   +    +  YSKCG++  A ++F+ M   +++VSW AMI+GH   G    ++  F +
Sbjct: 138 WVSVVGNATIDMYSKCGRIGMAEQVFNKM-PFRNLVSWNAMIAGHTHEGNGRKSLVLFQR 196

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS--VGTALLNAYVKK 426
           M  +G  P+ FT++  L A  A+       Q+HA +I   +  S    + +A+++ Y K 
Sbjct: 197 MQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKC 256

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G L EA KVF+ I++K++++WSA++ G+AQ G+   A+ ++RQL       + F  S ++
Sbjct: 257 GYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLS-IM 315

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
               A  A VEQGKQ H   +K      + V+++++ MY K G  E A  +F   + R++
Sbjct: 316 MGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNV 375

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           VSW  MI GY +HG  +KA+ +F  M+   +E D + ++ +++AC+H+GL+ E Q+YF  
Sbjct: 376 VSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSR 435

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------ 660
           + N H + P +EHY+CMVD+  RAG L++A ++I  M    +  +W+T+L+ACR      
Sbjct: 436 LCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLE 495

Query: 661 --------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                   L  +   +   YV++SN+YA  G+W+E  RVRKL+  + +KKEAG SW+E+ 
Sbjct: 496 IGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEIN 555

Query: 713 NKTYSFLAGDISHPQSNQIYSKLEELSTRLK-DAGYKPDTSYVLQDIDDEHKEAILSQHS 771
            + + F  GD +HP + +I+  L+E+  R+K + GY     + L D+++E KE  L  HS
Sbjct: 556 KEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHS 615

Query: 772 ERLAIAFGLVA---TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
           E+LAI   LV       G  +++ KNLRVCGDCH  IK +SK+ ++  VVRD NRFH F+
Sbjct: 616 EKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFE 675

Query: 829 EGLCSCGDYW 838
           +GLCSCGDYW
Sbjct: 676 DGLCSCGDYW 685



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/505 (28%), Positives = 261/505 (51%), Gaps = 12/505 (2%)

Query: 81  LSSVLKTC--GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           L+ +L+ C    LFD   G QVH   V  GF  D+ ++  L+D+Y + + V+    VFD 
Sbjct: 7   LAKLLRNCSKNGLFDQ--GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDR 64

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M E NVVSWT+L+ GY +       L L   M   G+KPN FTFST L      G+V   
Sbjct: 65  MLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +Q+H M +K+G E V+ V NA I MY K   +  A  VF+ M  R+ ++WN+M+AG+   
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG--IDFDHN 316
               ++   F  M   G      TF S +K C     +R   Q+H+ ++  G  I   + 
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           I + ++  Y+KCG + +A K+F  + E K+++SW+A+I G  Q G +  A++ F Q+   
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRI-EQKNLISWSALIQGFAQEGNLLEAMDLFRQLRES 303

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
               +GF  SI++     ++      Q+H +I+K       SV  ++++ Y+K G+ +EA
Sbjct: 304 VSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEA 363

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            ++F  +  +++V+W+ M+ GY + G  E A+ ++ ++  +G++ +E  + ++++AC+  
Sbjct: 364 ERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHS 423

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNS 551
               E  + F       ++   +   + +V +  + G ++ A  + +  + K +   W +
Sbjct: 424 GLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQT 483

Query: 552 MICGYAQHGHTKKALEVFKEMRRQD 576
           ++     HG+ +   EV + + R D
Sbjct: 484 LLSACRVHGNLEIGREVGEILFRMD 508



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 213/419 (50%), Gaps = 41/419 (9%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           R     +++ C+         Q+H+  +  G  FD  +   L+  Y KC +++ A  +F 
Sbjct: 4   RQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFD 63

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV---- 395
            M E ++VVSWTA++ G+LQ G    ++   C+M   GV+PN FT+S  L A  A+    
Sbjct: 64  RMLE-RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVE 122

Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
           +  Q+H   +K+ +E    VG A ++ Y K G +  A +VF  +  +++V+W+AM+AG+ 
Sbjct: 123 NGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHT 182

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
             G+   ++ +++++  +G  P+EFTF+S + AC A   A+  G Q HA  I      ++
Sbjct: 183 HEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGAL-GAIRGGTQIHASLITRGFPISI 241

Query: 516 --CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
              ++SA+V +Y+K G +  A +VF R  +++L+SW+++I G+AQ G+  +A+++F+++R
Sbjct: 242 RNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLR 301

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQY----------FDIMV--------------- 608
                 DG     ++       LV++G+Q            DI V               
Sbjct: 302 ESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTE 361

Query: 609 NEHHIYPTME-----HYSCMVDLYSRAGMLEKAMDIINRMPFAA---SATVWRTVLAAC 659
               ++  M+      ++ M+  Y + G+ EKA+ + NRM           +  +L+AC
Sbjct: 362 EAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSAC 420



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 141/567 (24%), Positives = 268/567 (47%), Gaps = 48/567 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+FDR  +RN V +  L+  Y ++   + +L L   +   G+     T S+ LK CG L 
Sbjct: 60  SVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALG 119

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G Q+H  CVKSGF     V  + +D+Y +   +    +VF+ M   N+VSW ++++
Sbjct: 120 VVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIA 179

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G+       + L LF RMQ +G  P+ FTF++ L      G +    Q+H  +I  G  +
Sbjct: 180 GHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPI 239

Query: 213 VTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                + +A++ +Y K   + +A+ VFD +E ++ I+W++++ G+      +EA + F  
Sbjct: 240 SIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQ 299

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +  + + +       ++ + A    +   +Q+H  +LK     D ++   ++  Y KCG 
Sbjct: 300 LRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGL 359

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            E+A ++FS M ++++VVSWT MI+G+ ++G  + A++ F +M  +G+  +   Y  +L+
Sbjct: 360 TEEAERLFSEM-QVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLS 418

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           A         H+ +I+ + E  FS    L N +  K                +I  ++ M
Sbjct: 419 ACS-------HSGLIRESQE-YFS---RLCNNHQMK---------------PNIEHYACM 452

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +    + G  + A  +   +    +KPNE  + ++++AC      +E G++      +  
Sbjct: 453 VDILGRAGQLKEAKNLIENMK---LKPNEGIWQTLLSACRV-HGNLEIGREVGEILFRMD 508

Query: 511 LNNALCVSSALVT-MYSKKGNIESASEV--------FKRQRKRDLVSWNSMI----CGYA 557
            +N   V+  +++ +Y++ G  +    V         K++  +  V  N  I     G  
Sbjct: 509 TDNP--VNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDD 566

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITF 584
            H  T+K  E+ KEM R+  E  G  +
Sbjct: 567 THPLTEKIHEMLKEMERRVKEEVGYAY 593



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 177/343 (51%), Gaps = 13/343 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F++ P RN V +N ++  +  +   +++L LF  ++  G      T +S LK CG L
Sbjct: 160 EQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGAL 219

Query: 92  FDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
                G Q+H   +  GF   +   +++++VDLY +   + + ++VFD + + N++SW++
Sbjct: 220 GAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSA 279

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+ G+A+       ++LF +++      + F  S ++GV AD  +V    Q+H  ++K  
Sbjct: 280 LIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVP 339

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             +  SV N++I MYLK  +  +A  +F  M+ R+ ++W  M+ GY  + L  +A   FN
Sbjct: 340 SGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFN 399

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL-----MV- 323
            M L G EL    +++++  C+ +  +R +++  S++  N     H ++  +     MV 
Sbjct: 400 RMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNN-----HQMKPNIEHYACMVD 454

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
              + G++++A  +   M+   +   W  ++S    +G +++ 
Sbjct: 455 ILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIG 497



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 102/182 (56%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y  + Q +FDR  Q+N + ++ L+  + ++    EA++LF  +R     + G  LS ++ 
Sbjct: 258 YLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMG 317

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L     G+Q+HC  +K     D++V+ S++D+Y++    E+  R+F +M   NVVS
Sbjct: 318 VFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVS 377

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WT +++GY ++ + ++ + LF+RMQ++GI+ +   +  +L   +  G++  + +  + + 
Sbjct: 378 WTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLC 437

Query: 207 KN 208
            N
Sbjct: 438 NN 439


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 238/690 (34%), Positives = 385/690 (55%), Gaps = 53/690 (7%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVT 257
           QVH   IK G      + N +++     +    + AR +FD + + +   WN+M+ GY  
Sbjct: 36  QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSR 95

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
            +        +  M   G +  R TF  + K       L   RQLH  VLK+G+ ++  +
Sbjct: 96  LDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFV 155

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            T L+  Y  CG+++ A  +F +  +  DV++W  +IS + + G  + +   F  M  + 
Sbjct: 156 HTALVQMYLLCGQLDTARGVFDVCPK-ADVITWNMIISAYNKVGKFEESRRLFLVMEDKQ 214

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           V P   T  ++L+A   +       +VH+++     E +  +  A+++ Y   G +D A 
Sbjct: 215 VLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSAL 274

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTE-------------------------------G 462
            +F  ++ +DI++W+ +++G+  +G+ +                                
Sbjct: 275 GIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKE 334

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A++++R + +  VKP+EFT  SV+ AC A   A+E G+       + K+ N L V +AL+
Sbjct: 335 ALELFRNMQATNVKPDEFTMVSVLTAC-AHLGALELGEWIRTYIDRNKIKNDLFVRNALI 393

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY K G+++ A  +F+   +RD  +W +MI G A +GH +KAL++F  M +  +  D I
Sbjct: 394 DMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEI 453

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           T+IGV++ACTH GLVD+G++YF  M ++H I P + HY C+VDL +RAG L++A ++I  
Sbjct: 454 TYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIEN 513

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MP  A++ VW  +LA CR              ++ L+P + A+YVLL N+YAA   W + 
Sbjct: 514 MPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDL 573

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
             +R++M D+ +KK  G S IE+  + + F+AGD SHPQ+  I +KL++++  LK AGY 
Sbjct: 574 RELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYS 633

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
           PD S V  DI +E KE  + +HSE+LAIAFGL+ +P G  ++I KNLR+C DCH + KL+
Sbjct: 634 PDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGVTIRITKNLRMCMDCHNMAKLV 693

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           SK+  R+++VRD  RFHHFK GLCSC DYW
Sbjct: 694 SKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 246/531 (46%), Gaps = 44/531 (8%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFD 137
           L S+L+TC  + D +  +QVHC+ +K G   +  V  + V  +  T+   D    RR+FD
Sbjct: 21  LISLLETCESM-DQL--QQVHCQAIKKGLNAN-PVLQNRVMTFCCTHEYGDFQYARRLFD 76

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
           ++ E N+  W +++ GY+R       + L+  M   G+KP+ +TF  +      +  +  
Sbjct: 77  EIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 136

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             Q+H  V+K+G +    V  AL+ MYL    +  AR VFD     D ITWN +++ Y  
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                E+   F  M       T  T V V+  C+  K+LR  +++HS V    ++ +  +
Sbjct: 197 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 256

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE- 376
              ++  Y+ CG+M+ A  IF  M   +D++SWT ++SG    G ID+A N+F +M  + 
Sbjct: 257 ENAMIDMYADCGEMDSALGIFRSMNN-RDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 315

Query: 377 ------------------------------GVRPNGFTYSIILTAQPAVSPFQ----VHA 402
                                          V+P+ FT   +LTA   +   +    +  
Sbjct: 316 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRT 375

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           +I +   +    V  AL++ Y K G +D+A  +F  + ++D   W+AM+ G A  G  E 
Sbjct: 376 YIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 435

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ ++  +    + P+E T+  V++ACT      +  K F   + +  +   +     LV
Sbjct: 436 ALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLV 495

Query: 523 TMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            + ++ G ++ A EV +    K + + W +++ G   +  +  A  V K++
Sbjct: 496 DLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 546



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 213/476 (44%), Gaps = 38/476 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+ N   +N ++  Y R    Q  ++L+L + R G+     T   + K     
Sbjct: 72  RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 131

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +GRQ+H   +K G   +V V T+LV +Y+    ++  R VFD   +++V++W  ++
Sbjct: 132 IALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 191

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y +    +    LF  M+ + + P + T   VL   +    + T  +VH+ V     E
Sbjct: 192 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 251

Query: 212 VVTSVCNALISMY------------LKSKMVRD-------------------ARAVFDGM 240
               + NA+I MY             +S   RD                   AR  FD M
Sbjct: 252 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 311

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            ++D ++W +M+ GY+ +    EA E F NM     +    T VSV+  CA    L L  
Sbjct: 312 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGE 371

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            + + + +N I  D  +R  L+  Y KCG ++ A  IF  M + +D  +WTAMI G   N
Sbjct: 372 WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQ-RDKFTWTAMIVGLAVN 430

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTA- 418
           G  + A++ F  M +  + P+  TY  +L+A        +   + ++   +       A 
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490

Query: 419 ---LLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
              L++   + G L EA +V E +  K + + W A+LAG     +++ A  + +Q+
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQI 546



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 212/437 (48%), Gaps = 47/437 (10%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV--AYSKCGKMEDASKIFSM 340
            +S+++ C +  +L+   Q+H Q +K G++ +  ++  +M      + G  + A ++F  
Sbjct: 21  LISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDE 77

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQPAVS- 396
           + E  ++  W  MI G+ +     L V+ + +M R GV+P+ +T+  +    T   A+  
Sbjct: 78  IPE-PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEY 136

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             Q+H H++K   + +  V TAL+  Y+  G LD A  VF++  + D++ W+ +++ Y +
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
           +G  E + +++  +  + V P   T   V++AC+     +  GK+ H+     K+ + L 
Sbjct: 197 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLK-DLRTGKKVHSYVKNCKVESNLV 255

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDL------------------------------ 546
           + +A++ MY+  G ++SA  +F+    RD+                              
Sbjct: 256 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 315

Query: 547 -VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
            VSW +MI GY +    K+ALE+F+ M+  +++ D  T + V+TAC H G ++ G ++  
Sbjct: 316 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELG-EWIR 374

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQ 665
             ++ + I   +   + ++D+Y + G ++KA  I   M      T W  ++     +++ 
Sbjct: 375 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT-WTAMIVG---LAVN 430

Query: 666 PHDSAIYVLLSNMYAAT 682
            H      + SNM  A+
Sbjct: 431 GHGEKALDMFSNMLKAS 447


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/724 (36%), Positives = 395/724 (54%), Gaps = 37/724 (5%)

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS------FTFSTVLGVLADEG 193
           N+   V    L+S   + K+  +V E    M + GI  N       F     LG L+D  
Sbjct: 42  NQQGQVENLHLISLAKQGKLR-QVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGK 100

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
           +    +Q     + N  + +    N ++ MY   K    A   FD + DRD  +W ++++
Sbjct: 101 LFHNRLQR----MANSNKFID---NCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIIS 153

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
            Y       EA   F  M   G     S F ++I   A    L L +Q+HSQ+++     
Sbjct: 154 AYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAA 213

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D +I T +   Y KCG + D +++ +     K  V+ T ++ G+ Q      A+  F +M
Sbjct: 214 DISIETLISNMYVKCGWL-DGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLLFSKM 272

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EGV  +GF +SIIL A  A+       Q+H++ IK   E   SVGT L++ YVK    
Sbjct: 273 ISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARF 332

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           + A + FE I E +  +WSA++AGY Q G  + A+++++ + S+GV  N F ++++  AC
Sbjct: 333 EAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQAC 392

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
           +A S  +  G Q HA +IK  L   L   SA++TMYSK G ++ A + F    K D V+W
Sbjct: 393 SAVSDLI-CGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAW 451

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
            ++IC +A HG   +AL +FKEM+   +  + +TFIG++ AC+H+GLV EG+Q+ D M +
Sbjct: 452 TAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTD 511

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC---------- 659
           ++ + PT++HY+CM+D+YSRAG+L +A+++I  MPF      W+++L  C          
Sbjct: 512 KYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGM 571

Query: 660 ----RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                +  L P DSA YV++ N+YA  G W E A+ RK+M +R ++KE   SWI VK K 
Sbjct: 572 IAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKV 631

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK-PDTSYVLQDIDDEHKEAILSQHSERL 774
           + F+ GD  HPQ+ QIYSKL+EL+   K    +  +    L D   E K+ +L  HSERL
Sbjct: 632 HRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDF-TERKDQLL-DHSERL 689

Query: 775 AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           AIA+GL+ T A  P+ + KN R C DCH   K +S +  R++VVRD NRFHH   G CSC
Sbjct: 690 AIAYGLICTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHHINSGECSC 749

Query: 835 GDYW 838
            DYW
Sbjct: 750 RDYW 753



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 262/541 (48%), Gaps = 10/541 (1%)

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG 132
           G+ +   +   + K CG L     G+  H    +   +    +   ++ +Y    +    
Sbjct: 75  GISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMANSNKF-IDNCILQMYCDCKSFTAA 133

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
            R FD + + ++ SW +++S Y      D  + LF RM   GI PN   FST++   AD 
Sbjct: 134 ERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADP 193

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
            ++    Q+H+ +I+       S+   + +MY+K   +  A    + M  + ++    ++
Sbjct: 194 SMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLM 253

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            GY     + +A   F+ M   G EL    F  ++K CA   +L   +Q+HS  +K G++
Sbjct: 254 VGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLE 313

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            + ++ T L+  Y KC + E A + F  + E  D  SW+A+I+G+ Q+G  D A+  F  
Sbjct: 314 SEVSVGTPLVDFYVKCARFEAARQAFESIHEPND-FSWSALIAGYCQSGKFDRALEVFKT 372

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           +  +GV  N F Y+ I  A  AVS      Q+HA  IK       S  +A++  Y K G 
Sbjct: 373 IRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGK 432

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           +D A + F  ID+ D VAW+A++  +A  G    A+++++++   GV+PN  TF  ++NA
Sbjct: 433 VDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNA 492

Query: 489 CTAPSAAVEQGKQF-HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDL 546
           C+  S  V++GKQF  + + K  +N  +   + ++ +YS+ G +  A EV +    + D+
Sbjct: 493 CS-HSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDV 551

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           +SW S++ G     + +  +     + R D   D  T++ +      AG  DE  Q+  +
Sbjct: 552 MSWKSLLGGCWSRRNLEIGMIAADNIFRLD-PLDSATYVIMFNLYALAGKWDEAAQFRKM 610

Query: 607 M 607
           M
Sbjct: 611 M 611



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 209/430 (48%), Gaps = 11/430 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           +  FD+   R+   +  ++  Y  +    EA+ LFL +  LG+    S  S+++ +    
Sbjct: 134 ERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADP 193

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            + D   G+Q+H + ++  FA D+++ T + ++Y++   ++      + M   + V+ T 
Sbjct: 194 SMLD--LGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTG 251

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+ GY +   N   L LF +M  EG++ + F FS +L   A  G + T  Q+H+  IK G
Sbjct: 252 LMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG 311

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E   SV   L+  Y+K      AR  F+ + + +  +W++++AGY  +     A E F 
Sbjct: 312 LESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFK 371

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G  L    + ++ + C+   +L    Q+H+  +K G+    +  + ++  YSKCG
Sbjct: 372 TIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCG 431

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           K++ A + F +  +  D V+WTA+I  H  +G    A+  F +M   GVRPN  T+  +L
Sbjct: 432 KVDYAHQAF-LAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLL 490

Query: 390 TAQPAVSPFQVHAHIIKTNYEK-----SFSVGTALLNAYVKKGILDEAAKVFELID-EKD 443
            A       +     + +  +K     +      +++ Y + G+L EA +V   +  E D
Sbjct: 491 NACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPD 550

Query: 444 IVAWSAMLAG 453
           +++W ++L G
Sbjct: 551 VMSWKSLLGG 560


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/615 (38%), Positives = 360/615 (58%), Gaps = 20/615 (3%)

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           + ++  +N+M+ G V+ +    A   + +M  A       TF  V+K CA      L   
Sbjct: 66  NSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVM 125

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +HS V K G D D  ++T ++  YSKCG + DA K+F  M  +K+VVSWT MI G ++ G
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMV-VKNVVSWTGMICGCIEFG 184

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS----VGT 417
               AV+ F  +   G+RP+GF    +L A   +   +    I +   E   S    V T
Sbjct: 185 KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVAT 244

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           +L++ Y K G ++EA  VF+ + EKDIV WSAM+ GYA  G    A++++ ++    V+P
Sbjct: 245 SLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRP 304

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           + +     +++C A   A+E G          +  +   + ++L+  Y+K G++E A  V
Sbjct: 305 DCYAMVGALSSC-ASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGV 363

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           +K  +++D V +N++I G A +G    A  VF +M +  +  +  TF+G++  CTHAGLV
Sbjct: 364 YKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLV 423

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           D+G+ YF+ M ++  + PT+EHY CMVDL +RAG L++A ++I  MP  A+  VW ++L 
Sbjct: 424 DDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLG 483

Query: 658 ACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
            CRL              I L+P +S  YVLLSN+Y+A+  W E  ++R  +N++ ++K 
Sbjct: 484 GCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKL 543

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHK 763
            GYSW+EV    + FL GD SHP S +IY KLE L   LK+AGY P T +VL D+++E K
Sbjct: 544 PGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEEK 603

Query: 764 EAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNR 823
           E  L  HSE+LA+AF L++T A   +++VKNLRVCGDCH  IK ISK+  R+IV+RD NR
Sbjct: 604 EHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNNR 663

Query: 824 FHHFKEGLCSCGDYW 838
           FH F +G CSC DYW
Sbjct: 664 FHCFSDGACSCRDYW 678



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 237/492 (48%), Gaps = 28/492 (5%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRT-----NNVEDGRRVFDDM-NESNVVSWTSLL 151
           +  HC  ++     D      L+ + +R+     NN +    VF      SN   + +++
Sbjct: 21  KLAHCRLLRLNLHHD----NDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMI 76

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G       +  + L+  M    I P+SFTFS VL   A   +    V +H++V K G +
Sbjct: 77  RGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFD 136

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V   ++  Y K   +RDA  VFD M  ++ ++W  M+ G +      EA + F  +
Sbjct: 137 CDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGL 196

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G        V V++ CA   +L   R +   + + G+  +  + T L+  Y+KCG M
Sbjct: 197 LESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSM 256

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E+A  +F  M E KD+V W+AMI G+  NG    A+  F +M +  VRP+ +     L++
Sbjct: 257 EEARFVFDGMVE-KDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSS 315

Query: 392 QPAVSPFQVHAHIIK--TNYEKSFS---VGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
             ++   ++  +  K   NYE+  S   +GT+L++ Y K G ++EA  V++++ EKD V 
Sbjct: 316 CASLGALEL-GNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVV 374

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF---- 502
           ++A+++G A  G    A  ++ Q+   G+ PNE TF  ++  CT  +  V+ G+ +    
Sbjct: 375 FNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCT-HAGLVDDGRHYFNSM 433

Query: 503 -HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK-RQRKRDLVSWNSMICGYAQHG 560
            H  S+   + +  C    +V + ++ G ++ A  + K    K +++ W S++ G   H 
Sbjct: 434 SHDFSVTPTIEHYGC----MVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHR 489

Query: 561 HTKKALEVFKEM 572
            T+ A  V K++
Sbjct: 490 ETQLAEHVLKQL 501



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 205/447 (45%), Gaps = 14/447 (3%)

Query: 34  LFDRSP-QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +F ++P   N   YN ++           A++L+  + +  +     T S VLK C  L 
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G  +H    K+GF  DV V T++V  Y +   + D  +VFDDM   NVVSWT ++ 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G          ++LF  +   G++P+ F    VL   A  G + +   +   + + G   
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  +L+ MY K   + +AR VFDGM ++D + W++M+ GY +N L  EA E F  M 
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGK 330
                      V  +  CA+   L L     ++ L N  +F  N  + T L+  Y+KCG 
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNW--AKGLMNYEEFLSNPVLGTSLIDFYAKCGS 356

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ME+A  ++ MM+E KD V + A+ISG    G +  A   F QM + G+ PN  T+  +L 
Sbjct: 357 MEEALGVYKMMKE-KDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLC 415

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGT------ALLNAYVKKGILDEAAKVFELIDEK-D 443
                       H   +     FSV         +++   + G LDEA  + + +  K +
Sbjct: 416 GCTHAGLVDDGRHYFNS-MSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKAN 474

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           ++ W ++L G     +T+ A  + +QL
Sbjct: 475 VIVWGSLLGGCRLHRETQLAEHVLKQL 501



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 208/477 (43%), Gaps = 77/477 (16%)

Query: 26  FYSK----KDQ-SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK    +D   +FD    +N V +  ++         +EA++LF G+   GL   G  
Sbjct: 148 FYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFV 207

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           +  VL+ C  L D   GR +   C++  G +R+V V+TSLVD+Y +  ++E+ R VFD M
Sbjct: 208 IVRVLRACARLGDLESGRWID-RCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGM 266

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E ++V W++++ GYA N +    +ELF  M+   ++P+ +     L   A  G +    
Sbjct: 267 VEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGN 326

Query: 200 QVHTMVIKNGGEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
               ++  N  E +++  +  +LI  Y K   + +A  V+  M+++D + +N++++G   
Sbjct: 327 WAKGLM--NYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAM 384

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                 AF  F  MG  G      TFV ++  C     +   R        N +  D ++
Sbjct: 385 YGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYF-----NSMSHDFSV 439

Query: 318 -----RTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
                  G MV   ++ G +++A  +   M    +V+ W +++ G              C
Sbjct: 440 TPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGG--------------C 485

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE-KSFSVGTALL--NAYVKKGI 428
           ++ RE                      Q+  H++K   E + ++ G  +L  N Y     
Sbjct: 486 RLHRET---------------------QLAEHVLKQLIELEPWNSGHYVLLSNIYSASRR 524

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQ-----------IGDTEGAV--KIYRQLTS 472
            DEA K+   ++EK +      L GY+            +GDT   +  KIY +L S
Sbjct: 525 WDEAEKIRSTVNEKGM----QKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLES 577


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/515 (43%), Positives = 325/515 (63%), Gaps = 50/515 (9%)

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M  +GV+PN FT S ++ A  +++      Q H +IIK  +E    V TAL++ Y + G 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 429 LDEAAKVFELIDEK-------------------------------DIVAWSAMLAGYAQI 457
           L++A  VF+ + E+                               D+V+W+A++AGYAQ 
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G  + ++ ++ Q+   G+K + F   SV++AC A  AA+E G+QFHA  +++     + V
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSAC-ADLAALELGRQFHAYVVQSGFALDIVV 179

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            SALV MY+K G++E A +VF +  +R+ VSWNS+I G AQHG    A+ +F++M +  +
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + + I+F+GV++AC+H GLV+EG+ YF++M   + I P + HY+CM+DL  RAG L++A 
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
           + IN MP     +VW  +L ACR              L+ ++   + IYVLLSN+YAA G
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAG 359

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W + A+VRKLM DR V K+ GYSWIEVK   ++F+AG+ SHPQ  +I+  LE LS ++K
Sbjct: 360 QWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMK 419

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
            AGY P+ ++VLQD++D+ KE  LS HSE+LAIAFG++ T  G  +++ KNLRVCGDCHT
Sbjct: 420 AAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHT 479

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VIK IS    R IVVRD NRFHHFK+G CSCGDYW
Sbjct: 480 VIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 175/343 (51%), Gaps = 35/343 (10%)

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G +  + T  +V+K CA+   L   +Q H+ ++K G + D  ++T L+  Y++CG +EDA
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 335 SKIFSMM------------------REMK------------DVVSWTAMISGHLQNGAID 364
             +F  M                  R+MK            DVVSWTA+I+G+ QNG  D
Sbjct: 65  GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALL 420
            ++N F QM + G++ + F    +L+A   ++      Q HA+++++ +     VG+AL+
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + Y K G +++A +VF+ + +++ V+W++++ G AQ G    AV ++ Q+   G+KPNE 
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEI 244

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           +F  V++AC+      E    F+  +    +   +   + ++ +  + G ++ A      
Sbjct: 245 SFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING 304

Query: 541 QR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
              + D+  W +++     HG+T+ A  + + +   +++  GI
Sbjct: 305 MPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGI 347



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 158/338 (46%), Gaps = 38/338 (11%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M  +G+KPN FT STV+   A    +    Q H  +IK G E    V  AL+ MY +   
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 230 VRDARAVFDGMEDRDSITWNSM-------------------------------VAGYVTN 258
           + DA  VFD M +R + TWN+M                               +AGY  N
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               E+   FN M   G +  R    SV+  CA    L L RQ H+ V+++G   D  + 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           + L+  Y+K G MEDA ++F  M + ++ VSW ++I+G  Q+G  + AV  F QM + G+
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQ-RNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239

Query: 379 RPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYE--KSFSVGTALLNAYVKKGILDEAA 433
           +PN  ++  +L+A      V+  + + +++  NY      S  T +++   + G LDEA 
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299

Query: 434 KVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
                +  E D+  W A+L      G+TE A +I   L
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHL 337



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 150/319 (47%), Gaps = 32/319 (10%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TLS+V+K C  +     G+Q H   +K GF  DV V T+LV +Y R  ++ED   VFD M
Sbjct: 12  TLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKM 71

Query: 140 NESNVVSWTSLLS-------------------------------GYARNKMNDRVLELFH 168
           +E +  +W ++++                               GYA+N   D  L +F+
Sbjct: 72  SERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFN 131

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           +M+  G+K + F   +VL   AD   +    Q H  V+++G  +   V +AL+ MY KS 
Sbjct: 132 QMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSG 191

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            + DA  VFD M  R+ ++WNS++ G   +    +A   F  M  AG +    +FV V+ 
Sbjct: 192 SMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLS 251

Query: 289 LCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
            C+ T  +   R   + + +N GI  D +  T ++    + G +++A    + M    DV
Sbjct: 252 ACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDV 311

Query: 348 VSWTAMISGHLQNGAIDLA 366
             W A++     +G  +LA
Sbjct: 312 SVWGALLGACRIHGNTELA 330



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 123/229 (53%), Gaps = 6/229 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           KK   LF    +R+ V +  ++  Y ++    E+LN+F  +R+ G+      + SVL  C
Sbjct: 93  KKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSAC 152

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     GRQ H   V+SGFA D+ V ++LVD+Y ++ ++ED  +VFD M + N VSW 
Sbjct: 153 ADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWN 212

Query: 149 SLLSGYARN-KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           S+++G A++ + ND VL LF +M   GIKPN  +F  VL   +  G+V        ++ +
Sbjct: 213 SIITGCAQHGRGNDAVL-LFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQ 271

Query: 208 NGGEVVTSVCN--ALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           N G +V  V +   +I +  ++  + +A    +GM  + D   W +++ 
Sbjct: 272 NYG-IVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLG 319


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/661 (38%), Positives = 383/661 (57%), Gaps = 28/661 (4%)

Query: 200 QVHTMVIKNG---GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
           Q+H  +++ G        S   A  S+  +S  ++ AR VF  + +  S T NS++ G  
Sbjct: 6   QIHAQMLRTGLFFDPFTASKIVAFCSLQ-ESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
              LH EA   +  M + G    R TF S+ K C  + E    +Q+H    K G   D  
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTY 121

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR- 375
            +  LM  YS CG +  A K+F  M E K VVSW  MI  H Q    + AV  F +M + 
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKM-EDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           E V+PN  T   +LTA           ++H +I +  + +   + T L++ Y K G +  
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQL 240

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A  +F+   EK++ +W+ M+ G+ +  + E A+ ++R++ ++G+K ++ T +S++ ACT 
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
              A+E GK  HA   K +++  + + +ALV MY+K G+IE+A +VF    ++D+++W +
Sbjct: 301 -LGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTA 359

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +I G A  G  + AL+ F EM  + ++ D ITF+GV+ AC+HAG VDEG  +F+ M + +
Sbjct: 360 LILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTY 419

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----------- 660
            I PT+EHY  +VD+  RAG + +A ++I  MP A    V   +L ACR           
Sbjct: 420 GIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERA 479

Query: 661 ---LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS 717
              L+ + P+ S  YVLLSN+Y ++  W+E  R R+LM +R ++K  G S IEV    + 
Sbjct: 480 AKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHE 539

Query: 718 FLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIA 777
           F+ GD SH QS++I   LE++ ++LK+AGY PD S VL D+ +E KE  LS HSE+LAIA
Sbjct: 540 FVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIA 599

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           FGL++T  G P+++VKNLR+C DCH+  KLISKL  R+I+VRD NRFHHFK+G CSC  +
Sbjct: 600 FGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGF 659

Query: 838 W 838
           W
Sbjct: 660 W 660



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 222/449 (49%), Gaps = 11/449 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDL--YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +Q+H + +++G   D   ++ +V       + +++  R VF  +      +  S++ G  
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
              ++   L  +  M V+G+ P+ +TF ++     +    +   Q+H    K G    T 
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNS---SEGKQIHCHSTKLGFASDTY 121

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA- 274
             N L++MY     +  AR VFD MED+  ++W +M+  +   +   EA   F+ M  + 
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
             +    T V+V+  CA  ++L + +++H  + ++G      + T LM  Y KCG ++ A
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             +F   +E K++ SW  MI+GH+++   + A+  F +M  +G++ +  T + +L A   
Sbjct: 242 RDLFDKAQE-KNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +   +    +HA+I K   +   ++GTAL++ Y K G ++ A +VF  + EKD++ W+A+
Sbjct: 301 LGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTAL 360

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           + G A  G  E A++ + ++  +GVKP+  TF  V+ AC+      E    F++ S    
Sbjct: 361 ILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYG 420

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFK 539
           +   +     LV +  + G I  A E+ K
Sbjct: 421 IQPTIEHYGGLVDILGRAGRIAEAEELIK 449



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 182/359 (50%), Gaps = 5/359 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F + P       N ++      +LHQEAL  +  +   GL     T  S+ K+C    +
Sbjct: 44  VFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCR---N 100

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+HC   K GFA D     +L+++Y     +   R+VFD M +  VVSW +++  
Sbjct: 101 SSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGV 160

Query: 154 YARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           +A+    +  + LF RM + E +KPN  T   VL   A    +A   ++H  + ++G   
Sbjct: 161 HAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGR 220

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              +   L+ +Y K   V+ AR +FD  ++++  +WN M+ G+V +  + EA   F  M 
Sbjct: 221 HVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQ 280

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G +  + T  S++  C     L L + LH+ + K  ID D  + T L+  Y+KCG +E
Sbjct: 281 TKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIE 340

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            A ++F  M E KDV++WTA+I G    G  + A+ +F +M  +GV+P+  T+  +L A
Sbjct: 341 TAIQVFHEMPE-KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAA 398



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 124/261 (47%), Gaps = 1/261 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGC 90
           + +FD+   +  V +  ++  + +     EA+ LF   ++   +     TL +VL  C  
Sbjct: 140 RKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACAR 199

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
             D    +++H    + GF R V ++T L+D+Y +   V+  R +FD   E N+ SW  +
Sbjct: 200 ARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIM 259

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++G+  +   +  L LF  MQ +GIK +  T +++L      G +     +H  + K   
Sbjct: 260 INGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRI 319

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +V  ++  AL+ MY K   +  A  VF  M ++D +TW +++ G         A + F+ 
Sbjct: 320 DVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDE 379

Query: 271 MGLAGAELTRSTFVSVIKLCA 291
           M + G +    TFV V+  C+
Sbjct: 380 MHIKGVKPDAITFVGVLAACS 400



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 92/168 (54%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD++ ++N   +N ++  +  DS ++EAL LF  ++  G+     T++S+L  C  L
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHL 301

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ +H    K     DV + T+LVD+Y +  ++E   +VF +M E +V++WT+L+
Sbjct: 302 GALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALI 361

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            G A     +  L+ F  M ++G+KP++ TF  VL   +  G V   +
Sbjct: 362 LGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGI 409


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 272/834 (32%), Positives = 455/834 (54%), Gaps = 34/834 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC- 90
           ++ FDR P ++ + + RL+  + +    ++AL+LF  ++  G+        +VL  C   
Sbjct: 53  KACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSAD 112

Query: 91  --LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L +   GR++H     +    D  VST+L+ +Y + ++VED R+VFD +    VV W 
Sbjct: 113 PELLEE--GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWN 170

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++ YA+   +++ +++F+ M +EG+K    TF  VL   +    +  A  V   V + 
Sbjct: 171 AMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEER 230

Query: 209 GGEVV--TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
             + +  +S   AL++ Y     +  A   F      + I   +M+  Y   E   EA E
Sbjct: 231 EHDHLHDSSFATALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQRERWDEALE 289

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVA 324
            F  M L G +L R   ++V+  C+  + L   R +H       I FD ++  G  L+  
Sbjct: 290 LFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHG--FMREIRFDRHVNAGNALINM 347

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KCG +E+A ++F  M+  +DV+SW  +I+ H Q+     A++    M  +GV+ +  +
Sbjct: 348 YGKCGSLEEAVEVFRSMQH-RDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKIS 406

Query: 385 Y----SIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +     +   ++       +H+ I+++  +    +  A+L+ Y      D+A++VF  + 
Sbjct: 407 FVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMK 466

Query: 441 EKDIVAWSAMLAGYA-QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
            +D V+W+AM+  YA Q   +  A+ +++Q+   G  P+  +F + ++AC A ++  E G
Sbjct: 467 ARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAE-G 525

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K  H    +  L + + V++A++ MY+K G++  A ++F +    D++SWN MI  +AQH
Sbjct: 526 KLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQH 585

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH-IYPTME 618
           GH  + L  F+ M  +    + +TF+ V++AC+H GLV +G Q F  ++++   I P  E
Sbjct: 586 GHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAE 645

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISL 664
           HY CMVDL +RAG L+ A   I   P      +  T+L A +              L+ L
Sbjct: 646 HYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMEL 705

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P  SA YV+LSN+Y   G   E A++R+LM ++ ++KE  +S I VK + + F  GD +
Sbjct: 706 TPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTT 765

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           + ++ +I  +LE LS  +  AGY PDT+ +L D+ DE K+ +LS HSE+LAIAFGL++T 
Sbjct: 766 NARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTA 825

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G  L+I+KNLRVCGDCHT  K ISK+  R+IVVRD++RFHHF  G CSCGDYW
Sbjct: 826 PGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 157/571 (27%), Positives = 288/571 (50%), Gaps = 13/571 (2%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G++VH    KS   R   +   LV +Y+   ++ D +  FD M   + ++W  L+  + 
Sbjct: 16  LGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHG 75

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-ADEGIVATAVQVHTMVIKNGGEVVT 214
           +   +++ L LF  MQ+EG+ P +  F  VLG   AD  ++    ++H ++     E   
Sbjct: 76  QIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDH 135

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V   L+ MY K   V DAR VFDG+  +  + WN+M+  Y   + H +A + F  M L 
Sbjct: 136 YVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLE 195

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGKME 332
           G +  R TF+ V+  C+  K+L +A+ +   V +   D  H+    T L+  Y  CG +E
Sbjct: 196 GVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLE 255

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A + FS  R   +++  TAMI+ + Q    D A+  F  M  EGV+ +      +L A 
Sbjct: 256 QAFRAFS--RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNAC 313

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                 +    +H  + +  +++  + G AL+N Y K G L+EA +VF  +  +D+++W+
Sbjct: 314 SGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWN 373

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            ++A + Q      A+ +   +  +GVK ++ +F + +  C A S A+ +G+  H+  ++
Sbjct: 374 TIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAA-SEALAKGRMIHSWIVE 432

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY-AQHGHTKKALE 567
           + +   + + +A++ MY    + + AS VF+  + RD VSWN+MI  Y AQ   + +AL 
Sbjct: 433 SGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALL 492

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F++M+      D I+F+  ++AC     + EG+   D  + E  +   M   + ++++Y
Sbjct: 493 LFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHD-RIRETGLESNMTVANAVLNMY 551

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +++G L  A  +  +MP       W  +++A
Sbjct: 552 AKSGSLVLARKMFGKMPL-PDVISWNGMISA 581



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/502 (26%), Positives = 246/502 (49%), Gaps = 17/502 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           ++ +L V+AD   +    +VH  + K+  +    + + L+ MY+    + DA+A FD M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-LRLAR 300
            +D++TW  ++  +       +A   F +M L G       FV+V+  C+   E L   R
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H  +    ++ DH + T L+  Y KC  +EDA K+F  +R  K VV W AMI+ + Q 
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRH-KRVVEWNAMITAYAQQ 179

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK-------SF 413
              + A+  F  M  EGV+    T+  +L A   +   +V A ++K   E+         
Sbjct: 180 DHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEV-AKLVKLCVEEREHDHLHDS 238

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           S  TAL+N Y   G L++A + F      +++  +AM+  Y Q    + A+++++ +  E
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLE 297

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           GVK +     +V+NAC+ P   +E+G+  H    + + +  +   +AL+ MY K G++E 
Sbjct: 298 GVKLDRIACMAVLNACSGPR-GLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEE 356

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A EVF+  + RD++SWN++I  + QH    +AL +   M+   ++ D I+F+  +  C  
Sbjct: 357 AVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAA 416

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
           +  + +G+     +V E  I   +   + ++D+Y      + A  +   M  A     W 
Sbjct: 417 SEALAKGRMIHSWIV-ESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMK-ARDQVSWN 474

Query: 654 TVLAACRLISLQPHDSAIYVLL 675
            ++ A    + QP  S+  +LL
Sbjct: 475 AMITA---YAAQPRLSSEALLL 493


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 273/834 (32%), Positives = 455/834 (54%), Gaps = 34/834 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC- 90
           ++ FDR P ++ + + RL+  + +    ++AL+LF  ++  G+        +VL  C   
Sbjct: 53  KACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSAD 112

Query: 91  --LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L +   GR++H     +    D  VST+L+ +Y + ++VED R+VFD +    VV W 
Sbjct: 113 PELLEE--GRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWN 170

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++ YA+   +++ +++F+ M +EG+K    TF  VL   +    +  A  V   V + 
Sbjct: 171 AMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEER 230

Query: 209 GGEVV--TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
             + +  +S   AL++ Y     +  A   F      + I   +M+  Y   E   EA E
Sbjct: 231 EHDHLHDSSFATALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQRERWDEALE 289

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVA 324
            F  M L G +L R   ++V+  C+  + L   R +H       I FD ++  G  L+  
Sbjct: 290 LFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHG--FMREIRFDRHVNAGNALINM 347

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KCG +E+A ++F  M+  +DV+SW  +I+ H Q+     A++    M  +GV+ +  +
Sbjct: 348 YGKCGSLEEAVEVFRSMQH-RDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKIS 406

Query: 385 Y----SIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +     +  T++       +H+ I+++  +    +  A+L+ Y      D+A++VF  + 
Sbjct: 407 FVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMK 466

Query: 441 EKDIVAWSAMLAGYA-QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
            +D V+W+AM+  YA Q   +  A+ +++Q+   G  P+  +F + ++AC A ++  E G
Sbjct: 467 VRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAE-G 525

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K  H    +  L + + V++A++ MY+K G +  A ++F +    D++SWN MI  +AQH
Sbjct: 526 KLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQH 585

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH-IYPTME 618
           GH  + L  F+ M  +    + +TF+ V++AC+H GLV +G Q F  ++++   I P  E
Sbjct: 586 GHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAE 645

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISL 664
           HY CMVDL +RAG L+ A   I   P      +  T+L A +              L+ L
Sbjct: 646 HYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMEL 705

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P  SA YV+LSN+Y   G   E A++R+LM ++ ++KE  +S I VK + + F  GD +
Sbjct: 706 TPDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTT 765

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           + ++ +I  +LE LS  +  AGY PDT+ +L D+ DE K+ +LS HSE+LAIAFGL++T 
Sbjct: 766 NARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTA 825

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G  L+I+KNLRVCGDCHT  K ISK+  R+IVVRD++RFHHF  G CSCGDYW
Sbjct: 826 PGTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/571 (27%), Positives = 288/571 (50%), Gaps = 13/571 (2%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G++VH    KS   R   +   LV +Y+   ++ D +  FD M   + ++W  L+  + 
Sbjct: 16  LGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHG 75

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-ADEGIVATAVQVHTMVIKNGGEVVT 214
           +   +++ L LF  MQ+EG+ P +  F  VLG   AD  ++    ++H ++     E   
Sbjct: 76  QIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDH 135

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V   L+ MY K   V DAR VFDG+  +  + WN+M+  Y   + H +A + F  M L 
Sbjct: 136 YVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLE 195

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGKME 332
           G +  R TF+ V+  C+  K+L +A+ +   V +   D  H+    T L+  Y  CG +E
Sbjct: 196 GVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLE 255

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A + FS  R   +++  TAMI+ + Q    D A+  F  M  EGV+ +      +L A 
Sbjct: 256 QAFRAFS--RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNAC 313

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                 +    +H  + +  +++  + G AL+N Y K G L+EA +VF  +  +D+++W+
Sbjct: 314 SGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWN 373

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            ++A + Q      A+ +   +  +GVK ++ +F + +  C A S A+ +G+  H+  ++
Sbjct: 374 TIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLC-ATSEALAKGRMIHSWIVE 432

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY-AQHGHTKKALE 567
           + +   + + +A++ MY    + + AS VF+  + RD VSWN+MI  Y AQ   + +AL 
Sbjct: 433 SGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALL 492

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F++M+      D I+F+  ++AC     + EG+   D  + E  +   M   + ++++Y
Sbjct: 493 LFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHD-RIRETGLESNMTVANAVLNMY 551

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +++G L  A  +  +MP       W  +++A
Sbjct: 552 AKSGTLVLARKMFGKMPL-PDVISWNGMISA 581



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 246/502 (49%), Gaps = 17/502 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           ++ +L V+AD   +    +VH  + K+  +    + + L+ MY+    + DA+A FD M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-LRLAR 300
            +D++TW  ++  +       +A   F +M L G       FV+V+  C+   E L   R
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H  +    ++ DH + T L+  Y KC  +EDA K+F  +R  K VV W AMI+ + Q 
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRH-KRVVEWNAMITAYAQQ 179

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK-------SF 413
              + A+  F  M  EGV+    T+  +L A   +   +V A ++K   E+         
Sbjct: 180 DHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEV-AKLVKLCVEEREHDHLHDS 238

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           S  TAL+N Y   G L++A + F      +++  +AM+  Y Q    + A+++++ +  E
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLE 297

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           GVK +     +V+NAC+ P   +E+G+  H    + + +  +   +AL+ MY K G++E 
Sbjct: 298 GVKLDRIACMAVLNACSGPR-GLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEE 356

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A EVF+  + RD++SWN++I  + QH    +AL +   M+   ++ D I+F+  +  C  
Sbjct: 357 AVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAT 416

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
           +  + +G+     +V E  I   +   + ++D+Y      + A  +   M      + W 
Sbjct: 417 SEALAKGRMIHSWIV-ESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVS-WN 474

Query: 654 TVLAACRLISLQPHDSAIYVLL 675
            ++ A    + QP  S+  +LL
Sbjct: 475 AMITA---YAAQPRLSSEALLL 493


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 233/631 (36%), Positives = 377/631 (59%), Gaps = 45/631 (7%)

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
           NS      T  +H++  +    M L G  +    + +++  C   +  R  +++H+ ++K
Sbjct: 214 NSRTLSTFTTHIHLQ--QPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIK 271

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
                   +RT L+V Y+KC  + DA  +F  M E ++VVSWTAMIS + Q G    A+N
Sbjct: 272 TRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPE-RNVVSWTAMISAYSQRGYASQALN 330

Query: 369 FF---CQMTREGV------------------RPNGFTYSIILTAQPAVSPF----QVHAH 403
            F    +++  GV                   PN FT++ +LT+  +   F    Q+H+ 
Sbjct: 331 LFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSL 390

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           IIK NYE    VG++LL+ Y K G + EA  VFE + E+D+V+ +A+++GYAQ+G  E A
Sbjct: 391 IIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEA 450

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           ++++R+L  EG+K N  T++ V+ A +   AA++ GKQ H   +++++ + + + ++L+ 
Sbjct: 451 LELFRRLQGEGMKSNYVTYTGVLTALSG-LAALDLGKQVHNHVLRSEIPSFVVLQNSLID 509

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGI 582
           MYSK GN+  +  +F    +R ++SWN+M+ GY++HG  ++ L++F  MR +  ++ D +
Sbjct: 510 MYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSV 569

Query: 583 TFIGVITACTHAGLVDEGQQYF-DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           T + V++ C+H GL D+G   F D+   +  + P MEHY C+VDL  R+G +E+A + I 
Sbjct: 570 TILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIK 629

Query: 642 RMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQE 687
           +MPF  +A +W ++L ACR              L+ ++P ++  YV+LSN+YA+ G W++
Sbjct: 630 KMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWED 689

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
            + +R LM  + V KE G S IE+    ++F A D SHP+  +I  K++ELST  K+ GY
Sbjct: 690 VSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGY 749

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            PD S VL D+D+E KE IL  HSE+LA++FGL+A+PA  P++++KNLR+C DCH   K 
Sbjct: 750 VPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKY 809

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ISK+  R++ +RD NRFH    G CSC DYW
Sbjct: 810 ISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 161/317 (50%), Gaps = 23/317 (7%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH   +K+ +   V + T L+ LY + +++ D   VFD+M E NVVSWT+++S Y++
Sbjct: 262 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQ 321

Query: 157 NKMNDRVLELFH---RMQVEGI------------------KPNSFTFSTVLGVLADEGIV 195
                + L LF    ++ + G+                  +PN FTF+TVL         
Sbjct: 322 RGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGF 381

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
               Q+H+++IK   E    V ++L+ MY K   + +AR VF+ + +RD ++  ++++GY
Sbjct: 382 ILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGY 441

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
               L  EA E F  +   G +    T+  V+   +    L L +Q+H+ VL++ I    
Sbjct: 442 AQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFV 501

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            ++  L+  YSKCG +  + +IF  M E + V+SW AM+ G+ ++G     +  F  M  
Sbjct: 502 VLQNSLIDMYSKCGNLTYSRRIFDTMYE-RTVISWNAMLVGYSKHGEGREVLKLFTLMRE 560

Query: 376 E-GVRPNGFTYSIILTA 391
           E  V+P+  T   +L+ 
Sbjct: 561 ETKVKPDSVTILAVLSG 577



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 26/272 (9%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL------ 74
            Y+K D      ++FD  P+RN V +  ++  Y +     +ALNLF    ++ L      
Sbjct: 287 LYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAI 346

Query: 75  ----------PLFGS-----TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSL 119
                     P   +     T ++VL +C      + GRQ+H   +K  +   V V +SL
Sbjct: 347 DKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSL 406

Query: 120 VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
           +D+Y +   + + R VF+ + E +VVS T+++SGYA+  +++  LELF R+Q EG+K N 
Sbjct: 407 LDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNY 466

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            T++ VL  L+    +    QVH  V+++       + N+LI MY K   +  +R +FD 
Sbjct: 467 VTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDT 526

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           M +R  I+WN+M+ GY  +    E  + F  M
Sbjct: 527 MYERTVISWNAMLVGYSKHGEGREVLKLFTLM 558



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 6/169 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F+  P+R+ V    ++  Y +  L +EAL LF  ++  G+     T + VL     L
Sbjct: 420 RTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGL 479

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+QVH   ++S     V +  SL+D+Y +  N+   RR+FD M E  V+SW ++L
Sbjct: 480 AALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAML 539

Query: 152 SGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVL-----GVLADEGI 194
            GY+++     VL+LF  M+ E  +KP+S T   VL     G L D+G+
Sbjct: 540 VGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 588


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/672 (36%), Positives = 373/672 (55%), Gaps = 46/672 (6%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           +F  +   L     + T  ++HTM+         S+   L+  Y         R VFD M
Sbjct: 20  SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEM 79

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            DR+ + +N M+  YV N  + +    F  M   G      T+  V+K C+ ++ LR   
Sbjct: 80  SDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGL 139

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +H  VLK G+DF+  +  GL+  Y KCG + +A ++F  M   KDVVSW +M++G+  N
Sbjct: 140 LIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMI-WKDVVSWNSMVAGYAHN 198

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALL 420
              D A+    +M   G +P+G T + ++   PAV+          T+ E    V     
Sbjct: 199 MRFDDALEICREMEDYGQKPDGCTMASLM---PAVA---------NTSSENVLYV----- 241

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
                        K+F  ++ K++++W+ M+  Y +      AV +Y Q+    V+P+  
Sbjct: 242 ------------EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAI 289

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           TF+SV+ AC   SA +  G++ H    K KL   L + ++L+ MY++ G ++ A  VF R
Sbjct: 290 TFASVLPACGDLSALL-LGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDR 348

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
            + RD+ SW S+I  Y   G    A+ +F EM       D I F+ +++AC+H+GL+DEG
Sbjct: 349 MKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEG 408

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
           + YF  M +++ I P +EHY+C+VDL  RAG +++A +II +MP   +  VW T+L++CR
Sbjct: 409 RIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCR 468

Query: 661 --------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                         L+ L P  S  YVLLSN+YA  G W+E   +R +M  +K++K  G 
Sbjct: 469 VFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGI 528

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           S +E+ N+ ++FLAGD SHPQS +IY +L  L  ++K+ GY P+T   L D+++E KE  
Sbjct: 529 SNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGH 588

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           L+ HSE+LAI F L+ T     ++I KNLRVCGDCH   KLISK+  R+I+VRDTNRFHH
Sbjct: 589 LAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHH 647

Query: 827 FKEGLCSCGDYW 838
           FK+G+CSCGDYW
Sbjct: 648 FKDGVCSCGDYW 659



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 204/463 (44%), Gaps = 73/463 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD    RN V YN ++  Y  +  + + L +F  +   G      T   VLK C C 
Sbjct: 73  RKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCS 132

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +  +G  +H + +K G   ++ V   L+ +Y +   + + RRVFD+M   +VVSW S++
Sbjct: 133 ENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMV 192

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYA N   D  LE+   M+  G KP+  T ++++  +A+                    
Sbjct: 193 AGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVAN-------------------- 232

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             TS  N L               +F  +E ++ I+WN M+  Y+ N L  +A + +  M
Sbjct: 233 --TSSENVLY-----------VEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQM 279

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                E    TF SV+  C     L L R++H  V K  +  +  +   L+  Y++CG +
Sbjct: 280 EKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCL 339

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA ++F  M+  +DV SWT++IS +   G    AV  F +M   G  P+   +      
Sbjct: 340 DDAKRVFDRMK-FRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAF------ 392

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVA---- 446
                                     A+L+A    G+LDE    F ++ D+  I      
Sbjct: 393 -------------------------VAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEH 427

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           ++ ++    + G  + A  I +Q+    ++PNE  +++++++C
Sbjct: 428 YACLVDLLGRAGRVDEAYNIIKQMP---IEPNERVWATLLSSC 467


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 268/813 (32%), Positives = 433/813 (53%), Gaps = 96/813 (11%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDM--NESNVVSWTSLLSGYARNKMNDRVLELFH 168
           R++    +++   + ++ + D  ++FD+M     + VSWT+++SGY++N  + R  E F 
Sbjct: 72  RNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFS 131

Query: 169 RMQVE----GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
            M  +    G   + F+F++V+      G    A+Q+H +V K G  + T + N+++ MY
Sbjct: 132 LMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMY 191

Query: 225 LK-----------------------------SKMVRDARA--VFDGMEDRDSITWNSMVA 253
           +K                             S+M    +A  +F+ M +RD ++WN++++
Sbjct: 192 VKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLIS 251

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
            +  +   ++    F  M   G      T+ SV+  CA+T +L+    LH+++L+     
Sbjct: 252 IFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSL 311

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D     GL+  Y+KCG ++ A ++F  +RE  D +SW ++I+G +  G  + A+  F QM
Sbjct: 312 DLVFGNGLIDMYAKCGCLDLAKRVFKSLRE-HDHISWNSLITGVVHFGLGEDALILFNQM 370

Query: 374 TREGVRPNGFTYSIIL--TAQP--AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
            R  V  + F    IL   + P  A +   +H + IK+    S  VG A++  Y K G  
Sbjct: 371 RRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDT 430

Query: 430 DEAAKVFELID-------------------------------EKDIVAWSAMLAGYAQIG 458
           D+A  VF L+                                E++IV W++ML+ Y Q G
Sbjct: 431 DKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNG 490

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            +E  +K+Y  + S GV+P+  TF++ I AC A  A V+ G Q    + K  L+  + V+
Sbjct: 491 FSEEGLKLYVSMRSNGVQPDWITFTTSIRAC-ADLAIVKLGMQVVTHATKFGLSLNVSVA 549

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +++VTMYS+ G I+ A   F     +DL+SWN+M+  +AQ+G   K ++ F++M + + +
Sbjct: 550 NSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECK 609

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            + I+++ V++ C+H GLV EG+ YFD M     I PT EH+SCMVDL  RAG+LE+A D
Sbjct: 610 PNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKD 669

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           +I  MPF  +ATVW  +L +CR              L+ L    S  YVLLSNMY+ +G 
Sbjct: 670 LIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGE 729

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
               A +RKLM  + ++   G SWIEV N+ + F   + SHPQ  ++Y KLEE+   ++D
Sbjct: 730 LDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIED 789

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            G      Y+  +    H+      HSE+LA AFGL+  P+  P+ ++KNLRVC DCH V
Sbjct: 790 TG-----KYITVE-SSVHRSK--KYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLV 841

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           IKL+S +  R++++RD  RFHHFK+G+CSC DY
Sbjct: 842 IKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 147/620 (23%), Positives = 264/620 (42%), Gaps = 74/620 (11%)

Query: 32  QSLFDRSPQR--NFVEYNRLLFEYCRDSLHQEALNLF-LGIRRL---GLPLFGSTLSSVL 85
           + LFD  P R  + V +  ++  Y ++  H  +   F L IR     G      + +SV+
Sbjct: 94  EKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVM 153

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           K CG L D     Q+H    K GF  +  +  S+V +Y++  +V+    VF D+   ++ 
Sbjct: 154 KACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLF 213

Query: 146 SWTSLLSGYAR-----------NKMNDR--------------------VLELFHRMQVEG 174
            W S++ GY++           N+M +R                     L +F  M  +G
Sbjct: 214 CWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQG 273

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
             PN  T+ +VL   A    +     +H  +++    +     N LI MY K   +  A+
Sbjct: 274 FSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAK 333

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            VF  + + D I+WNS++ G V   L  +A   FN M  +   L      +++ +C+   
Sbjct: 334 RVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPD 393

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
                  LH   +K+G+     +   ++  Y+KCG  + A  +F +M  +++ +SWTAMI
Sbjct: 394 YASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLM-PLRNTISWTAMI 452

Query: 355 -------------------------------SGHLQNGAIDLAVNFFCQMTREGVRPN-- 381
                                          S ++QNG  +  +  +  M   GV+P+  
Sbjct: 453 TAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWI 512

Query: 382 GFTYSIILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
            FT SI   A  A+     QV  H  K     + SV  +++  Y + G++ EA   F+ I
Sbjct: 513 TFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSI 572

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           D+KD+++W+AMLA +AQ G     +  +  +     KPN  ++ SV++ C+      E  
Sbjct: 573 DDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGK 632

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
             F + +    ++      S +V +  + G +E A ++ +    K +   W++++     
Sbjct: 633 HYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRV 692

Query: 559 HGHTKKALEVFKEMRRQDLE 578
           H   + A    K++   D+E
Sbjct: 693 HHDLRLAETAAKKLMELDVE 712



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 245/564 (43%), Gaps = 107/564 (18%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN-------- 249
           A ++H  +I +G +    + N L+ MY    +  DA  VF     R+  TWN        
Sbjct: 27  ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86

Query: 250 -------------------------SMVAGYVTNELHMEAFETFNNM----GLAGAELTR 280
                                    +M++GY  N  H  +FETF+ M       G     
Sbjct: 87  SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME-------- 332
            +F SV+K C +  + RLA QLH+ V K G   +  I+  ++  Y KCG ++        
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206

Query: 333 -----------------------DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
                                   A +IF+ M E +D VSW  +IS   Q+G     +  
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPE-RDEVSWNTLISIFSQHGFGVQCLAM 265

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVK 425
           F +M  +G  PN  TY  +L+A  + S  +    +HA I++  +      G  L++ Y K
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAK 325

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G LD A +VF+ + E D ++W++++ G    G  E A+ ++ Q+    V  +EF   ++
Sbjct: 326 CGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTI 385

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK------ 539
           +  C+ P  A   G+  H  +IK+ + ++  V +A++TMY+K G+ + A  VF+      
Sbjct: 386 LGVCSGPDYA-STGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRN 444

Query: 540 -------------------------RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
                                       +R++V+WNSM+  Y Q+G +++ L+++  MR 
Sbjct: 445 TISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRS 504

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             ++ D ITF   I AC    +V  G Q       +  +   +   + +V +YSR G+++
Sbjct: 505 NGVQPDWITFTTSIRACADLAIVKLGMQVV-THATKFGLSLNVSVANSIVTMYSRCGLIK 563

Query: 635 KAMDIINRMPFAASATVWRTVLAA 658
           +A +  + +        W  +LAA
Sbjct: 564 EAKNTFDSID-DKDLISWNAMLAA 586



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/486 (24%), Positives = 219/486 (45%), Gaps = 43/486 (8%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K   +F+R P+R+ V +N L+  + +     + L +F+ +   G      T  SVL  C 
Sbjct: 230 KALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACA 289

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
              D  +G  +H   ++   + D+     L+D+Y +   ++  +RVF  + E + +SW S
Sbjct: 290 STSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNS 349

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L++G     + +  L LF++M+   +  + F   T+LGV +     +T   +H   IK+G
Sbjct: 350 LITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG 409

Query: 210 GEVVTSVCNALISMYLK-------------------------------SKMVRDARAVFD 238
                 V NA+I+MY K                               S  +  AR  FD
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFD 469

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M +R+ +TWNSM++ YV N    E  + + +M   G +    TF + I+ CA    ++L
Sbjct: 470 MMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKL 529

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             Q+ +   K G+  + ++   ++  YS+CG +++A   F  + + KD++SW AM++   
Sbjct: 530 GMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDD-KDLISWNAMLAAFA 588

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG-- 416
           QNG     ++ F  M +   +PN  +Y  +L+    +       H   +   + F +   
Sbjct: 589 QNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDS-MTRVFGISPT 647

Query: 417 ----TALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAG---YAQIGDTEGAVKIYR 468
               + +++   + G+L++A  + E +  K +   WSA+L     +  +   E A K   
Sbjct: 648 NEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLM 707

Query: 469 QLTSEG 474
           +L  EG
Sbjct: 708 ELDVEG 713



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 201/452 (44%), Gaps = 83/452 (18%)

Query: 283 FVSVIKLCA-TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG------------ 329
           F    K C+ T K   +AR+LH+Q++ +G+D    +   L+  YS CG            
Sbjct: 10  FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69

Query: 330 -------------------KMEDASKIFSMMR-EMKDVVSWTAMISGHLQNGAIDLAVNF 369
                              +M DA K+F  M   +KD VSWT MISG+ QNG    +   
Sbjct: 70  HHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFET 129

Query: 370 FCQMTRE----GVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLN 421
           F  M R+    G   + F+++ ++ A  ++       Q+HA + K  +     +  +++ 
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR------------- 468
            YVK G +D A  VF  I+   +  W++M+ GY+Q+     A++I+              
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249

Query: 469 ------------------QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
                             ++ ++G  PN  T+ SV++AC A ++ ++ G   HA  ++ +
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSAC-ASTSDLKWGAHLHARILRME 308

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            +  L   + L+ MY+K G ++ A  VFK  R+ D +SWNS+I G    G  + AL +F 
Sbjct: 309 HSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFN 368

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS----CMVDL 626
           +MRR  +  D      ++  C+       G+     +++ + I   M   +     ++ +
Sbjct: 369 QMRRSSVVLDEFILPTILGVCSGPDYASTGE-----LLHGYTIKSGMGSSAPVGNAIITM 423

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           Y++ G  +KA  +   MP   + + W  ++ A
Sbjct: 424 YAKCGDTDKADLVFRLMPLRNTIS-WTAMITA 454


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/620 (38%), Positives = 360/620 (58%), Gaps = 47/620 (7%)

Query: 234  RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
            R +FD +  ++ + +N M+  YV N L+ +A   F NM   G +    T+  V+K  + +
Sbjct: 1080 RHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS 1139

Query: 294  KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
            ++L +  Q+H+ V++ G+D +  +  GL+  Y KCG + +A ++   M   +DVVSW ++
Sbjct: 1140 EDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZM-PCRDVVSWNSL 1198

Query: 354  ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF 413
            ++G  +NG  D A+    +M   G++P+  T + +L   PAV+                 
Sbjct: 1199 VAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLL---PAVT----------------- 1238

Query: 414  SVGTALLN-AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
               T L N ++VK+        +F  +  K +V+W+ M+A Y        AV I+ Q+  
Sbjct: 1239 --NTCLDNVSFVKE--------MFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMED 1288

Query: 473  EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
              V P+  + +SV+ AC   SA +  G++ H   ++ +L   L + +AL+ MY+K G +E
Sbjct: 1289 HAVDPDAISIASVLPACGDLSALL-LGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 1347

Query: 533  SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
             A EVF + + RD+VSW SMI  Y  +G  + A+ +F  M+   L  D I F+ V++AC+
Sbjct: 1348 YAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACS 1407

Query: 593  HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
            HAGL+DEG+ YF +M  E  I P +EH+ CMVDL  RAG +++A   I +MP   +  VW
Sbjct: 1408 HAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVW 1467

Query: 653  RTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
              +L+ACR              L  L P  S  YVLLSN+YA  G W++   VR +M  +
Sbjct: 1468 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTK 1527

Query: 699  KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
             +KK  G S  E+ N+ ++FLAGD SHPQS QIY +L+ L  ++K+AGY P+T   L D+
Sbjct: 1528 GIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDV 1587

Query: 759  DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
            ++E KE  L+ HSE+LAIAF ++ T  G+P++I KNLRVCGDCH   KLISK+  R+I +
Sbjct: 1588 EEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITI 1647

Query: 819  RDTNRFHHFKEGLCSCGDYW 838
            RDTNRFHHF  G+CSCGDYW
Sbjct: 1648 RDTNRFHHFYNGVCSCGDYW 1667



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 206/461 (44%), Gaps = 73/461 (15%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            +FD  P++N V +N ++  Y  + L+ +AL +F  +   G+     T   VLK      D
Sbjct: 1082 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 1141

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
               G Q+H   V+ G   +V V   L+ +Y +   + +  RV D+M   +VVSW SL++G
Sbjct: 1142 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAG 1201

Query: 154  YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
             ARN   D  LE+   M++ G+KP++ T +++L                          V
Sbjct: 1202 CARNGQFDDALEVCKEMELLGLKPDAGTMASLL------------------------PAV 1237

Query: 214  TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            T+ C   +S           + +F  + ++  ++WN M+A Y+ N +  EA + F  M  
Sbjct: 1238 TNTCLDNVSF---------VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMED 1288

Query: 274  AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
               +    +  SV+  C     L L R++H  V++  +  +  +   L+  Y+KCG +E 
Sbjct: 1289 HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEY 1348

Query: 334  ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
            A ++F  M+  +DVVSWT+MIS +  NG    AV+ F +M   G+ P+   +        
Sbjct: 1349 AREVFDQMK-FRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAF-------- 1399

Query: 394  AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----DIVAWS 448
                                    ++L+A    G+LDE    F+L+ E+      I  + 
Sbjct: 1400 -----------------------VSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV 1436

Query: 449  AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             M+    + G  + A    +Q+  E   PNE  + ++++AC
Sbjct: 1437 CMVDLLGRAGQVDEAYGFIKQMPME---PNERVWGALLSAC 1474



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 214/467 (45%), Gaps = 53/467 (11%)

Query: 88   CGCLFDH----VFGRQVHCE-CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
            CG + D      + +++H + C+      + ++   L+  Y         R +FD++ + 
Sbjct: 1030 CGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKK 1089

Query: 143  NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
            NVV +  ++  Y  N +    L +F  M   GI P+ +T+  VL   +    +   +Q+H
Sbjct: 1090 NVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIH 1149

Query: 203  TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
              V++ G ++   V N LISMY K   + +A  V D M  RD ++WNS+VAG   N    
Sbjct: 1150 AAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFD 1209

Query: 263  EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            +A E    M L G +    T  S++     T             L N             
Sbjct: 1210 DALEVCKEMELLGLKPDAGTMASLLPAVTNT------------CLDN------------- 1244

Query: 323  VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
            V++ K        ++F M    K +VSW  MI+ ++ N     AV+ F QM    V P+ 
Sbjct: 1245 VSFVK--------EMF-MKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDA 1295

Query: 383  FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
             + + +L A   +S      ++H ++++   + +  +  AL++ Y K G L+ A +VF+ 
Sbjct: 1296 ISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQ 1355

Query: 439  IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
            +  +D+V+W++M++ Y   G    AV ++ ++   G+ P+   F SV++AC+  +  +++
Sbjct: 1356 MKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSH-AGLLDE 1414

Query: 499  GKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
            G+ +       C I  ++ + +C    +V +  + G ++ A    K+
Sbjct: 1415 GRYYFKLMTEECKIVPRIEHFVC----MVDLLGRAGQVDEAYGFIKQ 1457



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 171/391 (43%), Gaps = 54/391 (13%)

Query: 388  ILTAQPAVSPFQ-VHAHI-IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            IL   P +   + +H+ I I  +   + S+G  L+ AY   G       +F+ I +K++V
Sbjct: 1033 ILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVV 1092

Query: 446  AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
             ++ M+  Y        A+ +++ +   G+ P+ +T+  V+ A +  S  +  G Q HA 
Sbjct: 1093 FFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSG-SEDLWVGMQIHAA 1151

Query: 506  SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
             ++  L+  + V + L++MY K G +  A  V      RD+VSWNS++ G A++G    A
Sbjct: 1152 VVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDA 1211

Query: 566  LEVFKEMRRQDLEFDGITFIGVITACTHAGL--VDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            LEV KEM    L+ D  T   ++ A T+  L  V   ++ F  + N+     ++  ++ M
Sbjct: 1212 LEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANK-----SLVSWNVM 1266

Query: 624  VDLYSRAGMLEKAMDIINRMPFAA---SATVWRTVLAACRLIS----------------L 664
            + +Y    M  +A+DI  +M   A    A    +VL AC  +S                L
Sbjct: 1267 IAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRL 1326

Query: 665  QPHDSAIYVLLSN----MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
            QP+     +LL N    MYA  G  +    V   M  R V      SW  +         
Sbjct: 1327 QPN-----LLLENALIDMYAKCGCLEYAREVFDQMKFRDV-----VSWTSM--------- 1367

Query: 721  GDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
              IS    N        L +R++D G  PD+
Sbjct: 1368 --ISAYGMNGKGRDAVSLFSRMQDLGLNPDS 1396



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            + +F +   ++ V +N ++  Y  +S+  EA+++FL +    +     +++SVL  CG L
Sbjct: 1249 KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDL 1308

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               + GR++H   V+     ++ +  +L+D+Y +   +E  R VFD M   +VVSWTS++
Sbjct: 1309 SALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMI 1368

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            S Y  N      + LF RMQ  G+ P+S  F +VL   +  G++
Sbjct: 1369 SAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLL 1412


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 264/802 (32%), Positives = 422/802 (52%), Gaps = 24/802 (2%)

Query: 54  CRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDV 113
           C +   +EA+ L   ++ L + +      ++++ C        G +V+   + S  +  V
Sbjct: 70  CANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGV 129

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QV 172
            +  + + +++R  N+ D   VF  M+E N+ SW  L+ GYA+    D  + L+HRM  V
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G+KP+ +TF  VL        +A   +VH  V++ G E+   V NALI+MY+K   V+ 
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR +FD M  RD I+WN+M++GY  N +  E  E F  M     +    T  SVI  C  
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             + RL R +H+ V+  G   D ++   L   Y   G   +A K+FS M E KD+VSWT 
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDIVSWTT 368

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
           MISG+  N   D A++ +  M ++ V+P+  T + +L+A   +       ++H   IK  
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                 V   L+N Y K   +D+A  +F  I  K++++W++++AG         A+   R
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+    ++PN  T ++ + A  A   A+  GK+ HA  ++  +     + +AL+ MY + 
Sbjct: 489 QMKMT-LQPNAITLTAALAA-CARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC 546

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G + +A   F  Q+K D+ SWN ++ GY++ G     +E+F  M +  +  D ITFI ++
Sbjct: 547 GRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLL 605

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
             C+ + +V +G  YF  M  ++ + P ++HY+C+VDL  RAG L++A   I +MP    
Sbjct: 606 CGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
             VW  +L ACR+                L       Y+LL N+YA  G W+E A+VR++
Sbjct: 665 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 724

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M +  +  +AG SW+EVK K ++FL+ D  HPQ+ +I + LE    ++ + G    +   
Sbjct: 725 MKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESS 784

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
             D  +  ++ I   HSER AIAFGL+ T  G P+ + KNL +C +CH  +K ISK  RR
Sbjct: 785 SMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRR 844

Query: 815 DIVVRDTNRFHHFKEGLCSCGD 836
           +I VRD   FHHFK+G CSCGD
Sbjct: 845 EISVRDAEHFHHFKDGECSCGD 866


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/658 (35%), Positives = 386/658 (58%), Gaps = 21/658 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  +I +G    T + N+L++ Y+   ++ DA+ +F     ++ ++W  +++G   N+
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKND 101

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
             +EA + F  M +   +    T  SV+   A    +R+A+ +H   ++ G + +  + T
Sbjct: 102 CFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YSK G M  A ++F  M E ++VVSW A++SG+  +G  + A++ F  M R+G+ 
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSE-RNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 380 PNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            + +T   ++ A  +V   QV    H  II+T YE    + TAL++ YV    +D+A +V
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY-RQLTSEGVKPNEFTFSSVINACTAPSA 494
           F  +  KD+ AW+ ML G++     + A+K + + L  + +K +      ++++C+  S 
Sbjct: 281 FSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSH-SG 339

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A++QG++ HA +IK    N + V SA++ MY+  GN+E A   F    ++D+V WN+MI 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           G   +G+   A+++F +M+   L+ D  TF+ V+ AC+HAG+V EG Q F  MV   H  
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDI 459

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL------------- 661
           P ++HY+C++D+  RAG L+ A   IN MPF     V+ T+L ACR+             
Sbjct: 460 PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQK 519

Query: 662 -ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
              ++P+D+  YVLLSNMYA  G+W+     R  +  +++KK+ G+S IE+  + Y+F+A
Sbjct: 520 IFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMA 579

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           G+  HPQ  +I   L+ L  ++K AGY P+T+ +LQD+ D+ K+ IL  HSE++AIAFGL
Sbjct: 580 GEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGL 639

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + T  G  ++I KNLR C DCH+  K +SK+  R +V++D NRFH F++G+CSC DYW
Sbjct: 640 MRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 252/483 (52%), Gaps = 11/483 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +Q+H + + SG   +  +S SL++ Y+    + D +++F      NVVSWT L+SG A+N
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 +++F  M +   KPN+ T S+VL   A+ G++  A  VH   ++ G E    V 
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            AL+ MY K   +  AR +F+ M +R+ ++WN++V+GY  +    EA + FN M   G  
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T +S+I    +   L++   +H  +++ G + D +I+T LM  Y     ++DA ++
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVS 396
           FS M  +KDV +WT M++G       D A+  F +M   + ++ +      IL++     
Sbjct: 281 FSEMF-VKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSG 339

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             Q    VHA  IKT +  +  VG+A+++ Y   G L++A + F  + EKD+V W+AM+A
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ--FHACSIKAK 510
           G    G    A+ ++ Q+   G+ P+E TF SV+ AC+  +  V +G Q  +H       
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSH-AGMVYEGLQIFYHMVKTSHD 458

Query: 511 LNNALCVSSALVTMYSKKGNIESA-SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
           + N L   + ++ +  + G +++A S +     + D   +++++     HG+ K   E+ 
Sbjct: 459 IPN-LQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEIS 517

Query: 570 KEM 572
           +++
Sbjct: 518 QKI 520



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 196/386 (50%), Gaps = 10/386 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F  +P +N V +  L+    ++    EA+++F  +          T+SSVL     L
Sbjct: 76  KQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANL 135

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 + VHC  V+ GF  +V V T+LVD+Y +   +   R++F+ M+E NVVSW +++
Sbjct: 136 GLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIV 195

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY+ +  ++  ++LF+ M+ +G+  + +T  +++      G +     +H  +I+ G E
Sbjct: 196 SGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYE 255

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  AL+ +Y+    V DA  VF  M  +D   W  M+ G+ +      A + FN M
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315

Query: 272 -GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV--AYSKC 328
            G+   +L     + ++  C+ +  L+  R++H+  +K    F +NI  G  V   Y+ C
Sbjct: 316 LGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTC--FANNIFVGSAVIDMYANC 373

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +EDA + F  M E KDVV W AMI+G+  NG    A++ F QM   G+ P+  T+  +
Sbjct: 374 GNLEDAKRFFYGMGE-KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSV 432

Query: 389 LTAQP----AVSPFQVHAHIIKTNYE 410
           L A           Q+  H++KT+++
Sbjct: 433 LYACSHAGMVYEGLQIFYHMVKTSHD 458



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 192/351 (54%), Gaps = 14/351 (3%)

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           K+L+  +Q+H+Q++ +G+  +  +   LM AY  CG + DA +IF      K+VVSWT +
Sbjct: 35  KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFH-HTPCKNVVSWTIL 93

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY 409
           ISG  +N     A++ F +MT    +PN  T S +L A   +   +    VH   ++  +
Sbjct: 94  ISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           E +  V TAL++ Y K G +  A ++FE + E+++V+W+A+++GY+  G +E A+ ++  
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +  +G+  + +T  S+I A +     ++ G   H   I+    N   + +AL+ +Y    
Sbjct: 214 MRRKGLLVDFYTIMSLIPA-SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-QDLEFDGITFIGVI 588
            ++ A  VF     +D+ +W  M+ G++   H  +A++ F +M   Q+L+ D I  +G++
Sbjct: 273 CVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGIL 332

Query: 589 TACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++C+H+G + +G++   + +     ++I+      S ++D+Y+  G LE A
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVG----SAVIDMYANCGNLEDA 379



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 63  LNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDL 122
            N  LGI+ L L      L  +L +C        GR+VH   +K+ FA ++ V ++++D+
Sbjct: 312 FNKMLGIQNLKLD--SIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDM 369

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           Y    N+ED +R F  M E +VV W ++++G   N      ++LF +M+  G+ P+  TF
Sbjct: 370 YANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTF 429

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            +VL   +  G+V   +Q+   ++K   ++
Sbjct: 430 VSVLYACSHAGMVYEGLQIFYHMVKTSHDI 459



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 7/147 (4%)

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           +Q HA  I + L +   +S++L+  Y   G +  A ++F     +++VSW  +I G A++
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPT 616
               +A++VF+EM   + + + +T   V+ A  + GL+   +      V    E +++  
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRM 643
               + +VD+YS+ G +  A  +   M
Sbjct: 161 ----TALVDMYSKFGCMGVARQLFESM 183


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/761 (33%), Positives = 393/761 (51%), Gaps = 123/761 (16%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--------------- 242
           A  VH  +I  G +    + N LI +Y KS  +  AR +FD + +               
Sbjct: 33  ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92

Query: 243 ------------------RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
                             RD++ +N+M+ G+  N     A   F  M   G +    TF 
Sbjct: 93  SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152

Query: 285 SVIK-LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK----MEDASKIFS 339
           SV+  L     + +   Q H+  LK+G  +  ++   L+  YSKC      +  A K+F 
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDL--------------------------------AV 367
            + E KD  SWT M++G+++NG  DL                                A+
Sbjct: 213 EILE-KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAY 423
               +M   G+  + FTY  ++ A       Q    VHA++++   + SF    +L++ Y
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLY 330

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGY----------------------------- 454
            K G  DEA  +FE +  KD+V+W+A+L+GY                             
Sbjct: 331 YKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390

Query: 455 --AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
             A+ G  E  +K++  +  EG +P ++ FS  I +C A   A   G+Q+HA  +K   +
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC-AVLGAYCNGQQYHAQLLKIGFD 449

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           ++L   +AL+TMY+K G +E A +VF+     D VSWN++I    QHGH  +A++V++EM
Sbjct: 450 SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM 509

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
            ++ +  D IT + V+TAC+HAGLVD+G++YFD M   + I P  +HY+ ++DL  R+G 
Sbjct: 510 LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGK 569

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNM 678
              A  +I  +PF  +A +W  +L+ CR              L  L P     Y+LLSNM
Sbjct: 570 FSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNM 629

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           +AATG W+E ARVRKLM DR VKKE   SWIE++ + ++FL  D SHP++  +Y  L++L
Sbjct: 630 HAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689

Query: 739 STRLKDAGYKPDTSYVLQDID-DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
              ++  GY PDTS+VL D++ D HKE +L+ HSE++A+AFGL+  P G  ++I KNLR 
Sbjct: 690 GKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRT 749

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCH   + +S + +RDI++RD  RFHHF+ G CSCG++W
Sbjct: 750 CGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 169/650 (26%), Positives = 287/650 (44%), Gaps = 148/650 (22%)

Query: 71  RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE 130
           RL LPL  ++L                R VH   +  GF    ++   L+D+Y +++ + 
Sbjct: 20  RLCLPLRRTSLQ-------------LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELN 66

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNK---------------MNDRVL----------- 164
             R++FD+++E + ++ T+++SGY  +                M D V+           
Sbjct: 67  YARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHN 126

Query: 165 -------ELFHRMQVEGIKPNSFTFSTVLGVLA----DEGIVATAVQVHTMVIKNGGEVV 213
                   LF +M+ EG KP++FTF++VL  LA    DE      VQ H   +K+G   +
Sbjct: 127 NDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDE---KQCVQFHAAALKSGAGYI 183

Query: 214 TSVCNALISMYLK----SKMVRDARAVFDGMEDRDSITW--------------------- 248
           TSV NAL+S+Y K      ++  AR VFD + ++D  +W                     
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243

Query: 249 -----------NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
                      N+M++GYV    + EA E    M  +G EL   T+ SVI+ CAT   L+
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM---------------- 341
           L +Q+H+ VL+   DF  +    L+  Y KCGK ++A  IF  M                
Sbjct: 304 LGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYV 362

Query: 342 ------------REMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
                       +EMK+  ++SW  MISG  +NG  +  +  F  M REG  P  + +S 
Sbjct: 363 SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            + +   +  +    Q HA ++K  ++ S S G AL+  Y K G+++EA +VF  +   D
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 482

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-F 502
            V+W+A++A   Q G    AV +Y ++  +G++P+  T  +V+ AC+  +  V+QG++ F
Sbjct: 483 SVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH-AGLVDQGRKYF 541

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGH 561
            +     ++       + L+ +  + G    A  V +    +     W +++ G   HG+
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
            +                     +G+I A    GL+ E    + ++ N H
Sbjct: 602 ME---------------------LGIIAADKLFGLIPEHDGTYMLLSNMH 630



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 213/482 (44%), Gaps = 110/482 (22%)

Query: 283 FVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           + + ++LC   +   L+LAR +H  ++  G     +I   L+  Y K  ++  A ++F  
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74

Query: 341 MRE--------------------------------MKDVVSWTAMISGHLQNGAIDLAVN 368
           + E                                M+D V + AMI+G   N     A+N
Sbjct: 75  ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSP-----FQVHAHIIKTNYEKSFSVGTALLNAY 423
            FC+M  EG +P+ FT++ +L     V+       Q HA  +K+      SV  AL++ Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194

Query: 424 VK----KGILDEAAKVFELIDEKD--------------------------------IVAW 447
            K      +L  A KVF+ I EKD                                +VA+
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AM++GY   G  + A+++ R++ S G++ +EFT+ SVI AC A +  ++ GKQ HA  +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC-ATAGLLQLGKQVHAYVL 313

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           + + + +    ++LV++Y K G  + A  +F++   +DLVSWN+++ GY   GH  +A  
Sbjct: 314 R-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372

Query: 568 VFKE-------------------------------MRRQDLEFDGITFIGVITACTHAGL 596
           +FKE                               M+R+  E     F G I +C   G 
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
              GQQY   ++ +     ++   + ++ +Y++ G++E+A  +   MP   S + W  ++
Sbjct: 433 YCNGQQYHAQLL-KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALI 490

Query: 657 AA 658
           AA
Sbjct: 491 AA 492



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 226/513 (44%), Gaps = 92/513 (17%)

Query: 32  QSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + +F+++P   R+ V YN ++  +  ++    A+NLF  ++  G      T +SVL    
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159

Query: 90  CLF-DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN----VEDGRRVFDDMNESNV 144
            +  D     Q H   +KSG     +VS +LV +Y +  +    +   R+VFD++ E + 
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219

Query: 145 VSWTSLLSGYARN-----------KMNDRV---------------------LELFHRMQV 172
            SWT++++GY +N            M+D +                     LE+  RM  
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            GI+ + FT+ +V+   A  G++    QVH  V++   +      N+L+S+Y K     +
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDE 338

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVT-------------------------------NELH 261
           ARA+F+ M  +D ++WN++++GYV+                               N   
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            E  + F+ M   G E     F   IK CA        +Q H+Q+LK G D   +    L
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNAL 458

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+KCG +E+A ++F  M  + D VSW A+I+   Q+G    AV+ + +M ++G+RP+
Sbjct: 459 ITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517

Query: 382 GFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------------LLNAYVKKGIL 429
             T   +LTA         HA ++    +   S+ T             L++   + G  
Sbjct: 518 RITLLTVLTACS-------HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKF 570

Query: 430 DEAAKVFELIDEKDIVA-WSAMLAGYAQIGDTE 461
            +A  V E +  K     W A+L+G    G+ E
Sbjct: 571 SDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 155/358 (43%), Gaps = 35/358 (9%)

Query: 43  FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHC 102
            V YN ++  Y     +QEAL +   +   G+ L   T  SV++ C        G+QVH 
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310

Query: 103 ---------------------ECVKSGFAR---------DVNVSTSLVDLYMRTNNVEDG 132
                                +C K   AR         D+    +L+  Y+ + ++ + 
Sbjct: 311 YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           + +F +M E N++SW  ++SG A N   +  L+LF  M+ EG +P  + FS  +   A  
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           G      Q H  ++K G +   S  NALI+MY K  +V +AR VF  M   DS++WN+++
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ---VLKN 309
           A    +    EA + +  M   G    R T ++V+  C+    +   R+       V + 
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRI 550

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
               DH  R  L+    + GK  DA  +   +        W A++SG   +G ++L +
Sbjct: 551 PPGADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/715 (35%), Positives = 376/715 (52%), Gaps = 98/715 (13%)

Query: 220 LISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           LI+ Y     +   R +F+G  +  RDS+ +N+M+ GY  N     A E F  M      
Sbjct: 85  LITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFR 144

Query: 278 LTRSTFVSVIK-LCATTKELRLARQLHSQVLKNGID-FDHNIRTGLMVAYSK-------- 327
               TF SV+  L       +   Q+H  V+K G+     ++   L+  Y K        
Sbjct: 145 PDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIS 204

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE----------- 376
           C  M  A K+F  M + +D ++WT MI+G+++N  ++ A   F  M              
Sbjct: 205 CSAMVSARKLFDEMPK-RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISG 263

Query: 377 --------------------GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKT----N 408
                               G++ +  TY+ I++A   V  FQ    VHA+I+K     N
Sbjct: 264 YVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPN 323

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA----- 463
           +    SV  AL+  Y K   +DEA K+F  +  ++I+ W+A+L+GY   G  E A     
Sbjct: 324 HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFE 383

Query: 464 --------------------------VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
                                     +K+++Q+  +G +P +F F+  + AC+    A+E
Sbjct: 384 EMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV-LGALE 442

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G+Q HA  +     ++L V +A+++MY+K G +E+A  VF      DLVSWNSMI    
Sbjct: 443 NGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALG 502

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           QHGH  KA+E+F +M ++ +  D ITF+ V+TAC+HAGLV++G+ YF+ M+  + I P  
Sbjct: 503 QHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCE 562

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LIS 663
           +HY+ MVDL+ RAGM   A  +I+ MP    A VW  +LA CR              L  
Sbjct: 563 DHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFK 622

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           L P +   YVLLSN+YA  G W E A+VRKLM D+ V+KE   SWIEV+NK + F+  D 
Sbjct: 623 LMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDD 682

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
            HP+   +Y  LE+L   +K  GY PDT +VL D++ E KE  LS HSE+LA+ FG++  
Sbjct: 683 VHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKL 742

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P GA +++ KN+R+CGDCH   K +SK+ RR+I+VRD  RFHHFK G CSC DYW
Sbjct: 743 PPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 221/533 (41%), Gaps = 105/533 (19%)

Query: 32  QSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVL---- 85
           + +F+ +P   R+ V YN ++  Y  +     AL LF  +RR        T +SVL    
Sbjct: 99  REIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV 158

Query: 86  ------KTCGCLFDHVFGRQVHCECVKSGFA----------------------------- 110
                 + CG         Q+HC  VK+G                               
Sbjct: 159 LFVGNEQQCG---------QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMV 209

Query: 111 -----------RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
                      RD    T+++  Y+R +++   R VF+ M E+   +W +++SGY     
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN----GGEVVTS 215
               L L  +M+  GI+ +  T++T++   A+ G      QVH  ++KN          S
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLS 329

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT------------------ 257
           V NALI++Y K+  V +AR +F  M  R+ ITWN++++GYV                   
Sbjct: 330 VSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKN 389

Query: 258 -------------NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
                        N    E  + F  M L G E     F   +  C+    L   RQLH+
Sbjct: 390 LLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHA 449

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           Q++  G +   ++   ++  Y+KCG +E A  +F  M  + D+VSW +MI+   Q+G   
Sbjct: 450 QLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSV-DLVSWNSMIAALGQHGHGV 508

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------ 418
            A+  F QM +EGV P+  T+  +LTA       +   H   +  E S+ +         
Sbjct: 509 KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE-SYGITPCEDHYAR 567

Query: 419 LLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           +++ + + G+   A  V + +  K     W A+LAG    G+ +  ++   QL
Sbjct: 568 MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQL 620


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/658 (35%), Positives = 386/658 (58%), Gaps = 21/658 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  +I +G    T + N+L++ Y+   ++ DA+ +F     ++ ++W  +++G   N+
Sbjct: 42  QIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKND 101

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
             +EA + F  M +   +    T  SV+   A    +R+A+ +H   ++ G + +  + T
Sbjct: 102 CFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVET 161

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YSK G M  A ++F  M E ++VV+W A++SG+  +G  + A++ F  M R+G+ 
Sbjct: 162 ALVDMYSKFGCMGVARQLFESMSE-RNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 380 PNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            + +T   ++ A  +V   QV    H  II+T YE    + TAL++ YV    +D+A +V
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY-RQLTSEGVKPNEFTFSSVINACTAPSA 494
           F  +  KD+ AW+ ML G++     + A+K + + L  + +K +      ++++C+  S 
Sbjct: 281 FSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSH-SG 339

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A++QG++ HA +IK    N + V SA++ MY+  GN+E A   F    ++D+V WN+MI 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           G   +G+   A+++F +M+   L+ D  TF+ V+ AC+HAG+V EG Q F  MV   H+ 
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVI 459

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL------------- 661
           P ++HY+C++D+  RAG L+ A   IN MPF     V+ T+L ACR+             
Sbjct: 460 PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQK 519

Query: 662 -ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
              ++P+D+  YVLLSNMYA  G+W+     R  +  +++KK+ G+S IE+  + Y+F+A
Sbjct: 520 IFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMA 579

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           G+  HPQ  +I   L+ L  ++K AGY P+T+ +LQD+ D+ K+ IL  HSE++AIAFGL
Sbjct: 580 GEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGL 639

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + T     ++I KNLR C DCHT  K +SK+  R +V++D NRFH F++G+CSC DYW
Sbjct: 640 MRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 249/481 (51%), Gaps = 7/481 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +Q+H + + SG   +  +S SL++ Y+    + D +++F      NVVSWT L+SG A+N
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 +++F  M +   KPN+ T S+VL   A+ G++  A  VH   ++ G E    V 
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            AL+ MY K   +  AR +F+ M +R+ +TWN++V+GY  +    EA + FN M   G  
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T +S+I    +   L++   +H  +++ G + D +I+T LM  Y     ++DA ++
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVS 396
           FS M  +KDV +WT M++G       D A+  F +M   + ++ +      IL++     
Sbjct: 281 FSEM-SVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSG 339

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             Q    VHA  IKT +  +  VG+A+++ Y   G L++A + F  + EKD+V W+AM+A
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G    G    A+ ++ Q+   G+ P+E TF SV+ AC+      E  + F+     + + 
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVI 459

Query: 513 NALCVSSALVTMYSKKGNIESA-SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
             L   + ++ +  + G +++A S +     + D   +++++     HG+ K   E+ ++
Sbjct: 460 PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQK 519

Query: 572 M 572
           +
Sbjct: 520 I 520



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 195/385 (50%), Gaps = 10/385 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F  +P +N V +  L+    ++    EA+++F  +          T+SSVL     L
Sbjct: 76  KQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANL 135

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 + VHC  V+ GF  +V V T+LVD+Y +   +   R++F+ M+E NVV+W +++
Sbjct: 136 GLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIV 195

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY+ +  ++  ++LF+ M+ +G+  + +T  +++      G +     +H  +I+ G E
Sbjct: 196 SGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYE 255

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  AL+ +Y+    V DA  VF  M  +D   W  M+ G+ +      A + FN M
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315

Query: 272 -GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV--AYSKC 328
            G+   +L     + ++  C+ +  L+  R++H+  +K    F +NI  G  V   Y+ C
Sbjct: 316 LGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTC--FANNIFVGSAVIDMYANC 373

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +EDA + F  M E KDVV W AMI+G+  NG    A++ F QM   G+ P+  T+  +
Sbjct: 374 GNLEDAKRFFYGMGE-KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSV 432

Query: 389 LTAQP----AVSPFQVHAHIIKTNY 409
           L A           Q+  H++KT++
Sbjct: 433 LYACSHAGMVYEGLQIFYHMVKTSH 457



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 190/351 (54%), Gaps = 14/351 (3%)

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           K+L+  +Q+H+Q++ +G+  +  +   LM AY  CG + DA +IF      K+VVSWT +
Sbjct: 35  KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFH-HTPYKNVVSWTIL 93

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY 409
           ISG  +N     A++ F +M     +PN  T S +L A   +   +    VH   ++  +
Sbjct: 94  ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           E +  V TAL++ Y K G +  A ++FE + E+++V W+A+++GY+  G +E A+ ++  
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +  +G+  + +T  S+I A +     ++ G   H   I+    N   + +AL+ +Y    
Sbjct: 214 MRRKGLLVDFYTIMSLIPA-SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-QDLEFDGITFIGVI 588
            ++ A  VF     +D+ +W  M+ G++   H  +A++ F +M   Q+L+ D I  +G++
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332

Query: 589 TACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++C+H+G + +G++   + +     ++I+      S ++D+Y+  G LE A
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVG----SAVIDMYANCGNLEDA 379



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 8/162 (4%)

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           +Q HA  I + L +   +S++L+  Y   G +  A ++F     +++VSW  +I G A++
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPT 616
               +A++VF+EM   + + + +T   V+ A  + GL+   +      V    E +++  
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
               + +VD+YS+ G +  A  +   M    +   W  +++ 
Sbjct: 161 ----TALVDMYSKFGCMGVARQLFESMS-ERNVVTWNAIVSG 197


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/588 (38%), Positives = 352/588 (59%), Gaps = 21/588 (3%)

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           N  LA +        S+++ C  +  LR  RQLH ++L +G+  D  + T L+  Y+ CG
Sbjct: 52  NPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACG 111

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++  A ++F  M + ++V  W  +I  + + G  + AV  +  M   GV P+ FTY ++L
Sbjct: 112 QVGHARRLFDGMPK-RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVL 170

Query: 390 TAQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A  A+    +  +VH  +  T + +   V   +++ Y K G +D+A  VF+ I  +D V
Sbjct: 171 KACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAV 230

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W++M+A Y Q G    A+ + R + + G+ P   T  S ++A    +AA+ +G++ H  
Sbjct: 231 VWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAAD-AAALPRGRELHGF 289

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
             +        + ++LV MY+K G ++ A  +F++  KR+LVSWN+MICGY  HGH  +A
Sbjct: 290 GWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEA 349

Query: 566 LEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           L +F +M+    +  D ITF+GV++AC H G+V+E +++F +MVN + I PT++HY+C++
Sbjct: 350 LALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVI 409

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           D+    G  E+A D+I  M     + +W  +L  C+              LI L+P D+ 
Sbjct: 410 DVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAG 469

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YV LSN+YA +G W++ ARVRKLM +R +KK    SWIE+K KT+ FL GD SHP+S++
Sbjct: 470 NYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDE 529

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           IY +LE L   + DAGY PD   V  ++DD+ K  ++  HSERLAIAFGL++TP G  L 
Sbjct: 530 IYGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLL 589

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + KNLRVC DCH VIKLIS++ +R+I++RD NR+HHF  G CSC DYW
Sbjct: 590 VTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 200/440 (45%), Gaps = 50/440 (11%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +S+L++C        GRQ+H   + SG   D  +ST LVDLY     V   RR+FD M +
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            NV  W  L+  YAR    +  + L+  M   G++P++FT+  VL   A    + T  +V
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  V          VC  ++ MY K   V DARAVFDG+  RD++ WNSM+A Y  N   
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           MEA     +M   G   T +T VS +   A    L   R+LH    + G      ++T L
Sbjct: 246 MEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSL 305

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRP 380
           +  Y+K G ++ A  +F  + + +++VSW AMI G+  +G  D A+  F +M  +  V P
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMK-RELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTP 364

Query: 381 NGFTYSIILTA-------QPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           +  T+  +L+A       + A   F   V+A+ IK   +      T +++     G  +E
Sbjct: 365 DNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHY----TCVIDVLGHTGRFEE 420

Query: 432 AAKVFELID-EKDIVAWSAMLAG----------------------------------YAQ 456
           A  + + +  E D   W A+L G                                  YAQ
Sbjct: 421 AYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQ 480

Query: 457 IGDTEGAVKIYRQLTSEGVK 476
            G  E A ++ + +T+ G+K
Sbjct: 481 SGKWEKAARVRKLMTNRGLK 500



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 151/328 (46%), Gaps = 4/328 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+RN   +N L+  Y R+   + A+ L+ G+   G+     T   VLK C  L
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAAL 176

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR+VH     + + +DV V   +VD+Y +   V+D R VFD +   + V W S++
Sbjct: 177 LDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMI 236

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + Y +N      L L   M   GI P   T  + +   AD   +    ++H    + G  
Sbjct: 237 AAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFG 296

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   +  +L+ MY KS  V+ AR +F+ +  R+ ++WN+M+ GY  +    EA   FN M
Sbjct: 297 LQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKM 356

Query: 272 -GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKC 328
            G A       TFV V+  C     +  A++    ++ N       ++  T ++      
Sbjct: 357 KGDAQVTPDNITFVGVLSACNHGGMVEEAKEFF-YLMVNAYSIKPTVQHYTCVIDVLGHT 415

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISG 356
           G+ E+A  +   M    D   W A+++G
Sbjct: 416 GRFEEAYDLIKGMSIEPDSGIWGALLNG 443


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/640 (36%), Positives = 375/640 (58%), Gaps = 22/640 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+LI++Y+K   V  AR +FD M  R+ ++W++++AGY+ N   +E FE F  M +    
Sbjct: 61  NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKM-VVKDN 119

Query: 278 LTRSTFVSVIKLCATTKELRL-ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +  + +V    + +   ++ +  +Q H   LK+G++F   ++  L+  YSKC  +  A +
Sbjct: 120 IFPNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           I   +    D+  +  +++G LQ+  +  AV+    +  EG+  N  TY  I     ++ 
Sbjct: 180 ILYTV-PGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLK 238

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 QVHA ++K++ +    +G+++++ Y K G +      F+ +  +++V+W++++A
Sbjct: 239 DITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIA 298

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            Y Q    E A+ ++ ++  + + PNE+T + + N+    SA    G Q HA + K+ L 
Sbjct: 299 AYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALC-LGDQLHARAEKSGLK 357

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             + V +AL+ MY K G+I +A  VF      ++++WN++I G++ HG  K+AL +F++M
Sbjct: 358 GNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDM 417

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
                  + +TFIGVI AC H  LVDEG  YF+ ++ +  I P +EHY+C+V L SR+G 
Sbjct: 418 MATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGR 477

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNM 678
           L++A + +           WRT+L AC               L+ L+P D   Y+LLSNM
Sbjct: 478 LDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNM 537

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           +A    W     +RKLM +R VKKE G SW+E++N  + F + DI HP++N IY  +++L
Sbjct: 538 HARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDL 597

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
            ++++  GY PD   VL DI+DE K   LS HSE+LA+A+GL+ TP+GAP+ ++KNLR+C
Sbjct: 598 LSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMC 657

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            DCHT IKLISK+  R IVVRD NRFHHF+ G CSCGDYW
Sbjct: 658 DDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 247/482 (51%), Gaps = 11/482 (2%)

Query: 96  FGRQVHCE-CVKSGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           FGR +H    + +   RD  VN   SL++LY++ + V   R++FD M   NVVSW++L++
Sbjct: 37  FGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMA 96

Query: 153 GYARNKMNDRVLELFHRMQV-EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           GY +N     V ELF +M V + I PN +  +T +    D  +     Q H   +K+G E
Sbjct: 97  GYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISS-CDSQMYVEGKQCHGYALKSGLE 155

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NALI +Y K   V  A  +   +   D   +N +V G + +    EA +    +
Sbjct: 156 FHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLI 215

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G E   +T+V++ +LCA+ K++ L +Q+H+Q+LK+ ID D  I + ++  Y KCG +
Sbjct: 216 ISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNV 275

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
                 F  ++  ++VVSWT++I+ + QN   + A+N F +M  + + PN +T +++  +
Sbjct: 276 LSGRTFFDRLQS-RNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNS 334

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +S      Q+HA   K+  + +  VG AL+  Y K G +  A  VF  +   +I+ W
Sbjct: 335 AAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITW 394

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +A++ G++  G  + A+ +++ + + G +PN  TF  VI AC       E    F+    
Sbjct: 395 NAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMK 454

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFK-RQRKRDLVSWNSMICGYAQHGHTKKAL 566
           + ++   L   + +V + S+ G ++ A    +  Q   D+VSW +++     H H  K  
Sbjct: 455 QFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGR 514

Query: 567 EV 568
           ++
Sbjct: 515 KI 516



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 161/323 (49%), Gaps = 9/323 (2%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P  +   YN ++    + +   EA+++   I   G+    +T  ++ + C  L D   G+
Sbjct: 185 PGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGK 244

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           QVH + +KS    DV + +S++D+Y +  NV  GR  FD +   NVVSWTS+++ Y +N+
Sbjct: 245 QVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNE 304

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
             +  L LF +M+++ I PN +T + +    A    +    Q+H    K+G +    V N
Sbjct: 305 FFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGN 364

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI MY KS  +  A++VF  M   + ITWN+++ G+  + L  EA   F +M   G   
Sbjct: 365 ALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERP 424

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKN-----GIDFDHNIRTGLMVAYSKCGKMED 333
              TF+ VI  CA  K +       + ++K      G++  +    GL+   S+ G++++
Sbjct: 425 NYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLE-HYTCIVGLL---SRSGRLDE 480

Query: 334 ASKIFSMMREMKDVVSWTAMISG 356
           A       +   DVVSW  +++ 
Sbjct: 481 AENFMRSHQINWDVVSWRTLLNA 503



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 204/453 (45%), Gaps = 19/453 (4%)

Query: 7   LKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF 66
           L SLIN   K    S+         + LFD  P+RN V ++ L+  Y ++    E   LF
Sbjct: 60  LNSLINLYVKCDEVSIA--------RKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELF 111

Query: 67  --LGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYM 124
             + ++    P     +++ + +C     +V G+Q H   +KSG      V  +L+ LY 
Sbjct: 112 KKMVVKDNIFP-NEYVIATAISSCDSQM-YVEGKQCHGYALKSGLEFHQYVKNALIQLYS 169

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           + ++V    ++   +  +++  +  +++G  ++      +++   +  EGI+ N+ T+ T
Sbjct: 170 KCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVT 229

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           +  + A    +    QVH  ++K+  +    + +++I MY K   V   R  FD ++ R+
Sbjct: 230 IFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRN 289

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++W S++A Y  NE   EA   F+ M +        T   +    A    L L  QLH+
Sbjct: 290 VVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHA 349

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           +  K+G+  +  +   L++ Y K G +  A  +FS M    ++++W A+I+GH  +G   
Sbjct: 350 RAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNM-TCCNIITWNAIITGHSHHGLGK 408

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHIIKT-NYEKSFSVGTAL 419
            A++ F  M   G RPN  T+  ++ A   +      F    H++K           T +
Sbjct: 409 EALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCI 468

Query: 420 LNAYVKKGILDEAAKVFELID-EKDIVAWSAML 451
           +    + G LDEA           D+V+W  +L
Sbjct: 469 VGLLSRSGRLDEAENFMRSHQINWDVVSWRTLL 501


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/751 (34%), Positives = 401/751 (53%), Gaps = 70/751 (9%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           + S  A  V  + + +   +R  N+E  R  FD M      S+ +L++GY RN + D  L
Sbjct: 9   LPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAAL 68

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS-M 223
            LF                                  H M  ++ G       NALI+ +
Sbjct: 69  GLF----------------------------------HRMPSRDLGSY-----NALIAGL 89

Query: 224 YLKSKMVRDARAVFDGMEDRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
            L+   + DA A    +    S+ ++ S++ GYV + L  +A   F+ M     E    T
Sbjct: 90  SLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQM----PERNHVT 145

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           +  ++        +  AR+L  ++     D D   RT ++  Y + G++ +A  +F  M 
Sbjct: 146 YTVLLGGFLDAGRVNEARKLFDEM----PDKDVVARTAMLSGYCQAGRITEARALFDEMP 201

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHA 402
           + ++VVSWTAMISG+ QNG + LA   F  M       N  +++ +L         +   
Sbjct: 202 K-RNVVSWTAMISGYAQNGKVILARKLFEVMPDR----NEVSWTAMLVGYIQAGHVEDAE 256

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
            +     +   +   A++  + + G++D A  +FE +  +D   WSAM+  Y Q      
Sbjct: 257 DLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLME 316

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+  +R++   G++PN  +F S++  C A + A + G++ HA  ++   +  +   SAL+
Sbjct: 317 ALSTFREMLCRGIRPNYTSFISILTVCAALATA-DYGRELHAAMLRCSFDTDVFAVSALI 375

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           TMY K GN++ A  VF     +D+V WNSMI GYAQHG  ++AL +F ++R   +  DGI
Sbjct: 376 TMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGI 435

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           T+IGV+TAC++ G V EG++ F+ M     I     HYSCMVDL  RAG++++A+D+IN 
Sbjct: 436 TYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINN 495

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MP    A +W  ++ ACR              L+ L+P  +  YVLLS++Y +TG W++ 
Sbjct: 496 MPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDA 555

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGY 747
           + +RK ++ R + K  G SWIE     + F +GD+ SHP+   I + LEEL   L ++GY
Sbjct: 556 SDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGY 615

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
             D S+VL D+D+E K   L  HSER A+A+GL+  PAG P++++KNLRVCGDCH+ IKL
Sbjct: 616 SADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKL 675

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           I+K+  R+I++RD NRFHHFK+GLCSC DYW
Sbjct: 676 ITKITSREIILRDANRFHHFKDGLCSCRDYW 706



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/225 (20%), Positives = 118/225 (52%), Gaps = 2/225 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F+R   R+   ++ ++  Y ++    EAL+ F  +   G+    ++  S+L  C  L
Sbjct: 287 KAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAAL 346

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +GR++H   ++  F  DV   ++L+ +Y++  N++  +RVF+     +VV W S++
Sbjct: 347 ATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMI 406

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGG 210
           +GYA++ + +  L +F  +++  + P+  T+  VL   +  G V    ++ ++M + +  
Sbjct: 407 TGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSI 466

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
            +  +  + ++ +  ++ +V +A  + + M  + D+I W +++  
Sbjct: 467 RLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGA 511


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/684 (35%), Positives = 394/684 (57%), Gaps = 53/684 (7%)

Query: 170 MQVEGIKP-NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           M++   +P +SF  + +L + A  G ++ A  V   + K          N L+S Y K  
Sbjct: 48  MELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRD----VYSWNTLLSAYAKMG 103

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
           MV +   VFD M  RDS+++N+++A + +N    +A +    M   G + T+ + V+ ++
Sbjct: 104 MVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQ 163

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C+   +LR  +Q+H +++   +  +  +R  +   Y+KCG ++ A  +F  M + K+VV
Sbjct: 164 ACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMID-KNVV 222

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTN 408
           SW  MISG+++ G  +  ++ F +M   G++P+  T S +L                   
Sbjct: 223 SWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVL------------------- 263

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                       NAY + G +D+A  +F  + +KD + W+ M+ GYAQ G  E A  ++ 
Sbjct: 264 ------------NAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFG 311

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            +    VKP+ +T SS++++C A  A++  G+  H   +   ++N++ VSSALV MY K 
Sbjct: 312 DMLRRNVKPDSYTISSMVSSC-AKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKC 370

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G    A  +F+    R++++WN+MI GYAQ+G   +AL +++ M++++ + D ITF+GV+
Sbjct: 371 GVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVL 430

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
           +AC +A +V EGQ+YFD  ++EH I PT++HY+CM+ L  R+G ++KA+D+I  MP   +
Sbjct: 431 SACINADMVKEGQKYFD-SISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPN 489

Query: 649 ATVWRTVLAAC-------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
             +W T+L+ C              L  L P ++  Y++LSN+YAA G W++ A VR LM
Sbjct: 490 YRIWSTLLSVCAKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLM 549

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
            ++  KK A YSW+EV NK + F++ D  HP+  +IY +L  L + L+  GY PDT+ VL
Sbjct: 550 KEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVL 609

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAG-APLQIVKNLRVCGDCHTVIKLISKLERR 814
            ++ +E K   +S HSE+LA+AF L+  P G AP++I+KN+RVC DCH  +K  S    R
Sbjct: 610 HNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISR 669

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
            I++RD+NRFHHF  G CSC D W
Sbjct: 670 PIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 236/501 (47%), Gaps = 55/501 (10%)

Query: 52  EYCRDSLHQEALNLFLGIRRLG----LPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKS 107
           +Y R  LH    N F+  +RL     L LF    S +      L+   FG+    + V  
Sbjct: 24  DYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAK-FGKLSDAQNVFD 82

Query: 108 GFA-RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
               RDV    +L+  Y +   VE+   VFD M   + VS+ +L++ +A N  + + L++
Sbjct: 83  NMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKV 142

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGGEVVTSVCNALISMYL 225
             RMQ +G +P  ++    L   +    +    Q+H  +V+ + GE  T V NA+  MY 
Sbjct: 143 LVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGE-NTFVRNAMTDMYA 201

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   +  AR +FDGM D++ ++WN M++GYV      E    FN M L+G +    T  +
Sbjct: 202 KCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSN 261

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+                                    AY +CG+++DA  +F  + + K
Sbjct: 262 VLN-----------------------------------AYFRCGRVDDARNLFIKLPK-K 285

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VH 401
           D + WT MI G+ QNG  + A   F  M R  V+P+ +T S ++++   ++       VH
Sbjct: 286 DEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVH 345

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
             ++    + S  V +AL++ Y K G+  +A  +FE +  ++++ W+AM+ GYAQ G   
Sbjct: 346 GKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVL 405

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS---IKAKLNNALCVS 518
            A+ +Y ++  E  KP+  TF  V++AC       E  K F + S   I   L++  C  
Sbjct: 406 EALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYAC-- 463

Query: 519 SALVTMYSKKGNIESASEVFK 539
             ++T+  + G+++ A ++ +
Sbjct: 464 --MITLLGRSGSVDKAVDLIQ 482



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/461 (24%), Positives = 200/461 (43%), Gaps = 74/461 (16%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+ P R+ V YN L+  +  +    +AL + + ++  G      +  + L+ C  L D
Sbjct: 111 VFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLD 170

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   V +    +  V  ++ D+Y +  +++  R +FD M + NVVSW  ++SG
Sbjct: 171 LRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISG 230

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y +    +  + LF+ MQ+ G+KP+  T S VL                           
Sbjct: 231 YVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNA------------------------- 265

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
                     Y +   V DAR +F  +  +D I W +M+ GY  N    +A+  F +M  
Sbjct: 266 ----------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLR 315

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    T  S++  CA    L   + +H +V+  GID    + + L+  Y KCG   D
Sbjct: 316 RNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLD 375

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  IF  M  +++V++W AMI G+ QNG +  A+  + +M +E  +P+  T+        
Sbjct: 376 ARVIFETM-PIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITF-------- 426

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA----WSA 449
                                    +L+A +   ++ E  K F+ I E  I      ++ 
Sbjct: 427 -----------------------VGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYAC 463

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           M+    + G  + AV + + +  E   PN   +S++++ C 
Sbjct: 464 MITLLGRSGSVDKAVDLIQGMPHE---PNYRIWSTLLSVCA 501



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 4/261 (1%)

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           SG   D+   +++++ Y R   V+D R +F  + + + + WT+++ GYA+N   +    L
Sbjct: 250 SGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWML 309

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           F  M    +KP+S+T S+++   A    +     VH  V+  G +    V +AL+ MY K
Sbjct: 310 FGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCK 369

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
             +  DAR +F+ M  R+ ITWN+M+ GY  N   +EA   +  M     +    TFV V
Sbjct: 370 CGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGV 429

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           +  C     ++  ++    + ++GI    +    ++    + G ++ A  +   M    +
Sbjct: 430 LSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPN 489

Query: 347 VVSWTAMIS----GHLQNGAI 363
              W+ ++S    G L+N  +
Sbjct: 490 YRIWSTLLSVCAKGDLKNAEL 510



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 111/223 (49%), Gaps = 1/223 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++LF + P+++ + +  ++  Y ++   ++A  LF  + R  +     T+SS++ +C  L
Sbjct: 276 RNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKL 335

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH + V  G    + VS++LVD+Y +     D R +F+ M   NV++W +++
Sbjct: 336 ASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMI 395

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GYA+N      L L+ RMQ E  KP++ TF  VL    +  +V    +    + ++G  
Sbjct: 396 LGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIA 455

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI-TWNSMVA 253
                   +I++  +S  V  A  +  GM    +   W+++++
Sbjct: 456 PTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLS 498


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/644 (39%), Positives = 376/644 (58%), Gaps = 23/644 (3%)

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           S+ N LI  YLK   V  AR VFD +  R  + WNSM+A Y+ N    EA + +  M   
Sbjct: 111 SLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD 170

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYSKCGKMED 333
           G      TF SV K  +    +   ++ H Q +  G+   +  + + L+  Y+K GKM D
Sbjct: 171 GILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRD 230

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A ++ S     KDVV +TA+I G+  +G    ++  F  MT++G+  N +T S +L    
Sbjct: 231 A-RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCG 289

Query: 392 --QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             +   S   +H  I+K   E + +  T+LL  Y + G++D++ KVF+     + V W++
Sbjct: 290 NLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTS 349

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++ G  Q G  E A+  +RQ+    + PN FT SSV+ AC++  A +EQGKQ HA  +K 
Sbjct: 350 VIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSL-AMLEQGKQIHAIVMKF 408

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L+    V +AL+  Y K G+ E A  VF    + D+VS NSMI  YAQ+G   +AL++F
Sbjct: 409 GLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLF 468

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             M+   LE + +T++GV++AC +AGL++EG   F    N  +I  T +HY+CMVDL  R
Sbjct: 469 SGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGR 528

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLL 675
           AG L++A  +IN++  +    +WRT+L+ACR+              I L P D   +VLL
Sbjct: 529 AGRLKEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLL 587

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN+YA+TG+W +   ++  M + ++KK    SW++V+ + ++F+AGD SHP    I  KL
Sbjct: 588 SNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKL 647

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV-ATPAGAPLQIVKN 794
           EEL  ++K+ GY PDT +VLQD+D+E K   L  HSE+LA+AF L  +      ++I+KN
Sbjct: 648 EELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKN 707

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVCGDCHT +K +SK+  RDI+ RD  RFHHF+ GLCSCGDYW
Sbjct: 708 LRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 250/485 (51%), Gaps = 20/485 (4%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++    +K GF    ++   L+D Y++  +V   R+VFD++   ++V+W S+++ Y RN 
Sbjct: 98  KIQSHALKRGFHH--SLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNG 155

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-GEVVTSVC 217
            +   ++++ RM  +GI P+ FTFS+V    +D G+V    + H   +  G G     V 
Sbjct: 156 RSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVG 215

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           +AL+ MY K   +RDAR V D +  +D + + +++ GY  +    E+ + F NM   G E
Sbjct: 216 SALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIE 275

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               T  SV+  C   ++L   R +H  ++K G++     +T L+  Y +CG ++D+ K+
Sbjct: 276 ANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKV 335

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F       + V+WT++I G +QNG  ++A+  F QM R  + PN FT S +L A  +++ 
Sbjct: 336 FKQFIN-PNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAM 394

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                Q+HA ++K   +    VG AL++ Y K G  + A  VF  + E D+V+ ++M+  
Sbjct: 395 LEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYS 454

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           YAQ G    A++++  +   G++PN  T+  V++AC   +  +E+G     C I +   N
Sbjct: 455 YAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACN-NAGLLEEG-----CHIFSSARN 508

Query: 514 ALCVS------SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +  +       + +V +  + G ++ A  +  +    D+V W +++     HG  + A  
Sbjct: 509 SGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKR 568

Query: 568 VFKEM 572
           V   +
Sbjct: 569 VMNRV 573



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 222/453 (49%), Gaps = 10/453 (2%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS 83
           S  Y++K   +FD  P R+ V +N ++  Y R+   +EA++++  +   G+     T SS
Sbjct: 125 SVVYARK---VFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSS 181

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFA-RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           V K    L     G++ H + V  G    +V V ++LVD+Y +   + D R V D +   
Sbjct: 182 VFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGK 241

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +VV +T+L+ GY+ +  +   L++F  M  +GI+ N +T S+VL    +   + +   +H
Sbjct: 242 DVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIH 301

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
            +++K G E   +   +L++MY +  +V D+  VF    + + +TW S++ G V N    
Sbjct: 302 GLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREE 361

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            A   F  M  +       T  SV++ C++   L   +Q+H+ V+K G+D D  +   L+
Sbjct: 362 IALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALI 421

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KCG  E A  +F+ + E+ DVVS  +MI  + QNG    A+  F  M   G+ PN 
Sbjct: 422 DFYGKCGSTEIARSVFNGLLEV-DVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNN 480

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            T+  +L+A       +   HI  +     N E +      +++   + G L EA  +  
Sbjct: 481 VTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLIN 540

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            ++  D+V W  +L+     GD E A ++  ++
Sbjct: 541 QVNISDVVIWRTLLSACRIHGDVEMAKRVMNRV 573


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/703 (34%), Positives = 388/703 (55%), Gaps = 67/703 (9%)

Query: 201  VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
            +H + +KNG     +  N L+++Y KS  +  A+ +FD +  R++ TW  +++G+     
Sbjct: 311  LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 261  HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
                F  F  M   GA   + T  SV+K C+    L+L + +H+ +L+NGID D  +   
Sbjct: 371  SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 321  LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF---------- 370
            ++  Y KC   E A ++F +M E  DVVSW  MI  +L+ G ++ +++ F          
Sbjct: 431  ILDLYLKCKVFEYAERLFELMNE-GDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVS 489

Query: 371  ----------CQMTRE-----------GVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
                      C   R            G   +  T+SI L    ++S      Q+H  ++
Sbjct: 490  WNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVL 549

Query: 406  KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID----------------EKDIVAWSA 449
            K  ++    + ++L+  Y K G +D+A+ +   +                 +  IV+W +
Sbjct: 550  KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGS 609

Query: 450  MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            M++GY   G  E  +K +R +  E V  +  T +++I+AC A +  +E G+  HA   K 
Sbjct: 610  MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC-ANAGILEFGRHVHAYVQKI 668

Query: 510  KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
                   V S+L+ MYSK G+++ A  VF++  + ++V W SMI GYA HG    A+ +F
Sbjct: 669  GHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLF 728

Query: 570  KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +EM  Q +  + +TF+GV+ AC+HAGL++EG +YF +M + + I P +EH + MVDLY R
Sbjct: 729  EEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGR 788

Query: 630  AGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLL 675
            AG L K  + I +   +   +VW++ L++CRL              + + P D   YVLL
Sbjct: 789  AGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLL 848

Query: 676  SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
            SNM A+   W E ARVR LM+ R VKK+ G SWI++K++ ++F+ GD SHPQ ++IYS L
Sbjct: 849  SNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYL 908

Query: 736  EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
            + L  RLK+ GY  D   V+QD+++E  E ++S HSE+LA+ FG++ T    P++I+KNL
Sbjct: 909  DILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNL 968

Query: 796  RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R+C DCH  IK  S+L  R+I+VRD +RFHHFK G CSCGDYW
Sbjct: 969  RICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 271/565 (47%), Gaps = 64/565 (11%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H   VK+G  + +N +  L+ LY ++NN+   +++FD++ + N  +WT L+SG+AR   
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
           ++ V  LF  MQ +G  PN +T S+VL   + +  +     VH  +++NG +V   + N+
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY-----VTNELHM------------ 262
           ++ +YLK K+   A  +F+ M + D ++WN M+  Y     V   L M            
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 263 --------------EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
                          A E    M   G E +  TF   + L ++   + L RQLH  VLK
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKIF---------------SMMREMKDVVSWTAM 353
            G D D  IR+ L+  Y KCG+M+ AS I                S       +VSW +M
Sbjct: 551 FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT--AQPAVSPF--QVHAHIIKTNY 409
           +SG++ NG  +  +  F  M RE V  +  T + I++  A   +  F   VHA++ K  +
Sbjct: 611 VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH 670

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                VG++L++ Y K G LD+A  VF   +E +IV W++M++GYA  G    A+ ++ +
Sbjct: 671 RIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEE 730

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS------SALVT 523
           + ++G+ PNE TF  V+NAC+  +  +E+G     C     + +A C++      +++V 
Sbjct: 731 MLNQGIIPNEVTFLGVLNACSH-AGLIEEG-----CRYFRMMKDAYCINPGVEHCTSMVD 784

Query: 524 MYSKKGNI-ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           +Y + G++ ++ + +FK         W S +     H + +    V  EM  Q    D  
Sbjct: 785 LYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWV-SEMLLQVAPSDPG 843

Query: 583 TFIGVITACTHAGLVDEGQQYFDIM 607
            ++ +   C      DE  +   +M
Sbjct: 844 AYVLLSNMCASNHRWDEAARVRSLM 868



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 197/432 (45%), Gaps = 58/432 (13%)

Query: 14  QTKQPPKSLRSPFYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG 68
           QT  P   L +  Y+K +     Q LFD  PQRN   +  L+  + R    +   NLF  
Sbjct: 322 QTLNPANHLLT-LYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFRE 380

Query: 69  IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN 128
           ++  G      TLSSVLK C    +   G+ VH   +++G   DV +  S++DLY++   
Sbjct: 381 MQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKV 440

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE--------------- 173
            E   R+F+ MNE +VVSW  ++  Y R    ++ L++F R+  +               
Sbjct: 441 FEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQC 500

Query: 174 ----------------GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                           G + ++ TFS  L + +    V    Q+H MV+K G +    + 
Sbjct: 501 GYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIR 560

Query: 218 NALISMYLK-------SKMVRD----------ARAVFDGMEDRDSI-TWNSMVAGYVTNE 259
           ++L+ MY K       S ++RD          AR  +   E +  I +W SMV+GYV N 
Sbjct: 561 SSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYK--EPKAGIVSWGSMVSGYVWNG 618

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            + +  +TF  M      +   T  ++I  CA    L   R +H+ V K G   D  + +
Sbjct: 619 KYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGS 678

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  YSK G ++DA  +F    E  ++V WT+MISG+  +G    A+  F +M  +G+ 
Sbjct: 679 SLIDMYSKSGSLDDAWMVFRQSNE-PNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGII 737

Query: 380 PNGFTYSIILTA 391
           PN  T+  +L A
Sbjct: 738 PNEVTFLGVLNA 749



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 121/279 (43%), Gaps = 16/279 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K   +F R P ++ V +N ++    +    + AL     +   G      T S  L   
Sbjct: 473 EKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILA 532

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM--------- 139
             L     GRQ+H   +K GF  D  + +SLV++Y +   ++    +  D+         
Sbjct: 533 SSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGN 592

Query: 140 -------NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
                   ++ +VSW S++SGY  N   +  L+ F  M  E +  +  T +T++   A+ 
Sbjct: 593 ARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANA 652

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           GI+     VH  V K G  +   V ++LI MY KS  + DA  VF    + + + W SM+
Sbjct: 653 GILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMI 712

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +GY  +   M A   F  M   G      TF+ V+  C+
Sbjct: 713 SGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACS 751



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 130/280 (46%), Gaps = 9/280 (3%)

Query: 37  RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
           + P+   V +  ++  Y  +  +++ L  F  + R  + +   T+++++  C       F
Sbjct: 598 KEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEF 657

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR VH    K G   D  V +SL+D+Y ++ +++D   VF   NE N+V WTS++SGYA 
Sbjct: 658 GRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYAL 717

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +      + LF  M  +GI PN  TF  VL   +  G++    +   M +K+   +   V
Sbjct: 718 HGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRM-MKDAYCINPGV 776

Query: 217 --CNALISMYLKS-KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH--MEAFETFNNM 271
             C +++ +Y ++  + +    +F       +  W S ++   +  LH  +E  +  + M
Sbjct: 777 EHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLS---SCRLHKNVEMGKWVSEM 833

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
            L  A      +V +  +CA+      A ++ S + + G+
Sbjct: 834 LLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGV 873


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/742 (34%), Positives = 395/742 (53%), Gaps = 23/742 (3%)

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           + +  +++ + +R        RVF  M E +V SW  ++ GY ++ + D  L+L+HRM  
Sbjct: 123 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMW 182

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G++P+ +TF  VL             +VH  V++ G      V NAL++MY K   V  
Sbjct: 183 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMA 242

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFD M   D I+WN+M+AG+  N       E F  M     +    T  SV      
Sbjct: 243 ARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGL 302

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             ++  A+++H   +K G   D      L+  Y+  G M  A  +FS M + +D ++WTA
Sbjct: 303 LSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRM-DTRDAMTWTA 361

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           MISG+ +NG  D A+  +  M    V P+  T +  L A   +    V   + +    K 
Sbjct: 362 MISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG 421

Query: 413 F----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           F     V  A+L  Y K   +D+A +VF+ + EKD+V+WS+M+AG+        A+  +R
Sbjct: 422 FISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFR 481

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            + ++ VKPN  TF + + A  A + A+  GK+ HA  ++  +     + +AL+ +Y K 
Sbjct: 482 HMLAD-VKPNSVTFIAALAA-CAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKC 539

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G    A   F     +D+VSWN MI G+  HGH   AL  F +M +     D +TF+ ++
Sbjct: 540 GQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALL 599

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC+  G+V EG + F  M  ++ I P ++HY+CMVDL SRAG L +A + IN MP    
Sbjct: 600 CACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPD 659

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A VW  +L  CR+              ++L+P+D+  +VLL ++YA    W + ARVRK 
Sbjct: 660 AAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKT 719

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M ++ +  ++G SW+EVK   ++FL  D SHPQ  +I + LE +  R+K +GY P  S+ 
Sbjct: 720 MREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVESHC 779

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
            +D  +  K+ I   HSERLA+AFGL+ T  G  + + KN   C  CH ++K+IS + RR
Sbjct: 780 PED--EVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRR 837

Query: 815 DIVVRDTNRFHHFKEGLCSCGD 836
           DI+VRD+ + HHFK+G CSCGD
Sbjct: 838 DIIVRDSKQLHHFKDGSCSCGD 859



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 268/538 (49%), Gaps = 13/538 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F + P+R+   +N ++  Y +  L  EAL+L+  +   G+     T   VL++CG + D
Sbjct: 145 VFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 204

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR+VH   ++ GF  +V+V  +L+ +Y +  +V   R+VFD M   + +SW ++++G
Sbjct: 205 WRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAG 264

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGG 210
           +  N   +  LELF  M  + ++PN  T ++V    G+L+D   V  A ++H + +K G 
Sbjct: 265 HFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSD---VTFAKEMHGLAVKRGF 321

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
               + CN+LI MY    M+R AR VF  M+ RD++TW +M++GY  N    +A E +  
Sbjct: 322 AGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYAL 381

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M +        T  S +  CA    L +  +LH      G      +   ++  Y+K  +
Sbjct: 382 MEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKR 441

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++ A ++F  M E KDVVSW++MI+G   N     A+ +F  M  + V+PN  T+   L 
Sbjct: 442 IDKAIEVFKCMHE-KDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALA 499

Query: 391 AQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A  A     S  ++HAH+++   E    +  AL++ YVK G    A   F     KD+V+
Sbjct: 500 ACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVS 559

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ M+AG+   G  + A+  + Q+   G  P+E TF +++ AC+      E  + FH+ +
Sbjct: 560 WNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMT 619

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
            K  +   L   + +V + S+ G +  A           D   W +++ G   H H +
Sbjct: 620 EKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVE 677



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 213/431 (49%), Gaps = 14/431 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD     + + +N ++  +  +      L LFL +    +     T++SV    G L
Sbjct: 244 RKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLL 303

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  F +++H   VK GFA DV    SL+ +Y     +   R VF  M+  + ++WT+++
Sbjct: 304 SDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMI 363

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +N   D+ LE++  M+V  + P+  T ++ L   A  G +   V++H +    G  
Sbjct: 364 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFI 423

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NA++ MY KSK +  A  VF  M ++D ++W+SM+AG+  N  + EA   F +M
Sbjct: 424 SYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 483

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            LA  +    TF++ +  CA T  LR  +++H+ VL+ GI+++  +   L+  Y KCG+ 
Sbjct: 484 -LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQT 542

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A   F      KDVVSW  MI+G + +G  D A++FF QM + G  P+  T+  +L A
Sbjct: 543 GYAWAQFC-AHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCA 601

Query: 392 ---QPAVSPFQVHAHIIKTNYE-----KSFSVGTALLNAYVKKGILDEAAK-VFELIDEK 442
                 VS      H +   Y      K ++    LL+   + G L EA   + E+    
Sbjct: 602 CSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLS---RAGQLTEAYNFINEMPITP 658

Query: 443 DIVAWSAMLAG 453
           D   W A+L G
Sbjct: 659 DAAVWGALLNG 669


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/687 (35%), Positives = 389/687 (56%), Gaps = 30/687 (4%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAV-QVHTMVIKNG----GEVVTSVCNALISMYLKSKM 229
           I  + F F +    L D  +    + Q+H  ++ +G    G +VT   NA  ++      
Sbjct: 63  IPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNI----GE 118

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           +  AR VFD   +     WN+++ GY ++    +A E ++ M  +G      T   V+K 
Sbjct: 119 IGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKA 178

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C+    L + +++H Q+ + G + D  ++ GL+  Y+KCG++E A  +F  + + +++VS
Sbjct: 179 CSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDD-RNIVS 237

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHII 405
           WT+MISG+ QNG    A+  F QM +  V+P+      +L A   V   +    +H  ++
Sbjct: 238 WTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV 297

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K   E    +  +L   Y K G +  A   F+ ++  +++ W+AM++GYA+ G T  AV 
Sbjct: 298 KMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVG 357

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           +++++ S+ ++ +  T  S I AC A   +++  K       K +  N + V++AL+ M+
Sbjct: 358 LFQEMISKNIRTDSITVRSAILAC-AQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMF 416

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           +K G+++ A EVF R   +D+V W++MI GY  HG  + A+++F  M++  +  + +TF+
Sbjct: 417 AKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFV 476

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
           G++TAC H+GLV+EG + F  M   + I    +HY+C+VDL  R+G L +A D I  MP 
Sbjct: 477 GLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPI 535

Query: 646 AASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARV 691
               +VW  +L AC+              L SL P ++  YV LSN+YA++  W   A+V
Sbjct: 536 EPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKV 595

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           R LM ++ + K+ GYS IE+  K  +F  GD SHP+  +I+ +LE L  RLK+AG+ P  
Sbjct: 596 RILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHI 655

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
             VL D++ E KE  L  HSERLAIA+GL++T  G  L+I KNLR C +CH+  KLISKL
Sbjct: 656 ESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKL 715

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             R+IVVRD NRFHHFK G+CSC DYW
Sbjct: 716 VNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 237/472 (50%), Gaps = 17/472 (3%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H + V SG      + T  V+       +   R+VFD+  E +V  W +++ GY+ + 
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                +E++ RMQ  G+ P+ FT   VL   +   ++    +VH  + + G E    V N
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            L+++Y K   V  AR VF+G++DR+ ++W SM++GY  N L MEA   F  M     + 
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
                VSV++     ++L   + +H  V+K G++F+ ++   L   Y+KCG++  A   F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M E+ +V+ W AMISG+ +NG  + AV  F +M  + +R +  T    + A   V   
Sbjct: 329 DQM-EIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387

Query: 399 QVHA----HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
            +      +I KT Y     V TAL++ + K G +D A +VF+   +KD+V WSAM+ GY
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGY 447

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHAC---SIKAK 510
              G  + A+ ++  +   GV PN+ TF  ++ AC   S  VE+G + FH+     I+A+
Sbjct: 448 GLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNH-SGLVEEGWELFHSMKYYGIEAR 506

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMI--CGYAQH 559
             +  CV    V +  + G++  A +          VS W +++  C   +H
Sbjct: 507 HQHYACV----VDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRH 554



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 216/447 (48%), Gaps = 13/447 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   +FD  P+ +   +N ++  Y   +   +A+ ++  ++  G+   G TL  VLK
Sbjct: 121 YARK---VFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLK 177

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  +     G++VH +  + GF  DV V   LV LY +   VE  R VF+ +++ N+VS
Sbjct: 178 ACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVS 237

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WTS++SGY +N +    L +F +M+   +KP+     +VL    D   +     +H  V+
Sbjct: 238 WTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV 297

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G E    +  +L +MY K   V  AR+ FD ME  + + WN+M++GY  N    EA  
Sbjct: 298 KMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVG 357

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M          T  S I  CA    L LA+ +   + K     D  + T L+  ++
Sbjct: 358 LFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFA 417

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG ++ A ++F    + KDVV W+AMI G+  +G    A++ F  M + GV PN  T+ 
Sbjct: 418 KCGSVDLAREVFDRTLD-KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFV 476

Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK--KGILDEAAKVFELIDEKDI 444
            +LTA         H+ +++  +E   S+    + A  +    ++D   +   L +  D 
Sbjct: 477 GLLTACN-------HSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDF 529

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           +    +  G +  G   GA KIYR +T
Sbjct: 530 ITTMPIEPGVSVWGALLGACKIYRHVT 556



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 9/169 (5%)

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
           S+ +  + F F S  ++    S       Q HA  + + L  +  + +  V      G I
Sbjct: 60  SDYIPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEI 119

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
             A +VF    +  +  WN++I GY+ H     A+E++  M+   +  DG T   V+ AC
Sbjct: 120 GYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKAC 179

Query: 592 THAGLVDEGQ----QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +   +++ G+    Q F +   E  ++      + +V LY++ G +E+A
Sbjct: 180 SGVPVLEVGKRVHGQIFRLGF-ESDVFVQ----NGLVALYAKCGRVEQA 223


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 260/768 (33%), Positives = 398/768 (51%), Gaps = 129/768 (16%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--------------- 242
           A  VH  +I +G +    + N LI +Y KS  +  AR +FD +                 
Sbjct: 32  ARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSA 91

Query: 243 ------------------RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
                             RDS+ +N+M+  Y  N     A E F +M          TF 
Sbjct: 92  AGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFT 151

Query: 285 SVIKLCATTKEL-RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK---------MEDA 334
           SV+   A   E  +  +QLH  V+K+G  F  ++   L+ +Y KC           M +A
Sbjct: 152 SVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEA 211

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF------------------------- 369
            K+F  M   +D +SWT +I+G+++N  +D A  F                         
Sbjct: 212 RKLFDEMPN-RDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLY 270

Query: 370 ------FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT----NYEKSFSV 415
                 F +M    ++ + FT++ +++       F    ++HA+ +KT      + +  V
Sbjct: 271 LEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPV 330

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY--------------------- 454
             AL+  Y K G +D A ++F  + E+D+V+W+ +L+GY                     
Sbjct: 331 NNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNI 390

Query: 455 ----------AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
                     AQIG  E A+K + ++  +G +P ++ F+  I +C+    +++ G+Q HA
Sbjct: 391 LSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSV-LGSLKHGRQLHA 449

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             ++    ++L   +AL+TMY++ G +++A  +F      D +SWN+MI    QHG   +
Sbjct: 450 QVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQ 509

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           A+E+F+EM ++ +  D I+F+ VI+AC+HAGLV EG++YFD M N + + P  EHY+ ++
Sbjct: 510 AIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARII 569

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           DL  RAG   +A +++  MPF   A +W  +LA CR              L  L+P    
Sbjct: 570 DLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDG 629

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YVLLSNMYA  G W + A+VRKLM DR VKKE G SWIEV+NK +SFL GD +HP+  Q
Sbjct: 630 TYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQ 689

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           IY+ LE+L   ++  GY PDT  VL D++ + KE  LS HSE+LA+A+G +  P GA ++
Sbjct: 690 IYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVR 749

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + KNLR+CGDCH   K +SK+  R+IVVRD  RFHHF++G CSCGDYW
Sbjct: 750 VFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 161/618 (26%), Positives = 279/618 (45%), Gaps = 123/618 (19%)

Query: 83  SVLKTCGCL---FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           S+L+ C CL     +   R VH   + SGF    ++   L+D+Y +++ +   R +FD++
Sbjct: 16  SLLQIC-CLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEI 74

Query: 140 NESNVVSWTSLLSGYARNK---------------MNDRV------------------LEL 166
            + ++V+ T+L++ Y+                  M D V                  +EL
Sbjct: 75  PQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIEL 134

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVAT----AVQVHTMVIKNGGEVVTSVCNALIS 222
           F  MQ +  +P+++TF++VLG LA   +VA       Q+H  V+K+G   VTSV NALIS
Sbjct: 135 FCDMQRDNFRPDNYTFTSVLGALA---LVAEKEKHCQQLHCAVVKSGTGFVTSVLNALIS 191

Query: 223 MYLK---------SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE-------------- 259
            Y+K         S ++ +AR +FD M +RD ++W +++ GYV N               
Sbjct: 192 SYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSK 251

Query: 260 -----------------LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
                            L++EAFE F  M ++  +L   TF SVI +CA     RL +++
Sbjct: 252 KLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEM 311

Query: 303 HSQVLKN----GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM-------------- 344
           H+  LK       D    +   L+  Y KCGK++ A +IF+ M E               
Sbjct: 312 HAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVN 371

Query: 345 ----------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
                           K+++SW  MISG  Q G  + A+ FF +M  +G  P  + ++  
Sbjct: 372 VRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGA 431

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           + +   +       Q+HA +++  YE S S G AL+  Y + G++D A  +F  +   D 
Sbjct: 432 IISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDA 491

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           ++W+AM+A   Q G    A++++ ++  EG+ P+  +F +VI+AC+      E  K F +
Sbjct: 492 ISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDS 551

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
                 +N      + ++ +  + G    A EV +    +     W +++ G   HG+  
Sbjct: 552 MHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNID 611

Query: 564 KALEVFKEMRRQDLEFDG 581
             +E  + +     + DG
Sbjct: 612 LGIEAAERLFELKPQHDG 629



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 228/533 (42%), Gaps = 99/533 (18%)

Query: 29  KKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           K  + +F  +P   R+ V YN ++  Y  +     A+ LF  ++R        T +SVL 
Sbjct: 96  KLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLG 155

Query: 87  TCGCLFD-HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN---------VEDGRRVF 136
               + +     +Q+HC  VKSG     +V  +L+  Y++            + + R++F
Sbjct: 156 ALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLF 215

Query: 137 DDMNESNVVSWTSLLSGYARNKMND-------------------------------RVLE 165
           D+M   + +SWT++++GY +N   D                                  E
Sbjct: 216 DEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFE 275

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN----GGEVVTSVCNALI 221
           +F +M +  I+ + FTF++V+ V A+ G      ++H   +K       +V   V NALI
Sbjct: 276 MFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALI 335

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT-----------NELH--------- 261
           + Y K   V  A+ +F+ M +RD ++WN +++GYV            NE+          
Sbjct: 336 TFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWII 395

Query: 262 -----------MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
                       EA + FN M L G E     F   I  C+    L+  RQLH+QV++ G
Sbjct: 396 MISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYG 455

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
            +   +    L+  Y++CG ++ A  +F  M    D +SW AMI+   Q+G    A+  F
Sbjct: 456 YESSLSAGNALITMYARCGVVDAAHCLFINM-PCVDAISWNAMIAALGQHGQGTQAIELF 514

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------------ 418
            +M +EG+ P+  ++  +++A         HA ++K   +   S+               
Sbjct: 515 EEMLKEGILPDRISFLTVISACS-------HAGLVKEGRKYFDSMHNVYGVNPDEEHYAR 567

Query: 419 LLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           +++   + G   EA +V E +  E     W A+LAG    G+ +  ++   +L
Sbjct: 568 IIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERL 620


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/706 (35%), Positives = 397/706 (56%), Gaps = 28/706 (3%)

Query: 63  LNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDL 122
           +NL+L      LP    +   +L  C    D   G+ +H + +++G    V ++ SLV+L
Sbjct: 1   MNLYL------LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNL 54

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM--NDRVLELFHRMQVEGIKPNSF 180
           Y +  ++   + VF+ +   +VVSW  L++GY++        V+ELF RM+ E   PN  
Sbjct: 55  YAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGH 114

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TFS V    +        +Q H + IK        V ++LI+MY K   + DAR VFD +
Sbjct: 115 TFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTI 174

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            +R++++W ++++GY    +  EA+E F  M        +  + SV+        +   +
Sbjct: 175 PERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGK 234

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           Q+H   LKNG+    ++   L+  Y KCG ++DA K F +  + KD ++W+AMI+G+ Q 
Sbjct: 235 QIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGD-KDDITWSAMITGYAQA 293

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG 416
           G    A+N F  M   G +P+ FT+  ++ A   +       Q+H + +K  YE      
Sbjct: 294 GDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFM 353

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           TAL++ Y K G L +A K F+ + E DIV W++M++GYAQ G+ E A+ +Y ++  E + 
Sbjct: 354 TALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIM 413

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+E T +SV+ AC++  AA+EQGKQ HA +IK   +  + + SAL TMY+K G++E  + 
Sbjct: 414 PHELTMASVLRACSSL-AALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNL 472

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF+R   RD+++WN+MI G +Q+G   KALE+F+E+R    + D +TF+ V++AC+H GL
Sbjct: 473 VFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGL 532

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V+ G+ YF +M++E  I P +EHY+CMVD+ SRAG L +  + I          +WR +L
Sbjct: 533 VERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILL 592

Query: 657 AACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            ACR              L+ L   +S+ Y+LLS++Y A G   +  RVR+LM  R V K
Sbjct: 593 GACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNK 652

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
           E G SWIE+K++ + F+ GD  HPQ  +I S+L  L   +KD  Y+
Sbjct: 653 EPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYE 698



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/479 (32%), Positives = 251/479 (52%), Gaps = 8/479 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSL--HQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           K + +F+    ++ V +N L+  Y +     +   + LF  +R       G T S V   
Sbjct: 63  KAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTA 122

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
                +   G Q H   +K+    DV V +SL+++Y +   + D R+VFD + E N VSW
Sbjct: 123 ASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSW 182

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            +++SGYA  +M     ELF  M+ E    + F +++VL  L    +V    Q+H + +K
Sbjct: 183 ATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALK 242

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           NG   + SV NAL++MY K   + DA   F+   D+D ITW++M+ GY       EA   
Sbjct: 243 NGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNL 302

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F NM L G + +  TFV VI  C+    L   +Q+H   LK G +      T L+  Y+K
Sbjct: 303 FYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAK 362

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG + DA K F  ++E  D+V WT+MISG+ QNG  + A+  +C+M  E + P+  T + 
Sbjct: 363 CGSLVDARKGFDYLKE-PDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMAS 421

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L A  +++      Q+HA  IK  +     +G+AL   Y K G L++   VF  +  +D
Sbjct: 422 VLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 481

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           I+ W+AM++G +Q G+   A++++ +L     KP+  TF +V++AC+     VE+GK +
Sbjct: 482 IMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACS-HMGLVERGKVY 539



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 93/178 (52%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD   + + V +  ++  Y ++  ++ AL L+  ++   +     T++SVL+ C  L   
Sbjct: 373 FDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAAL 432

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+Q+H + +K GF+ +V + ++L  +Y +  ++EDG  VF  M   ++++W +++SG 
Sbjct: 433 EQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGL 492

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           ++N    + LELF  ++    KP+  TF  VL   +  G+V        M++   G V
Sbjct: 493 SQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/514 (42%), Positives = 330/514 (64%), Gaps = 19/514 (3%)

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
           E  D VSW ++I G ++ G  + A++FF +M    ++ + +T   +L +  ++   Q   
Sbjct: 2   EFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAI 61

Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            VH  IIKT +E    V  AL++ Y K+G LD A  VF  + +KD+V+W++++ GY+  G
Sbjct: 62  SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNG 121

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             E A+K++ ++   GV P++   +SV++AC A    ++ G+Q HA  +K+ L ++L V 
Sbjct: 122 SYEEAIKLFCKMRISGVYPDQIAVASVLSAC-AELTVMDFGQQIHATLVKSGLESSLSVD 180

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           ++LVTMY+K G+I  A+  F     RD++SW ++I GYAQ+G  K +L+ + +M     +
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D ITFIG++ AC+H GL+  G+ YF+ M   + I P  EHY+CM+DL  R+G L +A  
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           ++N+M  A  A VW+ +LAACR              L  L+P +S  YV+LSNMY+A G 
Sbjct: 301 LLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGK 360

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W++ AR+R+LM  R + KE GYSWIE  +K  +F++ D +HP  N+IYSK++E+   +K+
Sbjct: 361 WEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKE 420

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
           AGY PD S+ L D DDE KE  L+ HSE+LA+AFGL+  P GAP++I KNLRVCGDCHT 
Sbjct: 421 AGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTA 480

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +K  SK+  R I++RD+N FHHF EG CSCGDYW
Sbjct: 481 MKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 163/328 (49%), Gaps = 20/328 (6%)

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           FDD      VSW SL+ G  R    +  L  F +M+   +K + +T  +VL   A   ++
Sbjct: 3   FDDE-----VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVM 57

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
             A+ VH ++IK G E    V NALI MY K   +  A  VF  M D+D ++W S+V GY
Sbjct: 58  QNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGY 117

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
             N  + EA + F  M ++G    +    SV+  CA    +   +Q+H+ ++K+G++   
Sbjct: 118 SHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSL 177

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
           ++   L+  Y+KCG + DA++ F  M   +DV+SWTA+I G+ QNG    ++ F+ QM  
Sbjct: 178 SVDNSLVTMYAKCGSIVDANRAFDNM-PTRDVISWTALIVGYAQNGRGKHSLQFYDQMIA 236

Query: 376 EGVRPNGFTYSIILTA-------QPAVSPFQVHAHI--IKTNYEKSFSVGTALLNAYVKK 426
            G +P+  T+  +L A           + F+    +  IK   E        +++   + 
Sbjct: 237 TGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHY----ACMIDLLGRS 292

Query: 427 GILDEAAKVF-ELIDEKDIVAWSAMLAG 453
           G L EA  +  +++   D V W A+LA 
Sbjct: 293 GKLAEAKGLLNQMVVAPDAVVWKALLAA 320



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 156/314 (49%), Gaps = 1/314 (0%)

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
           V +N L+    R+   ++AL+ F  +R   + +   TL SVL +   +        VHC 
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
            +K+GF     V+ +L+D+Y +   ++    VF  M + +VVSWTSL++GY+ N   +  
Sbjct: 67  IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           ++LF +M++ G+ P+    ++VL   A+  ++    Q+H  ++K+G E   SV N+L++M
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K   + DA   FD M  RD I+W +++ GY  N     + + ++ M   G +    TF
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246

Query: 284 VSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           + ++  C+    L   R     + K  GI         ++    + GK+ +A  + + M 
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306

Query: 343 EMKDVVSWTAMISG 356
              D V W A+++ 
Sbjct: 307 VAPDAVVWKALLAA 320



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 52/318 (16%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F +   ++ V +  L+  Y  +  ++EA+ LF  +R  G+      ++SVL  C  L  
Sbjct: 98  VFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTV 157

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG+Q+H   VKSG    ++V  SLV +Y +  ++ D  R FD+M   +V+SWT+L+ G
Sbjct: 158 MDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVG 217

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV-----IKN 208
           YA+N      L+ + +M   G KP+  TF  +L   +  G++ +       +     IK 
Sbjct: 218 YAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKP 277

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYVTNELHMEAFET 267
           G E        +I +  +S  + +A+ + + M    D++ W +++A              
Sbjct: 278 GPEHYA----CMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAA------------- 320

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD-HNIRTGLMVA-- 324
                                 C   KEL L         KN  + +  N    +M++  
Sbjct: 321 ----------------------CRVHKELELGE----MAAKNLFELEPMNSMPYVMLSNM 354

Query: 325 YSKCGKMEDASKIFSMMR 342
           YS  GK EDA++I  +MR
Sbjct: 355 YSAAGKWEDAARIRRLMR 372


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/697 (36%), Positives = 389/697 (55%), Gaps = 37/697 (5%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           + PN++TF   L   +          +H   I  G +    V  AL+ MY+K   + DA 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL--TRSTFVSVIKLCAT 292
            +F  M  RD + WN+M+AGY  + ++  A     +M +    L    ST V+++ L A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 293 TKELRLARQLHSQVLKNGIDFDHN----------IRTGLMVAYSKCGKMEDASKIFSMMR 342
              L     +H+  ++  +  + N          + T L+  Y+KCG +  A ++F  M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM- 184

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
             ++ V+W+A+I G +    +  A   F  M  +G+     + + I +A  A +      
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLR 242

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              Q+HA + K+      + G +LL+ Y K G++D+A  +F+ +  KD V++SA+++GY 
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G  E A  +++++ +  V+P+  T  S+I AC+   AA++ G+  H   I   L +  
Sbjct: 303 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH-LAALQHGRCSHGSVIIRGLASET 361

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            + +AL+ MY+K G I+ + +VF     RD+VSWN+MI GY  HG  K+A  +F EM   
Sbjct: 362 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 421

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
               DG+TFI +++AC+H+GLV EG+ +F +M + + + P MEHY CMVDL SR G L++
Sbjct: 422 GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDE 481

Query: 636 AMDIINRMPFAASATVWRTVLAACRLI--------------SLQPHDSAIYVLLSNMYAA 681
           A + I  MP  A   VW  +L ACR+                L P  +  +VLLSN+Y+A
Sbjct: 482 AYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 541

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
            G + E A VR +   +  KK  G SWIE+    ++F+ GD SHPQS +IY +L+ +   
Sbjct: 542 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVG 601

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +K  GY+PDTS+VLQD+++E KE  L  HSE+LAIA+G+++      + + KNLRVCGDC
Sbjct: 602 IKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDC 661

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           HTVIK IS ++RR I+VRD NRFHHFK G CSCGD+W
Sbjct: 662 HTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 252/496 (50%), Gaps = 27/496 (5%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T    LK C  L DH  GR +H   + +G   D+ VST+L+D+Y++   + D   +F  M
Sbjct: 12  TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLE--LFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
              ++V+W ++L+GYA + M    +   L  +MQ+  ++PN+ T   +L +LA +G +A 
Sbjct: 72  PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131

Query: 198 AVQVHTMVI-------KNGGEVVTS---VCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
              VH   I       +N    +T    +  AL+ MY K   +  AR VFD M  R+ +T
Sbjct: 132 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 191

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           W++++ G+V      +AF  F  M   G   L+ ++  S ++ CA+   LR+  QLH+ +
Sbjct: 192 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 251

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            K+G+  D      L+  Y+K G ++ A  +F  M  +KD VS++A++SG++QNG  + A
Sbjct: 252 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM-AVKDTVSYSALVSGYVQNGRAEEA 310

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNA 422
              F +M    V P+  T   ++ A   ++  Q     H  +I        S+  AL++ 
Sbjct: 311 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 370

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G +D + +VF ++  +DIV+W+ M+AGY   G  + A  ++ ++ + G  P+  TF
Sbjct: 371 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 430

Query: 483 SSVINACTAPSAAVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
             +++AC+     +E    FH       +  ++ + +C    +V + S+ G ++ A E  
Sbjct: 431 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC----MVDLLSRGGFLDEAYEFI 486

Query: 539 KRQRKR-DLVSWNSMI 553
           +    R D+  W +++
Sbjct: 487 QSMPLRADVRVWVALL 502



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 165/347 (47%), Gaps = 9/347 (2%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST-LS 82
           S  Y+++   +FD  P RN V ++ L+  +   S   +A  LF  +   GL     T ++
Sbjct: 173 SLLYARR---VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA 229

Query: 83  SVLKTCGCLFDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           S L+ C  L DH+  G Q+H    KSG   D+    SL+ +Y +   ++    +FD+M  
Sbjct: 230 SALRACASL-DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            + VS+++L+SGY +N   +    +F +MQ   ++P++ T  +++   +    +      
Sbjct: 289 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 348

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  VI  G    TS+CNALI MY K   +  +R VF+ M  RD ++WN+M+AGY  + L 
Sbjct: 349 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 408

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            EA   F  M   G      TF+ ++  C+ +  L +  +    V+ +G      +   +
Sbjct: 409 KEATALFLEMNNLGFPPDGVTFICLLSACSHSG-LVIEGKHWFHVMGHGYGLTPRMEHYI 467

Query: 322 MVA--YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            +    S+ G +++A +    M    DV  W A++        IDL 
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLG 514



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 143/288 (49%), Gaps = 19/288 (6%)

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M R  V PN +T+   L A  A++       +H H I    +    V TALL+ YVK   
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK--IYRQLTSEGVKPNEFTFSSVI 486
           L +AA +F  +  +D+VAW+AMLAGYA  G    AV   +  Q+    ++PN  T  +++
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 487 NACTAPSAAVEQGKQFHACSIKA----------KLNNALCVSSALVTMYSKKGNIESASE 536
               A   A+ QG   HA  I+A          KL + + + +AL+ MY+K G++  A  
Sbjct: 121 -PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG-VITACTHAG 595
           VF     R+ V+W+++I G+       +A  +FK M  Q L F   T I   + AC    
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            +  G+Q   ++     ++  +   + ++ +Y++AG++++A+ + + M
Sbjct: 240 HLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/620 (38%), Positives = 359/620 (57%), Gaps = 47/620 (7%)

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R +FD +  ++ + +N M+  YV N L+ +A   F NM   G +    T+  V+K  + +
Sbjct: 91  RHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGS 150

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           ++L +  Q+H+ V++ G+D +  +  GL+  Y KCG + +A ++   M   +DVVSW ++
Sbjct: 151 EDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQM-PCRDVVSWNSL 209

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF 413
           ++G  +NG  D A+    +M   G++P+  T + +L   PAV+                 
Sbjct: 210 VAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLL---PAVT----------------- 249

Query: 414 SVGTALLN-AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
              T L N ++VK+        +F  +  K +V+W+ M+A Y        AV I+ Q+  
Sbjct: 250 --NTCLDNVSFVKE--------MFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMED 299

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
             V P+  + +SV+ AC   SA +  G++ H   ++ +L   L + +AL+ MY+K G +E
Sbjct: 300 HAVDPDAISIASVLPACGDLSALL-LGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLE 358

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            A EVF + + RD+VSW SMI  Y  +G  + A+ +F  M+   L  D I F+ V++AC+
Sbjct: 359 YAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACS 418

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           HAGL+DEG+ YF +M  E  I P +EH+ CMVDL  RAG +++A   I +MP   +  VW
Sbjct: 419 HAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVW 478

Query: 653 RTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
             +L+ACR              L  L P  S  YVLLSN+YA  G W++   VR +M  +
Sbjct: 479 GALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTK 538

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
            +KK  G S  E+ N+ ++FLAGD SHPQS QIY +L+    ++K+AGY P+T   L D+
Sbjct: 539 GIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDV 598

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           ++E KE  L+ HSE+LAIAF ++ T  G+P++I KNLRVCGDCH   KLISK+  R+I +
Sbjct: 599 EEEDKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITI 658

Query: 819 RDTNRFHHFKEGLCSCGDYW 838
           RDTNRFHHF  G+CSCGDYW
Sbjct: 659 RDTNRFHHFYNGVCSCGDYW 678



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 206/461 (44%), Gaps = 73/461 (15%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P++N V +N ++  Y  + L+ +AL +F  +   G+     T   VLK      D
Sbjct: 93  IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 152

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H   V+ G   +V V   L+ +Y +   + +  RV D M   +VVSW SL++G
Sbjct: 153 LWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAG 212

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            ARN   D  LE+   M++ G+KP++ T +++L                          V
Sbjct: 213 CARNGQFDDALEVCKEMELLGLKPDAGTMASLL------------------------PAV 248

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T+ C   +S           + +F  + ++  ++WN M+A Y+ N +  EA + F  M  
Sbjct: 249 TNTCLDNVSF---------VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMED 299

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              +    +  SV+  C     L L R++H  V++  +  +  +   L+  Y+KCG +E 
Sbjct: 300 HAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEY 359

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M+  +DVVSWT+MIS +  NG    AV+ F +M   G+ P+   +  +L+A  
Sbjct: 360 AREVFDQMK-FRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACS 418

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----DIVAWS 448
                  HA                        G+LDE    F+L+ E+      I  + 
Sbjct: 419 -------HA------------------------GLLDEGRYYFKLMTEECKIVPRIEHFV 447

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            M+    + G  + A    +Q+  E   PNE  + ++++AC
Sbjct: 448 CMVDLLGRAGQVDEAYGFIKQMPME---PNERVWGALLSAC 485



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 173/391 (44%), Gaps = 54/391 (13%)

Query: 388 ILTAQPAVSPFQ-VHAHI-IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           IL   P +   + +H+ I I  +   + S+G  L+ AY   G       +F+ I +K++V
Sbjct: 44  ILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVV 103

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            ++ M+  Y        A+ +++ +   G+ P+ +T+  V+ A ++ S  +  G Q HA 
Sbjct: 104 FFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKA-SSGSEDLWVGMQIHAA 162

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            ++  L+  + V + L++MY K G +  A  V  +   RD+VSWNS++ G A++G    A
Sbjct: 163 VVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDA 222

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGL--VDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           LEV KEM    L+ D  T   ++ A T+  L  V   ++ F  + N+     ++  ++ M
Sbjct: 223 LEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANK-----SLVSWNVM 277

Query: 624 VDLYSRAGMLEKAMDIINRMPFAA---SATVWRTVLAACRLIS----------------L 664
           + +Y    M  +A+DI  +M   A    A    +VL AC  +S                L
Sbjct: 278 IAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRL 337

Query: 665 QPHDSAIYVLLSN----MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           QP+     +LL N    MYA  G  +    V   M  R V      SW  +         
Sbjct: 338 QPN-----LLLENALIDMYAKCGCLEYAREVFDQMKFRDV-----VSWTSM--------- 378

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
             IS    N        L +R++D G  PD+
Sbjct: 379 --ISAYGMNGKGRDAVSLFSRMQDLGLNPDS 407



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F +   ++ V +N ++  Y  +S+  EA+++FL +    +     +++SVL  CG L
Sbjct: 260 KEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDL 319

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              + GR++H   V+     ++ +  +L+D+Y +   +E  R VFD M   +VVSWTS++
Sbjct: 320 SALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMI 379

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           S Y  N      + LF RMQ  G+ P+S  F +VL   +  G++
Sbjct: 380 SAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLL 423


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/639 (38%), Positives = 358/639 (56%), Gaps = 23/639 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LIS Y K   V  AR VFD M  R++++ N +++GY ++  H E+ +    +     E
Sbjct: 49  NNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQLLRVVDFGMNE 108

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
              S  VS     A  +   + RQ H   +K G      +   ++  Y +C  MEDASK+
Sbjct: 109 YVLSAAVSAT---ANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKV 165

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQP 393
           F  +    D  ++ +MI+G+L  G +D ++     MT E  + +  +Y  +L    + + 
Sbjct: 166 FESVSGF-DAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKD 224

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
           +V   QVHA  +K   E +  VG+AL++ Y K   + +A + FE++ EK++V+W+A++  
Sbjct: 225 SVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTA 284

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    E A++++  +  EGV+PNEFT++  +N+C A  AA+  G    AC +K    +
Sbjct: 285 YTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSC-AGLAALRTGNALGACVMKTGHWD 343

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            L VS+AL+ MYSK G+IE A  VF     RD+VSWN +I GYA HG  ++ +E F  M 
Sbjct: 344 HLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSML 403

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +    +TF+GV++AC   GLVDE   Y + M+ E  I P  EHY+CMV L  R G L
Sbjct: 404 SAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRL 463

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
           ++A   I           WR++L +C+              ++ L+P D   YVLLSNMY
Sbjct: 464 DEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMY 523

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A    W    +VRK M +R V+K  G SWI V +  + F + +  HPQ +QI  KLEEL 
Sbjct: 524 AKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELI 583

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            ++K  GY P+ + VL DIDDE KE  L  HSE+LA+AFGL+ TP GA + I+KNLR+C 
Sbjct: 584 DQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICD 643

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH  IKLIS +  R IVVRD  RFH  + G+CSC DYW
Sbjct: 644 DCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCNDYW 682



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 223/462 (48%), Gaps = 10/462 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +H   + +    DV +  +L+  Y +   V   R VFD M   N VS   L+SGYA 
Sbjct: 30  GKALHARLITAAHF-DVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYAS 88

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +  +   L+L   ++V     N +  S  +   A+        Q H   +K G      V
Sbjct: 89  SGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYV 145

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            NA++ MY +   + DA  VF+ +   D+  +NSM+ GY+       +     NM     
Sbjct: 146 FNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAE 205

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    ++V+V+  CA+ K+  L  Q+H+Q LK  ++ +  + + L+  Y KC  + DA++
Sbjct: 206 KWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANR 265

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
            F ++ E K+VVSWTA+++ + QN   + A+  F  M  EGV+PN FTY++ L +   ++
Sbjct: 266 AFEVLPE-KNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLA 324

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             +    + A ++KT +     V  AL+N Y K G +++A +VF  +  +D+V+W+ ++ 
Sbjct: 325 ALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIIT 384

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GYA  G     ++ +  + S  V P+  TF  V++AC       E     +    +  + 
Sbjct: 385 GYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGIT 444

Query: 513 NALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMI 553
                 + +V +  + G ++ A   +       D+V+W S++
Sbjct: 445 PGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLL 486



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 205/427 (48%), Gaps = 12/427 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD  P RN V  N L+  Y     H+E+L L   +R +   +    LS+ +     +
Sbjct: 65  RTVFDAMPFRNAVSANLLMSGYASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANV 121

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             +  GRQ H   VK+GFA    V  +++ +Y +  ++ED  +VF+ ++  +  ++ S++
Sbjct: 122 RSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMI 181

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY      D  L +   M  E  K +  ++  VLG  A         QVH   +K   E
Sbjct: 182 NGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLE 241

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V +AL+ MY K   V DA   F+ + +++ ++W +++  Y  NEL+ +A + F +M
Sbjct: 242 LNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDM 301

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSKCGK 330
            + G +    T+   +  CA    LR    L + V+K G  +DH  +   LM  YSK G 
Sbjct: 302 EMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTG-HWDHLLVSNALMNMYSKSGS 360

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +EDA ++F  M  ++DVVSW  +I+G+  +G     +  F  M    V P+  T+  +L+
Sbjct: 361 IEDAHRVFISM-PLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLS 419

Query: 391 AQPAVSPFQVHAHIIKTNY-EKSFSVG----TALLNAYVKKGILDEAAK-VFELIDEKDI 444
           A   +       + + T   E   + G    T ++    + G LDEA + +       D+
Sbjct: 420 ACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDV 479

Query: 445 VAWSAML 451
           VAW ++L
Sbjct: 480 VAWRSLL 486



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 147/274 (53%), Gaps = 1/274 (0%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           +VL  C  + D V G QVH + +K     +V V ++LVD+Y + ++V D  R F+ + E 
Sbjct: 214 AVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEK 273

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           NVVSWT++++ Y +N++ +  L+LF  M++EG++PN FT++  L   A    + T   + 
Sbjct: 274 NVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALG 333

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             V+K G      V NAL++MY KS  + DA  VF  M  RD ++WN ++ GY  + L  
Sbjct: 334 ACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAR 393

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGL 321
           E  E F++M  A    +  TFV V+  CA    +  A    + ++K  GI       T +
Sbjct: 394 EGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCM 453

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           +    + G++++A +         DVV+W ++++
Sbjct: 454 VGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLN 487


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 223/532 (41%), Positives = 337/532 (63%), Gaps = 21/532 (3%)

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KCG + DA  +F  M   +DVVSWT +I+G+ QN     A+     M R   RPNGFT
Sbjct: 2   YCKCGAVSDARHVFDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           ++ +L A  A        Q+HA  +K N+++   VG+ALL+ Y +   +D A  VF+ + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            K+ V+W+A++AG+A+  D E  +  + ++   G     FT+SS+ +A  A   A+EQG+
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSA-FARIGALEQGR 179

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
             HA  IK+       V + ++ MY+K G++  A +VF R  KRDLV+WN+M+   AQ+G
Sbjct: 180 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 239

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             K+A+  F+E+R+  ++ + ITF+ V+TAC+H GLV EG+ YFD+M  ++++ P ++HY
Sbjct: 240 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHY 298

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQP 666
              VDL  RAG+L++A+  + +MP   +A VW  +L ACR+                L P
Sbjct: 299 VSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDP 358

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            D+   VLL N+YA+TG W + ARVRK+M    VKKE   SW++++N  + F+A D +HP
Sbjct: 359 DDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHP 418

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           +S  IY   EE++ R+K AGY P+T++VL  I+++ +E  L  HSE++A+AF L+  PAG
Sbjct: 419 KSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAG 478

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           A ++I+KN+R+CGDCH+  K +SK+ +R+IVVRDTNRFHHF EG CSCGDYW
Sbjct: 479 ASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+ P R+ V +  L+  Y ++ +  EA+ L   + R      G T +S+LK  G  
Sbjct: 12  RHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGAC 71

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H   VK  +  DV V ++L+D+Y R   ++    VFD +   N VSW +L+
Sbjct: 72  GGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALI 131

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+AR    +  L  F  MQ  G     FT+S++    A  G +     VH  +IK+G +
Sbjct: 132 AGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQK 191

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N ++ MY KS  + DAR VFD M+ RD +TWN+M+       L  EA   F  +
Sbjct: 192 LTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEI 251

Query: 272 GLAGAELTRSTFVSVIKLCA 291
              G +L + TF+SV+  C+
Sbjct: 252 RKCGIQLNQITFLSVLTACS 271



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 6/336 (1%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +   V D R VFD M   +VVSWT L++GYA+N M    + L   M     +PN FT
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F+++L      G  +   Q+H + +K   +    V +AL+ MY + + +  A  VFD + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            ++ ++WN+++AG+            F  M   G   T  T+ S+    A    L   R 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H+ ++K+G      +   ++  Y+K G M DA K+F  M + +D+V+W  M++   Q G
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM-DKRDLVTWNTMLTALAQYG 239

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT----NYEKSFSVGT 417
               AV  F ++ + G++ N  T+  +LTA       +   H        N +       
Sbjct: 240 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYV 299

Query: 418 ALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLA 452
           + ++   + G+L EA   VF++  E     W A+L 
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLG 335



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 82/162 (50%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR   +N V +N L+  + R +  +  L  F  ++R G      T SS+      +  
Sbjct: 115 VFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGA 174

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR VH   +KSG      V  +++ +Y ++ ++ D R+VFD M++ ++V+W ++L+ 
Sbjct: 175 LEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTA 234

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            A+  +    +  F  ++  GI+ N  TF +VL   +  G+V
Sbjct: 235 LAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLV 276



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 8/138 (5%)

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY K G +  A  VF +   RD+VSW  +I GYAQ+    +A+ +  +M R     +G T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
           F  ++ A    G    G+Q   + V    +  +Y      S ++D+Y+R   ++ A+ + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVG----SALLDMYARCEQMDMAIMVF 116

Query: 641 NRMPFAASATVWRTVLAA 658
           +R+  + +   W  ++A 
Sbjct: 117 DRL-VSKNEVSWNALIAG 133


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/658 (36%), Positives = 382/658 (58%), Gaps = 54/658 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT-RSTFVSVIKLCA 291
           A+ VFD +   +  TWN+++  Y ++    ++   F  M     +   + TF  +IK  +
Sbjct: 88  AQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAAS 147

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
             +EL   +  H  V+K  +  D  I   L+  Y+KCG++    ++F  +   +DVVSW 
Sbjct: 148 ELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPR-RDVVSWN 206

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
           +MI+  +Q G  + A+  F +M  + V+PNG T   +L+A    S F+    VH++I + 
Sbjct: 207 SMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN 266

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
              +S ++  A+L+ Y K G +++A ++F+ + EKDIV+W+ ML GYA+IG+ + A  I+
Sbjct: 267 RIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIF 326

Query: 468 RQLTSEGV--------------------------------KPNEFTFSSVINACTAPSAA 495
             + ++ +                                KP+E T  S ++AC A   A
Sbjct: 327 DAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSAC-AQLGA 385

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++ G   H    K  +     ++++L+ MY K G+++ A  VF    ++D+  W++MI G
Sbjct: 386 MDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAG 445

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            A HGH K A+ +F +M+   ++ + +TF  ++ AC+H GLV+EG+ +F+ M   + + P
Sbjct: 446 LAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLP 505

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RL 661
            ++HY+CMVD+  RAG+LE+A+++I +MP A +A+VW  +L AC              +L
Sbjct: 506 GVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQL 565

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           I L+P +   YVLLSN+YA  G W   + +RKLM D  +KKE G S IEV    + FL G
Sbjct: 566 IELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVG 625

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH-KEAILSQHSERLAIAFGL 780
           D SHP + +IY+KL+E+  RL+  GY P+ S++LQ +++E  KE  L  HSE+LAIAFGL
Sbjct: 626 DNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGL 685

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++T    P++IVKNLRVCGDCH+V KL+SKL  R+I++RD  RFHHF+EG CSC DYW
Sbjct: 686 ISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 188/404 (46%), Gaps = 39/404 (9%)

Query: 24  SPFYS-KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--T 80
           SPF S    Q +FD+ P  N   +N L+  Y   S   ++L +FL +     P F    T
Sbjct: 80  SPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQS-PDFPDKFT 138

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
              ++K    L +   G+  H   +K     DV +  SL+  Y +   +  G RVF ++ 
Sbjct: 139 FPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIP 198

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             +VVSW S+++ + +    +  LELF  M+ + +KPN  T   VL   A +        
Sbjct: 199 RRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRW 258

Query: 201 VHTMVIKNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT-- 257
           VH+ + +N  GE +T + NA++ MY K   V DA+ +FD M ++D ++W +M+ GY    
Sbjct: 259 VHSYIERNRIGESLT-LSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIG 317

Query: 258 --------------------NEL---------HMEAFETFNNMGLAG-AELTRSTFVSVI 287
                               N L           EA E F+ + L+  A+    T VS +
Sbjct: 318 EYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTL 377

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
             CA    + L   +H  + K G+  + ++ T L+  Y KCG ++ A  +F  + E KDV
Sbjct: 378 SACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSV-ERKDV 436

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             W+AMI+G   +G    A+  F +M  + V+PN  T++ IL A
Sbjct: 437 FVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCA 480



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 142/269 (52%), Gaps = 18/269 (6%)

Query: 399 QVHAHIIKTN-----YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
           Q+HA +++T      +  S  +  A L+ +     LD A +VF+ I   ++  W+ ++  
Sbjct: 53  QIHAQMLRTGLFFDPFSASRLITAAALSPFPS---LDYAQQVFDQIPHPNLYTWNTLIRA 109

Query: 454 YAQIGDTEGAVKIY-RQLTSEGVKPNEFTFSSVINACTAPSAAVEQ---GKQFHACSIKA 509
           YA   +   ++ I+ R L      P++FTF  +I A    ++ +E+   GK FH   IK 
Sbjct: 110 YASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKA----ASELEELFTGKAFHGMVIKV 165

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L + + + ++L+  Y+K G +     VF    +RD+VSWNSMI  + Q G  ++ALE+F
Sbjct: 166 LLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELF 225

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           +EM  Q+++ +GIT +GV++AC      + G ++    +  + I  ++   + M+D+Y++
Sbjct: 226 QEMETQNVKPNGITMVGVLSACAKKSDFEFG-RWVHSYIERNRIGESLTLSNAMLDMYTK 284

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G +E A  + ++MP       W T+L  
Sbjct: 285 CGSVEDAKRLFDKMP-EKDIVSWTTMLVG 312


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/692 (35%), Positives = 388/692 (56%), Gaps = 56/692 (8%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---ARAVFDGMEDRDSITWNSMVAGYVT 257
           +H  +IK G        + LI   + S        A +VF+ +++ + + WN+M  G+  
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +   + A   +  M   G      TF  ++K CA +K  R  +Q+H  VLK G D D  +
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 318 RTGLMVAYSKCGKMEDASKIFS----------------------------MMREM--KDV 347
            T L+  Y + G++EDA K+F                             M  E+  KDV
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           VSW AMISG+ + G    A+  F +M +  VRP+  T   +++A    +      QVH+ 
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I    +  +  +  AL++ Y+K G ++ A  +FE +  KD+++W+ ++ GY  +   + A
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN---NALCVSSA 520
           + +++++   G  PN+ T  S++ AC A   A+E G+  H   I  +L    NA    ++
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPAC-AHLGAIEIGRWIHV-YINKRLKGVANASSHRTS 363

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+ MY+K G+IE+A +VF     R L SWN+MI G+A HG    A ++F  MR+ ++E D
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 423

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITF+G+++AC+H+G++D G+  F  M  ++ I P +EHY CM+DL   +G+ ++A ++I
Sbjct: 424 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
           N M       +W ++L AC+              LI ++P +   YVLLSN+YA  G W 
Sbjct: 484 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 543

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           E A++R L+ND+ +KK  G S IE+ +  + F+ GD  HP++ +IY  LEE+   L++AG
Sbjct: 544 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 603

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           + PDTS VLQ++++E KE  L  HSE+LAIAFGL++T  G  L IVKNLRVC +CH   K
Sbjct: 604 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 663

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LISK+ +R+I+ RD  RFHHF++G+CSC DYW
Sbjct: 664 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 234/522 (44%), Gaps = 51/522 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N +   +   S    AL L++ +  LGL     T   +LK+C    
Sbjct: 43  SVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSK 102

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+Q+H   +K G+  D+ V TSL+ +Y++   +ED R+VFD  +  +VVS+T+L++
Sbjct: 103 AFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIT 162

Query: 153 GYAR-------NKMNDRV------------------------LELFHRMQVEGIKPNSFT 181
           GYA         KM D +                        LELF  M    ++P+  T
Sbjct: 163 GYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDEST 222

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             +V+   A    +    QVH+ +  +G      + NALI +Y+K   V  A  +F+G+ 
Sbjct: 223 MVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS 282

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN+++ GY    L+ EA   F  M  +G      T +S++  CA    + + R 
Sbjct: 283 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 342

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    + RT L+  Y+KCG +E A ++F  +   + + SW AMI G   
Sbjct: 343 IHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILN-RSLSSWNAMIFGFAM 401

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL 419
           +G  + A + F +M +  + P+  T+  +L+A        +  HI ++  E  + +   L
Sbjct: 402 HGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE-DYKITPKL 460

Query: 420 ------LNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                 ++     G+  EA ++   ++ E D V W ++L      G+ E      + L  
Sbjct: 461 EHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIK 520

Query: 473 -EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
            E   P  +   S I A          G+      I+A LN+
Sbjct: 521 IEPKNPGSYVLLSNIYATA--------GRWNEVAKIRALLND 554



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 204/400 (51%), Gaps = 50/400 (12%)

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKC------GKMEDASKIFSMMREMKDVVSWTAM 353
           R +H+Q++K G+   HN    L      C        +  A  +F  ++E  +++ W  M
Sbjct: 4   RMIHAQMIKTGL---HNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE-PNLLIWNTM 59

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
             GH  +     A+  +  M   G+ PN +T+  +L +      F    Q+H H++K  Y
Sbjct: 60  FRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGY 119

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFE----------------------------LIDE 441
           +    V T+L++ YV+ G L++A KVF+                            + DE
Sbjct: 120 DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDE 179

Query: 442 ---KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
              KD+V+W+AM++GYA+ G+ + A+++++++    V+P+E T  SV++AC A SA++E 
Sbjct: 180 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC-AQSASIEL 238

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G+Q H+        + L + +AL+ +Y K G +E+A  +F+    +D++SWN++I GY  
Sbjct: 239 GRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTH 298

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH--HIYPT 616
               K+AL +F+EM R     + +T + ++ AC H G ++ G ++  + +N+    +   
Sbjct: 299 MNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG-RWIHVYINKRLKGVANA 357

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
             H + ++D+Y++ G +E A  + + +    S + W  ++
Sbjct: 358 SSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMI 396



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 158/346 (45%), Gaps = 3/346 (0%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y    Q +FD  P ++ V +N ++  Y     ++EAL LF  + +  +    ST+ SV+ 
Sbjct: 169 YIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVS 228

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        GRQVH      GF  ++ +  +L+DLY++   VE    +F+ ++  +V+S
Sbjct: 229 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS 288

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +L+ GY    +    L LF  M   G  PN  T  ++L   A  G +     +H  + 
Sbjct: 289 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYIN 348

Query: 207 K--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           K   G    +S   +LI MY K   +  A+ VFD + +R   +WN+M+ G+  +     A
Sbjct: 349 KRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAA 408

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV- 323
           F+ F+ M     E    TFV ++  C+ +  L L R +   + ++          G M+ 
Sbjct: 409 FDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMID 468

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
                G  ++A ++ + M    D V W +++     +G ++L  ++
Sbjct: 469 LLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESY 514


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/640 (37%), Positives = 366/640 (57%), Gaps = 25/640 (3%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L + Y    ++  A  +FDG+  ++S  WN M+ GY +N L M++   +  M   G    
Sbjct: 101 LAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRAD 160

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             T+  V+K C     + + R++HS+V+  G++ D  +   L+  Y+K G M  A  +F 
Sbjct: 161 NFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFD 220

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
            M E +D+ SW  MISG+ +N     A   F  M + G+  +  T   +L+A   +   +
Sbjct: 221 RMAE-RDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVK 279

Query: 400 ----VHAHIIKT---NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
               +H + ++    NY K F+   +L+  Y     + +A ++FE +  KD V+W++M+ 
Sbjct: 280 EGKVIHGYAVRNSIGNYNKFFT--NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMIL 337

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GYA+ GD   +++++R++  +G  P++ TF +V+ AC    AA+  G   H+  +K   +
Sbjct: 338 GYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQI-AALRYGMSIHSYLVKKGFD 396

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               V +ALV MYSK G++  +  VF     + LVSW++M+ GY  HG  ++A+ +   M
Sbjct: 397 ANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGM 456

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           +   +  D   F  +++AC+HAGLV EG++ F  M  E+++ P + HYSCMVDL  RAG 
Sbjct: 457 KANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGH 516

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNM 678
           L++A  II  M    ++ +W  +L A RL                + P   + Y+ LSN+
Sbjct: 517 LDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNI 576

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           YAA   W +  RVR ++  + +KK  G S+IE+ N  + FL GD SH Q+  IY+KL EL
Sbjct: 577 YAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNEL 636

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
             +LK+AGYKPDTS V  D+++E KE +L  HSERLAIAF L+ T  G  ++I KNLRVC
Sbjct: 637 KQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVC 696

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCHTV KLIS+L  R+I++RD +RFHHF +G CSCGDYW
Sbjct: 697 GDCHTVTKLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 209/430 (48%), Gaps = 14/430 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD    +N   +N ++  Y  + L  ++L L+  +   G      T   VLK CG L
Sbjct: 115 EVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDL 174

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR+VH E V  G   D+ V  SL+ +Y +  ++   R VFD M E ++ SW +++
Sbjct: 175 LLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMI 234

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-G 210
           SGYA+N  +     +F  M   G+  +  T   +L   AD   V     +H   ++N  G
Sbjct: 235 SGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIG 294

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                  N+LI MY     + DAR +F+ +  +D+++WNSM+ GY  N    E+   F  
Sbjct: 295 NYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRR 354

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L G+   + TF++V+  C     LR    +HS ++K G D +  + T L+  YSKCG 
Sbjct: 355 MALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGS 414

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +  + ++F  M + K +VSW+AM++G+  +G    A++    M    V P+   ++ IL+
Sbjct: 415 LACSRRVFDEMPD-KSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILS 473

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTAL------LNAYVKKGILDEA---AKVFELIDE 441
           A  + +   V    I    EK ++V  AL      ++   + G LDEA    +  E+   
Sbjct: 474 A-CSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPT 532

Query: 442 KDIVAWSAML 451
            DI  W+A+L
Sbjct: 533 SDI--WAALL 540



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 160/340 (47%), Gaps = 12/340 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDR  +R+   +N ++  Y +++    A  +F  + + GL    +TL  +L  C  L  
Sbjct: 218 VFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKA 277

Query: 94  HVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              G+ +H   V++     +   + SL+++Y   N + D RR+F+ +   + VSW S++ 
Sbjct: 278 VKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMIL 337

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GYARN      L LF RM ++G  P+  TF  VLG       +   + +H+ ++K G + 
Sbjct: 338 GYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDA 397

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            T V  AL+ MY K   +  +R VFD M D+  ++W++MVAGY  +    EA    + M 
Sbjct: 398 NTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMK 457

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL-----MV-AYS 326
                     F S++  C+    +   +++  ++ K     ++N++  L     MV    
Sbjct: 458 ANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEK-----EYNVKPALSHYSCMVDLLG 512

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           + G +++A  I   M        W A+++    +  I LA
Sbjct: 513 RAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLA 552



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 9/170 (5%)

Query: 493 SAAVEQGKQFHACSIK-AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
           + + +QG+Q HA  I  + L N   +++ L   Y+  G +  A  +F     ++   WN 
Sbjct: 72  TKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNF 131

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN-- 609
           MI GYA +G   K+L +++EM       D  T+  V+ AC    LV+ G++    +V   
Sbjct: 132 MIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCG 191

Query: 610 -EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            E  IY      + ++ +Y++ G +  A  + +RM      T W T+++ 
Sbjct: 192 LESDIYVG----NSLLAMYAKFGDMGTARMVFDRMA-ERDLTSWNTMISG 236


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/692 (35%), Positives = 388/692 (56%), Gaps = 56/692 (8%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---ARAVFDGMEDRDSITWNSMVAGYVT 257
           +H  +IK G        + LI   + S        A +VF+ +++ + + WN+M  G+  
Sbjct: 21  IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +   + A   +  M   G      TF  ++K CA +K  R  +Q+H  VLK G D D  +
Sbjct: 81  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 140

Query: 318 RTGLMVAYSKCGKMEDASKIFS----------------------------MMREM--KDV 347
            T L+  Y + G++EDA K+F                             M  E+  KDV
Sbjct: 141 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 200

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           VSW AMISG+ + G    A+  F +M +  VRP+  T   +++A    +      QVH+ 
Sbjct: 201 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 260

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I    +  +  +  AL++ Y+K G ++ A  +FE +  KD+++W+ ++ GY  +   + A
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN---NALCVSSA 520
           + +++++   G  PN+ T  S++ AC A   A+E G+  H   I  +L    NA    ++
Sbjct: 321 LLLFQEMLRSGESPNDVTMLSILPAC-AHLGAIEIGRWIHV-YINKRLKGVANASSHRTS 378

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+ MY+K G+IE+A +VF     R L SWN+MI G+A HG    A ++F  MR+ ++E D
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPD 438

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITF+G+++AC+H+G++D G+  F  M  ++ I P +EHY CM+DL   +G+ ++A ++I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 498

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
           N M       +W ++L AC+              LI ++P +   YVLLSN+YA  G W 
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWN 558

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           E A++R L+ND+ +KK  G S IE+ +  + F+ GD  HP++ +IY  LEE+   L++AG
Sbjct: 559 EVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 618

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           + PDTS VLQ++++E KE  L  HSE+LAIAFGL++T  G  L IVKNLRVC +CH   K
Sbjct: 619 FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LISK+ +R+I+ RD  RFHHF++G+CSC DYW
Sbjct: 679 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 233/522 (44%), Gaps = 51/522 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N +   +   S    AL L++ +  LGL     T   +LK+C    
Sbjct: 58  SVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSK 117

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+Q+H   +K G+  D+ V TSL+ +Y++   +ED R+VFD  +  +VVS+T+L++
Sbjct: 118 AFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIT 177

Query: 153 GYAR-------NKMNDRV------------------------LELFHRMQVEGIKPNSFT 181
           GYA         KM D +                        LELF  M    ++P+  T
Sbjct: 178 GYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDEST 237

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             +V+   A    +    QVH+ +  +G      + NALI +Y+K   V  A  +F+G+ 
Sbjct: 238 MVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS 297

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN+++ GY    L+ EA   F  M  +G      T +S++  CA    + + R 
Sbjct: 298 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 357

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    + RT L+  Y+KCG +E A ++F  +   + + SW AMI G   
Sbjct: 358 IHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILN-RSLSSWNAMIFGFAM 416

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL 419
           +G  + A + F +M +  + P+  T+  +L+A        +  HI ++  E  + +   L
Sbjct: 417 HGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE-DYKITPKL 475

Query: 420 ------LNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                 ++     G+  EA ++   ++ E D V W ++L       + E      + L  
Sbjct: 476 EHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIK 535

Query: 473 -EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
            E   P  +   S I A          G+      I+A LN+
Sbjct: 536 IEPKNPGSYVLLSNIYATA--------GRWNEVAKIRALLND 569



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 213/416 (51%), Gaps = 53/416 (12%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC------GKMEDASKI 337
           +S++  C T + LR+   +H+Q++K G+   HN    L      C        +  A  +
Sbjct: 6   LSLLHNCKTLQSLRM---IHAQMIKTGL---HNTNYALSKLIEFCVLSPHFDGLPYAISV 59

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  ++E  +++ W  M  GH  +     A+  +  M   G+ PN +T+  +L +      
Sbjct: 60  FETIQE-PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 118

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE---------------- 437
           F    Q+H H++K  Y+    V T+L++ YV+ G L++A KVF+                
Sbjct: 119 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 178

Query: 438 ------------LIDE---KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
                       + DE   KD+V+W+AM++GYA+ G+ + A+++++++    V+P+E T 
Sbjct: 179 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 238

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            SV++AC A SA++E G+Q H+        + L + +AL+ +Y K G +E+A  +F+   
Sbjct: 239 VSVVSAC-AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLS 297

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D++SWN++I GY      K+AL +F+EM R     + +T + ++ AC H G ++ G +
Sbjct: 298 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG-R 356

Query: 603 YFDIMVNEH--HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           +  + +N+    +     H + ++D+Y++ G +E A  + + +    S + W  ++
Sbjct: 357 WIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMI 411



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 151/331 (45%), Gaps = 3/331 (0%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y    Q +FD  P ++ V +N ++  Y     ++EAL LF  + +  +    ST+ SV+ 
Sbjct: 184 YIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVS 243

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        GRQVH      GF  ++ +  +L+DLY++   VE    +F+ ++  +V+S
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS 303

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +L+ GY    +    L LF  M   G  PN  T  ++L   A  G +     +H  + 
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYIN 363

Query: 207 K--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           K   G    +S   +LI MY K   +  A+ VFD + +R   +WN+M+ G+  +     A
Sbjct: 364 KRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAA 423

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV- 323
           F+ F+ M     E    TFV ++  C+ +  L L R +   + ++          G M+ 
Sbjct: 424 FDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMID 483

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
                G  ++A ++ + M    D V W +++
Sbjct: 484 LLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 514


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/656 (34%), Positives = 371/656 (56%), Gaps = 21/656 (3%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH  ++K G     +VCNALIS Y KS  + DA  VFD M  RD I+WNS++ G  +N L
Sbjct: 6   VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           + +A E F  M L G EL  +T +SV+  C  +    +   +H   ++ G+  + ++   
Sbjct: 66  YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  YS C      +KIF  M E K+VVSWTAMI+ + + G  D     F +M  EG+RP
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNM-EQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRP 184

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + F  +  L A       +    VH + I+   E+   V  AL+  YVK G ++EA  +F
Sbjct: 185 DVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIF 244

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           + + +KD ++W+ ++ GY++      A  ++ ++  + ++PN  T + ++ A  A  +++
Sbjct: 245 DHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPA-AASLSSL 302

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E+G++ HA +++        V++ALV MY K G +  A  +F     ++L+SW  MI GY
Sbjct: 303 ERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGY 362

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
             HG  + A+ +F++M+   ++ D  +F  ++ AC+H+GL DEG ++F+ M NEH I P 
Sbjct: 363 GMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPK 422

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------I 662
           ++HY+CMVDL    G L++A + I  MP    +++W ++L  CR+               
Sbjct: 423 LKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVF 482

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            L+P ++  YVLL+N+YA    W+   +++  +  R +++  G SWIEV+ K + F A +
Sbjct: 483 ELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAEN 542

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
            +HPQ  +I   L++++ R+++ G+ P   Y L   DD   +  L  HS +LA+AFG++ 
Sbjct: 543 RNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLN 602

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              G P+++ KN RVC  CH   K ISK+  R+I++RD+NRFHHF+EG CSC  YW
Sbjct: 603 LSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/477 (28%), Positives = 239/477 (50%), Gaps = 7/477 (1%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  VH   VK GF     V  +L+  Y ++N +ED   VFD+M + +++SW S++ G A 
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N + D+ +ELF RM +EG + +S T  +V+              VH   ++ G    TS+
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            NAL+ MY      R    +F  ME ++ ++W +M+  Y       +    F  MGL G 
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI 182

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                   S +   A  + L+  + +H   ++NGI+    +   LM  Y KCG ME+A  
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           IF  + + KD +SW  +I G+ ++   + A   F +M  + +RPN  T + IL A  ++S
Sbjct: 243 IFDHVTK-KDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLS 300

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 ++HA+ ++  Y +   V  AL++ YVK G L  A ++F+++  K++++W+ M+A
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIA 360

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GY   G    A+ ++ Q+   G++P+  +FS+++ AC+      E  + F+A   + ++ 
Sbjct: 361 GYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIE 420

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
             L   + +V +    GN++ A E  +    + D   W S++ G   H + K A +V
Sbjct: 421 PKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKV 477



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 198/371 (53%), Gaps = 7/371 (1%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY+K ++      +FD  PQR+ + +N ++     + L+ +A+ LF+ +   G  L  +T
Sbjct: 28  FYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTT 87

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L SV+  C        G  VH   V++G   + ++  +L+D+Y   ++     ++F +M 
Sbjct: 88  LLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNME 147

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           + NVVSWT++++ Y R    D+V  LF  M +EGI+P+ F  ++ L   A    +     
Sbjct: 148 QKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKS 207

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH   I+NG E V  V NAL+ MY+K   + +AR +FD +  +D+I+WN+++ GY  + L
Sbjct: 208 VHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNL 267

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EAF  FN M L        T   ++   A+   L   R++H+  ++ G   D+ +   
Sbjct: 268 ANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANA 326

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y KCG +  A ++F M+   K+++SWT MI+G+  +G    A+  F QM   G++P
Sbjct: 327 LVDMYVKCGALLLARRLFDMLTN-KNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQP 385

Query: 381 NGFTYSIILTA 391
           +  ++S IL A
Sbjct: 386 DAGSFSAILYA 396



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 91/168 (54%), Gaps = 1/168 (0%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y ++ + +FD   +++ + +N L+  Y R +L  EA  LF  +  L L     T++ +L 
Sbjct: 236 YMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILP 294

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L     GR++H   V+ G+  D  V+ +LVD+Y++   +   RR+FD +   N++S
Sbjct: 295 AAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLIS 354

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           WT +++GY  +      + LF +M+  GI+P++ +FS +L   +  G+
Sbjct: 355 WTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGL 402



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 30/175 (17%)

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G   H   +K        V +AL++ Y+K   IE A  VF    +RD++SWNS+I G A 
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA----------------GLVDE--- 599
           +G   KA+E+F  M  +  E D  T + V+ AC  +                GL+ E   
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 600 GQQYFDIMVN------EHHIYPTMEH-----YSCMVDLYSRAGMLEKAMDIINRM 643
           G    D+  N       + I+  ME      ++ M+  Y+RAG  +K   +   M
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEM 177


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 258/742 (34%), Positives = 410/742 (55%), Gaps = 34/742 (4%)

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
           M   ++   R +FD +    +  + +L+  Y+       +       +    +PN++TF 
Sbjct: 74  MICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFP 133

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
            VL   +    + +A  VH    + G      V  AL+ +Y K    R A  VF  M  R
Sbjct: 134 FVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR 193

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE--LTRSTFVSVIKLCATTKELRLARQ 301
           D + WN+M+AGY    LH +  +T   + L   +     ST V+++ L A    L   R 
Sbjct: 194 DVVAWNAMLAGYA---LHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRA 250

Query: 302 LHSQVLKNGIDFDHN----IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           +H+  ++     DH     + T L+  Y+KCG +  AS++F  M  +++ V+W+A++ G 
Sbjct: 251 VHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAM-AVRNEVTWSALVGGF 309

Query: 358 LQNGAIDLAVNFFCQMTREGV---RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE 410
           +  G +  A + F  M  +G+    P     +  L A   +S      Q+HA + K+   
Sbjct: 310 VLCGRMLEAFSLFKDMLAQGLCFLSPTSVASA--LRACANLSDLCLGKQLHALLAKSGLH 367

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
              + G +LL+ Y K G++D+A  +F+ +  KD V++SA+++GY Q G  + A +++R++
Sbjct: 368 TDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM 427

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
            +  V+P+  T  S+I AC+   AA++ GK  H   I   + +   + +AL+ MY+K G 
Sbjct: 428 QACNVQPDVATMVSLIPACSH-LAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGR 486

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           I+ + ++F     RD+VSWN+MI GY  HG  K+A  +F +M+ Q  E D +TFI +I+A
Sbjct: 487 IDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISA 546

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C+H+GLV EG+++F +M +++ I P MEHY  MVDL +R G L++A   I  MP  A   
Sbjct: 547 CSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVR 606

Query: 651 VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           VW  +L ACR              +  L P  +  +VLLSN+++A G + E A VR +  
Sbjct: 607 VWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQK 666

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           ++  KK  G SWIE+    ++F+ GD SH QS++IY +L+ +   +   GY+ DTS+VLQ
Sbjct: 667 EQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQ 726

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D+++E KE  L  HSE+LAIAFG++       + + KNLRVCGDCHTVIK ++ + +R I
Sbjct: 727 DVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAI 786

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           +VRD NRFHHFK G CSCGD+W
Sbjct: 787 IVRDANRFHHFKNGQCSCGDFW 808



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 160/586 (27%), Positives = 280/586 (47%), Gaps = 23/586 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD+ P     +YN L+  Y                RR        T   VLK C  L
Sbjct: 83  RHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSAL 142

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D    R VHC   ++G   D+ VST+LVD+Y +  +      VF  M   +VV+W ++L
Sbjct: 143 LDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAML 202

Query: 152 SGYA-RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI---- 206
           +GYA   K +D +  L   +  +   PN+ T   +L +LA  G ++    VH   +    
Sbjct: 203 AGYALHGKYSDTIACLL--LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACS 260

Query: 207 ----KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
               K+G  V T    AL+ MY K   +  A  VF+ M  R+ +TW+++V G+V     +
Sbjct: 261 LHDHKDGVLVGT----ALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRML 316

Query: 263 EAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           EAF  F +M   G   L+ ++  S ++ CA   +L L +QLH+ + K+G+  D      L
Sbjct: 317 EAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSL 376

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+K G ++ A+ +F  M  +KD VS++A++SG++QNG  D A   F +M    V+P+
Sbjct: 377 LSMYAKAGLIDQATTLFDQM-VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPD 435

Query: 382 GFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
             T   ++ A   ++  Q     H  +I        S+  AL++ Y K G +D + ++F+
Sbjct: 436 VATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFD 495

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
           ++  +DIV+W+ M+AGY   G  + A  ++  +  +  +P++ TF  +I+AC+      E
Sbjct: 496 VMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTE 555

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGY 556
             + FH  + K  +   +     +V + ++ G ++ A +  +    K D+  W +++   
Sbjct: 556 GKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGAC 615

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
             H +     +V   +++   E  G  F+ +    + AG  DE  +
Sbjct: 616 RVHKNIDLGKQVSSMIQQLGPEGTG-NFVLLSNIFSAAGRFDEAAE 660


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/576 (39%), Positives = 351/576 (60%), Gaps = 27/576 (4%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           F+S +  C    +++   Q+H+QV   GI  D  +   L+   +K   +  A  +F+ M 
Sbjct: 6   FISTLFKCRNIFQIK---QVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME 62

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPF 398
           E +D VSW+ MI G ++NG  +     F ++ R G +P+ F+   ++ A       +   
Sbjct: 63  E-RDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGR 121

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            +H+ ++K        V + L++ Y K G++D A ++F+ + +KD+V  + M+AGYA+ G
Sbjct: 122 LIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECG 181

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH--ACSIKAKLNNALC 516
               +  ++ Q+  +G  P++    +++NAC A   A+ + +  H   C+ +  L+  L 
Sbjct: 182 KPNESWVLFDQMRRDGFVPDKVAMVTIVNAC-AKLGAMNKARLVHDYVCARRYSLDVEL- 239

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
             +A++ MY+K G+I+S+ E+F R  +++++SW++MI  Y  HG  ++ALE+F  M    
Sbjct: 240 -GTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSG 298

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +  + ITFI ++ AC+HAGLVD+G Q F +M   + + P ++HY+CMVDL  RAG L++A
Sbjct: 299 IIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQA 358

Query: 637 MDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
           + +I  M       +W   L ACR              L+SLQ  +   Y+LLSN+YA  
Sbjct: 359 LRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANA 418

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G W++ A++R LM  R++KK  GY+WIEV N  Y F AGD SH +SN+IY  L+ LS +L
Sbjct: 419 GRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKL 478

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           + AGY PDT+ VL D+D+E K  IL  HSE+LAIAFGL+ATP G P++I KNLRVCGDCH
Sbjct: 479 ESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCH 538

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +  KL+S + +RDI+VRD NRFHHFKEG+CSCGDYW
Sbjct: 539 SFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 192/407 (47%), Gaps = 26/407 (6%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +QVH +   +G   D+ V+  L+ +  +  ++     +F+ M E + VSW+ ++ G+ +N
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              +R  + F  +   G KP++F+   V+    D   +     +H+ V+KNG  +   VC
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           + L+ MY K  M+ +A+ +FD M  +D +T   M+AGY       E++  F+ M   G  
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFV 199

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             +   V+++  CA    +  AR +H  V       D  + T ++  Y+KCG ++ + +I
Sbjct: 200 PDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREI 259

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M E K+V+SW+AMI  +  +G    A+  F  M   G+ PN  T+  +L A      
Sbjct: 260 FDRM-EQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACS---- 314

Query: 398 FQVHAHIIKTNYE----KSFSVG--------TALLNAYVKKGILDEAAKVFELID-EKDI 444
              HA ++    +     S S G        T +++   + G LD+A ++ E ++ EKD 
Sbjct: 315 ---HAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDE 371

Query: 445 VAWSAMLAG---YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
             W A L     + Q+   E A K+   L ++   P  +   S I A
Sbjct: 372 GIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQ--NPGHYILLSNIYA 416



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 162/334 (48%), Gaps = 1/334 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF++  +R+ V ++ ++  + ++  ++     F  + R G      +L  V+K C     
Sbjct: 57  LFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMG 116

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + GR +H   +K+G   D  V ++LVD+Y +   +++ +++FD M + ++V+ T +++G
Sbjct: 117 LIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAG 176

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA     +    LF +M+ +G  P+     T++   A  G +  A  VH  V      + 
Sbjct: 177 YAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLD 236

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +  A+I MY K   +  +R +FD ME ++ I+W++M+  Y  +    EA E F+ M  
Sbjct: 237 VELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLN 296

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKME 332
           +G    R TF+S++  C+    +    QL S + +  G+  D    T ++    + G+++
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLD 356

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            A ++   M   KD   W A +     +  +DLA
Sbjct: 357 QALRLIENMEVEKDEGIWCAFLGACRIHRQVDLA 390



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 88/174 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFDR P+++ V    ++  Y       E+  LF  +RR G       + +++  C  L
Sbjct: 156 KQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKL 215

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 R VH       ++ DV + T+++D+Y +  +++  R +FD M + NV+SW++++
Sbjct: 216 GAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMI 275

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
             Y  +      LELFH M   GI PN  TF ++L   +  G+V   +Q+ +++
Sbjct: 276 GAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLM 329


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/655 (36%), Positives = 371/655 (56%), Gaps = 51/655 (7%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H +++  G      +   L+++Y     V  +R  FD +  +D   WNSM++ YV N  
Sbjct: 38  LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97

Query: 261 HMEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
             EA   F  + L  +E+     TF  V+K C T  +    R++H    K G  ++  + 
Sbjct: 98  FHEAIGCFYQLLLV-SEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVA 153

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  YS+ G    A  +F  M   +D+ SW AMISG +QNG    A++   +M  EG 
Sbjct: 154 ASLIHMYSRFGFTGIARSLFDDM-PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG- 211

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
                                     IK N+    S+    ++ Y K G+LD A KVFE+
Sbjct: 212 --------------------------IKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEI 245

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVE 497
           I  KD+++W+ ++ GYAQ G    A+++Y+ +   + + PN+ T+ S++ A  A   A++
Sbjct: 246 IPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA-YAHVGALQ 304

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
           QG + H   IK  L+  + V++ L+ +Y K G +  A  +F +  +   V+WN++I  + 
Sbjct: 305 QGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHG 364

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
            HGH +K L++F EM  + ++ D +TF+ +++AC+H+G V+EG+  F +M  E+ I P++
Sbjct: 365 IHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSL 423

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LIS 663
           +HY CMVDL  RAG LE A D I  MP    A++W  +L ACR              L  
Sbjct: 424 KHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFE 483

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           +   +   YVLLSN+YA  G W+   +VR L  +R +KK  G+S IEV  K   F  G+ 
Sbjct: 484 VDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQ 543

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
           SHP+  +IY +L  L+ ++K  GY PD S+VLQD++++ KE IL+ HSERLAIAFG+++T
Sbjct: 544 SHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIIST 603

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           P  +P++I KNLRVCGDCH   K IS++ +R+IVVRD+NRFHHFK+G+CSCGDYW
Sbjct: 604 PPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 226/479 (47%), Gaps = 51/479 (10%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           F + +H   V +G  + + +ST LV+LY    +V   R  FD + + +V +W S++S Y 
Sbjct: 34  FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93

Query: 156 RNKMNDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            N      +  F++ + V  I+P+ +TF  VL      G +    ++H    K G +   
Sbjct: 94  HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNV 150

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  +LI MY +      AR++FD M  RD  +WN+M++G + N    +A +  + M L 
Sbjct: 151 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 210

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G ++   T VS++ +                                +  Y+K G ++ A
Sbjct: 211 GIKMNFVTVVSILPV-------------------------------FVDMYAKLGLLDSA 239

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQP 393
            K+F ++  +KDV+SW  +I+G+ QNG    A+  +  M   + + PN  T+  IL A  
Sbjct: 240 HKVFEII-PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYA 298

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            V   Q    +H  +IKTN      V T L++ Y K G L +A  +F  + ++  V W+A
Sbjct: 299 HVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNA 358

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ----FHAC 505
           +++ +   G  E  +K++ ++  EGVKP+  TF S+++AC+  S  VE+GK         
Sbjct: 359 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH-SGFVEEGKWCFRLMQEY 417

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
            IK  L +  C    +V +  + G +E A +  K    + D   W +++     HG+ +
Sbjct: 418 GIKPSLKHYGC----MVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 175/360 (48%), Gaps = 39/360 (10%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG--LPLFGSTLSSVLKTCGCLF 92
           FD+ PQ++   +N ++  Y  +    EA+  F  +  +    P F  T   VLK CG L 
Sbjct: 74  FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDF-YTFPPVLKACGTLV 132

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   GR++HC   K GF  +V V+ SL+ +Y R       R +FDDM   ++ SW +++S
Sbjct: 133 D---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMIS 189

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N    + L++   M++EGIK N  T  ++L V  D                     
Sbjct: 190 GLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVD--------------------- 228

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
                     MY K  ++  A  VF+ +  +D I+WN+++ GY  N L  EA E +  M 
Sbjct: 229 ----------MYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME 278

Query: 273 LAGAEL-TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                +  + T+VS++   A    L+   ++H +V+K  +  D  + T L+  Y KCG++
Sbjct: 279 ECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 338

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA  +F  + + +  V+W A+IS H  +G  +  +  F +M  EGV+P+  T+  +L+A
Sbjct: 339 VDAMSLFYQVPQ-ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSA 397



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 9/173 (5%)

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G +  E  F+ + ++ T    A    K  HA  + A    ++ +S+ LV +Y+  G++  
Sbjct: 14  GNQNEEIDFNFLFDSSTKTPFA----KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSL 69

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-QDLEFDGITFIGVITACT 592
           +   F +  ++D+ +WNSMI  Y  +GH  +A+  F ++    ++  D  TF  V+ AC 
Sbjct: 70  SRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC- 128

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
             G + +G++           +      S ++ +YSR G    A  + + MPF
Sbjct: 129 --GTLVDGRKIHCWAFKLGFQWNVFVAAS-LIHMYSRFGFTGIARSLFDDMPF 178


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/533 (42%), Positives = 337/533 (63%), Gaps = 19/533 (3%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y K G + DA  +F  M + ++VVSWT MIS +      D A+ F   M REGVRP
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPD-RNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRP 64

Query: 381 NGFTYSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           N FTYS +L A   +    Q+H  IIK   +    V +AL++ Y + G L+ A +VF+ +
Sbjct: 65  NMFTYSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM 124

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
              D+V WS+++AG+AQ  D + A+++++++   G    + T +SV+ ACT   A +E G
Sbjct: 125 VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL-ALLELG 183

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           +Q H   +K   +  L +++AL+ MY K G++E A+ VF R  ++D++SW++MI G AQ+
Sbjct: 184 RQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQN 241

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G++K+AL++F+ M+   ++ + +T +GV+ AC+HAGLV+EG  YF  M     I P  EH
Sbjct: 242 GYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREH 301

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y CM+DL  RAG L +A+D+IN M     A  WR +L ACR              ++ L 
Sbjct: 302 YGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLD 361

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D+  YVLLSN+YA T  W + A VR+ M +R +KKE G SWIEV  + ++F+ GD SH
Sbjct: 362 PQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSH 421

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           PQ  +I  +L +L  +L   GY PDT++VLQD++ E  +  L  HSE+LAI FGL++ P 
Sbjct: 422 PQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPR 481

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           G  ++I KNLR+CGDCH   KL++K+E+R IV+RD  R+HHF++GLCSCGD+W
Sbjct: 482 GQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 191/364 (52%), Gaps = 11/364 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LI+MY+K  ++ DA+ VFD M DR+ ++W +M++ Y   +L+ +A E    M   G  
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               T+ SV++ C     L   RQLH  ++K G+D D  +R+ L+  YS+ G++E+A ++
Sbjct: 64  PNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M    D+V W+++I+G  QN   D A+  F +M R G      T + +L A   ++ 
Sbjct: 121 FDEM-VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLAL 179

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                QVH H++K  Y++   +  ALL+ Y K G L++A  VF  + EKD+++WS M+AG
Sbjct: 180 LELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG 237

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
            AQ G ++ A+K++  +   G+KPN  T   V+ AC+      E    FH+      ++ 
Sbjct: 238 LAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDP 297

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
                  ++ +  + G +  A ++      + D V+W +++     H +   A+   K++
Sbjct: 298 GREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQI 357

Query: 573 RRQD 576
            R D
Sbjct: 358 LRLD 361



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/346 (34%), Positives = 182/346 (52%), Gaps = 26/346 (7%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+++Y++   + D + VFD M + NVVSWT+++S Y+  K+ND+ LE    M  EG++PN
Sbjct: 6   LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
            FT+S+VL   A +G+     Q+H  +IK G +    V +ALI +Y +   + +A  VFD
Sbjct: 66  MFTYSSVLR--ACDGLFNLR-QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD 122

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M   D + W+S++AG+  N    EA   F  M  AG    ++T  SV++ C     L L
Sbjct: 123 EMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLEL 182

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            RQ+H  VLK   D D  +   L+  Y KCG +EDA+ +F  M E KDV+SW+ MI+G  
Sbjct: 183 GRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVE-KDVISWSTMIAGLA 239

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT------NYEKS 412
           QNG    A+  F  M   G++PN  T   +L A         HA +++       + ++ 
Sbjct: 240 QNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACS-------HAGLVEEGLYYFHSMKEL 292

Query: 413 FSVGTA------LLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAML 451
           F +         +++   + G L EA  +  E+  E D V W A+L
Sbjct: 293 FGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALL 338



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 190/369 (51%), Gaps = 29/369 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +FD+ P RN V +  ++  Y    L+ +AL   + + R G+     T SSVL+ C  L
Sbjct: 20  QDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGL 79

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           F+    RQ+HC  +K G   DV V ++L+D+Y R   +E+  RVFD+M   ++V W+S++
Sbjct: 80  FNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSII 136

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+A+N   D  L LF RM+  G      T ++VL       ++    QVH  V+K   +
Sbjct: 137 AGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYDQD 196

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           ++ +  NAL+ MY K   + DA AVF  M ++D I+W++M+AG   N    EA + F +M
Sbjct: 197 LILN--NALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESM 254

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT-----------G 320
            + G +    T V V+  C+           H+ +++ G+ + H+++            G
Sbjct: 255 KVLGIKPNYVTIVGVLFACS-----------HAGLVEEGLYYFHSMKELFGIDPGREHYG 303

Query: 321 LMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            M+    + G++ +A  + + M    D V+W A+++    +  +D+A++   Q+ R   +
Sbjct: 304 CMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQ 363

Query: 380 PNGFTYSII 388
             G TY ++
Sbjct: 364 DAG-TYVLL 371


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 417/742 (56%), Gaps = 30/742 (4%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D+N++  L   ++ +  + +   +F+ MN S+   W  ++ GY  N +    ++ ++RM+
Sbjct: 58  DLNITRDLCG-FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRME 116

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
            EGI+ ++FTF  V+    +   +    +VH  +IK G ++   VCN LI MYLK   + 
Sbjct: 117 CEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIE 176

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
            A  VFD M  RD ++WNSMV+GY  +   + +   F  M   G +  R   +S +  C+
Sbjct: 177 LAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACS 236

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
               LR   ++H QV+++ ++ D  ++T L+  Y KCGK++ A ++F+ +   K++V+W 
Sbjct: 237 IEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYS-KNIVAWN 295

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK 411
           AMI G  ++  +   V     +T   + P+      +L  +       +H   I+  +  
Sbjct: 296 AMIGGMQEDDKVIPDV-----ITMINLLPSCSQSGALLEGK------SIHGFAIRKMFLP 344

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              + TAL++ Y K G L  A  VF  ++EK++V+W+ M+A Y Q    + A+K+++ + 
Sbjct: 345 YLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHIL 404

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
           +E +KP+  T +SV+ A  A  A+  +GKQ H+  +K  L +   +S+A+V MY+K G++
Sbjct: 405 NEPLKPDAITIASVLPA-VAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDL 463

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           ++A E F     +D+VSWN+MI  YA HG  + +++ F EMR +  + +G TF+ ++TAC
Sbjct: 464 QTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTAC 523

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           + +GL+DEG  +F+ M  E+ I P +EHY CM+DL  R G L++A   I  MP   +A +
Sbjct: 524 SISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARI 583

Query: 652 WRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
           W ++LAA R              ++SL+  ++  YVLLSNMYA  G W++  R++ LM +
Sbjct: 584 WGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKE 643

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD-TSYVLQ 756
           + + K  G S +++  ++ SF+  D SH  +N IY  L+ L  ++ +  Y    T +   
Sbjct: 644 QGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPL 703

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D+  +   +    HS +LAI FGL++T  G P+ + KN R+C DCH   K IS++ +R+I
Sbjct: 704 DVAKKRGNSP-EYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRAAKKISQVTKREI 762

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           VV D   FHHF++G CSC DYW
Sbjct: 763 VVGDAKVFHHFRDGCCSCRDYW 784



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 250/508 (49%), Gaps = 26/508 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F++    +   +N ++  Y  + L QEA++ +  +   G+     T   V+K CG L  
Sbjct: 80  MFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLA 139

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G++VH + +K GF  DV V   L+D+Y++   +E   +VFD+M   ++VSW S++SG
Sbjct: 140 LMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSG 199

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  +      L  F  M   G K + F   + LG  + E  + + +++H  VI++  E+ 
Sbjct: 200 YQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELD 259

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  +LI MY K   V  A  VF+ +  ++ + WN+M+ G   ++  +           
Sbjct: 260 IMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDV-------- 311

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   T ++++  C+ +  L   + +H   ++        + T L+  Y KCG+++ 
Sbjct: 312 -------ITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKL 364

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F+ M E K++VSW  M++ ++QN     A+  F  +  E ++P+  T + +L   P
Sbjct: 365 AEHVFNQMNE-KNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVL---P 420

Query: 394 AVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           AV+         Q+H++I+K     +  +  A++  Y K G L  A + F+ +  KD+V+
Sbjct: 421 AVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVS 480

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ M+  YA  G    +++ + ++  +G KPN  TF S++ AC+      E    F++  
Sbjct: 481 WNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMK 540

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESA 534
           ++  ++  +     ++ +  + GN++ A
Sbjct: 541 VEYGIDPGIEHYGCMLDLLGRNGNLDEA 568



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 176/362 (48%), Gaps = 20/362 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R+ V +N ++  Y  D     +L  F  + RLG       + S L  C   
Sbjct: 179 EKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACS-- 236

Query: 92  FDHVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            +H    G ++HC+ ++S    D+ V TSL+D+Y +   V+   RVF+ +   N+V+W +
Sbjct: 237 IEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNA 296

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ G      +D+V+            P+  T   +L   +  G +     +H   I+  
Sbjct: 297 MIGGMQE---DDKVI------------PDVITMINLLPSCSQSGALLEGKSIHGFAIRKM 341

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 +  AL+ MY K   ++ A  VF+ M +++ ++WN+MVA YV NE + EA + F 
Sbjct: 342 FLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQ 401

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           ++     +    T  SV+   A        +Q+HS ++K G+  +  I   ++  Y+KCG
Sbjct: 402 HILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCG 461

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++ A + F  M   KDVVSW  MI  +  +G    ++ FF +M  +G +PNG T+  +L
Sbjct: 462 DLQTAREFFDGMV-CKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLL 520

Query: 390 TA 391
           TA
Sbjct: 521 TA 522



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 87/167 (52%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +F++  ++N V +N ++  Y ++  ++EAL +F  I    L     T++SVL   
Sbjct: 363 KLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAV 422

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G+Q+H   +K G   +  +S ++V +Y +  +++  R  FD M   +VVSW 
Sbjct: 423 AELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWN 482

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           +++  YA +      ++ F  M+ +G KPN  TF ++L   +  G++
Sbjct: 483 TMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLI 529


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/715 (35%), Positives = 379/715 (53%), Gaps = 97/715 (13%)

Query: 218 NALISMYLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
            +L+S Y  +  +RD+ A FD +    RD++  N+M++ +    L   A   F ++ LA 
Sbjct: 93  TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSL-LAS 151

Query: 276 AELTRS---TFVSVIKLCATTKELRLAR--QLHSQVLKNGIDFDHNIRTGLMVAYSKC-- 328
            +  R    +F S++       +L ++   QLH  V K G     ++   L+  Y KC  
Sbjct: 152 DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDA 211

Query: 329 -GKMEDASKIFSMMREMKDVVSWT-------------------------------AMISG 356
            G   DA K+   M E KD ++WT                               AMISG
Sbjct: 212 PGVTRDARKVLDEMPE-KDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISG 270

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK------ 406
           ++Q+G    A   F +M  + + P+ FT++ +L+A      F     VH   I+      
Sbjct: 271 YVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFV 330

Query: 407 ------------TNYEKSFSVGTA-----------------LLNAYVKKGILDEAAKVFE 437
                       T Y KS  +  A                 +L+ Y++ G LD AA++F+
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFK 390

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            +  K  ++W  M++GY   G  E A+K++ Q+ SE VKP ++T++  + AC     A++
Sbjct: 391 EMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAAC-GELGALK 449

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            GKQ HA  ++     +    +AL+TMY++ G ++ A  VF      D VSWN+MI    
Sbjct: 450 HGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG 509

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           QHGH ++ALE+F +M  Q +  D I+F+ ++TAC HAGLVD+G QYF+ M  +  I P  
Sbjct: 510 QHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGE 569

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LIS 663
           +HY+ ++DL  RAG + +A D+I  MPF  +  +W  +L+ CR              L  
Sbjct: 570 DHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFK 629

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           + P     Y+LLSN Y+A G W + ARVRKLM DR VKKE G SWIEV NK + FL GD 
Sbjct: 630 MVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDT 689

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
            HP ++++Y  LE +  +++  GY PDT + LQD+    KE +L  HSERLA++FGL+  
Sbjct: 690 KHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKL 749

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           PAGA + ++KNL++CGDCHT +  +S+   R+IVVRD  RFHHFK+G CSCG+YW
Sbjct: 750 PAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 225/521 (43%), Gaps = 96/521 (18%)

Query: 29  KKDQSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSV 84
           +   + FD  P  +R+ V +N ++  + R SL   A+++F  +      L     + +S+
Sbjct: 106 RDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSL 165

Query: 85  LKTCGCLFDHVFGR--QVHCECVKSGFARDVNVSTSLVDLYMRTNN---VEDGRRVFDDM 139
           L   G + D       Q+HC   K G    ++VS +L+ LYM+ +      D R+V D+M
Sbjct: 166 LSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEM 225

Query: 140 NESNVVSWTS-------------------------------LLSGYARNKMNDRVLELFH 168
            E + ++WT+                               ++SGY ++ M     ELF 
Sbjct: 226 PEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFR 285

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT----SVCNALISMY 224
           RM  + I P+ FTF+++L   A+ G       VH   I+   + V      V NAL+++Y
Sbjct: 286 RMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLY 345

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNS-------------------------------MVA 253
            KS  +  A  +FD M  +D ++WN+                               MV+
Sbjct: 346 SKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVS 405

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           GYV   L  +A + FN M     +    T+   +  C     L+  +QLH+ +++ G + 
Sbjct: 406 GYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEA 465

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
            ++    L+  Y++CG ++DA  +F +M  + D VSW AMIS   Q+G    A+  F QM
Sbjct: 466 SNSAGNALLTMYARCGAVKDARLVFLVMPNV-DSVSWNAMISALGQHGHGREALELFDQM 524

Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY------EKSFSVGTA------LLN 421
             +G+ P+  ++  ILTA         HA ++   +      E+ F +         L++
Sbjct: 525 VAQGIYPDRISFLTILTACN-------HAGLVDDGFQYFESMERDFGISPGEDHYARLID 577

Query: 422 AYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
              + G + EA  + + +  E     W A+L+G    GD E
Sbjct: 578 LLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDME 618



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 161/359 (44%), Gaps = 36/359 (10%)

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
           V +N ++  Y +  +  EA  LF  +    +P    T +S+L  C      + G+ VH +
Sbjct: 262 VVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQ 321

Query: 104 CVK--SGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY----- 154
            ++    F  +  + V+ +LV LY ++  +    ++FD M   +VVSW ++LSGY     
Sbjct: 322 FIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGC 381

Query: 155 --------------------------ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
                                         + +  L+LF++M+ E +KP  +T++  +  
Sbjct: 382 LDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAA 441

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
             + G +    Q+H  +++ G E   S  NAL++MY +   V+DAR VF  M + DS++W
Sbjct: 442 CGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSW 501

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
           N+M++    +    EA E F+ M   G    R +F++++  C     +    Q    + +
Sbjct: 502 NAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMER 561

Query: 309 N-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           + GI    +    L+    + G++ +A  +   M        W A++SG   NG ++L 
Sbjct: 562 DFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELG 620


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/606 (38%), Positives = 355/606 (58%), Gaps = 49/606 (8%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           S F  +++ C +   L L +QLHS ++ +G   D  I   L+  YSKCG+++ A  +F +
Sbjct: 53  SLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGV 112

Query: 341 M------------------------REM------KDVVSWTAMISGHLQNGAIDLAVNFF 370
           M                        R+M      ++V +W AM++G +Q    +  +  F
Sbjct: 113 MPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLF 172

Query: 371 CQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M   G  P+ F    +L      +  V+  QVH ++ K  +E +  V ++L + Y+K 
Sbjct: 173 SRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKC 232

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G L E  ++   +  +++VAW+ ++AG AQ G  E  +  Y  +   G +P++ TF SVI
Sbjct: 233 GSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVI 292

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           ++C+   A + QG+Q HA  IKA  +  + V S+L++MYS+ G +E + +VF      D+
Sbjct: 293 SSCSE-LATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDV 351

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           V W+SMI  Y  HG   +A+++F +M ++ LE + +TF+ ++ AC+H GL ++G ++FD+
Sbjct: 352 VCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDL 411

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----- 661
           MV ++ + P +EHY+CMVDL  R G +E+A  +I  MP  A    W+T+L+AC++     
Sbjct: 412 MVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTE 471

Query: 662 ---------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                      L P D   YVLLSN++A+   W + + VRK M DRK+KKE G SW+EVK
Sbjct: 472 MARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVK 531

Query: 713 NKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSE 772
           N+ + F  GD SHP+S +I S L EL++ +K  GY PD   VL D+D E KE  L  HSE
Sbjct: 532 NQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSE 591

Query: 773 RLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLC 832
           +LAIAF L+ TP G P++++KNLRVC DCH  IK IS++  R+I+VRD++RFHHFK G C
Sbjct: 592 KLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRC 651

Query: 833 SCGDYW 838
           SCGDYW
Sbjct: 652 SCGDYW 657



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 167/327 (51%), Gaps = 3/327 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P+RN   +N ++    +   ++E L LF  +  LG       L SVL+ C  L
Sbjct: 138 RKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGL 197

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              V GRQVH    K GF  ++ V +SL  +YM+  ++ +G R+   M   NVV+W +L+
Sbjct: 198 RALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLI 257

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G A+N   + VL+ ++ M++ G +P+  TF +V+   ++   +    Q+H  VIK G  
Sbjct: 258 AGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGAS 317

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           ++ SV ++LISMY +   +  +  VF   E+ D + W+SM+A Y  +   +EA + FN M
Sbjct: 318 LIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQM 377

Query: 272 GLAGAELTRSTFVSVIKLCATT--KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
                E    TF+S++  C+    KE +  +     V K G+       T ++    + G
Sbjct: 378 EQEKLEANDVTFLSLLYACSHCGLKE-KGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYG 436

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISG 356
            +E+A  +   M    DV++W  ++S 
Sbjct: 437 SVEEAEALIRSMPVKADVITWKTLLSA 463



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 197/416 (47%), Gaps = 27/416 (6%)

Query: 77  FGSTLSSVLKTCGCLFD-----HVFGRQVHCECVKSGFA-------RDVNVSTSLVDLYM 124
            G  L S++ T GC  D     H+      C  + +          +++     L++ Y 
Sbjct: 70  LGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYF 129

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           R+ +    R++FD+M E NV +W ++++G  + + N+  L LF RM   G  P+ F   +
Sbjct: 130 RSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGS 189

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           VL   A    +    QVH  V K G E    V ++L  MY+K   + +   +   M  ++
Sbjct: 190 VLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQN 249

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            + WN+++AG   N    E  + +N M +AG    + TFVSVI  C+    L   +Q+H+
Sbjct: 250 VVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHA 309

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           +V+K G     ++ + L+  YS+CG +E + K+F +  E  DVV W++MI+ +  +G   
Sbjct: 310 EVIKAGASLIVSVISSLISMYSRCGCLEYSLKVF-LECENGDVVCWSSMIAAYGFHGRGV 368

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQ--VHAHIIKTNYEKSFSV 415
            A++ F QM +E +  N  T+  +L A       +  +  F   V  + +K   E  ++ 
Sbjct: 369 EAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEH-YTC 427

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
              LL  Y   G ++EA  +   +  K D++ W  +L+       TE A +I  ++
Sbjct: 428 MVDLLGRY---GSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEV 480


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/736 (33%), Positives = 413/736 (56%), Gaps = 47/736 (6%)

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           R+ D+M   N VS+  ++  Y+R  +    L  F R +      + FT++  L   +   
Sbjct: 57  RLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRAL 116

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
            V T   VH MV+  G      + N++ SMY +   + +AR VFD  E+RD ++WN++++
Sbjct: 117 DVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLS 176

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL---------RLARQLHS 304
           GYV      E  E F+ M   G         S+IK CA++            R+A  +H 
Sbjct: 177 GYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHG 236

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            V+K G+D D  + + ++  Y+K G + +A  +F  + +  +V+   AMI+G  +  A D
Sbjct: 237 CVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPD-PNVIVLNAMIAGFCREEAAD 295

Query: 365 LA---VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGT 417
           +A   +  + ++   G++P+ F++S IL A      F    Q+H  ++K +++    +G+
Sbjct: 296 VAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGS 355

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           AL++ Y   G +++  + F  + ++D+V W+++++G  Q    E A++++++    G++P
Sbjct: 356 ALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRP 415

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           + F  SSV+NAC A  A    G+Q    ++K+  N    + ++ + M ++ G++++A+  
Sbjct: 416 DVFAMSSVMNAC-ASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRR 474

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL-EFDGITFIGVITACTHAGL 596
           F+    RD+VSW+++I  +A HG  + AL VF EM    +   + ITF+ ++TAC+H GL
Sbjct: 475 FQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGL 534

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           VDEG +Y+ IM +E+ + PT++H +C+VDL  RAG L  A   I    F   A VWR++L
Sbjct: 535 VDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLL 594

Query: 657 AACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
           A+CR+              + L+P  SA YV+L NMY   G     ++ R LM +R VKK
Sbjct: 595 ASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERGVKK 654

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
           E G SWIE+ +  +SF+AGD SHP+S  IY K+ E+ +++  AG                
Sbjct: 655 EPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKV--AGIS------------SR 700

Query: 763 KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
           ++ +   HSE+LA+AFG++  P  AP++++KNLRVC DCH+ ++LISK ERR+I++RD  
Sbjct: 701 EQDLAGCHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMELISKSERREIILRDAI 760

Query: 823 RFHHFKEGLCSCGDYW 838
           RFH F++G CSCG YW
Sbjct: 761 RFHRFRDGSCSCGGYW 776



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 160/579 (27%), Positives = 279/579 (48%), Gaps = 36/579 (6%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS 83
           +P ++ +   L D  P+RN V YN ++  Y R  L   +L  F   R     +   T ++
Sbjct: 51  APLHAAR---LLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAA 107

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
            L  C    D   G+ VH   V  G    + +S S+  +Y R   + + RRVFD   E +
Sbjct: 108 ALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERD 167

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL---------ADEGI 194
            VSW +LLSGY R    +  LE+F  M   G+  NSF   +++             D G 
Sbjct: 168 DVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGG 227

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
              A  VH  V+K G +    + +A+I MY K   + +A A+F  + D + I  N+M+AG
Sbjct: 228 GRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAG 287

Query: 255 YVTNE---LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +   E   +  EA   ++ +   G + +  +F S+++ C    E    +Q+H QVLK+  
Sbjct: 288 FCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSF 347

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
             D  I + L+  YS  G MED  + F  + + +DVV WT++ISG +QN   + A+  F 
Sbjct: 348 QGDVYIGSALIDLYSGSGCMEDGYRCFRSLPK-QDVVIWTSVISGCVQNELFEEALRLFQ 406

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           +  R G+RP+ F  S ++ A  +++      Q+    +K+ + +  ++G + ++   + G
Sbjct: 407 ESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSG 466

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV-KPNEFTFSSVI 486
            +D A + F+ ++ +D+V+WSA+++ +A  G    A+ ++ ++    V  PNE TF S++
Sbjct: 467 DVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSIL 526

Query: 487 NACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
            AC+     V++G +++        +   + +  CV    V +  + G +  A E F R 
Sbjct: 527 TACS-HGGLVDEGLRYYGIMNDEYGLSPTIKHCTCV----VDLLGRAGRLADA-EAFIRD 580

Query: 542 RK--RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
                D V W S++     HG  ++   V  ++   DLE
Sbjct: 581 SAFHDDAVVWRSLLASCRIHGDMERGQLVADKI--MDLE 617



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 131/265 (49%), Gaps = 13/265 (4%)

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILD--EAAKVFELIDEKDIVAW 447
            A P V+   VHAH+ + +   S  +   LL +Y + G+     AA++ + +  ++ V++
Sbjct: 13  AALPHVAA--VHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSY 70

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + ++  Y++ G    ++  + +  +     + FT+++ + AC+  +  V  GK  HA  +
Sbjct: 71  NLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACS-RALDVRTGKAVHAMVV 129

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
              L N L +S+++ +MY++ G +  A  VF    +RD VSWN+++ GY + G  ++ LE
Sbjct: 130 LGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLE 189

Query: 568 VFKEMRRQDLEFDGITFIGVITAC------THAGLVDEGQ--QYFDIMVNEHHIYPTMEH 619
           VF  M R  L ++      +I  C        AG V  G+  +     V +  +   +  
Sbjct: 190 VFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFL 249

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMP 644
            S M+D+Y++ G L  A+ +   +P
Sbjct: 250 ASAMIDMYAKRGALTNAVALFKSVP 274


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/688 (35%), Positives = 390/688 (56%), Gaps = 20/688 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K C  L +   G+ +    ++ GF  D+ V++SL+ LY     +ED RR FD M
Sbjct: 12  TFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKM 71

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + + V W  +++GY +   +D  ++LF  M     KP+S TF+ VL +   E +V    
Sbjct: 72  IDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGR 131

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H +V+++G + V  V N L+++Y K + + DAR +FD M   D + WN M+ GYV N 
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNG 191

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A   FN M  AG +    TF S +   A +  L+  +++H  ++++G+  D  + +
Sbjct: 192 FMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNS 251

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC     A K+F++  +  D+V +TAMISG++ NG    A+  F  + ++ + 
Sbjct: 252 ALIDLYFKCRDAVMACKMFNLSTKF-DIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMI 310

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN  T+S IL A   ++      ++H +IIK   E+   VG+A++N Y K G LD A  +
Sbjct: 311 PNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLI 370

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  I  KD + W++++  ++Q G  E A+ ++RQ+  EGVK +  T S+ ++AC A   A
Sbjct: 371 FGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSAC-ANIPA 429

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H   IK    + L   SAL+ MY+K G +  A  VF   ++++ V+WNS+I  
Sbjct: 430 LHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAA 489

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HG+   +L +F  M  + ++ D ITF+ ++++C HAG V++G +YF  M  E+ I  
Sbjct: 490 YGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPA 549

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            MEHY+CM DL+ RAG L++A ++I  MPF  +A+VW T+L ACR              L
Sbjct: 550 QMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYL 609

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + L+P +S  Y+LL+++ A  G W+   +++ LM +R V+K  G SWIEV N T  F A 
Sbjct: 610 LDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAA 669

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKP 749
           D SHP+S QIYS L+ L   L+  GY P
Sbjct: 670 DGSHPESPQIYSLLKSLLLELRKVGYVP 697



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 261/489 (53%), Gaps = 8/489 (1%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G+ P+ +TF  V+        V     +  M+++ G ++   V ++LI +Y  +  + DA
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R  FD M D+D + WN M+ GYV       A + F +M  + A+    TF  V+ +  + 
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             +   RQLH  V+++G+DF   +   L+  YSK  ++ DA K+F MM ++ D+V W  M
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQI-DLVVWNRM 183

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           I G++QNG +D A   F +M   G++P+  T++  L +    S      ++H +I++   
Sbjct: 184 IGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGV 243

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
                + +AL++ Y K      A K+F L  + DIV ++AM++GY   G  + A++I+R 
Sbjct: 244 ILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRW 303

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           L  + + PN  TFSS++ AC A  AA++ G++ H   IK +L     V SA++ MY+K G
Sbjct: 304 LLQKKMIPNALTFSSILPAC-AGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCG 362

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
            ++ A  +F R   +D + WNS+I  ++Q G  ++A+ +F++M  + +++D +T    ++
Sbjct: 363 RLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALS 422

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC +   +  G++    M+ +      +   S ++++Y++ G L  A  + N M    + 
Sbjct: 423 ACANIPALHYGKEIHGFMI-KGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQ-EKNE 480

Query: 650 TVWRTVLAA 658
             W +++AA
Sbjct: 481 VAWNSIIAA 489



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 191/370 (51%), Gaps = 6/370 (1%)

Query: 27  YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           YSK  Q      LFD  PQ + V +NR++  Y ++    +A  LF  +   G+     T 
Sbjct: 156 YSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITF 215

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +S L +          +++H   V+ G   DV ++++L+DLY +  +     ++F+   +
Sbjct: 216 TSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTK 275

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            ++V +T+++SGY  N MN   LE+F  +  + + PN+ TFS++L   A    +    ++
Sbjct: 276 FDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGREL 335

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  +IKN  E    V +A+++MY K   +  A  +F  +  +D+I WNS++  +  +   
Sbjct: 336 HGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKP 395

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            EA   F  MG+ G +    T  + +  CA    L   +++H  ++K   + D    + L
Sbjct: 396 EEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSAL 455

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y+KCGK+  A  +F++M+E K+ V+W ++I+ +  +G +  ++  F  M  EG++P+
Sbjct: 456 INMYAKCGKLNIARLVFNLMQE-KNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPD 514

Query: 382 GFTYSIILTA 391
             T+  IL++
Sbjct: 515 HITFLTILSS 524



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 85/167 (50%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F R   ++ + +N ++  + +D   +EA+ LF  +   G+     T+S+ L  C  +  
Sbjct: 370 IFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPA 429

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             +G+++H   +K  F  D+   ++L+++Y +   +   R VF+ M E N V+W S+++ 
Sbjct: 430 LHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAA 489

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           Y  +      L LFH M  EGI+P+  TF T+L      G V   V+
Sbjct: 490 YGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVR 536


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/643 (35%), Positives = 371/643 (57%), Gaps = 23/643 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+LI++Y+K   +R AR +FD M  R  +++N ++ GY+ +  H+E  + F NM  +  +
Sbjct: 59  NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                F +V+  CA +  +    Q H  + K G+ F H +++ L+  YSKC  ++ A ++
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQV 178

Query: 338 FSM----MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
                  +    D   + ++++  +++G +  AV    +M  EGV  +  TY  ++    
Sbjct: 179 LESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCG 238

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +       QVHA ++K        VG+ L++ + K G +  A KVF+ +  +++V W++
Sbjct: 239 QIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTS 298

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++  Y Q G+ E  + +   +  EG   NEFTF+ ++NA  A  AA+  G   HA   K 
Sbjct: 299 LMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNA-FAGMAALRHGDLLHARVEKL 357

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            + N + V +AL+ MYSK G I+S+ +VF   R RD+++WN+MICGY+QHG  K+AL +F
Sbjct: 358 GIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLF 417

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           ++M       + +TF+GV++AC H  LV+EG  Y + ++    + P +EHY+C+V +  R
Sbjct: 418 QDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCR 477

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLL 675
           AGMLE+A + +           WR +L AC +              + + P D   Y LL
Sbjct: 478 AGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLL 537

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SNMYA    W     +RK+M +R VKKE G SWIE++N  + F +   +HP+  QIY+K+
Sbjct: 538 SNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKV 597

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           + L   +K  GY P+   VL D++DE KE+ L+ HSE+LAIA+GL+  P+ AP++++KNL
Sbjct: 598 QLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNL 657

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+C DCHT +KLISK+  R I+VRD +RFHHF++G C+C D+W
Sbjct: 658 RICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 249/478 (52%), Gaps = 23/478 (4%)

Query: 96  FGRQVHCECVKSGFA------RDVNVS--TSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           FG+ +H + +    +      R+ N+    SL++LY++ + +   R +FD+M+  +VVS+
Sbjct: 30  FGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSY 89

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
             L+ GY  +  +  V++LF  M     +PN + F+TVL   A  G V   +Q H  + K
Sbjct: 90  NVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFK 149

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-----DRDSITWNSMVAGYVTNELHM 262
            G      V ++L+ MY K   V  A  V +        D D+  +NS++   V +    
Sbjct: 150 FGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLG 209

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EA E    M   G      T+VSV+ LC   ++L L  Q+H+Q+LK G+ FD  + + L+
Sbjct: 210 EAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLV 269

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             + KCG +  A K+F  ++  ++VV WT++++ +LQNG  +  +N    M REG   N 
Sbjct: 270 DMFGKCGDVLSARKVFDGLQN-RNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNE 328

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           FT++++L A   ++  +    +HA + K   +    VG AL+N Y K G +D +  VF  
Sbjct: 329 FTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFD 388

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  +DI+ W+AM+ GY+Q G  + A+ +++ + S G  PN  TF  V++AC A  A V +
Sbjct: 389 MRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSAC-AHLALVNE 447

Query: 499 GKQFHACSIKA-KLNNALCVSSALVTMYSKKGNIESASEVFKR--QRKRDLVSWNSMI 553
           G  +    +K  K+   L   + +V +  + G +E A E F R  Q K D+V+W  ++
Sbjct: 448 GFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEA-ENFMRTTQVKWDVVAWRVLL 504



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 203/459 (44%), Gaps = 26/459 (5%)

Query: 7   LKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF 66
           L SLIN   K     LR   Y      LFD    R+ V YN L+  Y     H E + LF
Sbjct: 58  LNSLINLYVK--CSKLRLARY------LFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLF 109

Query: 67  LGIRRLGLPLFGSTLSSVLKTC---GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY 123
             +            ++VL  C   G +F+   G Q H    K G      V +SLV +Y
Sbjct: 110 KNMVSSLYQPNEYVFTTVLSACAHSGRVFE---GMQCHGFLFKFGLVFHHFVKSSLVHMY 166

Query: 124 MRTNNVEDGRRVFDDM-----NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
            +  +V+   +V +       N+++   + S+L+    +      +E+  RM  EG+  +
Sbjct: 167 SKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWD 226

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           S T+ +V+G+      +   +QVH  ++K G      V + L+ M+ K   V  AR VFD
Sbjct: 227 SVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFD 286

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
           G+++R+ + W S++  Y+ N    E     + M   G      TF  ++   A    LR 
Sbjct: 287 GLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRH 346

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
              LH++V K GI     +   L+  YSKCG ++ +  +F  MR  +D+++W AMI G+ 
Sbjct: 347 GDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRN-RDIITWNAMICGYS 405

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHAHIIKT-NYEKSF 413
           Q+G    A+  F  M   G  PN  T+  +L+A   ++     F     ++K    E   
Sbjct: 406 QHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGL 465

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAML 451
              T ++    + G+L+EA         K D+VAW  +L
Sbjct: 466 EHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLL 504



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 136/278 (48%), Gaps = 1/278 (0%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T  SV+  CG + D   G QVH + +K G   DV V + LVD++ +  +V   R+VFD +
Sbjct: 229 TYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGL 288

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              NVV WTSL++ Y +N   +  L L   M  EG   N FTF+ +L   A    +    
Sbjct: 289 QNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGD 348

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +H  V K G +    V NALI+MY K   +  +  VF  M +RD ITWN+M+ GY  + 
Sbjct: 349 LLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHG 408

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIR 318
           L  +A   F +M  AG      TFV V+  CA    +       +Q++K+  ++      
Sbjct: 409 LGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHY 468

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           T ++    + G +E+A       +   DVV+W  +++ 
Sbjct: 469 TCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNA 506



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 169/370 (45%), Gaps = 20/370 (5%)

Query: 291 ATTKELRLARQLHSQVL-KNGIDFDHNIR-------TGLMVAYSKCGKMEDASKIFSMMR 342
           A TK L   + +H+Q+L +N     H+ R         L+  Y KC K+  A  +F  M 
Sbjct: 23  ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEM- 81

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP----AVSPF 398
            ++ VVS+  ++ G+L +G     V  F  M     +PN + ++ +L+A           
Sbjct: 82  SLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGM 141

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-----LIDEKDIVAWSAMLAG 453
           Q H  + K        V ++L++ Y K   +D A +V E     + ++ D   ++++L  
Sbjct: 142 QCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNA 201

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
             + G    AV++  ++  EGV  +  T+ SV+  C      +  G Q HA  +K  L  
Sbjct: 202 LVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLC-GQIRDLGLGLQVHAQLLKGGLTF 260

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V S LV M+ K G++ SA +VF   + R++V W S++  Y Q+G  ++ L +   M 
Sbjct: 261 DVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMD 320

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           R+    +  TF  ++ A      +  G       V +  I   +   + ++++YS+ G +
Sbjct: 321 REGTMSNEFTFAVLLNAFAGMAALRHG-DLLHARVEKLGIKNRVIVGNALINMYSKCGCI 379

Query: 634 EKAMDIINRM 643
           + + D+   M
Sbjct: 380 DSSYDVFFDM 389


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/660 (36%), Positives = 370/660 (56%), Gaps = 20/660 (3%)

Query: 108 GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELF 167
           GF  D  V +SL+ LY     +ED RR+FD M   + V W  +L+G+ +    +  +++F
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 168 HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
             M+    KPNS TF++VL + A E +     Q+H +VI  G      V NAL++MY K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
             + DA  +F+ M D + +TWN M+AG+V N    EA   F+ M  AG      TF S +
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
                +  L+  +++H  +L++GI  D  +++ L+  Y KC  +  A KIF     + D+
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNV-DI 240

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           V  TA+ISG++ NG  + A+  F  +  E + PN  T + +L A   ++      ++HA+
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I+K   ++   VG+A+++ Y K G LD A ++F  + EKD V W+A++   +Q G  + A
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           + ++RQ+  EG+  +  + S+ ++AC A   A+  GK  H+  IK   ++ +   SAL+ 
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSAC-ANLPALHHGKAIHSFMIKGAFDSEVFAESALID 419

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY K GN+  A  VF   R+++ VSWNS+I  Y  HGH + +L +F +M    ++ D +T
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           F+ +++AC HAG VD+G QYF  M  E+ I   MEHY+C+VDL+ RAG L +A + I  M
Sbjct: 480 FLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNM 539

Query: 644 PFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERA 689
           PF+    VW T+L ACR              L+ L P +S  YVLLSN++A  G W    
Sbjct: 540 PFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVR 599

Query: 690 RVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
           ++R LM  R V+K  GYSWIEV   T+ F+A D SHP+S QIYS L  L   L+  GY P
Sbjct: 600 KIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCP 659



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 279/542 (51%), Gaps = 16/542 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+ P ++ V +N +L  + +      A+ +F  +R         T +SVL  C     
Sbjct: 29  LFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEAL 88

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG Q+H   +  GF  D  V+ +LV +Y +   + D  ++F+ M ++NVV+W  +++G
Sbjct: 89  SEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAG 148

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +N   D    LF  M   G+ P+S TF++ L  + +   +    ++H  ++++G  + 
Sbjct: 149 FVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALD 208

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + +ALI +Y K + V  A  +F    + D +   ++++GYV N L+ +A E F  +  
Sbjct: 209 VFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLE 268

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   T  SV+  CA    L L ++LH+ +LK+G+D   ++ + +M  Y+KCG+++ 
Sbjct: 269 EKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDL 328

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A +IF  M E KD V W A+I+   QNG    A++ F QM REG+  +  + S  L+A  
Sbjct: 329 AYQIFRRMPE-KDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACA 387

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +        +H+ +IK  ++      +AL++ Y K G L  A  VF+++ EK+ V+W++
Sbjct: 388 NLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNS 447

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC---- 505
           ++A Y   G  E ++ ++ ++  +G++P+  TF ++++AC   +  V++G Q+  C    
Sbjct: 448 IIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSAC-GHAGQVDKGIQYFRCMTEE 506

Query: 506 -SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
             I A++ +  C+    V ++ + G +  A E  K      D   W +++     HG+ +
Sbjct: 507 YGIPARMEHYACI----VDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVE 562

Query: 564 KA 565
            A
Sbjct: 563 LA 564



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 187/370 (50%), Gaps = 6/370 (1%)

Query: 27  YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           YSK  Q      LF+  P  N V +N ++  + ++    EA  LF  +   G+     T 
Sbjct: 118 YSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITF 177

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +S L +         G+++H   ++ G A DV + ++L+D+Y +  +V    ++F     
Sbjct: 178 ASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTN 237

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            ++V  T+++SGY  N +N+  LE+F  +  E + PN+ T ++VL   A    +    ++
Sbjct: 238 VDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKEL 297

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  ++K+G +    V +A++ MY K   +  A  +F  M ++D++ WN+++     N   
Sbjct: 298 HANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKP 357

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            EA + F  MG  G      +  + +  CA    L   + +HS ++K   D +    + L
Sbjct: 358 QEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESAL 417

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y KCG +  A  +F MMRE K+ VSW ++I+ +  +G +++++  F +M  +G++P+
Sbjct: 418 IDMYGKCGNLSVARCVFDMMRE-KNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPD 476

Query: 382 GFTYSIILTA 391
             T+  IL+A
Sbjct: 477 HVTFLTILSA 486


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 251/801 (31%), Positives = 427/801 (53%), Gaps = 65/801 (8%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
             R +H   +K G   D ++  +++  Y++   V D   VF  M+  +VVS+++L+S ++
Sbjct: 122 LARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFS 179

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           +       ++LF RM++ GI+PN ++F  +L        +   +QVH + IK G   +  
Sbjct: 180 KLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVF 239

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF----NNM 271
           V NALI +Y K   +  A  +FD M  RD  +WN+M++  V    + +A E F     N 
Sbjct: 240 VANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNK 299

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
           G    + T ST ++    CA        R++H+  ++ G++ + ++   ++  Y++CG +
Sbjct: 300 GFKADQFTLSTLLTA---CARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSL 356

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV------------------------ 367
              + +F  M  ++D+++WT MI+ +++ G +DLAV                        
Sbjct: 357 NHVAALFERM-PVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKN 415

Query: 368 -------NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVG 416
                  N F +M +EG     FT + ++ A   +       Q+H  IIK  +  +  + 
Sbjct: 416 NEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIE 475

Query: 417 TALLNAYVKKGILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
            AL++   K G +D+A ++F+ +  D  + +  ++M+ GYA+ G  E A+ ++ +  SEG
Sbjct: 476 AALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEG 535

Query: 475 VKP-NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
               +E  F+S++  C       E GKQ H  ++K   +  L V +++++MYSK  NI+ 
Sbjct: 536 TMVLDEVAFTSILGVC-GTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDD 594

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA--C 591
           A + F      D+VSWN +I G   H    +AL ++  M +  ++ D ITF+ +++A   
Sbjct: 595 AIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKF 654

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           T + L+DE +  F  M   H + PT EHY+ +V +    G+LE+A ++IN+MPF    +V
Sbjct: 655 TSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSV 714

Query: 652 WRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
           WR +L  CRL              I ++P D + YVL+SN+YAA+G W     VR+ M D
Sbjct: 715 WRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRD 774

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
           R ++K    SW+ +K + ++F A D SHPQSN IYS L+ L  +   AGY+PD S+VLQ+
Sbjct: 775 RGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDILILKCLKAGYEPDMSFVLQE 834

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           ++++ K+  L  HS +LA  +GL+ T  G P+++VKN+ +C DCHT +K  + + +R+I+
Sbjct: 835 VEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVVTQREII 894

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
            RD + FH F  G CSC  YW
Sbjct: 895 FRDASGFHCFSNGQCSCKGYW 915



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/572 (25%), Positives = 263/572 (45%), Gaps = 41/572 (7%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V Y+ L+  + + +   EA+ LF  +R  G+     +  ++L  C    +   G QVH
Sbjct: 167 DVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVH 226

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
              +K G+++ V V+ +L+ LY +   ++    +FD+M + ++ SW +++S   +    +
Sbjct: 227 ALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYE 286

Query: 162 RVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           + LELF  + Q +G K + FT ST+L   A         ++H   I+ G E   SV NA+
Sbjct: 287 KALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAI 346

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITW-------------------------------N 249
           I  Y +   +    A+F+ M  RD ITW                               N
Sbjct: 347 IGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYN 406

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           +++ G+  N   ++A   F  M   GAELT  T   VI  C    +L ++RQ+H  ++K 
Sbjct: 407 ALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKF 466

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
           G   +  I   L+   SKCG+M+DA ++F S+  +  + +  T+MI G+ +NG  + A+ 
Sbjct: 467 GFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAIC 526

Query: 369 FFCQMTREGVRP-NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
            F +   EG    +   ++ IL     +       Q+H   +KT +     VG ++++ Y
Sbjct: 527 LFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMY 586

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K   +D+A K F  +   D+V+W+ ++AG       + A+ I+  +   G+KP+  TF 
Sbjct: 587 SKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKAGIKPDAITFV 646

Query: 484 SVINACTAPSAAV--EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
            +++A    S+ +  E    F +  +   L       ++LV +    G +E A E+  + 
Sbjct: 647 LIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKM 706

Query: 542 RKRDLVS-WNSMICGYAQHGHTKKALEVFKEM 572
                VS W +++ G   H +T     V K +
Sbjct: 707 PFDPEVSVWRALLDGCRLHANTSIGKRVAKHI 738



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 166/297 (55%), Gaps = 9/297 (3%)

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           ++++L     ++ LAR LH+ +LK G   D ++   ++ AY K G + DA ++F M    
Sbjct: 109 NLLRLSVKYTDIDLARALHASILKLGE--DTHLGNAVIAAYIKLGLVVDAYEVF-MGMST 165

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQV 400
            DVVS++A+IS   +      A+  F +M   G+ PN +++  ILTA           QV
Sbjct: 166 PDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQV 225

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           HA  IK  Y +   V  AL+  Y K G LD A  +F+ + ++DI +W+ M++   +    
Sbjct: 226 HALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSY 285

Query: 461 EGAVKIYRQLT-SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
           E A++++R L  ++G K ++FT S+++ AC    A + QG++ HA +I+  L N L VS+
Sbjct: 286 EKALELFRVLNQNKGFKADQFTLSTLLTACARCHARI-QGREIHAYAIRIGLENNLSVSN 344

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           A++  Y++ G++   + +F+R   RD+++W  MI  Y + G    A+++F +M  ++
Sbjct: 345 AIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKN 401



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 218/489 (44%), Gaps = 46/489 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLF 92
           LFD  PQR+   +N ++    +   +++AL LF  + +  G      TLS++L  C    
Sbjct: 260 LFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCH 319

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN------------------------ 128
             + GR++H   ++ G   +++VS +++  Y R  +                        
Sbjct: 320 ARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMIT 379

Query: 129 -------VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                  V+    +F+ M E N VS+ +LL+G+ +N    + L LF RM  EG +   FT
Sbjct: 380 AYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFT 439

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM- 240
            + V+        +  + Q+H  +IK G      +  ALI M  K   + DA  +F  + 
Sbjct: 440 LTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLS 499

Query: 241 -EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE-LTRSTFVSVIKLCATTKELRL 298
            +  +SI   SM+ GY  N L  EA   F      G   L    F S++ +C T     +
Sbjct: 500 TDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEV 559

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +Q+H Q LK G   +  +   ++  YSKC  ++DA K F+ M    DVVSW  +I+G L
Sbjct: 560 GKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTM-PGHDVVSWNGLIAGQL 618

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVH-------AHIIKTNYEK 411
            +   D A+  +  M + G++P+  T+ +I++A    S   +        +  +  + E 
Sbjct: 619 LHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEP 678

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           +     +L+      G+L+EA ++   +  + ++  W A+L G     +T    ++ + +
Sbjct: 679 TSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHI 738

Query: 471 TSEGVKPNE 479
              G++P +
Sbjct: 739 I--GMEPRD 745


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/625 (38%), Positives = 361/625 (57%), Gaps = 35/625 (5%)

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D  +WNS++A    +    EA   F++M       TRS+F   IK C++  ++   +Q H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
            Q    G   D  + + L+V YS CGK+EDA K+F  + + +++VSWT+MI G+  NG  
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMIRGYDLNGNA 158

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------------VHAHIIKTNYE 410
             AV+ F  +    +  N    ++ L +   VS                +H+ +IK  ++
Sbjct: 159 LDAVSLFKDLL---IEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD 215

Query: 411 KSFSVGTALLNAYVK--KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +  SVG  LL+AY K  +G +  A K+F+ I +KD V+++++++ YAQ G +  A  ++R
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFR 275

Query: 469 QLTSEGVKP-NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           +L  E V   N  T S+V+ A  + S A+  GK  H   I+  L + + V ++++ MY K
Sbjct: 276 RLIKEKVVTFNCITLSTVLLA-VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +E+A   F R + +++ SW +MI GY  HGH  KALE+F  M    +  + ITF+ V
Sbjct: 335 CGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+HAGL D G  +F+ M     + P +EHY CMVDL  RAG L+KA D+I +M    
Sbjct: 395 LAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEP 454

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
            + +W ++LAACR              L  L P +   Y+LLS++YA +G W++  RVR 
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRM 514

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
            M +R + K  G+S +E+  + + FL GD  HPQ  +IY  L EL+ +L +AGY  +TS 
Sbjct: 515 TMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
           V  D+D+E KE  L  HSE+LAIAFG++ T  G+ + +VKNLRVC DCH VIKLISK+  
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVD 634

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+ VVRD  RFHHFK+G CSCGDYW
Sbjct: 635 REFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 220/442 (49%), Gaps = 27/442 (6%)

Query: 33  SLFDRSPQRNFV-EYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +LF+R   +  V  +N ++ +  R     EAL  F  +R+L L    S+    +K C  L
Sbjct: 30  TLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSL 89

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G+Q H +    G+  D+ VS++L+ +Y     +ED R+VFD++ + N+VSWTS++
Sbjct: 90  LDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV---------LADEGIVATAVQVH 202
            GY  N      + LF  + +E    ++  F   +G+         +A +G+  +   +H
Sbjct: 150 RGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTES---IH 206

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           + VIK G +   SV N L+  Y K     V  AR +FD + D+D +++NS+++ Y  + +
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 261 HMEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
             EAF+ F  + +    +T +  T  +V+   + +  LR+ + +H QV++ G++ D  + 
Sbjct: 267 SNEAFDVFRRL-IKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T ++  Y KCG++E A   F  M+  K+V SWTAMI+G+  +G    A+  F  M   GV
Sbjct: 326 TSIIDMYCKCGRVETARLAFDRMKN-KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGV 384

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA---KV 435
           RPN  T+  +L A        V  H      +  F V   L +      +L  A    K 
Sbjct: 385 RPNYITFVSVLAACSHAGLHDVGWHWFNA-MKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443

Query: 436 FELID----EKDIVAWSAMLAG 453
           ++LI     E D + WS++LA 
Sbjct: 444 YDLIQKMKMEPDSIIWSSLLAA 465



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 133/269 (49%), Gaps = 9/269 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI------RRLGLPLFGSTLSSVL 85
           + +FD  P+RN V +  ++  Y  +    +A++LF  +          + L    + SV+
Sbjct: 131 RKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVI 190

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR--TNNVEDGRRVFDDMNESN 143
             C  +        +H   +K GF R V+V  +L+D Y +     V   R++FD + + +
Sbjct: 191 SACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP-NSFTFSTVLGVLADEGIVATAVQVH 202
            VS+ S++S YA++ M++   ++F R+  E +   N  T STVL  ++  G +     +H
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIH 310

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             VI+ G E    V  ++I MY K   V  AR  FD M++++  +W +M+AGY  +    
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAA 370

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +A E F  M  +G      TFVSV+  C+
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACS 399



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 3/226 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           + +FD+   ++ V YN ++  Y +  +  EA ++F  + +  +  F   TLS+VL     
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSH 299

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                 G+ +H + ++ G   DV V TS++D+Y +   VE  R  FD M   NV SWT++
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAM 359

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNG 209
           ++GY  +    + LELF  M   G++PN  TF +VL   +  G+        + M  + G
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFG 419

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
            E        ++ +  ++  ++ A  +   M+ + DSI W+S++A 
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAA 465


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/723 (33%), Positives = 400/723 (55%), Gaps = 31/723 (4%)

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVE----GIKPNSFTFSTVLGVLADEGIVATA 198
           N VSW S++  ++ N  ++    L   M  E       P+  T  TVL V A E  +   
Sbjct: 2   NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             VH   +K   +    + NAL+ MY K   + +A+ +F    +++ ++WN+MV G+   
Sbjct: 62  KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121

Query: 259 ELHMEAFETFNNMGLAGAELTRS---TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                 F+    M LAG E  ++   T ++ + +C     L   ++LH   LK    ++ 
Sbjct: 122 GDTHGTFDVLRQM-LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            +    + +Y+KCG +  A ++F  +R  K V SW A+I GH Q+    L+++   QM  
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRS-KTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 239

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
            G+ P+ FT   +L+A   +       +VH  II+   E+   V  ++L+ Y+  G L  
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
              +F+ +++K +V+W+ ++ GY Q G  + A+ ++RQ+   G++    +   V  AC+ 
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 359

Query: 492 -PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
            PS  +  G++ HA ++K  L +   ++ +L+ MY+K G+I  +S+VF   +++   SWN
Sbjct: 360 LPS--LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 417

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           +MI GY  HG  K+A+++F+EM+R     D +TF+GV+TAC H+GL+ EG +Y D M + 
Sbjct: 418 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 477

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDII-NRMPFAASATVWRTVLAACR--------- 660
             + P ++HY+C++D+  RAG L+KA+ ++   M   A   +W+++L++CR         
Sbjct: 478 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 537

Query: 661 -----LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                L  L+P     YVLLSN+YA  G W++  +VR+ MN+  ++K+AG SWIE+  K 
Sbjct: 538 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKV 597

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLA 775
           +SF+ G+       +I S    L  ++   GY+PDT  V  D+ +E K   L  HSE+LA
Sbjct: 598 FSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLA 657

Query: 776 IAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           + +GL+ T  G  +++ KNLR+C DCH   KLISK+  R+IVVRD  RFHHFK G+CSCG
Sbjct: 658 LTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCG 717

Query: 836 DYW 838
           DYW
Sbjct: 718 DYW 720



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 254/531 (47%), Gaps = 25/531 (4%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLG--IRRLGLPLFG---STLSSVLKTCGCLFDHV 95
           RNFV +N ++  +  +   +E+  L LG  +   G   F    +TL +VL  C    +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESF-LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 59

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G+ VH   VK    +++ ++ +L+D+Y +   + + + +F   N  NVVSW +++ G++
Sbjct: 60  LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 119

Query: 156 RNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
                    ++  +M   G  +K +  T    + V   E  + +  ++H   +K      
Sbjct: 120 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 179

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V NA ++ Y K   +  A+ VF G+  +   +WN+++ G+  +     + +    M +
Sbjct: 180 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 239

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +G      T  S++  C+  K LRL +++H  +++N ++ D  +   ++  Y  CG++  
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
              +F  M E K +VSW  +I+G+LQNG  D A+  F QM   G++  G +   +  A  
Sbjct: 300 VQALFDAM-EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358

Query: 394 AVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +   ++    HA+ +K   E    +  +L++ Y K G + +++KVF  + EK   +W+A
Sbjct: 359 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 418

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HA 504
           M+ GY   G  + A+K++ ++   G  P++ TF  V+ AC   S  + +G ++      +
Sbjct: 419 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN-HSGLIHEGLRYLDQMKSS 477

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ--RKRDLVSWNSMI 553
             +K  L +  CV    + M  + G ++ A  V   +   + D+  W S++
Sbjct: 478 FGLKPNLKHYACV----IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 524



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 202/419 (48%), Gaps = 23/419 (5%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +++HC  +K  F  +  V+ + V  Y +  ++   +RVF  +    V SW +L+ G+A++
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 224

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 L+   +M++ G+ P+SFT  ++L   +    +    +VH  +I+N  E    V 
Sbjct: 225 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVY 284

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            +++S+Y+    +   +A+FD MED+  ++WN+++ GY+ N     A   F  M L G +
Sbjct: 285 LSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 344

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L   + + V   C+    LRL R+ H+  LK+ ++ D  I   L+  Y+K G +  +SK+
Sbjct: 345 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 404

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ ++E K   SW AMI G+  +G    A+  F +M R G  P+  T+  +LTA      
Sbjct: 405 FNGLKE-KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN---- 459

Query: 398 FQVHAHIIKTNY------EKSFSVGTAL------LNAYVKKGILDEAAKVF--ELIDEKD 443
              H+ +I          + SF +   L      ++   + G LD+A +V   E+ +E D
Sbjct: 460 ---HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 516

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +  W ++L+      + E   K+  +L   E  KP  +   S + A       V + +Q
Sbjct: 517 VGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 575



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 158/327 (48%), Gaps = 4/327 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +F     +    +N L+  + + +  + +L+  L ++  GL     T+ S+L  C  L
Sbjct: 200 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 259

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G++VH   +++   RD+ V  S++ LY+    +   + +FD M + ++VSW +++
Sbjct: 260 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 319

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +N   DR L +F +M + GI+    +   V G  +    +    + H   +K+  E
Sbjct: 320 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 379

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +  +LI MY K+  +  +  VF+G++++ + +WN+M+ GY  + L  EA + F  M
Sbjct: 380 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 439

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKCG 329
              G      TF+ V+  C  +  +    +   Q +K+      N++    ++    + G
Sbjct: 440 QRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ-MKSSFGLKPNLKHYACVIDMLGRAG 498

Query: 330 KMEDASKIFS-MMREMKDVVSWTAMIS 355
           +++ A ++ +  M E  DV  W +++S
Sbjct: 499 QLDKALRVVAEEMSEEADVGIWKSLLS 525


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/795 (34%), Positives = 418/795 (52%), Gaps = 95/795 (11%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDD---MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
           T+L+  Y+ +N++ +   + +     + S+V  W  L+         +  L LF RM+  
Sbjct: 61  TNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTL 120

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
              P+ +TF  V     +         +H  VI+ G E    VCNA+ISMY K K V  A
Sbjct: 121 HWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHA 180

Query: 234 RAVFDGMEDR---DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST-FVSVIKL 289
           R VFD +  R   DS+TWNS+V+ Y    +   A   F  M +    L  +   V+++ +
Sbjct: 181 RKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPV 240

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C         RQ+H   +++G+  D  +   L+  Y+KCGKMEDA+K+F  MR  KDVV+
Sbjct: 241 CGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMR-FKDVVT 299

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGV------------------------------- 378
           W AM++G+ QNG  + A++ F +M  E +                               
Sbjct: 300 WNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMC 359

Query: 379 ----RPNGFTYSIILTAQPAVSPF----QVHAHIIK-------TNYEKSFSVGTALLNAY 423
               RPN  T   +L+A  +V       + H + +K        +     +V  AL++ Y
Sbjct: 360 GCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMY 419

Query: 424 VKKGILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL--TSEGVKPNE 479
            K   L+ A  +F+ I   ++D+V W+ M+ GYAQ GD   A++++ ++      + PN+
Sbjct: 420 AKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPND 479

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKL--NNALCVSSALVTMYSKKGNIESASEV 537
           FT S V+ AC A  AA++ GKQ HA  ++     ++ L V++ L+ MYSK G++++A  V
Sbjct: 480 FTISCVLMAC-ARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVV 538

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           F    KR+ VSW S++ GY  HG ++ A  VF EMR++ L  DGITF+ V+ AC+H+G+ 
Sbjct: 539 FDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM- 597

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           D G            + P +EHY+CMVDL  RAG L +AM +IN MP   +  VW  +L+
Sbjct: 598 DFG------------VDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLS 645

Query: 658 ACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
           ACR              L+ L+  +   Y LLSN+YA    W++ AR+  LM    +KK 
Sbjct: 646 ACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKI 705

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHK 763
            G+SW++ +    +F  GD +H QS +IY  L +L  R+K        ++ L D+DDE K
Sbjct: 706 PGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIK-------ANFSLHDVDDEEK 758

Query: 764 EAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNR 823
              LS+HSE+LA+A+ ++  P GAP++I KNLR+CGD H+ I  IS +   +I++RD++R
Sbjct: 759 GDQLSEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSR 818

Query: 824 FHHFKEGLCSCGDYW 838
           FH FK G CSC  YW
Sbjct: 819 FHQFKNGSCSCKGYW 833



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 139/523 (26%), Positives = 243/523 (46%), Gaps = 65/523 (12%)

Query: 46  YNRLLFEYCRDSLH----QEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           +N+L+    R +LH      AL LF  ++ L       T   V K CG + +   G  +H
Sbjct: 94  WNQLI----RHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIH 149

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV---VSWTSLLSGYARNK 158
              ++ GF  +V V  +++ +Y +   V   R+VFD++    +   V+W S++S Y+   
Sbjct: 150 GCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCF 209

Query: 159 MNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
           + +  + LF  M V  GI P++     +L V    G+     QVH   +++G      V 
Sbjct: 210 VPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVG 269

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM------ 271
           NAL+ MY K   + DA  VF+ M  +D +TWN+MV GY  N    +A   F  M      
Sbjct: 270 NALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIE 329

Query: 272 ------------------GLAGAELTRS-----------TFVSVIKLCATTKELRLARQL 302
                             G    ++ R            T +S++  CA+   L   ++ 
Sbjct: 330 SDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET 389

Query: 303 HSQVLKNGIDFDHN-------IRTGLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMI 354
           H   +K  +  +HN       +   L+  Y+KC  +E A  +F  +  + +DVV+WT MI
Sbjct: 390 HCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMI 449

Query: 355 SGHLQNGAIDLAVNFFCQMTR--EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
            G+ Q+G  + A+  F +M +    + PN FT S +L A   ++      Q+HA++++ +
Sbjct: 450 GGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRS 509

Query: 409 YEKS--FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
              S    V   L++ Y K G +D A  VF+ + +++ V+W+++L GY   G +E A ++
Sbjct: 510 RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRV 569

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSA--AVEQGKQFHACSI 507
           + ++  E +  +  TF  V+ AC+       V+ G + +AC +
Sbjct: 570 FDEMRKEALVLDGITFLVVLYACSHSGMDFGVDPGVEHYACMV 612



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 194/413 (46%), Gaps = 55/413 (13%)

Query: 32  QSLFDRSPQRNF---VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS--SVLK 86
           + +FD    R     V +N ++  Y    +   A++LF  +  +G  +   T+   ++L 
Sbjct: 181 RKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMT-VGYGILPDTVGVVNILP 239

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN------ 140
            CG L   + GRQVH  CV+SG   DV V  +LVD+Y +   +ED  +VF+ M       
Sbjct: 240 VCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVT 299

Query: 141 -----------------------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
                                        ES+VV+W+S++SGYA+       +++F +M 
Sbjct: 300 WNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMC 359

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK-------NGGEVVTSVCNALISMY 224
               +PN  T  ++L   A  G +    + H   +K       N      +V NALI MY
Sbjct: 360 GCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMY 419

Query: 225 LKSKMVRDARAVFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
            K K +  ARA+FD +  +DRD +TW  M+ GY  +     A + F+ M      +  + 
Sbjct: 420 AKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPND 479

Query: 283 FV--SVIKLCATTKELRLARQLHSQVLKNG-IDFD-HNIRTGLMVAYSKCGKMEDASKIF 338
           F    V+  CA    L+  +Q+H+ VL+   ID D   +   L+  YSK G ++ A  +F
Sbjct: 480 FTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVF 539

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             M + ++ VSWT++++G+  +G  + A   F +M +E +  +G T+ ++L A
Sbjct: 540 DSMSK-RNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYA 591



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 164/326 (50%), Gaps = 14/326 (4%)

Query: 294 KELRLARQLHSQVLKNG--IDFDHNIRTGLMVAYSKCGKMEDASKIF--SMMREMKDVVS 349
           K L  A+ LH Q + NG  ++   N+ T L+  Y     + +A  +   ++      V  
Sbjct: 35  KTLTQAKLLHQQYIINGHLLNSYTNV-TNLIYTYISSNSITNAILLLEKNVTPSHSSVYW 93

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHII 405
           W  +I   L   + + A+  F +M      P+ +T+  +  A   +S F+    +H  +I
Sbjct: 94  WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK---DIVAWSAMLAGYAQIGDTEG 462
           +  +E +  V  A+++ Y K   +  A KVF+ +  +   D V W+++++ Y+       
Sbjct: 154 RLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNV 213

Query: 463 AVKIYRQLT-SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
           AV ++R++T   G+ P+     +++  C      +  G+Q H   +++ L   + V +AL
Sbjct: 214 AVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGL-CGRQVHGFCVRSGLVEDVFVGNAL 272

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           V MY+K G +E A++VF+R R +D+V+WN+M+ GY+Q+G  + AL +F +MR + +E D 
Sbjct: 273 VDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDV 332

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIM 607
           +T+  VI+     G   E    F  M
Sbjct: 333 VTWSSVISGYAQRGFGCEAMDVFRQM 358



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 25/290 (8%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVK-------SGFARDVNVSTSLVDLYMRTNNVEDG 132
           TL S+L  C  +   + G++ HC  VK       +    D+ V  +L+D+Y +  ++E  
Sbjct: 369 TLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVA 428

Query: 133 RRVFDDM--NESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEG-IKPNSFTFSTVLGV 188
           R +FD++   + +VV+WT ++ GYA++   +  L+LF  M +++  I PN FT S VL  
Sbjct: 429 RAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMA 488

Query: 189 LADEGIVATAVQVHTMVIKNG--GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI 246
            A    +    Q+H  V++       V  V N LI MY KS  V  A+ VFD M  R+++
Sbjct: 489 CARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAV 548

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           +W S++ GY  +    +AF  F+ M      L   TF+ V+  C+           HS  
Sbjct: 549 SWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACS-----------HSG- 596

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           +  G+D        ++    + G++ +A ++ + M      V W A++S 
Sbjct: 597 MDFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSA 646



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 6/169 (3%)

Query: 32  QSLFDR-SPQ-RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLKT 87
           +++FD   P+ R+ V +  ++  Y +      AL LF  + ++   +  +  T+S VL  
Sbjct: 429 RAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMA 488

Query: 88  CGCLFDHVFGRQVHCECVK-SGFARDV-NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
           C  L    FG+Q+H   ++ S    DV  V+  L+D+Y ++ +V+  + VFD M++ N V
Sbjct: 489 CARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAV 548

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           SWTSLL+GY  +  ++    +F  M+ E +  +  TF  VL   +  G+
Sbjct: 549 SWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM 597


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/686 (35%), Positives = 376/686 (54%), Gaps = 20/686 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K+C  L     GR VH      G   D+ V ++L+ +Y     + D R+VFD M
Sbjct: 148 TFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGM 207

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E + V W  ++ GY +       +ELF  M+  G +PN  T +  L V A E  +   V
Sbjct: 208 AERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGV 267

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+HT+ +K G E   +V N L+SMY K K + D   +F  M   D +TWN M++G V N 
Sbjct: 268 QLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNG 327

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A   F +M  +G      T VS++            ++LH  +++N +  D  + +
Sbjct: 328 FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC  +  A  ++   + + DVV  + MISG++ NG    AV  F  +  +G+R
Sbjct: 388 ALVDIYFKCRAVRMAQSVYDSSKAI-DVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIR 446

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN    + +L A  +++      ++H++ +K  YE    V +AL++ Y K G LD +  +
Sbjct: 447 PNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYI 506

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  I  KD V W++M++ +AQ G+ E A+ ++R++  EGVK +  T SSV++AC A   A
Sbjct: 507 FSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSAC-ASLPA 565

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H   IK  +   L   SAL+ MY K GN+E A  VF+   +++ VSWNS+I  
Sbjct: 566 IYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIAS 625

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  +G  K+++ + + M+ +  + D +TF+ +++AC HAG V EG + F  M  E+ I P
Sbjct: 626 YGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAP 685

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            MEH++CMVDLYSRAG L+KAM++I  MPF   A +W  +L ACR              L
Sbjct: 686 RMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQEL 745

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L PH+S  YVL+SN+ A  G W   ++VR+LM D KV+K  GYSW++V N ++ F+A 
Sbjct: 746 FKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAA 805

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGY 747
           D SHP S  IY  L+ +   L++ G+
Sbjct: 806 DKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 187/642 (29%), Positives = 316/642 (49%), Gaps = 29/642 (4%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           L +VL+ C        G QVH   V +G  A D  + T LV +Y+      D   VF  +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 140 NE---SNVVSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGI 194
                +  + W  L+ G          L  + +M        P+S TF  V+   A  G 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +A    VH      G +    V +ALI MY    ++ DAR VFDGM +RD + WN M+ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           YV       A E F +M  +G E   +T    + + AT  +L    QLH+  +K G++ +
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             +   L+  Y+KC  ++D  K+F +M    D+V+W  MISG +QNG +D A+  FC M 
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPR-DDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           + G+RP+  T   +L A   ++ F    ++H +I++        + +AL++ Y K   + 
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            A  V++     D+V  S M++GY   G ++ AVK++R L  +G++PN    +SV+ AC 
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC- 459

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A  AA++ G++ H+ ++K        V SAL+ MY+K G ++ +  +F +   +D V+WN
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWN 519

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           SMI  +AQ+G  ++AL +F+EM  + +++  +T   V++AC     +  G++   +++ +
Sbjct: 520 SMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVI-K 578

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC-------RLIS 663
             I   +   S ++D+Y + G LE A  +   MP   +   W +++A+          +S
Sbjct: 579 GPIRADLFAESALIDMYGKCGNLEWAHRVFESMP-EKNEVSWNSIIASYGAYGLVKESVS 637

Query: 664 LQPH--------DSAIYVLLSNMYAATGHWQERARVRKLMND 697
           L  H        D   ++ L +  A  G  QE  R+ + M +
Sbjct: 638 LLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTE 679



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 287/555 (51%), Gaps = 16/555 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ V +N ++  Y +      A+ LF  +R  G     +TL+  L      
Sbjct: 201 RQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATE 260

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  FG Q+H   VK G   +V V+ +LV +Y +   ++DG ++F  M   ++V+W  ++
Sbjct: 261 SDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMI 320

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG  +N   D+ L LF  MQ  GI+P+S T  ++L  L D        ++H  +++N   
Sbjct: 321 SGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVH 380

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   + +AL+ +Y K + VR A++V+D  +  D +  ++M++GYV N +  EA + F  +
Sbjct: 381 MDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYL 440

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G         SV+  CA+   ++L ++LHS  LKN  +    + + LM  Y+KCG++
Sbjct: 441 LEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRL 500

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + +  IFS +   KD V+W +MIS   QNG  + A+N F +M  EGV+ +  T S +L+A
Sbjct: 501 DLSHYIFSKI-SAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSA 559

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             ++       ++H  +IK          +AL++ Y K G L+ A +VFE + EK+ V+W
Sbjct: 560 CASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSW 619

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-- 505
           ++++A Y   G  + +V + R +  EG K +  TF ++++AC A +  V++G +   C  
Sbjct: 620 NSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSAC-AHAGQVQEGLRLFRCMT 678

Query: 506 ---SIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGH 561
               I  ++ +  C    +V +YS+ G ++ A E +     K D   W +++     H +
Sbjct: 679 EEYQIAPRMEHFAC----MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRN 734

Query: 562 TKKALEVFKEMRRQD 576
            + A    +E+ + D
Sbjct: 735 VELAEIASQELFKLD 749


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 239/736 (32%), Positives = 420/736 (57%), Gaps = 23/736 (3%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            ++L  R    + V +N ++  Y +  L  E   L+  +++ GL    ST +S+L     +
Sbjct: 278  RTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANM 337

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 GRQ+H   VK G   +V V +SL++LY++   + D ++VFD   E N+V W ++L
Sbjct: 338  TAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAIL 397

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             G+ +N++ +  +++F  M+   ++ + FTF +VLG   +   +    QVH + IKNG +
Sbjct: 398  YGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMD 457

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                V NA++ MY K   +  A+A+F  +  +DS++WN+++ G   NE   EA      M
Sbjct: 458  ADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRM 517

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
               G  L   +F + I  C+    +   +Q+HS  +K  +  +H + + L+  YSK G +
Sbjct: 518  KFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDV 577

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            E + K+ + + +   +V   A+I+G +QN   D A+  F Q+ ++G +P+ FT++ IL+ 
Sbjct: 578  ESSRKVLAHV-DASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSG 636

Query: 392  --QPAVSPF--QVHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFELI-DEKDIV 445
              +P  S    QVH + +K+    +  S+G +L+  Y+K  +L++A K+ E + D K++V
Sbjct: 637  CTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLV 696

Query: 446  AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
             W+A ++GYAQ G +  ++ ++ ++ S  V+ +E TF+SV+ AC+   AA+  GK+ H  
Sbjct: 697  EWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACS-EMAALTDGKEIHGL 755

Query: 506  SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQHGHTKK 564
             +K+   +    +SAL+ MYSK G++ S+ E+FK  + R +++ WNSMI G+A++G+  +
Sbjct: 756  IVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANE 815

Query: 565  ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
            AL +F++M+   ++ D +T +GV+ AC+HAGL+ EG  +FD M   + I P ++HY+C++
Sbjct: 816  ALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLI 875

Query: 625  DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSA 670
            DL  R G L+KA ++I+++PF A   +W T LAAC              +L+ ++P  S+
Sbjct: 876  DLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSS 935

Query: 671  IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
             YV LS+++AA G+W E    R+ M ++ V K  G SWI V NK   F+  D  HP +  
Sbjct: 936  TYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALS 995

Query: 731  IYSKLEELSTRLKDAG 746
            IY  L++L+  +   G
Sbjct: 996  IYKMLDDLTGMMNKDG 1011



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 297/558 (53%), Gaps = 11/558 (1%)

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K G   D     +++        + D R +   +  ++ V+W ++++ Y+++ ++  V  
Sbjct: 251 KMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFG 310

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L+  M+ +G+ P   TF+++L   A+        Q+H   +K+G +    V ++LI++Y+
Sbjct: 311 LYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYV 370

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   + DA+ VFD   +++ + WN+++ G+V NEL  E  + F  M  A  E    TFVS
Sbjct: 371 KHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVS 430

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+  C     L L RQ+H   +KNG+D D  +   ++  YSK G ++ A  +FS++  +K
Sbjct: 431 VLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLI-PVK 489

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVH 401
           D VSW A+I G   N     A+N   +M   G+  +  +++  + A   +       Q+H
Sbjct: 490 DSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIH 549

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           +  IK N   + +VG++L++ Y K G ++ + KV   +D   IV  +A++ G  Q    +
Sbjct: 550 SASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNRED 609

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSA 520
            A+++++Q+  +G KP+ FTF+S+++ CT P ++V  GKQ H  ++K A LN    +  +
Sbjct: 610 EAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSV-IGKQVHCYTLKSAILNQDTSLGIS 668

Query: 521 LVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           LV +Y K   +E A+++ +     ++LV W + I GYAQ+G++ ++L +F  MR  D+  
Sbjct: 669 LVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRS 728

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI-YPTMEHYSCMVDLYSRAGMLEKAMD 638
           D  TF  V+ AC+    + +G++   ++V    + Y T    S ++D+YS+ G +  + +
Sbjct: 729 DEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETAT--SALMDMYSKCGDVISSFE 786

Query: 639 IINRMPFAASATVWRTVL 656
           I   +    +   W +++
Sbjct: 787 IFKELKNRQNIMPWNSMI 804



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 277/582 (47%), Gaps = 41/582 (7%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           ++ VL  C  L     GRQVHC+ +KSGF   V     LVD+Y +   V+D RR+FD + 
Sbjct: 160 IAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIA 219

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + + WTS+++GY R     + L LF RM+  G  P+  T  T++  LA  G +     
Sbjct: 220 CPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLG---- 275

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
                                          DAR +   +    ++ WN+++A Y  + L
Sbjct: 276 -------------------------------DARTLLKRIRMTSTVAWNAVIASYSQSGL 304

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             E F  + +M   G   TRSTF S++   A        RQ+H+  +K+G+D +  + + 
Sbjct: 305 DSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSS 364

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y K G + DA K+F    E K++V W A++ G +QN   +  +  F  M R  +  
Sbjct: 365 LINLYVKHGCISDAKKVFDFSTE-KNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEA 423

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + FT+  +L A   +       QVH   IK   +    V  A+L+ Y K G +D A  +F
Sbjct: 424 DDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALF 483

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            LI  KD V+W+A++ G A   +   A+ + +++   G+  +E +F++ INAC+    A+
Sbjct: 484 SLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACS-NIWAI 542

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E GKQ H+ SIK  + +   V S+L+ +YSK G++ES+ +V        +V  N++I G 
Sbjct: 543 ETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGL 602

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
            Q+    +A+E+F+++ +   +    TF  +++ CT       G+Q     +    +   
Sbjct: 603 VQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQD 662

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                 +V +Y +  +LE A  ++  +P   +   W   ++ 
Sbjct: 663 TSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISG 704



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 4/205 (1%)

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQI 457
           +HA I++        +G AL++ Y + G +  A +             A S++L+ +A+ 
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134

Query: 458 GDTEGAVKIYRQL-TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
           G     +  ++++  S G  P++F  + V++AC+    A+E G+Q H   +K+   +++ 
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRL-GALEHGRQVHCDVLKSGFCSSVF 193

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
             + LV MY+K G ++ A  +F      D + W SMI GY + G  ++AL +F  M +  
Sbjct: 194 CQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMG 253

Query: 577 LEFDGITFIGVITACTHAGLVDEGQ 601
              D +T + +I+     G + + +
Sbjct: 254 SVPDQVTCVTIISTLASMGRLGDAR 278


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/567 (40%), Positives = 357/567 (62%), Gaps = 22/567 (3%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIFSMM 341
           +  ++K C    ++   R +H+ ++ +    +H +   ++V  Y+KCG ++DA ++F  M
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSP- 397
              KD+V+WTA+I+G  QN     A+  F QM R G +PN FT S +L A   +  + P 
Sbjct: 150 -PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPG 208

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            Q+HA  +K  Y+ S  VG+AL++ Y + G +D A   F+ +  K  V+W+A+++G+A+ 
Sbjct: 209 TQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK 268

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G+ E A+ +  ++  +  +P  FT+SSV++AC A   A+EQGK  HA  IK+ L     +
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVLSAC-ASIGALEQGKWVHAHMIKSGLKLIAFI 327

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            + L+ MY+K G+I+ A  VF R  K D+VSWN+M+ G AQHG  K+ L+ F++M R  +
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI 387

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           E + I+F+ V+TAC+H+GL+DEG  YF++M  ++ + P + HY   VDL  R G+L++A 
Sbjct: 388 EPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAE 446

Query: 638 DIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATG 683
             I  MP   +A VW  +L ACR+                L PHDS   +LLSN+YA+ G
Sbjct: 447 RFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAG 506

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W++ A+VRK+M +  VKK+   SW+E++N  + F+A D +HP+  +I  K EE+S ++K
Sbjct: 507 RWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIK 566

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
           + GY PDTS+VL  +D + +E  L  HSE+LA+AF L+ TP G+P++I KN+RVCGDCH 
Sbjct: 567 EIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHA 626

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEG 830
            IK +SK+  R+I+VRDTNRFH F++G
Sbjct: 627 AIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 196/413 (47%), Gaps = 40/413 (9%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           S +LK C  L     GR VH   V S F  + + +   +V++Y +   ++D RR+FD+M 
Sbjct: 91  SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP 150

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             ++V+WT+L++G+++N      L LF +M   G +PN FT S++L     E  +    Q
Sbjct: 151 TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQ 210

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H   +K G +    V +AL+ MY +   +  A+  FDGM  +  ++WN++++G+     
Sbjct: 211 LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGE 270

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
              A      M     + T  T+ SV+  CA+   L   + +H+ ++K+G+     I   
Sbjct: 271 GEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNT 330

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+K G ++DA ++F  + +  DVVSW  M++G  Q+G     ++ F QM R G+ P
Sbjct: 331 LLDMYAKAGSIDDAKRVFDRLVK-PDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           N  ++  +LT                               A    G+LDE    FEL+ 
Sbjct: 390 NEISFLCVLT-------------------------------ACSHSGLLDEGLYYFELMK 418

Query: 441 ----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
               E D+  +   +    ++G  + A +  R++    ++P    + +++ AC
Sbjct: 419 KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP---IEPTAAVWGALLGAC 468



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 191/417 (45%), Gaps = 44/417 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P ++ V +  L+  + +++  ++AL LF  + RLG      TLSS+LK  G    
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H  C+K G+   V V ++LVD+Y R  +++  +  FD M   + VSW +L+SG
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +AR    +  L L  +MQ +  +P  FT+S+VL   A  G +     VH  +IK+G +++
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + N L+ MY K+  + DA+ VFD +   D ++WN+M+ G   + L  E  + F  M  
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E    +F+ V+  C+           HS +L  G+ +                    
Sbjct: 385 IGIEPNEISFLCVLTACS-----------HSGLLDEGLYY-------------------- 413

Query: 334 ASKIFSMMREMK---DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
               F +M++ K   DV  +   +    + G +D A  F  +M    + P    +  +L 
Sbjct: 414 ----FELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP---IEPTAAVWGALLG 466

Query: 391 AQPAVSPFQVHAHIIKTNYE-KSFSVGTALL--NAYVKKGILDEAAKVFELIDEKDI 444
           A       ++  +  +  +E      G  +L  N Y   G   + AKV +++ E  +
Sbjct: 467 ACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGV 523



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 87/164 (53%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q  FD  P ++ V +N L+  + R    + AL+L   ++R        T SSVL  C  +
Sbjct: 244 QLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASI 303

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH   +KSG      +  +L+D+Y +  +++D +RVFD + + +VVSW ++L
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           +G A++ +    L+ F +M   GI+PN  +F  VL   +  G++
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLL 407


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/612 (37%), Positives = 354/612 (57%), Gaps = 61/612 (9%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           S +++++K C   + L+  +Q+H+ +  +G      I   L+  Y+KCG + DA K+F  
Sbjct: 120 SIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDE 178

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QP 393
           M   +D+ SW  MISG+++ G  + A N F +M       + F+++ I++        + 
Sbjct: 179 MVH-RDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRPEE 233

Query: 394 AVSPF---------------------------------QVHAHIIKTNYEKSFSVGTALL 420
           A+  +                                 ++H HI++   +    V  +LL
Sbjct: 234 ALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLL 293

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + Y K G ++EA  +F+ ++E+D+V+W+ M+  Y + G  E    ++R L +  + PN+F
Sbjct: 294 DMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDF 353

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           TF+ V+NAC A  AA + GKQ HA  ++   ++    +SALV MYSK G+IE+A  VF+ 
Sbjct: 354 TFAGVLNAC-ADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEI 412

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
             + DL SW S++ GYAQHG   KAL  F+ + +   + DGI FIGV++AC HAGLVD+G
Sbjct: 413 LPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKG 472

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            +YF  +  +H +  T++HY+C++DL +RAG   +A  IIN MP      +W  +L  CR
Sbjct: 473 LEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCR 532

Query: 661 --------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                         L  ++P + A YV L+N+YA+ G   E A +R+ M+ R + K+ G 
Sbjct: 533 IHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGM 592

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SWIE++ + + F  GD SHP+S +I   L ELS R+K+ GY PDT++VL D++ E KE  
Sbjct: 593 SWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEEN 652

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           LS HSE+LA+AFG+++TP+G P+++ KNLR C DCH  IK IS +  R I+VRD+NRFH 
Sbjct: 653 LSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHC 712

Query: 827 FKEGLCSCGDYW 838
           F+ G CSC DYW
Sbjct: 713 FEGGSCSCKDYW 724



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 229/488 (46%), Gaps = 49/488 (10%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +L G +R +     ++L +R++    KP +  + T+L     +  +    QVH   IK  
Sbjct: 97  ILCGQSRLR---EAVQLLYRIE----KPYASIYLTLLKFCLKQRALKEGKQVHAH-IKTS 148

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
           G +   + N L+ MY K   + DA  VFD M  RD  +WN M++GYV      +A   F+
Sbjct: 149 GSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFD 208

Query: 270 NMG----------LAGA----------ELTR------------STFVSVIKLCATTKELR 297
            M           ++G           EL R             T  S +   A    L 
Sbjct: 209 KMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLH 268

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           + +++H  +++ G+D D  +   L+  Y KCG +E+A  IF  M E +DVVSWT MI  +
Sbjct: 269 MGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEE-RDVVSWTTMIHTY 327

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKSF 413
           L+NG  +     F  +    + PN FT++ +L A   ++      Q+HA++++  ++   
Sbjct: 328 LKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFS 387

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           S  +AL++ Y K G ++ A  VFE++ + D+ +W+++L GYAQ G  + A+  +  L   
Sbjct: 388 SAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKS 447

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           G KP+   F  V++AC A +  V++G + FH+   K  L   +   + ++ + ++ G   
Sbjct: 448 GTKPDGIAFIGVLSAC-AHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFT 506

Query: 533 SASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
            A  +      K D   W +++ G   HG+ + A    K +   + E +  T++ +    
Sbjct: 507 EAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPE-NPATYVTLANIY 565

Query: 592 THAGLVDE 599
             AG+  E
Sbjct: 566 ASAGMRAE 573



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 232/501 (46%), Gaps = 56/501 (11%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPL---------FGSTLSSVLKTCGCLFDHVFG 97
           NRL    C   L +EA+++  G  RL   +         + S   ++LK C        G
Sbjct: 83  NRL----CDSKLFKEAIDILCGQSRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEG 138

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY--- 154
           +QVH     SG +  + +S  L+D+Y +  ++ D  +VFD+M   ++ SW  ++SGY   
Sbjct: 139 KQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKG 197

Query: 155 -----ARN---KMNDR--------------------VLELFHRMQVEGI-KPNSFTFSTV 185
                ARN   KM +R                     LEL+  MQ     K N  T S+ 
Sbjct: 198 GNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSA 257

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L   A    +    ++H  +++ G +    V  +L+ MY K   + +AR +FD ME+RD 
Sbjct: 258 LAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDV 317

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           ++W +M+  Y+ N    E F  F ++  +       TF  V+  CA      L +Q+H+ 
Sbjct: 318 VSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAY 377

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           +++ G D   +  + L+  YSKCG +E+A  +F ++ +  D+ SWT+++ G+ Q+G  D 
Sbjct: 378 MVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQ-PDLFSWTSLLVGYAQHGQHDK 436

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG--TALL 420
           A++FF  + + G +P+G  +  +L+A      V     + H IK  +  + ++     ++
Sbjct: 437 ALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACII 496

Query: 421 NAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP-N 478
           +   + G   EA  +  E+  + D   W+A+L G    G+ E A +  + L    ++P N
Sbjct: 497 DLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFE--IEPEN 554

Query: 479 EFTFSSVINACTAPSAAVEQG 499
             T+ ++ N   +     E+ 
Sbjct: 555 PATYVTLANIYASAGMRAEEA 575



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 193/435 (44%), Gaps = 56/435 (12%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKT 87
           +K ++LFD+ P R+   +  ++    + +  +EAL L+  +++         T+SS L  
Sbjct: 201 EKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAA 260

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              +     G+++H   ++ G   D  V  SL+D+Y +  ++E+ R +FD M E +VVSW
Sbjct: 261 SAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSW 320

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T+++  Y +N   +    LF  +    I PN FTF+ VL   AD        Q+H  +++
Sbjct: 321 TTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVR 380

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G +  +S  +AL+ MY K   + +A++VF+ +   D  +W S++ GY  +  H +A   
Sbjct: 381 VGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHF 440

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG------- 320
           F  +  +G +     F+ V+  CA           H+ ++  G+++ H+I+         
Sbjct: 441 FELLLKSGTKPDGIAFIGVLSACA-----------HAGLVDKGLEYFHSIKEKHGLTRTI 489

Query: 321 -----LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
                ++   ++ G+  +A  I + M    D   W A++ G   +G ++LA         
Sbjct: 490 DHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELA--------- 540

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
                           + A S F++          ++ +    L N Y   G+  E A +
Sbjct: 541 ---------------KRAAKSLFEIEP--------ENPATYVTLANIYASAGMRAEEANI 577

Query: 436 FELIDEKDIVAWSAM 450
            E +D + IV    M
Sbjct: 578 RETMDSRGIVKKPGM 592



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 106/245 (43%), Gaps = 25/245 (10%)

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           QL     KP    + +++  C     A+++GKQ HA  IK   +  L +S+ L+ MY+K 
Sbjct: 109 QLLYRIEKPYASIYLTLLKFCLK-QRALKEGKQVHA-HIKTSGSIGLYISNRLLDMYAKC 166

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G++  A +VF     RDL SWN MI GY + G+ +KA  +F +M  +    D  ++  +I
Sbjct: 167 GSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAII 222

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYP-----TMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           + C      +E  + + +M  + H Y      T+              M +K    I RM
Sbjct: 223 SGCVQHNRPEEALELYRLM--QKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRM 280

Query: 644 PFAASATVWRTVL---AACRLIS--------LQPHDSAIYVLLSNMYAATGHWQER-ARV 691
              +   VW ++L     C  I         ++  D   +  + + Y   G  +E  A  
Sbjct: 281 GLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALF 340

Query: 692 RKLMN 696
           R LMN
Sbjct: 341 RHLMN 345


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 253/701 (36%), Positives = 387/701 (55%), Gaps = 36/701 (5%)

Query: 163 VLELFHRMQVEGIKPNS------FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           V E    M   GI  N       F     LG L+D  +    +Q     + N  + +   
Sbjct: 76  VHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQR----MANSNKFID-- 129

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N ++ MY   K    A   FD + D+D  +W+++++ Y       EA   F  M   G 
Sbjct: 130 -NCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGI 188

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
               S F ++I        L L +Q+HSQ+++ G   + +I T +   Y KCG + D ++
Sbjct: 189 TPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWL-DGAE 247

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           + +     K+ V+ T ++ G+ +      A+  F +M  EGV  +GF +SIIL A  A+ 
Sbjct: 248 VATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALG 307

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q+H++ IK   E   SVGT L++ YVK    + A + FE I E +  +WSA++A
Sbjct: 308 DLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIA 367

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           GY Q G  + A+++++ + S+GV  N F ++++  AC+A S  +  G Q HA +IK  L 
Sbjct: 368 GYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLI-CGAQIHADAIKKGLV 426

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             L   SA+++MYSK G ++ A + F    K D V+W ++IC +A HG   +AL +FKEM
Sbjct: 427 AYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEM 486

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           +   +  + +TFIG++ AC+H+GLV EG++  D M +E+ + PT++HY+CM+D+YSRAG+
Sbjct: 487 QGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGL 546

Query: 633 LEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNM 678
           L++A+++I  +PF      W+++L  C               +  L P DSA YV++ N+
Sbjct: 547 LQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNL 606

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           YA  G W E A+ RK+M +R ++KE   SWI VK K + F+ GD  HPQ+ QIYSKL+EL
Sbjct: 607 YALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKEL 666

Query: 739 STRLKDAGYK-PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           +   K +  +  +    L D   E KE +L  HSERLAIA+GL+ T A  P+ + KN R 
Sbjct: 667 NFSFKKSKERLLNEENALCDF-TERKEQLL-DHSERLAIAYGLICTAADTPIMVFKNTRS 724

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH   K +S +  R++VVRD NRFHH   G CSC DYW
Sbjct: 725 CKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 263/542 (48%), Gaps = 8/542 (1%)

Query: 71  RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE 130
           ++G+ +   +   + K CG L     G+  H    +   +    +   ++ +Y    +  
Sbjct: 85  KVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMANSNKF-IDNCILKMYCDCKSFT 143

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
              R FD + + ++ SW++++S Y      D  + LF RM   GI PNS  FST++    
Sbjct: 144 SAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFT 203

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
           D  ++    Q+H+ +I+ G     S+   + +MY+K   +  A    + M  ++++    
Sbjct: 204 DPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTG 263

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           ++ GY     + +A   F  M   G EL    F  ++K CA   +L   +Q+HS  +K G
Sbjct: 264 LMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG 323

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           ++ + ++ T L+  Y KC + E A + F  + E  D  SW+A+I+G+ Q+G  D A+  F
Sbjct: 324 LESEVSVGTPLVDFYVKCARFEAARQAFESIHEPND-FSWSALIAGYCQSGQFDRALEVF 382

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
             +  +GV  N F Y+ I  A  AVS      Q+HA  IK       S  +A+++ Y K 
Sbjct: 383 KAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKC 442

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G +D A + F  ID+ D VAW+A++  +A  G    A+++++++   GV+PN  TF  ++
Sbjct: 443 GQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLL 502

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRD 545
           NAC+      E  K   + S +  +N  +   + ++ +YS+ G ++ A EV +    + D
Sbjct: 503 NACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPD 562

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           ++SW S++ G   H + +  +     + R D   D  T++ +      AG  DE  Q+  
Sbjct: 563 VMSWKSLLGGCWSHRNLEIGMIAADNIFRLD-PLDSATYVIMFNLYALAGKWDEAAQFRK 621

Query: 606 IM 607
           +M
Sbjct: 622 MM 623



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 212/430 (49%), Gaps = 11/430 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK--TCG 89
           +  FD+   ++   ++ ++  Y  +    EA+ LFL +  LG+    S  S+++   T  
Sbjct: 146 ERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDP 205

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            + D   G+Q+H + ++ GFA ++++ T + ++Y++   ++      + M   N V+ T 
Sbjct: 206 SMLD--LGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTG 263

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+ GY +   N   L LF +M  EG++ + F FS +L   A  G + T  Q+H+  IK G
Sbjct: 264 LMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG 323

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E   SV   L+  Y+K      AR  F+ + + +  +W++++AGY  +     A E F 
Sbjct: 324 LESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFK 383

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +   G  L    + ++ + C+   +L    Q+H+  +K G+    +  + ++  YSKCG
Sbjct: 384 AIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCG 443

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +++ A + F +  +  D V+WTA+I  H  +G    A+  F +M   GVRPN  T+  +L
Sbjct: 444 QVDYAHQAF-LTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLL 502

Query: 390 TAQPAVSPFQVHAHIIKTNYEK-----SFSVGTALLNAYVKKGILDEAAKVFE-LIDEKD 443
            A       +    I+ +  ++     +      +++ Y + G+L EA +V   L  E D
Sbjct: 503 NACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPD 562

Query: 444 IVAWSAMLAG 453
           +++W ++L G
Sbjct: 563 VMSWKSLLGG 572


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/755 (33%), Positives = 412/755 (54%), Gaps = 70/755 (9%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y   N + D  R+F+ ++    ++W S++  Y  + +  + L  F  M   G+ P+   
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD-------AR 234
           F +VL   A    +     +H  +I+ G +      NAL++MY K + ++        A 
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170

Query: 235 AVFDGMEDRD-SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
            V D M +R  S+   S++ G               N G   +++    +    +     
Sbjct: 171 QVLDEMTERTRSVRTASVLVG---------------NQGRKVSDIEAFNYDVSCR----- 210

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS---------KIFSMMREM 344
                +R+  +QVL+  ID+        M A +   +++D S         KIF MM E 
Sbjct: 211 -----SREFEAQVLE--IDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPE- 262

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF------ 398
           KD+VSW  +I+G+ +NG     +    +M    ++P+ FT S +L   P ++        
Sbjct: 263 KDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVL---PLIAENVDISKG 319

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            ++H   I+   +    V ++L++ Y K   + ++ +VF L+ E+D ++W++++AG  Q 
Sbjct: 320 KEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQN 379

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G  +  +K +RQ+    +KP  ++FSS++ AC A    +  GKQ H    +   +  + +
Sbjct: 380 GLFDEGLKFFRQMLMAKIKPKSYSFSSIMPAC-AHLTTLHLGKQLHGYITRNGFDENIFI 438

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           +S+LV MY+K GNI +A ++F R R RD+VSW +MI G A HGH   A+E+F++M+ + +
Sbjct: 439 ASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGI 498

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           E + + F+ V+TAC+HAGLVDE  +YF+ M  +  I P +EHY+ + DL  RAG LE+A 
Sbjct: 499 EPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAY 558

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
           D I  MP   + +VW T+L+ACR              ++ + P ++  Y+LL+N+Y+A  
Sbjct: 559 DFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAAR 618

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W+E A+ R  +    ++K    SWIEV+NK Y+F+AGD SHP   +I   +E L   ++
Sbjct: 619 RWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELME 678

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
             GY PDTS V  D+++E K+ ++  HSERLAI FG++ TPAG  +++ KNLRVC DCHT
Sbjct: 679 KEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHT 738

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             K ISK+  R+IVVRD +RFHHFK G CSCGDYW
Sbjct: 739 ATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/494 (23%), Positives = 240/494 (48%), Gaps = 31/494 (6%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           Y    L  ++L  F+G+   GL    +   SVLK C  L D   G  +H   ++ G   D
Sbjct: 83  YTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFD 142

Query: 113 VNVSTSLVDLYMRTNNVEDGRR-------VFDDMNE-SNVVSWTSLLSGYARNKMNDRVL 164
           +    +L+++Y +   ++   R       V D+M E +  V   S+L G    K++D   
Sbjct: 143 LYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVSD--- 199

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
                  +E    +    S        E       +   M   N G+ +  + +++    
Sbjct: 200 -------IEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSM---- 248

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
                V   R +F+ M ++D ++WN+++AG   N L+ E       MG A  +    T  
Sbjct: 249 ----SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLS 304

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           SV+ L A   ++   +++H   ++ G+D +  + + L+  Y+KC ++ D+ ++F+++ E 
Sbjct: 305 SVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTE- 363

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
           +D +SW ++I+G +QNG  D  + FF QM    ++P  +++S I+ A   ++      Q+
Sbjct: 364 RDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQL 423

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H +I +  ++++  + ++L++ Y K G +  A ++F+ +  +D+V+W+AM+ G A  G  
Sbjct: 424 HGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHA 483

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
             A++++ Q+ +EG++PN   F +V+ AC+      E  K F++ ++   +   +   +A
Sbjct: 484 LDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAA 543

Query: 521 LVTMYSKKGNIESA 534
           +  +  + G +E A
Sbjct: 544 VSDLLGRAGRLEEA 557



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 230/488 (47%), Gaps = 55/488 (11%)

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
           + A Q+H  V+K     + ++ + L+S+Y    ++ D+  +F+ +    ++ W S++  Y
Sbjct: 25  SQAQQLHAQVLKFQASSLCNL-SLLLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCY 83

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
            ++ L  ++  +F  M  +G     + F SV+K CA   +L L   LH  +++ G+DFD 
Sbjct: 84  TSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDL 143

Query: 316 NIRTGLMVAYSKCGKMED-------ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
                LM  YSK   ++        AS++   M E    V   +++ G+      D+   
Sbjct: 144 YTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVSDI--- 200

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE--------KSFSVGTALL 420
                         F Y +   ++      +  A +++ +Y+        ++ ++G  + 
Sbjct: 201 ------------EAFNYDVSCRSR------EFEAQVLEIDYKPRSEYREMEACNLGQQIK 242

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           +      + D   K+FE++ EKD+V+W+ ++AG A+ G     + + R++    +KP+ F
Sbjct: 243 DISHSMSV-DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSF 301

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T SSV+    A +  + +GK+ H CSI+  L+  + V+S+L+ MY+K   +  +  VF  
Sbjct: 302 TLSSVL-PLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTL 360

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
             +RD +SWNS+I G  Q+G   + L+ F++M    ++    +F  ++ AC H   +  G
Sbjct: 361 LTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 420

Query: 601 QQYFDIMVNEHHIYPTMEHY-------SCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
           +Q         H Y T   +       S +VD+Y++ G +  A  I +RM      + W 
Sbjct: 421 KQL--------HGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVS-WT 471

Query: 654 TVLAACRL 661
            ++  C L
Sbjct: 472 AMIMGCAL 479



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 163/336 (48%), Gaps = 1/336 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+  P+++ V +N ++    R+ L+ E L +   +    L     TLSSVL      
Sbjct: 254 RKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAEN 313

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G+++H   ++ G   +V V++SL+D+Y +   V D  RVF  + E + +SW S++
Sbjct: 314 VDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSII 373

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G  +N + D  L+ F +M +  IKP S++FS+++   A    +    Q+H  + +NG +
Sbjct: 374 AGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFD 433

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + ++L+ MY K   +R AR +FD M  RD ++W +M+ G   +   ++A E F  M
Sbjct: 434 ENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQM 493

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
              G E     F++V+  C+    +  A +  +S  L  GI         +     + G+
Sbjct: 494 KTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGR 553

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +E+A      M        W  ++S    +  +D+A
Sbjct: 554 LEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMA 589



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/396 (19%), Positives = 170/396 (42%), Gaps = 41/396 (10%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T +   S+++   + K    A+QLH+QVLK       N+   L + YS    + D+ ++F
Sbjct: 7   TEALVNSLLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSI-YSHINLLHDSLRLF 65

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           + +      ++W ++I  +  +G    ++  F  M   G+ P+   +  +L A   +   
Sbjct: 66  NTL-HFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDL 124

Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK--------VFELIDEKDIVA 446
                +H +II+   +     G AL+N Y K   L ++ +        + E+ +    V 
Sbjct: 125 NLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVR 184

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            +++L G    G     ++ +    S   +  EF  + V+     P +   + ++  AC+
Sbjct: 185 TASVLVG--NQGRKVSDIEAFNYDVS--CRSREFE-AQVLEIDYKPRS---EYREMEACN 236

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +  ++ +            S   +++S  ++F+   ++DLVSWN++I G A++G   + L
Sbjct: 237 LGQQIKD-----------ISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETL 285

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE---HHIYPTMEHYSCM 623
            + +EM   +L+ D  T   V+        + +G++     + +     +Y      S +
Sbjct: 286 TMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVA----SSL 341

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           +D+Y++   +  +  +   +        W +++A C
Sbjct: 342 IDMYAKCTRVVDSYRVFTLLT-ERDGISWNSIIAGC 376


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/658 (34%), Positives = 373/658 (56%), Gaps = 21/658 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  ++  G +    +   LI        +  AR VFD +       WN+++ GY  N 
Sbjct: 39  QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A   ++ M LA       TF  ++K C     L++ R +H+QV + G + D  ++ 
Sbjct: 99  HFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQN 158

Query: 320 GLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           GL+  Y+KC ++  A  +F  +    + +VSWTA++S + QNG    A+  F QM +  V
Sbjct: 159 GLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDV 218

Query: 379 RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           +P+      +L A   +   +    +HA ++K   E    +  +L   Y K G +  A  
Sbjct: 219 KPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKI 278

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F+ +   +++ W+AM++GYA+ G  + A+ ++ ++ ++ V+P+  + +S I+AC A   
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISAC-AQVG 337

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           ++EQ +       ++   + + +SSAL+ M++K G++E A  VF R   RD+V W++MI 
Sbjct: 338 SLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIV 397

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY  HG  ++A+ +++ M R  +  + +TF+G++ AC H+G+V EG  +F+ M  +H I 
Sbjct: 398 GYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKIN 456

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  +HY+C++DL  RAG L++A ++I  MP     TVW  +L+AC+              
Sbjct: 457 PQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQ 516

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L S+ P ++  YV LSN+YAA   W   A VR  M ++ + K+ G SW+EV+ +   F  
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRV 576

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           GD SHP+  +I  ++E + +RLK+ G+  +    L D++DE  E  L  HSER+ IA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGL 636

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++TP G  L+I KNLR C +CH   KLISKL  R+IVVRDTNRFHHFK+G+CSCGDYW
Sbjct: 637 ISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 237/473 (50%), Gaps = 9/473 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQ+H   +  G      + T L+       ++   R+VFDD+    V  W +++ GY+RN
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 L ++ +MQ+  + P+SFTF  +L        +     VH  V + G E    V 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 218 NALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           N LI++Y K + +  AR VF+G  + +R  ++W ++V+ Y  N   +EA E F+ M    
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            +      VSV+      ++L   R +H+ V+K G++ + ++   L   Y+KCG++  A 
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F  M+   +++ W AMISG+ +NG    A++ F +M  + VRP+  + +  ++A   V
Sbjct: 278 ILFDKMKS-PNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQV 336

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              +    +  ++ +++Y     + +AL++ + K G ++ A  VF+   ++D+V WSAM+
Sbjct: 337 GSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMI 396

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            GY   G    A+ +YR +  +GV PN+ TF  ++ AC   S  V +G  F       K+
Sbjct: 397 VGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNH-SGMVREGWWFFNRMADHKI 455

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTK 563
           N      + ++ +  + G+++ A EV K    +  V+ W +++    +H H +
Sbjct: 456 NPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 177/362 (48%), Gaps = 3/362 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P+     +N ++  Y R++  Q+AL ++  ++   +     T   +LK CG L
Sbjct: 73  RQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGL 132

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--DMNESNVVSWTS 149
                GR VH +  + GF  DV V   L+ LY +   +   R VF+   + E  +VSWT+
Sbjct: 133 SHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTA 192

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++S YA+N      LE+F +M+   +KP+     +VL        +     +H  V+K G
Sbjct: 193 IVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMG 252

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    +  +L +MY K   V  A+ +FD M+  + I WN+M++GY  N    +A + F+
Sbjct: 253 LETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFH 312

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M          +  S I  CA    L  AR +   V ++    D  I + L+  ++KCG
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCG 372

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E A  +F    + +DVV W+AMI G+  +G    A++ +  M R+GV PN  T+  +L
Sbjct: 373 SVECARSVFDRTLD-RDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL 431

Query: 390 TA 391
            A
Sbjct: 432 IA 433



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 153/328 (46%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P+R  V +  ++  Y ++    EAL +F  +R++ +      L SVL    CL D   GR
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGR 242

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
            +H   +K G   + ++  SL  +Y +   V   + +FD M   N++ W +++SGYA+N 
Sbjct: 243 SIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                ++LFH M  + ++P++ + ++ +   A  G +  A  +   V ++       + +
Sbjct: 303 FAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISS 362

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI M+ K   V  AR+VFD   DRD + W++M+ GY  +    EA   +  M   G   
Sbjct: 363 ALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHP 422

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              TF+ ++  C  +  +R      +++  + I+        ++    + G ++ A ++ 
Sbjct: 423 NDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVI 482

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLA 366
             M     V  W A++S   ++  ++L 
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELG 510



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 146/302 (48%), Gaps = 33/302 (10%)

Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           T  G+  + F  S+I ++       Q+HA ++    + S  + T L++A    G +  A 
Sbjct: 14  TNSGIHSDSFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFAR 73

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF+ +    +  W+A++ GY++    + A+ +Y ++    V P+ FTF  ++ AC   S
Sbjct: 74  QVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLS 133

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK--RQRKRDLVSWNS 551
             ++ G+  HA   +      + V + L+ +Y+K   +  A  VF+     +R +VSW +
Sbjct: 134 -HLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTA 192

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT-----------HAGLVDEG 600
           ++  YAQ+G   +ALE+F +MR+ D++ D +  + V+ A T           HA ++  G
Sbjct: 193 IVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMG 252

Query: 601 -QQYFDIMVNEHHIY------------------PTMEHYSCMVDLYSRAGMLEKAMDIIN 641
            +   D++++ + +Y                  P +  ++ M+  Y++ G  + A+D+ +
Sbjct: 253 LETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFH 312

Query: 642 RM 643
            M
Sbjct: 313 EM 314


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/657 (37%), Positives = 380/657 (57%), Gaps = 26/657 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVT 257
           Q+H   +K        V + L+++Y   K+  +  AR++FD ++ R  I WN+++  YV 
Sbjct: 31  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90

Query: 258 NELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           N+   +    F+   L    L  + T   VIK CA    ++  +Q+H   LK G   D  
Sbjct: 91  NQFSHDGIVLFHE--LVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 148

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           ++  L+  YSKCG+++ A K+F  M + KDVV W ++I G+ + G ID+A+  F +M   
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGMID-KDVVLWNSLIDGYARCGEIDIALQLFEEMPER 207

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
               + F++++++         +    +      ++     A++N Y+K G  D A ++F
Sbjct: 208 ----DAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELF 263

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             +   D+V W+ M+AGY   G    AVK++  +   G +P+  T  SV++A +   A +
Sbjct: 264 YQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG-LAVL 322

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
            +G+  H+   K        + ++L+ MY+K G IESA  VF+  +K+ +  W ++I G 
Sbjct: 323 GKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGL 382

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
             HG    AL +F EM +  L+ + I FIGV+ AC HAGLVD+G+QYFD+M+NE+ I PT
Sbjct: 383 GIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPT 442

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLI 662
           +EHY C+VD+  RAG LE+A + I  MP + +  +W ++L              AA R+I
Sbjct: 443 LEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVI 502

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            + P     Y+LLSNMYAA+G W++ + VR++M  R  +K+ G S +E K   + F+ GD
Sbjct: 503 EVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGD 562

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE-HKEAILSQHSERLAIAFGLV 781
           ISHPQ+ +IY+K+ E+  +LK  G+ PDT+ VL  I+ E  KEA L  HSERLAIAFGL+
Sbjct: 563 ISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLI 622

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
               G P++I+KNLRVC DCH+V KL+SK+  R+I+VRD  RFHHFK G CSC DYW
Sbjct: 623 NVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 230/473 (48%), Gaps = 23/473 (4%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYM--RTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            Q+H   +K+       VS+ L+ LY   + N++   R +FD +   +++ W +++  Y 
Sbjct: 30  EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            N+ +   + LFH +  E + P++FT   V+   A  G+V    Q+H + +K G      
Sbjct: 90  ENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 148

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-TNELHMEAFETFNNMGLA 274
           V  +L++MY K   +  AR VFDGM D+D + WNS++ GY    E+ + A + F  M   
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDI-ALQLFEEMPER 207

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMED 333
            A  + +  V  +  C   +    AR+L  Q+  +N + ++  I       Y K G  + 
Sbjct: 208 DA-FSWTVLVDGLSKCGKVES---ARKLFDQMPCRNLVSWNAMIN-----GYMKSGDFDS 258

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  M  + D+V+W  MI+G+  NG    AV  F  M + G RP+  T   +L+A  
Sbjct: 259 ALELFYQM-PIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS 317

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++       +H+++ K  +E    +GT+L+  Y K G ++ A  VF  I +K +  W+A
Sbjct: 318 GLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTA 377

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI-K 508
           ++ G    G    A+ ++ ++   G+KPN   F  V+NAC   +  V+ G+Q+    + +
Sbjct: 378 IIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNH-AGLVDDGRQYFDMMMNE 436

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
            K+   L     LV +  + G++E A    +      + V W S++ G   HG
Sbjct: 437 YKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 489



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 218/429 (50%), Gaps = 18/429 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FDR  +R+ + +N ++  Y  +    + + LF  +    LP    TL  V+K C  L
Sbjct: 67  RSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARL 125

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +K GF  DV V  SLV++Y +   ++  R+VFD M + +VV W SL+
Sbjct: 126 GVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLI 185

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGG 210
            GYAR    D  L+LF  M     + ++F+++ ++  L+  G V +A ++   M  +N  
Sbjct: 186 DGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRN-- 239

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +V+   NA+I+ Y+KS     A  +F  M   D +TWN M+AGY  N   M+A + F  
Sbjct: 240 -LVSW--NAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFM 296

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G+  + +T VSV+   +    L   R +HS + KNG + D  + T L+  Y+KCG 
Sbjct: 297 MLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 356

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A  +F  +++ K V  WTA+I G   +G  + A+  F +M + G++PN   +  +L 
Sbjct: 357 IESALTVFRAIQK-KKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLN 415

Query: 391 A---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKDI 444
           A      V   + +  ++   Y  E +      L++   + G L+EA    E +    + 
Sbjct: 416 ACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNK 475

Query: 445 VAWSAMLAG 453
           V W ++L G
Sbjct: 476 VIWMSLLGG 484



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 5/165 (3%)

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYS--KKGNIESASEVFKRQRKRDLVSWNS 551
            A ++ +Q HA S+K  + N   VSS L+ +YS  K  ++  A  +F R ++R L+ WN+
Sbjct: 24  CAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNT 83

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +I  Y ++  +   + +F E+  + L  D  T   VI  C   G+V EG+Q   + +   
Sbjct: 84  IIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARLGVVQEGKQIHGLALKIG 142

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
                    S +V++YS+ G ++ A  + + M       +W +++
Sbjct: 143 FGSDVFVQGS-LVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLI 185


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/679 (36%), Positives = 395/679 (58%), Gaps = 28/679 (4%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +S+++   A    + T   VHT VIK+G    + + + LI  Y+K   + +AR +FD + 
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSY-SFLGHKLIDGYIKCGSLAEARKLFDELP 62

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            R  +TWNSM++ ++++    EA E + NM + G      TF ++ K  +    +R  ++
Sbjct: 63  SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122

Query: 302 LHSQVLKNGID-FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            H   +  G++  D  + + L+  Y+K  KM DA  +F  + E KDVV +TA+I G+ Q+
Sbjct: 123 AHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLE-KDVVLFTALIVGYAQH 181

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQPAVSPFQVHAHIIKTNYEKSFSVG 416
           G    A+  F  M   GV+PN +T + IL         V+   +H  ++K+  E   +  
Sbjct: 182 GLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQ 241

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           T+LL  Y +  +++++ KVF  +D  + V W++ + G  Q G  E AV I+R++    + 
Sbjct: 242 TSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSIS 301

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PN FT SS++ AC++  A +E G+Q HA ++K  L+      +AL+ +Y K GN++ A  
Sbjct: 302 PNPFTLSSILQACSSL-AMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARS 360

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF    + D+V+ NSMI  YAQ+G   +ALE+F+ ++   L  +G+TFI ++ AC +AGL
Sbjct: 361 VFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGL 420

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN--RMPFAASATVWRT 654
           V+EG Q F  + N H+I  T++H++CM+DL  R+  LE+A  +I   R P      +WRT
Sbjct: 421 VEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNP---DVVLWRT 477

Query: 655 VLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
           +L +C              +++ L P D   ++LL+N+YA+ G W +   ++  + D K+
Sbjct: 478 LLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKL 537

Query: 701 KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           KK    SW++V  + ++F+AGD+SHP+S +I+  L  L  ++K  GY P+T +VLQD+D+
Sbjct: 538 KKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDE 597

Query: 761 EHKEAILSQHSERLAIAFGLVATPA-GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           E K + L  HSE+LAIA+ L  T      ++I KNLRVCGDCH+ IK +S L  RDI+ R
Sbjct: 598 EKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIAR 657

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D+ RFHHFK GLCSC DYW
Sbjct: 658 DSKRFHHFKGGLCSCKDYW 676



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 265/482 (54%), Gaps = 11/482 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R VH   +KSGF+    +   L+D Y++  ++ + R++FD++   ++V+W S++S +  +
Sbjct: 21  RAVHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISH 79

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS-V 216
             +   +E +  M +EG+ P+++TFS +    +  G++    + H + +  G EV+   V
Sbjct: 80  GKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFV 139

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            +AL+ MY K   +RDA  VF  + ++D + + +++ GY  + L  EA + F +M   G 
Sbjct: 140 ASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGV 199

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    T   ++  C    +L   + +H  V+K+G++     +T L+  YS+C  +ED+ K
Sbjct: 200 KPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIK 259

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F+ + +  + V+WT+ + G +QNG  ++AV+ F +M R  + PN FT S IL A  +++
Sbjct: 260 VFNQL-DYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLA 318

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q+HA  +K   + +   G AL+N Y K G +D+A  VF+++ E D+VA ++M+ 
Sbjct: 319 MLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIY 378

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            YAQ G    A++++ +L + G+ PN  TF S++ AC   +  VE+G Q  A SI+   N
Sbjct: 379 AYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACN-NAGLVEEGCQIFA-SIRNNHN 436

Query: 513 NALCVS--SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
             L +   + ++ +  +   +E A+ + +  R  D+V W +++     HG  + A +V  
Sbjct: 437 IELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMS 496

Query: 571 EM 572
           ++
Sbjct: 497 KI 498



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 219/445 (49%), Gaps = 7/445 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P R+ V +N ++  +      +EA+  +  +   G+     T S++ K    L
Sbjct: 55  RKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQL 114

Query: 92  FDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G++ H   V  G    D  V+++LVD+Y + + + D   VF  + E +VV +T+L
Sbjct: 115 GLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTAL 174

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GYA++ ++   L++F  M   G+KPN +T + +L    + G +     +H +V+K+G 
Sbjct: 175 IVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGL 234

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E V +   +L++MY +  M+ D+  VF+ ++  + +TW S V G V N     A   F  
Sbjct: 235 ESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFRE 294

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M          T  S+++ C++   L +  Q+H+  +K G+D +      L+  Y KCG 
Sbjct: 295 MIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGN 354

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           M+ A  +F ++ E+ DVV+  +MI  + QNG    A+  F ++   G+ PNG T+  IL 
Sbjct: 355 MDKARSVFDVLTEL-DVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILL 413

Query: 391 AQPAVSPFQVHAHI---IKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDEKDIV 445
           A       +    I   I+ N+    ++   T +++   +   L+EAA + E +   D+V
Sbjct: 414 ACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVV 473

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQL 470
            W  +L      G+ E A K+  ++
Sbjct: 474 LWRTLLNSCKIHGEVEMAEKVMSKI 498



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 17/132 (12%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC- 88
           K +S+FD   + + V  N +++ Y ++    EAL LF  ++ +GL   G T  S+L  C 
Sbjct: 357 KARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACN 416

Query: 89  -------GC-LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
                  GC +F  +  R  H           ++  T ++DL  R+  +E+   + +++ 
Sbjct: 417 NAGLVEEGCQIFASI--RNNH------NIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR 468

Query: 141 ESNVVSWTSLLS 152
             +VV W +LL+
Sbjct: 469 NPDVVLWRTLLN 480


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/561 (41%), Positives = 348/561 (62%), Gaps = 23/561 (4%)

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            R++HS++   G       + GL+  Y+KCG +++A  IF+ + E + VVSW+AMI  + 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILE-RTVVSWSAMIGAYA 62

Query: 359 QNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSF 413
            +G    A+  F +M  +G V PN  T++ +  A   +   +    +HA  + +   KS 
Sbjct: 63  LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122

Query: 414 S--VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           +  +  ALLN YV+ G L+EA KVF+ +D  D  +W++M+    +  +   A++++ ++ 
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMN 182

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
            EG+ P   T +SV+NAC A S A++ GKQ H+    +  ++++   +AL+ MY+K G++
Sbjct: 183 LEGIPPTSVTLASVLNAC-ACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSL 241

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           E +S+VF     R+ VSW +MI   AQHG   +ALE+FKEM  + +  D  TFI V+ AC
Sbjct: 242 ECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRAC 301

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           +HAGL+ E  ++F  MV ++ I PT  HY   +D   RAG L+ A ++I+ MPF      
Sbjct: 302 SHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLT 361

Query: 652 WRTVLAACRLIS--------------LQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
           W+T+L ACR+ S              L P DS  Y LL N+YAATG + ++ RVRK M D
Sbjct: 362 WKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTD 421

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
           R +KK  G S+IEVKNK + F+AGD +HP  ++I  +LE+L  R+++AGY P+T  VL  
Sbjct: 422 RGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHA 481

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           +++E KE ++  HSE+LAIAFGL+ATP G PL IVKNLRVC DCH   K+I+K+ RR IV
Sbjct: 482 VNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIV 541

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           VRDT+RFHHF++G CSC DYW
Sbjct: 542 VRDTHRFHHFEDGQCSCKDYW 562



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 177/321 (55%), Gaps = 19/321 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR++H      GF R       LV +Y +   +++ R +F+ + E  VVSW++++  YA 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 157 NKMNDRVLELFHRMQVEG-IKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEV 212
           +      L LFHRM+ +G ++PN+ TF+ V    GV+ D   +    ++H + + + GE+
Sbjct: 64  HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIED---LEQGREIHALAMAS-GEL 119

Query: 213 VTS---VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +S   + NAL++MY++   + +AR VFD M+  D+ +W SM+     N   +EA E F+
Sbjct: 120 KSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFH 179

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M L G   T  T  SV+  CA +  L++ +Q+HS++  +G       +T L+  Y+KCG
Sbjct: 180 RMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG 239

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E +SK+F+ M E ++ VSWTAMI+   Q+G  D A+  F +M  EG+  +  T+  +L
Sbjct: 240 SLECSSKVFTAM-ETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVL 298

Query: 390 TAQPAVSPFQVHAHIIKTNYE 410
            A         HA +IK + E
Sbjct: 299 RACS-------HAGLIKESLE 312



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 167/340 (49%), Gaps = 26/340 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCGC 90
           +++F+   +R  V ++ ++  Y      QEAL LF  +R  G +     T + V   CG 
Sbjct: 40  RAIFNGILERTVVSWSAMIGAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGV 99

Query: 91  LFDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           + D   GR++H   + SG  +  N  +  +L+++Y+R  ++E+ R+VFD M+  +  SWT
Sbjct: 100 IEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWT 159

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S+++    N      LELFHRM +EGI P S T ++VL   A  G +    Q+H+ +  +
Sbjct: 160 SMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDAS 219

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G         AL+ MY K   +  +  VF  ME R+S++W +M+A    +    EA E F
Sbjct: 220 GFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELF 279

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS-- 326
             M L G     +TF+ V++ C+           H+ ++K  ++F H++     +A +  
Sbjct: 280 KEMNLEGMVADATTFICVLRACS-----------HAGLIKESLEFFHSMVEDYAIAPTET 328

Query: 327 ----------KCGKMEDASKIFSMMREMKDVVSWTAMISG 356
                     + G+++DA ++   M    + ++W  +++ 
Sbjct: 329 HYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNA 368



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 7/168 (4%)

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +E+G++ H+       + A    + LV+MY+K G ++ A  +F    +R +VSW++MI  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 556 YAQHGHTKKALEVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           YA HG  ++AL +F  MR    +E + +TF GV  AC     +++G++   + +    + 
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 615 PT---MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
            +   +E  + ++++Y R G LE+A  + + M     A  W +++ AC
Sbjct: 121 SSNAILE--NALLNMYVRCGSLEEARKVFDTMDH-PDAFSWTSMITAC 165


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/542 (41%), Positives = 341/542 (62%), Gaps = 23/542 (4%)

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
           HNI   L+  + + G ++ A K+F  M E ++V +W AM+SG +Q    +  +  F +M 
Sbjct: 26  HNI---LINGHVQHGDLDSAIKVFDEMLE-RNVATWNAMVSGLIQFEFNENGLFLFREMH 81

Query: 375 REGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
             G  P+ FT   +L      + + +  QVHA+++K  YE +  VG++L + Y+K G L 
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLG 141

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           E  KV + +  +++VAW+ ++AG AQ G  EG + +Y  +   G++P++ T  SVI++ +
Sbjct: 142 EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISS-S 200

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A  A + QG+Q HA +IKA  N+A+ V S+L++MYSK G +E + +        D V W+
Sbjct: 201 AELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWS 260

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           SMI  Y  HG  ++A+ +F++M ++ L  + +TF+ ++ AC+H GL ++G  +F +MV +
Sbjct: 261 SMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEK 320

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------- 661
           + + P +EHY+C+VDL  R+G L++A  +I  MP  A   +W+T+L+ACR+         
Sbjct: 321 YGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATR 380

Query: 662 -----ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTY 716
                + L P DSA YVLLSN++A+   W++ ++VR  M DR VKKE G SW+EVKN+ +
Sbjct: 381 TAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVF 440

Query: 717 SFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAI 776
            F  GD SHP S +I   L+EL   +K  GY PDT+ V  D D E KE  L  HSE+LAI
Sbjct: 441 QFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAI 500

Query: 777 AFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
           AFGL+  P G+P++++KNLR+C DCH  IKLIS +  R+I+VRDT+RFHHFK G CSCGD
Sbjct: 501 AFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGD 560

Query: 837 YW 838
           YW
Sbjct: 561 YW 562



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 11/350 (3%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R++     L++ +++  +++   +VFD+M E NV +W +++SG  + + N+  L LF  M
Sbjct: 21  RNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREM 80

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              G  P+ FT  +VL   A         QVH  V+K G E    V ++L  MY+KS  +
Sbjct: 81  HELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSL 140

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            +   V   M  R+ + WN+++AG   N       + +N M ++G    + T VSVI   
Sbjct: 141 GEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSS 200

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A    L   +Q+H++ +K G +    + + L+  YSKCG +ED+ K   +  E  D V W
Sbjct: 201 AELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKAL-LDCEHPDSVLW 259

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAH 403
           ++MI+ +  +G  + AV+ F QM +EG+  N  T+  +L A       +  +  F++   
Sbjct: 260 SSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKL--M 317

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEA-AKVFELIDEKDIVAWSAMLA 452
           + K   +      T +++   + G LDEA A +  +  E D+V W  +L+
Sbjct: 318 VEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLS 367



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 3/324 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD   +RN   +N ++    +   ++  L LF  +  LG      TL SVL+ C  L  
Sbjct: 45  VFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRA 104

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+QVH   +K G+  ++ V +SL  +YM++ ++ +G +V   M   NVV+W +L++G
Sbjct: 105 SYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAG 164

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            A+N   + VL+L++ M++ G++P+  T  +V+   A+   +    Q+H   IK G    
Sbjct: 165 NAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSA 224

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +V ++LISMY K   + D+       E  DS+ W+SM+A Y  +    EA   F  M  
Sbjct: 225 VAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQ 284

Query: 274 AGAELTRSTFVSVIKLCATT--KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            G      TF+S++  C+    KE  +       V K G+       T ++    + G +
Sbjct: 285 EGLGGNDVTFLSLLYACSHNGLKEKGMGF-FKLMVEKYGLKPRLEHYTCVVDLLGRSGCL 343

Query: 332 EDASKIFSMMREMKDVVSWTAMIS 355
           ++A  +   M    DVV W  ++S
Sbjct: 344 DEAEAMIRSMPLEADVVIWKTLLS 367



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 39/296 (13%)

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY K G I+ A   F     R+++S N +I G+ QHG    A++VF EM    LE +  T
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEM----LERNVAT 56

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  +++     GL+      F+   N   ++  M     + D ++   +L     +  R 
Sbjct: 57  WNAMVS-----GLIQ-----FEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGL--RA 104

Query: 644 PFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
            +A    V   VL      +L    S     L++MY  +G   E  +V K M  R V   
Sbjct: 105 SYAGK-QVHAYVLKYGYEFNLVVGSS-----LAHMYMKSGSLGEGEKVIKAMRIRNV--- 155

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHK 763
              +W        + +AG+      N  +  + +L   +K +G +PD   ++  I    +
Sbjct: 156 --VAW-------NTLIAGN----AQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAE 202

Query: 764 EAILSQHSERLAIAFGLVATPAGAPL-QIVKNLRVCGDCHTVIKLISKLERRDIVV 818
            A L Q  +  A A    A  A A L  ++     CG     +K +   E  D V+
Sbjct: 203 LATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVL 258


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/742 (33%), Positives = 414/742 (55%), Gaps = 32/742 (4%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y R  +V   RR FD M   NVVSW+++++ YA+       LELF RM  EG+K N+ T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNG--GEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           F +VL   A  G +A    +H  ++ +G  G+ V  + N +++MY K   V  AR VF+ 
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVI-LGNTIVNMYGKCGEVDLAREVFER 119

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           ME ++++TWN+M+A    ++ + EAF     M L G    + T VSVI  CA  + +   
Sbjct: 120 MEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRG 179

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           R +H  V   G++ D+ +   L+  Y KCGK+  A      + E +D +SWT +++ + +
Sbjct: 180 RIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGI-ETRDKISWTTLLAAYAR 238

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSV 415
           +G    A+    +M  EGV+ + FT+  +L +  A++      ++H  + ++  E    +
Sbjct: 239 HGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVL 298

Query: 416 GTALLNAYVKKGILDEAAKVFE-LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
            TAL++ Y K G  D A + F+ + D +D+  W+A+LA Y      +  + I+ +++ +G
Sbjct: 299 QTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQG 358

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA------LVTMYSKK 528
           V P+  TF S+++AC A  AA+  G+  H+  ++  L +   V+SA      ++ MY+K 
Sbjct: 359 VAPDAVTFLSILDAC-ASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKC 417

Query: 529 GNIESASEVF---KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           G++  A   F   +R R  D+V+W++M+  Y+Q G +++AL  F  M+++ ++ D ++F+
Sbjct: 418 GSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFV 477

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
             I  C+H+GLV E   +F  + ++H I PT  H++C+VDL SRAG + +A  ++ R P 
Sbjct: 478 SAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPL 537

Query: 646 AASATVWRTVLAACR------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
            A  + W T+L+ACR                     + Y LL++++  +  W +    R+
Sbjct: 538 GAHHSTWMTLLSACRTYGDLERARRVAARLASLRSGSAYSLLASVFCLSRKWDDVRNARQ 597

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH-PQSNQIYSKLEELSTRLKDAGYKPDTS 752
            + +R    + G SWIE+ N+ Y F AGD    P+  +I+++LE L   ++ AGY+ D  
Sbjct: 598 SLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPI 657

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
             + D  ++ K+ +LS HSE++A+ FGL++TP G PL+IVKN+ VC DCH VIK IS++ 
Sbjct: 658 KKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVA 717

Query: 813 RRDIVVRDTNRFHHFKEGLCSC 834
            R I +RD   FH F  G CSC
Sbjct: 718 DRVITLRDDRSFHQFSHGSCSC 739



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 251/520 (48%), Gaps = 14/520 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD    RN V ++ ++  Y +     +AL LF+ +   G+     T  SVL  C  L   
Sbjct: 15  FDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITFVSVLDACASLGAI 74

Query: 95  VFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             G+ +H   V  G    DV +  ++V++Y +   V+  R VF+ M   N V+W ++++ 
Sbjct: 75  ALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNTVTWNTMIAA 134

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            +R+        L   M ++G++PN  T  +V+   A    ++    VH +V   G E  
Sbjct: 135 CSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESD 194

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +V NAL+++Y K   +R AR   +G+E RD I+W +++A Y  +     A      M  
Sbjct: 195 NAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDH 254

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +L   TFV++++ C     L L  ++H ++ ++GI+ D  ++T L+  Y KCG  + 
Sbjct: 255 EGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDA 314

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A + F  MR+++DV  W A+++ ++        +  F +M+ +GV P+  T+  IL A  
Sbjct: 315 ARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACA 374

Query: 394 AVSPFQV----HAHIIKTNYEKSFSVG------TALLNAYVKKGILDEAAKVF---ELID 440
           +++   +    H+ +++       +V       T+++N Y K G L +A   F       
Sbjct: 375 SLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRAR 434

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D+VAWSAM+A Y+Q G +E A++ +  +  EGVKP+  +F S I  C+      E   
Sbjct: 435 ASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVA 494

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
            F +      +       + LV + S+ G I  A  + +R
Sbjct: 495 FFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRR 534



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 181/364 (49%), Gaps = 11/364 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+R   +N V +N ++    R   ++EA  L   +   GL     TL SV+  C  +
Sbjct: 114 REVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWM 173

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR VH      G   D  V+ +LV+LY +   +   R   + +   + +SWT+LL
Sbjct: 174 QSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLL 233

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + YAR+    R + +  RM  EG+K +SFTF  +L        +A   ++H  + ++G E
Sbjct: 234 AAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIE 293

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNN 270
           +   +  AL+ MY K      AR  FD M D RD   WN+++A YV  +   E    F  
Sbjct: 294 LDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFAR 353

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-------IRTGLMV 323
           M L G      TF+S++  CA+   L L R  HS++L+ G+ FD         + T ++ 
Sbjct: 354 MSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGL-FDRQAVASADLLTTSVIN 412

Query: 324 AYSKCGKMEDASKIFSMMREMK--DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
            Y+KCG + DA   F+  R  +  DVV+W+AM++ + Q G  + A+  F  M +EGV+P+
Sbjct: 413 MYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPD 472

Query: 382 GFTY 385
             ++
Sbjct: 473 SVSF 476


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/583 (40%), Positives = 346/583 (59%), Gaps = 47/583 (8%)

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           Q+H+ +L+ G+  +  +   L  +Y+  G+++ +  +F+   E  +V S++A+I  H+Q+
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDE-PNVFSFSAIIHSHVQS 123

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY----------- 409
              D A  ++ QM   GV PN FT+S +L +    S   +H   IK              
Sbjct: 124 RLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLV 183

Query: 410 --------------------EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
                               E+S    T +L  Y K G LD+A  +FE + E+D+V W+ 
Sbjct: 184 DVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNV 243

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GYAQ G    ++K++R++      PNE T  +V++AC     A+E G+  H+     
Sbjct: 244 MIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSAC-GQLGALESGRWIHSYIENK 302

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            +   + V +AL+ MYSK G++E A  VF R R +D+V+WNSMI GYA HG ++ AL++F
Sbjct: 303 GIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLF 362

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           +EM     +   ITFIG+++AC H GLV+EG+ +F +M +++ I P +EHY CMV+L  R
Sbjct: 363 EEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGR 422

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG LE+A  ++  M  AA   +W T+L  CR              L+  +  +S  YVLL
Sbjct: 423 AGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLL 482

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SNMYAATG+W+  A++R LM +  ++KE G S IEV NK + F+AG+  HP+S +IY  L
Sbjct: 483 SNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSKEIYVML 542

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
            E+++ LK  GY P T  VL D+ +E KE  L  HSE+LAIAFGL++T  G  ++IVKNL
Sbjct: 543 NEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTVKIVKNL 602

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           RVC DCHTV+K+IS++  R IV+RD NRFHHF++GLCSCGDYW
Sbjct: 603 RVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 204/433 (47%), Gaps = 61/433 (14%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA-----VFDGMEDRDSITWN 249
           VA  +Q+H  +++ G        N +++  L+       R      VF+  ++ +  +++
Sbjct: 60  VAHLLQIHASLLRRG-----LYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFS 114

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           +++  +V + L   AF  ++ M   G E    TF SV+K C+    L   + LH Q +K 
Sbjct: 115 AIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKL 170

Query: 310 GIDFDHNIRTGL-------------------------------MVAYSKCGKMEDASKIF 338
           G+  D  +RTGL                               +  YSK G+++ A  +F
Sbjct: 171 GLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLF 230

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M+E +DVV W  MI G+ Q+G  + ++  F +M      PN  T   +L+A   +   
Sbjct: 231 EGMKE-RDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGAL 289

Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           +    +H++I     + +  VGTAL++ Y K G L++A  VF+ I +KD+VAW++M+ GY
Sbjct: 290 ESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGY 349

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKA 509
           A  G ++ A++++ ++T  G KP + TF  +++AC      VE+G+ F         I+ 
Sbjct: 350 AMHGFSQHALQLFEEMTETGHKPTDITFIGILSAC-GHGGLVEEGRSFFRLMRDKYGIEP 408

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
           K+ +  C    +V +  + G++E A  + K      D V W +++     H + K   E+
Sbjct: 409 KIEHYGC----MVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEI 464

Query: 569 FKEMRRQDLEFDG 581
            K +  Q L   G
Sbjct: 465 AKFLVDQKLANSG 477



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 186/387 (48%), Gaps = 34/387 (8%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H   ++ G   +  ++  L   Y     ++    VF+  +E NV S+++++  + +++
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSR 124

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVL--------GVLADEGI---VATAVQVHTMVIK 207
           + DR    + +M   G++PN+FTFS+VL         VL  + I   + + + V T ++ 
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVD 184

Query: 208 ---NGGEVVTS-------------VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
               GG+VV +                 +++ Y K   +  AR++F+GM++RD + WN M
Sbjct: 185 VYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVM 244

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           + GY  + +  E+ + F  M +A A     T ++V+  C     L   R +HS +   GI
Sbjct: 245 IGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGI 304

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
             + ++ T L+  YSKCG +EDA  +F  +R+ KDVV+W +MI G+  +G    A+  F 
Sbjct: 305 QINVHVGTALIDMYSKCGSLEDARLVFDRIRD-KDVVAWNSMIVGYAMHGFSQHALQLFE 363

Query: 372 QMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKK 426
           +MT  G +P   T+  IL+A      V   +    +++  Y  E        ++N   + 
Sbjct: 364 EMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRA 423

Query: 427 GILDEA-AKVFELIDEKDIVAWSAMLA 452
           G L+EA   V  +    D V W  +L 
Sbjct: 424 GHLEEAYGLVKNMTIAADPVLWGTLLG 450



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 37/289 (12%)

Query: 386 SIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           S+I  ++      Q+HA +++     +  +   L  +Y   G LD +  VF   DE ++ 
Sbjct: 52  SLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVF 111

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           ++SA++  + Q    + A   Y Q+ S GV+PN FTFSSV+ +C+     +E GK  H  
Sbjct: 112 SFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS-----LESGKVLHCQ 166

Query: 506 SIKAKLNNALCVSSALV-------------------------------TMYSKKGNIESA 534
           +IK  L + L V + LV                               T YSK G ++ A
Sbjct: 167 AIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKA 226

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
             +F+  ++RD+V WN MI GYAQ G   ++L++F+ M       + +T + V++AC   
Sbjct: 227 RSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQL 286

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           G ++ G+     + N+  I   +   + ++D+YS+ G LE A  + +R+
Sbjct: 287 GALESGRWIHSYIENK-GIQINVHVGTALIDMYSKCGSLEDARLVFDRI 334



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 153/348 (43%), Gaps = 64/348 (18%)

Query: 16  KQPPKSLRS-----PFYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNL 65
           K P +SL S       YSK     K +SLF+   +R+ V +N ++  Y +  +  E+L L
Sbjct: 201 KMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKL 260

Query: 66  FLGIRRL----GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           F   RR+     +P    T+ +VL  CG L     GR +H      G   +V+V T+L+D
Sbjct: 261 F---RRMLVAKAIP-NEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALID 316

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +  ++ED R VFD + + +VV+W S++ GYA +  +   L+LF  M   G KP   T
Sbjct: 317 MYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDIT 376

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F   +G+L+  G              +GG                  +V + R+ F  M 
Sbjct: 377 F---IGILSACG--------------HGG------------------LVEEGRSFFRLMR 401

Query: 242 DRDSITWNSMVAGYVTNEL----HM-EAFETFNNMGLAGAELTRSTFVSVIKLCATTK-E 295
           D+  I       G + N L    H+ EA+    NM +A   +   T +   +L    K  
Sbjct: 402 DKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLG 461

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
             +A+ L  Q L N   +       L   Y+  G  E  +K+ ++M+E
Sbjct: 462 EEIAKFLVDQKLANSGTY-----VLLSNMYAATGNWEGVAKMRTLMKE 504


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/796 (32%), Positives = 430/796 (54%), Gaps = 60/796 (7%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + VH    K   A D++++ +L+  Y++   V +  +VF  ++  NVVS+T+++SG+A++
Sbjct: 110 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
               + +E+F RM+  GI+ N F+F  +L V      +    Q+H +VIK G    T V 
Sbjct: 168 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 227

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG-LAGA 276
           NAL+ +Y K   +     +FD M  RD  +WN++++  V   ++  AFE F +M  + G 
Sbjct: 228 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 287

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            +   T +S I + A      + R++H+ V+K G + + ++   L+  Y+KCG ++    
Sbjct: 288 RIDHFT-LSTILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVA 346

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVN---------------------------- 368
           +F  MR ++DV++WT MI+ +++ G  DLA+                             
Sbjct: 347 LFEKMR-VRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSK 405

Query: 369 ---FFCQMTREGVRPNGFTYSIILTA-----QPAVSPFQVHAHIIKTNYEKSFSVGTALL 420
              FFC+M  EGV    FT + +L A     +  +S  Q+H  I+K  +  +  +  ALL
Sbjct: 406 ALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISK-QIHGFILKFGFGSNACIEAALL 464

Query: 421 NAYVKKGILDEAAKVFELIDEKDI--VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           +   + G + +A K+F          + W++M+ GYA+    E A+ ++ Q   EG    
Sbjct: 465 DMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVV 524

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           +   S+ +       A  E GKQ H  ++K+   + L V ++++TMYSK  N++ A +VF
Sbjct: 525 DKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVF 584

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH--AGL 596
                 D+VSWN +I G+  H    +AL V+ +M +  ++ D +TF+ +I+A  H  + L
Sbjct: 585 NVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNL 644

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           VD  ++ F  M   +HI PT+EHY+ +V +    G+LE+A ++IN+MP    A+VWR +L
Sbjct: 645 VDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALL 704

Query: 657 AACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            ACR              L++++P D + Y+L+SN+Y+A G W     VR+ M  +  +K
Sbjct: 705 DACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRK 764

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
             G SWI  +NK +SF A D SHPQ+  I+S LE L      AGY PDTS+VL ++++  
Sbjct: 765 HPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQ 824

Query: 763 KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
           K+  L  HS ++A  +GL+ T  G P++IVKN+ +CGDCHT +K +S +  R+I +RD +
Sbjct: 825 KKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDAS 884

Query: 823 RFHHFKEGLCSCGDYW 838
             H F  G CSC DYW
Sbjct: 885 GHHCFLNGQCSCKDYW 900



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 232/486 (47%), Gaps = 41/486 (8%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           N V Y  ++  + + +  ++A+ +F  +R  G+ L   +  ++L  C  L D   G Q+H
Sbjct: 153 NVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLH 212

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
              +K GF     VS +L+ LY +   ++   ++FD+M   ++ SW +++S   +  M +
Sbjct: 213 AIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYE 272

Query: 162 RVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVA-TAVQVHTMVIKNGGEVVTSVCNA 219
           R  ELF  M +++G + + FT ST+L  +A  G+ +    ++H  VIK G E   SV NA
Sbjct: 273 RAFELFRDMRRIDGFRIDHFTLSTIL--VAARGLASMVGREIHAHVIKIGFESNISVINA 330

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-------- 271
           LI  Y K   ++   A+F+ M  RD ITW  M+  Y+   L   A E F+ M        
Sbjct: 331 LIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISY 390

Query: 272 ---------------GLA--------GAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
                           LA        G ELT  T   V+  C    E ++++Q+H  +LK
Sbjct: 391 NAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILK 450

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKI-FSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
            G   +  I   L+   ++CG+M DA K+           + WT+MI G+ +N   + A+
Sbjct: 451 FGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAI 510

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNA 422
           + FCQ   EG        S  +        F     Q+H H +K+ +     VG +++  
Sbjct: 511 SLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITM 570

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K   +D+A KVF ++   DIV+W+ ++AG+      + A+ ++ ++   G+KP+  TF
Sbjct: 571 YSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTF 630

Query: 483 SSVINA 488
             +I+A
Sbjct: 631 VLIISA 636



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 189/396 (47%), Gaps = 43/396 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGCLF 92
           LFD  P R+   +N ++    ++ +++ A  LF  +RR+ G  +   TLS++L     L 
Sbjct: 246 LFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA 305

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED--------------------- 131
             V GR++H   +K GF  +++V  +L+  Y +  +++                      
Sbjct: 306 SMV-GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMIT 364

Query: 132 ----------GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                        VFD M   N +S+ ++LSG+ +N    + L  F RM  EG++   FT
Sbjct: 365 AYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFT 424

Query: 182 FSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV-- 236
            + VL   G+L +  I   + Q+H  ++K G      +  AL+ M  +   + DA+ +  
Sbjct: 425 LTGVLNACGLLMEAKI---SKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFS 481

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT-RSTFVSVIKLCATTKE 295
                   SI W SM+ GY  N    EA   F    L GA +  +    +V+ +C T   
Sbjct: 482 QGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAF 541

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             + +Q+H   LK+G   D  +   ++  YSKC  M+DA K+F++M    D+VSW  +I+
Sbjct: 542 HEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVM-PAHDIVSWNGLIA 600

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           GHL +   D A++ + +M + G++P+  T+ +I++A
Sbjct: 601 GHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISA 636


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 260/795 (32%), Positives = 428/795 (53%), Gaps = 58/795 (7%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + VH    K   A D++++ +L+  Y++   V +  +VF  ++  NVVS+T+++SG+A++
Sbjct: 92  KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 149

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
               + +E+F RM+  GI+ N F+F  +L V      +    Q+H +VIK G    T V 
Sbjct: 150 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVS 209

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG-LAGA 276
           NAL+ +Y K   +     +FD M  RD  +WN++++  V   ++  AFE F +M  + G 
Sbjct: 210 NALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGF 269

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
            +   T +S I + A      + R++H+ V+K G + + ++   L+  Y+KCG ++    
Sbjct: 270 RIDHFT-LSTILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVA 328

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVN---------------------------- 368
           +F  MR ++DV++WT MI+ +++ G  DLA+                             
Sbjct: 329 LFEKMR-VRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSK 387

Query: 369 ---FFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLN 421
              FFC+M  EGV    FT + +L A      A    Q+H  I+K  +  +  +  ALL+
Sbjct: 388 ALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLD 447

Query: 422 AYVKKGILDEAAKVFELIDEKDI--VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
              + G + +A K+F          + W++M+ GYA+    E A+ ++ Q   EG    +
Sbjct: 448 MCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVD 507

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
              S+ +       A  E GKQ H  ++K+   + L V ++++TMYSK  N++ A +VF 
Sbjct: 508 KVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFN 567

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH--AGLV 597
                D+VSWN +I G+  H    +AL V+ +M +  ++ D +TF+ +I+A  H  + LV
Sbjct: 568 VMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLV 627

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           D  ++ F  M   +HI PT+EHY+ +V +    G+LE+A ++IN+MP    A+VWR +L 
Sbjct: 628 DNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLD 687

Query: 658 ACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
           ACR              L++++P D + Y+L+SN+Y+A G W     VR+ M  +  +K 
Sbjct: 688 ACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKH 747

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHK 763
            G SWI  +NK +SF A D SHPQ+  I+S LE L      AGY PDTS+VL ++++  K
Sbjct: 748 PGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQK 807

Query: 764 EAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNR 823
           +  L  HS ++A  +GL+ T  G P++IVKN+ +CGDCHT +K +S +  R+I +RD + 
Sbjct: 808 KDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASG 867

Query: 824 FHHFKEGLCSCGDYW 838
            H F  G CSC DYW
Sbjct: 868 HHCFLNGQCSCKDYW 882



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/486 (27%), Positives = 232/486 (47%), Gaps = 41/486 (8%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           N V Y  ++  + + +  ++A+ +F  +R  G+ L   +  ++L  C  L D   G Q+H
Sbjct: 135 NVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLH 194

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
              +K GF     VS +L+ LY +   ++   ++FD+M   ++ SW +++S   +  M +
Sbjct: 195 AIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYE 254

Query: 162 RVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVA-TAVQVHTMVIKNGGEVVTSVCNA 219
           R  ELF  M +++G + + FT ST+L  +A  G+ +    ++H  VIK G E   SV NA
Sbjct: 255 RAFELFRDMRRIDGFRIDHFTLSTIL--VAARGLASMVGREIHAHVIKIGFESNISVINA 312

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-------- 271
           LI  Y K   ++   A+F+ M  RD ITW  M+  Y+   L   A E F+ M        
Sbjct: 313 LIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISY 372

Query: 272 ---------------GLA--------GAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
                           LA        G ELT  T   V+  C    E ++++Q+H  +LK
Sbjct: 373 NAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILK 432

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKI-FSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
            G   +  I   L+   ++CG+M DA K+           + WT+MI G+ +N   + A+
Sbjct: 433 FGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAI 492

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNA 422
           + FCQ   EG        S  +        F     Q+H H +K+ +     VG +++  
Sbjct: 493 SLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITM 552

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K   +D+A KVF ++   DIV+W+ ++AG+      + A+ ++ ++   G+KP+  TF
Sbjct: 553 YSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTF 612

Query: 483 SSVINA 488
             +I+A
Sbjct: 613 VLIISA 618



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 190/396 (47%), Gaps = 43/396 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGCLF 92
           LFD  P R+   +N ++    ++ +++ A  LF  +RR+ G  +   TLS++L     L 
Sbjct: 228 LFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA 287

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLY---------------MRTNNV-------- 129
             V GR++H   +K GF  +++V  +L+  Y               MR  +V        
Sbjct: 288 SMV-GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMIT 346

Query: 130 --------EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                   +    VFD M   N +S+ ++LSG+ +N    + L  F RM  EG++   FT
Sbjct: 347 AYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFT 406

Query: 182 FSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV-- 236
            + VL   G+L +  I   + Q+H  ++K G      +  AL+ M  +   + DA+ +  
Sbjct: 407 LTGVLNACGLLMEAKI---SKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFS 463

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT-RSTFVSVIKLCATTKE 295
                   SI W SM+ GY  N    EA   F    L GA +  +    +V+ +C T   
Sbjct: 464 QGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAF 523

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             + +Q+H   LK+G   D  +   ++  YSKC  M+DA K+F++M    D+VSW  +I+
Sbjct: 524 HEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVM-PAHDIVSWNGLIA 582

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           GHL +   D A++ + +M + G++P+  T+ +I++A
Sbjct: 583 GHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISA 618


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/765 (34%), Positives = 391/765 (51%), Gaps = 102/765 (13%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M   G KP     + +L +      V  A Q+    I N   +  +    LI+ Y     
Sbjct: 39  MIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEE-IPNPDAIARTT---LITAYCALGN 94

Query: 230 VRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
           +   R +F+G  +  RDS+ +N+M+ GY  N     A E F  M          TF SV+
Sbjct: 95  LELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVL 154

Query: 288 K-LCATTKELRLARQLHSQVLKNGID-FDHNIRTGLMVAYSK--------CGKMEDASKI 337
             L       +   Q+H  V+K G+     ++   L+  Y K        C  M  A K+
Sbjct: 155 SALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKL 214

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE--------------------- 376
           F  M + +D ++WT MI+G+++N  ++ A   F  M                        
Sbjct: 215 FDEMPK-RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEA 273

Query: 377 ----------GVRPNGFTYSIILTAQPAVSPFQV----HAHIIKT----NYEKSFSVGTA 418
                     G++ +  TY+ I++A   V  FQ+    HA+I+K     N+    SV  A
Sbjct: 274 LTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNA 333

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA--------------- 463
           L+  Y K   +DEA K+F  +  ++I+ W+A+L+GY   G  E A               
Sbjct: 334 LITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTL 393

Query: 464 ----------------VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
                           +K+++Q+  +G +P +F F+  + AC+    A+E G+Q HA  +
Sbjct: 394 TVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV-LGALENGRQLHAQLV 452

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
                ++L V +A+++MY+K G +E+A  VF      DLVSWNSMI    QHGH  KA+E
Sbjct: 453 HLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIE 512

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F +M ++ +  D ITF+ V+TAC+HAGLV++G+ YF+ M+  + I P  +HY+ MVDL+
Sbjct: 513 LFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLF 572

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            RAGM   A  +I+ MP    A VW  +LA CR              L  L P +   YV
Sbjct: 573 CRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYV 632

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LLSN+YA  G W + A+VRKLM D+ V+KE   SWIEV+NK + F+  D  HP+   +Y 
Sbjct: 633 LLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYR 692

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
            LE+L   +K  GY PDT +VL D++ E KE  LS HSE+LA+ FG++  P  A +++ K
Sbjct: 693 YLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDATVRVFK 752

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           N+R+CGDCH   K +SK+ RR+I+VRD  RFHHFK G CSC DYW
Sbjct: 753 NIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/533 (24%), Positives = 221/533 (41%), Gaps = 105/533 (19%)

Query: 32  QSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVL---- 85
           + +F+ +P   R+ V YN ++  Y  +     AL LF  +RR        T +SVL    
Sbjct: 99  REIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALV 158

Query: 86  ------KTCGCLFDHVFGRQVHCECVKSGFA----------------------------- 110
                 + CG         Q+HC  VK+G                               
Sbjct: 159 LFVGNEQQCG---------QMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMV 209

Query: 111 -----------RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
                      RD    T+++  Y+R +++   R VF+ M E+   +W +++SGY     
Sbjct: 210 SARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN----GGEVVTS 215
               L L  +M+  GI+ +  T++T++   A+ G      Q+H  ++KN          S
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLS 329

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT------------------ 257
           V NALI++Y K+  V +AR +F  M  R+ ITWN++++GYV                   
Sbjct: 330 VSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKN 389

Query: 258 -------------NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
                        N    E  + F  M L G E     F   +  C+    L   RQLH+
Sbjct: 390 LLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHA 449

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           Q++  G +   ++   ++  Y+KCG +E A  +F  M  + D+VSW +MI+   Q+G   
Sbjct: 450 QLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSV-DLVSWNSMIAALGQHGHGV 508

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------ 418
            A+  F QM +EGV P+  T+  +LTA       +   H   +  E S+ +         
Sbjct: 509 KAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLE-SYGITPCEDHYAR 567

Query: 419 LLNAYVKKGILDEAAKVFELIDEKD-IVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           +++ + + G+   A  V + +  K     W A+LAG    G+ +  ++   QL
Sbjct: 568 MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQL 620


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 261/802 (32%), Positives = 422/802 (52%), Gaps = 24/802 (2%)

Query: 54  CRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDV 113
           C +   +EA+ L   ++ L + +      ++++ C     H  G +V+   + S  +  V
Sbjct: 70  CANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSV 129

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QV 172
            +  + + +++R  N+ D   VF  M+E N+ SW  L+ GYA+    D  + L+HRM  V
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWV 189

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G+KP+ +TF  VL        +A   +VH  V++ G E+   V NALI+MY+K   V+ 
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR +FD M  RD I+WN+M++GY  N +  E  + F  M     +    T  SVI  C  
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             + RL R +H+ V+  G   D ++   L   Y   G   +A K+FS M + KD+VSWT 
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM-DCKDIVSWTT 368

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
           MISG+  N   + A++ +  M ++ V+P+  T + +L+A   +       ++H   IK  
Sbjct: 369 MISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                 V   L+N Y K   +D+A  +F  I  K++++W++++AG         A+  +R
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFR 488

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+    ++PN  T ++ + A  A   A+  GK+ HA  ++  +     + +AL+ MY + 
Sbjct: 489 QMKMT-LQPNAITLTAALAA-CARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC 546

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G +  A   F  Q+K D+ SWN ++ GY++ G     +E+F  M +  +  D ITFI ++
Sbjct: 547 GRMNIAWNQFNSQKK-DVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLL 605

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
             C  + +V +G  YF  M  E+ + P ++HY+C+VDL  RAG L++A   I +MP    
Sbjct: 606 CGCGKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
             VW  +L ACR+                L       Y+LL N+YA  G W+E A+VR++
Sbjct: 665 PAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRM 724

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M +  +  +AG SW+EVK K ++FL+ D  HPQ+ +I + L+    ++ + G    +   
Sbjct: 725 MKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESS 784

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
             D  +  ++ I   HSER AIAFGL+ +  G P+ + KNL +C  CH  +K ISK  RR
Sbjct: 785 SMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRR 844

Query: 815 DIVVRDTNRFHHFKEGLCSCGD 836
           +I VRD+  FHHFK+G CSCGD
Sbjct: 845 EISVRDSEHFHHFKDGECSCGD 866



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 265/526 (50%), Gaps = 10/526 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVLKTCGCLF 92
           +F +  +RN   +N L+  Y +     EA+ L+  +  + G+     T   VL+TCG + 
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   GR+VH   V+ G+  D++V  +L+ +Y++  +V+  R +FD M   +++SW +++S
Sbjct: 211 DLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY  N M    L+LF  M+   + P+  T ++V+      G       +H  VI  G  V
Sbjct: 271 GYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV 330

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             SVCN+L  MYL +   R+A  +F  M+ +D ++W +M++GY  N L  +A +T+  M 
Sbjct: 331 DISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMD 390

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               +    T  +V+  CAT  +L    +LH   +K  +     +   L+  YSKC  ++
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A  IF  +   K+V+SWT++I+G   N     A+ FF QM +  ++PN  T +  L A 
Sbjct: 451 KALDIFHNIPR-KNVISWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAITLTAALAAC 508

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +       ++HAH+++T       +  ALL+ YV+ G ++ A   F    +KD+ +W+
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN-SQKKDVSSWN 567

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            +L GY++ G     V+++ ++    V+P+E TF S++  C   S  V QG  + +   +
Sbjct: 568 ILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGC-GKSQMVRQGLMYFSKMEE 626

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
             +   L   + +V +  + G ++ A +  ++     D   W +++
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 225/488 (46%), Gaps = 46/488 (9%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + LFDR P+R+ + +N ++  Y  + +  E L LF  +R L +     TL+SV+  C
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISAC 307

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L D   GR +H   + +GFA D++V  SL  +Y+   +  +  ++F  M+  ++VSWT
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWT 367

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++SGY  N + ++ ++ +  M  + +KP+  T + VL   A  G + T V++H + IK 
Sbjct: 368 TMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                  V N LI+MY K K +  A  +F  +  ++ I+W S++AG   N    EA   F
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFF 487

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M +   +    T  + +  CA    L   +++H+ VL+ G+  D  +   L+  Y +C
Sbjct: 488 RQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC 546

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G+M  A   F+  +  KDV SW  +++G+ + G   + V  F +M +  VRP+  T+  +
Sbjct: 547 GRMNIAWNQFNSQK--KDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISL 604

Query: 389 LTA------------------QPAVSPF------------------QVHAHIIKTNYEKS 412
           L                    +  V+P                   + H  I K      
Sbjct: 605 LCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664

Query: 413 FSVGTALLNAYVKKGILD----EAAKVFELIDEKDIVAWSAMLAG-YAQIGDTEGAVKIY 467
            +V  ALLNA      +D     A ++FEL  +K  V +  +L   YA  G      K+ 
Sbjct: 665 PAVWGALLNACRIHHNIDLGELSAQRIFEL--DKGSVGYYILLCNLYADCGKWREVAKVR 722

Query: 468 RQLTSEGV 475
           R +   G+
Sbjct: 723 RMMKENGL 730


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/656 (35%), Positives = 374/656 (57%), Gaps = 51/656 (7%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VF+ +++ + + WN+M  G+  +   + A + +  M   G      TF  ++K CA 
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF-------------- 338
            K  +   Q+H  VLK G + D  + T L+  Y +  ++EDA K+F              
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 339 --------------SMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                         +M  E+  KDVVSW AMISG+++ G    A+  F +M +  VRP+ 
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T   +++A           QVH+ I    +  +  +  AL++ Y K G ++ A  +F  
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD+++W+ ++ GY  +   + A+ +++++   G  PN+ T  S+++AC A   A++ 
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHAC-AHLGAIDI 314

Query: 499 GKQFHACSIK--AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           G+  H    K    + NA  + ++L+ MYSK G+IE+A +VF     + L +WN+MI G+
Sbjct: 315 GRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGF 374

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A HG    A ++F  MR+ +++ D ITF+G+++AC+HAG++D G+  F  M + + I P 
Sbjct: 375 AMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPK 434

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LI 662
           +EHY CM+DL   +G+ ++A ++I+ M       +W ++L AC+              L 
Sbjct: 435 LEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLF 494

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            ++P++   YVLLSN+YA  G W E AR+R L+ND+ +KK  G S IE+ +  + F+ GD
Sbjct: 495 KIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGD 554

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
             HP++ +IY  LEE+   L++AG+ PDTS VLQ++++E KE  L  HSE+LAIAFGL++
Sbjct: 555 KFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLIS 614

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T     L IVKNLRVC +CH   KLISK+ +R+I+ RD  RFHHF++G+CSC DYW
Sbjct: 615 TKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 219/485 (45%), Gaps = 42/485 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N +   +        AL L++ +  LGL     T   +LK+C  L 
Sbjct: 18  SVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLK 77

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--------------- 137
               G Q+H   +K G+  D+ V TSL+ +Y++   +ED  +VFD               
Sbjct: 78  ASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVT 137

Query: 138 ----------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                           ++   +VVSW +++SGY         LELF  M    ++P+  T
Sbjct: 138 GYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDEST 197

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             TV+   A  G +    QVH+ +  +G      + NALI  Y K   +  A  +F G+ 
Sbjct: 198 MVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLS 257

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN ++ GY    L+ EA   F  M  +G      T +S++  CA    + + R 
Sbjct: 258 YKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRW 317

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    ++RT L+  YSKCG +E A ++F+ M   K + +W AMI G   
Sbjct: 318 IHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLH-KSLPAWNAMIFGFAM 376

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYEKSFSVG 416
           +G  + A + F +M +  ++P+  T+  +L+A        +  HI ++   NY+ +  + 
Sbjct: 377 HGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLE 436

Query: 417 --TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
               +++     G+  EA ++   +  E D V W ++L      G+ E   K  + L   
Sbjct: 437 HYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFK- 495

Query: 474 GVKPN 478
            ++PN
Sbjct: 496 -IEPN 499



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 159/367 (43%), Gaps = 5/367 (1%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y +  +++FD  P ++ V +N ++  Y     ++EAL LF  + +  +    ST+ +V+ 
Sbjct: 144 YIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVIS 203

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
                     GRQVH      GF  ++ +  +L+D Y +   +E    +F  ++  +V+S
Sbjct: 204 ASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVIS 263

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  L+ GY    +    L LF  M   G  PN  T  ++L   A  G +     +H  + 
Sbjct: 264 WNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYID 323

Query: 207 K--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           K   G    +S+  +LI MY K   +  A  VF+ M  +    WN+M+ G+  +     A
Sbjct: 324 KRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAA 383

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV- 323
           F+ F+ M     +    TFV ++  C+    L L R +   +  N          G M+ 
Sbjct: 384 FDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMID 443

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
                G  ++A ++ S M    D V W +++     +G ++L   F   + +  + PN  
Sbjct: 444 LLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFK--IEPNNP 501

Query: 384 TYSIILT 390
              ++L+
Sbjct: 502 GSYVLLS 508



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 33/239 (13%)

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           L  A  VFE I E +++ W+ M  G+A   D   A+K+Y  + S G+ PN +TF  ++ +
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR---- 544
           C A   A ++G Q H   +K      L V ++L++MY +   +E A +VF R   R    
Sbjct: 73  C-AKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVS 131

Query: 545 ---------------------------DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
                                      D+VSWN+MI GY + G+ K+ALE+FKEM + ++
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
             D  T + VI+A   +G ++ G+Q     + +H     ++  + ++D YS+ G +E A
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHS-WIADHGFGSNLKIVNALIDFYSKCGEMETA 249


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/725 (33%), Positives = 403/725 (55%), Gaps = 23/725 (3%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
           + +++  Y++  ++   R +FD M +  VV+WT L+  YA N   D   +LF +M     
Sbjct: 78  TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCT 137

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE--VVTSVCNALISMYLKSKMVRDA 233
            P+  TF+T+L    D        QVH   +K G +  +  +VCN L+  Y + + +  A
Sbjct: 138 LPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLA 197

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             +F+ + D+DS+T+N+++ GY  + L+ EA   F  M  +G + +  TF  V+K     
Sbjct: 198 CVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGL 257

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
            +  L +QLH   +  G   D ++   ++  YSK  ++ +   +F+ M E+ D VS+  +
Sbjct: 258 HDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPEL-DFVSYNVV 316

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNY 409
           IS + Q    + ++N F +M   G     F ++ +L+    +S  QV    H   I    
Sbjct: 317 ISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATA 376

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +    VG +L++ Y K  + DEA  +F+ + ++  V+W+A+++GY Q G     +K++ +
Sbjct: 377 DSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTK 436

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +    ++ ++ TF++V+ A +A  A++  GKQ HA  I++     +   S LV MY+K G
Sbjct: 437 MRGANLRADQSTFATVLKA-SAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 495

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
           +I+ A +VF+    R+ VSWN++I  YA +G  + A+  F +M +  L+ D ++ +GV+ 
Sbjct: 496 SIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLI 555

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC+H G V++G ++F  M   + I P  +HY+CM+DL  R G   +A  +++ MPF    
Sbjct: 556 ACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE 615

Query: 650 TVWRTVLAACRLISLQP---------------HDSAIYVLLSNMYAATGHWQERARVRKL 694
            +W +VL ACR+   Q                 D+A YV +SN+YAA G W+    V+K 
Sbjct: 616 IMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKA 675

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M +R +KK   YSW+EV +K + F + D +HP  ++I  K+ EL+T ++  GYKPDTS V
Sbjct: 676 MRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSV 735

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           +QDID++ K   L  HSERLA+AF L++TP G P+ ++KNLR C DCH  IKLISK+ +R
Sbjct: 736 VQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKR 795

Query: 815 DIVVR 819
            I  +
Sbjct: 796 VITTQ 800



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 223/426 (52%), Gaps = 11/426 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+    ++ V +N L+  Y +D L+ EA++LFL +R+ G      T S VLK    L D
Sbjct: 200 LFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHD 259

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   V +GF+RD +V   ++  Y + + V + R +F++M E + VS+  ++S 
Sbjct: 260 FALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISS 319

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y++ +  +  L LF  MQ  G    +F F+T+L + A+   +    QVH   I    + +
Sbjct: 320 YSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSI 379

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N+L+ MY K +M  +A  +F  +  R +++W ++++GYV   LH    + F  M  
Sbjct: 380 LHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRG 439

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           A     +STF +V+K  A    L L +QLH+ ++++G   +    +GL+  Y+KCG ++D
Sbjct: 440 ANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 499

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A ++F  M + ++ VSW A+IS +  NG  + A+  F +M + G++P+  +   +L A  
Sbjct: 500 AVQVFEEMPD-RNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACS 558

Query: 392 -----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
                +     FQ  + I     +K       +L+   + G   EA K+  E+  E D +
Sbjct: 559 HCGFVEQGTEFFQAMSPIYGITPKKKHY--ACMLDLLGRNGRFAEAEKLMDEMPFEPDEI 616

Query: 446 AWSAML 451
            WS++L
Sbjct: 617 MWSSVL 622



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 156/590 (26%), Positives = 279/590 (47%), Gaps = 49/590 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLF 92
           LFD  P R  V +  L+  Y  ++   EA  LF  + R   LP +  T +++L  C    
Sbjct: 97  LFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDY-VTFTTLLPGCNDAV 155

Query: 93  DHVFGRQVHCECVKSGFARDV--NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                 QVH   VK GF  ++   V   L+  Y     ++    +F+++ + + V++ +L
Sbjct: 156 PQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTL 215

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++GY ++ +    + LF +M+  G KP+ FTFS VL  +      A   Q+H + +  G 
Sbjct: 216 ITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGF 275

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
               SV N ++  Y K   V + R +F+ M + D +++N +++ Y   E + E+   F  
Sbjct: 276 SRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFRE 335

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G +     F +++ + A    L++ RQ+H Q +    D   ++   L+  Y+KC  
Sbjct: 336 MQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEM 395

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
            ++A  IF  + + +  VSWTA+ISG++Q G     +  F +M    +R +  T++ +L 
Sbjct: 396 FDEAELIFKSLSQ-RSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLK 454

Query: 391 AQPAVSPF----QVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           A    +      Q+HA II++ N E  FS G+ L++ Y K G + +A +VFE + +++ V
Sbjct: 455 ASAGFASLLLGKQLHAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 513

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF--- 502
           +W+A+++ YA  GD E A+  + ++   G++P+  +   V+ AC+     VEQG +F   
Sbjct: 514 SWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSH-CGFVEQGTEFFQA 572

Query: 503 -------------HACSIKAKLNNA------------------LCVSSAL--VTMYSKKG 529
                        +AC +     N                   +  SS L    +Y  + 
Sbjct: 573 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQS 632

Query: 530 NIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
             E A+E +F  ++ RD  ++ SM   YA  G  +    V K MR + ++
Sbjct: 633 LAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIK 682



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 167/337 (49%), Gaps = 6/337 (1%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK D+     +LF+  P+ +FV YN ++  Y +   ++E+LNLF  ++ +G       
Sbjct: 288 FYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFP 347

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +++L     L     GRQVHC+ + +     ++V  SLVD+Y +    ++   +F  ++
Sbjct: 348 FATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLS 407

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           + + VSWT+L+SGY +  ++   L+LF +M+   ++ +  TF+TVL   A    +    Q
Sbjct: 408 QRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQ 467

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  +I++G        + L+ MY K   ++DA  VF+ M DR++++WN++++ Y  N  
Sbjct: 468 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGD 527

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRT 319
              A   F  M  +G +    + + V+  C+    +    +    +    GI        
Sbjct: 528 GEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYA 587

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            ++    + G+  +A K+   M    D + W+++++ 
Sbjct: 588 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 624



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 126/293 (43%), Gaps = 49/293 (16%)

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           QP  +  +V A IIKT +          +   +++G +  A KV++ +  K+ V+ + M+
Sbjct: 23  QPPPATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMI 82

Query: 452 AGYAQIGDT-------------------------------EGAVKIYRQLTSEGVKPNEF 480
           +GY ++GD                                + A K++RQ+      P+  
Sbjct: 83  SGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYV 142

Query: 481 TFSSVINAC--TAPSAAVEQGKQFHACSIKAKL--NNALCVSSALVTMYSKKGNIESASE 536
           TF++++  C    P  AV    Q HA ++K     N  L V + L+  Y +   ++ A  
Sbjct: 143 TFTTLLPGCNDAVPQNAV---GQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACV 199

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F+    +D V++N++I GY + G   +A+ +F +MR+   +    TF GV+ A      
Sbjct: 200 LFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHD 259

Query: 597 VDEGQQYFDIMVN-----EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
              GQQ   + V      +  +   + H+      YS+   + +  ++ N MP
Sbjct: 260 FALGQQLHGLSVTTGFSRDASVGNQILHF------YSKHDRVLETRNLFNEMP 306


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 256/737 (34%), Positives = 403/737 (54%), Gaps = 22/737 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGCLF 92
           LFD    +N V ++ ++  Y   S   EAL LF+  +R          L+SV++ C    
Sbjct: 96  LFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFG 155

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
                 Q+H   VK G+ +DV V TSL+D Y +   ++D R +FD +      +WT++++
Sbjct: 156 GLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIA 215

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY++   +   L+LF +M+   + P+ +  S+VL        +    Q+H  V+++G  +
Sbjct: 216 GYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVM 275

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             S+ N  I  Y K   V+  R +FD M D++ ++W +++AG + N  H +A + F  M 
Sbjct: 276 DVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMA 335

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G         SV+  C +   L   RQ+H+  +K  ID D  ++ GL+  Y+KC  + 
Sbjct: 336 RMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLT 395

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA K+F++M  + D+VS+ AMI G+ +   +  A++ F +M      P    +  +L   
Sbjct: 396 DARKVFNLMAAI-DLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVS 454

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            ++       Q+H  IIK         G+AL++ Y K   + +A  VFE I +KDIV W+
Sbjct: 455 ASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWT 514

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM +GY Q  + E ++K+Y+ L    +KPNEFTF++VI A  +  A++  G+QFH   IK
Sbjct: 515 AMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITA-ASNIASLRHGQQFHNQVIK 573

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
              ++   V++ LV MY+K G+IE A + F     +D   WNSMI  YAQHG  +KAL+V
Sbjct: 574 MGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQV 633

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F++M  + L+ + +TF+GV++AC+H GL+D G  +FD M ++  I P +EHY CMV L  
Sbjct: 634 FEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLG 692

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           RAG L +A + I +MP   +A VWR++L+ACR+              IS  P DS  YVL
Sbjct: 693 RAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVL 752

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN++A+ G W    R+R+ M+   V KE G SWIEV N+ + F+A D +H  S  I   
Sbjct: 753 LSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLV 812

Query: 735 LEELSTRLKDAGYKPDT 751
           L+ L  ++K  GY  +T
Sbjct: 813 LDNLLLQIKGFGYMANT 829



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 287/550 (52%), Gaps = 19/550 (3%)

Query: 98  RQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           +++H + V  GF + D+ +  +L+  Y + N V    ++FD M+  N+V+W+S++S Y  
Sbjct: 58  KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117

Query: 157 NKMNDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           +      L LF + M+    KPN +  ++V+      G +  A+Q+H +V+K G      
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           VC +LI  Y K   + DAR +FDG++ + S TW +++AGY        + + F+ M    
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGH 237

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
               +    SV+  C   K L   +Q+H  VL++GI  D ++  G +  Y KC K++   
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGR 297

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           K+F  M + K+VVSWT +I+G +QN     A++ F +M R G  P+ F  + +L +  ++
Sbjct: 298 KLFDRMVD-KNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSL 356

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                  QVHA+ IK N +    V   L++ Y K   L +A KVF L+   D+V+++AM+
Sbjct: 357 VALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMI 416

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            GY++      A+ ++R++      P    F S++   +A    +E   Q H   IK  +
Sbjct: 417 EGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGV-SASLYHLELSNQIHGLIIKYGV 475

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +      SAL+ +YSK   +  A  VF+  + +D+V W +M  GY Q    +++L+++K 
Sbjct: 476 SLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKC 535

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV-----NEHHIYPTMEHYSCMVDL 626
           ++   L+ +  TF  VITA ++   +  GQQ+ + ++     ++  +  T      +VD+
Sbjct: 536 LQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANT------LVDM 589

Query: 627 YSRAGMLEKA 636
           Y+++G +E+A
Sbjct: 590 YAKSGSIEEA 599



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 225/444 (50%), Gaps = 24/444 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL--PLFGSTLSSVLKTCG 89
           + LFDR   +N V +  ++    ++S H++AL+LF+ + R+G     FG T  SVL +CG
Sbjct: 297 RKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCT--SVLNSCG 354

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     GRQVH   +K     D  V   L+D+Y + +++ D R+VF+ M   ++VS+ +
Sbjct: 355 SLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNA 414

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GY+R       L+LF  M++    P    F ++LGV A    +  + Q+H ++IK G
Sbjct: 415 MIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYG 474

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             +     +ALI +Y K   V DAR VF+ ++D+D + W +M +GY     + E+ + + 
Sbjct: 475 VSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYK 534

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            + ++  +    TF +VI   +    LR  +Q H+QV+K G D D  +   L+  Y+K G
Sbjct: 535 CLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSG 594

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E+A K F +    KD   W +MI+ + Q+G  + A+  F  M  EG++PN  T+  +L
Sbjct: 595 SIEEAHKAF-ISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVL 653

Query: 390 TAQPAVSPFQVHAHIIKTNYE-----KSFSVGTALLNAYVKKGILDEAAKVF---ELIDE 441
           +A         H  ++   ++       F +   + +      +L  A K++   E I++
Sbjct: 654 SACS-------HTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEK 706

Query: 442 KDI----VAWSAMLAGYAQIGDTE 461
             I    V W ++L+     G+ E
Sbjct: 707 MPIKQAAVVWRSLLSACRVSGNVE 730



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 7/143 (4%)

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE-MRRQDL 577
           + L+  YSK   +  A+++F     ++LV+W+SM+  Y  H H  +AL +F + MR  + 
Sbjct: 78  NTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNE 137

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC--MVDLYSRAGMLEK 635
           + +      V+ ACT  G ++   Q   ++V   ++    + Y C  ++D Y++   ++ 
Sbjct: 138 KPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYV---QDVYVCTSLIDFYTKHACIDD 194

Query: 636 AMDIINRMPFAASATVWRTVLAA 658
           A  + + +    S T W T++A 
Sbjct: 195 ARLLFDGLQVKTSFT-WTTIIAG 216


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/713 (34%), Positives = 403/713 (56%), Gaps = 39/713 (5%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT---MVI 206
           L+S     K+N+   E    M   G+  +S+++  +     +   ++    +H    M I
Sbjct: 55  LVSLSKHRKLNE-AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGI 113

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           +N   ++    N ++ MY + + + DA  +FD M + ++++  +M++ Y    +  +A  
Sbjct: 114 ENPSVLLQ---NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M  +G +   S + +++K     + L   RQ+H+ V++ G+  + +I TG++  Y 
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG +  A ++F  M  +K  V+ T ++ G+ Q G    A+  F  +  EGV  + F +S
Sbjct: 231 KCGWLVGAKRVFDQM-AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFS 289

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           ++L A  ++       Q+HA + K   E   SVGT L++ Y+K    + A + F+ I E 
Sbjct: 290 VVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREP 349

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP-NEFTFSSVINACTAPSAAVEQGKQ 501
           + V+WSA+++GY Q+   E AVK ++ L S+     N FT++S+  AC+   A    G Q
Sbjct: 350 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL-ADCNIGGQ 408

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            HA +IK  L  +    SAL+TMYSK G ++ A+EVF+     D+V+W + I G+A +G+
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
             +AL +F++M    ++ + +TFI V+TAC+HAGLV++G+   D M+ ++++ PT++HY 
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPH 667
           CM+D+Y+R+G+L++A+  +  MPF   A  W+  L+ C               L  L P 
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           D+A YVL  N+Y   G W+E A + KLMN+R +KKE   SWI+ K K + F+ GD  HPQ
Sbjct: 589 DTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQ 648

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT--PA 785
           + +IY KL+E    ++   ++ + +        E +E +L  HSERLAIAFGL++    A
Sbjct: 649 TQEIYEKLKEFDGFMEGDMFQCNMT--------ERREQLL-DHSERLAIAFGLISVHGNA 699

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            AP+++ KNLR C DCH   K +S +   +IV+RD+ RFHHFKEG CSC DYW
Sbjct: 700 PAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752



 Score =  233 bits (594), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 282/556 (50%), Gaps = 14/556 (2%)

Query: 61  EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSL 119
           EA      + + G+ +   +   + + C  L     GR +H + ++ G     V +   +
Sbjct: 66  EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQNCV 124

Query: 120 VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
           + +Y    ++ED  ++FD+M+E N VS T+++S YA   + D+ + LF  M   G KP S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
             ++T+L  L +   +    Q+H  VI+ G    TS+   +++MY+K   +  A+ VFD 
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  +  +    ++ GY       +A + F ++   G E     F  V+K CA+ +EL L 
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +Q+H+ V K G++ + ++ T L+  Y KC   E A + F  +RE  D VSW+A+ISG+ Q
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND-VSWSAIISGYCQ 363

Query: 360 NGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
               + AV  F  + ++     N FTY+ I  A   ++      QVHA  IK +   S  
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
             +AL+  Y K G LD+A +VFE +D  DIVAW+A ++G+A  G+   A++++ ++ S G
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS--SALVTMYSKKGNIE 532
           +KPN  TF +V+ AC+  +  VEQGK      ++ K N A  +     ++ +Y++ G ++
Sbjct: 484 MKPNSVTFIAVLTACSH-AGLVEQGKHCLDTMLR-KYNVAPTIDHYDCMIDIYARSGLLD 541

Query: 533 SASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
            A +  K    + D +SW   + G   H + +      +E+R+ D E D   ++      
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE-DTAGYVLPFNLY 600

Query: 592 THAGLVDEGQQYFDIM 607
           T AG  +E  +   +M
Sbjct: 601 TWAGKWEEAAEMMKLM 616



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 162/345 (46%), Gaps = 18/345 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+   +  V    L+  Y +    ++AL LF+ +   G+       S VLK C  L
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G+Q+H    K G   +V+V T LVD Y++ ++ E   R F ++ E N VSW++++
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKP-NSFTFSTVL---GVLADEGIVATAVQVHTMVIK 207
           SGY +    +  ++ F  ++ +     NSFT++++     VLAD  I     QVH   IK
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI---GGQVHADAIK 415

Query: 208 N---GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
               G +   S   ALI+MY K   + DA  VF+ M++ D + W + ++G+       EA
Sbjct: 416 RSLIGSQYGES---ALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN---GIDFDHNIRTGL 321
              F  M   G +    TF++V+  C+    +   +     +L+        DH     +
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH--YDCM 530

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +  Y++ G +++A K    M    D +SW   +SG   +  ++L 
Sbjct: 531 IDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELG 575


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/808 (32%), Positives = 430/808 (53%), Gaps = 56/808 (6%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN-NVEDGRRVFDDMN 140
           +S L+TC  L +    +Q+HC  +K G      +  + V +    + N        D+  
Sbjct: 26  NSSLQTCKTLIEL---KQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGT 82

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELF-HRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           + ++ +  +L+ GYA + +    + ++ H + V GI P++FTF  +L   +     +  V
Sbjct: 83  KCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGV 142

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH +V+K G      V N+LI  Y     V   R VFD M +R+ ++W S++ GY    
Sbjct: 143 QVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVN 202

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           +  EA   F  M   G E    T V  I  CA  K+L L +++ + + + G+  +  +  
Sbjct: 203 MAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVN 262

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KCG M    +IF    + K++V +  ++S ++Q+G     +    +M ++G R
Sbjct: 263 ALLDMYMKCGDMYAVREIFDEFSD-KNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQR 321

Query: 380 PNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+  T    + A   +    V    HA++ +   E+  ++  A+++ Y+K G  + A KV
Sbjct: 322 PDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKV 381

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY---------------------------- 467
           F+ +  K +V W++++AG  + G+ E A++I+                            
Sbjct: 382 FDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAI 441

Query: 468 ---RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
              R++ ++G+K +  T   + +AC     A++  K  +    K  ++  + + +ALV M
Sbjct: 442 DLLREMQNQGIKGDRVTMVGIASAC-GYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDM 500

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           +S+ G+  +A  VF+   KRD+ +W + I   A  G+ K A+E+F EM +QD++ D   F
Sbjct: 501 FSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVF 560

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + ++TA +H G VD+G+Q F  M   H + P + HY CMVDL  RAG+LE+A D++  MP
Sbjct: 561 VALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMP 620

Query: 645 FAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERAR 690
              +  +W + LAACR              +  L P    I+VLLSN+YA+ G W + AR
Sbjct: 621 IKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVAR 680

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           VR  M ++  +K AG S IEV      F +GD SH ++ QI   L+E++ R+   GY PD
Sbjct: 681 VRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQVGYVPD 740

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
           T+ VL D+D++ KE +LS+HSE+LA+A+GL+ T  G P+++VKNLR+C DCH+  KL+SK
Sbjct: 741 TTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRMCSDCHSFAKLVSK 800

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L  R+I VRD NR+H FKEG CSC D+W
Sbjct: 801 LYGREITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 151/568 (26%), Positives = 273/568 (48%), Gaps = 40/568 (7%)

Query: 36  DRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGCLFDH 94
           D   + +    N L+  Y    L +EA+ ++L  I  +G+     T   +L  C  +   
Sbjct: 79  DEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAF 138

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G QVH   VK G  +D+ V+ SL+  Y     V+ GR+VFD+M E NVVSWTSL++GY
Sbjct: 139 SEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGY 198

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           +   M    + LF  M   G++PN  T    +   A    +    +V  ++ + G +  T
Sbjct: 199 SVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNT 258

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V NAL+ MY+K   +   R +FD   D++ + +N++++ YV + L  E     + M   
Sbjct: 259 LVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQK 318

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G    + T +S I  CA   +L + +  H+ V +NG++   NI   ++  Y KCGK E A
Sbjct: 319 GQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAA 378

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR------------------- 375
            K+F  M   K VV+W ++I+G +++G ++LA+  F +M                     
Sbjct: 379 CKVFDSMSN-KTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMF 437

Query: 376 ------------EGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTAL 419
                       +G++ +  T   I +A   +        ++ +I K +      +GTAL
Sbjct: 438 EEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTAL 497

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           ++ + + G    A +VFE ++++D+ AW+A +   A  G+ +GA++++ ++  + VK ++
Sbjct: 498 VDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADD 557

Query: 480 FTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           F F +++ A  +    V+QG+Q F A      ++  +     +V +  + G +E A ++ 
Sbjct: 558 FVFVALLTA-FSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLM 616

Query: 539 KRQR-KRDLVSWNSMICGYAQHGHTKKA 565
           K    K + V W S +    +H + + A
Sbjct: 617 KSMPIKPNDVIWGSFLAACRKHKNVEFA 644



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 218/494 (44%), Gaps = 71/494 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +RN V +  L+  Y   ++ +EA+ LF  +  +G+     T+   +  C  L
Sbjct: 177 RKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKL 236

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G++V     + G   +  V  +L+D+YM+  ++   R +FD+ ++ N+V + +++
Sbjct: 237 KDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIM 296

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y ++ +   VL +   M  +G +P+  T  + +   A  G ++     H  V +NG E
Sbjct: 297 SNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLE 356

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN-ELHM-------- 262
            + ++ NA+I MY+K      A  VFD M ++  +TWNS++AG V + EL +        
Sbjct: 357 RLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEM 416

Query: 263 ----------------------EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
                                 EA +    M   G +  R T V +   C     L LA+
Sbjct: 417 PESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAK 476

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +++ + KN I  D  + T L+  +S+CG   +A ++F  M E +DV +WTA I      
Sbjct: 477 WIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENM-EKRDVSAWTAAIRVKAVE 535

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALL 420
           G    A+  F +M ++ V+ + F +                                ALL
Sbjct: 536 GNAKGAIELFDEMLKQDVKADDFVF-------------------------------VALL 564

Query: 421 NAYVKKGILDEAAKVFELIDE-----KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
            A+   G +D+  ++F  +++       IV +  M+    + G  E A  + + +    +
Sbjct: 565 TAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMP---I 621

Query: 476 KPNEFTFSSVINAC 489
           KPN+  + S + AC
Sbjct: 622 KPNDVIWGSFLAAC 635


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/681 (34%), Positives = 389/681 (57%), Gaps = 23/681 (3%)

Query: 97  GRQVHCECVKSGFA--RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            + VH   +KS F+    + +   +   Y + ++++   R+FD M++ N  SWT L++G 
Sbjct: 87  AKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGL 146

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A N +     E F  MQ +GI P+ F +S +L +      +     VH  ++  G    T
Sbjct: 147 AENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHT 206

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  AL++MY K + + D+  VF+ M + + ++WN+M+ G+ +N+L+++AF+ F  M   
Sbjct: 207 FVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGE 266

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G      TF+ V K     +++  A+++    L+ G+D +  + T L+   SKCG +++A
Sbjct: 267 GVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEA 326

Query: 335 SKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
             IF S     +    W AMISG+L++G  + A+  F +M +  +  + +TY  +  A  
Sbjct: 327 RSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIA 386

Query: 394 AVSPF----QVHAHIIKTNYEKSF-SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
           A+       +VHA  IK+  E ++ S+  A+ NAY K G L++  KVF  ++++D+++W+
Sbjct: 387 ALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWT 446

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +++  Y+Q  + + A++I+  + +EG+ PN+FTFSSV+ +C A    +E G+Q H    K
Sbjct: 447 SLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSC-ANLCLLEYGQQVHGIICK 505

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L+   C+ SALV MY+K G +  A +VF R    D VSW ++I G+AQHG    AL++
Sbjct: 506 VGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQL 565

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M +  +E + +TF+ V+ AC+H GLV+EG QYF +M   + + P MEHY+C+VDL S
Sbjct: 566 FRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLS 625

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           R G L  AM+ I+RMP   +  VW+T+L ACR              ++S +  +SA YVL
Sbjct: 626 RVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVL 685

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN Y  +G +++   +R LM ++ VKKE G SWI V    + F AGD  HP+ ++IY+K
Sbjct: 686 LSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAK 745

Query: 735 LEELSTRLKDAGYKPDTSYVL 755
           LEEL  +L      PD SY L
Sbjct: 746 LEELKLKLISLDDVPDLSYEL 766



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 287/546 (52%), Gaps = 25/546 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+  QRN   +  L+     + L  +    F  ++  G+       S +L+ C  L  
Sbjct: 127 LFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDS 186

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  VH + V  GF     VST+L+++Y +   +ED  +VF+ M E NVVSW ++++G
Sbjct: 187 IELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITG 246

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTV---LGVLADEGIVATAVQVHTMVIKNGG 210
           +  N +     +LF RM  EG+ P++ TF  V   +G+L D   V  A +V    ++ G 
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRD---VNKAKEVSGYALELGV 303

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETF 268
           +  T V  ALI M  K   +++AR++F+   +  R +  WN+M++GY+ +  + +A E F
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELF 363

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSK 327
             M      L   T+ SV    A  K L L +++H++ +K+G++ ++ +I   +  AY+K
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +ED  K+F+ M + +D++SWT++++ + Q    D A+  F  M  EG+ PN FT+S 
Sbjct: 424 CGSLEDVRKVFNRMED-RDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSS 482

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L +   +       QVH  I K   +    + +AL++ Y K G L +A KVF  I   D
Sbjct: 483 VLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNAD 542

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            V+W+A++AG+AQ G  + A++++R++   GV+PN  TF  V+ AC+     VE+G Q+ 
Sbjct: 543 TVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACS-HGGLVEEGLQYF 601

Query: 504 ACSIKA-----KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYA 557
               K      ++ +  C+    V + S+ G++  A E   R   + + + W +++    
Sbjct: 602 KLMKKTYGLVPEMEHYACI----VDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACR 657

Query: 558 QHGHTK 563
            HG+ +
Sbjct: 658 VHGNVE 663



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 104/183 (56%), Gaps = 4/183 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           + +F+R   R+ + +  L+  Y + S   +A+ +F  +R  G+     T SSVL +C   
Sbjct: 431 RKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANL 490

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           CL +  +G+QVH    K G   D  + ++LVD+Y +   + D ++VF+ ++ ++ VSWT+
Sbjct: 491 CLLE--YGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTA 548

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G+A++ + D  L+LF RM   G++PN+ TF  VL   +  G+V   +Q   ++ K  
Sbjct: 549 IIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTY 608

Query: 210 GEV 212
           G V
Sbjct: 609 GLV 611


>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
 gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
          Length = 679

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/661 (36%), Positives = 377/661 (57%), Gaps = 24/661 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           ++H  ++  G      + N LI MY K   + +ARAVF+ +E  +  +W+ ++   V N 
Sbjct: 21  RIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKIESPNIFSWSIIIGACVDNG 80

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L   A E ++ M   G  L     ++ +  C++   L   R L +++   G      +  
Sbjct: 81  LARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGRALEARITSMGFHLHPVVWN 140

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y K G +++A K F  M   + VVSWTAMISG   +G  DLA++FF +M  EGVR
Sbjct: 141 SLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALHGCEDLALDFFRKMVAEGVR 200

Query: 380 PNGFTYSIILTAQPA------VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           PN  T+  IL  +         +  ++H  I+    + S  V  +LLN Y K G LDEA 
Sbjct: 201 PNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI-VRNSLLNMYGKCGGLDEAR 259

Query: 434 KVFELI-DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
           +VFE   D ++++ WS M+A Y+  GD   A+ +Y+++  EG++P+E+TF+S+++AC+  
Sbjct: 260 RVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSLLDACSIA 319

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
              + +G+  H       L   + +++AL+ MY + G +E A  VF++    +LV+W ++
Sbjct: 320 GDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLEDALRVFEKMNHWNLVAWTAL 379

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I  +AQHG+   A+++   M  + ++ D I F+ V+ AC+HA +++ G   F  MV +  
Sbjct: 380 IAAFAQHGNVH-AIDLSWRMHLEGVQADNIVFLSVLHACSHAVVLEAGLSCFQEMVADFG 438

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLIS--------- 663
           +     HYSCMVDL +R G + +A ++++ MPF  +    +T+LAACR+           
Sbjct: 439 VRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAACRVSGDTPRGARVA 498

Query: 664 -----LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
                L PHD+A YVL+S+ YAA   W E A V++ M    VKK  G+S +EVKN+ + F
Sbjct: 499 RLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAKLGVKKPRGWSCVEVKNRVHQF 558

Query: 719 LAGDIS-HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIA 777
            AG+ S H ++ +I  +L  L   +K+ GY PDT  +   ++++ KE +L+ HSER+AIA
Sbjct: 559 FAGNFSWHSEAAEIEVELRRLQAVVKEGGYIPDTGQIGHRLEEDGKEDLLALHSERVAIA 618

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           FGL+  PAG P+ +VKNLRVC DCH V K+IS+   R IVVRD  RFH F+ G CSCGDY
Sbjct: 619 FGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRIVVRDAYRFHRFENGTCSCGDY 678

Query: 838 W 838
           W
Sbjct: 679 W 679



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 206/385 (53%), Gaps = 12/385 (3%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
            F S+++ C  ++ L   R++H++++  G+  D  +   L+  Y KCG ME+A  +F  +
Sbjct: 2   AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-- 399
            E  ++ SW+ +I   + NG    A+  +  M  EGVR +       ++A  ++      
Sbjct: 62  -ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHG 120

Query: 400 --VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKDIVAWSAMLAGYAQ 456
             + A I    +     V  +LLN Y K G +D A K F+ +  ++ +V+W+AM++G+A 
Sbjct: 121 RALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFAL 180

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSV--INACTAPSAAVEQGKQFHACSIKAKLNNA 514
            G  + A+  +R++ +EGV+PNE TF S+  + AC+  +  +  GK+ H   + A L+++
Sbjct: 181 HGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLN-LLAAGKKLHELILDAGLDSS 239

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRK-RDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
           + V ++L+ MY K G ++ A  VF+R    R+L++W++MI  Y+ +G  ++AL ++K+M 
Sbjct: 240 I-VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMD 298

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
            + LE D  TF  ++ AC+ AG      +     +    +   M   + ++++Y R G L
Sbjct: 299 LEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQL 358

Query: 634 EKAMDIINRMPFAASATVWRTVLAA 658
           E A+ +  +M    +   W  ++AA
Sbjct: 359 EDALRVFEKMNH-WNLVAWTALIAA 382



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 195/368 (52%), Gaps = 8/368 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ +++F++    N   ++ ++     + L + AL L+  +   G+ L    L + +  C
Sbjct: 52  EEARAVFEKIESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSAC 111

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVSW 147
             L     GR +       GF     V  SL+++Y +  ++++ R+ F DM  + +VVSW
Sbjct: 112 SSLGSLDHGRALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSW 171

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA--DEGIVATAVQVHTMV 205
           T+++SG+A +   D  L+ F +M  EG++PN  TF ++L + A  +  ++A   ++H ++
Sbjct: 172 TAMISGFALHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELI 231

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVTNELHMEA 264
           +  G +  + V N+L++MY K   + +AR VF+   D R+ ITW++M+A Y  N    +A
Sbjct: 232 LDAGLD-SSIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQA 290

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGLMV 323
              +  M L G E    TF S++  C+   + L   R LH ++   G++    + T L+ 
Sbjct: 291 LSLYKKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALIN 350

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y + G++EDA ++F  M    ++V+WTA+I+   Q+G +  A++   +M  EGV+ +  
Sbjct: 351 MYGRYGQLEDALRVFEKMNHW-NLVAWTALIAAFAQHGNVH-AIDLSWRMHLEGVQADNI 408

Query: 384 TYSIILTA 391
            +  +L A
Sbjct: 409 VFLSVLHA 416


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/712 (35%), Positives = 374/712 (52%), Gaps = 92/712 (12%)

Query: 218 NALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVAGYVTNELHMEAFETFNNM-GLA 274
            +L++ +  +  +RDA A FD +    RD++  N+M++ +    L   A   F+ + G  
Sbjct: 98  TSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 157

Query: 275 GAELTRSTFVSVIKLCATTKELRLAR--QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                  +F ++I        L      QLH  VLK+G     ++   L+  Y KC   E
Sbjct: 158 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 217

Query: 333 ---DASKIFSMMREMKDV------------------------------VSWTAMISGHLQ 359
              DA K+   M +  D+                              V W AMISG++Q
Sbjct: 218 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 277

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK--TNY--EK 411
           +G    A   F +M  E V  + FT++ +L+A      F     VH  II+   N+  E 
Sbjct: 278 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 337

Query: 412 SFSVGTAL-------------------------------LNAYVKKGILDEAAKVFELID 440
           +  V  AL                               L+ Y+  G LD+A +VF+++ 
Sbjct: 338 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 397

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            K+ ++W  M++GY   G +E A+K++ Q+ +E VKP ++T++  I AC     A++ G+
Sbjct: 398 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC-GELGALKHGR 456

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q HA  ++     +    +AL+TMY+K G +  A  VF      D VSWN+MI    QHG
Sbjct: 457 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 516

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
           H ++ALE+F +M  + ++ D I+F+ ++TAC HAGLVDEG  YF+ M  +  I P  +HY
Sbjct: 517 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 576

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQP 666
           + ++DL  R+G + +A D+I  MPF  + ++W  +L+ CR              L  + P
Sbjct: 577 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 636

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
                Y+LLSN Y+A G W + ARVRKLM DR VKKE G SWIEV +K + FL GD  HP
Sbjct: 637 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 696

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           ++ ++Y  LE +  R++  GY PDT +VL D++   KE IL  HSE+LA+ FGL+  P G
Sbjct: 697 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPG 756

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           A + ++KNLR+CGDCHT +  +SK   R+IVVRD  RFHHFK+G CSCG+YW
Sbjct: 757 ATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 228/527 (43%), Gaps = 99/527 (18%)

Query: 33  SLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLF-----LGIRRLGLPLFGSTLSSVL 85
           + FD  P  +R+ V +N ++  + R SL   A+++F      G  R     F + +S+V 
Sbjct: 115 AFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVG 174

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE---DGRRVFDDMNES 142
           +       H    Q+HC  +KSG A  ++VS +L+ LYM+ +  E   D R+V D+M + 
Sbjct: 175 QMHNLAAPHC--TQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDK 232

Query: 143 NVVSWTS-------------------------------LLSGYARNKMNDRVLELFHRMQ 171
           + ++WT+                               ++SGY ++ M     ELF RM 
Sbjct: 233 DDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMV 292

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG----GEVVTSVCNALISMYLKS 227
            E +  + FTF++VL   A+ G       VH  +I+       E    V NAL+++Y K 
Sbjct: 293 SEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKG 352

Query: 228 KMVRDARAVFDGMEDRDSITWNS-------------------------------MVAGYV 256
             +  A+ +FD M  +D ++WN+                               MV+GYV
Sbjct: 353 GKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYV 412

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
              L  +A + FN M     +    T+   I  C     L+  RQLH+ +++ G +  ++
Sbjct: 413 HGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNS 472

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
               L+  Y+KCG + DA  +F +M  + D VSW AMIS   Q+G    A+  F QM  E
Sbjct: 473 AGNALLTMYAKCGAVNDARLVFLVMPNL-DSVSWNAMISALGQHGHGREALELFDQMVAE 531

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY------EKSFSVGTA------LLNAYV 424
           G+ P+  ++  ILTA         HA ++   +      ++ F +         L++   
Sbjct: 532 GIDPDRISFLTILTACN-------HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLG 584

Query: 425 KKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           + G + EA  + + +  E     W A+L+G    GD E       QL
Sbjct: 585 RSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQL 631



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 173/391 (44%), Gaps = 58/391 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F+    +  V +N ++  Y +  +  +A  LF  +    +PL   T +SVL  C   
Sbjct: 254 RSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA 313

Query: 92  FDHVFGRQVHCECVK--SGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              V G+ VH + ++    F  +  + V+ +LV LY +   +   +R+FD MN  +VVSW
Sbjct: 314 GFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSW 373

Query: 148 TSLLSGYARNKMNDRVLE-------------------------------LFHRMQVEGIK 176
            ++LSGY  +   D+ +E                               LF++M+ E +K
Sbjct: 374 NTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVK 433

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P  +T++  +    + G +    Q+H  +++ G E   S  NAL++MY K   V DAR V
Sbjct: 434 PCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLV 493

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           F  M + DS++WN+M++    +    EA E F+ M   G +  R +F++++  C      
Sbjct: 494 FLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN----- 548

Query: 297 RLARQLHSQVLKNGIDF------DHNIRTG------LMVAYSKCGKMEDASKIFSMMREM 344
                 H+ ++  G  +      D  I  G      L+    + G++ +A  +   M   
Sbjct: 549 ------HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE 602

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
                W A++SG   NG ++       Q+ R
Sbjct: 603 PTPSIWEAILSGCRTNGDMEFGAYAADQLFR 633



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 4/232 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K   +F   P +N + +  ++  Y    L ++AL LF  +R   +     T +  +  CG
Sbjct: 388 KAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACG 447

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     GRQ+H   V+ GF    +   +L+ +Y +   V D R VF  M   + VSW +
Sbjct: 448 ELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNA 507

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++S   ++      LELF +M  EGI P+  +F T+L      G+V         + ++ 
Sbjct: 508 MISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF 567

Query: 210 GEVVTSVCNA-LISMYLKSKMVRDARAVFDGM--EDRDSITWNSMVAGYVTN 258
           G        A LI +  +S  + +AR +   M  E   SI W ++++G  TN
Sbjct: 568 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI-WEAILSGCRTN 618


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/625 (39%), Positives = 362/625 (57%), Gaps = 35/625 (5%)

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D  +WNS++A    +    EA   F++M       TRS+F   IK C++  ++   +Q H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
            Q    G   D  + + L+V YS CGK+EDA K+F  + + +D+VSWT+MI G+  NG  
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RDIVSWTSMIRGYDLNGNA 158

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------------VHAHIIKTNYE 410
             AV+ F  +    V  N    ++ L +   VS                +H+ +IK  ++
Sbjct: 159 LDAVSLFKDLL---VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215

Query: 411 KSFSVGTALLNAYVK--KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +  SVG  LL+AY K  +G +  A K+F+ I +KD V+++++++ YAQ G +  A +++R
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 469 QLTSEGVKP-NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           +L    V   N  T S+V+ A  + S A+  GK  H   I+  L + + V ++++ MY K
Sbjct: 276 RLVKNKVVTFNAITLSTVLLA-VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +E+A + F R + +++ SW +MI GY  HGH  KALE+F  M    +  + ITF+ V
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+HAGL  EG ++F+ M     + P +EHY CMVDL  RAG L+KA D+I RM    
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
            + +W ++LAACR              L  L   +   Y+LLS++YA  G W++  RVR 
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
           +M +R + K  G+S +E+  + + FL GD  HPQ  +IY  L EL+ +L +AGY  +TS 
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
           V  D+D+E KE  L  HSE+LAIAFG++ T  G+ + +VKNLRVC DCH VIKLISK+  
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVD 634

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+ VVRD  RFHHFK+G CSCGDYW
Sbjct: 635 REFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 219/438 (50%), Gaps = 19/438 (4%)

Query: 33  SLFDRSPQRNFV-EYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +LF+R   +  V  +N ++ +  R     EAL  F  +R+L L    S+    +K C  L
Sbjct: 30  TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           FD   G+Q H +    G+  D+ VS++L+ +Y     +ED R+VFD++ + ++VSWTS++
Sbjct: 90  FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMI 149

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL----ADEGIVATAV--QVHTMV 205
            GY  N      + LF  + V+    +   F   +G++    A   + A  +   +H+ V
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 206 IKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
           IK G +   SV N L+  Y K     V  AR +FD + D+D +++NS+++ Y  + +  E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCAT-TKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           AFE F  +         +  +S + L  + +  LR+ + +H QV++ G++ D  + T ++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KCG++E A K F  M+  K+V SWTAMI+G+  +G    A+  F  M   GVRPN 
Sbjct: 330 DMYCKCGRVETARKAFDRMKN-KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL------LNAYVKKGILDEAAKVF 436
            T+  +L A  + +   V         +  F V   L      ++   + G L +A  + 
Sbjct: 389 ITFVSVLAA-CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447

Query: 437 ELIDEK-DIVAWSAMLAG 453
           + +  K D + WS++LA 
Sbjct: 448 QRMKMKPDSIIWSSLLAA 465



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 169/348 (48%), Gaps = 16/348 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI------RRLGLPLFGSTLSSVL 85
           + +FD  P+R+ V +  ++  Y  +    +A++LF  +          + L    L SV+
Sbjct: 131 RKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR--TNNVEDGRRVFDDMNESN 143
             C  +        +H   +K GF R V+V  +L+D Y +     V   R++FD + + +
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
            VS+ S++S YA++ M++   E+F R+ + + +  N+ T STVL  ++  G +     +H
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             VI+ G E    V  ++I MY K   V  AR  FD M++++  +W +M+AGY  +    
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTK-ELRLARQLHSQVLKNGID--FDHNIRT 319
           +A E F  M  +G      TFVSV+  C+     +   R  ++   + G++   +H    
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH---Y 427

Query: 320 GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           G MV    + G ++ A  +   M+   D + W+++++    +  ++LA
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/635 (37%), Positives = 368/635 (57%), Gaps = 58/635 (9%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N +I+ +++S  +  A  VF+ M  + ++TWNSM+AGY             N  G     
Sbjct: 9   NRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYS------------NRRG----- 51

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                            ++++ARQL  ++ +  I F +NI   ++  Y     +E A   
Sbjct: 52  -----------------KIKVARQLFDRIPEPDI-FSYNI---MLACYLHNADVESARLF 90

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M  +KD  SW  MISG  QNG +D A   F  M    VR N  +++ +++       
Sbjct: 91  FDQM-PVKDTASWNTMISGFSQNGMMDQARELFLVMP---VR-NSVSWNAMISGYVESGD 145

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
             +   + +    +S    TA++  ++K G ++ A K FE +  K++V W+AM+AGY + 
Sbjct: 146 LDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIEN 205

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
              E  +K+++++   G +PN  + SSV+  C+  SA ++ GKQ H    K+ ++  +  
Sbjct: 206 CQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSA-LKLGKQVHQLICKSPVSWNITA 264

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            ++L++MY K G++E A ++F    ++D+V+WN+MI GYAQHG  +KAL +F +MR + +
Sbjct: 265 GTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGM 324

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D ITF+ V++AC HAG VD G +YF+ MV ++ +    +HY+C+VDL  R G L +A+
Sbjct: 325 KPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAV 384

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
           D+I +MPF   + ++ T+L ACR              L++L P  +A YV L+N+YAA  
Sbjct: 385 DLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMN 444

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W   A VR+ M D KV K  GYSWIEVK+  + F +GD  HP+   I+ KL EL  +++
Sbjct: 445 RWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMR 504

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
            AGY PD  Y L D+ +E K+ IL +HSE+LAIA+GL+  P G P+++ KNLRVCGDCH+
Sbjct: 505 LAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHS 564

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             K IS +E R I+VRDT RFHHF++G CSCGDYW
Sbjct: 565 ATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 219/439 (49%), Gaps = 63/439 (14%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL-ELFHRM 170
           +V  S  ++  ++R+ ++    RVF+ M     V+W S+L+GY+  +   +V  +LF R+
Sbjct: 4   NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
                +P+ F++                                   N +++ YL +  V
Sbjct: 64  P----EPDIFSY-----------------------------------NIMLACYLHNADV 84

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             AR  FD M  +D+ +WN+M++G+  N +  +A E F  M +  +     ++ ++I   
Sbjct: 85  ESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNS----VSWNAMISGY 140

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
             + +L LA+QL        +       T ++  + K GK+E A K F  M  MK++V+W
Sbjct: 141 VESGDLDLAKQLFEVAPVRSV----VAWTAMITGFMKFGKIELAEKYFEEM-PMKNLVTW 195

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
            AMI+G+++N   +  +  F +M   G RPN  + S +L     +S      QVH  I K
Sbjct: 196 NAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICK 255

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           +    + + GT+LL+ Y K G L++A K+F ++ +KD+V W+AM++GYAQ G  E A+ +
Sbjct: 256 SPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYL 315

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSAL 521
           + ++  EG+KP+  TF +V++AC   +  V+ G ++         ++AK ++  CV    
Sbjct: 316 FDKMRDEGMKPDWITFVAVLSACNH-AGFVDLGIEYFNSMVRDYGVEAKPDHYTCV---- 370

Query: 522 VTMYSKKGNIESASEVFKR 540
           V +  + G +  A ++ K+
Sbjct: 371 VDLLGRGGKLVEAVDLIKK 389



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 148/309 (47%), Gaps = 9/309 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            FD+ P ++   +N ++  + ++ +  +A  LFL +       + + +S  +++     D
Sbjct: 90  FFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSWNAMISGYVESG----D 145

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
               +Q+     +    R V   T+++  +M+   +E   + F++M   N+V+W ++++G
Sbjct: 146 LDLAKQL----FEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAG 201

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N   +  L+LF RM   G +PN  + S+VL   ++   +    QVH ++ K+     
Sbjct: 202 YIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWN 261

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +   +L+SMY K   + DA  +F  M  +D +TWN+M++GY  +    +A   F+ M  
Sbjct: 262 ITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRD 321

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            G +    TFV+V+  C     + L  +  +S V   G++   +  T ++    + GK+ 
Sbjct: 322 EGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLV 381

Query: 333 DASKIFSMM 341
           +A  +   M
Sbjct: 382 EAVDLIKKM 390



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 95/179 (53%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +  F+  P +N V +N ++  Y  +   +  L LF  +   G     S+LSSVL  C  L
Sbjct: 181 EKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNL 240

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+QVH    KS  + ++   TSL+ +Y +  ++ED  ++F  M + +VV+W +++
Sbjct: 241 SALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMI 300

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           SGYA++   ++ L LF +M+ EG+KP+  TF  VL      G V   ++    ++++ G
Sbjct: 301 SGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYG 359



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 17/145 (11%)

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA-QHGHTKKALEVFKEMRRQD 576
           S+ ++T + + G++ SA  VF+    +  V+WNSM+ GY+ + G  K A ++F  +   D
Sbjct: 8   SNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPD 67

Query: 577 LEFDGITFIGVITAC-THAGLVDEGQQYFDIMVNEHHIYPTME--HYSCMVDLYSRAGML 633
                I    ++ AC  H   V+  + +FD M       P  +   ++ M+  +S+ GM+
Sbjct: 68  -----IFSYNIMLACYLHNADVESARLFFDQM-------PVKDTASWNTMISGFSQNGMM 115

Query: 634 EKAMDIINRMPFAASATVWRTVLAA 658
           ++A ++   MP   S + W  +++ 
Sbjct: 116 DQARELFLVMPVRNSVS-WNAMISG 139


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/742 (33%), Positives = 415/742 (55%), Gaps = 38/742 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYC-RDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           + D +LFD+SP  N   +NR+L  Y  RD   Q +L  F    R GL       + VL  
Sbjct: 24  QHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQ-SLRFFKNNFRWGLDGNADEFTLVLAL 82

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             C      GRQ+H   + SGF   + VS SL+++Y ++  +E    VF ++++ ++VSW
Sbjct: 83  KACCGFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSW 142

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            ++LSG+ ++   +  L    RM + G+K +S T++T L    D        Q+HT+ +K
Sbjct: 143 NTILSGFEKS---ENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALK 199

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT-NELHMEAFE 266
            G +    V NAL++MY + + + DAR VFD M  RD ++W++M+ GY    +  ++A  
Sbjct: 200 CGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAIL 259

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M   G +         + +C   + L L +Q+H   +K G +   ++   L+  YS
Sbjct: 260 VFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYS 319

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC  +EDA  +F ++ + ++V+SWT MIS + + GA+ L    F +M  +GV PN  T+ 
Sbjct: 320 KCEIIEDAKAVFELIND-RNVISWTTMISLY-EEGAVSL----FNKMRLDGVYPNDVTFI 373

Query: 387 IILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L A            VH   IK ++    +VG +L+  Y K   + +A++VF  +  +
Sbjct: 374 GLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYR 433

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA-PSAAVEQGKQ 501
           +I++W+A+++GYAQ    + A++ +     E  KPNE+TF SV+NA +A    +++ G++
Sbjct: 434 EIISWNALISGYAQNALCQEALEAFLYAIME-YKPNEYTFGSVLNAISAGEDISLKHGQR 492

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H+  IK  LN    +S AL+ MY+K+G+I+ +  VF    K+   +W ++I GYAQHG 
Sbjct: 493 CHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGD 552

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
            +  +++F+EM ++ ++ D + F+ V+TAC+   +VD G+Q+F++M+ +H I P  EHYS
Sbjct: 553 YESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYS 612

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPH 667
           CMVD+  RAG LE+A +I+ R+P     +  +++L ACR              L+  +P 
Sbjct: 613 CMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPL 672

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKN------KTYSFLAG 721
           +S  YVL+SN+YA  G W++ A+VRK M +R V KE G+SW++V N        + F +G
Sbjct: 673 ESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWVDVGNFGASNLYLHGFSSG 732

Query: 722 DISHPQSNQIYSKLEELSTRLK 743
           D+SHPQS +I+   + +   +K
Sbjct: 733 DVSHPQSEEIFRMAKYMGAEMK 754


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/709 (34%), Positives = 393/709 (55%), Gaps = 57/709 (8%)

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM--YLKSKMVRDARAVFDGMEDR 243
           L +LA    + +  Q+H+++IK+G        + LI       S+ +  A ++F  +  +
Sbjct: 29  LNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88

Query: 244 DS--ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
                 WN+++  +        +   F+ M  +G      TF S+ K CA +K    A+Q
Sbjct: 89  PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF--SMMREM--------------- 344
           LH+  LK  +    ++ T L+  YS+ G++  A  +F  S +R+                
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208

Query: 345 -------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
                        KDVVSW AMI+G++Q+G  + A+  F +M    V PN  T   +L+A
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +   +    + + +    + K+  +  AL++ Y K G +  A K+F+ +++KD++ W
Sbjct: 269 CGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILW 328

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-- 505
           + M+ GY  +   E A+ ++  +  E V PN+ TF +V+ AC A   A++ GK  HA   
Sbjct: 329 NTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPAC-ASLGALDLGKWVHAYID 387

Query: 506 -SIKAKLN-NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
            ++K   N N + + ++++ MY+K G +E A +VF+    R L SWN+MI G A +GH +
Sbjct: 388 KNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAE 447

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +AL +F+EM  +  + D ITF+GV++ACT AG V+ G +YF  M  ++ I P ++HY CM
Sbjct: 448 RALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCM 507

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
           +DL +R+G  ++A  ++  M       +W ++L ACR              L  L+P +S
Sbjct: 508 IDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENS 567

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             YVLLSN+YA  G W + A++R  +ND+ +KK  G + IE+    + FL GD  HPQS 
Sbjct: 568 GAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSE 627

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            I+  L+E+   L++ G+ PDTS VL D+D+E KE  L+QHSE+LAIAFGL++T  G+ +
Sbjct: 628 NIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTI 687

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +IVKNLRVC +CH+  KLISK+  R+I+ RD NRFHHFK+G CSC D W
Sbjct: 688 RIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 235/515 (45%), Gaps = 55/515 (10%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDL--YMRTNNVEDGRRVFDDMNE--SNVVSWTSLLSG 153
           +Q+H   +KSG    +   + L++      + ++     +F  ++    N+  W +L+  
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG---- 209
           ++        L LF +M   G+ PNS TF ++    A       A Q+H   +K      
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161

Query: 210 GEVVTSVCN---------------------------ALISMYLKSKMVRDARAVFDGMED 242
             V TS+ +                           ALI+ Y+    V DAR +FD +  
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           +D ++WN+M+AGYV +    EA   F  M  A     +ST VSV+  C   + L L + +
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
            S V   G   +  +   L+  YSKCG++  A K+F  M E KDV+ W  MI G+     
Sbjct: 282 GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGM-EDKDVILWNTMIGGYCHLSL 340

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK----TNYEKSFS 414
            + A+  F  M RE V PN  T+  +L A  ++        VHA+I K    T    + S
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           + T+++  Y K G ++ A +VF  +  + + +W+AM++G A  G  E A+ ++ ++ +EG
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEG 460

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKG 529
            +P++ TF  V++ACT  +  VE G ++ +       I  KL +  C    ++ + ++ G
Sbjct: 461 FQPDDITFVGVLSACTQ-AGFVELGHRYFSSMNKDYGISPKLQHYGC----MIDLLARSG 515

Query: 530 NIESASEVF-KRQRKRDLVSWNSMICGYAQHGHTK 563
             + A  +    + + D   W S++     HG  +
Sbjct: 516 KFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE 550



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 150/338 (44%), Gaps = 5/338 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P ++ V +N ++  Y +    +EAL  F  ++   +    ST+ SVL  CG L  
Sbjct: 215 LFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRS 274

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ +       GF +++ +  +LVD+Y +   +   R++FD M + +V+ W +++ G
Sbjct: 275 LELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGG 334

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN----G 209
           Y    + +  L LF  M  E + PN  TF  VL   A  G +     VH  + KN    G
Sbjct: 335 YCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTG 394

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                S+  ++I MY K   V  A  VF  M  R   +WN+M++G   N     A   F 
Sbjct: 395 NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFE 454

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKC 328
            M   G +    TFV V+  C     + L  +  S + K+ GI         ++   ++ 
Sbjct: 455 EMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARS 514

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           GK ++A  +   M    D   W ++++    +G ++  
Sbjct: 515 GKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFG 552



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 6/227 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD    ++ + +N ++  YC  SL++EAL LF  + R  +     T  +VL  C  L
Sbjct: 314 RKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASL 373

Query: 92  FDHVFGRQVHCECVK----SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
                G+ VH    K    +G   +V++ TS++ +Y +   VE   +VF  M   ++ SW
Sbjct: 374 GALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASW 433

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            +++SG A N   +R L LF  M  EG +P+  TF  VL      G V    +  + + K
Sbjct: 434 NAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNK 493

Query: 208 NGG-EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMV 252
           + G          +I +  +S    +A+ +   ME + D   W S++
Sbjct: 494 DYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLL 540


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/656 (35%), Positives = 379/656 (57%), Gaps = 51/656 (7%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VF+ +++ + + WN+M+ G+  +   + +   +  M   G      TF  ++K CA 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF--SMMREM------ 344
           +K     +Q+H QVLK G D D  + T L+  Y +  ++EDA K+F  S  R++      
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 345 ----------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                                 KDVVSW AMISG+ + G    A+  F +M +  VRP+ 
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            TY  +L+A           QVH+ +    ++ +  +  AL++ Y K G ++ A  +F+ 
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD+++W+ ++ GY  +   + A+ +++++   G  PN+ T  SV+ AC A   A++ 
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPAC-AHLGAIDI 315

Query: 499 GKQFHACSIK--AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           G+  H    K    + NA  + ++L+ MY+K G+IE+A +VF     + L SWN+MI G+
Sbjct: 316 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 375

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A HG    + ++F  MR+  +E D ITF+G+++AC+H+G++D G+  F  M  ++ + P 
Sbjct: 376 AMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPK 435

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LI 662
           +EHY CM+DL   +G+ ++A ++IN M       +W ++L AC+              LI
Sbjct: 436 LEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLI 495

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            ++P + + Y+LLSN+YA+ G W++ AR+R L+N + +KK  G S IEV +  + F+ GD
Sbjct: 496 KIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGD 555

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
             HPQ+ +IY  LEE+   L++AG+ PDTS VLQ++++E KE  L  HSE+LAIAFGL++
Sbjct: 556 KFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 615

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T  G  L IVKNLRVC +CH   KL+SK+ +R+IV RD  RFHHF++G+CSC DYW
Sbjct: 616 TKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 231/496 (46%), Gaps = 41/496 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N ++  +   S    +L L++ +  LGL     T   +LK+C    
Sbjct: 19  SVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSK 78

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--------------- 137
               G+Q+H + +K GF  D+ V TSL+ +Y++   +ED  +VFD               
Sbjct: 79  TFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALIT 138

Query: 138 ----------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                           ++   +VVSW +++SGYA        LELF  M    ++P+  T
Sbjct: 139 GYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDEST 198

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           + TVL   A  G +    QVH+ V  +G +    + NALI +Y K   V  A  +F G+ 
Sbjct: 199 YVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLS 258

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN+++ GY    L+ EA   F  M  +G      T +SV+  CA    + + R 
Sbjct: 259 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRW 318

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    ++RT L+  Y+KCG +E A ++F+ M   K + SW AMI G   
Sbjct: 319 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLH-KSLSSWNAMIFGFAM 377

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYEKSFSVG 416
           +G  D + + F +M + G+ P+  T+  +L+A        +  HI ++   +Y+ +  + 
Sbjct: 378 HGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLE 437

Query: 417 --TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS- 472
               +++     G+  EA ++   ++ E D V W ++L      G+ E A    + L   
Sbjct: 438 HYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKI 497

Query: 473 EGVKPNEFTFSSVINA 488
           E   P+ +   S I A
Sbjct: 498 EPENPSSYILLSNIYA 513



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 167/365 (45%), Gaps = 11/365 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD  P ++ V +N ++  Y     ++EAL LF  + ++ +    ST  +VL  C   
Sbjct: 150 QKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHS 209

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQVH      GF  ++ +  +L+DLY +   VE    +F  ++  +V+SW +L+
Sbjct: 210 GSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLI 269

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK--NG 209
            GY    +    L LF  M   G  PN  T  +VL   A  G +     +H  + K   G
Sbjct: 270 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKG 329

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
               +S+  +LI MY K   +  A  VF+ M  +   +WN+M+ G+  +     +F+ F+
Sbjct: 330 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFS 389

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLH---SQVLKNGIDFDHNIRTGLMV-AY 325
            M   G E    TFV ++  C+ +  L L R +    +Q  K     +H    G M+   
Sbjct: 390 RMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEH---YGCMIDLL 446

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
              G  ++A ++ + M    D V W +++     +G ++LA +F   + +  + P   + 
Sbjct: 447 GHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIK--IEPENPSS 504

Query: 386 SIILT 390
            I+L+
Sbjct: 505 YILLS 509



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 34/261 (13%)

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           L  A  VFE I E + + W+ M+ G+A   D   ++ +Y  + S G+ PN +TF  ++ +
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR---- 544
           C A S    +G+Q H   +K   +  L V ++L++MY +   +E A +VF R   R    
Sbjct: 74  C-AKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVS 132

Query: 545 ---------------------------DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
                                      D+VSWN+MI GYA+ G  K+ALE+F+EM + ++
Sbjct: 133 YTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV 192

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
             D  T++ V++AC H+G ++ G+Q     V++H     ++  + ++DLYS+ G +E A 
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHS-WVDDHGFDSNLKIVNALIDLYSKCGEVETAC 251

Query: 638 DIINRMPFAASATVWRTVLAA 658
            +   + +      W T++  
Sbjct: 252 GLFQGLSY-KDVISWNTLIGG 271


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/791 (33%), Positives = 408/791 (51%), Gaps = 92/791 (11%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTN--NVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           Q+  + + SGF +D   ++ L+         N+    ++F  +   N     +++ GY +
Sbjct: 44  QILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQ 103

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                + + ++  M    +  +++T+  +    +          +   V+K G +    +
Sbjct: 104 RNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYI 163

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N LI+MY     + DAR VFDG    D ++WNSM+AGYV      EA + ++ M     
Sbjct: 164 QNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMP---- 219

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
              R+   S                                   ++V + K G +E+A K
Sbjct: 220 --ERNVIAS---------------------------------NSMIVLFGKKGNVEEACK 244

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP--- 393
           +F+ M++ KD+VSW+A+IS + QN   + A+  F +M   G+  +      +L+A     
Sbjct: 245 LFNEMKQ-KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLL 303

Query: 394 -AVSPFQVHAHIIKTNYEKSFSVGTALLN------------------------------- 421
             ++   VH  ++K   E   ++  AL++                               
Sbjct: 304 VVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMIS 363

Query: 422 AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            YVK G +++A  +F+ + +KD V+WSAM++GYAQ       + +++++  EG KP+E  
Sbjct: 364 GYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETI 423

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
             SVI+ACT   AA++QGK  HA   K  L   + + + L+ MY K G +E A EVFK  
Sbjct: 424 LVSVISACTH-LAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGL 482

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
            ++ + +WN++I G A +G   K+L+ F EM+   +  + ITF+ V+ AC H GLVDEG 
Sbjct: 483 EEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGH 542

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
           ++F+ M+ EH I P ++HY CMVDL  RAGML++A ++I  MP A   + W  +L AC+ 
Sbjct: 543 RHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKK 602

Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                        L+ L P      VLLSN+YA+ G+W +   VR +M    V K  G S
Sbjct: 603 YGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCS 662

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
            IE   + + FLAGD +HPQ+  I   L+E++ +LK  GY PDT  V  DID+E KE  L
Sbjct: 663 MIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTL 722

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
            +HSE+LAIAFGL+A     P++IVKNLR+C DCHT  KLISK   R+IVVRD +RFHHF
Sbjct: 723 FRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHF 782

Query: 828 KEGLCSCGDYW 838
           K+G CSC DYW
Sbjct: 783 KQGSCSCMDYW 793



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/542 (22%), Positives = 247/542 (45%), Gaps = 76/542 (14%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   + ++C        G+ +    +K GF  DV +  +L+++Y    N+ D R+VFD  
Sbjct: 128 TYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGS 187

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +  ++VSW S+L+GY      +   +++ RM                    +  ++A+  
Sbjct: 188 SVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM-------------------PERNVIAS-- 226

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
                             N++I ++ K   V +A  +F+ M+ +D ++W+++++ Y  NE
Sbjct: 227 ------------------NSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNE 268

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           ++ EA   F  M   G  +     +SV+  C+    +   + +H  V+K GI+   N++ 
Sbjct: 269 MYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQN 328

Query: 320 GLMVAYS-------------------------------KCGKMEDASKIFSMMREMKDVV 348
            L+  YS                               KCG++E A  +F  M + KD V
Sbjct: 329 ALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPD-KDNV 387

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           SW+AMISG+ Q       +  F +M  EG +P+      +++A   ++       +HA+I
Sbjct: 388 SWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYI 447

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
            K   + +  +GT L+N Y+K G +++A +VF+ ++EK +  W+A++ G A  G  + ++
Sbjct: 448 RKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSL 507

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           K + ++   GV PNE TF +V+ AC       E  + F++   + K+   +     +V +
Sbjct: 508 KTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDL 567

Query: 525 YSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
             + G ++ A E+ +      D+ +W +++    ++G  +    + +++     + DG  
Sbjct: 568 LGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFN 627

Query: 584 FI 585
            +
Sbjct: 628 VL 629



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 163/360 (45%), Gaps = 42/360 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+   Q++ V ++ L+  Y ++ +++EAL LF  +   G+ +    + SVL  C  L  
Sbjct: 245 LFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLV 304

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G+ VH   VK G    VN+  +L+ +Y     V   +++F +    + +SW S++SG
Sbjct: 305 VITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISG 364

Query: 154 YAR-----------NKMNDR--------------------VLELFHRMQVEGIKPNSFTF 182
           Y +           + M D+                     L LF  MQ+EG KP+    
Sbjct: 365 YVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETIL 424

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
            +V+        +     +H  + KNG ++   +   LI+MY+K   V DA  VF G+E+
Sbjct: 425 VSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEE 484

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           +   TWN+++ G   N L  ++ +TF+ M   G      TFV+V+  C   + + L  + 
Sbjct: 485 KGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGAC---RHMGLVDEG 541

Query: 303 HSQVLKNGIDFDHNI-----RTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           H     N +  +H I       G MV    + G +++A ++   M    DV +W A++  
Sbjct: 542 HRHF--NSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGA 599



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 14/234 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K ++LFD  P ++ V ++ ++  Y +     E L LF  ++  G     + L SV+  C
Sbjct: 372 EKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISAC 431

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G+ +H    K+G   ++ + T+L+++YM+   VED   VF  + E  V +W 
Sbjct: 432 THLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWN 491

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV-----LADEG--IVATAVQV 201
           +L+ G A N + D+ L+ F  M+  G+ PN  TF  VLG      L DEG     + +Q 
Sbjct: 492 ALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQE 551

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
           H    K G  +    C  ++ +  ++ M+++A  + + M    D  TW +++  
Sbjct: 552 H----KIGPNIKHYGC--MVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGA 599


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/696 (35%), Positives = 389/696 (55%), Gaps = 66/696 (9%)

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
           + A Q+H  V+K     + ++ + L+S+Y    ++ D+  +F+ +    ++ W S++  Y
Sbjct: 23  SQAQQLHAQVLKFQASSLCNL-SLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCY 81

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
            ++ L  ++  +F  M  +G     + F SV+K CA   +L L   LH  +++ G+DFD 
Sbjct: 82  TSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDL 141

Query: 316 NIRTGLMVAYSKCGKMEDAS--------------------------------KIFSMMRE 343
                LM  YSK   +E++                                 KIF MM E
Sbjct: 142 YTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE 201

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----- 398
            KD+VSW  +I+G+ +NG  +  +    +M    ++P+ FT S +L   P ++       
Sbjct: 202 -KDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVL---PLIAENVDISR 257

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             ++H   I+   +    V ++L++ Y K   + ++ +VF L+ E+D ++W++++AG  Q
Sbjct: 258 GKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQ 317

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G  +  ++ +RQ+    +KP  ++FSS++ AC A    +  GKQ H    +   +  + 
Sbjct: 318 NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPAC-AHLTTLHLGKQLHGYITRNGFDENIF 376

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           ++S+LV MY+K GNI +A ++F R R RD+VSW +MI G A HG    A+E+F++M    
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQM---- 432

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
            E +GI    V+TAC+H GLVDE  +YF+ M  +  I P +EHY+ + DL  RAG LE+A
Sbjct: 433 -ETEGIK--AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489

Query: 637 MDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAAT 682
            D I  M    + ++W T+L+AC              R++ + P+++  Y+LL+N+Y+A 
Sbjct: 490 YDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 549

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
             W+E A+ R  M    ++K    SWIEVKNK Y+F+AGD SHP   +I   +E L   +
Sbjct: 550 RRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELM 609

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           +  GY PDTS V  D+++E K+ ++  HSERLAI FG++ TPAG  +++ KNLRVC DCH
Sbjct: 610 EKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLRVCTDCH 669

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T  K ISK+  R+IVVRD +RFHHFK G CSCGDYW
Sbjct: 670 TATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 180/359 (50%), Gaps = 33/359 (9%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           Y    L  ++L  F+G+   GL    +   SVLK+C  L D   G  +H   ++ G   D
Sbjct: 81  YTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD 140

Query: 113 VNVSTSLVDLYMRTNNVEDG--------------------------------RRVFDDMN 140
           +    +L+++Y +   +E+                                 R++F+ M 
Sbjct: 141 LYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMP 200

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E ++VSW ++++G ARN + +  L +   M    +KP+SFT S+VL ++A+   ++   +
Sbjct: 201 EKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE 260

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H   I+ G +    V ++LI MY K   V D+  VF  + +RD I+WNS++AG V N L
Sbjct: 261 IHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGL 320

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             E    F  M +A  +    +F S++  CA    L L +QLH  + +NG D +  I + 
Sbjct: 321 FDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS 380

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           L+  Y+KCG +  A +IF  MR ++D+VSWTAMI G   +G    A+  F QM  EG++
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMR-LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK 438



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 221/449 (49%), Gaps = 44/449 (9%)

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y   N + D  R+F+ ++    ++W S++  Y  + +  + L  F  M   G+ P+   
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNV 108

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA-------- 233
           F +VL   A    +     +H  +I+ G +      NAL++MY K + + ++        
Sbjct: 109 FPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAG 168

Query: 234 ------------------------RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                                   R +F+ M ++D ++WN+++AG   N L+ E      
Sbjct: 169 EVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            MG A  +    T  SV+ L A   ++   +++H   ++ G+D D  + + L+  Y+KC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++ D+ ++F+++ E +D +SW ++I+G +QNG  D  + FF QM    ++P  +++S I+
Sbjct: 289 RVADSCRVFTLLTE-RDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   ++      Q+H +I +  ++++  + ++L++ Y K G +  A ++F+ +  +D+V
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AM+ G A  G    A++++ Q+ +EG+K       +V+ AC+      E  K F++ 
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSM 460

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +    +   +   +A+  +  + G +E A
Sbjct: 461 TRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 131/247 (53%), Gaps = 6/247 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG---LPLFGSTLSSVLKTC 88
           + +F+  P+++ V +N ++    R+ L++E L +   IR +G   L     TLSSVL   
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM---IREMGGANLKPDSFTLSSVLPLI 249

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   G+++H   ++ G   D+ V++SL+D+Y +   V D  RVF  + E + +SW 
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S+++G  +N + D  L  F +M +  IKP S++FS+++   A    +    Q+H  + +N
Sbjct: 310 SIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN 369

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +    + ++L+ MY K   +R A+ +FD M  RD ++W +M+ G   +    +A E F
Sbjct: 370 GFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELF 429

Query: 269 NNMGLAG 275
             M   G
Sbjct: 430 EQMETEG 436



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 77/143 (53%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F    +R+ + +N ++    ++ L  E L  F  +    +     + SS++  C  L  
Sbjct: 296 VFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTT 355

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H    ++GF  ++ +++SLVD+Y +  N+   +++FD M   ++VSWT+++ G
Sbjct: 356 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415

Query: 154 YARNKMNDRVLELFHRMQVEGIK 176
            A +      +ELF +M+ EGIK
Sbjct: 416 CALHGQAPDAIELFEQMETEGIK 438


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/831 (30%), Positives = 455/831 (54%), Gaps = 37/831 (4%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            + +F+   +RN V +  ++  Y +    +EAL LF  + R G+     + +S+L  C   
Sbjct: 256  RKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNP 315

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             D   G ++H    ++G  ++V V  +L+ +Y R  ++ + R+VFD++   N  +W +++
Sbjct: 316  NDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMI 375

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            +GY    M +    LF  M+ +G +P+ FT++++L + AD   +    ++H+ +   G +
Sbjct: 376  AGYGEGLM-EEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQ 434

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +V  ALISMY K     +AR VF+ M +R+ I+WN+ ++    ++L  EAF+ F  M
Sbjct: 435  TDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQM 494

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                      TF++++  C + ++L   R +H ++ + G+  ++++   L+  Y +CG +
Sbjct: 495  RRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNL 554

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             DA ++F  +R  +D+ SW AMI+ ++Q+GA   A + F +   EG + + +T+  +L A
Sbjct: 555  ADAREVFYRIRR-RDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRA 613

Query: 392  QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
               +        +H  + K  + K   V T L+  Y K G L +A  VF  + EKD+V W
Sbjct: 614  VANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCW 673

Query: 448  SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
            +AMLA YA     + A+K+++Q+  EGV P+  T+S+ +NAC A   AVE GK+ HA   
Sbjct: 674  NAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNAC-ARLTAVEHGKKIHAQLK 732

Query: 508  KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
            +A +     VS++L+ MYS+ G + SA +VF++   RD+ SWN++I GY Q+G    ALE
Sbjct: 733  EAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALE 792

Query: 568  VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
             ++ M R  +  +  TF  ++++    G  ++   + + +  E ++ P+ +HY+ MV   
Sbjct: 793  YYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAAL 852

Query: 628  SRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-ISLQPHDSAIYVLLS---------- 676
             RAG+L++A + I  +   ++A +W ++L ACR+ ++++  ++A+  LL           
Sbjct: 853  GRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVC 912

Query: 677  ----NMYAATGHWQERARVRKLMNDRKVKKEAGY-----SWIEVKNKTYSFLAGDISHPQ 727
                ++YAA G W++ + ++  M      +EAG        IEV ++ ++F+A  +S PQ
Sbjct: 913  EQLMSIYAAAGRWEDVSVLKTTM------QEAGLVALKSCTIEVNSEFHNFIANHLS-PQ 965

Query: 728  SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
               +  K+EEL  ++ D G+  D  Y     D   KE +  Q  E LA+A+GL  T +G 
Sbjct: 966  IG-VQCKIEELVRKMTDRGFSLDPQYASN--DSREKECLFFQCPELLAVAYGLEHTASGV 1022

Query: 788  PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             ++ V + RV    H ++K IS+   R I+VRD N FH F++G+CSCGDYW
Sbjct: 1023 SIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPNCFHIFEDGICSCGDYW 1073



 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 193/630 (30%), Positives = 333/630 (52%), Gaps = 9/630 (1%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++F     ++ V +N ++  Y      QEA +LF  ++R GL    +T  S+L  C    
Sbjct: 156 NVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPI 215

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              FG Q+H    K+G+  DVNVST+L+++Y +  ++E  R+VF++M E NVVSWT+++S
Sbjct: 216 ALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMIS 275

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY ++  +   L LF ++   GI+PN  +F+++LG   +   +   +++H  + + G E 
Sbjct: 276 GYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQ 335

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V NALISMY +   + +AR VFD +   +  TWN+M+AGY    L  EAF  F  M 
Sbjct: 336 EVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEG-LMEEAFRLFRAME 394

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G +  + T+ S++ +CA   +L   ++LHSQ+   G   D  + T L+  Y+KCG  E
Sbjct: 395 QKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPE 454

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A K+F+ M E ++V+SW A IS   ++     A   F QM R+ V P+  T+  +L + 
Sbjct: 455 EARKVFNQMPE-RNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSC 513

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
            +    +    +H  I +     +  V  AL++ Y + G L +A +VF  I  +D+ +W+
Sbjct: 514 TSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWN 573

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           AM+A   Q G    A  ++R+  SEG K +++TF +V+ A  A    ++ G+  H    K
Sbjct: 574 AMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRA-VANLEDLDAGRMIHGLVEK 632

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
                 + V + L+ MYSK G++  A  VF   +++D+V WN+M+  YA     + AL++
Sbjct: 633 GGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKL 692

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F++M+ + +  D  T+   + AC     V+ G++     + E  +       + ++++YS
Sbjct: 693 FQQMQLEGVNPDSSTYSTALNACARLTAVEHGKK-IHAQLKEAGMETDTRVSNSLIEMYS 751

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           R G L  A  +  +M  +     W  ++A 
Sbjct: 752 RCGCLCSAKQVFEKM-LSRDINSWNALIAG 780



 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 165/566 (29%), Positives = 311/566 (54%), Gaps = 9/566 (1%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G++VH     + F  D+ ++  L+ +Y +  ++ED   VF  M + +VVSW +++SGYA 
Sbjct: 119 GKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYAL 178

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +  +    +LF++MQ EG+KPN  TF ++L        +    Q+H+ + K G E   +V
Sbjct: 179 HGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNV 238

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             ALI+MY K   +  AR VF+ M +R+ ++W +M++GYV +    EA   F  +  +G 
Sbjct: 239 STALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGI 298

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +  + +F S++  C    +L    +LH+ + + G++ +  +   L+  YS+CG + +A +
Sbjct: 299 QPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQ 358

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  +R + +  +W AMI+G+ + G ++ A   F  M ++G +P+ FTY+ +L      +
Sbjct: 359 VFDNLRSL-NRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRA 416

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 ++H+ I  T ++   +V TAL++ Y K G  +EA KVF  + E+++++W+A ++
Sbjct: 417 DLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFIS 476

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
              +    + A + ++Q+  + V P+  TF +++N+CT+P   +E+G+  H    +  + 
Sbjct: 477 CCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPE-DLERGRYIHGKINQWGML 535

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           +   V++AL++MY + GN+  A EVF R R+RDL SWN+MI    QHG    A ++F++ 
Sbjct: 536 SNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKY 595

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R +  + D  TFI V+ A  +   +D G+     +V +      +   + ++ +YS+ G 
Sbjct: 596 RSEGGKGDKYTFINVLRAVANLEDLDAGRMIHG-LVEKGGFGKDIRVLTTLIKMYSKCGS 654

Query: 633 LEKAMDIINRMPFAASATVWRTVLAA 658
           L  A ++ + +        W  +LAA
Sbjct: 655 LRDAENVFSTVQ-EKDVVCWNAMLAA 679



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 219/393 (55%), Gaps = 9/393 (2%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +G  G +   + +   ++ C   K L   +++H  +       D  +   L+  YSKCG 
Sbjct: 91  LGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGS 150

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +EDA+ +F  M E KDVVSW AMISG+  +G    A + F QM REG++PN  T+  IL+
Sbjct: 151 IEDANNVFQAM-EDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILS 209

Query: 391 A--QPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   P    F  Q+H+ I K  YE   +V TAL+N Y K G L+ A KVF  + E+++V+
Sbjct: 210 ACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVS 269

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM++GY Q GD+  A+ ++R+L   G++PN+ +F+S++ ACT P+  + +G + HA  
Sbjct: 270 WTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPN-DLGEGLKLHAYI 328

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
            +A L   + V +AL++MYS+ G++ +A +VF   R  +  +WN+MI GY + G  ++A 
Sbjct: 329 KQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAF 387

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +F+ M ++  + D  T+  ++  C     +D G++     +        +   + ++ +
Sbjct: 388 RLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHS-QIASTGWQTDLTVATALISM 446

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           Y++ G  E+A  + N+MP   +   W   ++ C
Sbjct: 447 YAKCGSPEEARKVFNQMP-ERNVISWNAFISCC 478



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 102/183 (55%), Gaps = 5/183 (2%)

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           +GAV++   L   GV+ N   ++  +  C    +  E GK+ H     A+    + +++ 
Sbjct: 85  KGAVQL---LGKRGVQANLNFYARRLQQCVLAKSLAE-GKKVHDHMRSAQFKPDIYLNNM 140

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L++MYSK G+IE A+ VF+    +D+VSWN+MI GYA HG  ++A ++F +M+R+ L+ +
Sbjct: 141 LISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPN 200

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
             TFI +++AC     ++ G+Q    +    +    +   + ++++Y + G LE A  + 
Sbjct: 201 QNTFISILSACQSPIALEFGEQIHSRIAKAGY-ESDVNVSTALINMYCKCGSLELARKVF 259

Query: 641 NRM 643
           N M
Sbjct: 260 NEM 262


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/645 (37%), Positives = 362/645 (56%), Gaps = 53/645 (8%)

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
           S  WN ++  Y        A   +  +     E+      SV+K C      +L +++H 
Sbjct: 89  SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG 148

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            VLK G+D D  +   LM+ Y +C  +E A  +F  M E +DVVSW+ MI    +N   D
Sbjct: 149 FVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME-RDVVSWSTMIRSLSRNKEFD 207

Query: 365 LAVNFFCQMTREGVRPN--GFTYSIILTAQPAVSPF--QVHAHIIKTNYEKSFSVGT--A 418
           +A+    +M    VRP+       + L A  A       +HA++I+ +  +   V T  A
Sbjct: 208 MALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTA 267

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG------------------------- 453
           LL+ Y K G L  A ++F  + +K +V+W+AM+AG                         
Sbjct: 268 LLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIW 327

Query: 454 ------YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
                 YAQ    + A  ++ Q+ + GV+P + T  S+++ C A + A++ GK  H+   
Sbjct: 328 TAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLC-AVAGALDLGKWVHSYID 386

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K ++     +++ALV MY+K G+I +A  +F     RD+  WN++I G+A HG+ ++AL+
Sbjct: 387 KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALD 446

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F EM RQ ++ + ITFIG++ AC+HAGLV EG++ F+ MV+   + P +EHY CMVDL 
Sbjct: 447 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLL 506

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYV 673
            RAG+L++A ++I  MP   +  VW  ++AACRL              + ++P +    V
Sbjct: 507 GRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNV 566

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           L+SN+YAA   W + A VRK M    +KKE G+S IEV    + FL GD SHPQ  +I  
Sbjct: 567 LMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINE 626

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
            L E+  +L +AGY PDTS VL +ID+E KE  L+ HSE+LA+AFGL++T    P++IVK
Sbjct: 627 MLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVK 686

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVC DCH   KL+SK+  R I+VRD NRFHHF+EG CSCGDYW
Sbjct: 687 NLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 220/485 (45%), Gaps = 77/485 (15%)

Query: 45  EYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCEC 104
           ++N ++  Y + +  + ALN++  +R++   +      SVLK CG +     G+++H   
Sbjct: 91  QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +K G  RDV V  +L+ +Y     VE  R VFD M E +VVSW++++   +RNK  D  L
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMAL 210

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG--EVVTSVCNALIS 222
           EL   M    ++P+     +++ + AD   +     +H  VI+N     +      AL+ 
Sbjct: 211 ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLD 270

Query: 223 MY-------------------------------LKSKMVRDARAVFDGMEDRDSITWNSM 251
           MY                               ++S  + +ARA+FD  ++RD + W +M
Sbjct: 271 MYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAM 330

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           ++ Y       +AF  F+ M  +G   T+ T VS++ LCA    L L + +HS + K  +
Sbjct: 331 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV 390

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
           + D  + T L+  Y+KCG +  A ++F +    +D+  W A+I+G   +G  + A++ F 
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLF-IEAISRDICMWNAIITGFAMHGYGEEALDIFA 449

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           +M R+GV+PN  T+                                 LL+A    G++ E
Sbjct: 450 EMERQGVKPNDITF-------------------------------IGLLHACSHAGLVTE 478

Query: 432 AAKVFE-------LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
             K+FE       L+ + +       L G A + D     + +  + S  +KPN   + +
Sbjct: 479 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLD-----EAHEMIKSMPIKPNTIVWGA 533

Query: 485 VINAC 489
           ++ AC
Sbjct: 534 LVAAC 538



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 26/265 (9%)

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+HAHIIKT++  +  +    LN +   G+   A              W+ ++  Y +  
Sbjct: 61  QIHAHIIKTHFHHALQIP---LNDF-PSGLSPSAQ-------------WNFVITSYTKRN 103

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A+ +Y QL     + + F   SV+ AC   S   + GK+ H   +K  L+  + V 
Sbjct: 104 QPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSW-TQLGKEIHGFVLKKGLDRDVFVG 162

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +AL+ MY +   +E A  VF +  +RD+VSW++MI   +++     ALE+ +EM    + 
Sbjct: 163 NALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVR 222

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMV----NEHHIYPTMEHYSCMVDLYSRAGMLE 634
              +  + ++        +  G+     ++    NEH   PT    + ++D+Y++ G L 
Sbjct: 223 PSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTT---TALLDMYAKCGHLG 279

Query: 635 KAMDIINRMPFAASATVWRTVLAAC 659
            A  + N +    +   W  ++A C
Sbjct: 280 LARQLFNGLT-QKTVVSWTAMIAGC 303



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 112/228 (49%), Gaps = 2/228 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ ++LFD +  R+ + +  +L  Y + +   +A NLF  +R  G+     T+ S+L  C
Sbjct: 310 EEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLC 369

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+ VH    K     D  ++T+LVD+Y +  ++    R+F +    ++  W 
Sbjct: 370 AVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWN 429

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++G+A +   +  L++F  M+ +G+KPN  TF  +L   +  G+V    ++   ++  
Sbjct: 430 AIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT 489

Query: 209 GGEVV-TSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAG 254
            G V        ++ +  ++ ++ +A  +   M  + ++I W ++VA 
Sbjct: 490 FGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 537


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/758 (33%), Positives = 427/758 (56%), Gaps = 40/758 (5%)

Query: 68  GIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN 127
           GIR    P+   T SS+LK+C    D   G+ VH   ++     D  +  SL+ LY ++ 
Sbjct: 56  GIR----PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 128 NVEDGRRVFDDM---NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           +      VF+ M    + +VVSW+++++ Y  N      +++F      G+ PN + ++ 
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSK-MVRDARAVFDGMED 242
           V+   ++   V         ++K G  E    V  +LI M++K +    +A  VFD M +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
            + +TW  M+   +      EA   F +M L+G E  + T  SV   CA  + L L +QL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           HS  +++G+  D  +   L+  Y+KC   G ++D  K+F  M E   V+SWTA+I+G+++
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMK 348

Query: 360 NGAIDL-AVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF---- 413
           N  +   A+N F +M  +G V PN FT+S    A   +S  +V   ++   +++      
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           SV  ++++ +VK   +++A + FE + EK++V+++  L G  +  + E A K+  ++T  
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            +  + FTF+S+++   A   ++ +G+Q H+  +K  L+    V +AL++MYSK G+I++
Sbjct: 469 ELGVSAFTFASLLSG-VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           AS VF     R+++SW SMI G+A+HG   + LE F +M  + ++ + +T++ +++AC+H
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            GLV EG ++F+ M  +H I P MEHY+CMVDL  RAG+L  A + IN MPF A   VWR
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647

Query: 654 TVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           T L ACR              ++ L P++ A Y+ LSN+YA  G W+E   +R+ M +R 
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           + KE G SWIEV +K + F  GD +HP ++QIY +L+ L T +K  GY PDT  VL  ++
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLE 767

Query: 760 DEHKEA----ILSQHSERLAIAFGLVATPAGAPLQIVK 793
           +E+ EA    +L QHSE++A+AFGL++T    PL++++
Sbjct: 768 EENDEAEKERLLYQHSEKIAVAFGLISTSKSRPLKMIQ 805



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 285/572 (49%), Gaps = 30/572 (5%)

Query: 28  SKKDQSLFD---RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           S K + +F+   R  +R+ V ++ ++  Y  +    +A+ +F+    LGL       ++V
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172

Query: 85  LKTCGCLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMR-TNNVEDGRRVFDDMNES 142
           ++ C        GR      +K+G F  DV V  SL+D++++  N+ E+  +VFD M+E 
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           NVV+WT +++   +       +  F  M + G + + FT S+V    A+   ++   Q+H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKM---VRDARAVFDGMEDRDSITWNSMVAGYVTN- 258
           +  I++G  +V  V  +L+ MY K      V D R VFD MED   ++W +++ GY+ N 
Sbjct: 293 SWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350

Query: 259 ELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
            L  EA   F+ M   G  E    TF S  K C    + R+ +Q+  Q  K G+  + ++
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSV 410

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              ++  + K  +MEDA + F  + E K++VS+   + G  +N   + A     ++T   
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSE-KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           +  + FT++ +L+    V       Q+H+ ++K     +  V  AL++ Y K G +D A+
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF  ++ +++++W++M+ G+A+ G     ++ + Q+  EGVKPNE T+ ++++AC+   
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589

Query: 494 AAVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVS 548
              E  + F++      IK K+ +  C    +V +  + G +  A E       + D++ 
Sbjct: 590 LVSEGWRHFNSMYEDHKIKPKMEHYAC----MVDLLCRAGLLTDAFEFINTMPFQADVLV 645

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           W + +     H +T    E+ K   R+ LE D
Sbjct: 646 WRTFLGACRVHSNT----ELGKLAARKILELD 673



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 238/477 (49%), Gaps = 29/477 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+  + N V +  ++    +    +EA+  FL +   G      TLSSV   C  L +
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN---NVEDGRRVFDDMNESNVVSWTSL 150
              G+Q+H   ++SG   DV    SLVD+Y + +   +V+D R+VFD M + +V+SWT+L
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342

Query: 151 LSGYARN-KMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++GY +N  +    + LF  M  +G ++PN FTFS+      +        QV     K 
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    +SV N++ISM++KS  + DA+  F+ + +++ +++N+ + G   N    +AF+  
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + +      ++  TF S++   A    +R   Q+HSQV+K G+  +  +   L+  YSKC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++ AS++F+ M E ++V+SWT+MI+G  ++G     +  F QM  EGV+PN  TY  I
Sbjct: 523 GSIDTASRVFNFM-ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581

Query: 389 LTAQPAVSPFQ---------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           L+A   V                H IK   E        +++   + G+L +A   FE I
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY----ACMVDLLCRAGLLTDA---FEFI 634

Query: 440 D----EKDIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           +    + D++ W   L       +TE G +   + L  +  +P  +   S I AC  
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAG 691



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 151/305 (49%), Gaps = 19/305 (6%)

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRP-NGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
           +I  HL  G +  AV+    M R+G+RP +  T+S +L +      F+    VHA +I+ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELI---DEKDIVAWSAMLAGYAQIGDTEGAV 464
           + E    +  +L++ Y K G   +A  VFE +    ++D+V+WSAM+A Y   G    A+
Sbjct: 92  DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSALVT 523
           K++ +    G+ PN++ +++VI AC+  S  V  G+      +K     + +CV  +L+ 
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210

Query: 524 MYSKKGN-IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           M+ K  N  E+A +VF +  + ++V+W  MI    Q G  ++A+  F +M     E D  
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-MVDLYSRA---GMLEKAMD 638
           T   V +AC     +  G+Q     +    +    +   C +VD+Y++    G ++    
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLV----DDVECSLVDMYAKCSADGSVDDCRK 326

Query: 639 IINRM 643
           + +RM
Sbjct: 327 VFDRM 331


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/604 (40%), Positives = 340/604 (56%), Gaps = 50/604 (8%)

Query: 283 FVSVIKLCA---TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           F+S  +L      +K +    Q+H+ + ++G+D    +   L  +Y+  G+++ +  +F 
Sbjct: 27  FISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFG 86

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
             +    V  WTA+I GH   G  + A+NF+ QM  +GV PN FT+S IL   P      
Sbjct: 87  RTQN-PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKA 145

Query: 400 VHAHIIKTNY-------------------------------EKSFSVGTALLNAYVKKGI 428
           +H+  +K  +                               EKS    TA+L  Y K G 
Sbjct: 146 LHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGE 205

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           LD A  +F+ ++E+D V W+ M+ GY Q G    A+ ++R++     KPNE T  SV++A
Sbjct: 206 LDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSA 265

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C     A+E G+  H+      +   + V +ALV MYSK G++E A  VF +   +D+V+
Sbjct: 266 C-GQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVA 324

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           WNSMI GYA HG +++AL++FK M R  L    ITFIG+++AC H+G V EG   F+ M 
Sbjct: 325 WNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMK 384

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------- 660
           +E+ I P +EHY CMV+L  RAG +E+A +++  M       +W T+L ACR        
Sbjct: 385 DEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALG 444

Query: 661 ------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNK 714
                 L+     +S  Y+LLSN+YAA G+W   AR+R +M D  VKKE G S IEV NK
Sbjct: 445 EKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNK 504

Query: 715 TYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERL 774
            + FLAG ++HP+  +IY  LEE++  LK  GY P T  VL DI +  KE  L  HSE+L
Sbjct: 505 VHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKL 564

Query: 775 AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           AIAFGL+ T  G  ++IVKNLRVC DCH V KLISK+  R IVVRD NRFHHF  G CSC
Sbjct: 565 AIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSC 624

Query: 835 GDYW 838
           GDYW
Sbjct: 625 GDYW 628



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 193/445 (43%), Gaps = 68/445 (15%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H    + G      ++  L   Y     ++    +F      +V  WT+++ G+A   
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM-------------- 204
           ++++ L  + +M  +G++PN+FTFS++L +   E   A   Q   +              
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLD 167

Query: 205 VIKNGGEVVTS-------------VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
           V   GG+VV++                A+++ Y K   +  AR +FDGME+RD + WN M
Sbjct: 168 VYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVM 227

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           + GY  N +  EA   F  M  A A+    T +SV+  C     L   R +HS +  NGI
Sbjct: 228 IDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGI 287

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
            F+ ++ T L+  YSKCG +EDA  +F  + + KDVV+W +MI G+  +G    A+  F 
Sbjct: 288 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDD-KDVVAWNSMIVGYAMHGFSQEALQLFK 346

Query: 372 QMTREGVRPNGFTYSIILTA-----------------------QPAVSPF---------- 398
            M R G+ P   T+  IL+A                       +P +  +          
Sbjct: 347 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 406

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV---AWSAML 451
               Q +  +   N E    +   LL A    G +    K+ EL+ ++++     +  + 
Sbjct: 407 GHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLS 466

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVK 476
             YA +G+ +G  ++   +   GVK
Sbjct: 467 NIYAAVGNWDGVARLRTMMKDSGVK 491



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 163/367 (44%), Gaps = 38/367 (10%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +LF R+   +   +  ++  +    LH++ALN +  +   G+     T SS+LK C    
Sbjct: 83  ALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPI-- 140

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS------ 146
               G+ +H + VK GF  D+ V T L+D+Y R  +V   +++FD M E ++VS      
Sbjct: 141 --EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLT 198

Query: 147 -------------------------WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                                    W  ++ GY +N M +  L LF RM     KPN  T
Sbjct: 199 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVT 258

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             +VL      G + +   VH+ +  NG +    V  AL+ MY K   + DAR VFD ++
Sbjct: 259 VLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 318

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           D+D + WNSM+ GY  +    EA + F +M   G   T  TF+ ++  C  +  +     
Sbjct: 319 DKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 378

Query: 302 LHSQVLKNGIDFDHNIR-TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           + ++ +K+    +  I   G MV    + G +E A ++   M    D V W  ++     
Sbjct: 379 IFNK-MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 437

Query: 360 NGAIDLA 366
           +G I L 
Sbjct: 438 HGKIALG 444


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/687 (35%), Positives = 375/687 (54%), Gaps = 20/687 (2%)

Query: 78  GSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
           G TL  V+K+C  L     GR VH      G  RD+ V ++L+ +Y     ++  R VFD
Sbjct: 147 GHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFD 206

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            M+E + V W  ++ GY +       + LF  M+  G  PN  T +  L V A E  + +
Sbjct: 207 GMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLS 266

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
            VQ+HT+ +K G E   +V N L+SMY K + + +A  +F  M   D +TWN M++G V 
Sbjct: 267 GVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQ 326

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           N L  +A   F +M  +G +    T  S++         +  +++H  +++N    D  +
Sbjct: 327 NGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFL 386

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            + L+  Y KC  +  A  +F   + + DVV  + MISG++ N   + AV  F  +   G
Sbjct: 387 VSALVDIYFKCRDVRMAQNVFDATKSI-DVVIGSTMISGYVLNRMSEAAVKMFRYLLALG 445

Query: 378 VRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           ++PN    +  L A  +++  ++    H +++K  YE    V +AL++ Y K G LD + 
Sbjct: 446 IKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSH 505

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            +F  +  KD V W++M++ +AQ G+ E A+ ++RQ+  EGVK N  T SS+++AC A  
Sbjct: 506 YMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSAC-AGL 564

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            A+  GK+ H   IK  +   L   SAL+ MY K GN+E A  VF+   +++ VSWNS+I
Sbjct: 565 PAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSII 624

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
             Y  HG  K+++++   M+ +  + D +TF+ +I+AC HAG V EG + F  M  E+HI
Sbjct: 625 SAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHI 684

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------------- 660
            P +EH SCMVDLYSRAG L+KAM  I  MPF   A +W  +L ACR             
Sbjct: 685 EPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQ 744

Query: 661 -LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
            L  L PH+   YVL+SN+ A  G W   +++R+LM D+KV+K  GYSW++V N ++ F+
Sbjct: 745 ELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFV 804

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAG 746
           A D +HP S +IY  L+ L   LK  G
Sbjct: 805 AADKNHPDSEEIYMSLKSLIIELKQEG 831



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/592 (27%), Positives = 295/592 (49%), Gaps = 18/592 (3%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGF-----ARDVNVSTSLVDLYMRTNNVEDGRRV 135
           L ++L+ C        G ++H   V SG           + T LV +Y+      D   V
Sbjct: 39  LLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAV 98

Query: 136 FDDMNESNV---VSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLA 190
           F  +  +     + W  L+ G+     +   +  + +M       +P+  T   V+   A
Sbjct: 99  FSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCA 158

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
             G +     VH      G +    V +ALI MY  + ++  AR VFDGM++RD + WN 
Sbjct: 159 ALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNV 218

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           M+ GYV       A   F  M  +G +   +T    + +CA   +L    QLH+  +K G
Sbjct: 219 MMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYG 278

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           ++ +  +   L+  Y+KC  +E+A ++F +M    D+V+W  MISG +QNG +D A+  F
Sbjct: 279 LEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPR-DDLVTWNGMISGCVQNGLVDDALRLF 337

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
           C M + G++P+  T + +L A   ++ F    ++H +I++        + +AL++ Y K 
Sbjct: 338 CDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKC 397

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
             +  A  VF+     D+V  S M++GY     +E AVK++R L + G+KPN    +S +
Sbjct: 398 RDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTL 457

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
            AC A  AA+  G++ H   +K        V SAL+ MYSK G ++ +  +F +   +D 
Sbjct: 458 PAC-ASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDE 516

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           V+WNSMI  +AQ+G  ++AL++F++M  + ++++ +T   +++AC     +  G++   I
Sbjct: 517 VTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGI 576

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           ++ +  I   +   S ++D+Y + G LE A+ +   MP   +   W ++++A
Sbjct: 577 II-KGPIRADLFAESALIDMYGKCGNLELALRVFEHMP-EKNEVSWNSIISA 626



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 285/555 (51%), Gaps = 16/555 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ V +N ++  Y +      A+ LF  +R  G     +TL+  L  C   
Sbjct: 202 REVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAE 261

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D + G Q+H   VK G   +V V+ +LV +Y +   +E+  R+F  M   ++V+W  ++
Sbjct: 262 ADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMI 321

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG  +N + D  L LF  MQ  G++P+S T +++L  L +        ++H  +++N   
Sbjct: 322 SGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAH 381

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           V   + +AL+ +Y K + VR A+ VFD  +  D +  ++M++GYV N +   A + F  +
Sbjct: 382 VDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYL 441

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +       S +  CA+   +R+ ++LH  VLKN  +    + + LM  YSKCG++
Sbjct: 442 LALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRL 501

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + +  +FS M   KD V+W +MIS   QNG  + A++ F QM  EGV+ N  T S IL+A
Sbjct: 502 DLSHYMFSKM-SAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSA 560

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +       ++H  IIK          +AL++ Y K G L+ A +VFE + EK+ V+W
Sbjct: 561 CAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSW 620

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-- 505
           +++++ Y   G  + +V +   +  EG K +  TF ++I+AC A +  V++G +   C  
Sbjct: 621 NSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISAC-AHAGQVQEGLRLFRCMT 679

Query: 506 ---SIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGH 561
               I+ ++ +  C    +V +YS+ G ++ A + +     K D   W +++     H +
Sbjct: 680 EEYHIEPQVEHLSC----MVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRN 735

Query: 562 TKKALEVFKEMRRQD 576
            + A    +E+ + D
Sbjct: 736 VELAEIASQELFKLD 750


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/787 (31%), Positives = 414/787 (52%), Gaps = 68/787 (8%)

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
           C + G    +  +   ++L++  N +     +F           +SL+ G++   +  + 
Sbjct: 75  CTEMGTFESLEYAQKALELFIEDNGIMGTHYMF-----------SSLIRGFSACGLGYKA 123

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           + +F ++   G  P++FTF  VL        +    QVH  ++K G E    V N+LI  
Sbjct: 124 IVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHF 183

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y +   +   R VFD M +R+ ++W S++ GY     + EA   F  M   G      T 
Sbjct: 184 YGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTM 243

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           V VI  CA  ++L+L  Q+ + + +  ++ +  +   L+  Y KCG ++ A KIF    +
Sbjct: 244 VGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVD 303

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---- 399
            K++V +  ++S +++ G     +    +M + G RP+  T   +L+A  A S       
Sbjct: 304 -KNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRIT---MLSAVSACSELDDVSC 359

Query: 400 ---VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
               H ++++   E   +V  A++N Y+K G  + A +VF+ +  K  V+W++++AG+ +
Sbjct: 360 GKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVR 419

Query: 457 IGDTEGAVKIY-------------------------------RQLTSEGVKPNEFTFSSV 485
            GD E A KI+                               R + SEG+  ++ T   V
Sbjct: 420 NGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGV 479

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
            +AC     A++  K  H    K  ++  + + +ALV M+++ G+ +SA +VF +  KRD
Sbjct: 480 ASAC-GYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRD 538

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           + +W + I   A  G+   A+E+F EM +Q ++ DG+ F+ ++TA +H GLV++G   F 
Sbjct: 539 VSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFR 598

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----- 660
            M + + I P   HY CMVDL  RAG+L +A+ +IN M    +  +W ++LAACR     
Sbjct: 599 SMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNV 658

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    +  L P  + I+VLLSN+YA+ G W + A+VR  + ++   K  G S IE+
Sbjct: 659 DIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEI 718

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
             K + F  GD SHP+   I   L+E+  RL+D GY PD + VL D++++ KE +LS+HS
Sbjct: 719 NGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHS 778

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+LAIAF L++T  G P+++ KNLR+C DCH+  KL+SK   R+I+VRD NRFH F++G 
Sbjct: 779 EKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGF 838

Query: 832 CSCGDYW 838
           CSCGDYW
Sbjct: 839 CSCGDYW 845



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 272/616 (44%), Gaps = 43/616 (6%)

Query: 6   ALKSLINPQTKQPPKSLRSPFYSKKDQSLF--DRSPQRNFVEYNRLLFEYCRDSLHQEAL 63
           +L +LI+  T+    +  S  Y++K   LF  D         ++ L+  +    L  +A+
Sbjct: 67  SLTNLISSCTEM--GTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAI 124

Query: 64  NLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY 123
            +F  +  +G      T   VL  C        G QVH   VK GF RD+ V  SL+  Y
Sbjct: 125 VVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFY 184

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
                ++  RRVFD M+E NVVSWTSL+ GYA+       + LF  M   GI+PNS T  
Sbjct: 185 GECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMV 244

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
            V+   A    +    QV T + +   EV   + NAL+ MY+K   +  AR +FD   D+
Sbjct: 245 GVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDK 304

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           + + +N++++ YV   L  E       M   G    R T +S +  C+   ++   +  H
Sbjct: 305 NLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCH 364

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGK-------------------------------ME 332
             VL+NG++   N+   ++  Y KCGK                               ME
Sbjct: 365 GYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDME 424

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A KIFS M +  D+VSW  MI   +Q      A+  F  M  EG+  +  T   + +A 
Sbjct: 425 SAWKIFSAMPD-SDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASAC 483

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +        +H +I K +      +GTAL++ + + G    A +VF  + ++D+ AW+
Sbjct: 484 GYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWT 543

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSI 507
           A +   A  G+  GA++++ ++  +G+KP+   F +++ A  +    VEQG   F +   
Sbjct: 544 AAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTA-LSHGGLVEQGWHIFRSMKD 602

Query: 508 KAKLNNALCVSSALVTMYSKKGNI-ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
              +         +V +  + G + E+ S +   Q + + V W S++     H +   A 
Sbjct: 603 IYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAA 662

Query: 567 EVFKEMRRQDLEFDGI 582
              + +   D E  GI
Sbjct: 663 YAAERISELDPERTGI 678



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 199/402 (49%), Gaps = 41/402 (10%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED---ASK 336
           RS+     K C T  EL+   QLHSQ+ KNG++      T L+ + ++ G  E    A K
Sbjct: 33  RSSPTGSFKKCKTMTELK---QLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQK 89

Query: 337 IFSMMREMKDVVS----WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
              +  E   ++     ++++I G    G    A+  F Q+   G  P+ FT+  +L+A 
Sbjct: 90  ALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSAC 149

Query: 392 ---QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                    FQVH  I+K  +E+   V  +L++ Y + G +D   +VF+ + E+++V+W+
Sbjct: 150 TKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWT 209

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +++ GYA+ G  + AV ++ ++   G++PN  T   VI+AC A    ++ G+Q   C  +
Sbjct: 210 SLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISAC-AKLQDLQLGEQVCTCIGE 268

Query: 509 AKLN-NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
            +L  NAL V +ALV MY K G I+ A ++F     ++LV +N+++  Y + G  ++ L 
Sbjct: 269 LELEVNALMV-NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLA 327

Query: 568 VFKEMRRQDLEFDGITFIGVITACT-----------HAGLVDEGQQYFDIMVNEHHIYPT 616
           V  EM +     D IT +  ++AC+           H  ++  G + +D + N       
Sbjct: 328 VLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNA------ 381

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                 ++++Y + G  E A  + +RM    +   W +++A 
Sbjct: 382 ------IINMYMKCGKQEMACRVFDRM-LNKTRVSWNSLIAG 416


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/624 (37%), Positives = 358/624 (57%), Gaps = 21/624 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR +FD     D   WN+++  Y  N ++ +  E +  M   G      TF  V+K C  
Sbjct: 107 ARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE 166

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             +  L+  +H Q++K G   D  ++ GL+  Y+KCG +  A  +F  +   + +VSWT+
Sbjct: 167 LLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYH-RTIVSWTS 225

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTN 408
           +ISG+ QNG    A+  F QM   GV+P+      IL A   V   +    +H  +IK  
Sbjct: 226 IISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMG 285

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
            E   ++  +L   Y K G++  A   F+ +   +++ W+AM++GYA+ G  E AV ++ 
Sbjct: 286 LEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFH 345

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            + S  +KP+  T  S + A +A   ++E  +       K+   + + V+++L+ MY+K 
Sbjct: 346 YMISRNIKPDSVTVRSAVLA-SAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKC 404

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G++E A  VF R   +D+V W++MI GY  HG   +A+ ++  M++  +  + +TFIG++
Sbjct: 405 GSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLL 464

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
           TAC H+GLV EG + F  M  +  I P  EHYSC+VDL  RAG L +A   I ++P    
Sbjct: 465 TACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPG 523

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
            +VW  +L+AC+              L SL P+++  YV LSN+YA++  W   A VR L
Sbjct: 524 VSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVL 583

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M ++ + K+ GYS IE+  K  +F  GD SHP + +I+ +L+ L  RLK+ G+ P T  V
Sbjct: 584 MREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESV 643

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L D++ E KE  LS HSER+A+A+GL++T  G  L+I KNLR C +CH+ IKLISKL  R
Sbjct: 644 LHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISKLVER 703

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +I+VRD NRFHHFK+GLCSCGDYW
Sbjct: 704 EIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 204/411 (49%), Gaps = 6/411 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H   V SG   +  + T LV+       +   R++FD+    +V  W +++  Y+RN 
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           M    +E++  M+  G+ P+ FTF  VL    +      +  +H  +IK G      V N
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            L+++Y K   +  A+ VFDG+  R  ++W S+++GY  N   +EA   F+ M   G + 
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
                VS+++      +L   R +H  V+K G++ +  +   L   Y+KCG +  A   F
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M+   +V+ W AMISG+ +NG  + AVN F  M    ++P+  T    + A   V   
Sbjct: 314 DQMKT-TNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSL 372

Query: 399 QVHA----HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           ++      ++ K+NY     V T+L++ Y K G ++ A +VF+   +KD+V WSAM+ GY
Sbjct: 373 ELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGY 432

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
              G    A+ +Y  +   GV PN+ TF  ++ AC   S  V++G +   C
Sbjct: 433 GLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNH-SGLVKEGWELFHC 482



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 222/457 (48%), Gaps = 33/457 (7%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   LFD     +   +N ++  Y R++++++ + ++  +R  G+   G T   VLK
Sbjct: 106 YARK---LFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLK 162

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L D      +H + +K GF  DV V   LV LY +  ++   + VFD +    +VS
Sbjct: 163 ACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVS 222

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WTS++SGYA+N      L +F +M+  G+KP+     ++L    D   +     +H  VI
Sbjct: 223 WTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVI 282

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G E   ++  +L + Y K  +V  A++ FD M+  + I WN+M++GY  N    EA  
Sbjct: 283 KMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVN 342

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M     +    T  S +   A    L LA+ +   V K+    D  + T L+  Y+
Sbjct: 343 LFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYA 402

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG +E A ++F    + KDVV W+AMI G+  +G    A+N +  M + GV PN  T+ 
Sbjct: 403 KCGSVEFARRVFDRNSD-KDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFI 461

Query: 387 IILTAQPAVSPFQVHAHIIKTNYE-----KSFSV------GTALLNAYVKKGILDEA-AK 434
            +LTA         H+ ++K  +E     K F +       + +++   + G L EA A 
Sbjct: 462 GLLTACN-------HSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEACAF 514

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           + ++  E  +  W A+L+          A KIYR +T
Sbjct: 515 IMKIPIEPGVSVWGALLS----------ACKIYRCVT 541


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/681 (34%), Positives = 389/681 (57%), Gaps = 23/681 (3%)

Query: 97  GRQVHCECVKSGFA--RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            + VH   +KS F+    + +   +   Y + ++++   R+FD M++ N  SWT L++G 
Sbjct: 87  AKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGL 146

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A N +     E F  MQ +GI P+ F +S +L +      +     VH  ++  G    T
Sbjct: 147 AENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHT 206

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  AL++MY K + + D+  VF+ M + + ++WN+M+ G+ +N+L+++AF+ F  M   
Sbjct: 207 FVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGE 266

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G      TF+ V K     +++  A+++    L+ G+D +  + T L+   SKCG +++A
Sbjct: 267 GVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEA 326

Query: 335 SKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
             IF S     +    W AMISG+L++G  + A+  F +M +  +  + +TY  +  A  
Sbjct: 327 RSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIA 386

Query: 394 AVSPF----QVHAHIIKTNYEKSF-SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
           A+       +VHA  IK+  E ++ S+  A+ NAY K G L++  KVF  ++++D+++W+
Sbjct: 387 ALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWT 446

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +++  Y+Q  + + A++I+  + +EG+ PN+FTFSSV+ +C A    +E G+Q H    K
Sbjct: 447 SLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSC-ANLCLLEYGQQVHGIICK 505

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L+   C+ SALV MY+K G +  A +VF R    D VSW ++I G+AQHG    AL++
Sbjct: 506 VGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQL 565

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M +  +E + +TF+ V+ AC+H GLV+EG QYF +M   + + P MEHY+C+VDL S
Sbjct: 566 FRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLS 625

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           R G L  AM+ I+RMP   +  VW+T+L ACR              ++S +  +SA YVL
Sbjct: 626 RVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVL 685

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN Y  +G +++   +R +M ++ VKKE G SWI V    + F AGD  HP+ ++IY+K
Sbjct: 686 LSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAK 745

Query: 735 LEELSTRLKDAGYKPDTSYVL 755
           LEEL  +L      PD SY L
Sbjct: 746 LEELKLKLISLDDVPDLSYEL 766



 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 287/546 (52%), Gaps = 25/546 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+  QRN   +  L+     + L  +    F  ++  G+       S +L+ C  L  
Sbjct: 127 LFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDS 186

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  VH + V  GF     VST+L+++Y +   +ED  +VF+ M E NVVSW ++++G
Sbjct: 187 IELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITG 246

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTV---LGVLADEGIVATAVQVHTMVIKNGG 210
           +  N +     +LF RM  EG+ P++ TF  V   +G+L D   V  A +V    ++ G 
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRD---VNKAKEVSGYALELGV 303

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETF 268
           +  T V  ALI M  K   +++AR++F+   +  R +  WN+M++GY+ +  + +A E F
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELF 363

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSK 327
             M      L   T+ SV    A  K L L +++H++ +K+G++ ++ +I   +  AY+K
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +ED  K+F+ M + +D++SWT++++ + Q    D A+  F  M  EG+ PN FT+S 
Sbjct: 424 CGSLEDVRKVFNRMED-RDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSS 482

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L +   +       QVH  I K   +    + +AL++ Y K G L +A KVF  I   D
Sbjct: 483 VLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNAD 542

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            V+W+A++AG+AQ G  + A++++R++   GV+PN  TF  V+ AC+     VE+G Q+ 
Sbjct: 543 TVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACS-HGGLVEEGLQYF 601

Query: 504 ACSIKA-----KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYA 557
               K      ++ +  C+    V + S+ G++  A E   R   + + + W +++    
Sbjct: 602 KLMKKTYGLVPEMEHYACI----VDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACR 657

Query: 558 QHGHTK 563
            HG+ +
Sbjct: 658 VHGNVE 663



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 104/183 (56%), Gaps = 4/183 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           + +F+R   R+ + +  L+  Y + S   +A+ +F  +R  G+     T SSVL +C   
Sbjct: 431 RKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANL 490

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           CL +  +G+QVH    K G   D  + ++LVD+Y +   + D ++VF+ ++ ++ VSWT+
Sbjct: 491 CLLE--YGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTA 548

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G+A++ + D  L+LF RM   G++PN+ TF  VL   +  G+V   +Q   ++ K  
Sbjct: 549 IIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTY 608

Query: 210 GEV 212
           G V
Sbjct: 609 GLV 611


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/646 (37%), Positives = 372/646 (57%), Gaps = 28/646 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LIS Y K   V  A  +FD M   DS+++N+++A Y        AF+ F  M  A  +
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T   +I  C     + L RQLH+  +  G+D   ++   L+ +YSK G +++A +I
Sbjct: 138 MDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRI 195

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QP 393
           F  + E +D VSW +M+  ++Q+     A+  + +MT  G+  + FT + +LTA    Q 
Sbjct: 196 FHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQD 255

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLA 452
            +   Q HA +IK+ Y ++  VG+ L++ Y K  G + +  KVF+ I   D+V W+ M++
Sbjct: 256 LLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS 315

Query: 453 GYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           GY+   D ++ A++ +RQL   G +P++ +   VI+AC+  S+   QG+Q H  ++K  +
Sbjct: 316 GYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSP-SQGRQVHGLALKLDI 374

Query: 512 -NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            +N + V++AL+ MYSK GN+  A  +F    + + VS+NSMI GYAQHG   ++L +F+
Sbjct: 375 PSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQ 434

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M   D     ITFI V+ AC H G V++G+ YF++M  +  I P   H+SCM+DL  RA
Sbjct: 435 RMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRA 494

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLS 676
           G L +A  +I  +PF      W  +L AC              RL+ L P ++A YV+L+
Sbjct: 495 GKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLA 554

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N+Y+  G  Q+ A VRKLM DR VKK+ G SWIEV  + + F+A D  HP   +I   LE
Sbjct: 555 NIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLE 614

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDD----EHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           E+  ++K  GY P+        DD      +E  L  HSE+LA++FGL++T  G P+ + 
Sbjct: 615 EMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVF 674

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+C DCH  IK IS++ +R+I VRD++RFH FK+G CSCG YW
Sbjct: 675 KNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 222/454 (48%), Gaps = 13/454 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y +    LFD  PQ + V YN L+  Y R    Q A  LFL +R   L + G TLS ++ 
Sbjct: 89  YVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIIT 148

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVV 145
            CG     +  RQ+H   V +G    V+V  +L+  Y +   +++ RR+F  ++E  + V
Sbjct: 149 ACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEV 206

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW S++  Y +++   + LEL+  M V G+  + FT ++VL    +   +   +Q H  +
Sbjct: 207 SWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKL 266

Query: 206 IKNGGEVVTSVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGY-VTNELHME 263
           IK+G    + V + LI +Y K    + D R VFD + + D + WN+M++GY +  +L  E
Sbjct: 267 IKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDE 326

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLM 322
           A E F  +   G      + V VI  C+        RQ+H   LK  I  +  ++   L+
Sbjct: 327 ALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALI 386

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YSKCG + DA  +F  M E  + VS+ +MI+G+ Q+G    +++ F +M      P  
Sbjct: 387 AMYSKCGNLRDAKTLFDTMPE-HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTN 445

Query: 383 FTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFE 437
            T+  +L A      V   +++ +++K  +      G  + +++   + G L EA ++ E
Sbjct: 446 ITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIE 505

Query: 438 LID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            I  +     WSA+L      G+ E A+K   +L
Sbjct: 506 TIPFDPGFFXWSALLGACRIHGNVELAIKAANRL 539



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 147/546 (26%), Positives = 259/546 (47%), Gaps = 52/546 (9%)

Query: 77  FGSTLSSV---LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGR 133
           F S L S    LKTC    D   G+ +H   +KS       +S   + LY +   +   R
Sbjct: 4   FSSLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAAR 63

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           RVFD  ++ NV S+ +L+S YA+    +  +E+ H++  E  +P+S +++T++   A  G
Sbjct: 64  RVFDHTHDCNVFSFNTLISAYAK----ESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRG 119

Query: 194 ---------------------------IVATAV------QVHTMVIKNGGEVVTSVCNAL 220
                                      I A  +      Q+H + +  G +   SV NAL
Sbjct: 120 DTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNAL 179

Query: 221 ISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           I+ Y K+  +++AR +F  + EDRD ++WNSMV  Y+ +    +A E +  M + G  + 
Sbjct: 180 ITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVD 239

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK-MEDASKIF 338
             T  SV+      ++L    Q H++++K+G   + ++ +GL+  YSKCG  M D  K+F
Sbjct: 240 IFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVF 299

Query: 339 SMMREMKDVVSWTAMISGH-LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
             +    D+V W  MISG+ L     D A+  F Q+   G RP+  +   +++A   +S 
Sbjct: 300 DEISN-PDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSS 358

Query: 398 ----FQVHAHIIKTNYEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                QVH   +K +   +  SV  AL+  Y K G L +A  +F+ + E + V++++M+A
Sbjct: 359 PSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIA 418

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK-QFHACSIKAKL 511
           GYAQ G    ++ +++++      P   TF SV+ AC A +  VE GK  F+    K  +
Sbjct: 419 GYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAAC-AHTGRVEDGKIYFNMMKQKFGI 477

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
                  S ++ +  + G +  A  + +          W++++     HG+ + A++   
Sbjct: 478 EPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAAN 537

Query: 571 EMRRQD 576
            + + D
Sbjct: 538 RLLQLD 543



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 189/398 (47%), Gaps = 36/398 (9%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF--- 338
           +F   +K C   ++LR  + LH+  +K+ +     +    ++ YSKC ++  A ++F   
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 339 -------------------------SMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFC 371
                                     +  EM   D VS+  +I+ + + G    A   F 
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
           +M    +  +GFT S I+TA         Q+HA  + T  +   SVG AL+ +Y K G L
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFL 189

Query: 430 DEAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
            EA ++F  + E +D V+W++M+  Y Q  +   A+++Y ++T  G+  + FT +SV+ A
Sbjct: 190 KEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTA 249

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN-IESASEVFKRQRKRDLV 547
            T     +  G QFHA  IK+  +    V S L+ +YSK G  +    +VF      DLV
Sbjct: 250 FTNVQDLL-GGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLV 308

Query: 548 SWNSMICGYAQHGH-TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
            WN+MI GY+ +   + +ALE F++++      D  + + VI+AC++     +G+Q   +
Sbjct: 309 LWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGL 368

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
            +        +   + ++ +YS+ G L  A  + + MP
Sbjct: 369 ALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/652 (37%), Positives = 362/652 (55%), Gaps = 74/652 (11%)

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           N   V+ S  N LI+ Y++   +  A  VF+ M+ + ++TWNS++A +     H E    
Sbjct: 37  NNNNVIAS--NKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFE---- 90

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-------DHNIRTG 320
                       R  F  + +    +  + LA   H   + +   F       D      
Sbjct: 91  ----------YARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNT 140

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           ++ A ++ G M +A ++FS M E K+ VSW+AM+SG++  G +D AV  F          
Sbjct: 141 MISALAQVGLMGEARRLFSAMPE-KNCVSWSAMVSGYVACGDLDAAVECF---------- 189

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
                     A P                 +S    TA++  Y+K G ++ A ++F+ + 
Sbjct: 190 ---------YAAPM----------------RSVITWTAMITGYMKFGRVELAERLFQEMS 224

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            + +V W+AM+AGY + G  E  ++++R +   GVKPN  + +SV+  C+  SA ++ GK
Sbjct: 225 MRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSA-LQLGK 283

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q H    K  L++     ++LV+MYSK G+++ A E+F +  ++D+V WN+MI GYAQHG
Sbjct: 284 QVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHG 343

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             KKAL +F EM+++ L+ D ITF+ V+ AC HAGLVD G QYF+ M  +  I    EHY
Sbjct: 344 AGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHY 403

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQP 666
           +CMVDL  RAG L +A+D+I  MPF     ++ T+L ACR              L+ L P
Sbjct: 404 ACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDP 463

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
             +  YV L+N+YAA   W   A +R+ M D  V K  GYSWIE+ +  + F + D  HP
Sbjct: 464 TIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHP 523

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           +   I+ KL++L  ++K AGY PD  +VL D+ +E KE +L  HSE+LAIAFGL+  P G
Sbjct: 524 ELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLG 583

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            P+++ KNLRVCGDCH+  K IS +E R+I+VRDT RFHHFK+G CSC DYW
Sbjct: 584 VPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 205/413 (49%), Gaps = 34/413 (8%)

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE-GIVA 196
           + N +NV++   L++ Y R    D  + +F  M+V+    ++ T++++L   A + G   
Sbjct: 35  EFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVK----STVTWNSILAAFAKKPGHFE 90

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
            A Q+   + +      T   N +++ +     V DAR  FD M  +D  +WN+M++   
Sbjct: 91  YARQLFEKIPQPN----TVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALA 146

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDH 315
              L  EA   F+ M      ++ S  VS    C    +L  A +  ++  +++ I +  
Sbjct: 147 QVGLMGEARRLFSAMPEKNC-VSWSAMVSGYVACG---DLDAAVECFYAAPMRSVITW-- 200

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
              T ++  Y K G++E A ++F  M  M+ +V+W AMI+G+++NG  +  +  F  M  
Sbjct: 201 ---TAMITGYMKFGRVELAERLFQEM-SMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLE 256

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
            GV+PN  + + +L     +S      QVH  + K       + GT+L++ Y K G L +
Sbjct: 257 TGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKD 316

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A ++F  I  KD+V W+AM++GYAQ G  + A++++ ++  EG+KP+  TF +V+ AC  
Sbjct: 317 AWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNH 376

Query: 492 PSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
            +  V+ G Q+         I+ K  +  C    +V +  + G +  A ++ K
Sbjct: 377 -AGLVDLGVQYFNTMRRDFGIETKPEHYAC----MVDLLGRAGKLSEAVDLIK 424



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 182/418 (43%), Gaps = 68/418 (16%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN-DRVLELFHRM 170
           +V  S  L+  Y+R  +++   RVF+DM   + V+W S+L+ +A+   + +   +LF ++
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99

Query: 171 QVEGIKPNSFTF-------------------------------STVLGVLADEGIVATAV 199
                +PN+ ++                               +T++  LA  G++  A 
Sbjct: 100 P----QPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEAR 155

Query: 200 QVHT-MVIKN--------GGEVVTSVCNA------------------LISMYLKSKMVRD 232
           ++ + M  KN         G V     +A                  +I+ Y+K   V  
Sbjct: 156 RLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVEL 215

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  +F  M  R  +TWN+M+AGYV N    +    F  M   G +    +  SV+  C+ 
Sbjct: 216 AERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSN 275

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              L+L +Q+H  V K  +  D    T L+  YSKCG ++DA ++F  +   KDVV W A
Sbjct: 276 LSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR-KDVVCWNA 334

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           MISG+ Q+GA   A+  F +M +EG++P+  T+  +L A        +      T   + 
Sbjct: 335 MISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNT-MRRD 393

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           F + T   +      +L  A K+ E +D    + +    A Y   G   GA +I++ L
Sbjct: 394 FGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIY---GTLLGACRIHKNL 448



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 144/311 (46%), Gaps = 9/311 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +  FD  P ++   +N ++    +  L  EA  LF  +       + + +S  +  CG L
Sbjct: 124 RGFFDSMPLKDVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYV-ACGDL 182

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              V       EC  +   R V   T+++  YM+   VE   R+F +M+   +V+W +++
Sbjct: 183 DAAV-------ECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMI 235

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY  N   +  L LF  M   G+KPN+ + ++VL   ++   +    QVH +V K    
Sbjct: 236 AGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLS 295

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T+   +L+SMY K   ++DA  +F  +  +D + WN+M++GY  +    +A   F+ M
Sbjct: 296 SDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEM 355

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGK 330
              G +    TFV+V+  C     + L  Q  + + ++ GI+        ++    + GK
Sbjct: 356 KKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGK 415

Query: 331 MEDASKIFSMM 341
           + +A  +   M
Sbjct: 416 LSEAVDLIKSM 426


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/646 (37%), Positives = 372/646 (57%), Gaps = 28/646 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LIS Y K   V  A  +FD M   DS+++N+++A Y        AF+ F  M  A  +
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLD 137

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T   +I  C     + L RQLH+  +  G+D   ++   L+ +YSK G +++A +I
Sbjct: 138 MDGFTLSGIITACGIN--VGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRI 195

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QP 393
           F  + E +D VSW +M+  ++Q+     A+  + +MT  G+  + FT + +LTA    Q 
Sbjct: 196 FHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQD 255

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLA 452
            +   Q HA +IK+ Y ++  VG+ L++ Y K  G + +  KVF+ I   D+V W+ M++
Sbjct: 256 LLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMIS 315

Query: 453 GYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           GY+   D ++ A++ +RQL   G +P++ +   VI+AC+  S+   QG+Q H  ++K  +
Sbjct: 316 GYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSP-SQGRQVHGLALKLDI 374

Query: 512 -NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            +N + V++AL+ MYSK GN+  A  +F    + + VS+NSMI GYAQHG   ++L +F+
Sbjct: 375 PSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQ 434

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M         ITFI V+ AC H G V++G+ YF++M  +  I P   H+SCM+DL  RA
Sbjct: 435 RMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRA 494

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLS 676
           G L +A  +I  +PF      W  +L AC              RL+ L P ++A YV+L+
Sbjct: 495 GKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLA 554

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N+Y+  G  Q+ A VRKLM DR VKK+ G SWIEV  + + F+A D  HP   +I   LE
Sbjct: 555 NIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLE 614

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDD----EHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           E+  ++K  GY P+    L   DD      +E  L  HSE+LA++FGL++T  G P+ + 
Sbjct: 615 EMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTREGEPILVF 674

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+C DCH  IK IS++ +R+I VRD++RFH FK+G CSCG YW
Sbjct: 675 KNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 224/454 (49%), Gaps = 13/454 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y +    LFD  PQ + V YN L+  Y R    Q A  LFL +R   L + G TLS ++ 
Sbjct: 89  YVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIIT 148

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES-NVV 145
            CG     +  RQ+H   V +G    V+V  +L+  Y +   +++ RR+F  ++E  + V
Sbjct: 149 ACGINVGLI--RQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEV 206

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW S++  Y +++   + LEL+  M V G+  + FT ++VL    +   +   +Q H  +
Sbjct: 207 SWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKL 266

Query: 206 IKNGGEVVTSVCNALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGY-VTNELHME 263
           IK+G    + V + LI +Y K    + D R VFD + + D + WN+M++GY +  +L  E
Sbjct: 267 IKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDE 326

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLM 322
           A E F  + + G      + V VI  C+        RQ+H   LK  I  +  ++   L+
Sbjct: 327 ALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALI 386

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YSKCG + DA  +F  M E  + VS+ +MI+G+ Q+G    +++ F +M   G  P  
Sbjct: 387 AMYSKCGNLRDAKTLFDTMPE-HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTN 445

Query: 383 FTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFE 437
            T+  +L A      V   +++ +++K  +      G  + +++   + G L EA ++ E
Sbjct: 446 ITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIE 505

Query: 438 LID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            I  +     WSA+L      G+ E A+K   +L
Sbjct: 506 TIPFDPGFFFWSALLGACRIHGNVELAIKAANRL 539



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 256/535 (47%), Gaps = 49/535 (9%)

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           LKTC    D   G+ +H   +KS       +S   + LY +   +   RRVFD  ++ NV
Sbjct: 15  LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG----------- 193
            S+ +L+S YA+    +  +E+ H++  E  +P+S +++T++   A  G           
Sbjct: 75  FSFNTLISAYAK----ESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 194 ----------------IVATAV------QVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
                           I A  +      Q+H + +  G +   SV NALI+ Y K+  ++
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 232 DARAVFDGM-EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           +AR +F  + EDRD ++WNSMV  Y+ +    +A E +  M + G  +   T  SV+   
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK-MEDASKIFSMMREMKDVVS 349
              ++L    Q H++++K+G   + ++ +GL+  YSKCG  M D  K+F  +    D+V 
Sbjct: 251 TNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN-PDLVL 309

Query: 350 WTAMISGH-LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVHAHI 404
           W  MISG+ L     D A+  F Q+   G RP+  +   +++A   +S      QVH   
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369

Query: 405 IKTNYEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           +K +   +  SV  AL+  Y K G L +A  +F+ + E + V++++M+AGYAQ G    +
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQS 429

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK-QFHACSIKAKLNNALCVSSALV 522
           + +++++   G  P   TF SV+ AC A +  VE GK  F+    K  +       S ++
Sbjct: 430 LHLFQRMLEMGFTPTNITFISVLAAC-AHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMI 488

Query: 523 TMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
            +  + G +  A  + +          W++++     HG+ + A++    + + D
Sbjct: 489 DLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLD 543



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 188/397 (47%), Gaps = 36/397 (9%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF---- 338
           F   +K C   ++LR  + LH+  +K+ +     +    ++ YSKC ++  A ++F    
Sbjct: 11  FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70

Query: 339 ------------------------SMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
                                    +  EM   D VS+  +I+ + + G    A   F +
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           M    +  +GFT S I+TA         Q+HA  + T  +   SVG AL+ +Y K G L 
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLK 190

Query: 431 EAAKVFELIDE-KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           EA ++F  + E +D V+W++M+  Y Q  +   A+++Y ++T  G+  + FT +SV+ A 
Sbjct: 191 EARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAF 250

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN-IESASEVFKRQRKRDLVS 548
           T     +  G QFHA  IK+  +    V S L+ +YSK G  +    +VF      DLV 
Sbjct: 251 TNVQDLL-GGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVL 309

Query: 549 WNSMICGYAQHGH-TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           WN+MI GY+ +   + +ALE F++++      D  + + VI+AC++     +G+Q   + 
Sbjct: 310 WNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLA 369

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           +        +   + ++ +YS+ G L  A  + + MP
Sbjct: 370 LKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMP 406


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/772 (30%), Positives = 417/772 (54%), Gaps = 76/772 (9%)

Query: 143  NVVSWTSLLSGYARNKMNDR-VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            N + W S +  +  +  +   VLE+F  +  +G+  +S  +S  L        +   +++
Sbjct: 637  NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 696

Query: 202  HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
            H  +IK G ++   +  AL++ Y +   +  A  VF  M + +++ WN  +   + +E  
Sbjct: 697  HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKL 756

Query: 262  MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
             +  E F  M  +  +   +T V V++ C     L  A+Q+H  V + G+D D ++   L
Sbjct: 757  QKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 816

Query: 322  MVAYSKCGKMEDASKIFSMMR---------------------------------EMK-DV 347
            +  YSK GK+E A ++F  M                                  +MK D+
Sbjct: 817  ISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDI 876

Query: 348  VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
            V+W  ++SGH  +G  +  +N   +M  EG +PN  + + +L A   +       + H +
Sbjct: 877  VTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGY 936

Query: 404  IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
            +++  ++    VGT+L++ YVK   L  A  VF+ +  ++I AW+++++GY+  G  E A
Sbjct: 937  VLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDA 996

Query: 464  VKIYRQLTSEGVKPNEFTFSSVINA-----CT----APSAA--------------VEQGK 500
            +++  Q+  EG+KP+  T++ +I+      C      P++A              +++GK
Sbjct: 997  LRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGK 1056

Query: 501  QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
            + H  SI+      + V++AL+ MYSK  ++++A +VF+R + + L SWN MI G+A  G
Sbjct: 1057 EIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFG 1116

Query: 561  HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
              K+A+ VF EM++  +  D ITF  +++AC ++GL+ EG +YFD M+ ++ I P +EHY
Sbjct: 1117 LGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHY 1176

Query: 621  SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQP 666
             CMVDL  RAG L++A D+I+ MP    AT+W  +L +CR              L  L+P
Sbjct: 1177 CCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEP 1236

Query: 667  HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            ++SA Y+L+ N+Y+    W++   +R+LM    V+    +SWI++  + + F + +  HP
Sbjct: 1237 NNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHP 1296

Query: 727  QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
             + +IY +L +L + +K  GY PD + V Q++D+  K+ IL  H+E+LAI +GL+   AG
Sbjct: 1297 DAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAG 1356

Query: 787  APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             P++++KN R+C DCH+  K IS ++ R++ +RD  RFHHF+EG CSC D+W
Sbjct: 1357 EPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 195/422 (46%), Gaps = 60/422 (14%)

Query: 29   KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
            +K   +F   P    + +N  +    +    Q+ + LF  ++   L    +T+  VL+ C
Sbjct: 726  EKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQAC 785

Query: 89   GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            G +      +Q+H    + G   DV++   L+ +Y +   +E  RRVFD M   N  SW 
Sbjct: 786  GKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWN 845

Query: 149  SLLSGYAR-NKMND----------------------------------RVLELFHRMQVE 173
            S++S YA    +ND                                   VL +  RMQ E
Sbjct: 846  SMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE 905

Query: 174  GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
            G KPNS + ++VL  +++ G +    + H  V++NG +    V  +LI MY+K+  +  A
Sbjct: 906  GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSA 965

Query: 234  RAVFDGMEDRDSITWNSMVAGY-----------VTNELHMEAFE----TFNNM--GLAGA 276
            +AVFD M++R+   WNS+V+GY           + N++  E  +    T+N M  G A  
Sbjct: 966  QAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMW 1025

Query: 277  ELTRSTFVS-------VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
               R  F+        +++ CA+   L+  +++H   ++NG   D  + T L+  YSK  
Sbjct: 1026 GCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSS 1085

Query: 330  KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
             +++A K+F  ++  K + SW  MI G    G    A++ F +M + GV P+  T++ +L
Sbjct: 1086 SLKNAHKVFRRIQN-KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALL 1144

Query: 390  TA 391
            +A
Sbjct: 1145 SA 1146


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/687 (35%), Positives = 383/687 (55%), Gaps = 54/687 (7%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---ARAVFDGMEDRDSITWNSMVAGYVT 257
           +H  +IK G        + LI   + S        A +VFD +++ + + WN+M  G+  
Sbjct: 21  IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +   + A   +  M   G      TF  ++K CA +K  R  +Q+H  VLK G D D  +
Sbjct: 81  SSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYV 140

Query: 318 RTGLMVAYSKCGKMEDASKIFS----------------------------MMREM--KDV 347
            T L+  Y K G+ EDA K+F                             M  E+  KDV
Sbjct: 141 HTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDV 200

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           VSW A+ISG+ + G    A+  F +M +  V+P+  T   +L+A    +      QVH+ 
Sbjct: 201 VSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSW 260

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I    +  +  +  AL++ Y+K G ++ A+ +FE +  KD+++W+ ++ GY  +   + A
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK--AKLNNALCVSSAL 521
           + +++++   G  PNE T  S++ AC A   A++ G+  H    K    ++N   + ++L
Sbjct: 321 LLLFQEMLRSGESPNEVTMLSILPAC-AHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSL 379

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + MY+K G+IE+A +VF     R L SWN+MI G+A HG    A ++F  MR+  +E D 
Sbjct: 380 IDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDD 439

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           ITF+G+++AC+H+G++D G+  F  M  ++ I P +EHY CM+DL   +G+ ++A ++IN
Sbjct: 440 ITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 499

Query: 642 RMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQE 687
            M       +W ++L AC+              LI ++P +S  YVLLSN+YA  G W E
Sbjct: 500 SMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNE 559

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
            A+ R L+ND+ +KK  G S IE+ +  + F+ GD  HP++ +IY  LEE+   L++AG+
Sbjct: 560 VAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEAGF 619

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            PDTS VLQ++++E KE  L  HSE+LAIAFGL++T  G  L IVKNLRVC +CH   KL
Sbjct: 620 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 679

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSC 834
           ISK+ +R+I+ RD  RFHHF +G+CSC
Sbjct: 680 ISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 214/469 (45%), Gaps = 42/469 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+FD   + N + +N +   +   S    AL L++ +  LGL     T   +LK C    
Sbjct: 58  SVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSK 117

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--------------- 137
               G+Q+H   +K G   D+ V TSL+ +Y++    ED R+VFD               
Sbjct: 118 AFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIK 177

Query: 138 ----------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                           ++   +VVSW +L+SGYA        LELF  M    +KP+  T
Sbjct: 178 GYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDEST 237

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             TVL   A    +    QVH+ +  +G      + NALI +Y+K   V  A  +F+G+ 
Sbjct: 238 MVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLS 297

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN+++ GY    L+ EA   F  M  +G      T +S++  CA    + + R 
Sbjct: 298 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRW 357

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    ++RT L+  Y+KCG +E A ++F  M   + + SW AMI G   
Sbjct: 358 IHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLN-RSLSSWNAMIFGFAM 416

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL 419
           +G  + A + F +M ++G+ P+  T+  +L+A        +  HI ++  E  + +   L
Sbjct: 417 HGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTE-DYKITPKL 475

Query: 420 ------LNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
                 ++     G+  EA ++   ++ + D V W ++L      G+ E
Sbjct: 476 EHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVE 524



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 162/353 (45%), Gaps = 3/353 (0%)

Query: 20  KSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           K   S  Y    Q +FD  P ++ V +N L+  Y     ++EAL LF  + +  +    S
Sbjct: 177 KGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDES 236

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T+ +VL  C        GRQVH      GF  ++ +  +L+DLY++   VE    +F+ +
Sbjct: 237 TMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGL 296

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +  +V+SW +L+ GY    +    L LF  M   G  PN  T  ++L   A  G +    
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGR 356

Query: 200 QVHTMVIK--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
            +H  + K   G    +S+  +LI MY K   +  A+ VFD M +R   +WN+M+ G+  
Sbjct: 357 WIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +     AF+ F+ M   G E    TFV ++  C+ +  L L R +   + ++        
Sbjct: 417 HGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLE 476

Query: 318 RTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
             G M+      G  ++A ++ + M    D V W +++     +G ++L  +F
Sbjct: 477 HYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESF 529


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/619 (38%), Positives = 354/619 (57%), Gaps = 46/619 (7%)

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R +FD + D++ + +N M+  YV N L+ +A   F  M   G      T+  V+K C+ +
Sbjct: 91  RHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVS 150

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L +  Q+H  V+K G+D +  I  GL+  Y KC  ++ A ++   M   +D+VSW +M
Sbjct: 151 GNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPG-RDMVSWNSM 209

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF 413
           ++G+ QNG  + A+    +M    ++P+  T   +L   PAV+               + 
Sbjct: 210 VAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLL---PAVT---------------NT 251

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           S    L   YVK         +F  + EK +++W+ M+A Y        AV +Y Q+   
Sbjct: 252 SCDNVL---YVKD--------MFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVH 300

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           GV+P+  + SSV+ AC   SAAV  G++ H    + KL   L + +AL+ MY+K G ++ 
Sbjct: 301 GVEPDAVSISSVLPACGDLSAAV-LGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKE 359

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A  VF +   RD+VSW SMI  Y   G  K A+ +FK+MR      D I F+ V+ AC+H
Sbjct: 360 ARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSH 419

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
           AGLVDEG+  F++M  E+ I P +EHY+CMVDL  RAG +++A  +  +MP   +  VW 
Sbjct: 420 AGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWG 478

Query: 654 TVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           ++L+ACR              L  L P  S  YVLLSN+YA  G WQ+   VR +MN + 
Sbjct: 479 SLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKG 538

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           +KK  G S +E+ +  Y+FLAGD SH QS +IY  L  L  R+K+ GY P+T   L D++
Sbjct: 539 IKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVE 598

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           +E KE  L+ HSE+LAI F ++ T  G+ ++I KN+RVCGDCH   KLISK+  R+I++R
Sbjct: 599 EEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIR 658

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           DT+RFHHF++G+CSCGDYW
Sbjct: 659 DTHRFHHFRDGVCSCGDYW 677



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 196/414 (47%), Gaps = 43/414 (10%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           R +FD++ + NVV +  ++  Y  N +    L +F  M  +G  P+++T+  VL   +  
Sbjct: 91  RHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVS 150

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           G +   +Q+H  V+K G ++   + N L+SMY K K +  AR V D M  RD ++WNSMV
Sbjct: 151 GNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMV 210

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           AGY  N                        F   +KLC   ++L+L              
Sbjct: 211 AGYAQN----------------------GRFNDALKLCREMEDLKLKP------------ 236

Query: 313 FDHNIRTGLM--VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
            D      L+  V  + C  +     +F  ++E K ++SW  MI+ ++ N   + AV+ +
Sbjct: 237 -DAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKE-KSLISWNVMIAVYVNNAMPNEAVDLY 294

Query: 371 CQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            QM   GV P+  + S +L A      AV   ++H ++ +     +  +  AL++ Y K 
Sbjct: 295 LQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKC 354

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G L EA  VF+ +  +D+V+W++M++ Y   G  + AV +++++   G  P+   F SV+
Sbjct: 355 GCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVL 414

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
            AC+  +  V++G+       +  +   +   + +V +  + G I+ A  + ++
Sbjct: 415 AACSH-AGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQ 467



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 210/474 (44%), Gaps = 75/474 (15%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           P Y++    +FD    +N V +N ++  Y  + L+Q+AL +F  +   G      T   V
Sbjct: 87  PCYTRH---IFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCV 143

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           LK C    +   G Q+H   VK G   ++ +   LV +Y +   ++  RRV D+M   ++
Sbjct: 144 LKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDM 203

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSW S+++GYA+N   +  L+L   M+   +KP++ T  ++L  + +             
Sbjct: 204 VSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN------------- 250

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
                    TS  N L   Y+K   V+        ++++  I+WN M+A YV N +  EA
Sbjct: 251 ---------TSCDNVL---YVKDMFVK--------LKEKSLISWNVMIAVYVNNAMPNEA 290

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            + +  M + G E    +  SV+  C       L R++H  V +  +  +  +   L+  
Sbjct: 291 VDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDM 350

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y+KCG +++A  +F  M   +DVVSWT+MIS +  +G    AV  F +M   G  P+   
Sbjct: 351 YAKCGCLKEARAVFDQMM-FRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIA 409

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           +  +L A         HA                        G++DE    F L+ E  I
Sbjct: 410 FVSVLAACS-------HA------------------------GLVDEGRYCFNLMAEYGI 438

Query: 445 VA----WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
                 ++ M+    + G  + A  + RQ+  E   PNE  + S+++AC   S+
Sbjct: 439 TPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPME---PNERVWGSLLSACRVYSS 489



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 15/280 (5%)

Query: 388 ILTAQPAVSPFQ-VHAHI-IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           IL   P     + +H+ I I  N   + S+G  L+ AY   G       +F+ I +K++V
Sbjct: 44  ILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVV 103

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            ++ M+  Y   G  + A+ +++ + ++G  P+ +T+  V+ AC+  S  +  G Q H  
Sbjct: 104 FFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSV-SGNLWVGLQIHGA 162

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            +K  L+  L + + LV+MY K   +++A  V      RD+VSWNSM+ GYAQ+G    A
Sbjct: 163 VVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDA 222

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           L++ +EM    L+ D  T   ++ A T+    D      D+ V       ++  ++ M+ 
Sbjct: 223 LKLCREMEDLKLKPDAGTMGSLLPAVTNTS-CDNVLYVKDMFVKLKE--KSLISWNVMIA 279

Query: 626 LYSRAGMLEKAMDIINRM------PFAASATVWRTVLAAC 659
           +Y    M  +A+D+  +M      P A S +   +VL AC
Sbjct: 280 VYVNNAMPNEAVDLYLQMQVHGVEPDAVSIS---SVLPAC 316



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 26/187 (13%)

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+  Y+  G       +F     +++V +N MI  Y  +G  + AL VFK M  Q    D
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKAMD 638
             T+  V+ AC+ +G +  G Q    +V    +   M  Y  + +V +Y +   L+ A  
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVK---LGLDMNLYIGNGLVSMYGKCKWLDAARR 193

Query: 639 IINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
           +++ MP       W +++A                     YA  G + +  ++ + M D 
Sbjct: 194 VLDEMP-GRDMVSWNSMVAG--------------------YAQNGRFNDALKLCREMEDL 232

Query: 699 KVKKEAG 705
           K+K +AG
Sbjct: 233 KLKPDAG 239


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/658 (37%), Positives = 373/658 (56%), Gaps = 54/658 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL-TRSTFVSVIKLCA 291
           AR +FD +   +  TWN+++  Y ++    ++F  F ++     +L  + TF  VIK  +
Sbjct: 78  ARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAAS 137

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
             K  R+   +H   +K     D  I   L+  Y  CG +  A ++F  +   KDVVSW 
Sbjct: 138 ELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGI-SCKDVVSWN 196

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
           +MIS   Q    + A+  F +M RE V PN  T   +L+A       +    V ++I + 
Sbjct: 197 SMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK 256

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA---- 463
             +   ++  A+L+ Y K G +D+A K+F+ + E+D+ +W+ ML GYA++GD + A    
Sbjct: 257 GIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVF 316

Query: 464 ---------------------------VKIYRQLT-SEGVKPNEFTFSSVINACTAPSAA 495
                                      + I+ +L  S+  KP+E T  S ++AC A   A
Sbjct: 317 NAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSAC-AQLGA 375

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++ G   H    +  +     + S+LV MY+K G++E A EVF    +RD+  W++MI G
Sbjct: 376 IDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAG 435

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
              HG  K A+++F EM+   ++ + +TF  V+ AC+HAGLVDEG+ +F  M   + + P
Sbjct: 436 LGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVP 495

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RL 661
            M+HY+CMVD+  RAG LE+AM++IN M    SA+VW  +L AC              +L
Sbjct: 496 EMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQL 555

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + L+P +    VLLSN+YA TG W++ + +RKLM D ++KKE G S IE     + FL G
Sbjct: 556 LKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVG 615

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI-DDEHKEAILSQHSERLAIAFGL 780
           D +HP S+ IYSKLEE++T+LK  GY+P+ S++LQ I +D+ KE  LS HSE+LAIAFGL
Sbjct: 616 DNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGL 675

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           V      P+++VKNLR+CGDCH   KL+S++  RDI++RD  RFHHF++G CSC DYW
Sbjct: 676 VTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 247/549 (44%), Gaps = 67/549 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI--RRLGLPLFGSTLSSVLKTCG 89
           ++LFD+ PQ N   +N L+  Y   S   ++  +FL +  +   LP    T   V+K   
Sbjct: 79  RNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLP-NKFTFPFVIKAAS 137

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G  VH   +K  F  D+ +  SLV  Y    ++    R+F  ++  +VVSW S
Sbjct: 138 ELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNS 197

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++S +A+    +  LELF +M+ E + PNS T   VL   A +  +     V + + + G
Sbjct: 198 MISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKG 257

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY-----------VTN 258
            +V  ++CNA++ MY K   V DA+ +FD M +RD  +W  M+ GY           V N
Sbjct: 258 IKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFN 317

Query: 259 ELHM--------------------EAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELR 297
            + +                    EA   FN + L+  A+    T VS +  CA    + 
Sbjct: 318 AMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAID 377

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L   +H  + + GI  + ++ + L+  Y+KCG +E A ++F  + E +DV  W+AMI+G 
Sbjct: 378 LGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEE-RDVYVWSAMIAGL 436

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT 417
             +G    A++ F +M    V+PN  T++ +L A         HA ++            
Sbjct: 437 GMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACS-------HAGLVDEG--------- 480

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
                   +    E   V+ ++ E  +  ++ M+    + G  E A+++  ++++    P
Sbjct: 481 --------RVFFHEMEPVYGVVPE--MKHYACMVDILGRAGFLEEAMELINEMST---TP 527

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           +   + +++ AC+     VE G+      +K +  N   +   L  +Y+K G  E  SE+
Sbjct: 528 SASVWGALLGACSL-HMNVELGELASDQLLKLEPRNHGAI-VLLSNIYAKTGRWEKVSEL 585

Query: 538 FKRQRKRDL 546
            K  R  +L
Sbjct: 586 RKLMRDTEL 594


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/737 (34%), Positives = 394/737 (53%), Gaps = 97/737 (13%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMY---LKSKMVRDARAVFDGMEDRDSITWNSM 251
           ++ A Q H ++++      T +  +L+S Y   L     + +  +   +      +++S+
Sbjct: 16  LSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSL 75

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLKN 309
           +  +  +        TF++  L    L    F+  S IK CA+ + L   +QLH+    +
Sbjct: 76  IHAFARSHHFPHVLTTFSH--LHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAAS 133

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ---------- 359
           G   D  + + L   Y KC ++ DA K+F  M + +DVV W+AMI+G+ +          
Sbjct: 134 GFLTDSIVASSLTHMYLKCDRILDARKLFDRMPD-RDVVVWSAMIAGYSRLGLVEEAKEL 192

Query: 360 -------------------------NGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--- 391
                                    NG  D AV  F  M  +G  P+G T S +L A   
Sbjct: 193 FGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGC 252

Query: 392 -QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI------ 444
            +  V   QVH ++IK        V +A+L+ Y K G + E ++VF+ ++E +I      
Sbjct: 253 LEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAF 312

Query: 445 -----------------------------VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
                                        V W++++A  +Q G    A++++R + + GV
Sbjct: 313 LTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGV 372

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
           +PN  T  S+I AC   SA +  GK+ H  S++  + + + V SAL+ MY+K G I+ A 
Sbjct: 373 EPNAVTIPSLIPACGNISALM-HGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLAR 431

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
             F +    +LVSWN+++ GYA HG  K+ +E+F  M +   + D +TF  V++AC   G
Sbjct: 432 RCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNG 491

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
           L +EG + ++ M  EH I P MEHY+C+V L SR G LE+A  II  MPF   A VW  +
Sbjct: 492 LTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGAL 551

Query: 656 LAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
           L++CR              L  L+P +   Y+LLSN+YA+ G W E  R+R++M  + ++
Sbjct: 552 LSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLR 611

Query: 702 KEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE 761
           K  GYSWIEV +K +  LAGD SHPQ   I  KL++L+ ++K +GY P T++VLQD++++
Sbjct: 612 KNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQ 671

Query: 762 HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
            KE IL  HSE+LA+  GL+ T  G PLQ++KNLR+C DCH VIK+IS+LE R+I VRDT
Sbjct: 672 DKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDT 731

Query: 822 NRFHHFKEGLCSCGDYW 838
           NRFHHFK+G+CSCGD+W
Sbjct: 732 NRFHHFKDGVCSCGDFW 748



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/538 (23%), Positives = 229/538 (42%), Gaps = 85/538 (15%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLY---MRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            RQ H   ++     D  ++TSL+  Y   +  +  +    +   +    + S++SL+  
Sbjct: 19  ARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHA 78

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +AR+     VL  F  +    + P++F   + +   A    +    Q+H     +G    
Sbjct: 79  FARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTD 138

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           + V ++L  MYLK   + DAR +FD M DRD + W++M+AGY    L  EA E F  M  
Sbjct: 139 SIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRS 198

Query: 274 AGAELT-----------------------------------RSTFVSVIKLCATTKELRL 298
            G E                                      ST   V+      +++ +
Sbjct: 199 GGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVV 258

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK------------- 345
             Q+H  V+K G+  D  + + ++  Y KCG +++ S++F  + EM+             
Sbjct: 259 GAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSR 318

Query: 346 ---------------------DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
                                +VV+WT++I+   QNG    A+  F  M   GV PN  T
Sbjct: 319 NGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVT 378

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
              ++ A   +S      ++H   ++        VG+AL++ Y K G +  A + F+ + 
Sbjct: 379 IPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMS 438

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             ++V+W+A++ GYA  G  +  ++++  +   G KP+  TF+ V++AC       E  +
Sbjct: 439 ALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWR 498

Query: 501 QFHACS----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
            +++ S    I+ K+ +  C    LVT+ S+ G +E A  + K    + D   W +++
Sbjct: 499 CYNSMSEEHGIEPKMEHYAC----LVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALL 552



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 206/494 (41%), Gaps = 85/494 (17%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P      ++ L+  + R       L  F  +  L L      L S +K+C  L     G+
Sbjct: 65  PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H     SGF  D  V++SL  +Y++ + + D R++FD M + +VV W+++++GY+R  
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI------------------------ 194
           + +   ELF  M+  G++PN  +++ +L    + G                         
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244

Query: 195 -----------VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
                      V    QVH  VIK G      V +A++ MY K   V++   VFD +E+ 
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304

Query: 244 D-----------------------------------SITWNSMVAGYVTNELHMEAFETF 268
           +                                    +TW S++A    N   +EA E F
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELF 364

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            +M   G E    T  S+I  C     L   +++H   L+ GI  D  + + L+  Y+KC
Sbjct: 365 RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKC 424

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G+++ A + F  M  + ++VSW A++ G+  +G     +  F  M + G +P+  T++ +
Sbjct: 425 GRIQLARRCFDKMSAL-NLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCV 483

Query: 389 LT--AQPAVSP-------FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-EL 438
           L+  AQ  ++             H I+   E        L+    + G L+EA  +  E+
Sbjct: 484 LSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHY----ACLVTLLSRVGKLEEAYSIIKEM 539

Query: 439 IDEKDIVAWSAMLA 452
             E D   W A+L+
Sbjct: 540 PFEPDACVWGALLS 553



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 41/379 (10%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           + N V +N +L  +  +  + EA+ +F  +   G    GST+S VL   GCL D V G Q
Sbjct: 202 EPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQ 261

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES----------------- 142
           VH   +K G   D  V ++++D+Y +   V++  RVFD++ E                  
Sbjct: 262 VHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGM 321

Query: 143 ------------------NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
                             NVV+WTS+++  ++N  +   LELF  MQ  G++PN+ T  +
Sbjct: 322 VDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPS 381

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           ++    +   +    ++H   ++ G      V +ALI MY K   ++ AR  FD M   +
Sbjct: 382 LIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALN 441

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA-RQLH 303
            ++WN+++ GY  +    E  E F+ M  +G +    TF  V+  CA         R  +
Sbjct: 442 LVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYN 501

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG-----HL 358
           S   ++GI+        L+   S+ GK+E+A  I   M    D   W A++S      +L
Sbjct: 502 SMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNL 561

Query: 359 QNGAIDLAVNFFCQMTREG 377
             G I     FF + T  G
Sbjct: 562 SLGEIAAEKLFFLEPTNPG 580



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 113/220 (51%), Gaps = 2/220 (0%)

Query: 36  DRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV 95
           D+  + N V +  ++    ++    EAL LF  ++  G+     T+ S++  CG +   +
Sbjct: 334 DQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALM 393

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G+++HC  ++ G   DV V ++L+D+Y +   ++  RR FD M+  N+VSW +++ GYA
Sbjct: 394 HGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYA 453

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGGEVVT 214
            +      +E+FH M   G KP+  TF+ VL   A  G+     + + +M  ++G E   
Sbjct: 454 MHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKM 513

Query: 215 SVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
                L+++  +   + +A ++   M  + D+  W ++++
Sbjct: 514 EHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLS 553


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/703 (33%), Positives = 390/703 (55%), Gaps = 69/703 (9%)

Query: 201  VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
            +H  +IKNG   V    N L+++Y KS+ +  A  +F+ +   D  +W  +++G+    L
Sbjct: 310  LHAKLIKNG--CVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367

Query: 261  HMEAFETFNNMGLAGAELTRSTFVSVIKLCAT-TKELRLARQLHSQVLKNGIDFDHNIRT 319
              +    F  M   G    + T   V+K C++   + R+ + +H  +L+NG+D D  +  
Sbjct: 368  SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427

Query: 320  GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ------- 372
             ++  Y KC     A K+F +M E KD VSW  M+S +LQ G +  +V+ F Q       
Sbjct: 428  SILDYYVKCRCFGYAEKLFGLMAE-KDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAA 486

Query: 373  ------------------------MTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
                                    M   G   N  T+SI L    ++S      Q+H  +
Sbjct: 487  SWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQV 546

Query: 405  IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK---------------DIVAWSA 449
            +K        V  +L++ Y K G +++A+ +F+ + ++               + V+WS+
Sbjct: 547  LKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSS 606

Query: 450  MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            M++GY Q G  E A+K +  +    V+ ++FT +SV++AC A +  +E G+Q H    K 
Sbjct: 607  MVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSAC-ASAGVLELGRQVHGYIQKI 665

Query: 510  KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
                 + + S+++ MY K G++  A  +F + + R++V W SMI G A HG  ++A+ +F
Sbjct: 666  GHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLF 725

Query: 570  KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            + M  + +  + ++F+GV+TAC+HAGL++EG +YF +M   + I P  EH++CMVDLY R
Sbjct: 726  ELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGR 785

Query: 630  AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
            AG L +  + I+    +  ++VWR+ L++CR              L+ L+P D+  Y+L 
Sbjct: 786  AGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILF 845

Query: 676  SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
            S++ A    W+E A++R LM  R VKK    SWI++KN+ +SF+ GD SHPQ  +IYS L
Sbjct: 846  SSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYL 905

Query: 736  EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
            +EL  RLK+ GY  D + V+QD++ E ++ +L  HSE+LAIA+G+++T  G P++++KNL
Sbjct: 906  DELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNL 965

Query: 796  RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            RVC DCH  IK  S+L  R+I++RD +RFHHFK G CSC DYW
Sbjct: 966  RVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/583 (26%), Positives = 273/583 (46%), Gaps = 72/583 (12%)

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVFGRQ--------VHCECVKSGFARDVNV-STSLVDLY 123
           GL   G +LSS        F   F           +H + +K+G    V +    L++LY
Sbjct: 275 GLLFLGFSLSSYFYPPLXYFSSTFSDSMNYPNSEVLHAKLIKNGC---VGIRGNHLLNLY 331

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
            ++ N+E   ++F+++ +++V SWT L+SG+AR  ++  VL LF +MQ +G+ PN FT S
Sbjct: 332 AKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLS 391

Query: 184 TVL-GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
            VL    ++         +H  +++NG ++   + N+++  Y+K +    A  +F  M +
Sbjct: 392 IVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAE 451

Query: 243 RDSI-------------------------------TWNSMVAGYVTNELHMEAFETFNNM 271
           +D++                               +WN+M+ G + N     A E    M
Sbjct: 452 KDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKM 511

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             AG    + TF   + L ++   L L +Q+H+QVLK G+  D  +R  L+  Y KCG+M
Sbjct: 512 VAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEM 571

Query: 332 EDASKIF-------SMMRE-------MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
           E AS IF       SMM         + + VSW++M+SG++QNG  + A+  F  M    
Sbjct: 572 EKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQ 631

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           V  + FT + +++A  +        QVH +I K  +     +G+++++ YVK G L++A 
Sbjct: 632 VEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAW 691

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            +F    ++++V W++M++G A  G    AV+++  + +EG+ PNE +F  V+ AC+   
Sbjct: 692 LIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAG 751

Query: 494 AAVEQGKQF----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS- 548
              E  K F        I+    +  C    +V +Y + G +    E         L S 
Sbjct: 752 LLEEGCKYFRLMREVYGIRPGAEHFTC----MVDLYGRAGRLNEIKEFIHNNAISKLSSV 807

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           W S +     H + +  + V K++   +  FD   +I   + C
Sbjct: 808 WRSFLSSCRVHKNIEMGIWVCKKLLELE-PFDAGPYILFSSIC 849



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 188/410 (45%), Gaps = 48/410 (11%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++   +F+  PQ +   +  L+  + R  L  + L LF  ++  G+     TLS VLK+C
Sbjct: 338 EQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSC 397

Query: 89  GC-LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              + D   G+ +H   +++G   D  ++ S++D Y++        ++F  M E + VSW
Sbjct: 398 SSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSW 457

Query: 148 TSLLSGY-------------------------------ARNKMNDRVLELFHRMQVEGIK 176
             ++S Y                                RN      LEL ++M   G  
Sbjct: 458 NIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPA 517

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
            N  TFS  L + +   ++    Q+HT V+K G      V N+LI MY K   +  A  +
Sbjct: 518 FNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVI 577

Query: 237 FDGMEDR---------------DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           F  +                  +S++W+SMV+GYV N    +A +TF+ M  +  E+ + 
Sbjct: 578 FKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKF 637

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T  SV+  CA+   L L RQ+H  + K G   D  + + ++  Y KCG + DA  IF+  
Sbjct: 638 TLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQA 697

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           ++ ++VV WT+MISG   +G    AV  F  M  EG+ PN  ++  +LTA
Sbjct: 698 KD-RNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTA 746



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 22/297 (7%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K   LF + P ++   +N ++    R+   + AL L   +   G      T S  L   
Sbjct: 471 QKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLA 530

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNV--- 144
             L     G+Q+H + +K G   D  V  SL+D+Y +   +E    +F  +  ES++   
Sbjct: 531 SSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNS 590

Query: 145 -----------VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
                      VSW+S++SGY +N   +  L+ F  M    ++ + FT ++V+   A  G
Sbjct: 591 EESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAG 650

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
           ++    QVH  + K G  +   + +++I MY+K   + DA  +F+  +DR+ + W SM++
Sbjct: 651 VLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMIS 710

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA-------TTKELRLARQLH 303
           G   +    EA   F  M   G      +FV V+  C+         K  RL R+++
Sbjct: 711 GCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVY 767


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/588 (37%), Positives = 357/588 (60%), Gaps = 21/588 (3%)

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + M L GA      + + I  C   + L   RQ+H++++         + T L+  Y +C
Sbjct: 31  SGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRC 90

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++DA  +   M E + VVSWT MISG+ Q      A++ F +M R G  PN +T + +
Sbjct: 91  GALDDARNVLDRMPE-RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATV 149

Query: 389 LTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           LT+    Q      QVH+ ++KTN+E    VG++LL+ Y K   + EA +VF+ + E+D+
Sbjct: 150 LTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDV 209

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+ +A+++GYAQ G  E A+ ++RQL SEG++ N  TF++++ A +   A+++ GKQ HA
Sbjct: 210 VSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSG-LASLDYGKQVHA 268

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             ++ +L   + + ++L+ MYSK G +  +  VF    +R +VSWN+M+ GY +HG   +
Sbjct: 269 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 328

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
            + +FK++ ++ ++ D +T + V++ C+H GLVDEG   FD +V E        HY C++
Sbjct: 329 VISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCII 387

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           DL  R+G LEKA+++I  MPF ++ ++W ++L ACR              L+ ++P ++ 
Sbjct: 388 DLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAG 447

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YV+LSN+YAA G W++  +VRKLM ++ V KE G SWI +    ++F + +  HP    
Sbjct: 448 NYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKD 507

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           I +K++E+   +K AG+ PD S VL D+DDE KE +L  HSE+LAI FGL+ TP G  ++
Sbjct: 508 INAKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIR 567

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++KNLR+C DCH   K +SK+  R+I +RD NRFH    G C+CGDYW
Sbjct: 568 VMKNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 166/295 (56%), Gaps = 2/295 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GRQVH   + + +   V + T LV +Y+R   ++D R V D M E +VVSWT+++SGY++
Sbjct: 61  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 120

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
            + +   L+LF +M   G  PN +T +TVL   +    +    QVH++++K   E    V
Sbjct: 121 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 180

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY KS+ +++AR VFD + +RD ++  ++++GY    L  EA + F  +   G 
Sbjct: 181 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 240

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    TF +++   +    L   +Q+H+ +L+  + F   ++  L+  YSKCGK+  + +
Sbjct: 241 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 300

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +F  M E + VVSW AM+ G+ ++G     ++ F  + +E V+P+  T   +L+ 
Sbjct: 301 VFDNMLE-RSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSG 353



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 141/240 (58%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++ DR P+R+ V +  ++  Y +   H EAL+LF+ + R G      TL++VL +C   
Sbjct: 97  RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 156

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+QVH   VK+ F   + V +SL+D+Y ++ N+++ RRVFD + E +VVS T+++
Sbjct: 157 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 216

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+  +++  L+LF ++  EG++ N  TF+T++  L+    +    QVH ++++    
Sbjct: 217 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 276

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              ++ N+LI MY K   +  +R VFD M +R  ++WN+M+ GY  + L  E    F ++
Sbjct: 277 FFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL 336



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 5/229 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ + +FD  P+R+ V    ++  Y +  L +EAL+LF  +   G+     T ++++   
Sbjct: 195 QEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTAL 254

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L    +G+QVH   ++      V +  SL+D+Y +   +   RRVFD+M E +VVSW 
Sbjct: 255 SGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWN 314

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++L GY R+ +   V+ LF  +  E +KP+S T   VL   +  G+V   + +   V+K 
Sbjct: 315 AMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE 373

Query: 209 GGEVV-TSVCNALISMYLKSKMVRDARAVFDGM--EDRDSITWNSMVAG 254
              ++ T     +I +  +S  +  A  + + M  E   SI W S++  
Sbjct: 374 QSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSI-WGSLLGA 421


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/738 (34%), Positives = 396/738 (53%), Gaps = 41/738 (5%)

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
            R+VFD +   +  ++ +L+  Y+        ++L+  M    + PN +TF  VL   + 
Sbjct: 53  ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
              +     +H      G      V  ALI +Y++      AR VF  M  RD + WN+M
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172

Query: 252 VAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           +AGY  + ++  A     +M    G     ST VS++ L A    L     +H+  L+  
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRAC 232

Query: 311 IDFDHN---IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           ++ +     I T L+  Y+KC ++  A ++F  M  +++ V+W+A+I G +    +  A 
Sbjct: 233 LEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGM-PVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------------QVHAHIIKTNYEKSFS 414
           N F  M  EG+          L+A    S               Q+HA I K+      +
Sbjct: 292 NLFKDMLVEGL--------CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT 343

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
              +LL+ Y K G+++EA   F+ I  KD +++ A+L+G  Q G  E A  +++++ +  
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           ++P+  T  S+I AC+   AA++ GK  H   I   L     + ++L+ MY+K G I+ +
Sbjct: 404 MEPDIATMVSLIPACSH-LAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            +VF +   RD+VSWN+MI GY  HG  K+A  +F  M+ Q    D +TFI +I AC+H+
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           GLV EG+ +FD M +++ I P MEHY CMVDL +R G+L++A   I  MP  A   VW  
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582

Query: 655 VLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
           +L ACR+                L P  +  +VLLSN+++A G + E A VR +   +  
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 642

Query: 701 KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           KK  GYSWIE+    ++F+ GD SHP S  IY +L+ +   +K  GY+ DTS+VLQD+++
Sbjct: 643 KKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEE 702

Query: 761 EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 820
           E KE  L  HSE+LAIAFG+++      + + KNLRVCGDCHT IK ++ +  R I+VRD
Sbjct: 703 EEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 762

Query: 821 TNRFHHFKEGLCSCGDYW 838
           TNRFHHFK G CSCG++W
Sbjct: 763 TNRFHHFKNGQCSCGNFW 780



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 289/586 (49%), Gaps = 22/586 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR P  +   YN L+  Y        A++L+  + R  +     T   VLK C  L
Sbjct: 54  RQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSAL 113

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR +H     +G   D+ VST+L+DLY+R       R VF  M   +VV+W ++L
Sbjct: 114 VDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAML 173

Query: 152 SGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK--- 207
           +GYA + M    +     MQ   G++PN+ T  ++L +LA  G +     +H   ++   
Sbjct: 174 AGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACL 233

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E    +  AL+ MY K K +  A  VF GM  R+ +TW++++ G+V  +   EAF  
Sbjct: 234 EQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNL 293

Query: 268 FNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           F +M + G   L+ ++  S +++CA+  +L +  QLH+ + K+GI  D      L+  Y+
Sbjct: 294 FKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYA 353

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G + +A+  F  +  +KD +S+ A++SG +QNG  + A   F +M    + P+  T  
Sbjct: 354 KAGLINEATMFFDEI-AVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMV 412

Query: 387 IILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            ++ A   ++  Q     H  +I        S+  +L++ Y K G +D + +VF+ +  +
Sbjct: 413 SLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR 472

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+V+W+ M+AGY   G  + A  ++  + ++G  P++ TF  +I AC+  S  V +GK +
Sbjct: 473 DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH-SGLVTEGKHW 531

Query: 503 -----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGY 556
                H   I  ++ + +C    +V + ++ G ++ A +  +    K D+  W +++   
Sbjct: 532 FDTMTHKYGILPRMEHYIC----MVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
             H +     +V + +++   E  G  F+ +    + AG  DE  +
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLSNIFSAAGRFDEAAE 632



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 13/246 (5%)

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           L  ++ +G L  A +VF+ I   D  A++A++  Y+ +G    A+ +YR +    V PN+
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           +TF  V+ AC+A    +  G+  HA +  A L+  L VS+AL+ +Y +      A  VF 
Sbjct: 101 YTFPFVLKACSA-LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVD 598
           +   RD+V+WN+M+ GYA HG    A+    +M+    L  +  T + ++      G + 
Sbjct: 160 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALF 219

Query: 599 EGQQYFDIMV------NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           +G       +      NE  +       + ++D+Y++   L  A  + + MP     T W
Sbjct: 220 QGTSIHAYCLRACLEQNEEQVLIG----TALLDMYAKCKQLVYACRVFHGMPVRNDVT-W 274

Query: 653 RTVLAA 658
             ++  
Sbjct: 275 SALIGG 280


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/586 (38%), Positives = 356/586 (60%), Gaps = 21/586 (3%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L GA      + + I  C   + L   RQ+H++++         + T L+  Y +CG 
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA  +   M E + VVSWT MISG+ Q      A++ F +M R G  PN +T + +LT
Sbjct: 61  LDDARNVLDRMPE-RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLT 119

Query: 391 A----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +    Q      QVH+ ++KTN+E    VG++LL+ Y K   + EA +VF+ + E+D+V+
Sbjct: 120 SCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVS 179

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
            +A+++GYAQ G  E A+ ++RQL SEG++ N  TF++++ A +   A+++ GKQ HA  
Sbjct: 180 CTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSG-LASLDYGKQVHALI 238

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           ++ +L   + + ++L+ MYSK G +  +  VF    +R +VSWN+M+ GY +HG   + +
Sbjct: 239 LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVI 298

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +FK++ ++ ++ D +T + V++ C+H GLVDEG   FD +V E        HY C++DL
Sbjct: 299 SLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 357

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIY 672
             R+G LEKA+++I  MPF ++ ++W ++L ACR              L+ ++P ++  Y
Sbjct: 358 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNY 417

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           V+LSN+YAA G W++  +VRKLM ++ V KE G SWI +    ++F + +  HP    I 
Sbjct: 418 VILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDIN 477

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           +K++E+   +K AG+ PD S VL D+DDE KE +L  HSE+LAI FGL+ TP G  ++++
Sbjct: 478 AKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVM 537

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+C DCH   K +SK+  R+I +RD NRFH    G C+CGDYW
Sbjct: 538 KNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 166/295 (56%), Gaps = 2/295 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GRQVH   + + +   V + T LV +Y+R   ++D R V D M E +VVSWT+++SGY++
Sbjct: 29  GRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQ 88

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
            + +   L+LF +M   G  PN +T +TVL   +    +    QVH++++K   E    V
Sbjct: 89  TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 148

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY KS+ +++AR VFD + +RD ++  ++++GY    L  EA + F  +   G 
Sbjct: 149 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 208

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    TF +++   +    L   +Q+H+ +L+  + F   ++  L+  YSKCGK+  + +
Sbjct: 209 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRR 268

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +F  M E + VVSW AM+ G+ ++G     ++ F  + +E V+P+  T   +L+ 
Sbjct: 269 VFDNMLE-RSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSG 321



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 141/240 (58%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++ DR P+R+ V +  ++  Y +   H EAL+LF+ + R G      TL++VL +C   
Sbjct: 65  RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 124

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+QVH   VK+ F   + V +SL+D+Y ++ N+++ RRVFD + E +VVS T+++
Sbjct: 125 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 184

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA+  +++  L+LF ++  EG++ N  TF+T++  L+    +    QVH ++++    
Sbjct: 185 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 244

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              ++ N+LI MY K   +  +R VFD M +R  ++WN+M+ GY  + L  E    F ++
Sbjct: 245 FFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL 304



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 5/229 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ + +FD  P+R+ V    ++  Y +  L +EAL+LF  +   G+     T ++++   
Sbjct: 163 QEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTAL 222

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L    +G+QVH   ++      V +  SL+D+Y +   +   RRVFD+M E +VVSW 
Sbjct: 223 SGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWN 282

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++L GY R+ +   V+ LF  +  E +KP+S T   VL   +  G+V   + +   V+K 
Sbjct: 283 AMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKE 341

Query: 209 GGEVV-TSVCNALISMYLKSKMVRDARAVFDGM--EDRDSITWNSMVAG 254
              ++ T     +I +  +S  +  A  + + M  E   SI W S++  
Sbjct: 342 QSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPSI-WGSLLGA 389


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 243/625 (38%), Positives = 362/625 (57%), Gaps = 35/625 (5%)

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D  +WNS++A    +    EA   F++M       TRS+F   IK C++  ++   +Q H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
            Q    G   D  + + L+V YS CGK+EDA K+F  + + +++VSWT+MI G+  NG  
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMIRGYDLNGNA 158

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------------VHAHIIKTNYE 410
             AV+ F  +    V  N    ++ L +   VS                +H+ +IK  ++
Sbjct: 159 LDAVSLFKDLL---VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215

Query: 411 KSFSVGTALLNAYVK--KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +  SVG  LL+AY K  +G +  A K+F+ I +KD V+++++++ YAQ G +  A +++R
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 469 QLTSEGVKP-NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           +L    V   N  T S+V+ A  + S A+  GK  H   I+  L + + V ++++ MY K
Sbjct: 276 RLVKNKVVTFNAITLSTVLLA-VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +E+A + F R + +++ SW +MI GY  HGH  KALE+F  M    +  + ITF+ V
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           + AC+HAGL  EG ++F+ M     + P +EHY CMVDL  RAG L+KA D+I RM    
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
            + +W ++LAACR              L  L   +   Y+LLS++YA  G W++  RVR 
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
           +M +R + K  G+S +E+  + + FL GD  HPQ  +IY  L EL+ +L +AGY  +TS 
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
           V  D+D+E KE  L  HSE+LAIAFG++ T  G+ + +VKNLRVC DCH VIKLISK+  
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVD 634

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+ VVRD  RFHHFK+G CSCGDYW
Sbjct: 635 REFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 219/438 (50%), Gaps = 19/438 (4%)

Query: 33  SLFDRSPQRNFV-EYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +LF+R   +  V  +N ++ +  R     EAL  F  +R+L L    S+    +K C  L
Sbjct: 30  TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           FD   G+Q H +    G+  D+ VS++L+ +Y     +ED R+VFD++ + N+VSWTS++
Sbjct: 90  FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL----ADEGIVATAV--QVHTMV 205
            GY  N      + LF  + V+    +   F   +G++    A   + A  +   +H+ V
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 206 IKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
           IK G +   SV N L+  Y K     V  AR +FD + D+D +++NS+++ Y  + +  E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCAT-TKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           AFE F  +         +  +S + L  + +  LR+ + +H QV++ G++ D  + T ++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KCG++E A K F  M+  K+V SWTAMI+G+  +G    A+  F  M   GVRPN 
Sbjct: 330 DMYCKCGRVETARKAFDRMKN-KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL------LNAYVKKGILDEAAKVF 436
            T+  +L A  + +   V         +  F V   L      ++   + G L +A  + 
Sbjct: 389 ITFVSVLAA-CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447

Query: 437 ELIDEK-DIVAWSAMLAG 453
           + +  K D + WS++LA 
Sbjct: 448 QRMKMKPDSIIWSSLLAA 465



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 169/348 (48%), Gaps = 16/348 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI------RRLGLPLFGSTLSSVL 85
           + +FD  P+RN V +  ++  Y  +    +A++LF  +          + L    L SV+
Sbjct: 131 RKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR--TNNVEDGRRVFDDMNESN 143
             C  +        +H   +K GF R V+V  +L+D Y +     V   R++FD + + +
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
            VS+ S++S YA++ M++   E+F R+ + + +  N+ T STVL  ++  G +     +H
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             VI+ G E    V  ++I MY K   V  AR  FD M++++  +W +M+AGY  +    
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTK-ELRLARQLHSQVLKNGID--FDHNIRT 319
           +A E F  M  +G      TFVSV+  C+     +   R  ++   + G++   +H    
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH---Y 427

Query: 320 GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           G MV    + G ++ A  +   M+   D + W+++++    +  ++LA
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/673 (35%), Positives = 374/673 (55%), Gaps = 57/673 (8%)

Query: 184 TVLGVLADEGIVATA--VQVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDG 239
           TVL +   + I +     Q+H +V+++G      V  AL+  Y          A  VF  
Sbjct: 33  TVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSS 92

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           + + +   WN ++ G + N    +A   +  M +  A   + T+ ++ K C+  + ++  
Sbjct: 93  IPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEG 151

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           RQ+H  V+K+GI  D +I++  +  Y+  G++EDA K+F       DVV W  MI G+L+
Sbjct: 152 RQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGES--DVVCWNTMIDGYLK 209

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL 419
            G ++ A   F QM                   P                 K+      +
Sbjct: 210 CGVLEAAKGLFAQM-------------------PV----------------KNIGSWNVM 234

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           +N   K G L +A K+F+ + E+D ++WS+M+ GY   G  + A++I++Q+  E  +P  
Sbjct: 235 INGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGR 294

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           F  SSV+ AC+    A++QG+  HA   +  +     + +AL+ MY+K G ++   EVF+
Sbjct: 295 FILSSVLAACSN-IGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
             ++R++ +WN+MI G A HG  + ALE+F +++   ++ +GIT +GV+TAC HAG VD+
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G + F  M   + + P +EHY CMVDL  R+G+  +A D+IN MP   +A VW  +L AC
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGAC 473

Query: 660 R--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           R              L+ L+P +S  YVLLSN+YA  G + + +++RKLM DR +K   G
Sbjct: 474 RIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPG 533

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            S +++    + F  GD SHPQ  +IY KL+ +  RL+ AG+ PDTS VL DID+E KE 
Sbjct: 534 VSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKET 593

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
            ++ HSE+LAIAFGL+ T  G  + IVKNLRVC DCH+  KLIS++  R+I+VRD  R+H
Sbjct: 594 AVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYH 653

Query: 826 HFKEGLCSCGDYW 838
           HFK G CSC D+W
Sbjct: 654 HFKNGTCSCKDFW 666



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 181/415 (43%), Gaps = 80/415 (19%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T  ++ K C        GRQ+H   VK G   DV++ ++ + +Y     +ED R++F   
Sbjct: 134 TYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS- 192

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-ADEGIVATA 198
            ES+VV W +++ GY +                              GVL A +G+ A  
Sbjct: 193 GESDVVCWNTMIDGYLK-----------------------------CGVLEAAKGLFA-- 221

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
                M +KN G       N +I+   K   + DAR +FD M +RD I+W+SMV GY++ 
Sbjct: 222 ----QMPVKNIGS-----WNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISA 272

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
             + EA E F  M        R    SV+  C+    +   R +H+ + +N I  D  + 
Sbjct: 273 GRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG 332

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y+KCG+++   ++F  M+E +++ +W AMI G   +G  + A+  F ++    +
Sbjct: 333 TALLDMYAKCGRLDMGWEVFEEMKE-REIFTWNAMIGGLAIHGRAEDALELFSKLQEGRM 391

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           +PNG T   +LTA         HA                        G +D+  ++F+ 
Sbjct: 392 KPNGITLVGVLTA-------CAHA------------------------GFVDKGLRIFQT 420

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ----LTSEGVKPNEFTFSSVINAC 489
           +  ++       L  Y  + D  G   ++ +    + S  +KPN   + +++ AC
Sbjct: 421 M--REFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGAC 473



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 150/350 (42%), Gaps = 43/350 (12%)

Query: 103 ECVKSGFA----RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           E  K  FA    +++     +++   +  N+ D R++FD+M+E + +SW+S++ GY    
Sbjct: 214 EAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAG 273

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                LE+F +MQ E  +P  F  S+VL   ++ G +     VH  + +N  ++   +  
Sbjct: 274 RYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT 333

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL+ MY K   +     VF+ M++R+  TWN+M+ G   +    +A E F+ +     + 
Sbjct: 334 ALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKP 393

Query: 279 TRSTFVSVIKLCA----TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
              T V V+  CA      K LR+ + +       G+D +      ++    + G   +A
Sbjct: 394 NGITLVGVLTACAHAGFVDKGLRIFQTMREFY---GVDPELEHYGCMVDLLGRSGLFSEA 450

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             + + M    +   W A++     +G  DLA        R G         I+L  +P 
Sbjct: 451 EDLINSMPMKPNAAVWGALLGACRIHGNFDLA-------ERVG--------KILLELEPQ 495

Query: 395 VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
            S   V                  L N Y K G  D+ +K+ +L+ ++ I
Sbjct: 496 NSGRYV-----------------LLSNIYAKVGRFDDVSKIRKLMKDRGI 528



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD   +R+ + ++ ++  Y     ++EAL +F  ++R         LSSVL  C  +
Sbjct: 248 RKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNI 307

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR VH    ++    D  + T+L+D+Y +   ++ G  VF++M E  + +W +++
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGG 210
            G A +   +  LELF ++Q   +KPN  T   VL   A  G V   +++  TM    G 
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVA 253
           +        ++ +  +S +  +A  + + M  + ++  W +++ 
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLG 471


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 257/738 (34%), Positives = 396/738 (53%), Gaps = 41/738 (5%)

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
            R+VFD +   +  ++ +L+  Y+        ++L+  M    + PN +TF  VL   + 
Sbjct: 53  ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
              +     +H      G      V  ALI +Y++      AR VF  M  RD + WN+M
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172

Query: 252 VAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           +AGY  + ++  A     +M    G     ST VS++ L A    L     +H+  L+  
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRAC 232

Query: 311 IDFDHN---IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           ++ +     I T L+  Y+KC ++  A ++F  M  +++ V+W+A+I G +    +  A 
Sbjct: 233 LEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGM-PVRNDVTWSALIGGFVLCDRMTEAF 291

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------------QVHAHIIKTNYEKSFS 414
           N F  M  EG+          L+A    S               Q+HA I K+      +
Sbjct: 292 NLFKDMLVEGL--------CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT 343

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
              +LL+ Y K G+++EA   F+ I  KD +++ A+L+G  Q G  E A  +++++ +  
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           ++P+  T  S+I AC+   AA++ GK  H   I   L     + ++L+ MY+K G I+ +
Sbjct: 404 MEPDIATMVSLIPACSH-LAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLS 462

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            +VF +   RD+VSWN+MI GY  HG  K+A  +F  M+ Q    D +TFI +I AC+H+
Sbjct: 463 RQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHS 522

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           GLV EG+ +FD M +++ I P MEHY CMVDL +R G+L++A   I  MP  A   VW  
Sbjct: 523 GLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGA 582

Query: 655 VLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
           +L ACR+                L P  +  +VLLSN+++A G + E A VR +   +  
Sbjct: 583 LLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGF 642

Query: 701 KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           KK  GYSWIE+    ++F+ GD SHP S  IY +L+ +   +K  GY+ DTS+VLQD+++
Sbjct: 643 KKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEE 702

Query: 761 EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 820
           E KE  L  HSE+LAIAFG+++      + + KNLRVCGDCHT IK ++ +  R I+VRD
Sbjct: 703 EEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRD 762

Query: 821 TNRFHHFKEGLCSCGDYW 838
           TNRFHHFK G CSCG++W
Sbjct: 763 TNRFHHFKNGQCSCGNFW 780



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 289/586 (49%), Gaps = 22/586 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR P  +   YN L+  Y        A++L+  + R  +     T   VLK C  L
Sbjct: 54  RQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSAL 113

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR +H     +G   D+ VST+L+DLY+R       R VF  M   +VV+W ++L
Sbjct: 114 VDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAML 173

Query: 152 SGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK--- 207
           +GYA + M    +     MQ   G++PN+ T  ++L +LA  G +     +H   ++   
Sbjct: 174 AGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACL 233

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E    +  AL+ MY K K +  A  VF GM  R+ +TW++++ G+V  +   EAF  
Sbjct: 234 EQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNL 293

Query: 268 FNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           F +M + G   L+ ++  S +++CA+  +L +  QLH+ + K+GI  D      L+  Y+
Sbjct: 294 FKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYA 353

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G + +A+  F  +  +KD +S+ A++SG +QNG  + A   F +M    + P+  T  
Sbjct: 354 KAGLINEATMFFDEI-AVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMV 412

Query: 387 IILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            ++ A   ++  Q     H  +I        S+  +L++ Y K G +D + +VF+ +  +
Sbjct: 413 SLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR 472

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+V+W+ M+AGY   G  + A  ++  + ++G  P++ TF  +I AC+  S  V +GK +
Sbjct: 473 DVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH-SGLVTEGKHW 531

Query: 503 -----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGY 556
                H   I  ++ + +C    +V + ++ G ++ A +  +    K D+  W +++   
Sbjct: 532 FDTMTHKYGILPRMEHYIC----MVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGAC 587

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
             H +     +V + +++   E  G  F+ +    + AG  DE  +
Sbjct: 588 RIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLSNIFSAAGRFDEAAE 632



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 13/246 (5%)

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           L  ++ +G L  A +VF+ I   D  A++A++  Y+ +G    A+ +YR +    V PN+
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           +TF  V+ AC+A    +  G+  HA +  A L+  L VS+AL+ +Y +      A  VF 
Sbjct: 101 YTFPFVLKACSA-LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVD 598
           +   RD+V+WN+M+ GYA HG    A+    +M+    L  +  T + ++      G + 
Sbjct: 160 KMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALF 219

Query: 599 EGQQYFDIMV------NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           +G       +      NE  +       + ++D+Y++   L  A  + + MP     T W
Sbjct: 220 QGTSIHAYCLRACLEQNEEQVLIG----TALLDMYAKCKQLVYACRVFHGMPVRNDVT-W 274

Query: 653 RTVLAA 658
             ++  
Sbjct: 275 SALIGG 280


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/656 (36%), Positives = 369/656 (56%), Gaps = 51/656 (7%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VFD +++   + WN+M  G+  +   + A + +  M   G      TF  ++K CA 
Sbjct: 56  AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI--------------- 337
           +   +  +QLH QVLK G D D  I T L+  Y + G++EDA K+               
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175

Query: 338 -------------FSMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                          M  E+  KDVVSW A ISG+ + G    A+  F +M +  VRP+ 
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T   +L+A           QVH+ I    +  +  +  AL++ Y K G L+ A  +F+ 
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD+++W+ ++ GY  +   + A+ +++ +   G KPN+ T  S+++AC A   A++ 
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSAC-AHLGAIDI 354

Query: 499 GKQFHACSIK--AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           G+  H    K    + NA  + ++L+ MY+K G+IE+A +VF     R L SWN+MI G+
Sbjct: 355 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGF 414

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A HG    A ++F  MR+  +E D ITF+G+++AC+H+G++D G+  F  M  ++ + P 
Sbjct: 415 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPK 474

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LI 662
           +EHY CM+DL   +G+ ++A  +IN M       +W ++L AC+              LI
Sbjct: 475 LEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLI 534

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            ++P +   YVLLSN+YA    W E A+ R L+ND+ +KK  G S IE+ +  + F+ GD
Sbjct: 535 KIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
             HP++ +IY  LEE+   L++AG+ PDTS VLQ++++E KE  L  HSE+LAIAFGL++
Sbjct: 595 KFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 654

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T  G  L IVKNLRVC +CH   KLISK+ +R+I+ RD  RFHHF++G CSC DYW
Sbjct: 655 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 231/496 (46%), Gaps = 41/496 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+FD   +   + +N +   +   S    AL L++ +  LGL     T   +LK+C    
Sbjct: 58  SVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSX 117

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+Q+H + +K GF  D+ + TSL+ +Y++   +ED ++V D  +  +VVS+T+L++
Sbjct: 118 AFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALIT 177

Query: 153 GYAR-------NKMNDRV------------------------LELFHRMQVEGIKPNSFT 181
           GYA        +KM D +                        LELF +M    ++P+  T
Sbjct: 178 GYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDEST 237

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             TVL   A  G +    QVH+ +  +G      + NALI +Y K   +  A  +F G+ 
Sbjct: 238 MVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLS 297

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           ++D I+WN+++ GY    L+ EA   F +M  +G +    T +S++  CA    + + R 
Sbjct: 298 NKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRW 357

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    ++RT L+  Y+KCG +E A ++F  M   + + SW AMI G   
Sbjct: 358 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLN-RSLSSWNAMIFGFAM 416

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYE--KSFS 414
           +G  + A + F +M + G+ P+  T+  +L+A        +  HI ++   +Y+      
Sbjct: 417 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLE 476

Query: 415 VGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS- 472
               +++     G+  EA K+   ++ E D V W ++L      G+ E      + L   
Sbjct: 477 HYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKI 536

Query: 473 EGVKPNEFTFSSVINA 488
           E   P  +   S I A
Sbjct: 537 EPENPGSYVLLSNIYA 552



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 208/416 (50%), Gaps = 53/416 (12%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC------GKMEDASKI 337
           +S++  C T + LR+   +H+Q++K G+   HN    L      C        +  A  +
Sbjct: 6   LSLLHXCKTLQSLRI---IHAQMIKTGL---HNTNYALSKLLEXCVLSPHFDGLPYAISV 59

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  ++E   ++ W  M  GH  +     A+  +  M   G+ PN +T+  +L +      
Sbjct: 60  FDTIQE-PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXA 118

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV------------------ 435
           F    Q+H  ++K  ++    + T+L++ YV+ G L++A KV                  
Sbjct: 119 FKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITG 178

Query: 436 -------------FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
                        F+ I  KD+V+W+A ++GYA+ G+ + A+++++++    V+P+E T 
Sbjct: 179 YASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTM 238

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            +V++AC A S ++E G+Q H+          L + +AL+ +YSK G +E+A  +F+   
Sbjct: 239 VTVLSAC-AQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLS 297

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D++SWN++I GY      K+AL +F++M R   + + +T + +++AC H G +D G +
Sbjct: 298 NKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIG-R 356

Query: 603 YFDIMVNEH--HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           +  + +++    +       + ++D+Y++ G +E A  + + M    S + W  ++
Sbjct: 357 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMI 411



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 37/293 (12%)

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDE---AAKVFELIDEKDIVAWSAMLAGYAQ 456
           +HA +IKT    +    + LL   V     D    A  VF+ I E  ++ W+ M  G+A 
Sbjct: 21  IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHAL 80

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
             D   A+K+Y  + S G+ PN +TF  ++ +C A S A ++G+Q H   +K   +  L 
Sbjct: 81  SSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSC-AKSXAFKEGQQLHGQVLKFGFDLDLY 139

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC---------------------- 554
           + ++L++MY + G +E A +V  +   RD+VS+ ++I                       
Sbjct: 140 IHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKD 199

Query: 555 ---------GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
                    GYA+ G+ K+ALE+FK+M + ++  D  T + V++AC  +G ++ G+Q   
Sbjct: 200 VVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHS 259

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
             +N+H     ++  + ++DLYS+ G LE A  +   +        W T++  
Sbjct: 260 -WINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLS-NKDVISWNTLIGG 310


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 354/595 (59%), Gaps = 21/595 (3%)

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           +LH  A    + M   G      T+  +IK C+    ++  +++H  +   G +    + 
Sbjct: 35  DLH-RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVV 93

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y K   +E+A  +F  M E ++VVSWT MIS +  N   D A+     M REGV
Sbjct: 94  NTLLNMYVKFNLLEEAEDLFDEMPE-RNVVSWTTMISAY-SNKLNDKALKCLILMFREGV 151

Query: 379 RPNGFTYSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
           RPN FTYS +L A   +    Q+H  IIKT  E    V +AL++ Y K   LD A  VF+
Sbjct: 152 RPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFD 211

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            +  +D+V W++++ G+AQ  D   A+ +++++   G   ++ T +SV+ ACT   A +E
Sbjct: 212 EMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTG-LALLE 270

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G+Q H   +K   +  L +++AL+ MY K G++E A+  F R  ++D++SW++M+ G A
Sbjct: 271 LGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           Q+G++++ALE+F+ M+      + IT +GV+ AC+HAGLV++G  YF  M     + P  
Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGR 388

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LIS 663
           EHY C++DL  RAG L++A+ +I+ M     +  WRT+L ACR              +I 
Sbjct: 389 EHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE 448

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           L+P D+  Y+LLSN+YA T  W++ A VRK M +R ++K  G SWIEV  + + F+ GD 
Sbjct: 449 LEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDT 508

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
           SHP+  +I  +L +L  R+   GY PDT++VLQD++ E KE  L  HSE+LAI FGL+  
Sbjct: 509 SHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNL 568

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
                ++I KNLR+CGDCH   K++S++E R IV+RD  R+HHF++G+CSCGDYW
Sbjct: 569 SREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/450 (32%), Positives = 225/450 (50%), Gaps = 40/450 (8%)

Query: 37  RSPQRNFVEYNRLLFEY---CRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           + P R   + + L+ E+   C       A+     + R G+     T S ++K C     
Sbjct: 11  KPPLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGA 70

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G++VH      G+   + V  +L+++Y++ N +E+   +FD+M E NVVSWT+++S 
Sbjct: 71  VQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISA 130

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y+ NK+ND+ L+    M  EG++PN FT+S+VL   A +G+     Q+H  +IK G E  
Sbjct: 131 YS-NKLNDKALKCLILMFREGVRPNMFTYSSVLR--ACDGL-PNLRQLHCGIIKTGLESD 186

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +ALI +Y K   + +A  VFD M  RD + WNS++ G+  N    EA   F  M  
Sbjct: 187 VFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKR 246

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG    ++T  SV++ C     L L RQ+H  VLK   D D  +   L+  Y KCG +ED
Sbjct: 247 AGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLED 304

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A+  FS M E KDV+SW+ M++G  QNG    A+  F  M   G RPN   Y  +L    
Sbjct: 305 ANSAFSRMVE-KDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPN---YITVLGVLF 360

Query: 394 AVSPFQVHAHIIKTNY------EKSFSVGTA------LLNAYVKKGILDEAAK-VFELID 440
           A S    HA +++  +      +K F V         L++   + G LDEA K + E+  
Sbjct: 361 ACS----HAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMEC 416

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           E D V W  +L          GA +++R +
Sbjct: 417 EPDSVTWRTLL----------GACRVHRNV 436



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 218/430 (50%), Gaps = 15/430 (3%)

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
           R +     M+  G+  ++ T+S ++   +  G V    +VH  +   G E    V N L+
Sbjct: 38  RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLL 97

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           +MY+K  ++ +A  +FD M +R+ ++W +M++ Y +N+L+ +A +    M   G      
Sbjct: 98  NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMF 156

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T+ SV++ C     L   RQLH  ++K G++ D  +R+ L+  YSK   +++A  +F  M
Sbjct: 157 TYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEM 213

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
              +D+V W ++I G  QN   + A+N F +M R G   +  T + +L A   ++     
Sbjct: 214 -PTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELG 272

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            QVH H++K  +++   +  AL++ Y K G L++A   F  + EKD+++WS M+AG AQ 
Sbjct: 273 RQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQN 330

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHACSIKAKLNNALC 516
           G +  A++++  +   G +PN  T   V+ AC+  +  VE+G   F +      ++    
Sbjct: 331 GYSRQALELFESMKESGSRPNYITVLGVLFACSH-AGLVEKGWYYFRSMKKLFGVDPGRE 389

Query: 517 VSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
               L+ +  + G ++ A ++      + D V+W +++     H +   A+   K++   
Sbjct: 390 HYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIEL 449

Query: 576 DLEFDGITFI 585
           + E D  T+I
Sbjct: 450 EPE-DAGTYI 458



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 172/337 (51%), Gaps = 7/337 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+RN V +  ++  Y  + L+ +AL   + + R G+     T SSVL+ C  L
Sbjct: 110 EDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGL 168

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +    RQ+HC  +K+G   DV V ++L+D+Y + +++++   VFD+M   ++V W S++
Sbjct: 169 PNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSII 225

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G+A+N   +  L LF RM+  G   +  T ++VL       ++    QVH  V+K   +
Sbjct: 226 GGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQD 285

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           ++ +  NALI MY K   + DA + F  M ++D I+W++MVAG   N    +A E F +M
Sbjct: 286 LILN--NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESM 343

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGK 330
             +G+     T + V+  C+    +         + K  G+D        L+    + G+
Sbjct: 344 KESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGR 403

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           +++A K+   M    D V+W  ++     +  +DLA+
Sbjct: 404 LDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAI 440



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
            A +    D   A++    +   GV  +  T+S +I  C+A   AV++GK+ H       
Sbjct: 27  FANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSA-RGAVQEGKRVHEHIFCKG 85

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
               + V + L+ MY K   +E A ++F    +R++VSW +MI  Y+      KAL+   
Sbjct: 86  YEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLI 144

Query: 571 EMRRQDLEFDGITFIGVITACT--------HAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            M R+ +  +  T+  V+ AC         H G++  G +  D+ V            S 
Sbjct: 145 LMFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLES-DVFVR-----------SA 192

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           ++D+YS+   L+ A+ + + MP      VW +++  
Sbjct: 193 LIDVYSKWSDLDNALGVFDEMP-TRDLVVWNSIIGG 227


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/727 (34%), Positives = 414/727 (56%), Gaps = 24/727 (3%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P RN V +N ++  + + + ++EAL  F  + + G+    STL+SVL     L     G 
Sbjct: 178 PIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGL 237

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
            VH   +K GF   + V++SL+++Y +    +D R+VFD +++ N++ W ++L  Y++N 
Sbjct: 238 LVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNG 297

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               V+ELF  M   GI P+ FT++++L   A    +    Q+H+ +IK        V N
Sbjct: 298 FLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNN 357

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ALI MY K+  +++A   F+ M  RD I+WN+++ GYV  E+   AF  F  M L G   
Sbjct: 358 ALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVP 417

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              +  S++  C   K L   +Q H   +K G++ +    + L+  YSKCG ++DA K +
Sbjct: 418 DEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTY 477

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT----AQPA 394
           S M E + VVS  A+I+G+      + ++N   +M   G++P+  T++ ++     +   
Sbjct: 478 SSMPE-RSVVSVNALIAGYALKNTKE-SINLLHEMQILGLKPSEITFASLIDVCKGSAKV 535

Query: 395 VSPFQVHAHIIKTNYE-KSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLA 452
           +   Q+H  I+K      S  +GT+LL  Y+    L +A  +F E    K IV W+A+++
Sbjct: 536 ILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALIS 595

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G+ Q   ++ A+ +YR++    + P++ TF +V+ AC   S ++  G++ H+       +
Sbjct: 596 GHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLS-SLHDGREIHSLIFHTGFD 654

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                SSALV MY+K G+++S+ +VF+    K+D++SWNSMI G+A++G+ K AL+VF E
Sbjct: 655 LDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDE 714

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M +  +  D +TF+GV+TAC+HAG V EG+Q FD+MVN + I P ++HY+CMVDL  R G
Sbjct: 715 MTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWG 774

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
            L++A + I+++    +A +W  +L ACR              LI L+P  S+ YVLLSN
Sbjct: 775 FLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSN 834

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           MYAA+G+W E   +R+ M  + ++K  G SWI V  +T  F+AGDISH   ++I   L+ 
Sbjct: 835 MYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKH 894

Query: 738 LSTRLKD 744
           L+  +KD
Sbjct: 895 LTALIKD 901



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 295/577 (51%), Gaps = 28/577 (4%)

Query: 9   SLINPQTK-QPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFL 67
           SLIN   K Q P   R          +FD   Q+N + +N +L  Y ++      + LFL
Sbjct: 257 SLINMYGKCQMPDDARQ---------VFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFL 307

Query: 68  GIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN 127
            +   G+     T +S+L TC C      GRQ+H   +K  F  ++ V+ +L+D+Y +  
Sbjct: 308 DMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAG 367

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
            +++  + F+ M   + +SW +++ GY + ++      LF RM ++GI P+  + +++L 
Sbjct: 368 ALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILS 427

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
              +  ++    Q H + +K G E      ++LI MY K   ++DA   +  M +R  ++
Sbjct: 428 ACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVS 487

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
            N+++AGY       E+    + M + G + +  TF S+I +C  + ++ L  Q+H  ++
Sbjct: 488 VNALIAGYALKNTK-ESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIV 546

Query: 308 KNGIDFDHN-IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           K G+      + T L+  Y    ++ DA+ +FS    +K +V WTA+ISGH+QN   D+A
Sbjct: 547 KRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVA 606

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
           +N + +M    + P+  T+  +L A   +S      ++H+ I  T ++      +AL++ 
Sbjct: 607 LNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDM 666

Query: 423 YVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
           Y K G +  + +VF EL  +KD+++W++M+ G+A+ G  + A+K++ ++T   + P++ T
Sbjct: 667 YAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVT 726

Query: 482 FSSVINACTAPSAAVEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           F  V+ AC+  +  V +G+Q      +   I+ ++++  C    +V +  + G ++ A E
Sbjct: 727 FLGVLTACS-HAGWVYEGRQIFDVMVNYYGIEPRVDHYAC----MVDLLGRWGFLKEAEE 781

Query: 537 VF-KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
              K + + + + W +++     HG  K+     K++
Sbjct: 782 FIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKL 818



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 257/531 (48%), Gaps = 47/531 (8%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD- 138
           T +  L  C  L +   GR VH   +KSG         +L+ LY + N++   R +F   
Sbjct: 49  TFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASA 108

Query: 139 -MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
                + VSWT+L+SGY +  +    L +F +M+   + P+     TVL           
Sbjct: 109 PFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVL----------- 156

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM--EDRDSITWNSMVAGY 255
                               NA IS+      + DA  +F  M    R+ + WN M++G+
Sbjct: 157 --------------------NAYISL----GKLDDACQLFQQMPIPIRNVVAWNVMISGH 192

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                + EA   F+ M   G + +RST  SV+   A+   L     +H+  +K G +   
Sbjct: 193 AKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSI 252

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + L+  Y KC   +DA ++F  + + K+++ W AM+  + QNG +   +  F  M  
Sbjct: 253 YVASSLINMYGKCQMPDDARQVFDAISQ-KNMIVWNAMLGVYSQNGFLSNVMELFLDMIS 311

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
            G+ P+ FTY+ IL+            Q+H+ IIK  +  +  V  AL++ Y K G L E
Sbjct: 312 CGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKE 371

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A K FE +  +D ++W+A++ GY Q     GA  ++R++  +G+ P+E + +S+++AC  
Sbjct: 372 AGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSAC-G 430

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
               +E G+QFH  S+K  L   L   S+L+ MYSK G+I+ A + +    +R +VS N+
Sbjct: 431 NIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNA 490

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           +I GYA   +TK+++ +  EM+   L+   ITF  +I  C  +  V  G Q
Sbjct: 491 LIAGYALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQ 540



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 252/495 (50%), Gaps = 51/495 (10%)

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
           ++RVL+ +      G  P+ FTF+  L   A    +     VH+ VIK+G E  +    A
Sbjct: 28  SERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGA 87

Query: 220 LISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           LI +Y K   +  AR +F         +++W ++++GYV   L  EA   F+ M      
Sbjct: 88  LIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKM------ 141

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                                         +N    D      ++ AY   GK++DA ++
Sbjct: 142 ------------------------------RNSAVPDQVALVTVLNAYISLGKLDDACQL 171

Query: 338 FSMMR-EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           F  M   +++VV+W  MISGH +    + A+ FF QM++ GV+ +  T + +L+A  +++
Sbjct: 172 FQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLA 231

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                  VHAH IK  +E S  V ++L+N Y K  + D+A +VF+ I +K+++ W+AML 
Sbjct: 232 ALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLG 291

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            Y+Q G     ++++  + S G+ P+EFT++S+++ C A    +E G+Q H+  IK +  
Sbjct: 292 VYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTC-ACFEYLEVGRQLHSAIIKKRFT 350

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           + L V++AL+ MY+K G ++ A + F+    RD +SWN++I GY Q      A  +F+ M
Sbjct: 351 SNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRM 410

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSR 629
               +  D ++   +++AC +  +++ GQQ+  + V    E +++      S ++D+YS+
Sbjct: 411 ILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAG----SSLIDMYSK 466

Query: 630 AGMLEKAMDIINRMP 644
            G ++ A    + MP
Sbjct: 467 CGDIKDAHKTYSSMP 481


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/629 (37%), Positives = 369/629 (58%), Gaps = 43/629 (6%)

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           W+S++  Y ++ L   +F +FN+M        R  F S++K     K  +LA  LH+  +
Sbjct: 78  WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137

Query: 308 KNGIDFDHNIRTGLMVAYSK---CGKMEDA------------SKIFSMMREMKDVVSWTA 352
           + G+D D  I   L+  Y+K    GK+ D              K+F MM  ++DVVSW  
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMM-PVRDVVSWNT 196

Query: 353 MISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF-------QVHAHI 404
           +I+G  QNG    A++   +M + G ++P+ FT S IL   P  +         ++H + 
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSIL---PIFAEHVDVNKGKEIHGYA 253

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           ++  ++    +G++L++ Y K   L+ + + F ++  KD ++W++++AG  Q G+ +  +
Sbjct: 254 VRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGL 313

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
             +R++  E VKP   +FSSVI AC A   A+  G+Q H C ++   ++   ++S+LV M
Sbjct: 314 GFFRRMLKENVKPMAVSFSSVIPAC-AHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDM 372

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K GNI+ A  VF R  KRD+V+W ++I G A HGH   A+ +F+ M    +    + F
Sbjct: 373 YAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAF 432

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM- 643
           + V+TAC+HAGLVDEG +YF+ M  +  I P +EHY+ + DL  RAG LE+A D I+ M 
Sbjct: 433 MAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMR 492

Query: 644 PFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERA 689
               + +VW  +LAACR              L+S+   +   YVL+SN+Y+A   W++ A
Sbjct: 493 GVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAA 552

Query: 690 RVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
           R+R  M  + +KK    SWIEV N+ ++F+AGD SHP  ++I   L+ L  +++  GY  
Sbjct: 553 RLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVI 612

Query: 750 DTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLIS 809
           DT+ VL D+D+E K  +L  HSERLAIA+G+++T AG  ++++KN+RVC DCHT IK I+
Sbjct: 613 DTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIKFIT 672

Query: 810 KLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           K+  R+I VRD +RFHHFK G CSCGDYW
Sbjct: 673 KIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 220/455 (48%), Gaps = 23/455 (5%)

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +W+S++  Y  + +       F+ M+   + PN   F ++L           A  +H   
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 206 IKNGGEVVTSVCNALISMYLK---SKMVRD------------ARAVFDGMEDRDSITWNS 250
           ++ G +    + NALI+ Y K   +  V D             + VFD M  RD ++WN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKN 309
           ++AG+  N +++EA +    MG  G     S T  S++ + A   ++   +++H   ++N
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           G D D  I + L+  Y+KC ++E + + F ++   KD +SW ++I+G +QNG  D  + F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPR-KDAISWNSIIAGCVQNGEFDRGLGF 315

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F +M +E V+P   ++S ++ A   ++      Q+H  I++  ++ +  + ++L++ Y K
Sbjct: 316 FRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAK 375

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G +  A  VF+ ID++D+VAW+A++ G A  G    AV ++  +  +GV+P    F +V
Sbjct: 376 CGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAV 435

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + AC+      E  + F++      +   L   +A+  +  + G +E A +     R   
Sbjct: 436 LTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQ 495

Query: 546 LVS--WNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
                W+ ++     H   + A +V  ++   D E
Sbjct: 496 PTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSE 530



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 175/346 (50%), Gaps = 19/346 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG----LPLFGSTLSSVLKT 87
           + +FD  P R+ V +N ++  + ++ ++ EAL++   +R +G    L     TLSS+L  
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDM---VREMGKNGKLKPDSFTLSSILPI 236

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
                D   G+++H   V++GF  DV + +SL+D+Y + N +E   R F  +   + +SW
Sbjct: 237 FAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISW 296

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            S+++G  +N   DR L  F RM  E +KP + +FS+V+   A    ++   Q+H  +++
Sbjct: 297 NSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVR 356

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G +    + ++L+ MY K   ++ AR VFD ++ RD + W +++ G   +   ++A   
Sbjct: 357 LGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSL 416

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL----MV 323
           F NM   G       F++V+  C+    +    +       N ++ D  I  GL     V
Sbjct: 417 FENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYF-----NSMERDFGIAPGLEHYAAV 471

Query: 324 A--YSKCGKMEDASKIFSMMREMKDVVS-WTAMISGHLQNGAIDLA 366
           A    + G++E+A    S MR ++   S W+ +++    + +++LA
Sbjct: 472 ADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELA 517


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/725 (35%), Positives = 411/725 (56%), Gaps = 72/725 (9%)

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           +F+     NV  +TS+L  Y+  + + +V+ ++ +MQ  G++P++F +  ++      GI
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI 115

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMV 252
                  H  V+K G      V NA+I MY +   +  AR VFD + D  R    WN+MV
Sbjct: 116 -----GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           +GY   E   +A   F+ M                                    +N I 
Sbjct: 171 SGYWKWESEGQAQWLFDVMPE----------------------------------RNVIT 196

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
           +     T ++  Y+K   +E A + F  M E + VVSW AM+SG+ QNG  + A+  F +
Sbjct: 197 W-----TAMVTGYAKVKDLEAARRYFDCMPE-RSVVSWNAMLSGYAQNGLAEEALRLFDE 250

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS----VGTALLNAYVKKGI 428
           M   G+ P+  T+  +++A  +     + A +++T ++K       V TALL+ Y K G 
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGD 310

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL-TSEGVKPNEFTFSSVIN 487
           LD A K+F  +  +++V W++M+AGYAQ G +  A+++++++ T++ + P+E T  SVI+
Sbjct: 311 LDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVIS 370

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           AC     A+E G        + ++  ++   +A++ MYS+ G++E A  VF+    RD+V
Sbjct: 371 AC-GHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVV 429

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           S+N++I G+A HGH  +A+ +   M+   +E D +TFIGV+TAC+HAGL++EG++ F+ +
Sbjct: 430 SYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI 489

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL----------- 656
            +     P ++HY+CMVDL  R G LE A   + RMP    A V+ ++L           
Sbjct: 490 KD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVEL 544

Query: 657 ---AACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKN 713
              AA +L  L+P +S  ++LLSN+YA+ G W++  R+R+ M    VKK  G+SW+E   
Sbjct: 545 GELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGG 604

Query: 714 KTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSER 773
           K + F+  D SH +S+ IY  L EL  ++++AGY  D S VL+D+++E KE I+  HSE+
Sbjct: 605 KLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEK 664

Query: 774 LAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCS 833
           LAI + L+ + AGA +++VKNLRVC DCHT IK+ISKLE R I+VRD NRFH F +GLCS
Sbjct: 665 LAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCS 724

Query: 834 CGDYW 838
           C DYW
Sbjct: 725 CKDYW 729



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/538 (23%), Positives = 251/538 (46%), Gaps = 64/538 (11%)

Query: 10  LINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI 69
           LIN  T+     LR+P +      LF+ +   N   +  +L  Y     H + + ++  +
Sbjct: 39  LINHCTR-----LRAPPHYT--HLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQM 91

Query: 70  RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
           +  G+         ++K+ G       G   H   +K G   D  V  +++D+Y R   +
Sbjct: 92  QGCGVRPDAFVYPILIKSAG-----TGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPI 146

Query: 130 EDGRRVFDDMN--ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
              R+VFD++   E  V  W +++SGY + +   +   LF  M     + N  T++    
Sbjct: 147 GHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP----ERNVITWT---- 198

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
                                          A+++ Y K K +  AR  FD M +R  ++
Sbjct: 199 -------------------------------AMVTGYAKVKDLEAARRYFDCMPERSVVS 227

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WN+M++GY  N L  EA   F+ M  AG E   +T+V+VI  C++  +  LA  L   + 
Sbjct: 228 WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           +  I  +  +RT L+  Y+K G ++ A K+F+ M   ++VV+W +MI+G+ QNG   +A+
Sbjct: 288 QKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTM-PGRNVVTWNSMIAGYAQNGQSAMAI 346

Query: 368 NFFCQM-TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK----SFSVGTALLNA 422
             F +M T + + P+  T   +++A   +   ++   +++   E     S S   A++  
Sbjct: 347 ELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFM 406

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y + G +++A +VF+ +  +D+V+++ +++G+A  G    A+ +   +   G++P+  TF
Sbjct: 407 YSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTF 466

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
             V+ AC+  +  +E+G++         +++  C    +V +  + G +E A    +R
Sbjct: 467 IGVLTACSH-AGLLEEGRKVFESIKDPAIDHYAC----MVDLLGRVGELEDAKRTMER 519



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 182/380 (47%), Gaps = 38/380 (10%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V   T++V  Y +  ++E  RR FD M E +VVSW ++LSGYA+N + +  L LF  M
Sbjct: 192 RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM 251

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              GI+P+  T+ TV+   +  G    A  +   + +   ++   V  AL+ MY K   +
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDL 311

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT--RSTFVSVIK 288
             AR +F+ M  R+ +TWNSM+AGY  N     A E F  M +   +LT    T VSVI 
Sbjct: 312 DSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEM-ITAKKLTPDEVTMVSVIS 370

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C     L L   +   + +N I    +    ++  YS+CG MEDA ++F  M   +DVV
Sbjct: 371 ACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM-ATRDVV 429

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTN 408
           S+  +ISG   +G    A+N    M   G+ P+  T+  +LTA         HA      
Sbjct: 430 SYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS-------HA------ 476

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                             G+L+E  KVFE I +  I  ++ M+    ++G+ E A +   
Sbjct: 477 ------------------GLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTME 518

Query: 469 QLTSEGVKPNEFTFSSVINA 488
           ++  E   P+   + S++NA
Sbjct: 519 RMPME---PHAGVYGSLLNA 535



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 5/308 (1%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD  P+R+ V +N +L  Y ++ L +EAL LF  +   G+    +T  +V+  C    D 
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
                +     +     +  V T+L+D+Y +  +++  R++F+ M   NVV+W S+++GY
Sbjct: 277 CLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGY 336

Query: 155 ARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           A+N  +   +ELF  M   + + P+  T  +V+      G +     V   + +N  ++ 
Sbjct: 337 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLS 396

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            S  NA+I MY +   + DA+ VF  M  RD +++N++++G+  +   +EA    + M  
Sbjct: 397 ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKE 456

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E  R TF+ V+  C+    L   R++   +    ID        ++    + G++ED
Sbjct: 457 GGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDH----YACMVDLLGRVGELED 512

Query: 334 ASKIFSMM 341
           A +    M
Sbjct: 513 AKRTMERM 520


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/699 (33%), Positives = 390/699 (55%), Gaps = 61/699 (8%)

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
           + A Q+H   I+      TS  + +IS+Y   K++ +A  +F  ++    + W S++  +
Sbjct: 22  SQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
               L  +A  +F  M  +G     + F SV+K C    +LR    +H  +++ G+D D 
Sbjct: 81  TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREM------------------------------- 344
                LM  Y+K   M     + ++  EM                               
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200

Query: 345 ----KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-- 398
               KDVVS+  +I+G+ Q+G  + A+    +M    ++P+ FT S +L   P  S +  
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL---PIFSEYVD 257

Query: 399 -----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                ++H ++I+   +    +G++L++ Y K   ++++ +VF  +  +D ++W++++AG
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q G    A++++RQ+ +  VKP    FSSVI AC A  A +  GKQ H   ++    +
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC-AHLATLHLGKQLHGYVLRGGFGS 376

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + ++SALV MYSK GNI++A ++F R    D VSW ++I G+A HGH  +A+ +F+EM+
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           RQ ++ + + F+ V+TAC+H GLVDE   YF+ M   + +   +EHY+ + DL  RAG L
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
           E+A + I++M    + +VW T+L++C              ++ ++   +   YVL+ NMY
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A+ G W+E A++R  M  + ++K+   SWIE+KNKT+ F++GD SHP  ++I   L+ + 
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVM 616

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            +++  GY  DTS VL D+D+EHK  +L  HSERLA+AFG++ T  G  +++ KN+R+C 
Sbjct: 617 EQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICT 676

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH  IK ISK+  R+I+VRD +RFHHF  G CSCGDYW
Sbjct: 677 DCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 224/474 (47%), Gaps = 66/474 (13%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           +   SL  +AL  F+ +R  G     +   SVLK+C  + D  FG  VH   V+ G   D
Sbjct: 80  FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139

Query: 113 VNVSTSLVDLY--------------------MRTNN----------------VEDGRRVF 136
           +    +L+++Y                     RT+N                ++  RRVF
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199

Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           + M   +VVS+ ++++GYA++ M +  L +   M    +KP+SFT S+VL + ++   V 
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
              ++H  VI+ G +    + ++L+ MY KS  + D+  VF  +  RD I+WNS+VAGYV
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
            N  + EA   F  M  A  +     F SVI  CA    L L +QLH  VL+ G   +  
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           I + L+  YSKCG ++ A KIF  M  + D VSWTA+I GH  +G    AV+ F +M R+
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           GV+PN   +  +LTA         H  ++   +                 G  +   KV+
Sbjct: 439 GVKPNQVAFVAVLTACS-------HVGLVDEAW-----------------GYFNSMTKVY 474

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            L  E +  A  A L G A  G  E A   Y  ++   V+P    +S+++++C+
Sbjct: 475 GLNQELEHYAAVADLLGRA--GKLEEA---YNFISKMCVEPTGSVWSTLLSSCS 523



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 184/400 (46%), Gaps = 38/400 (9%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           PF     + +F+  P+++ V YN ++  Y +  ++++AL +   +    L     TLSSV
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L       D + G+++H   ++ G   DV + +SLVD+Y ++  +ED  RVF  +   + 
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           +SW SL++GY +N   +  L LF +M    +KP +  FS+V+   A    +    Q+H  
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           V++ G      + +AL+ MY K   ++ AR +FD M   D ++W +++ G+  +    EA
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F  M   G +  +  FV+V+  C+                            GL+  
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACS--------------------------HVGLV-- 460

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
               G     +K++ + +E++   +   ++    + G ++ A NF  +M    V P G  
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLG---RAGKLEEAYNFISKMC---VEPTGSV 514

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
           +S +L++       ++   +     EK F+V +  + AYV
Sbjct: 515 WSTLLSSCSVHKNLELAEKVA----EKIFTVDSENMGAYV 550



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 191/408 (46%), Gaps = 50/408 (12%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           +++   ++IK     K    A+QLH+Q ++      H   + ++  Y+    + +A  +F
Sbjct: 4   SKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLF 62

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             ++    V++W ++I           A+  F +M   G  P+   +  +L +   +   
Sbjct: 63  KTLKS-PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121

Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVK----------KGILDEAA----------- 433
           +    VH  I++   +     G AL+N Y K            + DE             
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181

Query: 434 ---------------KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
                          +VFE++  KD+V+++ ++AGYAQ G  E A+++ R++ +  +KP+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
            FT SSV+    +    V +GK+ H   I+  +++ + + S+LV MY+K   IE +  VF
Sbjct: 242 SFTLSSVL-PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
            R   RD +SWNS++ GY Q+G   +AL +F++M    ++   + F  VI AC H   + 
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360

Query: 599 EGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            G+Q    ++      +I+      S +VD+YS+ G ++ A  I +RM
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIA----SALVDMYSKCGNIKAARKIFDRM 404


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 251/832 (30%), Positives = 429/832 (51%), Gaps = 26/832 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD     N + +  ++  Y       EAL +    R        S L+  ++  G  
Sbjct: 118 RRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMK 177

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM----NESNVVSW 147
            D   GR  H    + G+  D  V+ SL+ +Y     +E   + FD        S+VVSW
Sbjct: 178 RDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSW 237

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T +L+    ++     L+LF RM+ +G+ P+   F TVL  +   G +A   ++H+MV+ 
Sbjct: 238 TKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLD 297

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E  + V  A++ MY +   ++DA   FD ++      W  +V  Y          + 
Sbjct: 298 RELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQI 357

Query: 268 FNNMGLAGAELTRSTFVSVIKLCA--TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
              M   G +    TF++++  C     ++ +  + L S+  +  +D    I T ++  +
Sbjct: 358 LERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMF 417

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           S+   M  A + F  + + K V ++TAMI+G+  N     A+  F +M R  V  +    
Sbjct: 418 SRFSSMILAREAFDKISQ-KSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVL 476

Query: 386 SIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           ++ ++A  ++   +    +H   +     +   V TAL++ Y + G +++A+ VF  I+ 
Sbjct: 477 AVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIER 536

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            D VAWSAM+A   + GD  GAV +  ++  +G +P+  T   V+ AC       E  ++
Sbjct: 537 PDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARK 596

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI---CGYAQ 558
            H+  +    ++   V  A++ MY+K G+I+ A   F +    D+ +W +M+   C   +
Sbjct: 597 VHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGK 656

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           +  + +AL++ + M++  +  D +TF+ ++TAC + G + E  +YF  M  ++ + P ME
Sbjct: 657 YNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEME 716

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPH----------- 667
           HY  +VD  +R G L++A D+I  +P   +  +W  +L  C+  +  P            
Sbjct: 717 HYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKI 776

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           ++ +  L +  +     W+E  RVRKLM DR +KKE G S I +KN  + F+AGD SHP 
Sbjct: 777 NNKLDPLGTGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPH 836

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
           + +IY++++ ++  +K  GY PDT YVL D+ ++ KE +L  HSERLA+A+G + TP G 
Sbjct: 837 TREIYAEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQ 896

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
           PL+++KNLRVCGDCHT  KL +K+ +R+I+VRD  RFHHF K+G CSCGDYW
Sbjct: 897 PLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 154/650 (23%), Positives = 295/650 (45%), Gaps = 31/650 (4%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR 134
           P    +   VL+ C  L     G +VH    +S    +  V   LV +Y    N  + RR
Sbjct: 60  PFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARR 119

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           +FD +   NV+S+T+++  Y      D  L++ H  +++  K +    +  +     +  
Sbjct: 120 IFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRD 179

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR----DSITWNS 250
           ++     H  + + G ++   V  +LI MY     +  A   FD    R    D ++W  
Sbjct: 180 LSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTK 239

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           ++A    +  ++ A + F+ M   G    R  FV+V+       ++   +++HS VL   
Sbjct: 240 ILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRE 299

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           ++ D  + T ++  Y++ G ++DA + F  + +   V +WT ++  + + G+ +  +   
Sbjct: 300 LERDSMVGTAVVKMYARIGSIQDACRAFDRI-DQPGVAAWTVLVGAYCRLGSFNSVMQIL 358

Query: 371 CQMTREGVRPNGFTYSIILTA------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
            +M  EGV+PN  T+  IL        +       + +   + + + S  +GTA++  + 
Sbjct: 359 ERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFS 418

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           +   +  A + F+ I +K + A++AM+AGYA       A+ I++++    V  +    + 
Sbjct: 419 RFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAV 478

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
            I+AC A    +E+GK  H  ++   L+    V +ALV MYS+ G++E AS VF    + 
Sbjct: 479 AISAC-ASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERP 537

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D V+W++MI    +HG  + A+ +   M++      G T +GV+ AC HAG+++E  +  
Sbjct: 538 DTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKV 597

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA-CRLIS 663
             ++ +       E    ++ +Y++ G +++A +  +++        W T+L A CRL  
Sbjct: 598 HSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCRLGK 656

Query: 664 LQPHDSAI-----------------YVLLSNMYAATGHWQERARVRKLMN 696
               D A+                 +V +    A  GH QE  R  K M 
Sbjct: 657 YNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMK 706


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/642 (36%), Positives = 366/642 (57%), Gaps = 48/642 (7%)

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           S+ N L+ MY       D + VFD M  ++ ++W  +++ Y  N    +A   F++M  +
Sbjct: 123 SIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQAS 182

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G     + ++S+++ C     L L +Q+HS V++  ++ +  + T +   Y +CG +E A
Sbjct: 183 GIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGA 242

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             +F  M + ++ V+WT ++ G+ Q   +++A+  F +M  EGV  + F +SI+L     
Sbjct: 243 KLVFDGM-DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCX 301

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +  +    Q+H+HI+K   E   SVGT L++ YVK G ++ A + F  I E + V+WSA+
Sbjct: 302 LEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSAL 361

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           ++G++Q G  E  +KI+  L SEGV  N F ++SV  AC A  A +  G Q H  +IK  
Sbjct: 362 ISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAA-QANLNMGSQAHGDAIKRG 420

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L + L   SA+VTMYSK G ++ A   F+   + D V+W ++I GYA HG+  +AL  F+
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFR 480

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M+   +  + +TFI V+TAC+H+GLV E +QY   M  ++ + PT++HY CM+D YSRA
Sbjct: 481 RMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRA 540

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLS 676
           G+L +A+++INRMPF   A  W+++L  C               L  L P D+A Y+LL 
Sbjct: 541 GLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLF 600

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N+Y+A G W+E   VRKLM +R++KKE   SWI VK        G +  P   ++ ++ +
Sbjct: 601 NLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVK--------GQVHRPV--RLLNEED 650

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           ++S  L                    KE +L  HSE+LAIAFGL++T   AP+ + KNLR
Sbjct: 651 DVSCSLP-----------------ARKEQLL-DHSEKLAIAFGLISTEDNAPILVFKNLR 692

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            C DCH   K +S +  R IVVRD+ RFHHFK G CSC DYW
Sbjct: 693 ACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 253/490 (51%), Gaps = 16/490 (3%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           + + CG L     GR +H    ++      ++   L+ +Y    +  D ++VFD+M   N
Sbjct: 93  LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKN 152

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +VSW  ++S YA+N   ++ + LF  MQ  GI+PNS  + ++L        +    Q+H+
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHS 212

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            VI+       +V  A+ +MY++   +  A+ VFDGM+ ++++TW  ++ GY   +    
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A E F  M + G EL    F  V+K+C   ++  + +Q+HS ++K G + + ++ T L+ 
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVD 332

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y KCG +E A + F  + E  D VSW+A+ISG  Q+G ++  +  F  +  EGV  N F
Sbjct: 333 FYVKCGDIESAYRSFGRISEPND-VSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSF 391

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
            Y+ +  A  A +      Q H   IK          +A++  Y K G LD A + FE I
Sbjct: 392 IYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESI 451

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           DE D VAW+A+++GYA  G+   A+  +R++ S GV+PN  TF +V+ AC+  S  V + 
Sbjct: 452 DEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACS-HSGLVAEA 510

Query: 500 KQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           KQ+         +K  +++  C    ++  YS+ G +  A E+  R   + D +SW S++
Sbjct: 511 KQYLGSMSRDYGVKPTIDHYDC----MIDTYSRAGLLXEALELINRMPFEPDAMSWKSLL 566

Query: 554 CGYAQHGHTK 563
            G   H   K
Sbjct: 567 GGCWAHCDLK 576



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 198/402 (49%), Gaps = 12/402 (2%)

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EA +    M  A   +T  ++  + + C   + L   R +H ++ +   +   +I   L+
Sbjct: 70  EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL 129

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y  CG   D  K+F  M  MK++VSW  +IS + +NG ++ A+  F  M   G+RPN 
Sbjct: 130 RMYCDCGSXIDVQKVFDEML-MKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNS 188

Query: 383 FTYSIILTAQPAVSPF------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             Y  +L  Q  + P       Q+H+H+I+     + +V TA+ N YV+ G L+ A  VF
Sbjct: 189 AVYMSLL--QSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVF 246

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           + +D ++ V W+ ++ GY Q    E A++++ ++  EGV+ +EF FS V+  C       
Sbjct: 247 DGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDW- 305

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           + GKQ H+  +K    + + V + LV  Y K G+IESA   F R  + + VSW+++I G+
Sbjct: 306 DMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           +Q G  +  +++F  +R + +  +   +  V  AC     ++ G Q     + +  +   
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAI-KRGLVSY 424

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +   S MV +YS+ G L+ A      +     A  W  +++ 
Sbjct: 425 LYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISG 465



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 164/324 (50%), Gaps = 1/324 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD    +N V +  L+  Y +    + AL LF  +   G+ L     S VLK C  L D
Sbjct: 245 VFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLED 304

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q+H   VK G   +V+V T LVD Y++  ++E   R F  ++E N VSW++L+SG
Sbjct: 305 WDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISG 364

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           ++++   +  +++F  ++ EG+  NSF +++V    A +  +    Q H   IK G    
Sbjct: 365 FSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSY 424

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
               +A+++MY K   +  AR  F+ +++ D++ W ++++GY  +    EA   F  M  
Sbjct: 425 LYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQS 484

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            G      TF++V+  C+ +  +  A+Q L S     G+    +    ++  YS+ G + 
Sbjct: 485 YGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLX 544

Query: 333 DASKIFSMMREMKDVVSWTAMISG 356
           +A ++ + M    D +SW +++ G
Sbjct: 545 EALELINRMPFEPDAMSWKSLLGG 568



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 95/209 (45%), Gaps = 5/209 (2%)

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           L   ++ G  + A    +++    V     ++  +  AC     ++  G+  H    +  
Sbjct: 59  LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEAC-GKLRSLADGRLIHDRLRRTV 117

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
            N +  + + L+ MY   G+     +VF     ++LVSW  +I  YA++G  +KA+ +F 
Sbjct: 118 KNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFS 177

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           +M+   +  +   ++ ++ +C     ++ G+Q +  ++  + +   T+E   C  ++Y R
Sbjct: 178 DMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAIC--NMYVR 235

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G LE A  + + M  A +A  W  ++  
Sbjct: 236 CGWLEGAKLVFDGMD-AQNAVTWTGLMVG 263


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 256/742 (34%), Positives = 393/742 (52%), Gaps = 23/742 (3%)

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           + +  +++ + +R        RVF  M E +V SW  ++ GY +  + +  L+L+HRM  
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMW 188

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G++P+ +TF  VL             +VH  V++ G      V NAL++MY K   V  
Sbjct: 189 AGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVA 248

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFD M   D I+WN+M+AG+  N       E F  M     +    T  SV      
Sbjct: 249 ARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGL 308

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             ++  A+++H   +K G   D      L+  Y+  G M  A  +FS M + +D +SWTA
Sbjct: 309 LSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRM-DTRDAMSWTA 367

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           MISG+ +NG  D A+  +  M    V P+  T +  L A   +    V   + +    K 
Sbjct: 368 MISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKG 427

Query: 413 FS----VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           F     V  ALL  Y K   +D+A +VF+ + EKD+V+WS+M+AG+        A+  +R
Sbjct: 428 FMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFR 487

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            + ++ VKPN  TF + + A  A + A+  GK+ HA  ++  +     + +AL+ +Y K 
Sbjct: 488 HMLAD-VKPNSVTFIAALAA-CAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKC 545

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G    A   F     +D+VSWN MI G+  HG+ + AL  F +M +     D +TF+ ++
Sbjct: 546 GQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALL 605

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC+  G+V EG + F  M +++ I P ++HY+CMVDL SR G L +A + IN MP    
Sbjct: 606 CACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPD 665

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A VW  +L  CR+              + L+P+D+  +VLL ++YA  G W + ARVRK 
Sbjct: 666 AAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKT 725

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M ++ +  ++G SW+EVK   ++FL  D SHPQ  +I + LE +  R+K +G  P  S+ 
Sbjct: 726 MREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVESHS 785

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
            +D     K+ I   HSERLA+AFGL+ T  G  + + KN   C  CH ++K+IS + RR
Sbjct: 786 PED--KVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRR 843

Query: 815 DIVVRDTNRFHHFKEGLCSCGD 836
           DI+VRD+ + HHFK+G CSCGD
Sbjct: 844 DIIVRDSKQVHHFKDGSCSCGD 865



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/538 (28%), Positives = 269/538 (50%), Gaps = 13/538 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F + P+R+   +N ++  Y +  L +EAL+L+  +   G+     T   VL++CG + D
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 210

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR+VH   ++ GFA +V+V  +L+ +Y +  +V   R+VFD M   + +SW ++++G
Sbjct: 211 WRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAG 270

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGG 210
           +  N   +  LELF  M  + ++PN  T ++V    G+L+D   +  A ++H + +K G 
Sbjct: 271 HFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSD---ITFAKEMHGLAVKRGF 327

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
               + CN+LI MY    M+  AR VF  M+ RD+++W +M++GY  N    +A E +  
Sbjct: 328 ATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYAL 387

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M +        T  S +  CA    L +  +LH      G      +   L+  Y+K  +
Sbjct: 388 MEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKR 447

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++ A ++F  M E KDVVSW++MI+G   N     A+ +F  M  + V+PN  T+   L 
Sbjct: 448 IDKAIEVFKCMPE-KDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALA 505

Query: 391 AQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A  A     S  ++HAH+++        +  AL++ YVK G    A   F     KD+V+
Sbjct: 506 ACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVS 565

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+ M+AG+   G+ E A+  + Q+   G  P+E TF +++ AC+      E  + FH+ +
Sbjct: 566 WNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMT 625

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
            K  +   L   + +V + S+ G +  A           D   W +++ G   H H +
Sbjct: 626 DKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVE 683



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 245/520 (47%), Gaps = 43/520 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD     + + +N ++  +  +      L LFL + +  +     T++SV    G L
Sbjct: 250 RKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLL 309

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  F +++H   VK GFA DV    SL+ +Y     +   R VF  M+  + +SWT+++
Sbjct: 310 SDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMI 369

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +N   D+ LE++  M+V  + P+  T ++ L   A  G +   V++H +    G  
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFM 429

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NAL+ MY KSK +  A  VF  M ++D ++W+SM+AG+  N  + EA   F +M
Sbjct: 430 SYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 489

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            LA  +    TF++ +  CA T  LR  +++H+ VL+ GI ++  +   L+  Y KCG+ 
Sbjct: 490 -LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQT 548

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A   F      KDVVSW  MI+G + +G  + A++FF QM + G  P+  T+      
Sbjct: 549 GYAWAQFC-AHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTF------ 601

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKDIVA---- 446
                                     ALL A  + G++ E  ++F  + D+  IV     
Sbjct: 602 -------------------------VALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKH 636

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           ++ M+   +++G    A   Y  +    + P+   + +++N C      VE G+      
Sbjct: 637 YACMVDLLSRVGQLTEA---YNFINEMPITPDAAVWGALLNGCRI-HRHVELGELAAKYV 692

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           ++ + N+A      L  +Y+  G  +  + V K  R++ L
Sbjct: 693 LELEPNDA-GYHVLLCDLYADAGIWDKLARVRKTMREKGL 731


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/512 (42%), Positives = 330/512 (64%), Gaps = 20/512 (3%)

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
           +D+ SWT++I+G+ QN   D A+     M R   +PNGFT++ +L A  A +      Q+
Sbjct: 4   RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           HA  +K ++     VG+ALL+ Y + G +D A  VF+ ++ K+ V+W+A++AG+A+ GD 
Sbjct: 64  HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 123

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           E  + ++ ++   G +   FT+SSV +A  A   A+EQGK  HA  IK+    +  V + 
Sbjct: 124 ETTLLMFAEMQRNGFEATHFTYSSVFSA-IAGIGALEQGKWVHAHMIKSGERLSAFVGNT 182

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           ++ MY+K G++  A +VF    K+DLV+WNSM+  +AQ+G  ++A+  F+EMR+  +  +
Sbjct: 183 ILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 242

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITF+ ++TAC+H GLV EG+QYFD+M  EH++ P ++HY  +VDL  RAG+L  A+  I
Sbjct: 243 QITFLSILTACSHGGLVKEGKQYFDMM-KEHNLEPEIDHYVTVVDLLGRAGLLNDALVFI 301

Query: 641 NRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQ 686
            +MP   +A VW  +L +CR+                L P D+   VLL N+YA+TG W 
Sbjct: 302 FKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWD 361

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
             ARVRK+M    VKKE   SW+E++N  + F+A D +HP+S +IY K EE+S +++ AG
Sbjct: 362 AAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAG 421

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y P+T YVL  +D++ ++A L  HSE++A+AF L+  P GA ++I+KN+R+CGDCH+  +
Sbjct: 422 YVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFR 481

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ISK+  R+IVVRDTNRFHHF  G CSCGDYW
Sbjct: 482 YISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 153/315 (48%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQV 100
           R+   +  L+  Y ++ +  EAL L LG+ R      G T +S+LK  G       G Q+
Sbjct: 4   RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN 160
           H   VK  +  DV V ++L+D+Y R   ++    VFD +   N VSW +L++G+AR    
Sbjct: 64  HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 123

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           +  L +F  MQ  G +   FT+S+V   +A  G +     VH  +IK+G  +   V N +
Sbjct: 124 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 183

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           + MY KS  + DAR VFD ++ +D +TWNSM+  +    L  EA   F  M   G  L +
Sbjct: 184 LDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 243

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
            TF+S++  C+    ++  +Q    + ++ ++ + +    ++    + G + DA      
Sbjct: 244 ITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 303

Query: 341 MREMKDVVSWTAMIS 355
           M        W A++ 
Sbjct: 304 MPMKPTAAVWGALLG 318



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 154/319 (48%), Gaps = 6/319 (1%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M+  ++ SWTSL++GYA+N M D  L L   M     KPN FTF+++L            
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            Q+H + +K        V +AL+ MY +   +  A AVFD +E ++ ++WN+++AG+   
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
                    F  M   G E T  T+ SV    A    L   + +H+ ++K+G      + 
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             ++  Y+K G M DA K+F  + + KD+V+W +M++   Q G    AV  F +M + GV
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHV-DKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 239

Query: 379 RPNGFTYSIILTA---QPAVSPFQVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEA-A 433
             N  T+  ILTA      V   + +  ++K  N E        +++   + G+L++A  
Sbjct: 240 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALV 299

Query: 434 KVFELIDEKDIVAWSAMLA 452
            +F++  +     W A+L 
Sbjct: 300 FIFKMPMKPTAAVWGALLG 318



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 99/201 (49%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++FD+   +N V +N L+  + R    +  L +F  ++R G      T SSV      + 
Sbjct: 97  AVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIG 156

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+ VH   +KSG      V  +++D+Y ++ ++ D R+VFD +++ ++V+W S+L+
Sbjct: 157 ALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLT 216

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            +A+  +    +  F  M+  G+  N  TF ++L   +  G+V    Q   M+ ++  E 
Sbjct: 217 AFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEP 276

Query: 213 VTSVCNALISMYLKSKMVRDA 233
                  ++ +  ++ ++ DA
Sbjct: 277 EIDHYVTVVDLLGRAGLLNDA 297


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/673 (35%), Positives = 374/673 (55%), Gaps = 57/673 (8%)

Query: 184 TVLGVLADEGIVATA--VQVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDG 239
           TVL +   + I +     Q+H +V+++G      V  AL+  Y          A  VF  
Sbjct: 33  TVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSS 92

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           + + +   WN ++ G + N    +A   +  M +  A   + T+ ++ K C+  + ++  
Sbjct: 93  IPNPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEG 151

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           RQ+H  V+K+GI  D +I++  +  Y+  G++EDA K+F       DVV W  MI G+L+
Sbjct: 152 RQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGES--DVVCWNTMIDGYLK 209

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL 419
            G ++ A   F QM                   P                 K+      +
Sbjct: 210 CGVLEAAKGLFAQM-------------------PV----------------KNIGSWNVM 234

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           +N   K G L +A K+F+ + E+D ++WS+M+ GY   G  + A++I++Q+  E  +P  
Sbjct: 235 INGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGR 294

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           F  SSV+ AC+    A++QG+  HA   +  +     + +AL+ MY+K G ++   EVF+
Sbjct: 295 FILSSVLAACSN-IGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
             ++R++ +WN+MI G A HG  + ALE+F +++   ++ +GIT +GV+TAC HAG VD+
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G + F  M   + + P +EHY CMVDL  R+G+  +A D+IN MP   +A VW  +L AC
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGAC 473

Query: 660 R--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           R              L+ L+P +S  YVLLSN+YA  G + + +++RKLM +R +K   G
Sbjct: 474 RIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPG 533

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            S +++    + F  GD SHPQ  +IY KL+ +  RL+ AG+ PDTS VL DID+E KE 
Sbjct: 534 VSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKET 593

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
            ++ HSE+LAIAFGL+ T  G  + IVKNLRVC DCH+  KLIS++  R+I+VRD  R+H
Sbjct: 594 AVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYH 653

Query: 826 HFKEGLCSCGDYW 838
           HFK G CSC D+W
Sbjct: 654 HFKNGTCSCKDFW 666



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 181/415 (43%), Gaps = 80/415 (19%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T  ++ K C        GRQ+H   VK G   DV++ ++ + +Y     +ED R++F   
Sbjct: 134 TYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS- 192

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-ADEGIVATA 198
            ES+VV W +++ GY +                              GVL A +G+ A  
Sbjct: 193 GESDVVCWNTMIDGYLK-----------------------------CGVLEAAKGLFA-- 221

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
                M +KN G       N +I+   K   + DAR +FD M +RD I+W+SMV GY++ 
Sbjct: 222 ----QMPVKNIGS-----WNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISA 272

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
             + EA E F  M        R    SV+  C+    +   R +H+ + +N I  D  + 
Sbjct: 273 GRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLG 332

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y+KCG+++   ++F  M+E +++ +W AMI G   +G  + A+  F ++    +
Sbjct: 333 TALLDMYAKCGRLDMGWEVFEEMKE-REIFTWNAMIGGLAIHGRAEDALELFSKLQEGRM 391

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           +PNG T   +LTA         HA                        G +D+  ++F+ 
Sbjct: 392 KPNGITLVGVLTA-------CAHA------------------------GFVDKGLRIFQT 420

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ----LTSEGVKPNEFTFSSVINAC 489
           +  ++       L  Y  + D  G   ++ +    + S  +KPN   + +++ AC
Sbjct: 421 M--REFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGAC 473



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 149/350 (42%), Gaps = 43/350 (12%)

Query: 103 ECVKSGFA----RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           E  K  FA    +++     +++   +  N+ D R++FD+M+E + +SW+S++ GY    
Sbjct: 214 EAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAG 273

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                LE+F +MQ E  +P  F  S+VL   ++ G +     VH  + +N  ++   +  
Sbjct: 274 RYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT 333

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL+ MY K   +     VF+ M++R+  TWN+M+ G   +    +A E F+ +     + 
Sbjct: 334 ALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKP 393

Query: 279 TRSTFVSVIKLCA----TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
              T V V+  CA      K LR+ + +       G+D +      ++    + G   +A
Sbjct: 394 NGITLVGVLTACAHAGFVDKGLRIFQTMREFY---GVDPELEHYGCMVDLLGRSGLFSEA 450

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             + + M    +   W A++     +G  DLA        R G         I+L  +P 
Sbjct: 451 EDLINSMPMKPNAAVWGALLGACRIHGNFDLA-------ERVG--------KILLELEPQ 495

Query: 395 VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
            S   V                  L N Y K G  D+ +K+ +L+  + I
Sbjct: 496 NSGRYV-----------------LLSNIYAKVGRFDDVSKIRKLMKNRGI 528



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD   +R+ + ++ ++  Y     ++EAL +F  ++R         LSSVL  C  +
Sbjct: 248 RKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNI 307

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR VH    ++    D  + T+L+D+Y +   ++ G  VF++M E  + +W +++
Sbjct: 308 GAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMI 367

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGG 210
            G A +   +  LELF ++Q   +KPN  T   VL   A  G V   +++  TM    G 
Sbjct: 368 GGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGV 427

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVA 253
           +        ++ +  +S +  +A  + + M  + ++  W +++ 
Sbjct: 428 DPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLG 471


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 218/578 (37%), Positives = 348/578 (60%), Gaps = 21/578 (3%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           + + ++++ C  ++ +R  RQLH+++L +G+  D  + T L+  Y+ CG +  A ++F  
Sbjct: 64  NNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDE 123

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF- 398
           M    +V  W  +I  + ++G  + A+  + +M   G + P+ FTY  +L A  A+    
Sbjct: 124 MPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLG 183

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              +VH  +++T++     V   L++ Y K G +DEA  VF+    +D V W++M+A   
Sbjct: 184 AGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACG 243

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G    A+ + R + +EG+ P   T  S I+A  A + A+ +G++ H    +    +  
Sbjct: 244 QNGRPAEALALCRNMAAEGIAPTIVTLVSAISA-AADAGALPRGRELHGYGWRRGFGSQD 302

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            + ++L+ MY+K G +  A  +F +   R+L+SWN+MICG+  HGH   A E+F+ MR +
Sbjct: 303 KLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNE 362

Query: 576 -DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  D ITF+GV++AC H G+V E ++ FD+MV  + I P ++HY+C+VD+   +G  +
Sbjct: 363 AQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFK 422

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A D+I  M     + +W  +L  C+              LI L+P D+  YVLLSN+YA
Sbjct: 423 EASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYA 482

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
            +G W+E ARVRKLM +R +KK    SWIE+K K++ FL GD SHP+S++IY +LE L  
Sbjct: 483 QSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLEG 542

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
            +   GY PDT+ V  +++D+ K  ++  HSERLAIAFGL++TP G  L + KNLRVC D
Sbjct: 543 LISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCED 602

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH VIKLIS++E+R+I++RD NR+HHF  G CSC D+W
Sbjct: 603 CHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 196/449 (43%), Gaps = 52/449 (11%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR 134
           P   +  +++L++C        GRQ+H   + SG   D  ++T LVDLY     V   RR
Sbjct: 60  PYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARR 119

Query: 135 VFDDM-NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADE 192
           +FD+M N+ NV  W  L+  YAR+   +  +EL+  M   G ++P++FT+  VL   A  
Sbjct: 120 LFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAAL 179

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             +    +VH  V++        VC  LI MY K   V +A AVFD    RD++ WNSM+
Sbjct: 180 LDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMI 239

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           A    N    EA     NM   G   T  T VS I   A    L   R+LH    + G  
Sbjct: 240 AACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFG 299

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
               ++T L+  Y+K G +  A  +F  +   ++++SW AMI G   +G  D A   F +
Sbjct: 300 SQDKLKTSLLDMYAKSGWVTVARVLFDQLFH-RELISWNAMICGFGMHGHADHACELFRR 358

Query: 373 MTREG-VRPNGFTYSIILTA-------QPAVSPFQ--VHAHIIKTNYEKSFSVGTALLNA 422
           M  E  V P+  T+  +L+A       Q A   F   V  + IK   +      T L++ 
Sbjct: 359 MRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHY----TCLVDV 414

Query: 423 YVKKGILDEAAKVFE-LIDEKDIVAWSAMLAG---------------------------- 453
               G   EA+ V + ++ + D   W A+L G                            
Sbjct: 415 LGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNY 474

Query: 454 ------YAQIGDTEGAVKIYRQLTSEGVK 476
                 YAQ G  E A ++ + +T+ G+K
Sbjct: 475 VLLSNIYAQSGKWEEAARVRKLMTNRGLK 503



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 151/339 (44%), Gaps = 4/339 (1%)

Query: 32  QSLFDRSP-QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCG 89
           + LFD  P Q N   +N L+  Y RD   + A+ L+  +   G +     T   VLK C 
Sbjct: 118 RRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACA 177

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L D   GR+VH   +++ +A DV V   L+D+Y +   V++   VFD     + V W S
Sbjct: 178 ALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNS 237

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++   +N      L L   M  EGI P   T  + +   AD G +    ++H    + G
Sbjct: 238 MIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRG 297

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 +  +L+ MY KS  V  AR +FD +  R+ I+WN+M+ G+  +     A E F 
Sbjct: 298 FGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFR 357

Query: 270 NM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHS-QVLKNGIDFDHNIRTGLMVAYSK 327
            M   A       TFV V+  C     ++ A+++    V    I       T L+     
Sbjct: 358 RMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGH 417

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            G+ ++AS +   M    D   W A+++G   +  ++LA
Sbjct: 418 SGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELA 456


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/657 (36%), Positives = 375/657 (57%), Gaps = 53/657 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VF  +++ + + WN+M+ GY  +   + A + +  M   G      TF  ++K CA 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF-------------- 338
           +K     +Q+H  VLK G + D  + T L+  Y++ G++EDA K+F              
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 339 --------------SMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                          M  E+  KDVVSW AMISG+ + G+   A+  F +M +  VRP+ 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T   +L+A           QVH+ I    +  +  +  AL++ Y K G ++ A  +FE 
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD+V+W+ ++ GY  +   + A+ +++++   G  PN+ T  S++ AC A   A++ 
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPAC-AHLGAIDI 317

Query: 499 GKQFHACSIKAKL---NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           G+  H   I  KL    NA  + ++L+ MY+K G+IE+A +VF     + L SWN+MI G
Sbjct: 318 GRWIHV-YIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           +A HG      ++F  MR+  +E D ITF+G+++AC+H+G +D G+  F  M  ++ I P
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            +EHY CM+DL   +G+ ++A ++I  MP      +W ++L ACR              L
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + ++P +   YVLLSN+YA  G W E A+VR L+N + +KK  G S IE+ ++ + F+ G
Sbjct: 497 MKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVG 556

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D  HP++ +IY  LEE+   L++AG+ PDTS VLQ++++E KE  L  HSE+LAIAFGL+
Sbjct: 557 DKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 616

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +T  G  L IVKNLRVC +CH   KL+SK+ +R+I+ RD  RFHHF++G+CSC D+W
Sbjct: 617 STKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 230/496 (46%), Gaps = 41/496 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F    + N + +N +L  Y   S    AL L++ +  LGL     T   +LK+C    
Sbjct: 21  SVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSK 80

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+Q+H   +K G+  D+ V TSL+ +Y +   +ED  +VFD  +  +VVS+T+L++
Sbjct: 81  AFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALIT 140

Query: 153 GYARN-------KMNDRV------------------------LELFHRMQVEGIKPNSFT 181
           GYA +       +M D +                        LELF  M    ++P+  T
Sbjct: 141 GYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGT 200

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             TVL   A    V    QVH+ +  +G      + NALI +Y K   V  A  +F+G+ 
Sbjct: 201 MVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLS 260

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D ++WN+++ GY    L+ EA   F  M  +G      T VS++  CA    + + R 
Sbjct: 261 CKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRW 320

Query: 302 LHSQVLKNGIDFDH--NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   D  +  ++RT L+  Y+KCG +E A ++F+ M   K + SW AMI G   
Sbjct: 321 IHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLH-KSLSSWNAMIFGFAM 379

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYEKSFSVG 416
           +G  +   + F +M + G+ P+  T+  +L+A        +  HI K+   +Y+ +  + 
Sbjct: 380 HGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLE 439

Query: 417 --TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS- 472
               +++     G+  EA ++ + +  E D V W ++L    + G+ E A    R L   
Sbjct: 440 HYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKV 499

Query: 473 EGVKPNEFTFSSVINA 488
           E   P  +   S I A
Sbjct: 500 EPENPGSYVLLSNIYA 515



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 222/486 (45%), Gaps = 41/486 (8%)

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           VF  + E N + W ++L GYA +      L+L+  M   G+ PNS+TF  +L   A    
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR----------- 243
                Q+H  V+K G E    V  +LISMY ++  + DA  VFD    R           
Sbjct: 82  FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141

Query: 244 --------------------DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
                               D ++WN+M++GY     + EA E F  M          T 
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           V+V+  CA ++ + L RQ+HS +  +G   +  I   L+  YSKCG++E A  +F  +  
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGL-S 260

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---- 399
            KDVVSW  +I G+        A+  F +M R G  PN  T   IL A   +        
Sbjct: 261 CKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRW 320

Query: 400 VHAHIIK--TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           +H +I K   +   + S+ T+L++ Y K G ++ A +VF  +  K + +W+AM+ G+A  
Sbjct: 321 IHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMH 380

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALC 516
           G       ++ ++   G++P++ TF  +++AC+  S  ++ G+  F + +    +   L 
Sbjct: 381 GRANAGFDLFSRMRKNGIEPDDITFVGLLSACSH-SGKLDLGRHIFKSMTQDYDITPKLE 439

Query: 517 VSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
               ++ +    G  + A E+ K    + D V W S++    +HG+ + A    + + + 
Sbjct: 440 HYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKV 499

Query: 576 DLEFDG 581
           + E  G
Sbjct: 500 EPENPG 505



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 159/344 (46%), Gaps = 9/344 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +FD  P ++ V +N ++  Y     ++EAL LF  + +  +     T+ +VL  C   
Sbjct: 152 QEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQS 211

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQVH      GF  ++ +  +L+DLY +   VE    +F+ ++  +VVSW +L+
Sbjct: 212 RSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLI 271

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY    +    L LF  M   G  PN  T  ++L   A  G +     +H  + K   +
Sbjct: 272 GGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKD 331

Query: 212 VVT--SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
           V    S+  +LI MY K   +  A  VF+ M  +   +WN+M+ G+  +      F+ F+
Sbjct: 332 VTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFS 391

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT---GLMV-AY 325
            M   G E    TFV ++  C+ + +L L R +   + +   D+D   +    G M+   
Sbjct: 392 RMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ---DYDITPKLEHYGCMIDLL 448

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
              G  ++A ++   M    D V W +++    ++G ++LA +F
Sbjct: 449 GHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESF 492


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/742 (31%), Positives = 420/742 (56%), Gaps = 23/742 (3%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           T  +  Y+    +++   +F++M + +   W  ++ G+  N +    ++ +HRM+  G++
Sbjct: 64  TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
            ++FT+  V+        +A   +VH  VIK+G ++   + N+LI MY K   +  A  V
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           F  M  RD ++WNSM++GYV+      +   F  M  +G +L R + + ++  C+    L
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           R  +++H Q++++ ++ D  ++T L+  Y+KCG+M+ A ++F  + + K +V+W AMI G
Sbjct: 244 RNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITD-KSIVAWNAMIGG 302

Query: 357 HLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
           +  N     +  +  +M   G + P+  T   +L     +        VH   I+  +  
Sbjct: 303 YSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLP 362

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              + TAL++ Y + G L  A  +F  ++E+++++W+AM+A Y + G+   A+ +++ L 
Sbjct: 363 HLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLC 422

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
           ++ +KP+  T +S++ A  A  A++ + +Q H    K KL++   VS+++V MY K GN+
Sbjct: 423 NKTLKPDATTIASILPA-YAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNL 481

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
             A E+F R   +D++SWN++I  YA HG  + ++E+F EMR +  E +G TF+ ++ +C
Sbjct: 482 LRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSC 541

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           + AGLV+EG +YF+ M  +++I P +EHY C++DL  R G L+ A + I  MP A +A +
Sbjct: 542 SVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARI 601

Query: 652 WRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
           W ++L A R              ++SL+  ++  YVLLSNMYA  G W++  R++  M  
Sbjct: 602 WGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKK 661

Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD-TSYVLQ 756
             ++K  G S +++ +KT+ F+  D S  + N +Y  L+ +S ++ +  Y    T +   
Sbjct: 662 EGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPS 721

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D++ +   +  S HS RLAI FGL++T  G P+ + KN+R+C  CH   K IS+  +R+I
Sbjct: 722 DLEKKRANSAKS-HSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRISETTKREI 780

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           +VRD+  FHHF  G CSCGDYW
Sbjct: 781 IVRDSKIFHHFNGGHCSCGDYW 802



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 256/513 (49%), Gaps = 6/513 (1%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y K    LF+   Q +   +N ++  +  + L  +A++ +  +   G+     T   V+K
Sbjct: 75  YMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIK 134

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            CG L+D   G +VH + +KSG   D+ +  SL+ +Y +   +E    VF +M   ++VS
Sbjct: 135 ACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVS 194

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W S++SGY       R L  F  MQ  GIK + F+   +LG  + EG +    ++H  ++
Sbjct: 195 WNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMM 254

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           ++  E+   V  +L+ MY K   +  A  +FD + D+  + WN+M+ GY  N    E+F 
Sbjct: 255 RSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFA 314

Query: 267 TFNNMGLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
               M   G       T ++++  CA  + + L + +H   ++NG      + T L+  Y
Sbjct: 315 YVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMY 374

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            +CGK++ A  +F  M E ++++SW AMI+ + +NG    A+  F  +  + ++P+  T 
Sbjct: 375 GECGKLKPAECLFGQMNE-RNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTI 433

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + IL A   ++      Q+H ++ K   + +  V  +++  Y K G L  A ++F+ +  
Sbjct: 434 ASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTF 493

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           KD+++W+ ++  YA  G    +++++ ++  +G +PN  TF S++ +C+      E  + 
Sbjct: 494 KDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEY 553

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           F++      +N  +     ++ +  + GN++ A
Sbjct: 554 FNSMKRDYNINPGIEHYGCILDLIGRTGNLDHA 586


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/454 (45%), Positives = 304/454 (66%), Gaps = 15/454 (3%)

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+HAH IK  ++    V + +L+ Y+K G +  A  VF  I   D VAW++M++G    G
Sbjct: 51  QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 110

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
           + + A++IY ++    V P+E+TF+++I A +  +A +EQG+Q HA  IK    +   V 
Sbjct: 111 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA-LEQGRQLHANVIKLDCVSDPFVG 169

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           ++LV MY+K GNIE A  +FK+   R++  WN+M+ G AQHG+ ++A+ +FK M+   +E
Sbjct: 170 TSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIE 229

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D ++FIG+++AC+HAGL  E  +Y   M N++ I P +EHYSC+VD   RAG++++A  
Sbjct: 230 PDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADK 289

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           +I  MPF ASA++ R +L ACR              L +L+P DSA YVLLSN+YAA   
Sbjct: 290 VIETMPFKASASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANR 349

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W +    RK+M  + VKK+ G+SWI+VKN  + F+  D SHPQ++ IY K+EE+   +++
Sbjct: 350 WDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRE 409

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            GY PDT +VL D++DE KE  L  HSE+LAIA+GL++TPA   ++++KNLRVCGDCH  
Sbjct: 410 DGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNA 469

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           IK ISK+  R+IV+RD NRFHHF++G+CSCGDYW
Sbjct: 470 IKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 503



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 164/309 (53%), Gaps = 5/309 (1%)

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           M+ GY+      +A E F+ +  +G +  + T  +  K C     L   +Q+H+  +K G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
            D D ++ +G++  Y KCG M +A  +F+ +    D V+WT+MISG + NG  D A+  +
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDD-VAWTSMISGCVDNGNEDQALRIY 119

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M +  V P+ +T++ ++ A   V+      Q+HA++IK +      VGT+L++ Y K 
Sbjct: 120 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 179

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G +++A ++F+ ++ ++I  W+AML G AQ G+ E AV +++ + S G++P+  +F  ++
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 239

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           +AC+      E  +  H+      +   +   S LV    + G ++ A +V +    +  
Sbjct: 240 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 299

Query: 547 VSWNSMICG 555
            S N  + G
Sbjct: 300 ASINRALLG 308



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 151/294 (51%), Gaps = 1/294 (0%)

Query: 49  LLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSG 108
           ++F Y   +  ++AL LF  I + G      TL++  K CGCL     G+Q+H   +K+G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 109 FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
           F  D++V++ ++D+Y++  ++ +   VF+ ++  + V+WTS++SG   N   D+ L ++H
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
           RM+   + P+ +TF+T++   +    +    Q+H  VIK        V  +L+ MY K  
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            + DA  +F  M  R+   WN+M+ G   +    EA   F +M   G E  R +F+ ++ 
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 289 LCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
            C+       A + LHS     GI+ +    + L+ A  + G +++A K+   M
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 294



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 8/221 (3%)

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GY    D + A++++  +   G K ++ T ++   AC      ++QGKQ HA +IKA
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCL-VLLDQGKQIHAHAIKA 59

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             ++ L V+S ++ MY K G++ +A  VF      D V+W SMI G   +G+  +AL ++
Sbjct: 60  GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIY 119

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             MR+  +  D  TF  +I A +    +++G+Q    ++    +       S +VD+Y++
Sbjct: 120 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTS-LVDMYAK 178

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSA 670
            G +E A  +  +M       V    L    L+ L  H +A
Sbjct: 179 CGNIEDAYRLFKKM------NVRNIALWNAMLVGLAQHGNA 213


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/673 (36%), Positives = 375/673 (55%), Gaps = 25/673 (3%)

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           V+   A  G +A   ++H ++ + G      V N L+ MY K   + +AR VF+    ++
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-LRLARQLH 303
             +W  ++     +    EA   F  M   G +    +F + I  C+   E L   R LH
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           + + + G        T L+  YSKCG +E++ K F  M E+ + VSW AMI+   ++   
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTEL-NAVSWNAMIAAFAEHRRG 218

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTA--QPAV--SPFQVHAHIIKTNYEKSFSVGTAL 419
             A+    +M  EG+R    TY  +++A  QP+   S   +H  I++T +++   V   +
Sbjct: 219 LEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQD--VVNVI 276

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           LN Y K G L +A  +F+ + + D++AW+ M+A Y+Q G T  A++ Y  +  EGV P++
Sbjct: 277 LNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDD 336

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           +T+ SVI+AC A    +E GKQ H   +  +      ++++LV MY K G ++ A  +F 
Sbjct: 337 YTYVSVIDAC-ATLGDMEVGKQVHR-RLGDRAFQVTELANSLVNMYGKCGILDVARSIFD 394

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
           +  K   V+WN+MI  YAQH H ++A E+F  MR    E   ITF+ V++AC +AGL +E
Sbjct: 395 KTAKGS-VTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEE 453

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
              YF  M  +H + P   HY CMV+   +AG L  A  +I  MPF      W + LA C
Sbjct: 454 AHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANC 513

Query: 660 R--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           R               I + P  S  YV L+ ++A  G +QE +R+RKLM DR ++K AG
Sbjct: 514 RSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAG 573

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            S I++    Y F AGD S+P+S +I+ +L+ L   +K AGY PD ++V  D++   KE 
Sbjct: 574 RSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEP 633

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
           +L  HSERLAIAFG+++T  G PL+I+KNLRVCGDCH + KL SK+ RR+I+VRD+NRFH
Sbjct: 634 LLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFH 693

Query: 826 HFKEGLCSCGDYW 838
           HFK G CSC D+W
Sbjct: 694 HFKNGSCSCKDFW 706



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 251/505 (49%), Gaps = 19/505 (3%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           V+++C  L     GR++H    + G   DV VS  LV +Y +  ++E+ R VF+     N
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-ADEGIVATAVQVH 202
           V SWT L++  A++  +   L LF+ M  +GI+P+S +F+  +    A    +     +H
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
            ++ + G +       +L+SMY K   + ++   F+ M + ++++WN+M+A +  +   +
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGL 219

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EA  T   M L G      T+++++       +L+ AR +H  +L+ G  FD ++   ++
Sbjct: 220 EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTG--FDQDVVNVIL 277

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KCG ++DA  +F  M +  DV++W  MI+ + Q+G    A+ F+  M  EGV P+ 
Sbjct: 278 NMYGKCGCLQDAEAMFKSMSQ-PDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDD 336

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV---GTALLNAYVKKGILDEAAKVFELI 439
           +TY  ++ A   +   +V   + +   +++F V     +L+N Y K GILD A  +F+  
Sbjct: 337 YTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELANSLVNMYGKCGILDVARSIFDKT 396

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             K  V W+AM+  YAQ    + A +++  +  +G +P+  TF SV++AC A +   E+ 
Sbjct: 397 -AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSAC-ANAGLPEEA 454

Query: 500 KQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
             +  C      ++    +  C+  +L     K G +  A  + +    + D+++W S +
Sbjct: 455 HSYFVCMQQDHGVRPGGGHYGCMVESL----GKAGRLSDAEALIQGMPFEPDVLTWTSFL 510

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLE 578
                HG  K+     K   R D E
Sbjct: 511 ANCRSHGDMKRGKFAAKGAIRIDPE 535



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 204/380 (53%), Gaps = 13/380 (3%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           V VI+ CA    L   R++H  + + G+  D  +   L++ Y KCG +E+A  +F     
Sbjct: 38  VRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEAT-P 96

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----- 398
            K+V SWT +I+   Q+G    A+  F +M ++G++P+  +++  + A  A   F     
Sbjct: 97  AKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGR 156

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            +HA + +  ++ +    T+L++ Y K G L+E+ K FE + E + V+W+AM+A +A+  
Sbjct: 157 ALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHR 216

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A++  +++  EG++    T+ ++++A   PS  ++  +  H C ++   +    V 
Sbjct: 217 RGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPS-QLKSARYIHDCILRTGFDQD--VV 273

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           + ++ MY K G ++ A  +FK   + D+++WN+MI  Y+QHGHT +AL  ++ M+ + + 
Sbjct: 274 NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVV 333

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D  T++ VI AC   G ++ G+Q    + +    +   E  + +V++Y + G+L+ A  
Sbjct: 334 PDDYTYVSVIDACATLGDMEVGKQVHRRLGDR--AFQVTELANSLVNMYGKCGILDVARS 391

Query: 639 IINRMPFAASATVWRTVLAA 658
           I ++   A  +  W  ++ A
Sbjct: 392 IFDKT--AKGSVTWNAMIGA 409



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 211/447 (47%), Gaps = 19/447 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+ +P +N   +  L+    +    QEAL LF  + + G+     + ++ +  C    +
Sbjct: 91  VFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPE 150

Query: 94  HV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            +  GR +H    + GF   V  +TSLV +Y +  ++E+  + F+ M E N VSW ++++
Sbjct: 151 FLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIA 210

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            +A ++     L    +M +EGI+  S T+ T++        + +A  +H  +++ G + 
Sbjct: 211 AFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFD- 269

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V N +++MY K   ++DA A+F  M   D I WN+M+A Y  +    EA   +  M 
Sbjct: 270 -QDVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQ 328

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G      T+VSVI  CAT  ++ + +Q+H ++          +   L+  Y KCG ++
Sbjct: 329 EEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVT-ELANSLVNMYGKCGILD 387

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
            A  IF   +  K  V+W AMI  + Q+     A   F  M  +G  P+  T+  +L+A 
Sbjct: 388 VARSIFD--KTAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSAC 445

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTA----LLNAYVKKGILDEAAKVFELID-EKDIVA 446
             A  P + H++ +    +     G      ++ +  K G L +A  + + +  E D++ 
Sbjct: 446 ANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLT 505

Query: 447 WSAMLAGYAQIGD-------TEGAVKI 466
           W++ LA     GD        +GA++I
Sbjct: 506 WTSFLANCRSHGDMKRGKFAAKGAIRI 532



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F    Q + + +N ++  Y +     EAL  +  ++  G+     T  SV+  C  L
Sbjct: 290 EAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATL 349

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G+QVH       F +   ++ SLV++Y +   ++  R +FD   + + V+W +++
Sbjct: 350 GDMEVGKQVHRRLGDRAF-QVTELANSLVNMYGKCGILDVARSIFDKTAKGS-VTWNAMI 407

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA------VQVHTMV 205
             YA++    +  ELF  M+++G +P+  TF +VL   A+ G+   A      +Q    V
Sbjct: 408 GAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGV 467

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
              GG         ++    K+  + DA A+  GM  + D +TW S +A
Sbjct: 468 RPGGGHY-----GCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLA 511


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/639 (37%), Positives = 361/639 (56%), Gaps = 23/639 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LI++Y+K   +  AR VFD M  R+ ++ N +++GY ++  H +A        +A   
Sbjct: 54  NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLR---VADFG 110

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L      S +   A  +   + RQ H   +K G+     + + ++  Y +C  M++A K+
Sbjct: 111 LNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKV 170

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQP 393
           F  +    +V ++ +MI+G L  G +D + +    M R   + +  +Y  +L    + + 
Sbjct: 171 FDNVSSF-NVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKE 229

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            V   QVH   +K   E +  VG+AL++ Y K     EA +VFE++ EK+IV+W+A++  
Sbjct: 230 VVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTA 289

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    E A++++  +  EGV+PNEFT++  +N+C A  A ++ G    AC++K     
Sbjct: 290 YTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC-AGLATLKNGNALGACTMKTGHWG 348

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            L V +AL+ MYSK G++E A  VF     RD+VSWNS+I GYA HG  ++A+E F +M 
Sbjct: 349 LLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDML 408

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
             +     +TFIGV++AC   GLVDEG  Y +IM+ E  + P  EHY+CMV L  R G L
Sbjct: 409 FAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRL 468

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
           ++A   I           WR++L++C+              +  L+P D   YVLLSNMY
Sbjct: 469 DEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMY 528

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A    W    +VR+LM +  V+KE G SWI+V ++ + F + D  HP   QI  KL+EL 
Sbjct: 529 AKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELI 588

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            ++K  GY P+ +  L D++DE KE  L  HSE+LA+AFGL+ TP G  ++I+KN+R+C 
Sbjct: 589 DKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICD 648

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH  IKLIS    R IVVRDT RFH  ++G+CSC DYW
Sbjct: 649 DCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 687



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 244/496 (49%), Gaps = 25/496 (5%)

Query: 96  FGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            G+ VH   V++  AR DV    +L+ LY++   +   R+VFD M   N VS   L+SGY
Sbjct: 34  LGKAVHARVVRA--ARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGY 91

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A +  +   L L   ++V     N +  S+ +   A         Q H   IK G     
Sbjct: 92  ASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            VC+A++ MY +   + +A  VFD +   +   +NSM+ G++       +     +M   
Sbjct: 149 YVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRN 208

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
             +    ++V+V+  CA+TKE+ L  Q+H+Q LK  ++ +  + + L+  Y KC    +A
Sbjct: 209 VGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEA 268

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
           +++F ++ E K++VSWTA+++ + QN   + A+  F  M  EGVRPN FTY++ L +   
Sbjct: 269 NRVFEVLPE-KNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAG 327

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           ++  +    + A  +KT +     V  AL+N Y K G +++A +VF  +  +D+V+W+++
Sbjct: 328 LATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSI 387

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HAC 505
           + GYA  G    A++ +  +      P+  TF  V++AC A    V++G  +        
Sbjct: 388 IIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSAC-AQLGLVDEGFYYLNIMMKEV 446

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICG---YAQHGH 561
            +K    +  C    +V +  + G ++ A    +      D+V+W S++     Y  +G 
Sbjct: 447 GVKPGKEHYTC----MVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGL 502

Query: 562 TKKALEVFKEMRRQDL 577
             +  E   +++ +D+
Sbjct: 503 GHRVAEQIFQLKPKDV 518



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 149/277 (53%), Gaps = 7/277 (2%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           +VL  C    + V G QVH + +K     +V V ++LVD+Y + +   +  RVF+ + E 
Sbjct: 219 AVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEK 278

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           N+VSWT++++ Y +N++ +  L+LF  M++EG++PN FT++  L   A    +     + 
Sbjct: 279 NIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALG 338

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
              +K G   +  VCNAL++MY KS  V DAR VF  M  RD ++WNS++ GY  +    
Sbjct: 339 ACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAR 398

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ----LHSQVLKNGIDFDHNIR 318
           EA E F++M  A    +  TF+ V+  CA   +L L  +    L+  + + G+       
Sbjct: 399 EAMEAFHDMLFAEEVPSYVTFIGVLSACA---QLGLVDEGFYYLNIMMKEVGVKPGKEHY 455

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           T ++    + G++++A +         DVV+W +++S
Sbjct: 456 TCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLS 492



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 199/441 (45%), Gaps = 38/441 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P RN V  N L+  Y     H++AL L L +   GL  +   LSS +     +
Sbjct: 70  RQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL-LRVADFGLNEY--VLSSAVAATAHV 126

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             +  GRQ H   +K+G A    V ++++ +Y +  ++++  +VFD+++  NV ++ S++
Sbjct: 127 RSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMI 186

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+      D    +   M     + +  ++  VLG  A    V    QVHT  +K   E
Sbjct: 187 NGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLE 246

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V +AL+ MY K     +A  VF+ + +++ ++W +++  Y  NEL  +A + F +M
Sbjct: 247 LNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDM 306

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            + G      T+   +  CA    L+    L +  +K G      +   LM  YSK G +
Sbjct: 307 EMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSV 366

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM------------------ 373
           EDA ++F  M   +DVVSW ++I G+  +G    A+  F  M                  
Sbjct: 367 EDARRVFLSM-PCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSA 425

Query: 374 -TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
             + G+   GF Y  I+  +  V P + H               T ++    + G LDEA
Sbjct: 426 CAQLGLVDEGFYYLNIMMKEVGVKPGKEHY--------------TCMVGLLCRVGRLDEA 471

Query: 433 AKVFEL-IDEKDIVAWSAMLA 452
            +  E      D+VAW ++L+
Sbjct: 472 ERFIESNCIGTDVVAWRSLLS 492


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/828 (30%), Positives = 436/828 (52%), Gaps = 79/828 (9%)

Query: 61   EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSL 119
            + L  F+ ++  G+      L+ V + C  L     G  +H   +K G    D  V ++L
Sbjct: 507  KVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSAL 566

Query: 120  VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
            +  Y R  +++   ++FD+M + + ++W  ++    ++   ++ ++LF  M+  G K   
Sbjct: 567  MGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYD 626

Query: 180  FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
             T   +L V +++   A   Q+H  V++ G E   S+CN+LI MY ++  +  +R VF+ 
Sbjct: 627  STMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNS 686

Query: 240  MEDR-----------------------------------DSITWNSMVAGYVTNELHMEA 264
            M DR                                   D +TWNS+++GY +  L  +A
Sbjct: 687  MVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDA 746

Query: 265  FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
                  + +AG +   S+  S+++       ++L + +H  V++N + +D  + T L+  
Sbjct: 747  IAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDM 806

Query: 325  YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
            Y K G +  A  +F MM E K++V+W ++ISG    G +  A     +M +EG++ N  T
Sbjct: 807  YIKTGYLPYARMVFDMMDE-KNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVT 865

Query: 385  YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
            ++ +++          +A   KT  EK+ +V    +    K G+            E ++
Sbjct: 866  WNSLVSG---------YATWGKT--EKALAV----VGKMKKNGV------------EPNV 898

Query: 445  VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
            V+W+A+L+G ++ G+    +KI+ ++  EGV PN  T SS++      S  +  GK+ H+
Sbjct: 899  VSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLS-LLYSGKEVHS 957

Query: 505  CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
              +K  L     V++ALV MY+K G+++SA+E+F   + + L SWN MI GYA     ++
Sbjct: 958  FCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEE 1017

Query: 565  ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
             + VF  M    +E D ITF  V++ C ++GLV EG +YFD+M + + + PT+EH SCMV
Sbjct: 1018 GIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMV 1077

Query: 625  DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSA 670
            +L  R+G L++A D I  MP    AT+W   L++C              RL  L+PH+SA
Sbjct: 1078 ELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSA 1137

Query: 671  IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
             Y+++ N+Y+    W +  R+R  M++ +V+ +  +SWI++    + F A   +HP   +
Sbjct: 1138 NYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGE 1197

Query: 731  IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
            IY +L +L + +K +GY PDT  + Q++ +  KE +L  H+E+LA+ +GL+     AP++
Sbjct: 1198 IYFELYKLVSEMKKSGYMPDTRCIHQNVSESEKEKLLMGHTEKLAMTYGLIKKKGIAPIR 1257

Query: 791  IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +VKN  +C DCHTV K IS L  R+IV+++  R HHF++G CSC + W
Sbjct: 1258 VVKNTNLCSDCHTVAKYISVLRNREIVLQEGARVHHFRDGKCSCNNSW 1305



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 254/569 (44%), Gaps = 78/569 (13%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            +FD  P+R+ + +N ++    +    ++A+ LF  +R  G   + ST+  +L+ C     
Sbjct: 582  IFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEG 641

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL-- 151
               GRQ+H   ++ GF  +V++  SL+ +Y R   +E  R+VF+ M + N+ SW S++  
Sbjct: 642  FAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSS 701

Query: 152  ---------------------------------SGYARNKMNDRVLELFHRMQVEGIKPN 178
                                             SGYA   ++   + +  R+Q+ G+KPN
Sbjct: 702  YTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPN 761

Query: 179  SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
            + + S++L  + + G+V     +H  VI+N       V   LI MY+K+  +  AR VFD
Sbjct: 762  TSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 821

Query: 239  GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
             M++++ + WNS+++G                                    + T  L+ 
Sbjct: 822  MMDEKNIVAWNSLISG-----------------------------------LSYTGLLKE 846

Query: 299  ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE---MKDVVSWTAMIS 355
            A  L S++ K GI  +      L+  Y+  GK E A  +   M++     +VVSWTA++S
Sbjct: 847  AEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILS 906

Query: 356  GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
            G  +NG     +  F +M  EGV PN  T S +L     +S      +VH+  +K N  +
Sbjct: 907  GCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTR 966

Query: 412  SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
               V TAL++ Y K G L  AA++F  I  K + +W+ M+ GYA     E  + ++  + 
Sbjct: 967  DAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAML 1026

Query: 472  SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
              G++P+  TF+SV++ C       E  K F        +   +   S +V +  + G +
Sbjct: 1027 EAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYL 1086

Query: 532  ESASEVFKRQR-KRDLVSWNSMICGYAQH 559
            + A +  +    K D   W + +     H
Sbjct: 1087 DEAWDFIRTMPLKPDATIWGAFLSSCKIH 1115



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 106/480 (22%), Positives = 201/480 (41%), Gaps = 73/480 (15%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCR-----------------------------------D 56
            + +F+    RN   +N ++  Y R                                    
Sbjct: 681  RKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASK 740

Query: 57   SLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVS 116
            +L ++A+ +   I+  GL    S++SS+L+          G+ +H   +++    DV V 
Sbjct: 741  ALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVE 800

Query: 117  TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            T+L+D+Y++T  +   R VFD M+E N+V+W SL+SG +   +      L  RM+ EGIK
Sbjct: 801  TTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIK 860

Query: 177  PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
             N+ T+++++   A  G    A+ V   + KNG E                         
Sbjct: 861  SNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEP------------------------ 896

Query: 237  FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
                   + ++W ++++G   N       + F  M   G     +T  S++++      L
Sbjct: 897  -------NVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLL 949

Query: 297  RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
               +++HS  LKN +  D ++ T L+  Y+K G ++ A++IF  ++  K + SW  MI G
Sbjct: 950  YSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKN-KPLASWNCMIMG 1008

Query: 357  HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYE--K 411
            +      +  +  F  M   G+ P+  T++ +L+       V     +  +++++Y    
Sbjct: 1009 YAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIP 1068

Query: 412  SFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            +    + ++    + G LDEA      +  K D   W A L+      D E A   +++L
Sbjct: 1069 TIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRL 1128



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 52/140 (37%), Gaps = 23/140 (16%)

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK-KALEVFKEMRRQ 575
           +S  L+T Y + G    AS VF     R+ VSW   +      G  K K LE F  ++ +
Sbjct: 459 ISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNK 518

Query: 576 DLEFDGITFIGVITACT-----------HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
            + FD +    V   C            H GL+  G    D  V            S ++
Sbjct: 519 GVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRV-----------VSALM 567

Query: 625 DLYSRAGMLEKAMDIINRMP 644
             Y R   L+ A  I + MP
Sbjct: 568 GFYGRCVSLDLANKIFDEMP 587


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/759 (33%), Positives = 408/759 (53%), Gaps = 24/759 (3%)

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
           V+ N  + ++C     + A+ L    +R  L L  +T  SVL+ C  L     G++VH  
Sbjct: 25  VDKNAKICKFCEMGDLRNAMKLLSRSQRSELEL--NTYCSVLQLCAELKSLEDGKRVHSI 82

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
              +G A D  +   LV +Y+   ++  GRR+FD +    +  W  L+S YA+       
Sbjct: 83  ISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRES 142

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           + LF +MQ  GI+ +S+TF+ VL   A    V    +VH  V+K G     +V N+LI+ 
Sbjct: 143 VGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAA 202

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K   V  AR +FD + DRD ++WNSM++G   N       E F  M   G ++  +T 
Sbjct: 203 YFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATL 262

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           V+V+  CA    L L R LH+  +K G          L+  YSKCG +  A+++F  M E
Sbjct: 263 VNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGE 322

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
              +VSWT++I+ H++ G    A+  F +M  +G+RP+ +  + ++ A    +      +
Sbjct: 323 -TTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGRE 381

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           VH HI K N   +  V  AL+N Y K G ++EA  +F  +  K+IV+W+ M+ GY+Q   
Sbjct: 382 VHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSL 441

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
              A++++  +  + +KP++ T + V+ AC A  AA+E+G++ H   ++    + L V+ 
Sbjct: 442 PNEALQLFLDMQKQ-LKPDDVTMACVLPAC-AGLAALEKGREIHGHILRKGYFSDLHVAC 499

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           ALV MY K G +  A ++F    K+D++ W  MI GY  HG  K+A+  F++MR   +E 
Sbjct: 500 ALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEP 559

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           +  +F  ++ ACTH+GL+ EG + FD M +E +I P +EHY+CMVDL  R+G L +A   
Sbjct: 560 EESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKF 619

Query: 640 INRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHW 685
           I  MP    A +W  +L+ CR              +  L+P ++  YVLL+N+YA    W
Sbjct: 620 IETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKW 679

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
           +E  ++++ ++   +K + G SWIEV+ K   F AGD SHPQ+  I S L +L+ ++   
Sbjct: 680 EEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRG 739

Query: 746 GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           GY     Y L + DD  KE +L  HSE+LA+   + ATP
Sbjct: 740 GYSNKIKYALINADDRLKEVLLCAHSEKLAM-LQVDATP 777



 Score =  249 bits (636), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 160/548 (29%), Positives = 273/548 (49%), Gaps = 15/548 (2%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + +FD         +N L+ EY +   ++E++ LF  ++ LG+     T + VLK   
Sbjct: 110 KGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFA 169

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
                   ++VH   +K GF     V  SL+  Y +   VE  R +FD++++ +VVSW S
Sbjct: 170 ASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNS 229

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++SG   N  +   LE F +M   G+  +S T   VL   A+ G +     +H   +K G
Sbjct: 230 MISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAG 289

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                   N L+ MY K   +  A  VF  M +   ++W S++A +V   LH EA   F+
Sbjct: 290 FSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFD 349

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G         SV+  CA +  L   R++H+ + KN +  +  +   LM  Y+KCG
Sbjct: 350 EMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCG 409

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ME+A+ IFS +  +K++VSW  MI G+ QN   + A+  F  M ++ ++P+  T + +L
Sbjct: 410 SMEEANLIFSQL-PVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMACVL 467

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   ++      ++H HI++  Y     V  AL++ YVK G+L  A ++F++I +KD++
Sbjct: 468 PACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMI 527

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA- 504
            W+ M+AGY   G  + A+  + ++   G++P E +F+S++ ACT      E  K F + 
Sbjct: 528 LWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSM 587

Query: 505 ---CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
              C+I+ KL +  C+   L+    + GN+  A +  +    K D   W +++ G   H 
Sbjct: 588 KSECNIEPKLEHYACMVDLLI----RSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHH 643

Query: 561 HTKKALEV 568
             + A +V
Sbjct: 644 DVELAEKV 651


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/729 (32%), Positives = 417/729 (57%), Gaps = 23/729 (3%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            ++L  R    + V +N ++  Y +  L  E   L+  ++R GL    ST +S+L     +
Sbjct: 281  RTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASM 340

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 G+Q+H   VK G   +V V +SL++LY++   + D ++VFD   E N+V W ++L
Sbjct: 341  TAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAML 400

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             G+ +N + +  +++F  M+   ++ + FTF +VLG   +   +    QVH + IKN  +
Sbjct: 401  YGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMD 460

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                V NA++ MY K   +  A+A+F  +  +DS++WN+++ G   NE   EA      M
Sbjct: 461  ADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRM 520

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
               G      +F + I  C+  +     +Q+H   +K  +  +H + + L+  YSK G +
Sbjct: 521  KCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDV 580

Query: 332  EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            E + K+ + + +   +V   A+I+G +QN   D A+  F Q+ ++G +P+ FT++ IL+ 
Sbjct: 581  ESSRKVLAHV-DASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSG 639

Query: 392  --QPAVSPF--QVHAHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
               P  S    QVH++ +K+    +  S+G +L+  Y+K  +L++A K+  E+ D K++V
Sbjct: 640  CTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLV 699

Query: 446  AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
             W+A ++GYAQ G ++ ++ ++ ++ S  V+ +E TF+SV+ AC+   AA+  GK+ H  
Sbjct: 700  EWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACS-EIAALTDGKEIHGL 758

Query: 506  SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKK 564
             IK+   +    +SAL+ MYSK G++ S+ E+FK  + K++++ WNSMI G+A++G+  +
Sbjct: 759  IIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANE 818

Query: 565  ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
            AL +F++M+   L+ D +T +GV+ AC+HAGL+ EG+  FD M   + I P ++HY+C++
Sbjct: 819  ALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLI 878

Query: 625  DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSA 670
            DL  R G L++A ++I+++PF A   +W T LAAC              +L+ ++P  S+
Sbjct: 879  DLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSS 938

Query: 671  IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
             YV LS+++AA G+W E    R+ M ++ V K  G SWI V NKT  F+  D  HP +  
Sbjct: 939  TYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLG 998

Query: 731  IYSKLEELS 739
            IY  L++L+
Sbjct: 999  IYKMLDDLT 1007



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 164/582 (28%), Positives = 280/582 (48%), Gaps = 41/582 (7%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L+ VL  C  L     GRQVHC+ +KSGF         LVD+Y +   V+D RRVFD + 
Sbjct: 163 LAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIA 222

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + + W S+++GY R     + L LF RM+  G  P+  T+ T++  LA  G ++    
Sbjct: 223 CPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLS---- 278

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
                                          DAR +   ++   ++ WN++++ Y  + L
Sbjct: 279 -------------------------------DARTLLKRIQMPSTVAWNAVISSYSQSGL 307

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             E F  + +M   G   TRSTF S++   A+       +Q+H+  +K+G+D +  + + 
Sbjct: 308 ESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSS 367

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y K G + DA K+F    E K++V W AM+ G +QN   +  +  F  M R  +  
Sbjct: 368 LINLYVKHGCISDAKKVFDFSTE-KNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEA 426

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + FT+  +L A   +       QVH   IK + +    V  A+L+ Y K G +D A  +F
Sbjct: 427 DDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALF 486

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            LI  KD V+W+A++ G A   + E AV + +++   G+ P+E +F++ INAC+    A 
Sbjct: 487 SLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIR-AT 545

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E GKQ H  SIK  + +   V S+L+ +YSK G++ES+ +V        +V  N++I G 
Sbjct: 546 ETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGL 605

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
            Q+    +A+E+F+++ +   +    TF  +++ CT       G+Q     +    +   
Sbjct: 606 VQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQD 665

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                 +V +Y +  +LE A  ++  +P   +   W   ++ 
Sbjct: 666 TSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISG 707



 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 156/558 (27%), Positives = 294/558 (52%), Gaps = 11/558 (1%)

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K G A D     +++        + D R +   +   + V+W +++S Y+++ +   V  
Sbjct: 254 KMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFG 313

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L+  M+ +G+ P   TF+++L   A         Q+H   +K+G +    V ++LI++Y+
Sbjct: 314 LYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYV 373

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   + DA+ VFD   +++ + WN+M+ G+V N+L  E  + F  M  A  E    TFVS
Sbjct: 374 KHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVS 433

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+  C     L + RQ+H   +KN +D D  +   ++  YSK G ++ A  +FS++   K
Sbjct: 434 VLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI-PGK 492

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVH 401
           D VSW A+I G   N   + AV    +M   G+ P+  +++  + A    +   +  Q+H
Sbjct: 493 DSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIH 552

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
              IK N   + +VG++L++ Y K G ++ + KV   +D   +V  +A++ G  Q    +
Sbjct: 553 CASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNRED 612

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSA 520
            A+++++Q+  +G KP+ FTF+S+++ CT P ++V  GKQ H+ ++K A LN    +  +
Sbjct: 613 EAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSV-IGKQVHSYTLKSALLNQDTSLGIS 671

Query: 521 LVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           LV +Y K   +E A+++       ++LV W + I GYAQ+G++ ++L +F  MR  D+  
Sbjct: 672 LVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRS 731

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI-YPTMEHYSCMVDLYSRAGMLEKAMD 638
           D  TF  V+ AC+    + +G++   +++    + Y T    S ++D+YS+ G +  + +
Sbjct: 732 DEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAA--SALMDMYSKCGDVISSFE 789

Query: 639 IINRMPFAASATVWRTVL 656
           I   +    +   W +++
Sbjct: 790 IFKELKNKQNIMPWNSMI 807



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 276/549 (50%), Gaps = 47/549 (8%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--DMNESNVVSWTSLLSGYARN 157
           +H   ++ G      +  +LVDLY R+  V    R         ++  + +S+LS +AR+
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137

Query: 158 KMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                VL+ F R++   G  P+ F  + VL   +  G +    QVH  V+K+ G   ++ 
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS-GFCSSAF 196

Query: 217 CNA-LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           C A L+ MY K   V+DAR VFDG+   D+I W SM+AGY     + +A   F+ M   G
Sbjct: 197 CQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMG 256

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           +   + T+V++I   A+   L  AR L  ++                             
Sbjct: 257 SAPDQVTYVTIISTLASMGRLSDARTLLKRI----------------------------- 287

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
                  +M   V+W A+IS + Q+G        +  M R+G+ P   T++ +L+A  ++
Sbjct: 288 -------QMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASM 340

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           + F    Q+HA  +K   + +  VG++L+N YVK G + +A KVF+   EK+IV W+AML
Sbjct: 341 TAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAML 400

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            G+ Q    E  +++++ +    ++ ++FTF SV+ AC     +++ G+Q H  +IK  +
Sbjct: 401 YGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLD-SLDIGRQVHCITIKNSM 459

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +  L V++A++ MYSK G I+ A  +F     +D VSWN++I G A +   ++A+ + K 
Sbjct: 460 DADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKR 519

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M+   +  D ++F   I AC++    + G+Q     + ++++       S ++DLYS+ G
Sbjct: 520 MKCYGIAPDEVSFATAINACSNIRATETGKQIHCASI-KYNVCSNHAVGSSLIDLYSKFG 578

Query: 632 MLEKAMDII 640
            +E +  ++
Sbjct: 579 DVESSRKVL 587


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/622 (37%), Positives = 361/622 (58%), Gaps = 50/622 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFD + +R+ I +N M+  Y+ N L+ +A   F +M   G      T+  V+K C+ 
Sbjct: 86  ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSC 145

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           +  LR+  QLH  V K G+D +  +  GL+  Y KCG + +A  +   M+  KDVVSW +
Sbjct: 146 SDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQS-KDVVSWNS 204

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVR--PNGFTYSIILTAQPAVSPFQVHAHIIKTNYE 410
           M++G+ QN   D A++   +M  +GVR  P+  T + +L   PAV+          T+ E
Sbjct: 205 MVAGYAQNMQFDDALDICREM--DGVRQKPDACTMASLL---PAVT---------NTSSE 250

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
               V    +N                 +++K +V+W+ M++ Y +      +V +Y Q+
Sbjct: 251 NVLYVEEMFMN-----------------LEKKSLVSWNVMISVYMKNSMPGKSVDLYLQM 293

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
               V+P+  T +SV+ AC   SA +  G++ H    + KL   + + ++L+ MY++ G 
Sbjct: 294 GKCEVEPDAITCASVLRACGDLSALL-LGRRIHEYVERKKLCPNMLLENSLIDMYARCGC 352

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           +E A  VF R + RD+ SW S+I  Y   G    A+ +F EM+      D I F+ +++A
Sbjct: 353 LEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSA 412

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C+H+GL++EG+ YF  M +++ I P +EH++C+VDL  R+G +++A +II +MP   +  
Sbjct: 413 CSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNER 472

Query: 651 VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           VW  +L++CR              L+ L P +S  YVLLSN+YA  G W E   +R LM 
Sbjct: 473 VWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMK 532

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
            R+++K  G S +E+ N+ ++FLAGD  HPQS +IY +L  L  ++K+ GY P T   L 
Sbjct: 533 RRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALH 592

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D+++E KE  L+ HSE+LAI F ++ T   +P++I KNLRVCGDCH   KLISK+ +R+I
Sbjct: 593 DVEEEDKECHLAVHSEKLAIVFAILNTQE-SPIRITKNLRVCGDCHIAAKLISKIVQREI 651

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           V+RDTNRFHHFK+G+CSCGDYW
Sbjct: 652 VIRDTNRFHHFKDGICSCGDYW 673



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 204/463 (44%), Gaps = 73/463 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD  P+RN + YN ++  Y  + L+ +AL +F  +   G      T   VLK C C 
Sbjct: 87  RNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCS 146

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G Q+H    K G   ++ V   L+ LY +   + + R V D+M   +VVSW S++
Sbjct: 147 DNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMV 206

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYA+N   D  L++   M     KP++ T +++L  + +                    
Sbjct: 207 AGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTN-------------------- 246

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             TS  N L               +F  +E +  ++WN M++ Y+ N +  ++ + +  M
Sbjct: 247 --TSSENVLY-----------VEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQM 293

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
           G    E    T  SV++ C     L L R++H  V +  +  +  +   L+  Y++CG +
Sbjct: 294 GKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCL 353

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           EDA ++F  M+  +DV SWT++IS +   G    AV  F +M   G  P+   +      
Sbjct: 354 EDAKRVFDRMK-FRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAF------ 406

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVA---- 446
                                     A+L+A    G+L+E    F ++ D+  I      
Sbjct: 407 -------------------------VAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEH 441

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           ++ ++    + G  + A  I +Q+    +KPNE  + +++++C
Sbjct: 442 FACLVDLLGRSGRVDEAYNIIKQMP---MKPNERVWGALLSSC 481



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 173/368 (47%), Gaps = 41/368 (11%)

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +++  + +HS+V       + ++   LM AY+  G+   A  +F ++ E ++V+ +  MI
Sbjct: 47  DIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPE-RNVIFYNVMI 105

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYE 410
             ++ N   D A+  F  M   G  P+ +TY  +L A           Q+H  + K   +
Sbjct: 106 RSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLD 165

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            +  VG  L+  Y K G L EA  V + +  KD+V+W++M+AGYAQ    + A+ I R++
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM 225

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
                KP+  T +S++ A T  S+                                   N
Sbjct: 226 DGVRQKPDACTMASLLPAVTNTSSE----------------------------------N 251

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           +    E+F    K+ LVSWN MI  Y ++    K+++++ +M + ++E D IT   V+ A
Sbjct: 252 VLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRA 311

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C     +  G++  +  V    + P M   + ++D+Y+R G LE A  + +RM F   A+
Sbjct: 312 CGDLSALLLGRRIHE-YVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVAS 370

Query: 651 VWRTVLAA 658
            W ++++A
Sbjct: 371 -WTSLISA 377


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/537 (41%), Positives = 333/537 (62%), Gaps = 21/537 (3%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVR 379
           L+  Y+K G +++A  +F  M E +D  SWTAMISG++++   + A+  F  M R +  +
Sbjct: 142 LISGYAKMGLLQEAKSLFDKMPE-RDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSK 200

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N FT S  L A  AV       ++H +I++T  +    V +AL + Y K G ++EA  +
Sbjct: 201 SNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHI 260

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + ++DIV W+AM+  Y Q G  +    ++  L   G++PNEFTFS V+NAC A   +
Sbjct: 261 FDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNAC-ANQTS 319

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
            E GK+ H    +   +     +SALV MYSK GN+ SA  VFK   + DL SW S+I G
Sbjct: 320 EELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAG 379

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           YAQ+G   +A+  F+ + +   + D ITF+GV++AC HAGLVD+G  YF  +  ++ +  
Sbjct: 380 YAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTH 439

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
           T +HY+C++DL +R+G  ++A +II++M       +W ++L  CR              L
Sbjct: 440 TADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEAL 499

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             ++P + A YV L+N+YA  G W E A++RK M+DR V K+ G SWI +K   + FL G
Sbjct: 500 FEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVG 559

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP+S +I   L +LS R+K+ G+ PDT++VL D++DE KE  LS HSE+LA+AFG++
Sbjct: 560 DDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGII 619

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +TP G P+++ KNLR C DCHT IK ISK+  R I+VRD+NRFH F++G CSC DYW
Sbjct: 620 STPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 219/448 (48%), Gaps = 45/448 (10%)

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           +N++ +  L++ H++     KP++  +ST++       ++    +VH  +  +G      
Sbjct: 52  QNRLKE-ALQILHQID----KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLF 106

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG--- 272
           + N L+ MY K   + D++ +FD M +RD  +WN +++GY    L  EA   F+ M    
Sbjct: 107 ILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERD 166

Query: 273 -------LAG----------AELTRS------------TFVSVIKLCATTKELRLARQLH 303
                  ++G           EL R             T  S +   A    LR+ +++H
Sbjct: 167 NFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIH 226

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
             +++ G+D D  + + L   Y KCG +E+A  IF  M + +D+V+WTAMI  + Q+G  
Sbjct: 227 GYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVD-RDIVTWTAMIDRYFQDGRR 285

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTAL 419
               + F  + R G+RPN FT+S +L A    +  +    VH ++ +  ++      +AL
Sbjct: 286 KEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASAL 345

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           ++ Y K G +  A +VF+   + D+ +W++++AGYAQ G  + A++ +  L   G +P+ 
Sbjct: 346 VHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDH 405

Query: 480 FTFSSVINACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
            TF  V++AC A +  V++G   FH+   +  L +     + ++ + ++ G  + A  + 
Sbjct: 406 ITFVGVLSAC-AHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENII 464

Query: 539 -KRQRKRDLVSWNSMICGYAQHGHTKKA 565
            K   K D   W S++ G   HG+ K A
Sbjct: 465 SKMSMKPDKFLWASLLGGCRIHGNLKLA 492



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 221/481 (45%), Gaps = 54/481 (11%)

Query: 19  PKSLRSPFYSK-------KDQSLFDRSPQR-NFVEYNRLLFEYCRDSLHQEALNLFLGIR 70
           P    SPF  K       KD +L    P   N   ++  +   C+ +  +EAL +   I 
Sbjct: 10  PSHSSSPFQPKTFFKSNTKDTTLV---PHLCNHKRFDEAIHILCQQNRLKEALQILHQID 66

Query: 71  RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE 130
           +    ++ + + S +K+   L     G++VH     SGF   + +   L+++Y + +++ 
Sbjct: 67  KPSASVYSTLIQSCIKSR--LLQQ--GKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLM 122

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYAR-----------NKMNDR----------------- 162
           D +++FD+M E ++ SW  L+SGYA+           +KM +R                 
Sbjct: 123 DSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDR 182

Query: 163 ---VLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               LELF  M+  +  K N FT S+ L   A    +    ++H  +++ G +    V +
Sbjct: 183 PNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWS 242

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL  MY K   + +AR +FD M DRD +TW +M+  Y  +    E F+ F ++  +G   
Sbjct: 243 ALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRP 302

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              TF  V+  CA      L +++H  + + G D      + L+  YSKCG M  A ++F
Sbjct: 303 NEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVF 362

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAV 395
               +  D+ SWT++I+G+ QNG  D A+ +F  + + G +P+  T+  +L+A      V
Sbjct: 363 KETPQ-PDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLV 421

Query: 396 SPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLA 452
                + H IK  Y  + +      +++   + G  DEA  +   +  K D   W+++L 
Sbjct: 422 DKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLG 481

Query: 453 G 453
           G
Sbjct: 482 G 482



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 164/351 (46%), Gaps = 30/351 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR----LGLPLFGSTLSSVLKT 87
           +SLFD+ P+R+   +  ++  Y R     EAL LF  ++R           S+  +    
Sbjct: 156 KSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAA 215

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             CL     G+++H   +++G   D  V ++L D+Y +  ++E+ R +FD M + ++V+W
Sbjct: 216 VPCL---RIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTW 272

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T+++  Y ++       +LF  +   GI+PN FTFS VL   A++       +VH  + +
Sbjct: 273 TAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTR 332

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G +  +   +AL+ MY K   +  A  VF      D  +W S++AGY  N    EA   
Sbjct: 333 VGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRY 392

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS- 326
           F  +  +G +    TFV V+  CA           H+ ++  G+D+ H+I+    + ++ 
Sbjct: 393 FELLVKSGTQPDHITFVGVLSACA-----------HAGLVDKGLDYFHSIKEQYGLTHTA 441

Query: 327 -----------KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                      + G+ ++A  I S M    D   W +++ G   +G + LA
Sbjct: 442 DHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLA 492


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/680 (34%), Positives = 385/680 (56%), Gaps = 26/680 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHT-MVIKNGGEVVTSV--CNALISMYLKSKMVRDARAVFD 238
            + +L V A+   + T   +H  +++ N       V   N+LI++Y+K      AR VFD
Sbjct: 34  LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS--VIKLCATTKEL 296
            M +R+ ++W +M+ GY  +    E  + F +M  +  E   + FV+  V K C+++  +
Sbjct: 94  LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSD-ESRPNEFVATVVFKSCSSSGRI 152

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
              +Q H   LK+G+     +R  L+  YS C    +A ++   +    D+  +++ +SG
Sbjct: 153 EEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDL-PYCDLSVFSSALSG 211

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKS 412
           +L+ GA         +M +E +  +  TY   L     +       Q+H+ +++  +   
Sbjct: 212 YLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSE 271

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                A++N Y K G +  A +VF+    ++IV  + ++  Y Q    E A+ ++ ++ +
Sbjct: 272 VEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDT 331

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           + V PNE+TF+  +N+  A  + ++ G   H   +K+   N + V +ALV MY+K G+IE
Sbjct: 332 KEVPPNEYTFAISLNS-IAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            A + F     RD+V+WN+MICG++ HG  ++ LE F  M       + ITFIGV+ AC+
Sbjct: 391 DARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACS 450

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           H G V++G  YF+ ++ + ++ P ++HY+C+V L S+AGM + A D +   P       W
Sbjct: 451 HVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510

Query: 653 RTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
           R +L AC +              I   P+DS +YVLLSN++A +  W+  A VR LMN R
Sbjct: 511 RALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKR 570

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
            VKKE G SWI ++N+T+ FLA +  HP+   IY+K++E+ ++++  GY PD + V  D+
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDV 630

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           D+E +E  LS HSE+LA+A+GL+ TP  +PL + KN+R+C DCH+ IKLISK+ +R IV+
Sbjct: 631 DEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVI 690

Query: 819 RDTNRFHHFKEGLCSCGDYW 838
           RD+NRFHHF++G CSC DYW
Sbjct: 691 RDSNRFHHFRDGQCSCCDYW 710



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 241/490 (49%), Gaps = 13/490 (2%)

Query: 75  PLFG-STLSSVLKTCGCLFDHVFGRQVHCECV---KSGFARDVNVSTSLVDLYMRTNNVE 130
           PLF    L+ +LK C        G  +H   +   +S  A+DV    SL++LY++     
Sbjct: 27  PLFPIDRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETV 86

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV-EGIKPNSFTFSTVLGVL 189
             R+VFD M E NVVSW +++ GY  +  +  VL+LF  M   +  +PN F  + V    
Sbjct: 87  RARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSC 146

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
           +  G +    Q H   +K+G      V N L+ MY       +A  V D +   D   ++
Sbjct: 147 SSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           S ++GY+      E  E    M      L   T++S ++LC+  ++L LARQ+HS++++ 
Sbjct: 207 SALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRL 266

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           G + +      ++  Y KCGK+  A ++F      +++V  T ++  + Q+ + + A+N 
Sbjct: 267 GFNSEVEASGAIINMYGKCGKVLYAQRVFDNT-HAQNIVLNTTIMDAYFQDKSFEEALNL 325

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVK 425
           F +M  + V PN +T++I L +   +S  +    +H  ++K+ Y     VG AL+N Y K
Sbjct: 326 FSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAK 385

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G +++A K F  +  +DIV W+ M+ G++  G     ++ + ++   G  PN  TF  V
Sbjct: 386 SGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGV 445

Query: 486 INACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-K 543
           + AC+     VEQG   F+    K  +   L   + +V + SK G  + A +  +    +
Sbjct: 446 LQACSH-VGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504

Query: 544 RDLVSWNSMI 553
            D+V+W +++
Sbjct: 505 WDVVAWRALL 514



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 14/318 (4%)

Query: 53  YCRDSLHQEALNLFLG----------IRRLG---LPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           YC  S+   AL+ +L           +RR+    L L   T  S L+ C  L D    RQ
Sbjct: 199 YCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQ 258

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H   V+ GF  +V  S +++++Y +   V   +RVFD+ +  N+V  T+++  Y ++K 
Sbjct: 259 IHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKS 318

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
            +  L LF +M  + + PN +TF+  L  +A+  ++     +H +V+K+G      V NA
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNA 378

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L++MY KS  + DAR  F GM  RD +TWN+M+ G+  + L  E  E F+ M +AG    
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPN 438

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           R TF+ V++ C+    +       +Q++K   +  D    T ++   SK G  +DA    
Sbjct: 439 RITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFM 498

Query: 339 SMMREMKDVVSWTAMISG 356
                  DVV+W A+++ 
Sbjct: 499 RTAPIEWDVVAWRALLNA 516



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 195/460 (42%), Gaps = 17/460 (3%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLP-LFGSTLSSVLK 86
           + + +FD  P+RN V +  ++  Y       E L LF  +       P  F +T+  V K
Sbjct: 87  RARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATV--VFK 144

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
           +C        G+Q H   +KSG      V  +LV +Y   +   +  RV DD+   ++  
Sbjct: 145 SCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSV 204

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           ++S LSGY          E+  RM  E +  ++ T+ + L + ++   +  A Q+H+ ++
Sbjct: 205 FSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMV 264

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           + G         A+I+MY K   V  A+ VFD    ++ +   +++  Y  ++   EA  
Sbjct: 265 RLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALN 324

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M          TF   +   A    L+    LH  VLK+G      +   L+  Y+
Sbjct: 325 LFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYA 384

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G +EDA K FS M   +D+V+W  MI G   +G     +  F +M   G  PN  T+ 
Sbjct: 385 KSGSIEDARKAFSGM-TFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFI 443

Query: 387 IILTAQPAV-----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID- 440
            +L A   V       +  +  + K N +      T ++    K G+  +A         
Sbjct: 444 GVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPI 503

Query: 441 EKDIVAWSAML-AGYA----QIGDTEGAVKIYRQLTSEGV 475
           E D+VAW A+L A Y     ++G       IY+     GV
Sbjct: 504 EWDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGV 543


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/703 (34%), Positives = 398/703 (56%), Gaps = 67/703 (9%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMY--LKSKMVRD-ARAVFDGMEDRDSITWNSMVAG 254
            +Q+H   I NG        + LIS +  L SK   D +R +F  ++  +   WN+M+ G
Sbjct: 25  GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84

Query: 255 YVTNELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           Y  ++   EA   + +M   G A     TF  ++  CA    L    ++HS ++K+G + 
Sbjct: 85  YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIF--SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
           D  +R  L+  YS  G +  A  +F  S++R   D+VS+  MI G+ +    + A+  F 
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVR---DLVSYNTMIKGYAEVNQPESALCLFG 201

Query: 372 QMTREGVRPNGFTYSIILTA-----QPAVSPFQVHAHIIKT------------------- 407
           +M   G+ P+ FT+  + +      +P V   Q+HA + K                    
Sbjct: 202 EMQNSGILPDEFTFVALFSVCSVLNEPNVGK-QIHAQVYKNLRSIDSNILLKSAIVDMYA 260

Query: 408 ---------------NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                             KS +  ++++  Y + G ++ A K+F  + E+D+++W+AM++
Sbjct: 261 KCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKL 511
           GY+Q G    A+++++++ + G+KP+E T  +V++AC A   A + GK+ +H        
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSAC-ARLGAFDLGKRLYHQYIENGVF 379

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRK--RDLVSWNSMICGYAQHGHTKKALEVF 569
           N    +++A++ MY+K G+I+SA E+F+R  K  +    +NSMI G AQHG  + A+ VF
Sbjct: 380 NQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVF 439

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           +E+    L+ D +TF+GV+ AC H+GL++EG++ F+ M N + I P MEHY CMVDL  R
Sbjct: 440 RELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGR 499

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
            G LE+A D++ +MPF A++ +WR +L+ACR              L+ ++    A YVLL
Sbjct: 500 YGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLL 559

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN+ A    W+E  +VRK+M D  ++K  G+S+IE+    + F+A D SHPQ  +I   L
Sbjct: 560 SNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELML 619

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           ++++ RLK AGY P+T+ V+ DID+E KE+++S HSE+LA+AFGL+       ++IVKNL
Sbjct: 620 KDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNL 679

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+C DCH   KL+S++  R+I VRDT RFHHF+ G CSC D+W
Sbjct: 680 RICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 254/518 (49%), Gaps = 57/518 (11%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYM---RTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           G Q+H + + +G    +   + L+  +      + ++  R +F  ++  N+  W +++ G
Sbjct: 25  GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84

Query: 154 YARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           Y+R+      + L+  M  +GI  PN+FTF  +L   A    +    +VH+ +IK+G E 
Sbjct: 85  YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V NALI +Y     +  AR +FD    RD +++N+M+ GY        A   F  M 
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ 204

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI-----------RTGL 321
            +G      TFV++  +C+   E  + +Q+H+QV KN    D NI           + GL
Sbjct: 205 NSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGL 264

Query: 322 M-----------------------VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
           +                         Y++CG++  A K+F+ M E +DV+SWTAMISG+ 
Sbjct: 265 INIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE-RDVISWTAMISGYS 323

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV-----HAHIIKTNYEKSF 413
           Q G    A+  F +M   G++P+  T   +L+A   +  F +     H +I    + ++ 
Sbjct: 324 QAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNT 383

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDE--KDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            +  A+++ Y K G +D A ++F  + +  K    +++M+AG AQ G  E A+ ++R+L 
Sbjct: 384 ILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELI 443

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQ-----FHACSIKAKLNNALCVSSALVTMYS 526
           S G+KP+E TF  V+ AC   S  +E+GK+     F+A  IK ++ +  C    +V +  
Sbjct: 444 STGLKPDEVTFVGVLCAC-GHSGLIEEGKKLFESMFNAYGIKPQMEHYGC----MVDLLG 498

Query: 527 KKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
           + G +E A ++ ++   + + V W +++     HG+ K
Sbjct: 499 RYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVK 536



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 196/400 (49%), Gaps = 42/400 (10%)

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME--DASKIFSMMR 342
           S + L  + K  +   Q+H+Q + NG+       + L+  +S  G  +  D S++     
Sbjct: 11  SSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR-PNGFTYSIILTAQPAVSPF--- 398
           +  ++  W  MI G+ ++     A+  +  M  +G+  PN FT+  +L +   +S     
Sbjct: 71  DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPG 130

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            +VH+HIIK  +E    V  AL++ Y   G L+ A  +F+    +D+V+++ M+ GYA++
Sbjct: 131 HEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEV 190

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK--AKLNNAL 515
              E A+ ++ ++ + G+ P+EFTF ++ + C+  +     GKQ HA   K    +++ +
Sbjct: 191 NQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEP-NVGKQIHAQVYKNLRSIDSNI 249

Query: 516 CVSSALVTMYSK--------------------------------KGNIESASEVFKRQRK 543
            + SA+V MY+K                                 G I  A ++F    +
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE 309

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           RD++SW +MI GY+Q G   +ALE+FKEM    ++ D +T + V++AC   G  D G++ 
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRL 369

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +   +            + ++D+Y++ G ++ A++I  R+
Sbjct: 370 YHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV 409



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 220/482 (45%), Gaps = 58/482 (12%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKTCGCLF 92
           LF +    N   +N ++  Y R    +EA+ L++ +   G+ P    T   +L +C  L 
Sbjct: 66  LFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS 125

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G +VH   +K GF  D+ V  +L+ LY    N+   R +FD+    ++VS+ +++ 
Sbjct: 126 SLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIK 185

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GYA     +  L LF  MQ  GI P+ FTF  +  V +         Q+H  V KN   +
Sbjct: 186 GYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSI 245

Query: 213 VTSVC--NALISMYLKSKMVRD--------------------------------ARAVFD 238
            +++   +A++ MY K  ++                                  AR +F+
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M +RD I+W +M++GY       EA E F  M   G +    T V+V+  CA      L
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDL 365

Query: 299 ARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGKMEDASKIFSMM-REMKDVVSWTAMIS 355
            ++L+ Q ++NG+ F+ N  +   +M  Y+KCG ++ A +IF  + + MK    + +MI+
Sbjct: 366 GKRLYHQYIENGV-FNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIA 424

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQ--VHAHIIK 406
           G  Q+G  + A+  F ++   G++P+  T+  +L A       +     F+   +A+ IK
Sbjct: 425 GLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIK 484

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLA-----GYAQIGDT 460
              E  +     LL  Y   G L+EA  + + +  E + V W A+L+     G  +IG+ 
Sbjct: 485 PQMEH-YGCMVDLLGRY---GCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEI 540

Query: 461 EG 462
            G
Sbjct: 541 AG 542



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 161/376 (42%), Gaps = 44/376 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++LFD S  R+ V YN ++  Y   +  + AL LF  ++  G+     T  ++   C  L
Sbjct: 166 RTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVL 225

Query: 92  FDHVFGRQVHCECVKSGFARDVNV--STSLVDL--------------------------- 122
            +   G+Q+H +  K+  + D N+   +++VD+                           
Sbjct: 226 NEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWS 285

Query: 123 -----YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
                Y R   +   R++F+ M+E +V+SWT+++SGY++       LELF  M+  GIKP
Sbjct: 286 SMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKP 345

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNG----GEVVTSVCNALISMYLKSKMVRDA 233
           +  T   VL   A  G      +++   I+NG      ++T+   A++ MY K   +  A
Sbjct: 346 DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTA---AVMDMYAKCGSIDSA 402

Query: 234 RAVFD--GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
             +F   G   +    +NSM+AG   + L   A   F  +   G +    TFV V+  C 
Sbjct: 403 LEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACG 462

Query: 292 TTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
            +  +   ++L   +    GI         ++    + G +E+A  +   M    + V W
Sbjct: 463 HSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIW 522

Query: 351 TAMISGHLQNGAIDLA 366
            A++S    +G + + 
Sbjct: 523 RALLSACRTHGNVKIG 538


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/691 (35%), Positives = 383/691 (55%), Gaps = 54/691 (7%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---ARAVFDGMEDRDSITWNSMVAGYVT 257
           +H  +IK G        + LI   + S        A +VF  +++ + + WN+M  G+  
Sbjct: 52  IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           +   + A + +  M   G      TF  V+K CA +K  +  +Q+H  VLK G D D  +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171

Query: 318 RTGLMVAYSKCGKMEDASKIF--SMMREM----------------------------KDV 347
            T L+  Y + G++EDA K+F  S  R++                            KDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
           VSW AMISG+ + G    A+  F  M +  VRP+  T   +++A           QVH  
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           I    +  +  +  AL++ Y K G L+ A  +FE +  KD+++W+ ++ GY  +   + A
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK--AKLNNALCVSSAL 521
           + +++++   G  PN+ T  S++ AC A   A++ G+  H    K    + NA  + ++L
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPAC-AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + MY+K G+IE+A +VF     + L SWN+MI G+A HG    + ++F  MR+  ++ D 
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           ITF+G+++AC+H+G++D G+  F  M  ++ + P +EHY CM+DL   +G+ ++A ++IN
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 530

Query: 642 RMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQE 687
            M       +W ++L AC+              LI ++P +   YVLLSN+YA+ G W E
Sbjct: 531 MMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNE 590

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
            A+ R L+ND+ +KK  G S IE+ +  + F+ GD  HP++ +IY  LEE+   L+ AG+
Sbjct: 591 VAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGF 650

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            PDTS VLQ++++E KE  L  HSE+LAIAFGL++T  G  L IVKNLRVC +CH   KL
Sbjct: 651 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 710

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ISK+ +R+I+ RD  RFHHF++G+CSC DYW
Sbjct: 711 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/516 (26%), Positives = 233/516 (45%), Gaps = 45/516 (8%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDMNESNVVSWTSLLSGY 154
           R +H + +K G        + L++  + + + E       VF  + E N++ W ++  G+
Sbjct: 50  RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A +      L+L+  M   G+ PNS+TF  VL   A         Q+H  V+K G ++  
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDR------------------------------- 243
            V  +LISMY+++  + DA  VFD    R                               
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D ++WN+M++GY     + EA E F +M         ST V+V+  CA +  + L RQ+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
             +  +G   +  I   L+  YSKCG++E A  +F  +   KDV+SW  +I G+      
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL-PYKDVISWNTLIGGYTHMNLY 348

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK--TNYEKSFSVGT 417
             A+  F +M R G  PN  T   IL A   +        +H +I K       + S+ T
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           +L++ Y K G ++ A +VF  I  K + +W+AM+ G+A  G  + +  ++ ++   G++P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468

Query: 478 NEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           ++ TF  +++AC+  S  ++ G+  F   +   K+   L     ++ +    G  + A E
Sbjct: 469 DDITFVGLLSACSH-SGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527

Query: 537 VFKRQRKR-DLVSWNSMICGYAQHGHTKKALEVFKE 571
           +        D V W S++     HG+ +   E F E
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNVELG-ESFAE 562



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 189/408 (46%), Gaps = 34/408 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F    + N + +N +   +   S    AL L++ +  LGL     T   VLK+C    
Sbjct: 89  SVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK 148

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--------------- 137
               G+Q+H   +K G   D+ V TSL+ +Y++   +ED  +VFD               
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208

Query: 138 ----------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                           ++   +VVSW +++SGYA        LELF  M    ++P+  T
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             TV+   A  G +    QVH  +  +G      + NALI +Y K   +  A  +F+ + 
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN+++ GY    L+ EA   F  M  +G      T +S++  CA    + + R 
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    ++RT L+  Y+KCG +E A ++F+ +   K + SW AMI G   
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH-KSLSSWNAMIFGFAM 447

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
           +G  D + + F +M + G++P+  T+  +L+A        +  HI +T
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 9/356 (2%)

Query: 20  KSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           K   S  Y +  Q LFD  P ++ V +N ++  Y     ++EAL LF  + +  +    S
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T+ +V+  C        GRQVH      GF  ++ +  +L+DLY +   +E    +F+ +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              +V+SW +L+ GY    +    L LF  M   G  PN  T  ++L   A  G +    
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387

Query: 200 QVHTMVIK--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
            +H  + K   G    +S+  +LI MY K   +  A  VF+ +  +   +WN+M+ G+  
Sbjct: 388 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH---SQVLKNGIDFD 314
           +     +F+ F+ M   G +    TFV ++  C+ +  L L R +    +Q  K     +
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLE 507

Query: 315 HNIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           H    G M+      G  ++A ++ +MM    D V W +++     +G ++L  +F
Sbjct: 508 H---YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/679 (36%), Positives = 378/679 (55%), Gaps = 24/679 (3%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
            S +  T+L    DE  +A   ++H ++I  G     +    LI  Y +   +  AR VF
Sbjct: 6   GSKSLKTLLITSKDEPTIA---KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVF 62

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           D         WN+M+  Y       EA   ++ M   G     ST+  V+K C  + +LR
Sbjct: 63  DKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLR 122

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
              +   Q +  G   D  +   ++  Y+KCGKM++A ++F  M   +D+V WT MI+G 
Sbjct: 123 SGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGR-RDLVCWTTMITGL 181

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSF 413
            QNG    AV+ + QM ++ V  +G     ++ A   +        +H ++I+ +     
Sbjct: 182 AQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDV 241

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            V T+L++ Y K G L+ A+ VF  +  K++++WSA+++G+AQ G    A+++   + S 
Sbjct: 242 IVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSF 301

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G KP+  +  SV+ AC+     ++ GK  H   ++ +L+     S+A++ MYSK G++  
Sbjct: 302 GYKPDSVSLVSVLLACS-QVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSF 359

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A  VF +   RD +SWN++I  Y  HG  ++AL +F +MR  +++ D  TF  +++A +H
Sbjct: 360 ARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSH 419

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
           +GLV++G+ +F IMVNE+ I P+ +HY+CMVDL SRAG +E+A ++I  M       +W 
Sbjct: 420 SGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWV 479

Query: 654 TVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
            +L+ C              +++ L P D  IY L+SN +A    W E A VRK+M    
Sbjct: 480 ALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTG 539

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           +KK  GYS +EV  K ++FL  D SH Q  +I   L +L   +K  GY P T +VL +++
Sbjct: 540 MKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLE 599

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           +E KE +L  HSERLAIAFGL+ T  G  L I KNLRVCGDCH   K ISK+  R+IVVR
Sbjct: 600 EEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVR 659

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D  RFHHFK+G+CSCGDYW
Sbjct: 660 DVKRFHHFKDGVCSCGDYW 678



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 236/483 (48%), Gaps = 16/483 (3%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H   + +G     N +  L+  Y R  ++E  R+VFD   +  V +W +++  Y+R  
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                L L+HRM  EG++P+S T++ VL        + +  +     +  G      V  
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           A++++Y K   + +A  VFD M  RD + W +M+ G   N    EA + +  M     E 
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
                + +I+ C T    ++   +H  +++  I  D  ++T L+  Y+K G +E AS +F
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M   K+V+SW+A+ISG  QNG    A+     M   G +P+  +   +L A   V   
Sbjct: 265 RRML-YKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFL 323

Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           +    VH +I++  +    S  TA+++ Y K G L  A  VF+ I  +D ++W+A++A Y
Sbjct: 324 KLGKSVHGYIVRRLHFDCVS-STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASY 382

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI-KAKLNN 513
              G  E A+ ++ Q+    VKP+  TF+S+++A +  S  VE+G+ + +  + + K+  
Sbjct: 383 GIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFS-HSGLVEKGRYWFSIMVNEYKIQP 441

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGH-------TKKA 565
           +    + +V + S+ G +E A E+ +    +  +  W +++ G   HG         KK 
Sbjct: 442 SEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKV 501

Query: 566 LEV 568
           LE+
Sbjct: 502 LEL 504



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 214/431 (49%), Gaps = 14/431 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD+SPQ     +N ++  Y R     EAL+L+  +   G+    ST + VLK C   
Sbjct: 59  RQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRS 118

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G +   + V  G+  DV V  ++++LY +   +++  RVFD M   ++V WT+++
Sbjct: 119 LDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMI 178

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G A+N      ++++ +M  + ++ +      ++      G     + +H  +I+    
Sbjct: 179 TGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDII 238

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V  +L+ MY K+  +  A  VF  M  ++ I+W+++++G+  N     A +   +M
Sbjct: 239 MDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDM 298

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +    + VSV+  C+    L+L + +H  +++  + FD    T ++  YSKCG +
Sbjct: 299 QSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSL 357

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A  +F  +   +D +SW A+I+ +  +G+ + A++ F QM    V+P+  T++ +L+A
Sbjct: 358 SFARTVFDQI-SFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSA 416

Query: 392 ---QPAVSPFQVHAHIIKTNY-----EKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEK 442
                 V   +    I+   Y     EK ++    LL+   + G ++EA ++ E +I E 
Sbjct: 417 FSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLS---RAGRVEEAQELIESMITEP 473

Query: 443 DIVAWSAMLAG 453
            I  W A+L+G
Sbjct: 474 GIAIWVALLSG 484


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/636 (36%), Positives = 370/636 (58%), Gaps = 44/636 (6%)

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
           S+ W  ++  Y ++ L   +  +FN +   G    R  F S+++     K   LA+ LH+
Sbjct: 41  SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHA 100

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCG----------------------KMEDASKIFSMMR 342
            V++ G  FD      LM  YSK                        K++   K+F  M 
Sbjct: 101 AVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRM- 159

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQPAVSPF- 398
            ++DVVSW  +I+G+ QNG  + A+N   +M +E +RP+ FT S IL   T    V+   
Sbjct: 160 PVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGK 219

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           ++H + I+  ++K   +G++L++ Y K   ++ +   F L+  +D ++W++++AG  Q G
Sbjct: 220 EIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             +  +  +R++  E VKP + +FSSVI AC A   A+  GKQ HA  I+   ++   ++
Sbjct: 280 RFDQGLGFFRRMLKEKVKPMQVSFSSVIPAC-AHLTALNLGKQLHAYIIRLGFDDNKFIA 338

Query: 519 SALVTMYSKKGNIESASEVFKRQR--KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           S+L+ MY+K GNI+ A  +F +     RD+VSW ++I G A HGH   A+ +F+EM    
Sbjct: 339 SSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDG 398

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++   + F+ V+TAC+HAGLVDEG +YF+ M  +  + P +EHY+ + DL  RAG LE+A
Sbjct: 399 VKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEA 458

Query: 637 MDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
            D I+ M    + +VW T+LAACR              ++ + P +   +V++SN+Y+A 
Sbjct: 459 YDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAA 518

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
             W++ A++R  M    +KK    SWIEV NK ++FLAGD SHP  ++I   L  L  ++
Sbjct: 519 QRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQM 578

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           +  GY  DT+ VL D+D+EHK  +L  HSERLAIAFG+++T +G  ++++KN+RVC DCH
Sbjct: 579 EKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCH 638

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T IK ++K+  R+I+VRD +RFHHFK G CSCGDYW
Sbjct: 639 TAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 215/456 (47%), Gaps = 47/456 (10%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV-FGRQVHCECVKSGFAR 111
           Y    L + +L  F  +R  G+        S+L+    LF H    + +H   ++ GF  
Sbjct: 51  YASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRA-STLFKHFNLAQSLHAAVIRLGFHF 109

Query: 112 DVNVSTSLVDLYMR-----------------TNN-----VEDGRRVFDDMNESNVVSWTS 149
           D+  + +L+++Y +                  NN     ++  R++FD M   +VVSW +
Sbjct: 110 DLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNT 169

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G A+N M +  L +   M  E ++P+SFT S++L +  +   V    ++H   I++G
Sbjct: 170 VIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHG 229

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +    + ++LI MY K   V  +   F  + +RD+I+WNS++AG V N    +    F 
Sbjct: 230 FDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFR 289

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M     +  + +F SVI  CA    L L +QLH+ +++ G D +  I + L+  Y+KCG
Sbjct: 290 RMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCG 349

Query: 330 KMEDASKIFSMMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            ++ A  IF+ + EM  +D+VSWTA+I G   +G    AV+ F +M  +GV+P    +  
Sbjct: 350 NIKMARYIFNKI-EMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMA 408

Query: 388 ILTAQPAVSPFQVHAHIIKTNY------EKSFSVGTALLNAYVKKGILDEAAKVFELID- 440
           +LTA         HA ++   +      ++ F V   L +      +L  A ++ E  D 
Sbjct: 409 VLTACS-------HAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDF 461

Query: 441 ------EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
                 E     WS +LA      + E A K+  ++
Sbjct: 462 ISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKI 497



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 216/457 (47%), Gaps = 30/457 (6%)

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           ++W  ++  YA + +    L  F+ ++  GI P+   F ++L           A  +H  
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 205 VIKNGGEVVTSVCNALISMYLK----------------------SKMVRDARAVFDGMED 242
           VI+ G        NAL++MY K                      S  +   R +FD M  
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           RD ++WN+++AG   N ++ EA      MG         T  S++ +      +   +++
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H   +++G D D  I + L+  Y+KC ++E +   F ++   +D +SW ++I+G +QNG 
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSN-RDAISWNSIIAGCVQNGR 280

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
            D  + FF +M +E V+P   ++S ++ A   ++      Q+HA+II+  ++ +  + ++
Sbjct: 281 FDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASS 340

Query: 419 LLNAYVKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           LL+ Y K G +  A  +F  I+  ++D+V+W+A++ G A  G    AV ++ ++  +GVK
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVK 400

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P    F +V+ AC+      E  K F++      +   L   +A+  +  + G +E A +
Sbjct: 401 PCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYD 460

Query: 537 VFKRQRKRDLVS-WNSMICGYAQHGHTKKALEVFKEM 572
                 +    S W++++     H + + A +V  ++
Sbjct: 461 FISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKI 497



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 171/349 (48%), Gaps = 25/349 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFDR P R+ V +N ++    ++ +++EALN+   + +  L     TLSS+L      
Sbjct: 153 RKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEH 212

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G+++H   ++ GF +DV + +SL+D+Y +   VE     F  ++  + +SW S++
Sbjct: 213 ANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSII 272

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G  +N   D+ L  F RM  E +KP   +FS+V+   A    +    Q+H  +I+ G +
Sbjct: 273 AGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFD 332

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNELHMEAFETFN 269
               + ++L+ MY K   ++ AR +F+ +E  DRD ++W +++ G   +   ++A   F 
Sbjct: 333 DNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFE 392

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA----- 324
            M + G +     F++V+  C+           H+ ++  G  + ++++    VA     
Sbjct: 393 EMLVDGVKPCYVAFMAVLTACS-----------HAGLVDEGWKYFNSMQRDFGVAPGLEH 441

Query: 325 -------YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                    + G++E+A    S M E      W+ +++    +  I+LA
Sbjct: 442 YAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELA 490


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/777 (31%), Positives = 416/777 (53%), Gaps = 25/777 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF   P+RN V +  L+     +   +EAL  +  +RR G+P   +  ++V+  CG L
Sbjct: 99  QRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSL 158

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            + V G QV  + + SG    V+V+ SL+ ++     V D  ++FD M E + +SW +++
Sbjct: 159 ENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMI 218

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y+   +  +   +F  M+  G++P++ T  +++ V A     +    +H++ +++  +
Sbjct: 219 SMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLD 278

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V NAL++MY  +  + DA  +F  M  RD I+WN+M++ YV N    +A +T   +
Sbjct: 279 SSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQL 338

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                     TF S +  C++   L   + +H+ VL+  +  +  +   L+  Y KC  M
Sbjct: 339 FHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSM 398

Query: 332 EDASKIFSMMREMKDVVSWTAMISGH--LQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           EDA K+F  M    D+VS+  +I G+  L++G    A+  F  M   G++PN  T   I 
Sbjct: 399 EDAEKVFQSM-PTHDIVSYNVLIGGYAVLEDGT--KAMQVFSWMRSAGIKPNYITMINIH 455

Query: 390 TAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
            +  + +        +HA+II+T +     V  +L+  Y K G L+ +  +F  I  K+I
Sbjct: 456 GSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNI 515

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V+W+A++A   Q+G  E A+K++  +   G K +    +  +++C A  A++E+G Q H 
Sbjct: 516 VSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSC-ASLASLEEGMQLHG 574

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             +K+ L++   V +A + MY K G ++   +V   Q  R    WN++I GYA++G+ K+
Sbjct: 575 LGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKE 634

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           A E FK+M     + D +TF+ +++AC+HAGLVD+G  Y++ M +   + P ++H  C+V
Sbjct: 635 AEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIV 694

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           DL  R G   +A   I  MP   +  +WR++L++ R              L+ L P D +
Sbjct: 695 DLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDS 754

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            YVLLSN+YA    W +  ++R  M    + K    SW+++KN+  +F  GD  H  + +
Sbjct: 755 AYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEK 814

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
           IY+KL+E+  +L++ GY  DTS  L D D+E KE  L  HSE+LA+A+GL+  P G+
Sbjct: 815 IYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGS 871



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 164/586 (27%), Positives = 307/586 (52%), Gaps = 9/586 (1%)

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTC---GCLFDHVFGRQVHCECVKSGFARDVNVSTS 118
           A  +  G+R  G+PL G  L+S++  C   G       G  +H    ++G   +V + T+
Sbjct: 25  AFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTA 84

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+ LY     V D +R+F +M E NVVSWT+L+   + N   +  L  + +M+ +G+  N
Sbjct: 85  LLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCN 144

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           +  F+TV+ +          +QV + VI +G +   SV N+LI+M+     V DA  +FD
Sbjct: 145 ANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFD 204

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            ME+ D+I+WN+M++ Y    +  + F  F++M   G     +T  S++ +CA++     
Sbjct: 205 RMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSH 264

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
              +HS  L++ +D    +   L+  YS  GK+ DA  +F  M   +D++SW  MIS ++
Sbjct: 265 GSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSR-RDLISWNTMISSYV 323

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPA--VSPFQVHAHIIKTNYEKSFS 414
           QN     A+    Q+      PN  T+S  L A   P   +    VHA +++ + +++  
Sbjct: 324 QNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLL 383

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           VG +L+  Y K   +++A KVF+ +   DIV+++ ++ GYA + D   A++++  + S G
Sbjct: 384 VGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAG 443

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +KPN  T  ++  +  + +     G+  HA  I+    +   V+++L+TMY+K GN+ES+
Sbjct: 444 IKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 503

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
           + +F     +++VSWN++I    Q GH ++AL++F +M+    + D +     +++C   
Sbjct: 504 TNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 563

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
             ++EG Q   + +       +    + M D+Y + G +++ + ++
Sbjct: 564 ASLEEGMQLHGLGMKSGLDSDSYVVNAAM-DMYGKCGKMDEMLQVV 608



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 204/412 (49%), Gaps = 10/412 (2%)

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC---ATTKEL 296
           M DR   TW + V+G V       AFE    M   G  L+     S++  C      + +
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
                +H+   + G+  +  I T L+  Y   G + DA ++F  M E ++VVSWTA++  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPE-RNVVSWTALMVA 119

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQPAVSPFQVHAHIIKTNYEKS 412
              NG ++ A+  + QM R+GV  N   ++ ++    + +  V   QV + +I +  +  
Sbjct: 120 LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ 179

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            SV  +L+  +   G + +A K+F+ ++E D ++W+AM++ Y+  G       ++  +  
Sbjct: 180 VSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRH 239

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
            G++P+  T  S+++ C A S     G   H+  +++ L++++ V +ALV MYS  G + 
Sbjct: 240 HGLRPDATTLCSLMSVC-ASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            A  +F    +RDL+SWN+MI  Y Q+ ++  AL+   ++   +   + +TF   + AC+
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 358

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             G + +G+    I++ +  +   +   + ++ +Y +   +E A  +   MP
Sbjct: 359 SPGALIDGKMVHAIVL-QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 409


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/832 (29%), Positives = 427/832 (51%), Gaps = 26/832 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD     N + +  ++  Y       EAL +    R          L+  ++  G  
Sbjct: 118 RRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMK 177

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM----NESNVVSW 147
            D   GR  H    + G+  D  V+ SL+ +Y     +E   + FD        S+VVSW
Sbjct: 178 RDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSW 237

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T +L+    ++     L+LF RM+ +G+ P+   F TVL  +   G +A   ++H+MV+ 
Sbjct: 238 TKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLD 297

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E  + +  A++ MY +   ++DA   FD ++      W  ++  Y          + 
Sbjct: 298 RELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQI 357

Query: 268 FNNMGLAGAELTRSTFVSVIKLCA--TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
              M   G +    TF++++  C     ++ +  + L S+  +  +D    I T ++  +
Sbjct: 358 LERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMF 417

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           S+   M  A + F  + + K V ++TAMI+G+  N     A+  F +M R  V  +    
Sbjct: 418 SRFSSMILAREAFDKISQ-KSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVL 476

Query: 386 SIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           ++ ++A  ++   +    +H   +     +   V TAL++ Y + G +++A+ VF  I+ 
Sbjct: 477 AVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIER 536

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            D +AWSAM+A   + GD  GAV +  ++  +G +P   T   V+ AC       E  ++
Sbjct: 537 PDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARK 596

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI---CGYAQ 558
            H+  +    ++   V  A++ MY+K G+I+ A   F +    D+ +W +M+   C   +
Sbjct: 597 VHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGK 656

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           +  + +AL++ + M++  +  D +TF+ ++TAC + G + E  +YF  M  ++ + P ME
Sbjct: 657 YNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEME 716

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPH----------- 667
           HY  +VD  +R G L++A D+I  +P   +  +W  +L  C+  +  P            
Sbjct: 717 HYVALVDTVARKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKI 776

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           ++ +  L +  +     W+E  RVRKLM DR +KKE G S I +KN  + F+AGD SHP 
Sbjct: 777 NNKLDPLGTGAHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPH 836

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
           + +IY++++ ++  +K  GY PDT YVL D+ ++ KE +L  HSERLA+A+G + TP G 
Sbjct: 837 TREIYAEVDRITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQ 896

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
           PL+++KNLRVCGDCHT  KL +K+ +R+I+VRD  RFHHF K+G CSCGDYW
Sbjct: 897 PLRVIKNLRVCGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/650 (23%), Positives = 295/650 (45%), Gaps = 31/650 (4%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR 134
           P    +   VL+ C  L     G +VH    +S    +  V   LV +Y    N  + RR
Sbjct: 60  PFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARR 119

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           +FD +   N++S+T+++  Y      D  L++ H  +++  K +    +  +     +  
Sbjct: 120 IFDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRD 179

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR----DSITWNS 250
           ++     H  + + G ++   V  +LI MY     +  A   FD    R    D ++W  
Sbjct: 180 LSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTK 239

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           ++A    +  ++ A + F+ M   G    R  FV+V+       ++   +++HS VL   
Sbjct: 240 ILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRE 299

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           ++ D  I T ++  Y++ G ++DA + F  + +   V +WT +I  + + G+ +  +   
Sbjct: 300 LERDSMIGTAVVKMYARIGSIQDACRAFDRI-DQPGVAAWTVLIGAYCRLGSFNSVMQIL 358

Query: 371 CQMTREGVRPNGFTYSIILTA------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
            +M  EGV+PN  T+  IL        +       + +   + + + S  +GTA++  + 
Sbjct: 359 ERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFS 418

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           +   +  A + F+ I +K + A++AM+AGYA       A+ I++++    V  +    + 
Sbjct: 419 RFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAV 478

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
            I+AC A    +E+GK  H  ++   L+    V +ALV MYS+ G++E AS VF    + 
Sbjct: 479 AISAC-ASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERP 537

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D ++W++MI    +HG  + A+ +   M++      G T +GV+ AC HAG+++E  +  
Sbjct: 538 DTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKV 597

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA-CRLIS 663
             ++ +       E    ++ +Y++ G +++A +  +++        W T+L A CRL  
Sbjct: 598 HSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCRLGK 656

Query: 664 LQPHDSAI-----------------YVLLSNMYAATGHWQERARVRKLMN 696
               D A+                 +V +    A  GH QE  R  K M 
Sbjct: 657 YNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMK 706


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/777 (31%), Positives = 416/777 (53%), Gaps = 25/777 (3%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            Q LF   P+RN V +  L+     +   +EAL  +  +RR G+P   +  ++V+  CG L
Sbjct: 401  QRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSL 460

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             + V G QV  + + SG    V+V+ SL+ ++     V D  ++FD M E + +SW +++
Sbjct: 461  ENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMI 520

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            S Y+   +  +   +F  M+  G++P++ T  +++ V A     +    +H++ +++  +
Sbjct: 521  SMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLD 580

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +V NAL++MY  +  + DA  +F  M  RD I+WN+M++ YV N    +A +T   +
Sbjct: 581  SSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQL 640

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                      TF S +  C++   L   + +H+ VL+  +  +  +   L+  Y KC  M
Sbjct: 641  FHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSM 700

Query: 332  EDASKIFSMMREMKDVVSWTAMISGH--LQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            EDA K+F  M    D+VS+  +I G+  L++G    A+  F  M   G++PN  T   I 
Sbjct: 701  EDAEKVFQSM-PTHDIVSYNVLIGGYAVLEDGTK--AMQVFSWMRSAGIKPNYITMINIH 757

Query: 390  TAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
             +  + +        +HA+II+T +     V  +L+  Y K G L+ +  +F  I  K+I
Sbjct: 758  GSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNI 817

Query: 445  VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
            V+W+A++A   Q+G  E A+K++  +   G K +    +  +++C A  A++E+G Q H 
Sbjct: 818  VSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSC-ASLASLEEGMQLHG 876

Query: 505  CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
              +K+ L++   V +A + MY K G ++   +V   Q  R    WN++I GYA++G+ K+
Sbjct: 877  LGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKE 936

Query: 565  ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
            A E FK+M     + D +TF+ +++AC+HAGLVD+G  Y++ M +   + P ++H  C+V
Sbjct: 937  AEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIV 996

Query: 625  DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
            DL  R G   +A   I  MP   +  +WR++L++ R              L+ L P D +
Sbjct: 997  DLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDS 1056

Query: 671  IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
             YVLLSN+YA    W +  ++R  M    + K    SW+++KN+  +F  GD  H  + +
Sbjct: 1057 AYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEK 1116

Query: 731  IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
            IY+KL+E+  +L++ GY  DTS  L D D+E KE  L  HSE+LA+A+GL+  P G+
Sbjct: 1117 IYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGS 1173



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 170/614 (27%), Positives = 316/614 (51%), Gaps = 9/614 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GC 90
           LFD    R    +   +    R   H +A  +  G+R  G+PL G  L+S++  C   G 
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                 G  +H    ++G   +V + T+L+ LY     V D +R+F +M E NVVSWT+L
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +   + N   +  L  + +M+ +G+  N+  F+TV+ +          +QV + VI +G 
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL 478

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +   SV N+LI+M+     V DA  +FD ME+ D+I+WN+M++ Y    +  + F  F++
Sbjct: 479 QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD 538

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G     +T  S++ +CA++        +HS  L++ +D    +   L+  YS  GK
Sbjct: 539 MRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 598

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           + DA  +F  M   +D++SW  MIS ++QN     A+    Q+      PN  T+S  L 
Sbjct: 599 LSDAEFLFWNMSR-RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALG 657

Query: 391 A--QPA--VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   P   +    VHA +++ + +++  VG +L+  Y K   +++A KVF+ +   DIV+
Sbjct: 658 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 717

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           ++ ++ GYA + D   A++++  + S G+KPN  T  ++  +  + +     G+  HA  
Sbjct: 718 YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYI 777

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           I+    +   V+++L+TMY+K GN+ES++ +F     +++VSWN++I    Q GH ++AL
Sbjct: 778 IRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEAL 837

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++F +M+    + D +     +++C     ++EG Q   + +       +    + M D+
Sbjct: 838 KLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM-DM 896

Query: 627 YSRAGMLEKAMDII 640
           Y + G +++ + ++
Sbjct: 897 YGKCGKMDEMLQVV 910


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/731 (33%), Positives = 410/731 (56%), Gaps = 25/731 (3%)

Query: 32  QSLFDRSPQ-RNFVEYNRLLFEYCRDS-LHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           ++L  R P   + V +N ++  Y + S +  E   L+  +R  GL    ST +S+L    
Sbjct: 152 RTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAA 211

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
                + GRQVH   V+ G   +V V +SL++LY +   + D   VFD   E NVV W +
Sbjct: 212 NATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNA 271

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +L+G  RN+     +++F  M+  G++ + FT+ +VLG  A         QV  + IKN 
Sbjct: 272 MLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNC 331

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +    V NA + M+ K   + DA+ +F+ +  +D+++WN+++ G   NE   EA     
Sbjct: 332 MDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLK 391

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M L G      +F +VI  C+  +     +Q+H   +K+ I  +H + + L+  YSK G
Sbjct: 392 GMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHG 451

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E   K+ + + +   +V    +I+G +QN   D A++ F Q+ R+G++P+ FT+S IL
Sbjct: 452 DVESCRKVLAQV-DASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSIL 510

Query: 390 TA----QPAVSPFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKD 443
           +       ++   QVH + +K+ +     SVG +L+  Y+K  + ++A K+  E+ D K+
Sbjct: 511 SGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKN 570

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V W+A+++GYAQ G +  ++  + ++ S  V P+E TF+S++ AC+  + A+  GK+ H
Sbjct: 571 LVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMT-ALSDGKEIH 629

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHT 562
              IK+   +    +SA++ MYSK G+I S+ E FK  + K+D+  WNSMI G+A++G+ 
Sbjct: 630 GLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYA 689

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            +AL +F++M+   ++ D +TF+GV+ AC HAGL+ EG+ YFD M   + I P ++HY+C
Sbjct: 690 DEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYAC 749

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
            +DL  R G L++A ++IN +PF     +W T LAACR              L+ L+P +
Sbjct: 750 FIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQN 809

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           S+ YVLLSNMYAA G+W E    R+ M ++   K  G SWI V NKT  FL  D +H  +
Sbjct: 810 SSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGA 869

Query: 729 NQIYSKLEELS 739
            +IY  L+ L+
Sbjct: 870 LRIYEMLDNLT 880



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 166/586 (28%), Positives = 275/586 (46%), Gaps = 47/586 (8%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L++ L  C  L   V G+Q HC+  K G       + +LV++Y R   V D RRVF  ++
Sbjct: 34  LAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGIS 93

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + V W S++SGY R       + LF RM+  G  P+  T                   
Sbjct: 94  LPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVT------------------- 134

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS-ITWNSMVAGYVTNE 259
                           C A++        + DAR +   M    S + WN++++GY    
Sbjct: 135 ----------------CVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQS 178

Query: 260 -LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            +  E F  + +M   G   TRSTF S++   A        RQ+H+  +++G+D +  + 
Sbjct: 179 GIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVG 238

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           + L+  Y+KCG + DA  +F    E K+VV W AM++G ++N     A+  F  M R G+
Sbjct: 239 SSLINLYAKCGCIGDAILVFDCSGE-KNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGL 297

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
             + FTY  +L A   +       QV    IK   + S  V  A L+ + K G +D+A  
Sbjct: 298 EADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKT 357

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F LI  KD V+W+A+L G     + E A+ + + +  +GV P+E +F++VINAC+    
Sbjct: 358 LFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIR- 416

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A E GKQ H  ++K  + +   V S+L+  YSK G++ES  +V  +     +V  N +I 
Sbjct: 417 ATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIA 476

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE--GQQYFDIMVNEHH 612
           G  Q+    +A+++F+++ R  L+    TF  +++ CT  GL+    G+Q     +    
Sbjct: 477 GLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT--GLLSSIIGKQVHCYTLKSGF 534

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +         +V  Y +A M E A  ++  MP   +   W  +++ 
Sbjct: 535 LNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSG 580



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 236/503 (46%), Gaps = 45/503 (8%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G++P+ F  +  L   +  G + +  Q H    K G         AL++MY +   V DA
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R VF G+   D++ W SM++GY       EA   F  M   G+   R T V+V+  CA T
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV--CALT 143

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
                                              G++EDA  +   M      V+W A+
Sbjct: 144 ---------------------------------ALGRLEDARTLLHRMPAPSSTVAWNAV 170

Query: 354 ISGHLQNGAIDLAV-NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
           ISG+ Q   I+  V   +  M   G+ P   T++ +L+A    + F    QVHA  ++  
Sbjct: 171 ISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHG 230

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
            + +  VG++L+N Y K G + +A  VF+   EK++V W+AML G  +      A++++ 
Sbjct: 231 LDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFL 290

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            +   G++ +EFT+ SV+ AC    +    G+Q    +IK  ++ +L V++A + M+SK 
Sbjct: 291 YMKRLGLEADEFTYVSVLGACAHLDSHC-LGRQVQCVTIKNCMDASLFVANATLDMHSKF 349

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G I+ A  +F     +D VSWN+++ G   +   ++A+ + K M    +  D ++F  VI
Sbjct: 350 GAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVI 409

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC++    + G+Q    +  +H I       S ++D YS+ G +E    ++ ++   AS
Sbjct: 410 NACSNIRATETGKQ-IHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVD--AS 466

Query: 649 ATVWRTVLAACRLISLQPHDSAI 671
           + V R VL A  L+     D AI
Sbjct: 467 SIVPRNVLIA-GLVQNNREDEAI 488



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 40/233 (17%)

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           V+  R     GV+P++F  ++ ++AC+   A V  GKQ H  + K  L +    ++ALV 
Sbjct: 16  VRARRCSAGGGVRPDQFDLAATLSACSRLGALV-SGKQAHCDAEKRGLGSGAFCAAALVN 74

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           MY++ G +  A  VF      D V W SMI GY + G  ++A+ +F  M +     D +T
Sbjct: 75  MYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVT 134

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            + V+ A T                                      G LE A  +++RM
Sbjct: 135 CVAVVCALT------------------------------------ALGRLEDARTLLHRM 158

Query: 644 PFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           P  +S   W  V++     S   H+  ++ L  +M    G W  R+    +++
Sbjct: 159 PAPSSTVAWNAVISGYAQQSGIEHE--VFGLYKDMR-CWGLWPTRSTFASMLS 208


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/662 (36%), Positives = 371/662 (56%), Gaps = 23/662 (3%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVAGY 255
           A Q+HT +I N    +  + N LI++Y K   +  A  +F       +  +TW S++   
Sbjct: 161 ATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHL 220

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
               +H++A   FN M  +G    + TF S++   A T  +   +QLHS + K+G D + 
Sbjct: 221 SHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANI 280

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + T L+  Y+KC  M  A ++F  M E +++VSW +MI G   N   D AV  F  + R
Sbjct: 281 FVGTALVDMYAKCADMHSAVRVFDQMPE-RNLVSWNSMIVGFFHNNLYDRAVGVFKDVLR 339

Query: 376 EG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           E  V PN  + S +L+A   +       QVH  ++K        V  +L++ Y K    D
Sbjct: 340 EKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFD 399

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           E  K+F+ + ++D+V W+ ++ G+ Q    E A   +  +  EG+ P+E +FS+V+++ +
Sbjct: 400 EGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS-S 458

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A  AA+ QG   H   IK      +C+  +L+TMY+K G++  A +VF+     +++SW 
Sbjct: 459 ASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWT 518

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           +MI  Y  HG   + +E+F+ M  + +E   +TF+ V++AC+H G V+EG  +F+ M   
Sbjct: 519 AMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKI 578

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR---------- 660
           H + P  EHY+CMVDL  RAG L++A   I  MP   + +VW  +L ACR          
Sbjct: 579 HDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGRE 638

Query: 661 ----LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTY 716
               L  ++P++   YVLL+NM   +G  +E   VR+LM    V+KE G SWI+VKN T+
Sbjct: 639 AAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTF 698

Query: 717 SFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAI 776
            F A D SH  S++IY  LE+L   +K  GY  +T +V   +++  +E  L  HSE+LA+
Sbjct: 699 VFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLAL 758

Query: 777 AFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
           AFGL+  P  +P++I KNLR CG CHTV+KL SK+  R+I+VRD NRFH F +G CSCGD
Sbjct: 759 AFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGD 818

Query: 837 YW 838
           YW
Sbjct: 819 YW 820



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 260/517 (50%), Gaps = 10/517 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE--SNVVSWTSLLSGYAR 156
           Q+H + + + +     +  +L++LY +   +     +F   +     +V+WTSL++  + 
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSH 222

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
             M+ + L LF++M+  G  PN FTFS++L   A   +V    Q+H+++ K+G +    V
Sbjct: 223 FNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFV 282

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ MY K   +  A  VFD M +R+ ++WNSM+ G+  N L+  A   F ++     
Sbjct: 283 GTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT 342

Query: 277 ELTRSTFV-SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            +     V SV+  CA    L   RQ+H  V+K G+     +   LM  Y KC   ++  
Sbjct: 343 VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGV 402

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           K+F  + + +DVV+W  ++ G +QN   + A N+F  M REG+ P+  ++S +L +  ++
Sbjct: 403 KLFQCVGD-RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASL 461

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +       +H  IIK  Y K+  +  +L+  Y K G L +A +VFE I++ ++++W+AM+
Sbjct: 462 AALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMI 521

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           + Y   G     ++++  + SEG++P+  TF  V++AC+      E    F++      +
Sbjct: 522 SAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDM 581

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKALEVFK 570
           N      + +V +  + G ++ A    +    +   S W +++    ++G+ K   E  +
Sbjct: 582 NPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAE 641

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
            +   +  ++   ++ +   CT +G ++E  +   +M
Sbjct: 642 RLFEME-PYNPGNYVLLANMCTRSGRLEEANEVRRLM 677



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 224/461 (48%), Gaps = 17/461 (3%)

Query: 41  RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQV 100
           +  V +  L+      ++H +AL+LF  +R  G      T SS+L         + G+Q+
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN 160
           H    K GF  ++ V T+LVD+Y +  ++    RVFD M E N+VSW S++ G+  N + 
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327

Query: 161 DRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
           DR + +F   ++ + + PN  + S+VL   A+ G +    QVH +V+K G   +T V N+
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L+ MY K +   +   +F  + DRD +TWN +V G+V N+   EA   F  M   G    
Sbjct: 388 LMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPD 447

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
            ++F +V+   A+   L     +H Q++K G   +  I   L+  Y+KCG + DA ++F 
Sbjct: 448 EASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFE 507

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------Q 392
            + E  +V+SWTAMIS +  +G  +  +  F  M  EG+ P+  T+  +L+A       +
Sbjct: 508 GI-EDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVE 566

Query: 393 PAVSPFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA-WSAM 450
             ++ F     I   N   + ++    LL    + G LDEA +  E +  K   + W A+
Sbjct: 567 EGLAHFNSMKKIHDMNPGPEHYACMVDLLG---RAGWLDEAKRFIESMPMKPTPSVWGAL 623

Query: 451 LAGYAQIGDTE-GAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           L    + G+ + G     R    E   P  +    + N CT
Sbjct: 624 LGACRKYGNLKMGREAAERLFEMEPYNPGNYVL--LANMCT 662



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 1/261 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGCLF 92
           +FD+ P+RN V +N ++  +  ++L+  A+ +F  + R    +    ++SSVL  C  + 
Sbjct: 302 VFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG 361

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              FGRQVH   VK G      V  SL+D+Y +    ++G ++F  + + +VV+W  L+ 
Sbjct: 362 GLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVM 421

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G+ +N   +     F  M+ EGI P+  +FSTVL   A    +     +H  +IK G   
Sbjct: 422 GFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVK 481

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              +  +LI+MY K   + DA  VF+G+ED + I+W +M++ Y  +    +  E F +M 
Sbjct: 482 NMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHML 541

Query: 273 LAGAELTRSTFVSVIKLCATT 293
             G E +  TFV V+  C+ T
Sbjct: 542 SEGIEPSHVTFVCVLSACSHT 562



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 90/162 (55%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF     R+ V +N L+  + ++   +EA N F  +RR G+    ++ S+VL +   L  
Sbjct: 404 LFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAA 463

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  +H + +K G+ +++ +  SL+ +Y +  ++ D  +VF+ + + NV+SWT+++S 
Sbjct: 464 LHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISA 523

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           Y  +   ++V+ELF  M  EGI+P+  TF  VL   +  G V
Sbjct: 524 YQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRV 565


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/578 (38%), Positives = 345/578 (59%), Gaps = 21/578 (3%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           S + ++++ C  ++ +R  RQLH+++L +G   D  + T L+  Y+ CG +  A ++F  
Sbjct: 69  SNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDE 128

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF- 398
           M    +V  W  +I  + ++G  + A+  +  M   G ++P+ FTY  +L A  A+    
Sbjct: 129 MPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLS 188

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              +VH  +++TN+     V T L++ Y K G +DEA  VF     +D   W++M+A   
Sbjct: 189 AGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACG 248

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G    A+ + R + +EG+ P   T  S I+A  A ++A+ +G++ H    +    +  
Sbjct: 249 QNGRPAEALTLCRNMAAEGIAPTIATLVSAISA-AAVASALPRGRELHGYGWRRGFGSQD 307

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            + ++L+ MY+K G +  A  +F++   R+L+SWN+MICG+  HGH   A E+F  MR +
Sbjct: 308 KLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSE 367

Query: 576 -DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  D ITF+GV++AC H G+V E ++ FD+MV  + I PT++HY+C+VD+   +G  +
Sbjct: 368 AQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFK 427

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A D+I  M     + +W  +L  C+              LI L+P D+  YVLLSN+YA
Sbjct: 428 EASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYA 487

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
            +G W+E ARVRKLM +R +KK    SWIE+K K + FL GD SHP+S+ IY +LE L  
Sbjct: 488 ESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLEG 547

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
            +   GY PDT+ V  +++D+ K  ++  HSERLAIAFGL++TP    L + KNLRVC D
Sbjct: 548 LISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCED 607

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH VIKLIS++E+R+I++RD NR+HHF  G CSC D+W
Sbjct: 608 CHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 183/392 (46%), Gaps = 18/392 (4%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR 134
           P   S  +++L++C        GRQ+H   + SG   D  ++T LVDLY    +V   RR
Sbjct: 65  PYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARR 124

Query: 135 VFDDM-NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADE 192
           VFD+M N+ NV  W  L+  YAR+   +  +EL+  M   G +KP++FT+  VL   A  
Sbjct: 125 VFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAAL 184

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             ++   +VH  V++        VC  LI MY K   + +A AVF+    RD+  WNSM+
Sbjct: 185 LDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMI 244

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           A    N    EA     NM   G   T +T VS I   A    L   R+LH    + G  
Sbjct: 245 AACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFG 304

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
               ++T L+  Y+K G +  A  +F  +   ++++SW AMI G   +G  D A   F +
Sbjct: 305 SQDKLKTSLLDMYAKSGWVMVAHVLFEQLLH-RELISWNAMICGFGMHGHADHAFELFSR 363

Query: 373 MTREG-VRPNGFTYSIILTA-------QPAVSPFQ--VHAHIIKTNYEKSFSVGTALLNA 422
           M  E  V P+  T+  +L+A       Q A   F   V  + IK   +      T L++ 
Sbjct: 364 MRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHY----TCLVDV 419

Query: 423 YVKKGILDEAAKVFE-LIDEKDIVAWSAMLAG 453
               G   EA+ V + ++ + D   W A+L G
Sbjct: 420 LGHSGRFKEASDVIKGMLVKPDSGIWGALLNG 451



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 151/339 (44%), Gaps = 4/339 (1%)

Query: 32  QSLFDRSP-QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCG 89
           + +FD  P Q N   +N L+  Y RD   + A+ L+  +   G +     T   VLK C 
Sbjct: 123 RRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACA 182

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L D   GR+VH   +++ +A DV V T L+D+Y +   +++   VF+D    +   W S
Sbjct: 183 ALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNS 242

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++   +N      L L   M  EGI P   T  + +   A    +    ++H    + G
Sbjct: 243 MIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRG 302

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 +  +L+ MY KS  V  A  +F+ +  R+ I+WN+M+ G+  +     AFE F+
Sbjct: 303 FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFS 362

Query: 270 NM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHS-QVLKNGIDFDHNIRTGLMVAYSK 327
            M   A       TFV V+  C     ++ A+++    V    I       T L+     
Sbjct: 363 RMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGH 422

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            G+ ++AS +   M    D   W A+++G   +  ++LA
Sbjct: 423 SGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELA 461


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/699 (34%), Positives = 378/699 (54%), Gaps = 26/699 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL------PLFGSTLSSVLKT 87
           LFD  P RN V +   +  Y +     +AL LF      G       P     L+S L+ 
Sbjct: 87  LFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRA 146

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C       FG QVH    K G   +V V T+LV+LY +   ++    VFD +   N V+W
Sbjct: 147 CAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTW 206

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T++++GY++       LELF RM ++G++P+ F  ++     +  G V    Q+H    +
Sbjct: 207 TAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYR 266

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E   SV NALI +Y K   +  AR +FD ME+R+ ++W +M+AGY+ N L  EA   
Sbjct: 267 TAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSM 326

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  +  AG +       S++  C +   +   RQ+H+ V+K  ++ D  ++  L+  Y+K
Sbjct: 327 FWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAK 386

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           C  + +A  +F  + E  D +S+ AMI G+ + G +  AV  F +M    ++P+  T+  
Sbjct: 387 CEHLTEARAVFEALAE-DDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVS 445

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L    + S      Q+H  I+K+        G+AL++ Y K  ++D+A  VF L+  +D
Sbjct: 446 LLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRD 505

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V W+AM+ G AQ    E AVK++ +L   G+ PNEFTF +++   +   A++  G+QFH
Sbjct: 506 MVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVAST-LASIFHGQQFH 564

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           A  IKA  ++   +S+AL+ MY+K G IE    +F+    +D++ WNSMI  YAQHGH +
Sbjct: 565 AQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAE 624

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +AL VF  M    +E + +TF+ V++AC HAGLVDEG  +F+ M  ++ + P  EHY+ +
Sbjct: 625 EALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASV 684

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLIS--------------LQPHDS 669
           V+L+ R+G L  A + I RMP    AT+WR++L+AC L                  P DS
Sbjct: 685 VNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADS 744

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
              VL+SN+YA+ G W +  ++R+ M+   V KE GYSW
Sbjct: 745 GPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783



 Score =  278 bits (712), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 188/641 (29%), Positives = 318/641 (49%), Gaps = 47/641 (7%)

Query: 78  GSTLSSVLKTC--GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV 135
           G +L+ +L +C  G     V     H   V SG   D+ ++  L+  Y +   + D RR+
Sbjct: 29  GGSLAQLLLSCLAGDRLRRVL-PPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRL 87

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM------QVEGIKPNSFTFSTVLGVL 189
           FD M   N+VSW S +S YA++   D  L LF           +G  PN F  ++ L   
Sbjct: 88  FDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRAC 147

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
           A         QVH +  K G +    V  AL+++Y K+  +  A +VFD +  R+ +TW 
Sbjct: 148 AQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWT 207

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           +++ GY        A E F  MGL G    R    S    C+    +   RQ+H    + 
Sbjct: 208 AVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRT 267

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
             + D ++   L+  Y KC ++  A ++F  M E +++VSWT MI+G++QN     A++ 
Sbjct: 268 AAESDASVVNALIDLYCKCSRLLLARRLFDSM-ENRNLVSWTTMIAGYMQNSLDTEAMSM 326

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F Q+++ G +P+ F  + IL +  +++      QVHAH+IK + E    V  AL++ Y K
Sbjct: 327 FWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAK 386

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
              L EA  VFE + E D ++++AM+ GYA++GD  GAV+I+ ++    +KP+  TF S+
Sbjct: 387 CEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSL 446

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           +   ++ S  +E  KQ H   +K+  +  L   SAL+ +YSK   ++ A  VF   + RD
Sbjct: 447 LGVSSSRS-DLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRD 505

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           +V WN+MI G AQ+   ++A+++F  +R   L  +  TF+ ++T  +    +  GQQ+  
Sbjct: 506 MVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHA 565

Query: 606 IMV-----NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            ++     ++ HI       + ++D+Y++ G +E+      R+ F   +T+ + V+    
Sbjct: 566 QIIKAGADSDPHI------SNALIDMYAKCGFIEE-----GRLLF--ESTLGKDVICWNS 612

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
           +IS               YA  GH +E   V  +M    V+
Sbjct: 613 MIS--------------TYAQHGHAEEALHVFGMMEGAGVE 639



 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 278/530 (52%), Gaps = 14/530 (2%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTCG 89
           S+FD  P RN V +  ++  Y +      AL LF    R+GL         L+S    C 
Sbjct: 193 SVFDALPARNPVTWTAVITGYSQAGQAGVALELF---GRMGLDGVRPDRFVLASAASACS 249

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     GRQ+H    ++    D +V  +L+DLY + + +   RR+FD M   N+VSWT+
Sbjct: 250 GLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTT 309

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++GY +N ++   + +F ++   G +P+ F  +++L        +    QVH  VIK  
Sbjct: 310 MIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKAD 369

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    V NALI MY K + + +ARAVF+ + + D+I++N+M+ GY        A E F 
Sbjct: 370 LESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFG 429

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M     + +  TFVS++ + ++  +L L++Q+H  ++K+G   D    + L+  YSK  
Sbjct: 430 KMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFS 489

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++DA  +FS+M+  +D+V W AMI G  QN   + AV  F ++   G+ PN FT+  ++
Sbjct: 490 LVDDAKLVFSLMQN-RDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALV 548

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           T    ++      Q HA IIK   +    +  AL++ Y K G ++E   +FE    KD++
Sbjct: 549 TVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVI 608

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHA 504
            W++M++ YAQ G  E A+ ++  +   GV+PN  TF SV++AC A +  V++G   F++
Sbjct: 609 CWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSAC-AHAGLVDEGLHHFNS 667

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMI 553
              K  +       +++V ++ + G + +A E  +R     + + W S++
Sbjct: 668 MKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLL 717



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 158/336 (47%), Gaps = 23/336 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F+   + + + YN ++  Y R      A+ +F  +R   L     T  S+L      
Sbjct: 394 RAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSR 453

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D    +Q+H   VKSG + D+   ++L+D+Y + + V+D + VF  M   ++V W +++
Sbjct: 454 SDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMI 513

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A+N+  +  ++LF R++V G+ PN FTF  ++ V +    +    Q H  +IK G +
Sbjct: 514 FGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGAD 573

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + NALI MY K   + + R +F+    +D I WNSM++ Y  +    EA   F  M
Sbjct: 574 SDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMM 633

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA------- 324
             AG E    TFVSV+  CA           H+ ++  G+   ++++T   V        
Sbjct: 634 EGAGVEPNYVTFVSVLSACA-----------HAGLVDEGLHHFNSMKTKYAVEPGTEHYA 682

Query: 325 -----YSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
                + + GK+  A +    M        W +++S
Sbjct: 683 SVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLS 718


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/672 (35%), Positives = 373/672 (55%), Gaps = 55/672 (8%)

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---ARAVFDGME 241
           V+ +L +   +   +Q+H ++IK   +    V   L+          D   AR+VFD + 
Sbjct: 6   VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS-VIKLCATTKELRLAR 300
             D+  WN+M+  Y+ ++   E+   F  M         S  +S VI+ C   K+    +
Sbjct: 66  SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           +LH+QVLK G+  D  + T L+  Y+K G +E A  I   M    D+V +  +++ +++ 
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAH-PDLVPYNVLLAEYVRV 184

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALL 420
           G I+LA + F +M                                    E+       ++
Sbjct: 185 GEINLAHDLFDRMP-----------------------------------ERDLVSWNTMI 209

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + +   G +  A K+F+   E+D+++WS+M+A YA+   +  A++++ ++    V P++ 
Sbjct: 210 HGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKV 269

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T  SV++AC     A+  GK  H C  + ++   L + ++LV MY+K G+I+++  VF  
Sbjct: 270 TMVSVLSAC-GDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNG 328

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              RD+ +W++MI G A HG  + AL+ F +M  +D++ + +TFIGV++AC+H GLVDEG
Sbjct: 329 MNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEG 388

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
             YF  M   + + P +EHY C+VD+  RAG L++AM++I  MPFA  A VWR +L ACR
Sbjct: 389 WTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACR 448

Query: 661 --------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                         L+ L+PH    YVLLSN+Y+    W +   VR++M +  ++K  G 
Sbjct: 449 IYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGS 508

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           S IEV N  + F+AGD SHP+S +I   L E++ RLK  GY P T+ VLQD D++ KE  
Sbjct: 509 SSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENA 568

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           L+ HSE+LAIAFGL++T  G+ ++IVKNLRVC DCH  IKLIS+  +R I+VRD NRFHH
Sbjct: 569 LAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHH 628

Query: 827 FKEGLCSCGDYW 838
           F  G CSC DYW
Sbjct: 629 FVNGSCSCKDYW 640



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 183/448 (40%), Gaps = 91/448 (20%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDMNESNVVSWTSLLSGYA 155
           Q+H   +K+    +  V   L+      ++  D    R VFD++   +   W +++  Y 
Sbjct: 21  QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80

Query: 156 RNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGE 211
            ++     + LF +M+  E I  +S++ S V+   G L D G      ++HT V+K G  
Sbjct: 81  NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPG---NGQKLHTQVLKIGLG 137

Query: 212 VVTSVCNALISMYLKSKMVRDARAV-------------------------------FDGM 240
               V  ALI MY K   +  AR +                               FD M
Sbjct: 138 SDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRM 197

Query: 241 EDRDSITWN-------------------------------SMVAGYVTNELHMEAFETFN 269
            +RD ++WN                               SM+A Y       EA   F+
Sbjct: 198 PERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFH 257

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M LA     + T VSV+  C     L + + +H  + +N I+ D  + T L+  Y+KCG
Sbjct: 258 EMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCG 317

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++++ ++F+ M   +DV +W+AMI G   +G  +LA++ F +M  E ++PN  T+  +L
Sbjct: 318 DIDNSLRVFNGMNN-RDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVL 376

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-------EK 442
           +A   +           T+  K + V   + +      IL  A ++ E ++         
Sbjct: 377 SACSHIGLVD-EGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAP 435

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           D + W A+L          GA +IY+ +
Sbjct: 436 DAIVWRALL----------GACRIYKNV 453



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 92/165 (55%), Gaps = 2/165 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFDR+ +R+ + ++ ++  Y +     EAL LF  ++   +     T+ SVL  CG +
Sbjct: 222 KKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDV 281

Query: 92  FDHVFGRQVHCECV-KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G+ +H EC+ ++    D+ + TSLVD+Y +  ++++  RVF+ MN  +V +W+++
Sbjct: 282 GALGMGKMIH-ECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAM 340

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           + G A +   +  L+ F +M  E IKPN  TF  VL   +  G+V
Sbjct: 341 IMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLV 385


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/710 (33%), Positives = 386/710 (54%), Gaps = 43/710 (6%)

Query: 150 LLSGYARNKMNDRVLELFHRMQV-EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           L+S Y  N +       +  M+  +    ++F   ++L   A         ++H    KN
Sbjct: 58  LISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKN 117

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G      VCNAL++MY K   +  AR VFD M +RD ++W +M+  YV ++   EA    
Sbjct: 118 GFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLV 177

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID--FDHNIRTGLMVAYS 326
             M   G +L+    +S+I +     +++  R +H  +++N  D   + ++ T L+  Y 
Sbjct: 178 REMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC 237

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           K G +  A ++F  + + + VVSWT MI+G +++  +D     F +M  E + PN  T  
Sbjct: 238 KGGCLASAQRLFDRLSK-RSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLL 296

Query: 387 IILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            ++T    V    +    HA++++  +  S ++ TAL++ Y K G +  A  +F  + +K
Sbjct: 297 SLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKK 356

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+  WS +++ YA +   +    ++ ++ +  VKPN  T  S+++ C A + A++ GK  
Sbjct: 357 DVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLC-AEAGALDLGKWT 415

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           HA   +  L   + + +AL+ MY+K G++  A  +F    +RD+  WN+M+ G++ HG  
Sbjct: 416 HAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCG 475

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           K+ALE+F EM    +E + ITF+ +  AC+H+GL                    MEHY C
Sbjct: 476 KEALELFSEMESHGVEPNDITFVSIFHACSHSGL--------------------MEHYGC 515

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHD 668
           +VDL  RAG L++A +II  MP   +  +W  +LAAC+L              + L P +
Sbjct: 516 LVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQN 575

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
               VL SN+YA+   W +   VR+ M+   +KKE G SWIEV    + F +GD +  Q+
Sbjct: 576 CGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQT 635

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            ++Y  + E+  +L+++GY P+T+ VL +ID+E KE+ LS HSE+LA AFGL++T  G P
Sbjct: 636 TKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTP 695

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++IVKNLR+C DCH   KL+SK+  R I+VRD NRFHHF EG CSC  YW
Sbjct: 696 IRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 270/564 (47%), Gaps = 41/564 (7%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSS 83
           PF+S   QS F  +P+ N   YN L+  Y  + L Q + N +L +R      L    L S
Sbjct: 42  PFFS---QSHF--TPEAN---YNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPS 93

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           +LK C        GR++H    K+GFA DV V  +L+++Y +   +   R VFD M E +
Sbjct: 94  LLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERD 153

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VVSWT++L  Y R+K     L L   MQ  G+K +     +++ V  +   + +   VH 
Sbjct: 154 VVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHG 213

Query: 204 MVIKNGGE--VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
            +++N G+  +  S+  ALI MY K   +  A+ +FD +  R  ++W  M+AG + +   
Sbjct: 214 YIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRL 273

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            E  + FN M          T +S+I  C     L L +  H+ +L+NG      + T L
Sbjct: 274 DEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTAL 333

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y KCG++  A  +F+ +++ KDV  W+ +IS +     +D   N F +M    V+PN
Sbjct: 334 IDMYGKCGQVGYARALFNGVKK-KDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPN 392

Query: 382 GFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
             T   +L+         +    HA+I +   E    + TAL+N Y K G +  A  +F 
Sbjct: 393 NVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFN 452

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
              ++DI  W+ M+AG++  G  + A++++ ++ S GV+PN+ TF S+            
Sbjct: 453 EAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSI------------ 500

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGY 556
               FHACS    + +  C    LV +  + G+++ A  + +    R + + W +++   
Sbjct: 501 ----FHACSHSGLMEHYGC----LVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAAC 552

Query: 557 AQHGHTKKALEVFKEMRRQDLEFD 580
             H    K L + +   R+ LE D
Sbjct: 553 KLH----KNLALGEVAARKILELD 572


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/675 (35%), Positives = 382/675 (56%), Gaps = 24/675 (3%)

Query: 97  GRQVHCECVKSGFARDVN-VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           G+ +H   +K  +    N ++ +L+  Y +  ++   + VF+++   NVVS+  L+ G +
Sbjct: 26  GQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLS 85

Query: 156 RN--KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA-DEGIVATAVQVHTMVIKNGGEV 212
            N  K ++ VLELF RM    I P++ TF  V    A + G    A QVH + IK     
Sbjct: 86  HNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASID 145

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V ++L++ Y K   V +AR +FD M +R+ ++W +M++GY + ++  EA   F  M 
Sbjct: 146 DVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMR 205

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
           L    L    F SV+      + +   +Q+H  V+KNG+    ++   L+  Y+KCG + 
Sbjct: 206 LVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLN 265

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            +  +F M  + K+ ++W+A+I+G+ Q G    A+  F +M   G  P+ FT   +L A 
Sbjct: 266 YSLMLFEMCSD-KNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKAC 324

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             V+      Q H +++K+ YE      TAL++ Y K G   +A K F+ + E D+V W+
Sbjct: 325 SDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWT 384

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +++AGY Q G  E A+ +Y ++    + PNE T +SV+ AC+   AA+EQGKQ HA +IK
Sbjct: 385 SIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNL-AALEQGKQIHARTIK 443

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L   L + SAL TMY+K G++E    +F+R  +RD+VSWN+MI G +Q+GH ++ALE+
Sbjct: 444 YGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALEL 503

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EMR +  + D ITF+ V++AC+H G+V  G  YF++M +E  + P +EHY+CMVD+ S
Sbjct: 504 FEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLS 563

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG L +A + I          +WR +L ACR              L+ L   +S+ YVL
Sbjct: 564 RAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVL 623

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LS++Y A G   +  RVR++M  R V+KE G SWIE+K+  + F+ GD  HPQ  +I   
Sbjct: 624 LSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGA 683

Query: 735 LEELSTRLKDAGYKP 749
           +  L   +KD GY+P
Sbjct: 684 IWRLRKHMKDDGYRP 698



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 195/371 (52%), Gaps = 6/371 (1%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY K     + + LFDR P+RN V +  ++  Y    + +EAL +F  +R +   L    
Sbjct: 156 FYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFV 215

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            +SVL    C      G+QVHC  VK+G    V+V  +LV +Y +  N+     +F+  +
Sbjct: 216 FTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCS 275

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           + N ++W++L++GY++   + + L+LF +M   G  P+ FT   VL   +D   +    Q
Sbjct: 276 DKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQ 335

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
            H  ++K+G E       AL+ MY K     DAR  FD + + D + W S++AGYV N  
Sbjct: 336 THGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGK 395

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
           + EA   +  M +        T  SV+K C+    L   +Q+H++ +K G+  + +IR+ 
Sbjct: 396 NEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSA 455

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L   Y+KCG +E+   IF  M + +D+VSW AMISG  QNG    A+  F +M  EG +P
Sbjct: 456 LSTMYAKCGSLEEGVLIFRRMLQ-RDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKP 514

Query: 381 NGFTYSIILTA 391
           +  T+  +L+A
Sbjct: 515 DHITFVTVLSA 525



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 133/258 (51%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+    +N + ++ L+  Y +     +AL LF  +   G      TL  VLK C  +  
Sbjct: 270 LFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAA 329

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q H   +KSG+   +  +T+LVD+Y +     D R+ FD + E ++V WTS+++G
Sbjct: 330 IEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAG 389

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y +N  N+  L ++ RMQ+  I PN  T ++VL   ++   +    Q+H   IK G    
Sbjct: 390 YVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPE 449

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            S+ +AL +MY K   + +   +F  M  RD ++WN+M++G   N    EA E F  M L
Sbjct: 450 LSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRL 509

Query: 274 AGAELTRSTFVSVIKLCA 291
            G +    TFV+V+  C+
Sbjct: 510 EGTKPDHITFVTVLSACS 527



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 96/163 (58%), Gaps = 4/163 (2%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSVLKTCGCLF 92
           FD   + + V +  ++  Y ++  ++EAL+++  + +R++ LP    T++SVLK C  L 
Sbjct: 372 FDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKI-LP-NELTMASVLKACSNLA 429

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+Q+H   +K G   ++++ ++L  +Y +  ++E+G  +F  M + ++VSW +++S
Sbjct: 430 ALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMIS 489

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           G ++N      LELF  M++EG KP+  TF TVL   +  GIV
Sbjct: 490 GLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIV 532


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/769 (33%), Positives = 391/769 (50%), Gaps = 129/769 (16%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD------------------- 238
           A  VH  ++ +G +    + N LI  Y KS  +  AR +FD                   
Sbjct: 15  ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74

Query: 239 --------------GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
                          M  RD++++N+M+  +  +     A + F  M   G      TF 
Sbjct: 75  AGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFS 134

Query: 285 SVI-KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK---------MEDA 334
           SV+  L     E    +QLH +V K G     ++   LM  Y  C           M  A
Sbjct: 135 SVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAA 194

Query: 335 SKIF------------------------------SMMREMKD--VVSWTAMISGHLQNGA 362
            K+F                               ++  M D   V+W AMISG++  G 
Sbjct: 195 RKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGF 254

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKS----FS 414
            + A +   +M   G++ + +TY+ +++A      F    QVHA++++T  + S     S
Sbjct: 255 YEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLS 314

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA------------------------- 449
           V  AL+  Y + G L EA +VF+ +  KD+V+W+A                         
Sbjct: 315 VNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRS 374

Query: 450 ------MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
                 M++G AQ G  E  +K++ Q+  EG++P ++ ++  I +C+    +++ G+Q H
Sbjct: 375 LLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSV-LGSLDNGQQLH 433

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           +  I+   +++L V +AL+TMYS+ G +E+A  VF      D VSWN+MI   AQHGH  
Sbjct: 434 SQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGV 493

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +A++++++M ++D+  D ITF+ +++AC+HAGLV EG+ YFD M   + I P  +HYS +
Sbjct: 494 QAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRL 553

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDS 669
           +DL  RAGM  +A ++   MPF   A +W  +LA C              RL+ L P   
Sbjct: 554 IDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQD 613

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             Y+ LSNMYAA G W E ARVRKLM +R VKKE G SWIEV+N  + FL  D  HP+ +
Sbjct: 614 GTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVH 673

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            +Y  LE+L   ++  GY PDT +VL D++ E KE  LS HSE+LA+ +G++  P GA +
Sbjct: 674 AVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATI 733

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++ KNLR+CGDCH   K ISK+  R+I+VRD  RFHHF+ G CSC +YW
Sbjct: 734 RVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 159/621 (25%), Positives = 267/621 (42%), Gaps = 120/621 (19%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           F R VH   + SGF     +   L+D Y ++ N+   R +FD + + ++V+ T++LS Y+
Sbjct: 14  FARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYS 73

Query: 156 R-------------NKMNDR--------------------VLELFHRMQVEGIKPNSFTF 182
                           M+ R                     L+LF +M+  G  P+ FTF
Sbjct: 74  AAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTF 133

Query: 183 STVLGVL---ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL---KSKMV------ 230
           S+VLG L   ADE       Q+H  V K G   V SV NAL+S Y+    S +V      
Sbjct: 134 SSVLGALSLIADEE--THCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLM 191

Query: 231 --------------RD-------------------ARAVFDGMEDRDSITWNSMVAGYVT 257
                         RD                   AR + +GM D  ++ WN+M++GYV 
Sbjct: 192 AAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVH 251

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID----F 313
              + EAF+    M   G +L   T+ SVI   +      + RQ+H+ VL+  +     F
Sbjct: 252 RGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHF 311

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIF----------------------------SMMREM- 344
             ++   L+  Y++CGK+ +A ++F                            S+ REM 
Sbjct: 312 VLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMP 371

Query: 345 -KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
            + +++WT MISG  QNG  +  +  F QM  EG+ P  + Y+  + +   +       Q
Sbjct: 372 VRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQ 431

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           +H+ II+  ++ S SVG AL+  Y + G+++ A  VF  +   D V+W+AM+A  AQ G 
Sbjct: 432 LHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGH 491

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
              A+++Y ++  E + P+  TF ++++AC+      E    F    +   +       S
Sbjct: 492 GVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYS 551

Query: 520 ALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
            L+ +  + G    A  V +    +     W +++ G   HG+ +  ++    +     +
Sbjct: 552 RLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQ 611

Query: 579 FDGITFIGVITACTHAGLVDE 599
            DG T+I +       G  DE
Sbjct: 612 QDG-TYISLSNMYAALGQWDE 631



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/556 (25%), Positives = 234/556 (42%), Gaps = 102/556 (18%)

Query: 29  KKDQSLFDRSPQ--RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           K    LF+ +P   R+ V YN ++  +        AL LF+ ++RLG      T SSVL 
Sbjct: 79  KLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLG 138

Query: 87  TCGCLFDH-VFGRQVHCECVKSGFA----------------------------------- 110
               + D     +Q+HCE  K G                                     
Sbjct: 139 ALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLF 198

Query: 111 -------RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
                  RD    T+++  Y+R +++   R + + M +   V+W +++SGY      +  
Sbjct: 199 DEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEA 258

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN----GGEVVTSVCNA 219
            +L  RM   GI+ + +T+++V+   ++ G+     QVH  V++      G  V SV NA
Sbjct: 259 FDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNA 318

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNS----------------------------- 250
           LI++Y +   + +AR VFD M  +D ++WN+                             
Sbjct: 319 LITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTW 378

Query: 251 --MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK 308
             M++G   N    E  + FN M L G E     +   I  C+    L   +QLHSQ+++
Sbjct: 379 TVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQ 438

Query: 309 NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
            G D   ++   L+  YS+CG +E A  +F  M  + D VSW AMI+   Q+G    A+ 
Sbjct: 439 LGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAMIAALAQHGHGVQAIQ 497

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT--NYEKSFSVG---------- 416
            + +M +E + P+  T+  IL+A         HA ++K   +Y  +  V           
Sbjct: 498 LYEKMLKEDILPDRITFLTILSACS-------HAGLVKEGRHYFDTMRVCYGITPEEDHY 550

Query: 417 TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
           + L++   + G+  EA  V E +  E     W A+LAG    G+ E  ++   +L  E +
Sbjct: 551 SRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLL-ELM 609

Query: 476 KPNEFTFSSVINACTA 491
              + T+ S+ N   A
Sbjct: 610 PQQDGTYISLSNMYAA 625


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/590 (39%), Positives = 349/590 (59%), Gaps = 19/590 (3%)

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A    ++M   G      T+  +IK C     +R  +++H  +  NG      +   L+ 
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y K   +E+A  +F  M E ++VVSWT MIS +      D A+     M R+GV PN F
Sbjct: 329 MYVKFNLLEEAQVLFDKMPE-RNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMF 387

Query: 384 TYSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
           T+S +L A   +    Q+H+ I+K   E    V +AL++ Y K G L EA KVF  +   
Sbjct: 388 TFSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTG 447

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D V W++++A +AQ  D + A+ +Y+ +   G   ++ T +SV+ ACT+ S  +E G+Q 
Sbjct: 448 DSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSL-LELGRQA 506

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H   +K   +  L +++AL+ MY K G++E A  +F R  K+D++SW++MI G AQ+G +
Sbjct: 507 HVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFS 564

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            +AL +F+ M+ Q  + + IT +GV+ AC+HAGLV+EG  YF  M N + I P  EHY C
Sbjct: 565 MEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGC 624

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           M+DL  RA  L+  + +I+ M        WRT+L ACR              ++ L P D
Sbjct: 625 MLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQD 684

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           +  YVLLSN+YA +  W + A VR+ M  R ++KE G SWIEV  + ++F+ GD SHPQ 
Sbjct: 685 TGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQI 744

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
           ++I  +L +   RL  AGY PDT++VLQD++ E +E  L  HSE+LAI FG+++ P    
Sbjct: 745 DEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKT 804

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++I KNL++CGDCH   KLI++LE+R IV+RD  R+HHF++G+CSCGDYW
Sbjct: 805 IRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 206/415 (49%), Gaps = 26/415 (6%)

Query: 50  LFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF 109
           L  +C       A+++   + R G+     T S ++K C        G++VH     +G+
Sbjct: 257 LLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGY 316

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
                ++  L+++Y++ N +E+ + +FD M E NVVSWT+++S Y+  ++NDR + L   
Sbjct: 317 HPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAF 376

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M  +G+ PN FTFS+VL        +    Q+H+ ++K G E    V +ALI +Y K   
Sbjct: 377 MFRDGVMPNMFTFSSVLRACER---LYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGE 433

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           + +A  VF  M   DS+ WNS++A +  +    EA   + +M   G    +ST  SV++ 
Sbjct: 434 LLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRA 493

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C +   L L RQ H  VLK   D D  +   L+  Y KCG +EDA  IF+ M + KDV+S
Sbjct: 494 CTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAK-KDVIS 550

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY 409
           W+ MI+G  QNG    A+N F  M  +G +PN  T   IL    A S    HA ++   +
Sbjct: 551 WSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHIT---ILGVLFACS----HAGLVNEGW 603

Query: 410 EKSFSVGT------------ALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAML 451
               S+               +L+   +   LD+  K + E+  E D+V W  +L
Sbjct: 604 YYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLL 658



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 164/337 (48%), Gaps = 8/337 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD+ P+RN V +  ++  Y    L+  A+ L   + R G+     T SSVL+ C  L
Sbjct: 340 QVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERL 399

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           +D    +Q+H   +K G   DV V ++L+D+Y +   + +  +VF +M   + V W S++
Sbjct: 400 YDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSII 456

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + +A++   D  L L+  M+  G   +  T ++VL       ++    Q H  V+K   +
Sbjct: 457 AAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQD 516

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           ++ +  NAL+ MY K   + DA+ +F+ M  +D I+W++M+AG   N   MEA   F +M
Sbjct: 517 LILN--NALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESM 574

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN--GIDFDHNIRTGLMVAYSKCG 329
            + G +    T + V+  C+    +      + + + N  GID        ++    +  
Sbjct: 575 KVQGPKPNHITILGVLFACSHAGLVNEG-WYYFRSMNNLYGIDPGREHYGCMLDLLGRAE 633

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           K++D  K+   M    DVV+W  ++        +DLA
Sbjct: 634 KLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLA 670



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
           D   A+ +   +   GV  +  T+S +I  C A   AV +GK+ H        +    ++
Sbjct: 265 DLPSAMHVLDSMERRGVWADSITYSELIKCCLA-HGAVREGKRVHRHIFSNGYHPKTFLT 323

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           + L+ MY K   +E A  +F +  +R++VSW +MI  Y+      +A+ +   M R  + 
Sbjct: 324 NILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVM 383

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVN--EHHIYPTMEHYSCMVDLYSRAGMLEKA 636
            +  TF  V+ AC    L D  Q +  IM    E  ++      S ++D+YS+ G L +A
Sbjct: 384 PNMFTFSSVLRACER--LYDLKQLHSWIMKVGLESDVFVR----SALIDVYSKMGELLEA 437

Query: 637 MDIINRMPFAASATVWRTVLAA 658
           + +   M     + VW +++AA
Sbjct: 438 LKVFREM-MTGDSVVWNSIIAA 458


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/558 (39%), Positives = 348/558 (62%), Gaps = 21/558 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T   + + I  CA +K L  AR++H+ +  +    D  +   L+  Y KCG + +A K+F
Sbjct: 50  TPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVF 109

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             MR  KD+VSWT++I+G+ QN     A+     M +   +PNGFT++ +L A  A +  
Sbjct: 110 DKMRN-KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADS 168

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HA  +K ++ +   VG+ALL+ Y + G +D A  VF+ +D K+ V+W+A+++G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           A+ GD E A+ ++ ++   G +   FT+SS+ +A  A   A+EQGK  HA  IK++    
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSAL-AGIGALEQGKWVHAHMIKSRQKLT 287

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V + ++ MY+K G++  A +VF+R   +DLV+WNSM+  +AQ+G  K+A+  F+EMR+
Sbjct: 288 AFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  + I+F+ ++TAC+H GLV EG+ YFD M+ E+++ P +EHY  +VDL  RAG+L 
Sbjct: 348 SGIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLN 406

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
            A+  I +MP   +A VW  +LAACR+                L P DS   VLL N+YA
Sbjct: 407 YALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYA 466

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +TGHW   ARVRK+M    VKKE   SW+E++N  + F+A D +HP++ +IY   +E+S 
Sbjct: 467 STGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISM 526

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           +++  GY PD  YVL  +D++ +EA L  HSE++A+AF L+  PAGA ++I+KN+R+CGD
Sbjct: 527 KIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGD 586

Query: 801 CHTVIKLISKLERRDIVV 818
           CH+  K ISK+  R+IV+
Sbjct: 587 CHSAFKYISKVFEREIVI 604



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 178/365 (48%), Gaps = 12/365 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            R++H     S FA D  +  SL+ LY +  +V +  +VFD M   ++VSWTSL++GYA+
Sbjct: 70  ARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQ 129

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVV 213
           N M    + L   M     KPN FTF+++L   G  AD GI     Q+H + +K      
Sbjct: 130 NDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGI---GGQIHALAVKCDWHED 186

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +AL+ MY +   +  A AVFD ++ ++ ++WN++++G+        A   F  M  
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQR 246

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E T  T+ S+    A    L   + +H+ ++K+       +   ++  Y+K G M D
Sbjct: 247 NGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMID 306

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K+F  +   KD+V+W +M++   Q G    AV+ F +M + G+  N  ++  ILTA  
Sbjct: 307 ARKVFERVLN-KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACS 365

Query: 394 AVSPFQVHAH----IIKTNYEKSFSVGTALLNAYVKKGILDEA-AKVFELIDEKDIVAWS 448
                +   H    I + N E        +++   + G+L+ A   +F++  E     W 
Sbjct: 366 HGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWG 425

Query: 449 AMLAG 453
           A+LA 
Sbjct: 426 ALLAA 430



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 189/413 (45%), Gaps = 42/413 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
             +FD+   ++ V +  L+  Y ++ +  EA+ L  G+ +      G T +S+LK  G  
Sbjct: 106 HKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAY 165

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G Q+H   VK  +  DV V ++L+D+Y R   ++    VFD ++  N VSW +L+
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG+AR    +  L +F  MQ  G +   FT+S++   LA  G +     VH  +IK+  +
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQK 285

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V N ++ MY KS  + DAR VF+ + ++D +TWNSM+  +    L  EA   F  M
Sbjct: 286 LTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEM 345

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
             +G  L + +F+ ++  C+           H  ++K G  +                  
Sbjct: 346 RKSGIYLNQISFLCILTACS-----------HGGLVKEGKHY------------------ 376

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            D  K +++  E++  V+   ++    + G ++ A+ F  +M  E   P    +  +L A
Sbjct: 377 FDMIKEYNLEPEIEHYVTVVDLLG---RAGLLNYALVFIFKMPME---PTAAVWGALLAA 430

Query: 392 -----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
                   V  F    H+ + + + S      L N Y   G  D AA+V +++
Sbjct: 431 CRMHKNAKVGQFAAD-HVFQLDPDDS-GPPVLLYNIYASTGHWDAAARVRKMM 481


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 371/655 (56%), Gaps = 21/655 (3%)

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTF 182
           ++T ++ + RR+FD M++ + +SWT+L+SGY     +   L LF  M+VE G++ + F  
Sbjct: 60  VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           S           V     +H   +K G      V +AL+ MY K+  + + R VF  M  
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           R+ ++W +++ G V    + EA   F+ M  +  E    TF   +K CA +  L   R++
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H+Q +K G D    +   L   Y+KCGK+E    +F  M  M+DVVSWT +I+  +Q G 
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKM-SMRDVVSWTTIITTLVQMGQ 298

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
            + AV  F +M    V PN +T++ +++    ++      Q+HA I+      S SV  +
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENS 358

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           ++  Y K G L  ++ +F  +  +DIV+WS ++AGY+Q G    A ++   +  EG KP 
Sbjct: 359 IMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPT 418

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           EF  +SV++AC    A +E GKQ HA  +   L +   V SAL+ MY K G+IE AS +F
Sbjct: 419 EFALASVLSAC-GNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIF 477

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
                 D+VSW +MI GYA+HG++++ +++F+++ R  L  D +TFIGV++AC+HAGLVD
Sbjct: 478 DAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVD 537

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G +YF+ M  ++ I P+ EHY CM+DL  RAG L  A  +I  MPF     VW T+L A
Sbjct: 538 LGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597

Query: 659 C--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           C              R++ L+P+ +  ++ L+N+YA+ G W+E A +RKLM  + V KE 
Sbjct: 598 CRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEP 657

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           G+SWI+VK+  ++F+AGD SHPQ   IY+ L+ L++R + A    +T ++  D++
Sbjct: 658 GWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYDLE 712



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 281/559 (50%), Gaps = 7/559 (1%)

Query: 13  PQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-R 71
           P++ +  K L    +    + +FD+  Q++ + +  L+  Y   +   EAL LF  +R  
Sbjct: 50  PESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVE 109

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
            GL +    LS   K CG   D  +G  +H   VK+G    V V ++L+D+Y +   + +
Sbjct: 110 SGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFE 169

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
           GRRVF +M   NVVSWT++++G  R   N   L  F  M    ++ +S+TF+  L   AD
Sbjct: 170 GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACAD 229

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
            G +    ++H   +K G +V + V N L +MY K   +     +F+ M  RD ++W ++
Sbjct: 230 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 289

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +   V       A + F  M  +       TF +VI  CA    +    QLH+ +L  G+
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGL 349

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
               ++   +M  Y+KCG++  +S IF  M   +D+VSW+ +I+G+ Q G +  A     
Sbjct: 350 AASLSVENSIMTMYAKCGQLTSSSVIFHEMTR-RDIVSWSTIIAGYSQGGHVSEAFELLS 408

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
            M  EG +P  F  + +L+A   ++      Q+HA+++    E +  V +AL+N Y K G
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCG 468

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            ++EA+++F+  +  DIV+W+AM+ GYA+ G +   + ++ ++   G++P+  TF  V++
Sbjct: 469 SIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLS 528

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDL 546
           AC+         + F+A S K +++ +      ++ +  + G +  A  + +     RD 
Sbjct: 529 ACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDD 588

Query: 547 VSWNSMICGYAQHGHTKKA 565
           V W++++     HG  ++ 
Sbjct: 589 VVWSTLLRACRVHGDVERG 607


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 273/833 (32%), Positives = 446/833 (53%), Gaps = 50/833 (6%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P  N   +  L+  Y ++   +E L LF  ++  G        S+VL  C     
Sbjct: 83  VFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGA 142

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ +H   V +G    V V  ++V+LY +   V + + VF+ + E N+VSW +L++ 
Sbjct: 143 LNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAA 201

Query: 154 YARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            A+N      +++FH M ++G ++PN  TF +V+   ++   +      H  +I+ G + 
Sbjct: 202 NAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDS 261

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V N+L++MY K   V  AR VF+ M  R+ ++W  M+  Y        AF+ +  M 
Sbjct: 262 YLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMD 321

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               E    TF++V+  C   ++L  A Q+H+ ++ +G D D  ++  L+  Y KCG ++
Sbjct: 322 ---CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVD 378

Query: 333 DASKIFSMMREM-KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            A  IF  ++E   + V+W AMISG  Q+G    A+  F +M  EGVRPN  TY   L A
Sbjct: 379 SAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEA 438

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +++      Q+HA I+  N  ++ ++  A++N Y K G LDEA   F  + E+D+V+W
Sbjct: 439 CSSLNDLTRGRQLHARILLENIHEA-NLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSW 497

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC-TAPSAAVEQGKQFHACS 506
           + M+A YAQ G    A++ ++Q+  EG   +  T+   I+AC + PS A+  GK  H+  
Sbjct: 498 NTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLAL--GKTIHSIV 555

Query: 507 IKAK--LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             A   L     V++ALVTMY++ G++  A  VF R   R+LV+W+++I   AQHG   +
Sbjct: 556 ATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENE 615

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           AL++F+EM+ Q  + D +TF  ++ AC+  G+V +G  YF  MV ++ I  + +H+  MV
Sbjct: 616 ALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMV 675

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSA 670
           DL  RAG LE+A  ++ + P A +  V   +L AC +              + L   +SA
Sbjct: 676 DLLGRAGWLEEAEQVMRKNPCALAHAV---LLGACHVHGDVERGIRIAQSALELDWKNSA 732

Query: 671 IY----VLLSNMYAATGHWQERARVRKLMNDRKVKKE-AGYSWIEVKNKTYSFLAGD--I 723
            +     +L+ +Y A G W++ ARVRK +  R  ++E  G SWIEVKN+ + F   D  +
Sbjct: 733 SFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWIEVKNRVHEFGEDDDRL 792

Query: 724 SHPQSNQIYSKLEELST-RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
             P+ ++I  +L+ LS+  +++ G   D        ++     +   HSE++AI FG+V+
Sbjct: 793 QGPRLDKIRGELQRLSSLAVEEGGICKD--------ENARAHILGCCHSEKVAIGFGIVS 844

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK-EGLCSC 834
           TPAG  ++IVKNLR C DCH   K +S+  +R+I VRD    H F+  G CSC
Sbjct: 845 TPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISVRDPYGLHCFQTNGSCSC 897



 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 180/589 (30%), Positives = 318/589 (53%), Gaps = 22/589 (3%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +S+L+ C        G+ VH   + SG   +  +   L+ +Y +   +ED   VF+ +  
Sbjct: 30  ASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLPN 89

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            NV SWT+L++ YA+      VL LF +MQ++G KP++F FSTVL   +  G +     +
Sbjct: 90  PNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAI 149

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +  G E    V NA++++Y K   V +A+AVF+ + +R+ ++WN+++A    N   
Sbjct: 150 HDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHC 208

Query: 262 MEAFETFNNMGLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
            +A + F+ M L G+     +TFVSV+  C+   +L   +  H ++++ G D    +   
Sbjct: 209 KDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNS 268

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y KCG ++ A  +F  M   ++VVSWT MI  + Q G I  A + + +M  E   P
Sbjct: 269 LVNMYGKCGSVDRARLVFEKMSS-RNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---P 324

Query: 381 NGFTYSIILTA--QPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N  T+  ++ +  +P   P   Q+HAH++ + ++    +   L+  Y K G +D A  +F
Sbjct: 325 NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIF 384

Query: 437 ELIDEK--DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           E + E+  + V W+AM++G AQ G+++ A++ + ++  EGV+PN  T+ + + AC++ + 
Sbjct: 385 ENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLN- 443

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            + +G+Q HA  +   ++ A  +S+A++ MY K G+++ A + F +  +RD+VSWN+MI 
Sbjct: 444 DLTRGRQLHARILLENIHEAN-LSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIA 502

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            YAQHG  ++ALE FK+M  +    D  T++G I AC     +  G+    I+       
Sbjct: 503 TYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATA---A 559

Query: 615 PTMEH----YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           P +E      + +V +Y+R G L  A  +  R   + +   W  ++AAC
Sbjct: 560 PCLEQDPGVATALVTMYARCGSLHDAKSVFWR-SHSRNLVTWSNLIAAC 607



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 252/470 (53%), Gaps = 18/470 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCGC 90
           +++F+R P+RN V +N L+    ++   ++A+ +F  +   G +    +T  SV+  C  
Sbjct: 181 KAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSN 240

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G+  H   +++GF   + V  SLV++Y +  +V+  R VF+ M+  NVVSWT +
Sbjct: 241 LLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVM 300

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG- 209
           +  YA+        +L+ RM  E   PN+ TF  V+        +  A Q+H  ++ +G 
Sbjct: 301 IWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGF 357

Query: 210 -GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR--DSITWNSMVAGYVTNELHMEAFE 266
             + V  VC  L++MY K   V  A ++F+ +++R  +++TWN+M++G   +    +A E
Sbjct: 358 DSDAVLQVC--LVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALE 415

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M L G      T+++ ++ C++  +L   RQLH+++L   I  + N+   ++  Y 
Sbjct: 416 CFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENI-HEANLSNAVINMYG 474

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG +++A   F+ M E +DVVSW  MI+ + Q+G+   A+ FF QM  EG   +  TY 
Sbjct: 475 KCGSLDEAMDEFAKMPE-RDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYL 533

Query: 387 IILTA---QPAVSPFQVHAHIIKTN---YEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
             + A    P+++  +    I+ T     E+   V TAL+  Y + G L +A  VF    
Sbjct: 534 GAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSH 593

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            +++V WS ++A  AQ G    A+ ++R++  +G KP+  TFS+++ AC+
Sbjct: 594 SRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACS 643



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 261/511 (51%), Gaps = 21/511 (4%)

Query: 159 MNDRVLELFHRMQVEGIKPNSFT-----FSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           MN    EL  +  +  +K +S +     ++++L    ++   A    VH  ++ +G  V 
Sbjct: 1   MNPAATELSLQTHINQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVN 60

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + N LI MY K   + DA  VF+ + + +  +W +++  Y       E    F  M L
Sbjct: 61  RYIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQL 120

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +     F +V+  C++   L   + +H   +  G++    +   ++  Y KCG++ +
Sbjct: 121 DGTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGME-TQVVGNAIVNLYGKCGRVHE 179

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQ 392
           A  +F  + E +++VSW A+I+ + QNG    A+  F  M  +G VRPN  T+  ++ A 
Sbjct: 180 AKAVFERLPE-RNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDAC 238

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +         H  II+T ++    VG +L+N Y K G +D A  VFE +  +++V+W+
Sbjct: 239 SNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWT 298

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            M+  YAQ G    A  +Y+++  E   PN  TF +V+++C  P   + + +Q HA  + 
Sbjct: 299 VMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPE-DLPRAEQIHAHMVA 354

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFK--RQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +  ++   +   LVTMY K G+++SA  +F+  ++R  + V+WN+MI G AQHG +K+AL
Sbjct: 355 SGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQAL 414

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           E F +M  + +  + +T++  + AC+    +  G+Q    ++ E+     + +   ++++
Sbjct: 415 ECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEANLSN--AVINM 472

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           Y + G L++AMD   +MP       W T++A
Sbjct: 473 YGKCGSLDEAMDEFAKMP-ERDVVSWNTMIA 502


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/819 (32%), Positives = 430/819 (52%), Gaps = 60/819 (7%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDG 132
           PL    L    K+   L   +  R +H   ++          V+ +L+  Y R  ++   
Sbjct: 56  PLDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAA 115

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV---L 189
             +F+ M   + V++ SL++     +     L+    M +EG   +SFT  +VL     L
Sbjct: 116 LALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHL 175

Query: 190 ADEGIVATAVQVHTMVIKNG---GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS- 245
           A++  +    + H   +KNG   G+   +  NAL+SMY +  +V DA+ +F  ++  DS 
Sbjct: 176 AED--LRLGREAHAFALKNGFLDGDERFAF-NALLSMYARLGLVDDAQMLFGSVDTTDSP 232

Query: 246 ----ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
               +TWN+MV+  V +    EA E   +M   G      TF S +  C+  + L L R+
Sbjct: 233 GGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGRE 292

Query: 302 LHSQVLKNGIDFDHN--IRTGLMVAYSKCGKMEDASKIFSMMRE-MKDVVSWTAMISGHL 358
           +H+ VLK+  D   N  + + L+  Y+   ++  A ++F M+    + +  W AM+ G+ 
Sbjct: 293 MHAYVLKDS-DLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYA 351

Query: 359 QNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSF 413
           Q G  + A+  F +M  E GV P+  T + +L A      F     VH +++K     + 
Sbjct: 352 QAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNP 411

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
            V  AL++ Y + G ++ A  +F  I+ +D+V+W+ ++ G    G    A ++ R++  +
Sbjct: 412 FVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ 471

Query: 474 G------------------VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           G                  V PN  T  +++  C A  AA  +GK+ H  +++  L++ +
Sbjct: 472 GRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGC-AMLAAPAKGKEIHGYAMRHALDSDI 530

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM-RR 574
            V SALV MY+K G +  +  VF R  KR++++WN +I  Y  HG   +A+ +F  M   
Sbjct: 531 AVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMS 590

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
            + + + +TFI  + AC+H+G+VD G + F  M   H + PT + ++C VD+  RAG L+
Sbjct: 591 NEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLD 650

Query: 635 KAMDIINRM-PFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMY 679
           +A  II  M P     + W + L ACRL                L+P +++ YVLL N+Y
Sbjct: 651 EAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIY 710

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           +A G W++ + VR  M  R V KE G SWIE+    + F+AG+ +HP+S  +++ ++ L 
Sbjct: 711 SAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALW 770

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            R+++ GY PDTS VL DI++  K AIL  HSE+LAIAFGL+ TP GA +++ KNLRVC 
Sbjct: 771 ERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCN 830

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH   K IS++  R+IV+RD  RFHHF +G CSCGDYW
Sbjct: 831 DCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/641 (35%), Positives = 369/641 (57%), Gaps = 23/641 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+LI++Y+K +    AR +FD M +R+ ++W +M+ GY  +    E  + F +M  +G E
Sbjct: 73  NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSG-E 131

Query: 278 LTRSTFVS--VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
              + FV+  V K C+ +  +   +Q H   LK G+     +R  L+  YS C    +A 
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI 191

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SIILTA 391
           ++   +    D+  +++ +SG+L+ GA    ++   +   E    N  TY     +    
Sbjct: 192 RVLDDL-PYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +      QVH+ +++  +        AL+N Y K G +  A +VF+    ++I   + ++
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
             Y Q    E A+ ++ ++ ++ V PNE+TF+ ++N+  A  + ++QG   H   +K+  
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNS-IAELSLLKQGDLLHGLVLKSGY 369

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            N + V +ALV MY+K G+IE A + F     RD+V+WN+MI G + HG  ++ALE F  
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDR 429

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M       + ITFIGV+ AC+H G V++G  YF+ ++ +  + P ++HY+C+V L S+AG
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
           M + A D +   P       WRT+L AC +              I   P+DS +YVLLSN
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSN 549

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           ++A +  W+  A+VR LMN+R VKKE G SWI ++N+T+ FLA D  HP+   IY+K++E
Sbjct: 550 IHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKE 609

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           + +++K  GY PD +    D+D+E +E  LS HSE+LA+A+GL+ TP  +PL + KN+R+
Sbjct: 610 VMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRI 669

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH+ IKLISK+ +R IV+RD+NRFHHF +G CSC DYW
Sbjct: 670 CDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 234/489 (47%), Gaps = 12/489 (2%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECV---KSGFARDVNVSTSLVDLYMRTNNVED 131
           P     L+ +LK C        G  +H   +   +S  A D     SL++LY++      
Sbjct: 28  PFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR 87

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLA 190
            R++FD M E NVVSW +++ GY  +  +  VL+LF  M   G  +PN F  + V    +
Sbjct: 88  ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
           + G +    Q H   +K G      V N L+ MY       +A  V D +   D   ++S
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
            ++GY+      E  +               T++S ++L +  ++L LA Q+HS++++ G
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG 267

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
            + +      L+  Y KCGK+  A ++F      +++   T ++  + Q+ + + A+N F
Sbjct: 268 FNAEVEACGALINMYGKCGKVLYAQRVFDDT-HAQNIFLNTTIMDAYFQDKSFEEALNLF 326

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M  + V PN +T++I+L +   +S  +    +H  ++K+ Y     VG AL+N Y K 
Sbjct: 327 SKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G +++A K F  +  +DIV W+ M++G +  G    A++ + ++   G  PN  TF  V+
Sbjct: 387 GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVL 446

Query: 487 NACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KR 544
            AC+     VEQG   F+    K  +   +   + +V + SK G  + A +  +    + 
Sbjct: 447 QACSHI-GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW 505

Query: 545 DLVSWNSMI 553
           D+V+W +++
Sbjct: 506 DVVAWRTLL 514



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 16/319 (5%)

Query: 53  YCRDSLHQEALNLFL--GIRRLGLPLFGSTLS-----------SVLKTCGCLFDHVFGRQ 99
           YC  S+   AL+ +L  G  + GL +   T +           S L+    L D     Q
Sbjct: 199 YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQ 258

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           VH   V+ GF  +V    +L+++Y +   V   +RVFDD +  N+   T+++  Y ++K 
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKS 318

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
            +  L LF +M  + + PN +TF+ +L  +A+  ++     +H +V+K+G      V NA
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L++MY KS  + DAR  F GM  RD +TWN+M++G   + L  EA E F+ M   G    
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKCGKMEDASKI 337
           R TF+ V++ C+    +       +Q++K   D   +I+  T ++   SK G  +DA   
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAGMFKDAEDF 497

Query: 338 FSMMREMKDVVSWTAMISG 356
                   DVV+W  +++ 
Sbjct: 498 MRTAPIEWDVVAWRTLLNA 516



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 186/430 (43%), Gaps = 10/430 (2%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVL-KTC 88
           + + LFD  P+RN V +  ++  Y       E L LF  +   G       +++V+ K+C
Sbjct: 87  RARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSC 146

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   G+Q H   +K G      V  +LV +Y   +   +  RV DD+   ++  ++
Sbjct: 147 SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S LSGY         L++  +   E    N+ T+ + L + ++   +  A+QVH+ +++ 
Sbjct: 207 SALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRF 266

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G       C ALI+MY K   V  A+ VFD    ++     +++  Y  ++   EA   F
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLF 326

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + M          TF  ++   A    L+    LH  VLK+G      +   L+  Y+K 
Sbjct: 327 SKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +EDA K FS M   +D+V+W  MISG   +G    A+  F +M   G  PN  T+  +
Sbjct: 387 GSIEDARKAFSGM-TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-------E 441
           L A   +   +   H       K F V   + +     G+L +A    +  D       E
Sbjct: 446 LQACSHIGFVEQGLHYF-NQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504

Query: 442 KDIVAWSAML 451
            D+VAW  +L
Sbjct: 505 WDVVAWRTLL 514


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/691 (35%), Positives = 378/691 (54%), Gaps = 55/691 (7%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVT 257
           Q+H+  I  G      V   +I+   K ++  +  AR VFD M   +   WN+M+ GY  
Sbjct: 37  QIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSR 96

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                 A   +  M   G      T+  ++K       ++  R+LH  ++K G   +  +
Sbjct: 97  VGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFV 156

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMK-DVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +  L+  YS  G++  A  +F   R  K DVV+W  MISG+ ++   D ++  F +M R 
Sbjct: 157 QNALIHLYSLSGEVSVARGVFD--RSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERM 214

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
            V P+  T   +L+A   +       +VH ++     E    +  AL++ Y   G +D A
Sbjct: 215 RVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTA 274

Query: 433 AKVFE-------------------------------LIDEKDIVAWSAMLAGYAQIGDTE 461
             +F+                                + E+D V+W+AM+ GY Q+   +
Sbjct: 275 LGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK 334

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
             + ++R++ +  +KP+EFT  S++ AC A   A+E G+   A   K ++     V +AL
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTAC-AHLGALELGEWIKAYIDKNEIKIDSFVGNAL 393

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + MY   GN+E A  +F     RD +SW ++I G A +G+ ++AL++F +M +  +  D 
Sbjct: 394 IDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDE 453

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +T IGV+ ACTH+G+VD+G+++F  M  +H I P + HY CMVDL  RAG L++A ++I 
Sbjct: 454 VTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIK 513

Query: 642 RMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQE 687
            MP   ++ VW ++L ACR              ++ L+P + A+YVLL N+YAA   W++
Sbjct: 514 NMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEK 573

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
              VRKLM DR +KK  G S IE+    + F+AGD  HPQS +IYSKL+E+S  LK AGY
Sbjct: 574 LHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGY 633

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            PDTS V  DI +E KE+ + +HSE+LAIAFGL+++  G  ++IVKNLR+C DCH V KL
Sbjct: 634 SPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKL 693

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +SK+  R+++VRD  RFHHF+ G CSC DYW
Sbjct: 694 VSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/510 (26%), Positives = 243/510 (47%), Gaps = 44/510 (8%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR--TNNVEDGRRVFDDMN 140
           S++KTC  +      +Q+H + + +G   +  V   ++    +    ++E  R VFD M 
Sbjct: 24  SLIKTCKSMAQL---KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             N   W +++ GY+R    +  + ++  M   G+ P+ +T+  +L     +  V    +
Sbjct: 81  GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  ++K G      V NALI +Y  S  V  AR VFD     D +TWN M++GY  ++ 
Sbjct: 141 LHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQ 200

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             E+ + F+ M       +  T VSV+  C+  K+L + +++H  V    I+    +   
Sbjct: 201 FDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENA 260

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT------ 374
           L+  Y+ CG M+ A  IF  M+  +DV+SWTA+++G    G + LA N+F +M       
Sbjct: 261 LIDMYAACGDMDTALGIFDNMKS-RDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVS 319

Query: 375 ---------------------RE----GVRPNGFTYSIILTAQPAVSPFQ----VHAHII 405
                                RE     ++P+ FT   ILTA   +   +    + A+I 
Sbjct: 320 WTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYID 379

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K   +    VG AL++ Y   G +++A ++F  +  +D ++W+A++ G A  G  E A+ 
Sbjct: 380 KNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALD 439

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA-CSIKAKLNNALCVSSALVTM 524
           ++ Q+    + P+E T   V+ ACT  S  V++GK+F A  + +  +   +     +V +
Sbjct: 440 MFSQMLKASITPDEVTCIGVLCACTH-SGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDL 498

Query: 525 YSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
             + G+++ A EV K    K + + W S++
Sbjct: 499 LGRAGHLKEAHEVIKNMPVKPNSIVWGSLL 528



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 207/498 (41%), Gaps = 87/498 (17%)

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV-------- 95
           +EY R++F+      H    N+  G  R+G P    ++   +   G + D          
Sbjct: 69  MEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKR 128

Query: 96  --------FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
                    GR++H   VK GF+ +V V  +L+ LY  +  V   R VFD  ++ +VV+W
Sbjct: 129 FTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTW 188

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
             ++SGY R+K  D  ++LF  M+   + P+S T  +VL   +    +    +VH  V  
Sbjct: 189 NVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKD 248

Query: 208 NGGEVVTSVCNALISMY---------------LKSK----------------MVRDARAV 236
              E V  + NALI MY               +KS+                 V  AR  
Sbjct: 249 LKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNY 308

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD M +RD ++W +M+ GY+      E    F  M  A  +    T VS++  CA    L
Sbjct: 309 FDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGAL 368

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            L   + + + KN I  D  +   L+  Y  CG +E A +IF+ M   +D +SWTA+I G
Sbjct: 369 ELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPH-RDKISWTAVIFG 427

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG 416
              NG  + A++ F QM +  + P+  T                                
Sbjct: 428 LAINGYGEEALDMFSQMLKASITPDEVT-------------------------------C 456

Query: 417 TALLNAYVKKGILDEAAKVFELID-----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
             +L A    G++D+  K F  +      E ++  +  M+    + G  + A ++ + + 
Sbjct: 457 IGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMP 516

Query: 472 SEGVKPNEFTFSSVINAC 489
              VKPN   + S++ AC
Sbjct: 517 ---VKPNSIVWGSLLGAC 531



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 209/502 (41%), Gaps = 83/502 (16%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDRS + + V +N ++  Y R     E++ LF  + R+ +     TL SVL  C  L
Sbjct: 174 RGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKL 233

Query: 92  FDHVFGRQVHCECVKSGFARDVNV-STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            D   G++VH   VK      V V   +L+D+Y    +++    +FD+M   +V+SWT++
Sbjct: 234 KDLNVGKRVH-RYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAI 292

Query: 151 LSGY--------ARN---KMNDR--------------------VLELFHRMQVEGIKPNS 179
           ++G+        ARN   KM +R                    VL LF  MQ   IKP+ 
Sbjct: 293 VTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDE 352

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           FT  ++L   A  G +     +   + KN  ++ + V NALI MY     V  A  +F+ 
Sbjct: 353 FTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNA 412

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  RD I+W +++ G   N    EA + F+ M    A +T      +  LCA T      
Sbjct: 413 MPHRDKISWTAVIFGLAINGYGEEALDMFSQM--LKASITPDEVTCIGVLCACT------ 464

Query: 300 RQLHSQVLKNGIDF------DHNIRT-----GLMV-AYSKCGKMEDASKIFSMMREMKDV 347
              HS ++  G  F       H I       G MV    + G +++A ++   M    + 
Sbjct: 465 ---HSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNS 521

Query: 348 VSWTAMISG---HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
           + W +++     H      ++A     ++  E    NG  Y ++     A + +    +V
Sbjct: 522 IVWGSLLGACRVHRDEEMAEMAAQQILELEPE----NGAVYVLLCNIYAACNRWEKLHEV 577

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGIL-----DEAAKVFELIDEKDIVAWSAMLAGYA 455
              ++    +K+       +N  V + +       ++ +++  +DE  +       AGY+
Sbjct: 578 RKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSV---DLKFAGYS 634

Query: 456 --------QIGDTEGAVKIYRQ 469
                    IG+ E    +YR 
Sbjct: 635 PDTSEVFLDIGEEEKESAVYRH 656



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 134/266 (50%), Gaps = 4/266 (1%)

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKK--GILDEAAKVFE 437
           P     S+I T +      Q+H+  I T    +  V   ++    K   G ++ A  VF+
Sbjct: 18  PQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFD 77

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            +   +   W+ M+ GY+++G    AV +Y ++   GV P+E+T+  ++   T    AV+
Sbjct: 78  TMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTR-DTAVK 136

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G++ H   +K   ++ + V +AL+ +YS  G +  A  VF R  K D+V+WN MI GY 
Sbjct: 137 CGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYN 196

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           +     +++++F EM R  +    IT + V++AC+    ++ G++     V +  I P  
Sbjct: 197 RSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR-YVKDLKIEPVR 255

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRM 643
              + ++D+Y+  G ++ A+ I + M
Sbjct: 256 VLENALIDMYAACGDMDTALGIFDNM 281


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/581 (39%), Positives = 347/581 (59%), Gaps = 31/581 (5%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA------YSKCGKMEDAS 335
           +   ++KLC         R +H  V  +G    H+   GL V+      Y+K G ++DA 
Sbjct: 66  SLTRLVKLCVRHGTADHGRLIHRHVEAHG-PLPHDGAGGLFVSNSLASMYAKFGLLDDAL 124

Query: 336 KIFSMMREMKDVVSWTAMISGHLQ-NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
           ++F  M  +++VV+WT +++     +G    A+ F   M R+GV PN +T+S +L A   
Sbjct: 125 RMFDGM-PVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA--C 181

Query: 395 VSP---FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
            +P     VHA  +K   +    V ++L++AYVK G LD   +VF+ +  +D+V W++++
Sbjct: 182 TTPGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSII 241

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           AG+AQ GD  GA++++ ++   G   N+ T +SV+ ACT     +E G+Q HA  +K   
Sbjct: 242 AGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTG-MVMLEAGRQVHAHVLK--Y 298

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +  L + +AL+ MY K G++E A  +F R  +RD++SW++M+ G AQ+G + +AL VF  
Sbjct: 299 DRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDL 358

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M+ Q +  + +T +GV+ AC+HAGLV++G  YF  M     I P  EH++CMVDL  RAG
Sbjct: 359 MKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAG 418

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
            L++A++ I+ M     + +WRT+L ACR+              + L+P D    VLLSN
Sbjct: 419 KLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSN 478

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
            YA    W +  +  K M DR ++KE G SWIE++ + + F+AGD+SHP S+ I  +L  
Sbjct: 479 TYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNR 538

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L  R+K  GY P T +VLQD+  E KE +L  HSE++AI FG +    G P++I+KNLR+
Sbjct: 539 LIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKNLRI 598

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCH   KL+SK E R IV+RD  RFHHF++G CSCGDYW
Sbjct: 599 CGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 171/346 (49%), Gaps = 15/346 (4%)

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR-NKMNDRVLELFHRMQVE 173
           VS SL  +Y +   ++D  R+FD M   NVV+WT++++  A  +      L     M+ +
Sbjct: 106 VSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRD 165

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G+ PN++TFS+VLG     G++     VH   +K G +    V ++LI  Y+K   +   
Sbjct: 166 GVAPNAYTFSSVLGACTTPGMLTA---VHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGG 222

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R VFD M  RD + WNS++AG+  +   + A E F  M  AG    + T  SV++ C   
Sbjct: 223 RRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGM 282

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L   RQ+H+ VLK   D D  +   L+  Y KCG +EDA  +F  M + +DV+SW+ M
Sbjct: 283 VMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQ-RDVISWSTM 339

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF 413
           +SG  QNG    A+  F  M  +GV PN  T   +L A       +   H  ++  ++ F
Sbjct: 340 VSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRS-MKRLF 398

Query: 414 SVG------TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLA 452
            +         +++   + G LDEA +    +  E D V W  +L 
Sbjct: 399 GIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLG 444



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 196/395 (49%), Gaps = 24/395 (6%)

Query: 190 ADEG-IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
           AD G ++   V+ H  +  +G   +  V N+L SMY K  ++ DA  +FDGM  R+ +TW
Sbjct: 80  ADHGRLIHRHVEAHGPLPHDGAGGLF-VSNSLASMYAKFGLLDDALRMFDGMPVRNVVTW 138

Query: 249 NSMVAGYVTNE-LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
            ++VA   + +    EA      M   G      TF SV+  C T   L     +H+  +
Sbjct: 139 TTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGML---TAVHASTV 195

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           K G+D D  +R+ L+ AY K G ++   ++F  M   +D+V W ++I+G  Q+G    A+
Sbjct: 196 KAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEM-VTRDLVVWNSIIAGFAQSGDGVGAI 254

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAY 423
             F +M   G   N  T + +L A   +    +  QVHAH++K  Y++   +  ALL+ Y
Sbjct: 255 ELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMY 312

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K G L++A  +F  + ++D+++WS M++G AQ G +  A++++  + S+GV PN  T  
Sbjct: 313 CKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMV 372

Query: 484 SVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASE-V 537
            V+ AC+  +  VE G  +         I+ +  +  C    +V +  + G ++ A E +
Sbjct: 373 GVLFACSH-AGLVEDGWHYFRSMKRLFGIQPEREHHNC----MVDLLGRAGKLDEAVEFI 427

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
                + D V W +++     H +   A    +E+
Sbjct: 428 HGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREI 462



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 160/341 (46%), Gaps = 41/341 (12%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCR-DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---G 89
           +FD  P RN V +  ++      D   QEAL   + +RR G+     T SSVL  C   G
Sbjct: 126 MFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPG 185

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L        VH   VK+G   DV V +SL+D Y++  +++ GRRVFD+M   ++V W S
Sbjct: 186 ML------TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNS 239

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G+A++      +ELF RM+  G   N  T ++VL       ++    QVH  V+K  
Sbjct: 240 IIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLKYD 299

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            +++    NAL+ MY K   + DA A+F  M  RD I+W++MV+G   N   +EA   F+
Sbjct: 300 RDLILH--NALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFD 357

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF---------------D 314
            M   G      T V V+  C+           H+ ++++G  +                
Sbjct: 358 LMKSQGVAPNHVTMVGVLFACS-----------HAGLVEDGWHYFRSMKRLFGIQPEREH 406

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           HN    L+    + GK+++A +    M    D V W  ++ 
Sbjct: 407 HNCMVDLL---GRAGKLDEAVEFIHGMSLEPDSVIWRTLLG 444


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/655 (35%), Positives = 369/655 (56%), Gaps = 21/655 (3%)

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTF 182
           ++T ++ + RR+FD M++ + +SWT+L+SGY     +   L LF  M+VE G++ + F  
Sbjct: 60  VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           S           V     +H   +K G      V +AL+ MY K+  + + R VF  M  
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           R+ ++W +++ G V    + EA   F+ M  +  E    TF   +K CA +  L   R++
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H+Q +K G D    +   L   Y+KCGK+E    +F  M  M+DVVSWT +I+  +Q G 
Sbjct: 240 HAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKM-SMRDVVSWTTIITTLVQMGQ 298

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
            + AV  F +M    V PN +T++ +++    ++      Q+HA I+      S SV  +
Sbjct: 299 EECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENS 358

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           ++  Y K G L  ++ +F  +  +DIV+WS ++AGY Q G    A ++   +  EG KP 
Sbjct: 359 IMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPT 418

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           EF  +SV++AC    A +E GKQ HA  +   L +   V SAL+ MY K G+IE AS +F
Sbjct: 419 EFALASVLSAC-GNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIF 477

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
                 D+VSW +MI GYA+HG++++ +++F+++ R  L  D +TFIGV++AC+HAGLVD
Sbjct: 478 DAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVD 537

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G  YF+ M  ++ I P+ EHY CM+DL  RAG L  A  +I  MPF     VW T+L A
Sbjct: 538 LGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRA 597

Query: 659 C--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           C              R++ L+P+ +  ++ L+N+YA+ G W+E A +RKLM  + V KE 
Sbjct: 598 CRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEP 657

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           G+SWI+VK+  ++F+AGD SHPQ   IY+ L+ L++R + A    +T ++  D++
Sbjct: 658 GWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYDLE 712



 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 280/559 (50%), Gaps = 7/559 (1%)

Query: 13  PQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-R 71
           P++ +  K L    +    + +FD+  Q++ + +  L+  Y   +   EAL LF  +R  
Sbjct: 50  PESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVE 109

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
            GL +    LS   K CG   D  +G  +H   VK+G    V V ++L+D+Y +   + +
Sbjct: 110 SGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFE 169

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
           GRRVF +M   NVVSWT++++G  R   N   L  F  M    ++ +S+TF+  L   AD
Sbjct: 170 GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACAD 229

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
            G +    ++H   +K G +V + V N L +MY K   +     +F+ M  RD ++W ++
Sbjct: 230 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 289

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +   V       A + F  M  +       TF +VI  CA    +    QLH+ +L  G+
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGL 349

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
               ++   +M  Y+KCG++  +S IF  M   +D+VSW+ +I+G+ Q G +  A     
Sbjct: 350 AASLSVENSIMTMYAKCGQLTSSSVIFHEMTR-RDIVSWSTIIAGYXQGGHVSEAFELLS 408

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
            M  EG +P  F  + +L+A   ++      Q+HA+++    E +  V +AL+N Y K G
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCG 468

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            ++EA+++F+  +  DIV+W+AM+ GYA+ G +   + ++ ++   G++P+  TF  V++
Sbjct: 469 SIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLS 528

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDL 546
           AC+           F+A S K +++ +      ++ +  + G +  A  + +     RD 
Sbjct: 529 ACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDD 588

Query: 547 VSWNSMICGYAQHGHTKKA 565
           V W++++     HG  ++ 
Sbjct: 589 VVWSTLLRACRVHGDVERG 607


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/677 (35%), Positives = 390/677 (57%), Gaps = 24/677 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +++++    ++  + T   +HT ++K+G  + +   + LI  Y+K  ++ +AR +FD M 
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           +R  +TWNSM++ +V+     EA E ++NM   G      TF ++ K  +     R  ++
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 302 LHSQVLKNGIDF-DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            H   +  G +  D  + TG++  Y+K GKM+DA  +F  + + KDVV +TA+I G+ Q 
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLD-KDVVLFTALIVGYNQR 181

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVG 416
           G    A+  F  M    ++PN +T + +L +       V+   +H  ++K+  E   +  
Sbjct: 182 GLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQ 241

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           T+LL  Y K  +++++ KVF  +     V W++ + G  Q G  E A+ ++R++    + 
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSIS 301

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PN FTFSS+++AC++  A +E G+Q HA ++K  ++    V +AL+ +Y K GN+E A  
Sbjct: 302 PNHFTFSSILHACSSL-AMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARS 360

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF+   + D+VS N+MI  YAQ+G   +ALE+F+ M++   + + +TFI ++ AC +AGL
Sbjct: 361 VFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGL 420

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V+EG Q F ++ N H I  T +HY+CM+DL  RA   E+A  +I           WRT+L
Sbjct: 421 VEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLL 479

Query: 657 AAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            AC              +++   P D   ++LL+N+YA+ G W     ++    D ++KK
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKK 539

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
               SW+++  + ++F+AGD+SHP++++I   L EL  ++   GY PDT +VLQD+++E 
Sbjct: 540 TPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEK 599

Query: 763 KEAILSQHSERLAIAFGLVATPA-GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
           K + L  HSE+LAIAF L  T      ++I KNLRVCGDCH+ IK +S L  RDI+ RD 
Sbjct: 600 KISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDA 659

Query: 822 NRFHHFKEGLCSCGDYW 838
            RFHHFK G+CSC DYW
Sbjct: 660 KRFHHFKGGICSCKDYW 676



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 262/511 (51%), Gaps = 18/511 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H   +KSG          L+D Y++ + + + R++FD+M   ++V+W S++S +   
Sbjct: 21  KSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS-V 216
                 +EL+  M  EG+ P+++TFS +    ++ G+     + H + +  G EV    V
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
              ++ MY K   ++DAR VFD + D+D + + +++ GY    L  EA E F +M  +  
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    T  SV+  C    +L   + +H  V+K+G++     +T L+  YSKC  +ED+ K
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIK 259

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F+ +      V+WT+ I G +QNG  ++A++ F +M R  + PN FT+S IL A  +++
Sbjct: 260 VFNSLAYASH-VTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLA 318

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q+HA  +K   + +  V  AL++ Y K G +++A  VFE + E D+V+ + M+ 
Sbjct: 319 MLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIY 378

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SI 507
            YAQ G    A++++ ++   G KPN  TF S++ AC   +  VE+G Q  +      SI
Sbjct: 379 AYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACN-NAGLVEEGCQIFSLIRNNHSI 437

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +   ++  C    ++ +  +    E A+ + +  +  D++ W +++     HG  + A +
Sbjct: 438 ELTRDHYTC----MIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEK 493

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
             K+M  Q    DG T I +      AG  D
Sbjct: 494 FMKKMLDQAPR-DGGTHILLTNIYASAGKWD 523



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 214/449 (47%), Gaps = 7/449 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P R+ V +N ++  +      +EA+ L+  +   G+     T S++ K    +
Sbjct: 55  RKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEM 114

Query: 92  FDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G++ H   V  GF   D  V+T +VD+Y +   ++D R VFD + + +VV +T+L
Sbjct: 115 GVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTAL 174

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GY +  ++   LE+F  M    IKPN +T ++VL    + G +     +H +V+K+G 
Sbjct: 175 IVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGL 234

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E V +   +L++MY K  MV D+  VF+ +     +TW S + G V N     A   F  
Sbjct: 235 ESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFRE 294

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M          TF S++  C++   L    Q+H+  +K G+D +  +   L+  Y KCG 
Sbjct: 295 MIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGN 354

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A  +F  + E+ DVVS   MI  + QNG    A+  F +M + G +PN  T+  IL 
Sbjct: 355 VEKARSVFESLTEL-DVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILL 413

Query: 391 AQPAVSPFQVHAHI---IKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDEKDIV 445
           A       +    I   I+ N+    +    T +++   +    +EAA + E     D++
Sbjct: 414 ACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVI 473

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
            W  +L      G+ E A K  +++  + 
Sbjct: 474 QWRTLLNACKIHGEVEMAEKFMKKMLDQA 502



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 174/355 (49%), Gaps = 2/355 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FDR   ++ V +  L+  Y +  L  EAL +F  +    +     TL+SVL +C
Sbjct: 154 KDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSC 213

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L D V G+ +H   VKSG    V   TSL+ +Y + N VED  +VF+ +  ++ V+WT
Sbjct: 214 GNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWT 273

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S + G  +N   +  L +F  M    I PN FTFS++L   +   ++    Q+H + +K 
Sbjct: 274 SFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKL 333

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +    V  ALI +Y K   V  AR+VF+ + + D ++ N+M+  Y  N    EA E F
Sbjct: 334 GVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELF 393

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSK 327
             M   G +    TF+S++  C     +    Q+ S +  N  I+   +  T ++    +
Sbjct: 394 ERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGR 453

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             + E+A+ +    +   DV+ W  +++    +G +++A  F  +M  +  R  G
Sbjct: 454 AKRFEEAAMLIEEGKN-PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGG 507


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/651 (35%), Positives = 374/651 (57%), Gaps = 53/651 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VF  +++ + ++WN+M+ G+  +   + A   +  M   G      TF  + K CA 
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS------------- 339
           +K  +  +Q+H+Q+LK G+  D ++ T L+  Y++ G +EDA K+F              
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 340 ---------------MMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                          M  E+  KDVVSW AMISG+ + G    A+  F +M +  V+P+ 
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T + +L+            Q+H+ I    +  +  +  AL++ Y K G ++ A  +FE 
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD+++W+ ++ GYA I   + A+ +++++   G  PN+ T  S++ AC A   A++ 
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPAC-AHLGAIDI 329

Query: 499 GKQFHACSIKAKLNNALCVSS---ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           G+  H   I  KL   +  +S   +L+ MY+K GNIE+A++VF     + L S N+MI G
Sbjct: 330 GRWIHV-YIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFG 388

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           +A HG    A ++   M++  +E D ITF+G+++AC+HAGL D G++ F  M  ++ I P
Sbjct: 389 FAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEP 448

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            +EHY CM+DL  R+G+ ++A ++IN M       +W ++L AC+              L
Sbjct: 449 KLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKL 508

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + ++P +   YVLLSN+YA +  W + ARVR L+ND+ +KK  G S IE+ +  + FL G
Sbjct: 509 MKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIG 568

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D  HPQ+ +IY  LEE+ + L + G+  DTS VLQ++++E KE  LS HSE+LAIAFGL+
Sbjct: 569 DKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLI 628

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLC 832
           +T  G  L+IVKNLRVC +CH   KLISK+ +R+I+ RD +RFHHFK+G+C
Sbjct: 629 STKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 228/499 (45%), Gaps = 41/499 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F    + N + +N ++  +   S    ALNL++ +  LGL     T   + K+C    
Sbjct: 33  SVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSK 92

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+Q+H + +K G   D++V TSL+ +Y +   VED  +VFD  +  +VVS+T++++
Sbjct: 93  AAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMIT 152

Query: 153 GYAR-------NKMNDRV------------------------LELFHRMQVEGIKPNSFT 181
           GYA         KM D +                        LELF+ M    +KP+  T
Sbjct: 153 GYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDEST 212

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
            +TVL      G V    Q+H+ +  +G      + NALI +Y K   +  A  +F+G++
Sbjct: 213 MATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQ 272

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN+++ GY     H EA   F  M   G      T +S++  CA    + + R 
Sbjct: 273 YKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRW 332

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   GI  + +++T L+  Y+KCG +E A+++F  +   K + S  AMI G   
Sbjct: 333 IHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILN-KSLSSCNAMIFGFAM 391

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT-----NYEKSFS 414
           +G  D A +   +M ++G+ P+  T+  +L+A        +   I K+       E    
Sbjct: 392 HGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLE 451

Query: 415 VGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS- 472
               +++   + G+  EA ++   +  E D V W ++L       + E    I ++L   
Sbjct: 452 HYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKI 511

Query: 473 EGVKPNEFTFSSVINACTA 491
           E   P  +   S I A +A
Sbjct: 512 EPKNPGSYVLLSNIYATSA 530



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 211/457 (46%), Gaps = 39/457 (8%)

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           VF  + E N +SW +++ G+A +      L L+  M   G+ PNS+TF  +    A    
Sbjct: 34  VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR----------- 243
                Q+H  ++K G  V   V  +LISMY ++ +V DA  VFD    R           
Sbjct: 94  AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153

Query: 244 --------------------DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
                               D ++WN+M++GY     + EA E FN M     +   ST 
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
            +V+  C  +  + L RQ+HS +  +G   +  +   L+  YSKCG+ME A  +F  + +
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGL-Q 272

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---- 399
            KDV+SW  +I G+        A+  F +M + G  PN  T   IL A   +        
Sbjct: 273 YKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRW 332

Query: 400 VHAHIIK--TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           +H +I K       + S+ T+L++ Y K G ++ A +VF+ I  K + + +AM+ G+A  
Sbjct: 333 IHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMH 392

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G  + A  +  ++  +G++P++ TF  +++AC+    +    K F + ++  ++   L  
Sbjct: 393 GRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEH 452

Query: 518 SSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
              ++ +  + G  + A E+      + D V W S++
Sbjct: 453 YGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 38/299 (12%)

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           TNY  S  +   +L  Y     L  A  VF+ I E + ++W+ M+ G+A   D   A+ +
Sbjct: 8   TNYALSKLLDFCILTPYFHG--LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNL 65

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           Y  + S G+ PN +TF  +  +C A S A ++GKQ HA  +K  L   L V ++L++MY+
Sbjct: 66  YVYMISLGLSPNSYTFPFLFKSC-AKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYA 124

Query: 527 KKGNIESASEVFKRQRKR-------------------------------DLVSWNSMICG 555
           + G +E A +VF     R                               D+VSWN+MI G
Sbjct: 125 QNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISG 184

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           YA+ G  K+ALE+F EM + D++ D  T   V++ CTH+G V+ G+Q     ++ H    
Sbjct: 185 YAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHS-WIDNHGFGS 243

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVL 674
            ++  + ++DLYS+ G +E+A  +   + +      W T++     I+   H  A+ V 
Sbjct: 244 NLKLVNALIDLYSKCGEMERAHGLFEGLQY-KDVISWNTLIGGYAYIN--HHKEALLVF 299



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 155/333 (46%), Gaps = 13/333 (3%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K Q +FD  P ++ V +N ++  Y     ++EAL LF  + ++ +    ST+++VL TC 
Sbjct: 162 KAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCT 221

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
              +   GRQ+H      GF  ++ +  +L+DLY +   +E    +F+ +   +V+SW +
Sbjct: 222 HSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNT 281

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+ GYA    +   L +F  M   G  PN  T  ++L   A  G +     +H  + K  
Sbjct: 282 LIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKL 341

Query: 210 GEVV--TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
             ++  TS+  +LI MY K   +  A  VFD + ++   + N+M+ G+  +     AF+ 
Sbjct: 342 KGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDL 401

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT-----GLM 322
            + M   G E    TFV ++  C+      L R++        +  D+ I       G M
Sbjct: 402 LSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKS-----MTLDYRIEPKLEHYGCM 456

Query: 323 V-AYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           +    + G  ++A ++ + M    D V W +++
Sbjct: 457 IDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 111/228 (48%), Gaps = 4/228 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++   LF+    ++ + +N L+  Y   + H+EAL +F  + +LG      T+ S+L  C
Sbjct: 262 ERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPAC 321

Query: 89  GCLFDHVFGRQVHCECVK--SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
             L     GR +H    K   G   + ++ TSL+D+Y +  N+E   +VFD +   ++ S
Sbjct: 322 AHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSS 381

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMV 205
             +++ G+A +   D   +L  RM+ +GI+P+  TF  +L   +  G+     ++  +M 
Sbjct: 382 CNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMT 441

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMV 252
           +    E        +I +  +S + ++A  + + M  + D + W S++
Sbjct: 442 LDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/647 (36%), Positives = 368/647 (56%), Gaps = 29/647 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N ++  Y K   +  AR +FD     D++++N++++GY      + A   F  M   G E
Sbjct: 78  NVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFE 137

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T   +I  C     + L +QLH   +  G D   ++    +  YSK G + +A  +
Sbjct: 138 VDGFTLSGLIAACCD--RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M  ++D VSW +MI  + Q+     A+  + +M  +G + + FT + +L A  ++  
Sbjct: 196 FYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD---EAAKVFELIDEKDIVAWSAM 450
                Q H  +IK  + ++  VG+ L++ Y K G  D   ++ KVF+ I   D+V W+ M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTM 315

Query: 451 LAGYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++GY+   + +E AVK +RQ+   G +P++ +F  V +AC+  S+   QGKQ H  +IK+
Sbjct: 316 ISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP-SQGKQIHGLAIKS 374

Query: 510 KL-NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            + +N + V++AL+++Y K GN+  A  VF R  + + VS+N MI GYAQHGH  +AL +
Sbjct: 375 NIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRL 434

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           ++ M    +  + ITF+ +++AC H G VDEGQ+YF+ M     I P  EHYSCM+DL  
Sbjct: 435 YQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLG 494

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG LE+A   I+ MP+   +  W  +L ACR              L+ +QP  +  YV+
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVM 554

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+NMYA  G W+E A VRK M  ++++K+ G SWIEVK K + F+A D SHP   ++   
Sbjct: 555 LANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI---LSQHSERLAIAFGLVATPAGAPLQI 791
           LEE+  ++K  GY  D  + +   D+  +      L  HSE+LA+AFGL++T  G  + +
Sbjct: 615 LEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDGEEIVV 674

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VKNLR+CGDCH  IK +S +  R+I+VRD  RFH FK+G CSCGDYW
Sbjct: 675 VKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 252/520 (48%), Gaps = 25/520 (4%)

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTS---------LVDLY 123
           G  L    + S++ +   L +H       C C+   +AR    ST          +V  Y
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLS--YARAAFDSTEEPNVFSYNVIVKAY 84

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
            + + +   R++FD+  + + VS+ +L+SGYA  +     + LF RM+  G + + FT S
Sbjct: 85  AKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLS 144

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED- 242
            ++    D   V    Q+H   +  G +  +SV NA ++ Y K  ++R+A +VF GM+  
Sbjct: 145 GLIAACCDR--VDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGL 202

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           RD ++WNSM+  Y  ++   +A   +  M   G ++   T  SV+    +   L   RQ 
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCG---KMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           H +++K G   + ++ +GL+  YSKCG    M D+ K+F  +    D+V W  MISG+  
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS-PDLVLWNTMISGYSM 321

Query: 360 NGA-IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKS-F 413
           N    + AV  F QM R G RP+  ++  + +A   +S      Q+H   IK+N   +  
Sbjct: 322 NEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRI 381

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           SV  AL++ Y K G L +A +VF+ + E + V+++ M+ GYAQ G    A+++Y+++   
Sbjct: 382 SVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDS 441

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G+ PN  TF ++++AC       E  K F+      K+       S ++ +  + G +E 
Sbjct: 442 GIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501

Query: 534 ASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           A         K   V+W +++    +H +   A    KE+
Sbjct: 502 AERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKEL 541



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 206/433 (47%), Gaps = 15/433 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD +PQ + V YN L+  Y        A+ LF  +R LG  + G TLS ++  C   
Sbjct: 94  RQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDR 153

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
            D +  +Q+HC  V  GF    +V+ + V  Y +   + +   VF  M+   + VSW S+
Sbjct: 154 VDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSM 211

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +  Y ++K   + L L+  M  +G K + FT ++VL  L     +    Q H  +IK G 
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271

Query: 211 EVVTSVCNALISMYLKS---KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM-EAFE 266
              + V + LI  Y K      + D+  VF  +   D + WN+M++GY  NE H  EA +
Sbjct: 272 HQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVK 331

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAY 325
           +F  M   G      +FV V   C+        +Q+H   +K+ I  +  ++   L+  Y
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLY 391

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            K G + DA ++F  M E+ + VS+  MI G+ Q+G    A+  + +M   G+ PN  T+
Sbjct: 392 YKSGNLLDARRVFDRMPEL-NAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITF 450

Query: 386 SIILTAQP---AVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID 440
             IL+A      V   Q + + +K  +  E      + +++   + G L+EA +  + + 
Sbjct: 451 VAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP 510

Query: 441 EK-DIVAWSAMLA 452
            K   VAW+A+L 
Sbjct: 511 YKPGSVAWAALLG 523



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 20/244 (8%)

Query: 26  FYSK--------KDQSLFDRSPQRNFVEYNRLLFEYCRDSLH-QEALNLFLGIRRLGLPL 76
           FYSK          + +F      + V +N ++  Y  +  H +EA+  F  ++R+G   
Sbjct: 284 FYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRP 343

Query: 77  FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRV 135
              +   V   C  L     G+Q+H   +KS    + ++V+ +L+ LY ++ N+ D RRV
Sbjct: 344 DDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRV 403

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA----- 190
           FD M E N VS+  ++ GYA++      L L+ RM   GI PN+ TF  +L   A     
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKV 463

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWN 249
           DEG         T  I+   E  +     +I +  ++  + +A    D M  +  S+ W 
Sbjct: 464 DEGQKYFNTMKETFKIEPEAEHYS----CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519

Query: 250 SMVA 253
           +++ 
Sbjct: 520 ALLG 523


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/793 (31%), Positives = 413/793 (52%), Gaps = 79/793 (9%)

Query: 96  FGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            G  +H   +K G    D  V ++ +  Y R  ++    ++FD+M + + ++W  ++   
Sbjct: 5   LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            R+   ++ +ELF  MQ  G K    T   +L V +++   A   Q+H  V++ G E   
Sbjct: 65  LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDR------------------------------- 243
           S+CN+LI MY ++  +  +R VF+ M+DR                               
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184

Query: 244 ----DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
               D +TWNS+++GY +  L  +A      M +AG + + S+  S+++  A    L+L 
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           + +H  +L+N + +D  + T L+  Y K G +  A  +F MM + K++V+W +++SG   
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM-DAKNIVAWNSLVSGLSY 303

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL 419
              +  A     +M +EG++P+  T++                         S + G A 
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWN-------------------------SLASGYAT 338

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
           L    K   LD   K+ E     ++V+W+A+ +G ++ G+   A+K++ ++  EGV PN 
Sbjct: 339 LGKPEKA--LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNA 396

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
            T S+++      S  +  GK+ H   ++  L     V++ALV MY K G+++SA E+F 
Sbjct: 397 ATMSTLLKILGCLSL-LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
             + + L SWN M+ GYA  G  ++ +  F  M    +E D ITF  V++ C ++GLV E
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G +YFD+M + + I PT+EH SCMVDL  R+G L++A D I  M     AT+W   L++C
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC 575

Query: 660 --------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
                         RL  L+PH+SA Y+++ N+Y+    W++  R+R LM + +V+ +  
Sbjct: 576 KIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDL 635

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
           +SWI++    + F A   +HP    IY +L +L + +K +GY PDTS + QDI D  KE 
Sbjct: 636 WSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEK 695

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
           +L  H+E+LA+ +GL+     AP+++VKN  +C D HTV K +S L  R+IV+++  R H
Sbjct: 696 LLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVH 755

Query: 826 HFKEGLCSCGDYW 838
           HF++G CSC D W
Sbjct: 756 HFRDGKCSCNDSW 768



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 256/583 (43%), Gaps = 78/583 (13%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+R+ + +N ++    R    ++A+ LF  ++  G   + ST+  +L+ C     
Sbjct: 45  LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG 104

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL-- 151
              GRQ+H   ++ G   +V++  SL+ +Y R   +E  R+VF+ M + N+ SW S+L  
Sbjct: 105 FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSS 164

Query: 152 ---------------------------------SGYARNKMNDRVLELFHRMQVEGIKPN 178
                                            SGYA   ++   + +  RMQ+ G+KP+
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           + + S++L  +A+ G +     +H  +++N       V   LI MY+K+  +  AR VFD
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M+ ++ + WNS+V+                  GL+ A L                 L+ 
Sbjct: 285 MMDAKNIVAWNSLVS------------------GLSYACL-----------------LKD 309

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE---MKDVVSWTAMIS 355
           A  L  ++ K GI  D      L   Y+  GK E A  +   M+E     +VVSWTA+ S
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
           G  +NG    A+  F +M  EGV PN  T S +L     +S      +VH   ++ N   
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              V TAL++ Y K G L  A ++F  I  K + +W+ ML GYA  G  E  +  +  + 
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
             G++P+  TF+SV++ C       E  K F     +  +   +   S +V +  + G +
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549

Query: 532 ESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
           + A +  +    K D   W + +     H   + A   +K ++
Sbjct: 550 DEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQ 592


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/639 (37%), Positives = 365/639 (57%), Gaps = 23/639 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LI+ Y K   +  AR +FD M  R++++ N +++GY +   H +A         +  E
Sbjct: 49  NHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALALLKAADFSLNE 108

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
              ST +S     A  +   + RQ H   +K+G+     +   ++  Y +C  +EDA K+
Sbjct: 109 YVLSTALSA---AAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKV 165

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQP 393
           F  +    D+ ++ +MI+G L  G  D ++     M  E  + +  +Y  +L    + + 
Sbjct: 166 FENVSGF-DIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKE 224

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            +   QVHA  +K   E++  VG+AL++ Y K     +A   FE++ EK++V+W+A++  
Sbjct: 225 LLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTA 284

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    E A++++  L  EGV+PNEFT++  +N+C A  AA++ G    A ++K     
Sbjct: 285 YTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSC-AGLAALKNGNALSASAMKTGHWG 343

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
           AL V +AL+ MYSK G+I  A  VF     RD+VSWNS+I GYA HG  ++A+ VF +M 
Sbjct: 344 ALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDML 403

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
             ++    +TF+GV+ AC   GLVDEG  Y +IM+ E  I P  EHY+CMV L  RAG L
Sbjct: 404 LAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRL 463

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
           ++A   I           W+++L++C+              ++ L+P+D   YVLLSNMY
Sbjct: 464 DEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQLKPNDVGTYVLLSNMY 523

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A    W    +VRKLM +R V+KE G SWI+V ++ + F + D +H   NQI  KL+EL 
Sbjct: 524 AKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDKNHKWINQITIKLKELI 583

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            ++K  GY P+ + VL D++ E KE  L  HSE++A+AFGL+ +P G  ++I+KNLR+C 
Sbjct: 584 GQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGLIHSPEGETIRIMKNLRICD 643

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH  IKLIS + RR IVVRDT RFH   +G+CSC DYW
Sbjct: 644 DCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSCDDYW 682



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 238/494 (48%), Gaps = 23/494 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +H + +++    DV     L+  Y +   +   R++FD M   N VS   L+SGYA 
Sbjct: 30  GKAIHAQMIRAAHF-DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
              +   L L   ++      N +  ST L   A         Q H   +K+G +    V
Sbjct: 89  AGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYV 145

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
           CNA++ MY +   V DA  VF+ +   D   +NSM+ G++       +     +M     
Sbjct: 146 CNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE 205

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    ++V+V+  CA+TKEL L  Q+H+Q LK  ++ +  + + L+  Y KC    DA  
Sbjct: 206 QWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHS 265

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
            F ++ E K+VVSWTA+++ + QN   + A+  F  +  EGVRPN FTY++ L +   ++
Sbjct: 266 AFEVLPE-KNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLA 324

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             +    + A  +KT +  + SV  AL+N Y K G + +A +VF  +  +D+V+W++++ 
Sbjct: 325 ALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVII 384

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HACSI 507
           GYA  G    A+ ++  +    + P+  TF  V+ AC A    V++G  +         I
Sbjct: 385 GYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLAC-AQLGLVDEGLYYLNIMMKEMGI 443

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICG---YAQHGHTK 563
           K    +  C    +V +  + G ++ A + +       D+V+W S++     Y  +G   
Sbjct: 444 KPGREHYTC----MVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGH 499

Query: 564 KALEVFKEMRRQDL 577
           +  E   +++  D+
Sbjct: 500 RVAEQILQLKPNDV 513



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 194/427 (45%), Gaps = 10/427 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P RN V  N L+  Y     H +AL L   ++     L    LS+ L     +
Sbjct: 65  RQMFDAMPSRNAVSGNLLMSGYASAGRHSDALAL---LKAADFSLNEYVLSTALSAAAHV 121

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             +  GRQ H   VKSG      V  +++ +Y +  +VED  +VF++++  ++ ++ S++
Sbjct: 122 RSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMI 181

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+      D  + +   M  E  + +  ++  VLG  A    +    QVH   +K   E
Sbjct: 182 NGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLE 241

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V +AL+ MY K    RDA + F+ + +++ ++W +++  Y  NE   +A + F ++
Sbjct: 242 QNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDL 301

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            + G      T+   +  CA    L+    L +  +K G     ++   LM  YSK G +
Sbjct: 302 EIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSI 361

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA ++F  M   +DVVSW ++I G+  +G    A+  F  M    + P+  T+  +L A
Sbjct: 362 HDAWRVFLSM-PWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLA 420

Query: 392 QPAVSPFQVHAHIIKTNY-EKSFSVG----TALLNAYVKKGILDEAAK-VFELIDEKDIV 445
              +       + +     E     G    T ++    + G LDEA + +       D+V
Sbjct: 421 CAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVV 480

Query: 446 AWSAMLA 452
           AW ++L+
Sbjct: 481 AWKSLLS 487


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/647 (37%), Positives = 368/647 (56%), Gaps = 56/647 (8%)

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           R + +W   +     +    EA  T+  M ++GA      F +V+K  +  ++L+   Q+
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 303 HSQVLK---------------------NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           H+  +K                      GI         LM  Y+K G+++D+  +F   
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-- 399
            + +D+VSW  MIS   Q+     A+ FF  M  EGV  +G T + +L   PA S  +  
Sbjct: 175 VD-RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVL---PACSHLERL 230

Query: 400 -----VHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                +HA++++ N   E SF VG+AL++ Y     ++   +VF+ I  + I  W+AM++
Sbjct: 231 DVGKEIHAYVLRNNDLIENSF-VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMIS 289

Query: 453 GYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           GYA+ G  E A+ ++ ++    G+ PN  T +SV+ AC    AA+ +GK+ HA +I+  L
Sbjct: 290 GYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNML 349

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            + + V SALV MY+K G +  +  VF     +++++WN +I     HG  ++ALE+FK 
Sbjct: 350 ASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKN 409

Query: 572 M-----RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           M     R  + + + +TFI V  AC+H+GL+ EG   F  M ++H + PT +HY+C+VDL
Sbjct: 410 MVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDL 469

Query: 627 YSRAGMLEKAMDIINRMPFAASAT-VWRTVLAACR--------------LISLQPHDSAI 671
             RAG LE+A +++N MP        W ++L ACR              L+ L+P+ ++ 
Sbjct: 470 LGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASH 529

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLLSN+Y++ G W +   VRK M    VKKE G SWIE +++ + F+AGD+SHPQS Q+
Sbjct: 530 YVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQL 589

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           +  LE LS +++  GY PDTS VL ++D++ KE +L  HSE+LAIAFG++ TP G  +++
Sbjct: 590 HGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRV 649

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVC DCH   K ISK+  R+I+VRD  RFHHFKEG CSCGDYW
Sbjct: 650 AKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 190/410 (46%), Gaps = 35/410 (8%)

Query: 14  QTKQPP---KSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR 70
           QT+ PP   K   SP  SK        SP R+   +   L    R +  +EA++ ++ + 
Sbjct: 27  QTQPPPSIQKPTASPLTSKTPPK--PTSPSRSTASWVDALRSRTRSNDFREAISTYIEMT 84

Query: 71  RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMR---- 125
             G         +VLK    L D   G Q+H   VK G+ +  V V+ +LV++Y +    
Sbjct: 85  VSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGI 144

Query: 126 -----TNN-----------VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
                TNN           V+D + +F+   + ++VSW +++S ++++      L  F  
Sbjct: 145 GDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRL 204

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS-VCNALISMYLKSK 228
           M +EG++ +  T ++VL   +    +    ++H  V++N   +  S V +AL+ MY   +
Sbjct: 205 MVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR 264

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVI 287
            V   R VFD +  R    WN+M++GY  N L  +A   F  M  +AG     +T  SV+
Sbjct: 265 QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVM 324

Query: 288 KLCA-TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
             C  +   +   +++H+  ++N +  D  + + L+  Y+KCG +  + ++F+ M   K+
Sbjct: 325 PACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPN-KN 383

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR-----PNGFTYSIILTA 391
           V++W  +I     +G  + A+  F  M  E  R     PN  T+  +  A
Sbjct: 384 VITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAA 433



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++LF+    R+ V +N ++  + +     EAL  F  +   G+ L G T++SVL  C  L
Sbjct: 168 KALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 227

Query: 92  FDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G+++H   +++     +  V ++LVD+Y     VE GRRVFD +    +  W ++
Sbjct: 228 ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAM 287

Query: 151 LSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADE-GIVATAVQVHTMVIKN 208
           +SGYARN ++++ L LF  M +V G+ PN+ T ++V+         +A   ++H   I+N
Sbjct: 288 ISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRN 347

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                 +V +AL+ MY K   +  +R VF+ M +++ ITWN ++     +    EA E F
Sbjct: 348 MLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELF 407

Query: 269 NNM----GLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNI 317
            NM    G  G A+    TF++V   C+           HS ++  G++       DH +
Sbjct: 408 KNMVAEAGRGGEAKPNEVTFITVFAACS-----------HSGLISEGLNLFYRMKHDHGV 456

Query: 318 RTG------LMVAYSKCGKMEDASKIFSMM-REMKDVVSWTAMI 354
                    ++    + G++E+A ++ + M  E   V +W++++
Sbjct: 457 EPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 500


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/607 (37%), Positives = 352/607 (57%), Gaps = 51/607 (8%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK---------- 330
           S F  +++ C     L   +Q+HS ++ +G   D  I   L+  YSK G+          
Sbjct: 63  SLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSN 122

Query: 331 ---------------------MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
                                +E A K+F  M E +++ +W AMI+G  Q      A++ 
Sbjct: 123 MPRRNVMSFNILINGYLQLGDLESAQKLFDEMSE-RNIATWNAMIAGLTQFEFNKQALSL 181

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F +M   G  P+ FT   +L     +       +VHA ++K  +E S  VG++L + Y+K
Sbjct: 182 FKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK 241

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G L +  K+ + +  + +VAW+ ++AG AQ G  E  +  Y  +   G +P++ TF SV
Sbjct: 242 SGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSV 301

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           ++AC+   A + QG+Q HA  IKA  ++ L V S+L++MYS+ G +E + + F  +   D
Sbjct: 302 LSACSEL-ATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFD 360

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           +V W+SMI  Y  HG  ++ALE+F +M    +E + +TF+ ++ AC+H+GL ++G +YFD
Sbjct: 361 VVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFD 420

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL---- 661
           +MV ++ + P +EHY+C+VDL  RAG LE+A  +I  MP      +W+T+LAAC+L    
Sbjct: 421 LMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEA 480

Query: 662 ----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                     I L P D+A YVLLSN++A+  +W   +++RK M DR V+KE G SW+E+
Sbjct: 481 EMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLEL 540

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           KN  + F  GD SHPQ  +I   L+EL + LK  GY P+   VL D+D+E KE  L+ HS
Sbjct: 541 KNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHS 600

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+ AIAF L+ T    P++++KNLRVC DCH  IK IS++  R+I+VRD +RFHHFK+G 
Sbjct: 601 EKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGE 660

Query: 832 CSCGDYW 838
           CSCG+YW
Sbjct: 661 CSCGNYW 667



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 226/499 (45%), Gaps = 54/499 (10%)

Query: 15  TKQPPKSLRS---PFYSKKDQSLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR 70
            ++P +S  +   P YS   +SL  + S   +  E+  L    C D   ++A + F    
Sbjct: 3   NRKPSRSFNAFLNPLYSFTVRSLSMKISSSASLQEFTSL----CNDGRIKQAYDTFTSEI 58

Query: 71  RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY------- 123
                LF   L S +K  G LF    G+QVH   + SG ++D  +S  L++ Y       
Sbjct: 59  WSDPSLFSHLLQSCIKL-GSLFG---GKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFK 114

Query: 124 ------------------------MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
                                   ++  ++E  +++FD+M+E N+ +W ++++G  + + 
Sbjct: 115 SSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEF 174

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
           N + L LF  M   G  P+ FT  +VL   A    +    +VH  ++K G E+ + V ++
Sbjct: 175 NKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSS 234

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L  MY+KS  + D   +   M  R  + WN+++AG   N    E    +N M +AG    
Sbjct: 235 LAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPD 294

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           + TFVSV+  C+    L   +Q+H++V+K G      + + L+  YS+ G +ED+ K F 
Sbjct: 295 KITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAF- 353

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------Q 392
           + RE  DVV W++MI+ +  +G  + A+  F QM    +  N  T+  +L A       +
Sbjct: 354 VDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKE 413

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAML 451
                F +   + K   +      T +++   + G L+EA  +   +  + D + W  +L
Sbjct: 414 KGTEYFDL--MVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLL 471

Query: 452 AGYAQIGDTEGAVKIYRQL 470
           A      + E A +I  ++
Sbjct: 472 AACKLHKEAEMAERISEEI 490



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 2/133 (1%)

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           ++ SA L  +  + +     + Y   TSE +  +   FS ++ +C     ++  GKQ H+
Sbjct: 29  ISSSASLQEFTSLCNDGRIKQAYDTFTSE-IWSDPSLFSHLLQSCIKL-GSLFGGKQVHS 86

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             I +  +    +S+ L+  YSK G  +S+  +F    +R+++S+N +I GY Q G  + 
Sbjct: 87  LIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLES 146

Query: 565 ALEVFKEMRRQDL 577
           A ++F EM  +++
Sbjct: 147 AQKLFDEMSERNI 159


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 258/754 (34%), Positives = 423/754 (56%), Gaps = 40/754 (5%)

Query: 68  GIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN 127
           GIR    P+   T SS+LK+C        G+ VH   ++     D  +  SL+ LY ++ 
Sbjct: 56  GIR----PMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111

Query: 128 NVEDGRRVFDDMN---ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           ++   + VF+ M    + +VVSW+++++ +  N      ++LF      G+ PN + ++ 
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTA 171

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSK-MVRDARAVFDGMED 242
           V+   ++   V     +   ++K G  E    V  +LI M++K +    +A  VFD M +
Sbjct: 172 VIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
            + +TW  M+   +      EA   F +M L+G E  + T  SV   CA  + L L RQL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQL 291

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           HS  +++G+  D  +   L+  Y+KC   G ++D  K+F  M++   V+SWTA+I+G++Q
Sbjct: 292 HSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQD-HSVMSWTALITGYMQ 348

Query: 360 NGAIDL-AVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSF 413
           N  +   A+N F +M  +G V PN FT+S    A   VS      QV  H  K     + 
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNS 408

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           SV  ++++ +VK   +++A   FE + EK++V+++  L G  +  D E A ++  ++   
Sbjct: 409 SVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAER 468

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
            +  + FTF+S+++   A   ++ +G+Q H+  +K  L+    V +AL++MYSK G+I++
Sbjct: 469 ELGVSAFTFASLLSG-VANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDT 527

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           AS VF     R+++SW SMI G+A+HG  ++ LE F +M ++ ++ + +T++ +++AC+H
Sbjct: 528 ASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSH 587

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
            GLV EG ++F+ M  +H I P MEHY+CMVDL  RAG+L  A + IN MPF A   VWR
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647

Query: 654 TVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           T L ACR              ++   P++ A Y+ LSN+YA+ G W+E   +R+ M +R 
Sbjct: 648 TFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERN 707

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           + KE G SWIEV +K + F  GD SHP ++QIY +L+ L T +K  GY PDT  VL  ++
Sbjct: 708 LVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGYVPDTDLVLHKLE 767

Query: 760 DEHKEA----ILSQHSERLAIAFGLVATPAGAPL 789
           +E  EA    +L QHSE++A+AFGL++T    P+
Sbjct: 768 EEDDEAKKEMLLYQHSEKIAVAFGLISTAKSRPM 801



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 153/532 (28%), Positives = 258/532 (48%), Gaps = 65/532 (12%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+  + N V +  ++    +    +EA+  FL +   G      TLSSV   C  L +
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN---NVEDGRRVFDDMNESNVVSWTSL 150
              GRQ+H   ++SG A DV    SLVD+Y + +   +V+D R+VFD M + +V+SWT+L
Sbjct: 285 LSLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTAL 342

Query: 151 LSGYARN-KMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++GY +N  +    + LF  M  +G ++PN FTFS+      +        QV     K 
Sbjct: 343 ITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKR 402

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G    +SV N++ISM++K   + DAR  F+ + +++ +++N+ + G   N     AFE  
Sbjct: 403 GLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELL 462

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + +      ++  TF S++   A    LR   Q+HSQVLK G+  +  +   L+  YSKC
Sbjct: 463 SEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKC 522

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++ AS++FS+M + ++V+SWT+MI+G  ++G  +  +  F QMT+EGV+PN  TY  I
Sbjct: 523 GSIDTASRVFSLM-DNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAI 581

Query: 389 LTAQPAVSPFQ---------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           L+A   V                H IK   E        +++   + G+L +A   FE I
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY----ACMVDLLCRAGLLTDA---FEFI 634

Query: 440 D----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           +    + D++ W   L       +TE      R++      PNE            P+A 
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--FDPNE------------PAAY 680

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
           ++                       L  +Y+  G  E ++E+ ++ ++R+LV
Sbjct: 681 IQ-----------------------LSNIYASAGKWEESTEMRRKMKERNLV 709



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 150/305 (49%), Gaps = 19/305 (6%)

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRP-NGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
           +I  HL  G +  AV+    M R+G+RP +  T+S +L +      F+    VHA +I+ 
Sbjct: 32  LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEF 91

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELI---DEKDIVAWSAMLAGYAQIGDTEGAV 464
             E    +  +L++ Y K G L +A  VFE +    ++D+V+WSAM+A +   G    A+
Sbjct: 92  EIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAI 151

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSALVT 523
           K++ +    G+ PN++ +++VI AC+  S  V  G+      +K     + +CV  +L+ 
Sbjct: 152 KLFVEFLEMGLVPNDYCYTAVIRACSN-SDFVGVGRVILGFLMKTGHFESDVCVGCSLID 210

Query: 524 MYSKKGN-IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           M+ K  N  E+A +VF +  + ++V+W  MI    Q G  ++A+  F +M     E D  
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-MVDLYSRA---GMLEKAMD 638
           T   V +AC     +  G+Q     +         +   C +VD+Y++    G ++    
Sbjct: 271 TLSSVFSACAELENLSLGRQLHSWAIRSG----LADDVECSLVDMYAKCSADGSVDDCRK 326

Query: 639 IINRM 643
           + +RM
Sbjct: 327 VFDRM 331



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 145/324 (44%), Gaps = 55/324 (16%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI--RRLGLPLFGSTLSSVLKTCG 89
           ++ F+   ++N V YN  L   CR+   + A  L   I  R LG+  F  T +S+L    
Sbjct: 428 RTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAF--TFASLLSGVA 485

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            +     G Q+H + +K G + +  V  +L+ +Y +  +++   RVF  M+  NV+SWTS
Sbjct: 486 NVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTS 545

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G+A++   +RVLE F++M  EG+KPN  T+  +L   +  G+V+   +         
Sbjct: 546 MITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFN------ 599

Query: 210 GEVVTSVCNALISMY----LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
                       SMY    +K KM   A                 MV       L  +AF
Sbjct: 600 ------------SMYEDHKIKPKMEHYA----------------CMVDLLCRAGLLTDAF 631

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG---LM 322
           E  N M      L   TF+   ++ + T+  +LA        +  ++FD N       L 
Sbjct: 632 EFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA-------RKILEFDPNEPAAYIQLS 684

Query: 323 VAYSKCGKMEDASKIFSMMREMKD 346
             Y+  GK E++++   M R+MK+
Sbjct: 685 NIYASAGKWEESTE---MRRKMKE 705


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/758 (33%), Positives = 414/758 (54%), Gaps = 30/758 (3%)

Query: 106 KSGFARDVNVS----TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
           + G +R ++ S     SL+  ++    +++    F  +          ++ G+A   +  
Sbjct: 43  EGGASRPISSSGSRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPL 102

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
             L  +  M   G +P+ FTF  VL   A  G +      H  VIK G        N+L+
Sbjct: 103 DALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLV 162

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           ++Y K  +V DA  VFDGM  RD ++WN+MV GYV+N +   A   F  M  A      S
Sbjct: 163 ALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDS 222

Query: 282 T-FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
              ++ +  C     L L R++H   +++G++ D  + T L+  Y KCG +  A  +F+ 
Sbjct: 223 VGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAK 282

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPAVSPF 398
           M  ++ VV+W  MI G+  N     A + F QM  +G +    T   +LTA  Q   S F
Sbjct: 283 M-PLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLF 341

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
              VHA++++ ++     + TALL  Y K G ++ + K+F  I +K +V+W+ M+A Y  
Sbjct: 342 GRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMY 401

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
           +   + A+ ++ +L ++ + P+ FT ++V+ A      ++ Q KQ H+  +K    ++  
Sbjct: 402 MEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVL-LGSIRQCKQMHSYIVKLGYGDSTL 460

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           + +A++ MY++ GNI ++ E+F +   +D++SWN++I GYA HG  K ALE+F EM+   
Sbjct: 461 IMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSG 520

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +E +  TF+ V+TAC+ +GL  EG + F+ M  E+ + P +EHY CM DL  RAG L + 
Sbjct: 521 MEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREV 580

Query: 637 MDIINRMPFAASATVWRTVL--------------AACRLISLQPHDSAIYVLLSNMYAAT 682
           +  I  MP A ++ +W ++L              AA R+  L+ +++  YV+LS+MYA  
Sbjct: 581 LRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADA 640

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G W++  R+R LM ++ +++    S +E+ NK  SF+ GD+SHPQS +I+   + LS   
Sbjct: 641 GRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILS--- 697

Query: 743 KDAGYKPDTSYVLQDIDD--EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           ++ G   D+S  L+D D        + ++HS RLA+AFGL+++ AG+P+ + KN+RVC  
Sbjct: 698 RNIGEDLDSSSNLRDSDPFASSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNH 757

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH  +KLISK   R IVV DT  +H F +G C CGDYW
Sbjct: 758 CHHALKLISKYSGRKIVVGDTKIYHIFSDGSCCCGDYW 795



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 215/430 (50%), Gaps = 6/430 (1%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   VLK C        GR  H   +K G   DV  + SLV LY +   V D  RVFD M
Sbjct: 122 TFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGM 181

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATA 198
              ++VSW +++ GY  N M    L  F  M     +  +S      L     E  +A  
Sbjct: 182 PARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALG 241

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            ++H   I++G E    V  +L+ MY K   V  A  VF  M  R  +TWN M+ GY  N
Sbjct: 242 REIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALN 301

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           E  ++AF+ F  M + G ++   T ++++  CA T+     R +H+ V++        + 
Sbjct: 302 ERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLE 361

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y K GK+E + KIF  + + K +VSW  MI+ ++       A+  F ++  + +
Sbjct: 362 TALLEMYGKVGKVESSEKIFGQITD-KTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPL 420

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            P+ FT + ++ A   +       Q+H++I+K  Y  S  +  A+++ Y + G +  + +
Sbjct: 421 YPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASRE 480

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F+ +  KD+++W+ ++ GYA  G  + A++++ ++   G++PNE TF SV+ AC+    
Sbjct: 481 IFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGL 540

Query: 495 AVEQGKQFHA 504
             E  K+F++
Sbjct: 541 EAEGWKEFNS 550



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 171/365 (46%), Gaps = 10/365 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R+ V +N ++  Y  + +   AL  F  +    L +   ++  +     C 
Sbjct: 175 ERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMND-ALQVGHDSVGVIAALAACC 233

Query: 92  FDHVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            +     GR++H   ++ G  +DV V TSLVD+Y +  NV     VF  M    VV+W  
Sbjct: 234 LESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNC 293

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GYA N+      + F +M+V+G +    T   +L   A          VH  V++  
Sbjct: 294 MIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRH 353

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF- 268
                 +  AL+ MY K   V  +  +F  + D+  ++WN+M+A Y+  E++ EA   F 
Sbjct: 354 FLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFL 413

Query: 269 --NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
              N  L     T +T V    L  +   +R  +Q+HS ++K G      I   +M  Y+
Sbjct: 414 ELLNQPLYPDYFTMTTVVPAFVLLGS---IRQCKQMHSYIVKLGYGDSTLIMNAVMHMYA 470

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           +CG +  + +IF  M   KDV+SW  +I G+  +G   +A+  F +M   G+ PN  T+ 
Sbjct: 471 RCGNIVASREIFDKM-PGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFV 529

Query: 387 IILTA 391
            +LTA
Sbjct: 530 SVLTA 534



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 135/262 (51%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F + P R  V +N ++  Y  +    +A + F+ +R  G  +   T  ++L  C   
Sbjct: 277 ENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQT 336

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              +FGR VH   V+  F   V + T+L+++Y +   VE   ++F  + +  +VSW +++
Sbjct: 337 ESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMI 396

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + Y   +M    + LF  +  + + P+ FT +TV+      G +    Q+H+ ++K G  
Sbjct: 397 AAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYG 456

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T + NA++ MY +   +  +R +FD M  +D I+WN+++ GY  +     A E F+ M
Sbjct: 457 DSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEM 516

Query: 272 GLAGAELTRSTFVSVIKLCATT 293
             +G E   STFVSV+  C+ +
Sbjct: 517 KCSGMEPNESTFVSVLTACSVS 538



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 87/170 (51%), Gaps = 4/170 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLK 86
           +  + +F +   +  V +N ++  Y    ++QEA+ LFL +  L  PL+    T+++V+ 
Sbjct: 375 ESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLEL--LNQPLYPDYFTMTTVVP 432

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L      +Q+H   VK G+     +  +++ +Y R  N+   R +FD M   +V+S
Sbjct: 433 AFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVIS 492

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           W +++ GYA +      LE+F  M+  G++PN  TF +VL   +  G+ A
Sbjct: 493 WNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEA 542


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/670 (35%), Positives = 381/670 (56%), Gaps = 37/670 (5%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH  VIK G      V + L+++Y K  ++ +AR VFD +  R+ + W +++ GYV N  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
              A E F +M  +G+  +  T    +  C++ + + L +Q H+ ++K  I  D +I   
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L   YSK G ++ + K F    E KDV+SWT +IS    NG   + +  F +M  E V P
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGE-KDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180

Query: 381 NGFTYSIIL----TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N FT + +L    T Q +    QVH+   K  +E +  +  +L+  Y+K G +DEA  +F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240

Query: 437 ELIDEKDIVAWSAMLAGYAQIGD------------TEGAVKIYRQLTSEGVKPNEFTFSS 484
             ++ K+++ W+AM+AG+AQ  D            TE A+ +Y +L   G KP+ FT SS
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTE-ALGMYLKLNRSGRKPDLFTLSS 299

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++  C+   AA+EQG+Q HA +IK+   + + V +ALV MY K G+IE A + F     R
Sbjct: 300 ILTVCSRL-AALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
            L+SW SMI  +A+HG ++ AL++F++MR      + ITF+GV+ AC+HAG+VDE  +YF
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYF 418

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR---- 660
           +IM  E+ I P M+HY C+VD++ R G L++A D+I RM    +  +W  ++A CR    
Sbjct: 419 EIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN 478

Query: 661 ----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                     L+ L+P  +  YV+L NMY +   W++ + VR+LM + KV K   +S I 
Sbjct: 479 EELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRIS 538

Query: 711 VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP-DTSYVLQDIDDEHKEAILSQ 769
           +K + +SF   +  H  + ++++ L +L  R K  GY+  +   V+ D ++E +E   S 
Sbjct: 539 IKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSS 598

Query: 770 ---HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
              HSE+LA+ FGL+ TP GAP++++K++ +C DCH  +K++S    R I+++D  R H 
Sbjct: 599 AVYHSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHK 658

Query: 827 FKEGLCSCGD 836
           F  G CSC D
Sbjct: 659 FVNGQCSCAD 668



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 240/480 (50%), Gaps = 21/480 (4%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           VH   +K+G   +  V + LV++Y +   + + R+VFD++   NVV WT+L++GY +N  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
            +  +E+F  M   G  P++FT S  L   +    +    Q H  +IK      +S+ NA
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L S+Y K   +  +   F    ++D I+W ++++    N         F  M     E  
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             T  SV+ LC+T +   L  Q+HS   K G + +  I   L+  Y KCG +++A  +F+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDL-------------AVNFFCQMTREGVRPNGFTYS 386
            M E K++++W AMI+GH Q  A+DL             A+  + ++ R G +P+ FT S
Sbjct: 242 RM-EYKNLITWNAMIAGHAQ--AMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLS 298

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            ILT    ++      Q+HA  IK+ +     VGTAL++ Y K G ++ A K F  +  +
Sbjct: 299 SILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            +++W++M+  +A+ G ++ A++++  +   G +PN+ TF  V+ AC+      E  + F
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYF 418

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
                + K+   +     LV M+ + G ++ A +V KR   + +   W  +I G   HG+
Sbjct: 419 EIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN 478



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 223/471 (47%), Gaps = 36/471 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P+RN V +  L+  Y ++S  + A+ +F  +   G      TLS  L  C  L
Sbjct: 35  RKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSL 94

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q H   +K   + D ++  +L  LY +  +++   + F +  E +V+SWT+++
Sbjct: 95  ESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTII 154

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S    N      L LF  M  E ++PN FT ++VL + +        +QVH++  K G E
Sbjct: 155 SACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHE 214

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-----------TNEL 260
               + N+L+ +YLK   + +A+ +F+ ME ++ ITWN+M+AG+              + 
Sbjct: 215 SNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQT 274

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA   +  +  +G +    T  S++ +C+    L    Q+H+Q +K+G   D  + T 
Sbjct: 275 GTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTA 334

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y KCG +E A K F  M   + ++SWT+MI+   ++G    A+  F  M   G RP
Sbjct: 335 LVDMYDKCGSIERARKAFLDM-STRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRP 393

Query: 381 NGFTYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTA------LLNAYVKKG 427
           N  T+  +L A         A+  F++         +K + +         L++ +V+ G
Sbjct: 394 NQITFVGVLAACSHAGMVDEALEYFEI--------MQKEYKIKPVMDHYGCLVDMFVRLG 445

Query: 428 ILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
            LDEA  V + +D E +   W  ++AG    G+ E       QL    +KP
Sbjct: 446 RLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLK--LKP 494


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/726 (34%), Positives = 402/726 (55%), Gaps = 27/726 (3%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           N  +   C+  L  EA+  F  + ++ G  L  ST + ++  C  L     G+++H   +
Sbjct: 31  NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           KS    D+ +   ++++Y +  +++D ++VFD M E NVVSWTS+++GY++N      LE
Sbjct: 91  KSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN--GGEVVTSVCNALISM 223
            + +M   G+ P+ FTF +++   +  G +    Q+H  V+K+  G  ++    NALISM
Sbjct: 151 FYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQ--NALISM 208

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-T 282
           Y KS ++ DA  VF  M  RD I+W SM+AG+      +EA   F  M   G  L     
Sbjct: 209 YTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFI 268

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           F SV   C++  +    RQLH   +K G+  D      L   Y+KCG +  A  +F  + 
Sbjct: 269 FGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIG 328

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
              D+V+W A+I+G    G    A+ FF QM  +G+ P+  T   +L A  + S      
Sbjct: 329 R-PDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGM 387

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQI 457
           QVH +I K   +    V   LL  Y K   L +A   FE +    D+V+W+A+L    + 
Sbjct: 388 QVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRH 447

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
              E   ++ + +     +P+  T ++V+ A +A + ++E G Q H  ++K  LN    V
Sbjct: 448 DQAEEVFRLLKLMCISQHRPDYITLTNVLGA-SAETVSIEIGNQVHCYALKTGLNCDTSV 506

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           ++ L+ +Y+K G++++A ++F      D+VSW+S+I GYAQ G+ ++AL++FK MRR D+
Sbjct: 507 TNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDV 566

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + + +TF+GV+TAC+H GLV+EG + +  M  E  I PT EH SCMVDL +RAG L +A 
Sbjct: 567 KPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAE 626

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
             I++M F     VW+T+LAAC+              ++ + P +SA +VLL N+YA+ G
Sbjct: 627 GFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKG 686

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
           +W++ AR+R LM  R V+K  G SWIEVK++ + F   D  HP+ N+IY+ LEEL  ++ 
Sbjct: 687 NWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQML 746

Query: 744 DAGYKP 749
           DAGY P
Sbjct: 747 DAGYVP 752



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/550 (28%), Positives = 258/550 (46%), Gaps = 13/550 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  Q +FD  P+RN V +  ++  Y ++     AL  +  + + G+     T  S++K C
Sbjct: 115 KDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKAC 174

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L D   GRQ+H   +KS F   +    +L+ +Y ++N + D   VF  M   +++SW 
Sbjct: 175 SSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWG 234

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIK-PNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           S+++G+++       L  F  M  +G+  PN F F +V    +         Q+H M IK
Sbjct: 235 SMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIK 294

Query: 208 NG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            G G  V + C +L  MY K  ++  AR VF  +   D + WN+++AG+       EA  
Sbjct: 295 FGLGRDVFAGC-SLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIA 353

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M   G      T  S++  C +  EL    Q+H  + K G+D D  +   L+  Y+
Sbjct: 354 FFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYA 413

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC ++ DA   F  MR   D+VSW A+++  +++   +        M     RP+  T +
Sbjct: 414 KCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLT 473

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L A           QVH + +KT      SV   L++ Y K G L  A K+F+ +   
Sbjct: 474 NVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINP 533

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D+V+WS+++ GYAQ G  E A+K+++ +    VKPN  TF  V+ AC+      E  K +
Sbjct: 534 DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLY 593

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR--KRDLVSWNSMICGYAQHG 560
                +  +       S +V + ++ G +  A E F  Q     D+V W +++     HG
Sbjct: 594 GTMEKEFGIAPTREHCSCMVDLLARAGCLNEA-EGFIHQMAFDPDIVVWKTLLAACKTHG 652

Query: 561 HT---KKALE 567
           +    K+A E
Sbjct: 653 NVDVGKRAAE 662


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/576 (37%), Positives = 358/576 (62%), Gaps = 20/576 (3%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           S F+ +++LCA    +  A+  H + ++  +  D  +   L+ AYSKCG +E A ++F  
Sbjct: 64  SDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDG 123

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ----PAVS 396
           M E + +VSW  MI  + +N     A++ F +M  EG + + FT S +L+A      A+ 
Sbjct: 124 MLE-RSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALE 182

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             ++H   +KT+ + +  VGTALL+ Y K G++++A +VFE + +K  V WS+M+AGY Q
Sbjct: 183 CKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQ 242

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
             + E A+ +YR+     ++ N+FT SSVI AC+  +A +E GKQ HA   K+   + + 
Sbjct: 243 SKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE-GKQMHAVIRKSGFGSNVF 301

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V+S+ V MY+K G++  +  +F   +++++  WN++I G+A+H   K+ + +F++M++  
Sbjct: 302 VASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDG 361

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +  + +TF  +++ C H GLV+EG+++F +M   + + P + HYSCMVD+  RAG+L +A
Sbjct: 362 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 421

Query: 637 MDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
            ++I  +PF  +A++W ++LA+CR              L  L+P ++  +VLLSN+YAA 
Sbjct: 422 YELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAAN 481

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
             W+E A+ RKL+ D  VKK  G SWI++K+K + F  G+ SHP+  +I + L+ L   L
Sbjct: 482 KQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIEL 541

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           +  GYKP   + L D++   KE +L QHSE+LA+ FGL+  P G+ ++I+KNLR+C DCH
Sbjct: 542 RKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCH 601

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             +K  S   RR I+VRD NRFHHF +G CSCG++W
Sbjct: 602 EFMKAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 188/362 (51%), Gaps = 7/362 (1%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            +  H + ++     DV +S  L++ Y +   VE  R+VFD M E ++VSW +++  Y R
Sbjct: 82  AKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N+M    L++F  M+ EG K + FT S+VL             ++H + +K   ++   V
Sbjct: 142 NRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYV 201

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ +Y K  M+ DA  VF+ M+D+ S+TW+SMVAGYV ++ + EA   +        
Sbjct: 202 GTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSL 261

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  + T  SVI  C+    L   +Q+H+ + K+G   +  + +  +  Y+KCG + ++  
Sbjct: 262 EQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYI 321

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QP 393
           IFS ++E K++  W  +ISG  ++      +  F +M ++G+ PN  T+S +L+      
Sbjct: 322 IFSEVQE-KNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 380

Query: 394 AVSPFQVHAHIIKTNYEKSFSV--GTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAM 450
            V   +    +++T Y  S +V   + +++   + G+L EA ++ + I  E     W ++
Sbjct: 381 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSL 440

Query: 451 LA 452
           LA
Sbjct: 441 LA 442



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 144/271 (53%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ V +N ++  Y R+ +  EAL++F  +R  G      T+SSVL  CG  
Sbjct: 118 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGAN 177

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D +  +++HC  +K+    ++ V T+L+DLY +   + D  +VF+ M + + V+W+S++
Sbjct: 178 CDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMV 237

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY ++K  +  L L+ R Q   ++ N FT S+V+   ++   +    Q+H ++ K+G  
Sbjct: 238 AGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFG 297

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V ++ + MY K   +R++  +F  +++++   WN++++G+  +    E    F  M
Sbjct: 298 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKM 357

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQL 302
              G      TF S++ +C  T  +   R+ 
Sbjct: 358 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 388


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/664 (35%), Positives = 380/664 (57%), Gaps = 31/664 (4%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  + + G      + N L+ M  K   + +AR++FD ++ ++  +WN +++ Y     
Sbjct: 63  IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV-LKNGIDFDHNIRT 319
              A   F  M +     T  TF + +  C++  +L+  R++H+++    GI     + T
Sbjct: 123 PSTALHLFAKMDVPP---TAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDT 179

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG-AIDLAVNFFCQMTREGV 378
            +   Y+KCG +  A  +F  +   K+VVSW A+I+ + Q+G +   A++ F +M   GV
Sbjct: 180 AIFSMYAKCGDLSTAKSVFDRI-PAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGV 238

Query: 379 RPNGFTYSIILTAQPAVSPFQ-VHAHIIKTNYE---KSFSVGTALLNAYVKKGILDEAAK 434
           RP   T+  +L A   V+  + +HA I++T  +   +   V  ALLN Y K G L+ A  
Sbjct: 239 RPCRATFVGVLGACNDVTSLEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARD 298

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F  +  +D V+ + M+A +AQ G  + +++++R++  EG+  ++ TF+SVI AC+    
Sbjct: 299 IFRKMQRRDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSC-CG 357

Query: 495 AVEQGKQFHACSIKAKLNNALC-----VSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
           A+E GK+ H   ++  L    C     V +ALV+MY K G +E A  VFK    ++ VSW
Sbjct: 358 ALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSW 417

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           N+M+   A  G   +A    +    + +E D  +FI V+ AC+H+G+++    +F +M++
Sbjct: 418 NAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLS 477

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------- 661
           +  + P  E+Y CMVDL +R+G L  A +++N MPF+  A  WRT+L  CR+        
Sbjct: 478 DFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAA 537

Query: 662 ------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK-EAGYSWIEVKNK 714
                  +L+P ++A Y LLS++Y+ATG   E   +R  M +R ++K   G S IEV  +
Sbjct: 538 SAAEQAFNLEPQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGR 597

Query: 715 TYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERL 774
            + F+AGD SHPQ ++I  +L+ L+  LK AG+ P T  V+ D+  E KE IL+ HSE+L
Sbjct: 598 VHEFVAGDSSHPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKL 657

Query: 775 AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           A+AFGL++T +G PL ++KNLRVC DCH  IKLISKL  R I VRD NRFH F+ G CSC
Sbjct: 658 AVAFGLISTKSGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSC 717

Query: 835 GDYW 838
           GDYW
Sbjct: 718 GDYW 721



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 222/481 (46%), Gaps = 22/481 (4%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H +  ++G      ++  LV +  +  ++ + R +FD +   N+ SW  ++S YA    
Sbjct: 63  IHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGH 122

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN- 218
               L LF +M V    P + TF+T L   +  G +    ++H  +  + G   + + + 
Sbjct: 123 PSTALHLFAKMDV---PPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDT 179

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-TNELHMEAFETFNNMGLAGAE 277
           A+ SMY K   +  A++VFD +  ++ ++WN+++A Y  +   H +A + F  M   G  
Sbjct: 180 AIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVR 239

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF---DHNIRTGLMVAYSKCGKMEDA 334
             R+TFV V+  C     L    ++H+++++ G+ F   D  ++  L+  Y+KCG +E A
Sbjct: 240 PCRATFVGVLGACNDVTSL---EKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVA 296

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             IF  M+  +D VS   MI+   Q G    ++  F +M  EG+  +  T++ ++TA   
Sbjct: 297 RDIFRKMQR-RDQVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSC 355

Query: 395 VSPFQVHAHIIKTNYEKSFS---------VGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
               +    I K   E             V TAL++ Y K G L++A  VF+ +  K+ V
Sbjct: 356 CGALEFGKRIHKRVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSV 415

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+AMLA  A  G  + A    R    EGV+ +  +F SV+ AC+           F   
Sbjct: 416 SWNAMLAACAHQGQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLM 475

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKK 564
                L  A      +V + ++ G +  A E+        D ++W +++ G    G  + 
Sbjct: 476 LSDFDLVPAAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLEN 535

Query: 565 A 565
           A
Sbjct: 536 A 536



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 211/454 (46%), Gaps = 23/454 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FD    +N   +N ++  Y        AL+LF    ++ +P    T ++ L  C  L
Sbjct: 96  RSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFA---KMDVPPTAMTFATALSACSSL 152

Query: 92  FDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            D   GR++H     S G    V + T++  +Y +  ++   + VFD +   NVVSW +L
Sbjct: 153 GDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNAL 212

Query: 151 LSGYARN-KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ YA++   + + L+LF +M   G++P   TF  VLG   D   V +  ++H  +++ G
Sbjct: 213 IAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACND---VTSLEKIHARIVETG 269

Query: 210 GEV---VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            +       V NAL++MY K   +  AR +F  M+ RD ++ N M+A +    L  E+ +
Sbjct: 270 LQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKESIQ 329

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-----DHNIRTGL 321
            F  M L G     +TF SVI  C+    L   +++H +V++  +       +  + T L
Sbjct: 330 VFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETAL 389

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y KCG +E A  +F  M   K+ VSW AM++     G  D A  F      EGV  +
Sbjct: 390 VSMYGKCGTLEQAKAVFKAM-TTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELD 448

Query: 382 GFTYSIILTAQPAVSPFQV---HAHIIKTNYEKSFSVGT--ALLNAYVKKGILDEAAKVF 436
             ++  +L A       +V   H  ++ ++++   +      +++   + G L +A ++ 
Sbjct: 449 SASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELM 508

Query: 437 ELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
             +    D +AW  +L G    G  E A     Q
Sbjct: 509 NSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQ 542


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/578 (37%), Positives = 357/578 (61%), Gaps = 20/578 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            R+    +++LCA    +  A+  H ++++  ++ D  +   L+ AYSKCG +E A ++F
Sbjct: 60  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ----PA 394
             M E + +VSW  MI  + +N     A++ F +M  EG + + FT S +L+A      A
Sbjct: 120 DGMLE-RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDA 178

Query: 395 VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           +   ++H   +KT  + +  VGTALL+ Y K G++ +A +VFE + +K  V WS+M+AGY
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            Q  + E A+ +YR+     ++ N+FT SSVI AC+  +A +E GKQ HA   K+   + 
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE-GKQMHAVICKSGFGSN 297

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + V+S+ V MY+K G++  +  +F   ++++L  WN++I G+A+H   K+ + +F++M++
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  + +TF  +++ C H GLV+EG+++F +M   + + P + HYSCMVD+  RAG+L 
Sbjct: 358 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 417

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A ++I  +PF  +A++W ++LA+CR              L  L+P ++  +VLLSN+YA
Sbjct: 418 EAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 477

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           A   W+E A+ RKL+ D  VKK  G SWI++K+K ++F  G+  HP+  +I S L+ L  
Sbjct: 478 ANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVI 537

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           + +  GYKP   + L D++   KE +L QHSE+LA+ FGL+  P  +P++I+KNLR+C D
Sbjct: 538 KFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVD 597

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH  +K  S   RR I+VRD NRFHHF +G CSCGD+W
Sbjct: 598 CHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 176/322 (54%), Gaps = 6/322 (1%)

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           +L + A  G V  A   H  +I+   E   ++ N LI+ Y K   V  AR VFDGM +R 
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++WN+M+  Y  N +  EA + F  M   G + +  T  SV+  C    +    ++LH 
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
             +K  ID +  + T L+  Y+KCG ++DA ++F  M++ K  V+W++M++G++QN   +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD-KSSVTWSSMVAGYVQNKNYE 245

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALL 420
            A+  + +  R  +  N FT S ++ A   ++      Q+HA I K+ +  +  V ++ +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305

Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + Y K G L E+  +F  + EK++  W+ +++G+A+    +  + ++ ++  +G+ PNE 
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365

Query: 481 TFSSVINACTAPSAAVEQGKQF 502
           TFSS+++ C   +  VE+G++F
Sbjct: 366 TFSSLLSVC-GHTGLVEEGRRF 386



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 206/421 (48%), Gaps = 11/421 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            +  H + ++     DV +   L++ Y +   VE  R+VFD M E ++VSW +++  Y R
Sbjct: 80  AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N+M    L++F  M+ EG K + FT S+VL             ++H + +K   ++   V
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ +Y K  M++DA  VF+ M+D+ S+TW+SMVAGYV N+ + EA   +        
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  + T  SVI  C+    L   +Q+H+ + K+G   +  + +  +  Y+KCG + ++  
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QP 393
           IFS ++E K++  W  +ISG  ++      +  F +M ++G+ PN  T+S +L+      
Sbjct: 320 IFSEVQE-KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378

Query: 394 AVSPFQVHAHIIKTNYEKSFSV--GTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAM 450
            V   +    +++T Y  S +V   + +++   + G+L EA ++ + I  +     W ++
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438

Query: 451 LAG---YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           LA    Y  +   E A +   +L  E    N    S++  A        +  K    C +
Sbjct: 439 LASCRVYKNLELAEVAAEKLFELEPENAG-NHVLLSNIYAANKQWEEIAKSRKLLRDCDV 497

Query: 508 K 508
           K
Sbjct: 498 K 498



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 146/271 (53%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ V +N ++  Y R+ +  EAL++FL +R  G      T+SSVL  CG  
Sbjct: 116 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVN 175

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D +  +++HC  VK+    ++ V T+L+DLY +   ++D  +VF+ M + + V+W+S++
Sbjct: 176 CDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMV 235

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY +NK  +  L L+ R Q   ++ N FT S+V+   ++   +    Q+H ++ K+G  
Sbjct: 236 AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V ++ + MY K   +R++  +F  +++++   WN++++G+  +    E    F  M
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQL 302
              G      TF S++ +C  T  +   R+ 
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/624 (37%), Positives = 369/624 (59%), Gaps = 53/624 (8%)

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EAFE+F +   A   L    F ++++ C   K + L +QLHS +  +G   D  I   L+
Sbjct: 56  EAFESFLSEIWAEPRL----FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLL 111

Query: 323 VAYSKCGKMEDASKIFSMM----------------------------REMKD--VVSWTA 352
             YSK G+++ A  +F  M                             EM D  V +W A
Sbjct: 112 NLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNA 171

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
           M++G  +    + A+  F +M      P+ ++   +L     +       QVHA+++K  
Sbjct: 172 MVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCG 231

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +E +  VG +L + Y+K G + +  +V   + +  +VAW+ +++G AQ G  EG +  Y 
Sbjct: 232 FECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYC 291

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            +   G +P++ TF SVI++C+   A + QGKQ HA ++KA  ++ + V S+LV+MYS+ 
Sbjct: 292 MMKMAGFRPDKITFVSVISSCS-ELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRC 350

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G ++ + + F   ++RD+V W+SMI  Y  HG  ++A+++F EM +++L  + ITF+ ++
Sbjct: 351 GCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLL 410

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC+H GL D+G   FD+MV ++ +   ++HY+C+VDL  R+G LE+A  +I  MP  A 
Sbjct: 411 YACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKAD 470

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A +W+T+L+AC++              + + P DSA YVLL+N+Y++   WQ  + VR+ 
Sbjct: 471 AIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRA 530

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M D+ VKKE G SW+EVKN+ + F  GD  HP+  +I   LEEL++ +K  GY PDTS V
Sbjct: 531 MKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSV 590

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L D+D+E KE IL  HSE+LAIAF L+ TP G P++++KNLRVC DCH  IK IS++++ 
Sbjct: 591 LHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKL 650

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           +I+VRD++RFHHFK G CSCGDYW
Sbjct: 651 EIIVRDSSRFHHFKNGTCSCGDYW 674



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 194/415 (46%), Gaps = 31/415 (7%)

Query: 65  LFLGIRRLGLPL----FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFA---------- 110
           LF  + +  +PL     G  L S++ T GC  D       H   + S F           
Sbjct: 71  LFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISN--HLLNLYSKFGELQAAVALFD 128

Query: 111 ----RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
               R++     ++  Y+   N+E  + +FD+M + NV +W ++++G  + +MN+  L L
Sbjct: 129 RMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLL 188

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           F RM      P+ ++  +VL   A  G +    QVH  V+K G E    V  +L  MY+K
Sbjct: 189 FSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMK 248

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
           +  + D   V + M D   + WN++++G           + +  M +AG    + TFVSV
Sbjct: 249 AGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSV 308

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           I  C+    L   +Q+H++ +K G   + ++ + L+  YS+CG ++D+ K F   +E +D
Sbjct: 309 ISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKE-RD 367

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQ 399
           VV W++MI+ +  +G  + A+  F +M +E +  N  T+  +L A          +  F 
Sbjct: 368 VVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFD 427

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA-AKVFELIDEKDIVAWSAMLAG 453
           +   + K   +      T L++   + G L+EA A +  +  + D + W  +L+ 
Sbjct: 428 M--MVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSA 480



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 169/332 (50%), Gaps = 13/332 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++LFD  P RN   +N ++    +  +++EAL LF  +  L       +L SVL+ C  L
Sbjct: 155 KNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHL 214

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              + G+QVH   +K GF  ++ V  SL  +YM+  ++ DG RV + M + ++V+W +L+
Sbjct: 215 GALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLM 274

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG A+    + VL+ +  M++ G +P+  TF +V+   ++  I+    Q+H   +K G  
Sbjct: 275 SGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGAS 334

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              SV ++L+SMY +   ++D+   F   ++RD + W+SM+A Y  +    EA + FN M
Sbjct: 335 SEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEM 394

Query: 272 ---GLAGAELTRSTFVSVIKLCA----TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
               L G E+   TF+S++  C+      K L L   +   V K G+       T L+  
Sbjct: 395 EQENLPGNEI---TFLSLLYACSHCGLKDKGLGLFDMM---VKKYGLKARLQHYTCLVDL 448

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
             + G +E+A  +   M    D + W  ++S 
Sbjct: 449 LGRSGCLEEAEAMIRSMPVKADAIIWKTLLSA 480


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/655 (36%), Positives = 369/655 (56%), Gaps = 54/655 (8%)

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTK 294
           VFD +   +  TWN+++  + ++   ++    F  M         S TF  VIK      
Sbjct: 86  VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            L   + +H  V+K     D  I   L+  YS  G ++ A  +FS + E KD+VSW +MI
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVE-KDIVSWNSMI 204

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHA----HIIKTNYE 410
           SG +Q G+ + A+  F +M  E  RPN  T   +L+A       +       +I +   +
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID 264

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA------- 463
            +  +  A+L+ YVK G L++A ++F+ ++EKDIV+W+ M+ GYA++GD + A       
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVM 324

Query: 464 ------------------------VKIYRQLT-SEGVKPNEFTFSSVINACTAPSAAVEQ 498
                                   + I+R+L  ++  KPNE T +S + AC A   A++ 
Sbjct: 325 PREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC-AQLGAMDL 383

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G   H    K  +     ++++L+ MYSK G++E A EVF    +RD+  W++MI G A 
Sbjct: 384 GGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAM 443

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HGH + A+++F +M+   ++ + +TF  ++ AC+H+GLVDEG+ +F+ M   + + P  +
Sbjct: 444 HGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSK 503

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISL 664
           HY+CMVD+  RAG LE+A+++I +MP   SA+VW  +L AC              RL+  
Sbjct: 504 HYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLET 563

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
             ++   YVLLSN+YA  G W   +R+R+ M    ++KE G S IEV    + FL GD S
Sbjct: 564 DSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNS 623

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH-KEAILSQHSERLAIAFGLVAT 783
           HP S +IYSKL+E+  R+K  GY  D S++LQ +++E+ KE  L+ HSE+LAIA+GL+  
Sbjct: 624 HPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRM 683

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
               P++IVKNLRVCGDCH+V KLISKL  RDI++RD  RFHHF  G CSC DYW
Sbjct: 684 EPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 212/444 (47%), Gaps = 41/444 (9%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDL--YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +Q+H   +++G   D   +T L         ++++   +VFD +   N+ +W +L+  +A
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFA 106

Query: 156 RNKMNDRVLELFHRMQVEGIK-PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +    + L +F +M  E  + PNS+TF  V+    +   +     +H MV+K       
Sbjct: 107 SSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDL 166

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            + N+LI  Y     +  A  VF  + ++D ++WNSM++G+V      EA + F  M + 
Sbjct: 167 FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKME 226

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
            A   R T V V+  CA   +L   R     + +NGID +  +   ++  Y KCG +EDA
Sbjct: 227 NARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDA 286

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV---------------- 378
            ++F  M E KD+VSWT MI G+ + G  D A   F  M RE +                
Sbjct: 287 RRLFDKMEE-KDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKP 345

Query: 379 ----------------RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTA 418
                           +PN  T +  L A   +        +H +I K   + +F + T+
Sbjct: 346 KEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTS 405

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           L++ Y K G L++A +VF  ++ +D+  WSAM+AG A  G    A+ ++ ++    VKPN
Sbjct: 406 LIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPN 465

Query: 479 EFTFSSVINACTAPSAAVEQGKQF 502
             TF++++ AC+  S  V++G+ F
Sbjct: 466 AVTFTNLLCACSH-SGLVDEGRLF 488



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 217/488 (44%), Gaps = 52/488 (10%)

Query: 21  SLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS- 79
           +L SP        +FD+ P+ N   +N L+  +       + L +F+ +         S 
Sbjct: 73  ALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSY 132

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K    +   + G+ +H   +K+ F  D+ +S SL+  Y    +++    VF  +
Sbjct: 133 TFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKI 192

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E ++VSW S++SG+ +    +  L+LF RM++E  +PN  T   VL   A    +    
Sbjct: 193 VEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGR 252

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV--- 256
                + +NG ++   + NA++ MY+K   + DAR +FD ME++D ++W +M+ GY    
Sbjct: 253 WACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVG 312

Query: 257 ----------------------------TNELHMEAFETFNNMGL-AGAELTRSTFVSVI 287
                                        N    EA   F  + L    +    T  S +
Sbjct: 313 DYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTL 372

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
             CA    + L   +H  + K GI  + +I T L+  YSKCG +E A ++F  + E +DV
Sbjct: 373 AACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSV-ERRDV 431

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHI 404
             W+AMI+G   +G    A++ F +M    V+PN  T++ +L A      V   ++  + 
Sbjct: 432 FVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQ 491

Query: 405 IKTNY-----EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV----AWSAMLAGYA 455
           ++  Y      K ++    +L    + G L+EA    ELI++  IV     W A+L    
Sbjct: 492 MRPVYGVVPGSKHYACMVDILG---RAGCLEEAV---ELIEKMPIVPSASVWGALLGACR 545

Query: 456 QIGDTEGA 463
             G+ E A
Sbjct: 546 IYGNVELA 553



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 133/248 (53%), Gaps = 5/248 (2%)

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYV--KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
           Q+HAH+++T         T L  A        LD A KVF+ I   ++  W+ ++  +A 
Sbjct: 48  QLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFAS 107

Query: 457 IGDTEGAVKIYRQLTSEGVK-PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
                  + ++ Q+  E  + PN +TF  VI A T  S+ +  G+  H   +KA   + L
Sbjct: 108 SPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLL-AGQAIHGMVMKASFGSDL 166

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            +S++L+  YS  G+++SA  VF +  ++D+VSWNSMI G+ Q G  ++AL++FK M+ +
Sbjct: 167 FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKME 226

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
           +   + +T +GV++AC     ++ G+   D  +  + I   +   + M+D+Y + G LE 
Sbjct: 227 NARPNRVTMVGVLSACAKRIDLEFGRWACD-YIERNGIDINLILSNAMLDMYVKCGSLED 285

Query: 636 AMDIINRM 643
           A  + ++M
Sbjct: 286 ARRLFDKM 293


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/647 (36%), Positives = 368/647 (56%), Gaps = 29/647 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N ++  Y K   +  AR +FD +   D++++N++++GY        A   F  M   G E
Sbjct: 78  NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T   +I  C     + L +QLH   +  G D   ++    +  YSK G + +A  +
Sbjct: 138 VDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M E++D VSW +MI  + Q+     A+  + +M  +G + + FT + +L A  ++  
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD---EAAKVFELIDEKDIVAWSAM 450
                Q H  +IK  + ++  VG+ L++ Y K G  D   ++ KVF+ I   D+V W+ M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315

Query: 451 LAGYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++GY+   + +E AVK +RQ+   G +P++ +F  V +AC+  S+   Q KQ H  +IK+
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP-SQCKQIHGLAIKS 374

Query: 510 KL-NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            + +N + V++AL+++Y K GN++ A  VF R  + + VS+N MI GYAQHGH  +AL +
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           ++ M    +  + ITF+ V++AC H G VDEGQ+YF+ M     I P  EHYSCM+DL  
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RAG LE+A   I+ MP+   +  W  +L ACR              L+ +QP  +  YV+
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVM 554

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+NMYA    W+E A VRK M  ++++K+ G SWIEVK K + F+A D SHP   ++   
Sbjct: 555 LANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI---LSQHSERLAIAFGLVATPAGAPLQI 791
           LEE+  ++K  GY  D  + +   D+  +      L  HSE+LA+AFGL++T  G  L +
Sbjct: 615 LEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVV 674

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VKNLR+CGDCH  IK +S +  R+I+VRD  RFH FK+G CSCGDYW
Sbjct: 675 VKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/508 (27%), Positives = 256/508 (50%), Gaps = 27/508 (5%)

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTS---------LVDLY 123
           G  L    + S++ +   L +H     ++ +C +  +AR    ST          +V  Y
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFV--NLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAY 84

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
            + + +   R++FD++ + + VS+ +L+SGYA  +     + LF RM+  G + + FT S
Sbjct: 85  AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED- 242
            ++    D   V    Q+H   +  G +  +SV NA ++ Y K  ++R+A +VF GM++ 
Sbjct: 145 GLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL 202

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           RD ++WNSM+  Y  ++   +A   +  M   G ++   T  SV+    +   L   RQ 
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCG---KMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           H +++K G   + ++ +GL+  YSKCG    M D+ K+F  +    D+V W  MISG+  
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS-PDLVVWNTMISGYSM 321

Query: 360 NGAI-DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKS-F 413
           N  + + AV  F QM R G RP+  ++  + +A   +S      Q+H   IK++   +  
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           SV  AL++ Y K G L +A  VF+ + E + V+++ M+ GYAQ G    A+ +Y+++   
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           G+ PN+ TF +V++AC A    V++G++ F+      K+       S ++ +  + G +E
Sbjct: 442 GIAPNKITFVAVLSAC-AHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500

Query: 533 SASEVFKRQ-RKRDLVSWNSMICGYAQH 559
            A         K   V+W +++    +H
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 207/434 (47%), Gaps = 15/434 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  PQ + V YN L+  Y        A+ LF  +R+LG  + G TLS ++  C   
Sbjct: 94  RQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR 153

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
            D +  +Q+HC  V  GF    +V+ + V  Y +   + +   VF  M+E  + VSW S+
Sbjct: 154 VDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSM 211

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +  Y ++K   + L L+  M  +G K + FT ++VL  L     +    Q H  +IK G 
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271

Query: 211 EVVTSVCNALISMYLK---SKMVRDARAVFDGMEDRDSITWNSMVAGYVTN-ELHMEAFE 266
              + V + LI  Y K      + D+  VF  +   D + WN+M++GY  N EL  EA +
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVK 331

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAY 325
           +F  M   G      +FV V   C+        +Q+H   +K+ I  +  ++   L+  Y
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLY 391

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
            K G ++DA  +F  M E+ + VS+  MI G+ Q+G    A+  + +M   G+ PN  T+
Sbjct: 392 YKSGNLQDARWVFDRMPEL-NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITF 450

Query: 386 SIILTAQP---AVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID 440
             +L+A      V   Q + + +K  +  E      + +++   + G L+EA +  + + 
Sbjct: 451 VAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP 510

Query: 441 EK-DIVAWSAMLAG 453
            K   VAW+A+L  
Sbjct: 511 YKPGSVAWAALLGA 524



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 20/245 (8%)

Query: 26  FYSK--------KDQSLFDRSPQRNFVEYNRLLFEYC-RDSLHQEALNLFLGIRRLGLPL 76
           FYSK          + +F      + V +N ++  Y   + L +EA+  F  ++R+G   
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343

Query: 77  FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRV 135
              +   V   C  L      +Q+H   +KS    + ++V+ +L+ LY ++ N++D R V
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA----- 190
           FD M E N VS+  ++ GYA++      L L+ RM   GI PN  TF  VL   A     
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKV 463

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWN 249
           DEG         T  I+   E  +     +I +  ++  + +A    D M  +  S+ W 
Sbjct: 464 DEGQEYFNTMKETFKIEPEAEHYS----CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519

Query: 250 SMVAG 254
           +++  
Sbjct: 520 ALLGA 524



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 48/198 (24%)

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKG----------------------------- 529
           GK  HA  +K+ + ++  +S+  V +YSK G                             
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86

Query: 530 --NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
              I  A ++F    + D VS+N++I GYA    T  A+ +FK MR+   E DG T  G+
Sbjct: 87  DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPT---MEHYS----CMVDLYSRAGMLEKAMDII 640
           I AC     VD        ++ + H +      + YS      V  YS+ G+L +A+ + 
Sbjct: 147 IAACCDR--VD--------LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF 196

Query: 641 NRMPFAASATVWRTVLAA 658
             M        W +++ A
Sbjct: 197 YGMDELRDEVSWNSMIVA 214


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/610 (37%), Positives = 358/610 (58%), Gaps = 27/610 (4%)

Query: 251 MVAGYVTNELHMEAFETFNNMGLA-GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           M++G+V N    ++   F +M L  G     +T ++V+   A  +EL+L  Q+    +K 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           G     ++ TGL+  +SKCG++E A  +F  +R+ KD++S  AMISG   NG  + +V  
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRK-KDLISCNAMISGFTCNGETEDSVRL 119

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLNA 422
           F ++   G R    + S I+   P  SPF        +H   +K       SV TAL   
Sbjct: 120 FKELLSSGER---VSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTV 176

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y +   +  A ++F+   EK + +W+AM++G  Q G T+ A+ +++ +    V PN  T 
Sbjct: 177 YCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTV 236

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
           +S+++AC A   A+  G+  H+     +  + + VS+AL+ MY+K G+I  A E+F    
Sbjct: 237 TSILSAC-AQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMP 295

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           +++ V+WN+MI GY  HGH ++AL++F +M    ++  G+TF+ V+ AC+HAGLV EG  
Sbjct: 296 EKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDG 355

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--- 659
            F  MV++    P  EHY+CMVD+  RAG L+KA++ I  MP      VW  +L AC   
Sbjct: 356 IFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIH 415

Query: 660 -----------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                      +L  L P +   YVL+SN+Y+    + + A VR++   +++ K  G + 
Sbjct: 416 KDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTL 475

Query: 709 IEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILS 768
           IE+    + F +GD SHPQS  IY++L++L+ ++ +AG++ +T+ VL D+++E KE  + 
Sbjct: 476 IEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMK 535

Query: 769 QHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            HSE+LAIAFGL++T  GA ++I+KNLRVC DCH   K +SK+ +R IVVRD NRFHHFK
Sbjct: 536 VHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFK 595

Query: 829 EGLCSCGDYW 838
           +GLCSCGDYW
Sbjct: 596 DGLCSCGDYW 605



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 165/340 (48%), Gaps = 2/340 (0%)

Query: 53  YCRDSLHQEALNLFLGIRRLGLPLFG-STLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR 111
           + ++S  ++++ +F  +     P F  +T+ +VL     L +   G Q+ C  +K GF  
Sbjct: 5   FVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYS 64

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
            V++ T L+ L+ +   VE  R +F ++ + +++S  +++SG+  N   +  + LF  + 
Sbjct: 65  HVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELL 124

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
             G + +S T   ++ V +  G       +H   +K G    +SV  AL ++Y +   + 
Sbjct: 125 SSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMI 184

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
            AR +FD   ++   +WN+M++G   N L   A   F  M          T  S++  CA
Sbjct: 185 FARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACA 244

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
               L L   +HS +  N  + +  + T L+  Y+KCG +  A ++F +M E K+ V+W 
Sbjct: 245 QIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE-KNEVTWN 303

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           AMISG+  +G    A+  F  M    V+P G T+  +L A
Sbjct: 304 AMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYA 343



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 130/258 (50%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF    +++ +  N ++  +  +   ++++ LF  +   G  +  ST+  ++        
Sbjct: 88  LFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGH 147

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
                 +H  CVK G     +VST+L  +Y R N +   R++FD+  E  + SW +++SG
Sbjct: 148 SYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISG 207

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
             +N + D  + LF  MQ   + PN  T +++L   A  G ++    VH+++  N  E  
Sbjct: 208 CTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESN 267

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  ALI MY K   +  AR +FD M +++ +TWN+M++GY  +    EA + F +M  
Sbjct: 268 VYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLS 327

Query: 274 AGAELTRSTFVSVIKLCA 291
           +  + T  TF+SV+  C+
Sbjct: 328 SSVKPTGLTFLSVLYACS 345



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 6/243 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD S ++    +N ++    ++ L   A++LF  +++  +     T++S+L  C  +
Sbjct: 187 RQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQI 246

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G  VH     + F  +V VST+L+D+Y +  ++   R +FD M E N V+W +++
Sbjct: 247 GALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMI 306

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGG 210
           SGY  +      L+LF+ M    +KP   TF +VL   +  G+V     + HTMV   G 
Sbjct: 307 SGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGF 366

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYV----TNELHMEAF 265
           E +      ++ +  ++  ++ A      M  +     W +++   +    TN  H+ + 
Sbjct: 367 EPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASE 426

Query: 266 ETF 268
           + F
Sbjct: 427 KLF 429


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/659 (36%), Positives = 372/659 (56%), Gaps = 55/659 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL--TRSTFVSVIKLC 290
           AR VFD +   +S TWN+++  Y +    + +   F +M  + ++    + TF  +IK  
Sbjct: 84  ARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAA 143

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A    L L + LH   +K+ +  D  +   L+  Y  CG ++ A K+F+ ++E KDVVSW
Sbjct: 144 AEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE-KDVVSW 202

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
            +MI+G +Q G+ D A+  F +M  E V+ +  T   +L+A   +   +    V ++I +
Sbjct: 203 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEE 262

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
                + ++  A+L+ Y K G +++A ++F+ ++EKD V W+ ML GYA   D E A ++
Sbjct: 263 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 322

Query: 467 YRQLTSEGV--------------KPNE------------------FTFSSVINACTAPSA 494
              +  + +              KPNE                   T  S ++AC A   
Sbjct: 323 LNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSAC-AQVG 381

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A+E G+  H+   K  +     V+SAL+ MYSK G++E A EVF    KRD+  W++MI 
Sbjct: 382 ALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIG 441

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           G A HG   +A+++F +M+  +++ +G+TF  V  AC+H GLVDE +  F  M + + I 
Sbjct: 442 GLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIV 501

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------R 660
           P  +HY+C+VD+  R+G LEKA+  I  MP   S +VW  +L AC              R
Sbjct: 502 PEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTR 561

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L+ L+P +   +VLLSN+YA +G W   + +RK M    +KKE G S IE+    + FL+
Sbjct: 562 LLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLS 621

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH-KEAILSQHSERLAIAFG 779
           GD +HP S ++Y KL E+  +LK  GY+P+ S+VLQ I++E  KE  L+ HSE+LAI +G
Sbjct: 622 GDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYG 681

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L++T A   ++++KNLR+CGDCH V KLIS+L  R+I+VRD  RFHHF+ G CSC D+W
Sbjct: 682 LISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 223/492 (45%), Gaps = 56/492 (11%)

Query: 21  SLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS- 79
           S  S  Y++K   +FD  PQ N   +N L+  Y        ++  FL +       + + 
Sbjct: 77  SFASLEYARK---VFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNK 133

Query: 80  -TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
            T   ++K    +     G+ +H   +KS    DV V+ SL+  Y    +++   +VF  
Sbjct: 134 YTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTT 193

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           + E +VVSW S+++G+ +    D+ LELF +M+ E +K +  T   VL   A    +   
Sbjct: 194 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFG 253

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            +V + + +N   V  ++ NA++ MY K   + DA+ +FD ME++D++TW +M+ GY  +
Sbjct: 254 RRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 313

Query: 259 ELHMEAFETFNNM---------GLAGA-----------------------ELTRSTFVSV 286
           E +  A E  N M          L  A                       +L + T VS 
Sbjct: 314 EDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVST 373

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           +  CA    L L R +HS + KNGI  +  + + L+  YSKCG +E A ++F+ + E +D
Sbjct: 374 LSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSV-EKRD 432

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIK 406
           V  W+AMI G   +G    AV+ F +M    V+PNG T++ +  A          A  + 
Sbjct: 433 VFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD-EAESLF 491

Query: 407 TNYEKSFSV------GTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGD 459
              E S+ +         +++   + G L++A K  E +        W A+L        
Sbjct: 492 YKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL-------- 543

Query: 460 TEGAVKIYRQLT 471
             GA KI+  L+
Sbjct: 544 --GACKIHANLS 553



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 209/434 (48%), Gaps = 51/434 (11%)

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL--MVAYSK 327
           N      E +R T +S+I  C++ ++L+   Q H+ +++ G+  D    + L  + A S 
Sbjct: 22  NQPTTNNERSRHT-ISLIDRCSSLRQLK---QTHAHMIRTGMFSDPYSASKLFAIAALSS 77

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM--TREGVRPNGFTY 385
              +E A K+F  + +  +  +W  +I  +        ++  F  M  +     PN +T+
Sbjct: 78  FASLEYARKVFDEIPQ-PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTF 136

Query: 386 SIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             ++ A   VS   +    H   IK+       V  +L++ Y   G LD A KVF  I E
Sbjct: 137 PFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 196

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           KD+V+W++M+ G+ Q G  + A+++++++ SE VK +  T   V++AC A    +E G++
Sbjct: 197 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC-AKIRDLEFGRR 255

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA---- 557
             +   + ++N  L +++A++ MY+K G+IE A  +F    ++D V+W +M+ GYA    
Sbjct: 256 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 315

Query: 558 ---------------------------QHGHTKKALEVFKEMRRQ-DLEFDGITFIGVIT 589
                                      Q+G   +AL VF E++ Q +++ + IT +  ++
Sbjct: 316 YEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLS 375

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN----RMPF 645
           AC   G ++ G ++    + ++ I       S ++ +YS+ G LEKA ++ N    R  F
Sbjct: 376 ACAQVGALELG-RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVF 434

Query: 646 AASATVWRTVLAAC 659
             SA +    +  C
Sbjct: 435 VWSAMIGGLAMHGC 448


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/677 (34%), Positives = 388/677 (57%), Gaps = 26/677 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV--VSWTSLLSGY 154
           GR +H   +K+G    + V+ + ++LY +TN++     +FD +N+++   VSW SL++ +
Sbjct: 30  GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAF 89

Query: 155 ARNKMNDR---VLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++N  +      + LF RM +   + PN+ T + V    ++   V    Q H++ +K G 
Sbjct: 90  SQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGC 149

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V ++L++MY K+  V DAR +FD M +R++++W +M++GY ++++  +A E F  
Sbjct: 150 SGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFEL 209

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M             SV+    +   +   RQ+HS  +KNG+    ++   L+  Y+KCG 
Sbjct: 210 MRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGS 269

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA + F    + K+ ++W+AM++G+ Q G  D A+  F +M   GV P+ FT   ++ 
Sbjct: 270 LDDAVRTFEFSGD-KNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVIN 328

Query: 391 AQ----PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A       V   Q+H+   K  +     V +A+++ Y K G L +A K FE + + D+V 
Sbjct: 329 ACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVL 388

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W++++ GY Q GD EG + +Y ++  E V PNE T +SV+ AC++  AA++QGKQ HA  
Sbjct: 389 WTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSL-AALDQGKQMHARI 447

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           IK      + + SAL  MY+K G+++    +F R   RD++SWN+MI G +Q+GH  KAL
Sbjct: 448 IKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKAL 507

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           E+F++M  + ++ D +TF+ +++AC+H GLVD G +YF +M +E +I P +EHY+CMVD+
Sbjct: 508 ELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDI 567

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
            SRAG L +A + I          +WR +L AC              +L+ L   +S+ Y
Sbjct: 568 LSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAY 627

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VLLS++Y A G  +   RVR++M  R V KE G SWIE+K   + F+ GD  HPQ ++I 
Sbjct: 628 VLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIR 687

Query: 733 SKLEELSTRLKDAGYKP 749
            +LE L+  + D GY+P
Sbjct: 688 LELELLTKLMIDEGYQP 704



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 156/466 (33%), Positives = 261/466 (56%), Gaps = 9/466 (1%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL+ V      L D V G+Q H   VK+G + DV V +SL+++Y +T  V D R++FD M
Sbjct: 120 TLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRM 179

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E N VSW +++SGYA + + D+ +E+F  M+ E    N F  ++VL  L  +  V T  
Sbjct: 180 PERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGR 239

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH++ IKNG   + SV NAL++MY K   + DA   F+   D++SITW++MV GY    
Sbjct: 240 QVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGG 299

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              +A + FN M  +G   +  T V VI  C+    +   +Q+HS   K G      + +
Sbjct: 300 DSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLS 359

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            ++  Y+KCG + DA K F  +++  DVV WT++I+G++QNG  +  +N + +M  E V 
Sbjct: 360 AVVDMYAKCGSLADARKGFECVQQ-PDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVI 418

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN  T + +L A  +++      Q+HA IIK  ++    +G+AL   Y K G LD+   +
Sbjct: 419 PNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLI 478

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  +  +D+++W+AM++G +Q G    A++++ ++  EG+KP+  TF ++++AC+     
Sbjct: 479 FWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSH-MGL 537

Query: 496 VEQGKQFHACSIKAKLNNALCVS--SALVTMYSKKGNIESASEVFK 539
           V++G ++       + N A  V   + +V + S+ G +  A E  +
Sbjct: 538 VDRGWEYFKMMFD-EFNIAPMVEHYACMVDILSRAGKLNEAKEFIE 582



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 195/363 (53%), Gaps = 7/363 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFDR P+RN V +  ++  Y    +  +A+ +F  +RR         L+SVL     L
Sbjct: 173 RKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSA---L 229

Query: 92  FDHVF---GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
              VF   GRQVH   +K+G    V+V+ +LV +Y +  +++D  R F+   + N ++W+
Sbjct: 230 TSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWS 289

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++GYA+   +D+ L+LF++M   G+ P+ FT   V+   +D   V    Q+H+   K 
Sbjct: 290 AMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKL 349

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G  +   V +A++ MY K   + DAR  F+ ++  D + W S++ GYV N  +      +
Sbjct: 350 GFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLY 409

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M +        T  SV++ C++   L   +Q+H++++K G   +  I + L   Y+KC
Sbjct: 410 GKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKC 469

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++D   IF  M   +DV+SW AMISG  QNG  + A+  F +M  EG++P+  T+  +
Sbjct: 470 GSLDDGYLIFWRMPS-RDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNL 528

Query: 389 LTA 391
           L+A
Sbjct: 529 LSA 531



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 189/358 (52%), Gaps = 15/358 (4%)

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM-KDVV 348
           C   K +   R LH+++LK G      +    +  Y+K   +  A  +F  + +  KD V
Sbjct: 21  CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80

Query: 349 SWTAMISGHLQN---GAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSPF----QV 400
           SW ++I+   QN    +   A++ F +M R   V PN  T + + +A   +S      Q 
Sbjct: 81  SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H+  +KT       VG++LLN Y K G + +A K+F+ + E++ V+W+ M++GYA     
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           + AV+++  +  E    NEF  +SV++A T+    V  G+Q H+ +IK  L   + V++A
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTS-DVFVYTGRQVHSLAIKNGLLAIVSVANA 259

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LVTMY+K G+++ A   F+    ++ ++W++M+ GYAQ G + KAL++F +M    +   
Sbjct: 260 LVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPS 319

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKA 636
             T +GVI AC+    V EG+Q          +   ++ Y  S +VD+Y++ G L  A
Sbjct: 320 EFTLVGVINACSDLCAVVEGKQMHSFAFK---LGFGLQLYVLSAVVDMYAKCGSLADA 374


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 235/584 (40%), Positives = 345/584 (59%), Gaps = 26/584 (4%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T+ TF  +I  CA    L     +H +++ +G D D  + T L+  Y + G ++ A K+F
Sbjct: 77  TQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVF 136

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPA 394
              RE + +  W A+       G     ++ + QM   G+  + FTY+ +L A    + +
Sbjct: 137 DETRE-RTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELS 195

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           VSP Q    +HAHI++  YE +  V T LL+ Y K G +  A  VF  +  K+ V+WSAM
Sbjct: 196 VSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVK--PNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +A +A+      A+++++ +  E     PN  T  +V+ AC A  AA+EQGK  H   ++
Sbjct: 256 IACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQAC-AGLAALEQGKLIHGYILR 314

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L++ L V +AL+TMY + G I     VF   + RD+VSWNS+I  Y  HG  KKA+++
Sbjct: 315 RGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQI 374

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M  Q      I+FI V+ AC+HAGLV+EG+  F+ M++++ I+P MEHY+CMVDL  
Sbjct: 375 FENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 434

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RA  L++A+ +I  M F    TVW ++L +CR              L  L+P ++  YVL
Sbjct: 435 RANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVL 494

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+++YA    W E   V KL+  R ++K  G SWIEVK K YSF++ D  +PQ  +I++ 
Sbjct: 495 LADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHAL 554

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L +LS  +K  GY P T+ VL D+D+E KE I+  HSE+LA+AFGL+ T  G  ++I KN
Sbjct: 555 LVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKN 614

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR+C DCH V K ISK   R+I+VRD NRFHHFK+G+CSCGDYW
Sbjct: 615 LRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 153/301 (50%), Gaps = 7/301 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  VH   V SGF +D  ++T L+++Y    +++  R+VFD+  E  +  W +L    A 
Sbjct: 97  GLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAM 156

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ----VHTMVIKNGGEV 212
                 +L+L+ +M   GI  + FT++ VL       +  + +Q    +H  ++++G E 
Sbjct: 157 VGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEA 216

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V   L+ +Y K   V  A +VF  M  ++ ++W++M+A +  NE+ M+A E F  M 
Sbjct: 217 NIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMM 276

Query: 273 LAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           L   +   +  T V+V++ CA    L   + +H  +L+ G+D    +   L+  Y +CG+
Sbjct: 277 LEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGE 336

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +    ++F  M+  +DVVSW ++IS +  +G    A+  F  M  +G  P+  ++  +L 
Sbjct: 337 ILMGQRVFDNMKN-RDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLG 395

Query: 391 A 391
           A
Sbjct: 396 A 396



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 141/268 (52%), Gaps = 6/268 (2%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + +FD + +R    +N L          +E L+L++ +  +G+P    T + VLK C 
Sbjct: 131 RARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACV 190

Query: 90  CLFDHVF----GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
                V     G+++H   ++ G+  +++V T+L+D+Y +  +V     VF  M   N V
Sbjct: 191 VSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFV 250

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIK--PNSFTFSTVLGVLADEGIVATAVQVHT 203
           SW+++++ +A+N+M  + LELF  M +E     PNS T   VL   A    +     +H 
Sbjct: 251 SWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHG 310

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            +++ G + +  V NALI+MY +   +   + VFD M++RD ++WNS+++ Y  +    +
Sbjct: 311 YILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKK 370

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCA 291
           A + F NM   G+  +  +F++V+  C+
Sbjct: 371 AIQIFENMIHQGSSPSYISFITVLGACS 398



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 88/168 (52%), Gaps = 8/168 (4%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-----TLSSVLKT 87
           S+F   P +NFV ++ ++  + ++ +  +AL LF   + + L    S     T+ +VL+ 
Sbjct: 239 SVFCAMPTKNFVSWSAMIACFAKNEMPMKALELF---QLMMLEAHDSVPNSVTMVNVLQA 295

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  L     G+ +H   ++ G    + V  +L+ +Y R   +  G+RVFD+M   +VVSW
Sbjct: 296 CAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSW 355

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            SL+S Y  +    + +++F  M  +G  P+  +F TVLG  +  G+V
Sbjct: 356 NSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLV 403


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/703 (34%), Positives = 390/703 (55%), Gaps = 67/703 (9%)

Query: 201  VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
            +H + +KNG     +  N L+++Y+KS  +  AR +FD +  R++ TW  +++G+     
Sbjct: 311  LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 261  HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
                F+ F  M   GA   + T  S+ K C+    L+L + +H+ +L+NGID D  +   
Sbjct: 371  SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430

Query: 321  LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR----- 375
            ++  Y KC   E A ++F +M E  DVVSW  MIS +L+ G ++ +++ F ++       
Sbjct: 431  ILDLYLKCKVFEYAERVFELMNE-GDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVS 489

Query: 376  -----EGVRPNGF-------TYSII-LTAQPAVSPF-----------------QVHAHII 405
                 +G+   G+        Y ++    + +V  F                 Q+H  ++
Sbjct: 490  WNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVL 549

Query: 406  KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID----------------EKDIVAWSA 449
            K  + +   + ++L+  Y K G +D A+ V + +                 +  IV+W  
Sbjct: 550  KFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGL 609

Query: 450  MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            M++GY   G  E  +K +R +  E V  +  T +++I+AC A +  +E G+  HA + K 
Sbjct: 610  MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISAC-ANAGILEFGRHVHAYNHKI 668

Query: 510  KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
                   V S+L+ MYSK G+++ A  +F++  + ++V W SMI G A HG  K+A+ +F
Sbjct: 669  GHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLF 728

Query: 570  KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +EM  Q +  + +TF+GV+ AC HAGL++EG +YF +M + + I P +EH + MVDLY R
Sbjct: 729  EEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGR 788

Query: 630  AGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLL 675
            AG L +  + I     +   +VW++ L++CRL              + + P D   YVLL
Sbjct: 789  AGHLTETKNFIFENGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLL 848

Query: 676  SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
            SNM A+   W E ARVR LM+ R +KK+ G SWI++K++ ++F+ GD SHPQ  +IYS L
Sbjct: 849  SNMCASNHRWDEAARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYL 908

Query: 736  EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
            + L  RLK+ GY  D   V+QD+++E  E ++S HSE+LA+ FG++ T    P++I+KNL
Sbjct: 909  DILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNL 968

Query: 796  RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R+C DCH  IK  S+L  R+I++RD +RFHHFK G CSCGDYW
Sbjct: 969  RICTDCHNFIKYASQLLDREIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 282/589 (47%), Gaps = 73/589 (12%)

Query: 76  LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV 135
           LF ST+S+     G L         H   VK+G  + +N +  L+ LY++++N++  R++
Sbjct: 296 LFHSTISNGPPPLGTL---------HALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKL 346

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           FD++ + N  +WT L+SG++R   ++ V +LF  M+ +G  PN +T S++    + +  +
Sbjct: 347 FDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINL 406

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
                VH  +++NG +    + N+++ +YLK K+   A  VF+ M + D ++WN M++ Y
Sbjct: 407 QLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAY 466

Query: 256 -----VTNELHM--------------------------EAFETFNNMGLAGAELTRSTFV 284
                V   L M                          +A E    M   G E +  TF 
Sbjct: 467 LRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFS 526

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS----- 339
             + L ++   + L RQLH  VLK G   D  IR+ L+  Y KCG+M++AS +       
Sbjct: 527 IALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLD 586

Query: 340 ---------MMREMK-DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
                      +E+K  +VSW  M+SG++ NG  +  +  F  M RE V  +  T + I+
Sbjct: 587 FLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTII 646

Query: 390 T--AQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           +  A   +  F   VHA+  K  +     VG++L++ Y K G LD+A  +F   +E +IV
Sbjct: 647 SACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIV 706

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W++M++G A  G  + A+ ++ ++ ++G+ PNE TF  V+NAC   +  +E+G     C
Sbjct: 707 FWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNAC-CHAGLLEEG-----C 760

Query: 506 SIKAKLNNALCVS------SALVTMYSKKGNI-ESASEVFKRQRKRDLVSWNSMICGYAQ 558
                + +A C++      +++V +Y + G++ E+ + +F+         W S +     
Sbjct: 761 RYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLSSCRL 820

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           H + +    V  EM  Q    D   ++ +   C      DE  +   +M
Sbjct: 821 HKNVEMGKWV-SEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLM 868



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 184/407 (45%), Gaps = 48/407 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  PQRN   +  L+  + R    +    LF  +R  G      TLSS+ K C   
Sbjct: 344 RKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLD 403

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G+ VH   +++G   DV +  S++DLY++    E   RVF+ MNE +VVSW  ++
Sbjct: 404 INLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMI 463

Query: 152 SGYARNKMNDRVLELFHRMQ----------VEGIKPNSF--------------------- 180
           S Y R    ++ L++F R+           V+G+    +                     
Sbjct: 464 SAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVV 523

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV---- 236
           TFS  L + +   +V    Q+H MV+K G      + ++L+ MY K   + +A  V    
Sbjct: 524 TFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDV 583

Query: 237 -FDGMEDRDS-----------ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
             D +++ ++           ++W  MV+GYV N  + +  +TF  M      +   T  
Sbjct: 584 PLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVT 643

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           ++I  CA    L   R +H+   K G   D  + + L+  YSK G ++DA  IF    E 
Sbjct: 644 TIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNE- 702

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            ++V WT+MISG   +G    A+  F +M  +G+ PN  T+  +L A
Sbjct: 703 PNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNA 749



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 16/278 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K   +F R P ++ V +N ++    +    ++AL     +   G      T S  L   
Sbjct: 473 EKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILS 532

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-------- 140
             L     GRQ+H   +K GF RD  + +SLV++Y +   +++   V  D+         
Sbjct: 533 SSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGN 592

Query: 141 --------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
                   ++ +VSW  ++SGY  N   +  L+ F  M  E +  +  T +T++   A+ 
Sbjct: 593 AGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANA 652

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           GI+     VH    K G  +   V ++LI MY KS  + DA  +F    + + + W SM+
Sbjct: 653 GILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMI 712

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           +G   +    +A   F  M   G      TF+ V+  C
Sbjct: 713 SGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNAC 750



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 128/273 (46%), Gaps = 9/273 (3%)

Query: 44  VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
           V +  ++  Y  +  +++ L  F  + R  + +   T+++++  C       FGR VH  
Sbjct: 605 VSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAY 664

Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
             K G   D  V +SL+D+Y ++ +++D   +F   NE N+V WTS++SG A +    + 
Sbjct: 665 NHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQA 724

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV--CNALI 221
           + LF  M  +GI PN  TF  VL      G++    +   M +K+   +   V  C +++
Sbjct: 725 ICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRM-MKDAYCINPGVEHCTSMV 783

Query: 222 SMYLKSKMVRDARA-VFDGMEDRDSITWNSMVAGYVTNELH--MEAFETFNNMGLAGAEL 278
            +Y ++  + + +  +F+      +  W S ++   +  LH  +E  +  + M L  A  
Sbjct: 784 DLYGRAGHLTETKNFIFENGISHLTSVWKSFLS---SCRLHKNVEMGKWVSEMLLQVAPS 840

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
               +V +  +CA+      A ++ S + + GI
Sbjct: 841 DPGAYVLLSNMCASNHRWDEAARVRSLMHQRGI 873


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/638 (36%), Positives = 372/638 (58%), Gaps = 30/638 (4%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           +I+ Y ++  + DA  +FD M  RD ++WNSM+ G +       A   F+ M      ++
Sbjct: 49  MIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNV-IS 107

Query: 280 RSTFVS-VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            +T V+  +K        RL   +H +        D      ++  Y + G++E+  ++F
Sbjct: 108 WTTMVNGYLKFGRVELAQRLFLDMHVK--------DVAAWNAMVHGYFENGRVEEGVRLF 159

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M  ++DV+SWT+MI G   NG  + A+  F +M R GV P   T++ +L+A      F
Sbjct: 160 EEM-PVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEF 218

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               QVH H++K        +  +L+  Y     ++ A K+F     K++V W+A+L  Y
Sbjct: 219 NLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAY 278

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
                 + A++++  +T  G  PN+ TFS  + AC    A +++GK+ H  +IK  L   
Sbjct: 279 VWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEA-LDKGKEIHTMAIKLGLETD 337

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           + V ++LV MY++ GN+ SA  VF+   ++D+VSWNS+I G AQHG    AL  F +M R
Sbjct: 338 VFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIR 397

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           + ++ + ITF G+++AC+ +G++ +G+ +F+ +          +HY+CMVD+  R G L+
Sbjct: 398 RGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLD 457

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A +++  MP  A++ +W  +L+ACR              ++ L+P+ S+ YVLLSN+YA
Sbjct: 458 EAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYA 517

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           + G W + +R+R  M    + K+ G SW+ ++ K + FL+ D SHP S +IY KL+ L  
Sbjct: 518 SAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGK 577

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           +LK+ GY PD  + L D++DE KE +LS HSERLAIAFGLV+T  G+ + ++KNLRVCGD
Sbjct: 578 KLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGD 637

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH+VIKL+SK+  R IVVRD+ RFHHFK G+CSC DYW
Sbjct: 638 CHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 200/396 (50%), Gaps = 16/396 (4%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           ++++ T ++  Y R + + D  ++FD M+  +VVSW S++ G            LF  M 
Sbjct: 42  NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP 101

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHT-MVIKNGGEVVTSVCNALISMYLKSKMV 230
               + N  +++T++      G V  A ++   M +K+      +  NA++  Y ++  V
Sbjct: 102 ----EKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKD-----VAAWNAMVHGYFENGRV 152

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            +   +F+ M  RD I+W SM+ G   N    EA   F  M  +G E T STF  V+  C
Sbjct: 153 EEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSAC 212

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A   E  L  Q+H  V+K G  F   I   L+  Y+ C K+E A KIF+     K+VV W
Sbjct: 213 ANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLT-KNVVKW 271

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
           TA+++ ++ N     A+  F  MT+ G  PN  T+SI L A   +       ++H   IK
Sbjct: 272 TALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIK 331

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
              E    VG +L+  Y + G ++ A  VF  I+EKDIV+W++++ G AQ G    A+  
Sbjct: 332 LGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIF 391

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           + Q+   GV PNE TF+ +++AC+  S  + +G+ F
Sbjct: 392 FNQMIRRGVDPNEITFTGLLSACSR-SGMLLKGRCF 426



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 188/390 (48%), Gaps = 34/390 (8%)

Query: 31  DQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           DQ+  +FD+ P  N   Y +++  Y R+    +AL LF  +    +  + S +   L  C
Sbjct: 29  DQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLD-C 87

Query: 89  GCL------FDHV-----------------FGRQVHCECVKSGF----ARDVNVSTSLVD 121
           G L      FD +                 FGR    E  +  F     +DV    ++V 
Sbjct: 88  GNLGMATRLFDEMPEKNVISWTTMVNGYLKFGR---VELAQRLFLDMHVKDVAAWNAMVH 144

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
            Y     VE+G R+F++M   +V+SWTS++ G   N  ++  L +F +M   G++P   T
Sbjct: 145 GYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWST 204

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F+ VL   A+       VQVH  V+K G      +  +LI+ Y     +  A  +F+   
Sbjct: 205 FACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETL 264

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            ++ + W +++  YV N  H +A   F +M   GA   +STF   +K C   + L   ++
Sbjct: 265 TKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKE 324

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H+  +K G++ D  +   L+V Y++CG +  A  +F  + E KD+VSW ++I G  Q+G
Sbjct: 325 IHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINE-KDIVSWNSIIVGSAQHG 383

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
               A+ FF QM R GV PN  T++ +L+A
Sbjct: 384 FGLWALIFFNQMIRRGVDPNEITFTGLLSA 413



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 146/324 (45%), Gaps = 1/324 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF+  P R+ + +  ++     +   +EAL +F  + R G+    ST + VL  C    +
Sbjct: 158 LFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVE 217

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G QVH   VK G      +S SL+  Y     +E   ++F++    NVV WT+LL+ 
Sbjct: 218 FNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTA 277

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N  +   L +F  M   G  PN  TFS  L        +    ++HTM IK G E  
Sbjct: 278 YVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETD 337

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N+L+ MY +   V  A AVF  + ++D ++WNS++ G   +   + A   FN M  
Sbjct: 338 VFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIR 397

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKME 332
            G +    TF  ++  C+ +  L   R     + +   +         MV    +CGK++
Sbjct: 398 RGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLD 457

Query: 333 DASKIFSMMREMKDVVSWTAMISG 356
           +A ++   M    + + W A++S 
Sbjct: 458 EAEELVRYMPVKANSMIWLALLSA 481



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 113/242 (46%), Gaps = 11/242 (4%)

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           T ++  Y +   L +A K+F+ +  +D+V+W++M+ G    G+   A +++ ++  + V 
Sbjct: 47  TKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNV- 105

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
               ++++++N            + F    +K      +   +A+V  Y + G +E    
Sbjct: 106 ---ISWTTMVNGYLKFGRVELAQRLFLDMHVK-----DVAAWNAMVHGYFENGRVEEGVR 157

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F+    RD++SW SMI G   +G +++AL VFK+M R  +E    TF  V++AC +A  
Sbjct: 158 LFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVE 217

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
            + G Q    +V     +      S ++  Y+    +E A  I N      +   W  +L
Sbjct: 218 FNLGVQVHGHVVKLGCFFHEFISVS-LITFYANCMKIEHAHKIFNE-TLTKNVVKWTALL 275

Query: 657 AA 658
            A
Sbjct: 276 TA 277


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/581 (38%), Positives = 351/581 (60%), Gaps = 34/581 (5%)

Query: 273 LAGAELTR-STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
           L GA   R   +   I  C   + LR  RQ+H++++  G      + T L++ Y++CG +
Sbjct: 27  LPGAGAARFHDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGAL 86

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           EDA  +   M E ++VVSWTAMISG+ QN   D A   F  M R G+             
Sbjct: 87  EDARNVLDGMPE-RNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVK--------- 136

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                  QVHA  +KTN+E    VG++LL+ Y K   + EA +VF+++  +D+V+++A+L
Sbjct: 137 -------QVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAIL 189

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +GY Q+G  E A+ ++R L +EG++ N+ TF++++NA +  S+ ++ GKQ H   ++ +L
Sbjct: 190 SGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSS-MDYGKQVHGLILRREL 248

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
              + + ++L+ MYSK G +  +  VF    +R +VSWN+M+ GY +HG   + +++F+ 
Sbjct: 249 PFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRS 308

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M   +++ D +T + V++  +H GLVDEG   FD +V E       EHY C++DL  R+G
Sbjct: 309 MC-DEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSG 367

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
            L+KA+++I +MPF  +  +W ++L ACR              L+ ++P ++  YV+LSN
Sbjct: 368 QLQKALNLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSN 427

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YAA G W++  RVRKLM  + V KE G SW+ +    ++F + +  HP+   I +K++E
Sbjct: 428 IYAAAGMWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKE 487

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           +   +K AG+ PD S VL D+DDE KE +L  HSE+LAI FGL++TP+   +Q++KNLR+
Sbjct: 488 IYVAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRI 547

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH   K +SK+  R+I +RD NRFH   EG C+CGDYW
Sbjct: 548 CVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 588



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 154/295 (52%), Gaps = 22/295 (7%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GRQVH   V +G+   + ++T LV +Y R   +ED R V D M E NVVSWT+++SGY++
Sbjct: 54  GRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQ 113

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N+  D+  ELF  M   GI                        QVH   +K   E+   V
Sbjct: 114 NERPDQAWELFIMMLRAGIH--------------------QVKQVHAFAVKTNFELHMFV 153

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY KS+ +++AR VFD +  RD +++ ++++GY    L  EA + F  +   G 
Sbjct: 154 GSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGM 213

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +  + TF +++   +    +   +Q+H  +L+  + F   ++  L+  YSKCGK+  + +
Sbjct: 214 QCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRR 273

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +F  M E + VVSW AM+ G+ ++G     V  F  M  E V+P+  T   +L+ 
Sbjct: 274 VFDSMPE-RSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLLAVLSG 326



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 145/288 (50%), Gaps = 33/288 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++ D  P+RN V +  ++  Y ++    +A  LF+ + R G+                 
Sbjct: 90  RNVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQV-------------- 135

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 +QVH   VK+ F   + V +SL+D+Y ++ N+++ RRVFD +   +VVS+T++L
Sbjct: 136 ------KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAIL 189

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +  +++  L+LF  +  EG++ N  TF+ +L  L+    +    QVH ++++    
Sbjct: 190 SGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELP 249

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              ++ N+LI MY K   +  +R VFD M +R  ++WN+M+ GY  + L  E  + F +M
Sbjct: 250 FFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM 309

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID-FDHNIR 318
                          +K  + T    L+   H  ++  G+D FDH ++
Sbjct: 310 ------------CDEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVK 345


>gi|302788574|ref|XP_002976056.1| hypothetical protein SELMODRAFT_104474 [Selaginella moellendorffii]
 gi|300156332|gb|EFJ22961.1| hypothetical protein SELMODRAFT_104474 [Selaginella moellendorffii]
          Length = 665

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/667 (36%), Positives = 368/667 (55%), Gaps = 60/667 (8%)

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           + +ARAVF+ +E  +  +W+ ++   V N L   A E ++ M   G  L     ++++  
Sbjct: 1   MEEARAVFEKIEFPNIFSWSIIIGACVDNGLARRALELYHWMDHQGVRLDMVVLINLVSA 60

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C++   L   R L +++   G      +R  L+  Y K G + DA K F  M   + VVS
Sbjct: 61  CSSLGSLDHGRALEARITSMGFHLHPVVRNSLLNMYCKAGSVGDARKFFQDMAGDQSVVS 120

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----------QPAVSPFQ 399
           WTAMISG   +G  DLA++FF +M  EGVRPN  T+  IL A          + A+  F+
Sbjct: 121 WTAMISGFALHGREDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDQGLDEQALRLFR 180

Query: 400 V--------------------------------HAHIIKTNYEKSFSVGTALLNAYVKKG 427
           V                                H  I+    + S  V  +LLN Y K G
Sbjct: 181 VMDLEGHTPDEVTLVAALEACSNLNLLAAGKKLHELILDAGLDSSI-VRNSLLNMYGKCG 239

Query: 428 ILDEAAKVFELI-DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
            LDEA +VFE   D ++++ WS M+A Y+  GD   A+ +Y+++  EG+KP+E+TF+S++
Sbjct: 240 GLDEARRVFERCSDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLKPDEYTFTSLL 299

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           + C+    A+ +G+  H       L   + +++ALV MY + G +E A  VF++    +L
Sbjct: 300 DVCSIAGDALAEGRALHRRLEAKGLEKKMVLATALVNMYGRYGQLEDALRVFEKMNHWNL 359

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           V+W ++I  +AQHG    A+++   M  + ++ D I F+ V+ AC+HAG+++ G   F  
Sbjct: 360 VAWTALIAAFAQHGDVH-AIDLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGLSCFQE 418

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLIS--- 663
           MV +  +     HYSCMVDL +R G + +A ++++ MPF  +    +T+LAACR+     
Sbjct: 419 MVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAACRVSGDTP 478

Query: 664 -----------LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                      L PHD+A YVL+S+ YAA   W E A VR+ M    VKK  G+S +EVK
Sbjct: 479 RGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVRERMAKLGVKKPRGWSCVEVK 538

Query: 713 NKTYSFLAGDIS-HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           N+ + F AG+ S H ++ +I  +L  L   +K+ GY PDT  +   ++++ KE +L+ HS
Sbjct: 539 NRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEGGYVPDTGQIGHRLEEDDKEDLLALHS 598

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           ER+AIAFGL+  PAG P+ +VKNLRVC DCH V K+IS+   R IVVRD  RFH F+ G 
Sbjct: 599 ERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRIVVRDAYRFHRFENGT 658

Query: 832 CSCGDYW 838
           CSCGDYW
Sbjct: 659 CSCGDYW 665



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 44/404 (10%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ +++F++    N   ++ ++     + L + AL L+  +   G+ L    L +++  C
Sbjct: 2   EEARAVFEKIEFPNIFSWSIIIGACVDNGLARRALELYHWMDHQGVRLDMVVLINLVSAC 61

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVSW 147
             L     GR +       GF     V  SL+++Y +  +V D R+ F DM  + +VVSW
Sbjct: 62  SSLGSLDHGRALEARITSMGFHLHPVVRNSLLNMYCKAGSVGDARKFFQDMAGDQSVVSW 121

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA---DEG----------- 193
           T+++SG+A +   D  L+ F +M  EG++PN  TF ++LG  A   D+G           
Sbjct: 122 TAMISGFALHGREDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDQGLDEQALRLFRV 181

Query: 194 ------------------------IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
                                   ++A   ++H +++  G +  + V N+L++MY K   
Sbjct: 182 MDLEGHTPDEVTLVAALEACSNLNLLAAGKKLHELILDAGLD-SSIVRNSLLNMYGKCGG 240

Query: 230 VRDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
           + +AR VF+   D R+ ITW++M+A Y  N    +A   +  M L G +    TF S++ 
Sbjct: 241 LDEARRVFERCSDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLKPDEYTFTSLLD 300

Query: 289 LCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           +C+   + L   R LH ++   G++    + T L+  Y + G++EDA ++F  M    ++
Sbjct: 301 VCSIAGDALAEGRALHRRLEAKGLEKKMVLATALVNMYGRYGQLEDALRVFEKMNHW-NL 359

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           V+WTA+I+   Q+G +  A++   +M  EGV+ +   +  +L A
Sbjct: 360 VAWTALIAAFAQHGDVH-AIDLSWRMHLEGVQADDIVFLSVLHA 402



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 161/327 (49%), Gaps = 36/327 (11%)

Query: 57  SLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVS 116
            L ++AL LF  +   G      TL + L+ C  L     G+++H   + +G    + V 
Sbjct: 170 GLDEQALRLFRVMDLEGHTPDEVTLVAALEACSNLNLLAAGKKLHELILDAGLDSSI-VR 228

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNES-NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
            SL+++Y +   +++ RRVF+  ++  N+++W+++++ Y+ N    + L L+ +M +EG+
Sbjct: 229 NSLLNMYGKCGGLDEARRVFERCSDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGL 288

Query: 176 KPNSFTFSTVLGVLADEG-IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           KP+ +TF+++L V +  G  +A    +H  +   G E    +  AL++MY +   + DA 
Sbjct: 289 KPDEYTFTSLLDVCSIAGDALAEGRALHRRLEAKGLEKKMVLATALVNMYGRYGQLEDAL 348

Query: 235 AVFDGMEDRDSITWNSMVAGYVTN-ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
            VF+ M   + + W +++A +  + ++H  A +    M L G +     F+SV+  C+  
Sbjct: 349 RVFEKMNHWNLVAWTALIAAFAQHGDVH--AIDLSWRMHLEGVQADDIVFLSVLHACS-- 404

Query: 294 KELRLARQLHSQVLKNGIDF------DHNIRTG------LMVAYSKCGKMEDASKIFSMM 341
                    H+ VL+ G+        D  +R G      ++   ++CG++ +A ++   M
Sbjct: 405 ---------HAGVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSM 455

Query: 342 ------REMKDVVSWTAMISGHLQNGA 362
                  EMK +++    +SG    GA
Sbjct: 456 PFEPAHMEMKTLLA-ACRVSGDTPRGA 481



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 98/181 (54%), Gaps = 3/181 (1%)

Query: 32  QSLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           + +F+R S  RN + ++ ++  Y  +   ++AL+L+  +   GL     T +S+L  C  
Sbjct: 245 RRVFERCSDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLKPDEYTFTSLLDVCSI 304

Query: 91  LFDHVF-GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
             D +  GR +H      G  + + ++T+LV++Y R   +ED  RVF+ MN  N+V+WT+
Sbjct: 305 AGDALAEGRALHRRLEAKGLEKKMVLATALVNMYGRYGQLEDALRVFEKMNHWNLVAWTA 364

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L++ +A++  +   ++L  RM +EG++ +   F +VL   +  G++   +     ++ + 
Sbjct: 365 LIAAFAQHG-DVHAIDLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGLSCFQEMVADF 423

Query: 210 G 210
           G
Sbjct: 424 G 424


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/620 (36%), Positives = 357/620 (57%), Gaps = 46/620 (7%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR +FD + D++ + +N M+  YV N L+ +A   +  M   G      T+  V+K  + 
Sbjct: 73  ARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSR 132

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           +  L +  Q+H  VLK G+D +  +  GL+  Y KC  +++A ++   +   +DVVSW +
Sbjct: 133 SDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEI-PCRDVVSWNS 191

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           M+S + QNG  + A+    +M    ++PN  T + +L   PAV+          T  +  
Sbjct: 192 MVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLL---PAVT---------NTTSDNV 239

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                     YVK+        +F  + +K +++W+ M+A Y      + AV +Y Q+ +
Sbjct: 240 L---------YVKE--------MFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEA 282

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
            GV+P+  +  SV+ A     +A+  G++ H  + + KL   L + +AL+ MY+K G + 
Sbjct: 283 NGVEPDVVSIVSVLPA-YGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLR 341

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            A  VF + + RD+VSW S+I  Y + G  + A+ VF EMR   L  D I F+ V+ AC+
Sbjct: 342 DARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACS 401

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           HAGL+D+G+ YF++M  E  I P +EH++C+VDL  RAG +++A   I +MP      VW
Sbjct: 402 HAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVW 460

Query: 653 RTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
             +L+ACR              L+ L P  S  YVLLSN+YA  G W + A +R +M  +
Sbjct: 461 GPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERK 520

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI 758
            +KK  G S +E+ +  ++FLAGD SHPQS +IY +L+ L  ++K+ GY P+T   L D+
Sbjct: 521 GIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDV 580

Query: 759 DDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           ++E KE  L+ HSE+LA+AF ++ T  G P+++ KNLRVCGDCH   KLISK+  R+I++
Sbjct: 581 EEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIII 640

Query: 819 RDTNRFHHFKEGLCSCGDYW 838
           RDT+RFHHF+EG CSCGDYW
Sbjct: 641 RDTHRFHHFQEGCCSCGDYW 660



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 170/364 (46%), Gaps = 42/364 (11%)

Query: 300 RQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
           ++LH +VL +  + ++ ++   LM  Y+ CG+   A  IF  + + K+VV +  MI  ++
Sbjct: 38  KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITD-KNVVFFNVMIRSYV 96

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
            N     A+  +  M  +G  P+ +TY  +L A           Q+H  ++K   + +  
Sbjct: 97  NNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLY 156

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           VG  L+  Y K   L EA +V + I  +D+V+W++M++ YAQ G    A+++ R++ +  
Sbjct: 157 VGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALN 216

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +KPN+ T +S++ A T  ++                                   N+   
Sbjct: 217 LKPNDCTMASLLPAVTNTTS----------------------------------DNVLYV 242

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
            E+F +  K+ ++SWN MI  Y  +   K+A+ ++ +M    +E D ++ + V+ A    
Sbjct: 243 KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDL 302

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
             +  G++          + P +   + ++D+Y++ G L  A  + N+M F      W +
Sbjct: 303 SALSLGRRVHK-FAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQF-RDVVSWTS 360

Query: 655 VLAA 658
           +++A
Sbjct: 361 IISA 364



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 197/460 (42%), Gaps = 72/460 (15%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD    +N V +N ++  Y  + L+++AL ++  +   G      T   VLK       
Sbjct: 76  IFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDS 135

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H   +K G   ++ V   L+ +Y +  ++++ ++V D++   +VVSW S++S 
Sbjct: 136 LWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSV 195

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+N   +  LEL   M+   +KPN  T +++L  + +       + V  M +K   + V
Sbjct: 196 YAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNT-TSDNVLYVKEMFLKLTKKSV 254

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            S  N +I+MY+ + M ++A  ++  ME                                
Sbjct: 255 IS-WNVMIAMYVNNSMPKEAVVLYSQMEAN------------------------------ 283

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E    + VSV+        L L R++H    +  +  +  +   L+  Y+KCG + D
Sbjct: 284 -GVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRD 342

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F+ M + +DVVSWT++IS + + G    AV  F +M   G+ P+   +  +L A  
Sbjct: 343 ARAVFNQM-QFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACS 401

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA----WSA 449
                  HA                        G+LD+    F L+ E  I      ++ 
Sbjct: 402 -------HA------------------------GLLDDGRYYFNLMAECGITPKLEHFAC 430

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           ++    + G  + A    RQ+  E   P+E  +  +++AC
Sbjct: 431 VVDLLGRAGKIDEAYGFIRQMPLE---PDERVWGPLLSAC 467



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 3/208 (1%)

Query: 388 ILTAQPAVSPFQ-VHAHIIKTNYEK-SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           IL   P ++  + +H  ++   Y + + SVG  L+  Y   G    A  +F+ I +K++V
Sbjct: 27  ILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVV 86

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            ++ M+  Y      + A+ +Y+ + ++G  P+ +T+  V+ A ++ S ++  G Q H  
Sbjct: 87  FFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKA-SSRSDSLWVGLQIHGA 145

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            +K  L+  L V + L+ MY K  +++ A +V      RD+VSWNSM+  YAQ+G    A
Sbjct: 146 VLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDA 205

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTH 593
           LE+ +EM   +L+ +  T   ++ A T+
Sbjct: 206 LELCREMEALNLKPNDCTMASLLPAVTN 233



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 85/164 (51%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F +  +++ + +N ++  Y  +S+ +EA+ L+  +   G+     ++ SVL   G L
Sbjct: 243 KEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDL 302

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR+VH    +     ++ +  +L+D+Y +   + D R VF+ M   +VVSWTS++
Sbjct: 303 SALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSII 362

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           S Y +       + +F  M+  G+ P+S  F +VL   +  G++
Sbjct: 363 SAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLL 406


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/584 (40%), Positives = 346/584 (59%), Gaps = 26/584 (4%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T+ T   +I   A    L  A  +H  ++  G D D  + T L+  +S+   +++A K+F
Sbjct: 68  TQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVF 127

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA---- 394
              R+ + +  W A+       G  +  +  + +M   GV  + FTY+ +L A  A    
Sbjct: 128 DKTRK-RTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECL 186

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           VS  Q    +HAHI++  Y     V T L++ Y + G +  A+ VF+ +  K++V+WSAM
Sbjct: 187 VSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAM 246

Query: 451 LAGYAQIGDTEGAVKIYRQ--LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +A YA+ G    A++++R+  L +    PN  T  SV+ AC A  AA+EQGK  HA  ++
Sbjct: 247 IACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAA-FAALEQGKLIHAYILR 305

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L++ L V SAL+TMY++ G +ES   +F R  K+D+V WNS+I  Y  HG+ +KA+++
Sbjct: 306 RGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKI 365

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM         I+FI V+ AC+H GLV+EG++ F+ MV EH I P++EHY+CMVDL  
Sbjct: 366 FEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLG 425

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RA  L++A  II  +       VW ++L ACR              L  L+P ++  YVL
Sbjct: 426 RANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVL 485

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+++YA    W E  RV+KL++ R+++K  G SWIEV+ K YSF + D  +PQ  Q+++ 
Sbjct: 486 LADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHAL 545

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L  LS  +K  GY P T  VL D+D E KE I+  HSE+LA+AFGL+ T  G  ++I KN
Sbjct: 546 LVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKN 605

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR+C DCH+V K ISK   R+I+VRD NRFHHFK+G+CSCGDYW
Sbjct: 606 LRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 183/370 (49%), Gaps = 21/370 (5%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           VH   V  GF +D  ++T L++++   + V++ R+VFD   +  +  W +L    A    
Sbjct: 91  VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVA---TAVQVHTMVIKNGGEVVTS 215
            + VLEL+ RM + G+  + FT++ +L   +A E +V+      ++H  ++++G      
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V   L+ MY +   V  A AVFD M  ++ ++W++M+A Y  N    EA E F  M L  
Sbjct: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270

Query: 276 AELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            +   +  T VSV++ CA    L   + +H+ +L+ G+D    + + L+  Y++CGK+E 
Sbjct: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
              IF  M + KDVV W ++IS +  +G    A+  F +M   G  P+  ++  +L A  
Sbjct: 331 GQLIFDRMHK-KDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACS 389

Query: 392 -----QPAVSPFQ--VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKD 443
                +     F+  V  H I+ + E  ++    LL    +   LDEAAK+ E L  E  
Sbjct: 390 HTGLVEEGKKLFESMVKEHGIQPSVEH-YACMVDLLG---RANRLDEAAKIIEDLRIEPG 445

Query: 444 IVAWSAMLAG 453
              W ++L  
Sbjct: 446 PKVWGSLLGA 455



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 165/342 (48%), Gaps = 7/342 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           + +FD++ +R    +N L           + L L+  +  +G+     T + +LK C   
Sbjct: 124 RKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVAS 183

Query: 89  GCLFDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
            CL   +  G+++H   ++ G+   V+V T+L+D+Y R   V     VFD+M   NVVSW
Sbjct: 184 ECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSW 243

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIK--PNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +++++ YA+N      LELF  M +      PNS T  +VL   A    +     +H  +
Sbjct: 244 SAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYI 303

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           ++ G + +  V +ALI+MY +   +   + +FD M  +D + WNS+++ Y  +    +A 
Sbjct: 304 LRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAI 363

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGLMVA 324
           + F  M   G   +  +F+SV+  C+ T  +   ++L  S V ++GI         ++  
Sbjct: 364 KIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDL 423

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
             +  ++++A+KI   +R       W +++     +  ++LA
Sbjct: 424 LGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELA 465


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/642 (37%), Positives = 348/642 (54%), Gaps = 92/642 (14%)

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM--- 341
           +VIK CA    L+  +Q+H   L +G+  D  + + L+  Y +   ++DA  +F  +   
Sbjct: 79  TVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQP 138

Query: 342 ------------------REMKDV-------------VSWTAMISGHLQNGAIDLAVNFF 370
                             +E K++             VSW  MISG  ++G+   AV  F
Sbjct: 139 GVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMF 198

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAY 423
             M  EG++P+G + S +L   PAV          Q+H ++IK        V +AL++ Y
Sbjct: 199 QNMHLEGLKPDGTSVSSVL---PAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMY 255

Query: 424 VKKGILDEAAKVFELIDEKDI---------------------------------VAWSAM 450
            K     E + VF  +DE D+                                 V+W++M
Sbjct: 256 GKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSM 315

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +A  +Q G    A++++R++  EGVKPN  T   ++ AC    AA+  GK  H  S++  
Sbjct: 316 IASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPAC-GNIAALLHGKAAHCFSLRNG 374

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           + N + V SAL+ MY+K G + ++   F     R+LVSWNS++ GYA HG T +A+ +F+
Sbjct: 375 IFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFE 434

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
            M+R   + D ++F  V++ACT  GL +EG  YFD M   H +   MEHYSCMV L  R+
Sbjct: 435 LMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRS 494

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLS 676
           G LE+A  +I +MPF   + VW  +L++CR+                L+P +   Y+LLS
Sbjct: 495 GRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLS 554

Query: 677 NMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE 736
           N+YA+   W E   VR +M  R +KK  GYSWIE+KNK +  LAGD SHPQ  QI  KL 
Sbjct: 555 NIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLA 614

Query: 737 ELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
           +L+  +K +GY P T +VLQD++++ KE IL  HSE+LA+  GL+ T  G PLQ++KNLR
Sbjct: 615 KLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLR 674

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +C DCH VIK IS  E+R+I VRDTNRFH FK G+CSCGDYW
Sbjct: 675 ICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 199/448 (44%), Gaps = 77/448 (17%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
            L +V+KTC  L     G+Q+HC  + SG   D  V +SL+ +Y++ ++++D R VFD +
Sbjct: 76  VLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKL 135

Query: 140 N-----------------------------------ESNVVSWTSLLSGYARNKMNDRVL 164
                                               E N+VSW  ++SG+ R+      +
Sbjct: 136 PQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAV 195

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--------------- 209
            +F  M +EG+KP+  + S+VL  + D  +    +Q+H  VIK G               
Sbjct: 196 LMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMY 255

Query: 210 ----------------GEVVTSVCNALISMYLKSKMVRDARAV---FDGMEDRDSITWNS 250
                            EV    CNAL++   ++ +V +A  V   F GM D + ++W S
Sbjct: 256 GKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGM-DLNVVSWTS 314

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           M+A    N   MEA E F  M + G +    T   ++  C     L   +  H   L+NG
Sbjct: 315 MIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNG 374

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           I  D  + + L+  Y+KCG+M  +   F MM   +++VSW ++++G+  +G    A+N F
Sbjct: 375 IFNDVYVGSALIDMYAKCGRMLASRLCFDMMPN-RNLVSWNSLMAGYAMHGKTFEAINIF 433

Query: 371 CQMTREGVRPNGFTYSIILTA--QPAVSP---FQVHAHIIKTNYEKSFSVGTALLNAYVK 425
             M R G +P+  +++ +L+A  Q  ++    F   +       E      + ++    +
Sbjct: 434 ELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGR 493

Query: 426 KGILDEA-AKVFELIDEKDIVAWSAMLA 452
            G L+EA A + ++  E D   W A+L+
Sbjct: 494 SGRLEEAYAMIKQMPFEPDSCVWGALLS 521



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 204/463 (44%), Gaps = 72/463 (15%)

Query: 163 VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS 222
           V+ +F  M  +GI P+S    TV+   A    + T  Q+H   + +G  + + V ++L+ 
Sbjct: 58  VIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLH 117

Query: 223 MYLKSKMVRDARAVFDGM-----------------------------EDRD------SIT 247
           MY++   ++DAR VFD +                             + RD       ++
Sbjct: 118 MYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVS 177

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WN M++G+  +  +++A   F NM L G +   ++  SV+          +  Q+H  V+
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK---------------------- 345
           K G+  D  + + L+  Y KC    + S +F+ M E+                       
Sbjct: 238 KQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297

Query: 346 ----------DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
                     +VVSWT+MI+   QNG    A+  F +M  EGV+PN  T   +L A   +
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +        H   ++        VG+AL++ Y K G +  +   F+++  +++V+W++++
Sbjct: 358 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLM 417

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           AGYA  G T  A+ I+  +   G KP+  +F+ V++ACT      E    F + S    +
Sbjct: 418 AGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGV 477

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
              +   S +VT+  + G +E A  + K+   + D   W +++
Sbjct: 478 EARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALL 520



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 167/381 (43%), Gaps = 39/381 (10%)

Query: 20  KSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
           K  +  FY  +D  +     + N V +N ++  + R   + +A+ +F  +   GL   G+
Sbjct: 157 KETKELFYQTRDLGV-----ELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGT 211

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           ++SSVL   G L   + G Q+HC  +K G   D  V ++L+D+Y +     +   VF++M
Sbjct: 212 SVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEM 271

Query: 140 NES---------------------------------NVVSWTSLLSGYARNKMNDRVLEL 166
           +E                                  NVVSWTS+++  ++N  +   LEL
Sbjct: 272 DEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALEL 331

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           F  MQ+EG+KPNS T   +L    +   +      H   ++NG      V +ALI MY K
Sbjct: 332 FREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAK 391

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              +  +R  FD M +R+ ++WNS++AGY  +    EA   F  M   G +    +F  V
Sbjct: 392 CGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCV 451

Query: 287 IKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           +  C               + +N G++      + ++    + G++E+A  +   M    
Sbjct: 452 LSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEP 511

Query: 346 DVVSWTAMISGHLQNGAIDLA 366
           D   W A++S    +  +DL 
Sbjct: 512 DSCVWGALLSSCRVHNRVDLG 532



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/295 (21%), Positives = 114/295 (38%), Gaps = 73/295 (24%)

Query: 384 TYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
            +S  L +    S  Q HAHI+KT                     L E  ++F  ++   
Sbjct: 15  NFSHCLCSATKASLSQAHAHILKTGIS------------------LPETIQIFSKLNHFG 56

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
            V                  ++++  + ++G+ P+     +VI  C A S A++ GKQ H
Sbjct: 57  HV------------------IRVFSYMLTQGIVPDSRVLPTVIKTCAALS-ALQTGKQMH 97

Query: 504 ACSIKAKLN-------------------------------NALCVSSALVTMYSKKGNIE 532
             ++ + L                                  +  SSAL++ +++KG ++
Sbjct: 98  CFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVK 157

Query: 533 SASEVFKRQR----KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
              E+F + R    + +LVSWN MI G+ + G    A+ +F+ M  + L+ DG +   V+
Sbjct: 158 ETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVL 217

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            A     +   G Q     V +  + P     S ++D+Y +     +   + N M
Sbjct: 218 PAVGDLDMPLMGIQ-IHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEM 271


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/711 (34%), Positives = 370/711 (52%), Gaps = 92/711 (12%)

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVAGYVTNELHMEAFETFNNM- 271
           S   +L++    +  +RDA A FD +    RD++  N+M++ +    L   A   F+ + 
Sbjct: 93  SPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 152

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLAR--QLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           G         +F ++I        L      QLH  VLK+G     ++   L+  Y KC 
Sbjct: 153 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 212

Query: 330 KME---DASKIFSMMREMKDV------------------------------VSWTAMISG 356
             E   DA K+   M +  D+                              V W AMISG
Sbjct: 213 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 272

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK--TNY- 409
           ++Q+G    A   F +M  E V  + FT++ +L+A      F     VH  II+   N+ 
Sbjct: 273 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 332

Query: 410 -EKSFSVGTAL-------------------------------LNAYVKKGILDEAAKVFE 437
            E +  V  AL                               L+ Y+  G LD+A +VF+
Sbjct: 333 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK 392

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
           ++  K+ ++W  M++GY   G +E A+K++ Q+ +E VKP ++T++  I AC     A++
Sbjct: 393 VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC-GELGALK 451

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G+Q HA  ++     +    +AL+TMY+K G +  A  VF      D VSWN+MI    
Sbjct: 452 HGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALG 511

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
           QHGH ++ALE+F +M  + ++ D I+F+ ++TAC HAGLVDEG  YF+ M  +  I P  
Sbjct: 512 QHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGE 571

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LIS 663
           +HY+ ++DL  R+G + +A D+I  MPF  + ++W  +L+ CR              L  
Sbjct: 572 DHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFR 631

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           + P     Y+LLSN Y+A G W + ARVRKLM DR VKKE G SWIEV +K + FL GD 
Sbjct: 632 MIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDT 691

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
            HP++ ++Y  LE +  R++  GY PDT +VL D++   KE IL  HSE+LA+ FGL+  
Sbjct: 692 KHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKL 751

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           P GA + ++KNLR+CGDCHT +  +SK   R+IVVRD  RFHHFK+G CSC
Sbjct: 752 PPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 228/527 (43%), Gaps = 99/527 (18%)

Query: 33  SLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLF-----LGIRRLGLPLFGSTLSSVL 85
           + FD  P  +R+ V +N ++  + R SL   A+++F      G  R     F + +S+V 
Sbjct: 113 AFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVG 172

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE---DGRRVFDDMNES 142
           +       H    Q+HC  +KSG A  ++VS +L+ LYM+ +  E   D R+V D+M + 
Sbjct: 173 QMHNLAAPHC--TQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDK 230

Query: 143 NVVSWTS-------------------------------LLSGYARNKMNDRVLELFHRMQ 171
           + ++WT+                               ++SGY ++ M     ELF RM 
Sbjct: 231 DDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMV 290

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG----GEVVTSVCNALISMYLKS 227
            E +  + FTF++VL   A+ G       VH  +I+       E    V NAL+++Y K 
Sbjct: 291 SEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKG 350

Query: 228 KMVRDARAVFDGMEDRDSITWNS-------------------------------MVAGYV 256
             +  A+ +FD M  +D ++WN+                               MV+GYV
Sbjct: 351 GKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYV 410

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
              L  +A + FN M     +    T+   I  C     L+  RQLH+ +++ G +  ++
Sbjct: 411 HGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNS 470

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
               L+  Y+KCG + DA  +F +M  + D VSW AMIS   Q+G    A+  F QM  E
Sbjct: 471 AGNALLTMYAKCGAVNDARLVFLVMPNL-DSVSWNAMISALGQHGHGREALELFDQMVAE 529

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY------EKSFSVGTA------LLNAYV 424
           G+ P+  ++  ILTA         HA ++   +      ++ F +         L++   
Sbjct: 530 GIDPDRISFLTILTACN-------HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLG 582

Query: 425 KKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           + G + EA  + + +  E     W A+L+G    GD E       QL
Sbjct: 583 RSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQL 629



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 173/391 (44%), Gaps = 58/391 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F+    +  V +N ++  Y +  +  +A  LF  +    +PL   T +SVL  C   
Sbjct: 252 RSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANA 311

Query: 92  FDHVFGRQVHCECVK--SGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              V G+ VH + ++    F  +  + V+ +LV LY +   +   +R+FD MN  +VVSW
Sbjct: 312 GFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSW 371

Query: 148 TSLLSGY-------------------------------ARNKMNDRVLELFHRMQVEGIK 176
            ++LSGY                                   +++  L+LF++M+ E +K
Sbjct: 372 NTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVK 431

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P  +T++  +    + G +    Q+H  +++ G E   S  NAL++MY K   V DAR V
Sbjct: 432 PCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLV 491

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           F  M + DS++WN+M++    +    EA E F+ M   G +  R +F++++  C      
Sbjct: 492 FLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN----- 546

Query: 297 RLARQLHSQVLKNGIDF------DHNIRTG------LMVAYSKCGKMEDASKIFSMMREM 344
                 H+ ++  G  +      D  I  G      L+    + G++ +A  +   M   
Sbjct: 547 ------HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE 600

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
                W A++SG   NG ++       Q+ R
Sbjct: 601 PTPSIWEAILSGCRTNGDMEFGAYAADQLFR 631



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 4/232 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K   +F   P +N + +  ++  Y    L ++AL LF  +R   +     T +  +  CG
Sbjct: 386 KAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACG 445

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     GRQ+H   V+ GF    +   +L+ +Y +   V D R VF  M   + VSW +
Sbjct: 446 ELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNA 505

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++S   ++      LELF +M  EGI P+  +F T+L      G+V         + ++ 
Sbjct: 506 MISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF 565

Query: 210 GEVVTSVCNA-LISMYLKSKMVRDARAVFDGM--EDRDSITWNSMVAGYVTN 258
           G        A LI +  +S  + +AR +   M  E   SI W ++++G  TN
Sbjct: 566 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI-WEAILSGCRTN 616


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/669 (35%), Positives = 385/669 (57%), Gaps = 28/669 (4%)

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSI 246
           L + G    A Q+H + IK       SV + L+++Y   ++  ++ A ++FD +++   +
Sbjct: 22  LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           +WN ++  Y+ N+   +A   F  + L        T   V+K CA    L+  +Q+H  V
Sbjct: 82  SWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLV 140

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           LK G   D  + + L+  YSKCG++E   K+F  M E KDVVSW ++I G+ + G I+LA
Sbjct: 141 LKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRM-EDKDVVSWNSLIDGYARCGEIELA 199

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKK 426
           +  F +M  +    + F+++I++         +    +      ++     A++N Y+K 
Sbjct: 200 LEMFEEMPEK----DSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKA 255

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G  + A ++F+ + E+ +V W++M+ GY +      A+K++  +  E + PN   +++++
Sbjct: 256 GDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN---YTTIL 312

Query: 487 NACTAPSAAVE--QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
            A +A S  V    G+  H+  +K+       + + L+ MYSK G+++SA  VF+   K+
Sbjct: 313 GAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKK 372

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
            L  W S+I G   HG  ++ LE+F EM R  L+   ITFIGV+ AC+HAG  ++  +YF
Sbjct: 373 KLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYF 432

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR---- 660
            +M  ++ I P++EHY C++D+  RAG LE+A D I RMP  A+  +W ++L+  R    
Sbjct: 433 KMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGN 492

Query: 661 ----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                     LI L P  +  YV+LSNMYAA G W++  +VR++M  + +KK+ G S IE
Sbjct: 493 IRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIE 552

Query: 711 VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDI-DDEHKEAILSQ 769
            +   + F+ GD SHPQ+ +IY KL E+  +L  AG+ PDT+ VL  + +D  KEA L  
Sbjct: 553 HQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELET 612

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSERLAIAFGL+    G+P++I+KNLR+C DCH V KL+S +  R+I++RD +RFHHFK 
Sbjct: 613 HSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKS 672

Query: 830 GLCSCGDYW 838
           G CSC D+W
Sbjct: 673 GSCSCKDFW 681



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 250/501 (49%), Gaps = 30/501 (5%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYM--RTNNVEDG 132
           P     L   L+ CG   +     Q+H   +K+      +VS+ L+ LY   R NN++  
Sbjct: 12  PFLPPNLHFPLQNCGTERE---ANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYA 68

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
             +FD + E  +VSW  L+  Y  N+ ++  + LF ++  + + P+SFT   VL   A  
Sbjct: 69  HSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARL 127

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           G +    Q+H +V+K G  V   V ++L+SMY K   +   R VFD MED+D ++WNS++
Sbjct: 128 GALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLI 187

Query: 253 AGYV-TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV-LKNG 310
            GY    E+ + A E F  M     E    ++  +I   + + +L  AR +  ++ ++N 
Sbjct: 188 DGYARCGEIEL-ALEMFEEM----PEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNS 242

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
           + ++      ++  Y K G    A ++F  M E + +V+W +MI+G+ +N     A+  F
Sbjct: 243 VSWN-----AMINGYMKAGDSNTAKELFDQMPE-RSLVTWNSMITGYERNKQFTKALKLF 296

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAY 423
             M RE + PN   Y+ IL A  A S          VH++I+K+ ++    +GT L+  Y
Sbjct: 297 EVMLREDISPN---YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMY 353

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K G +  A +VF  I +K +  W++++ G    G  E  ++++ ++   G+KP+  TF 
Sbjct: 354 SKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFI 413

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR- 542
            V+NAC+    A +  + F   +    +  ++     L+ +  + G++E A +  +R   
Sbjct: 414 GVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPI 473

Query: 543 KRDLVSWNSMICGYAQHGHTK 563
           K + V W S++ G  +HG+ +
Sbjct: 474 KANKVIWTSLLSGSRKHGNIR 494



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 218/436 (50%), Gaps = 20/436 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            SLFD   +   V +N L+  Y  +    +A+ LF  +    +P    TL  VLK C  L
Sbjct: 69  HSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVP-DSFTLPCVLKGCARL 127

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +K GF  D  V +SLV +Y +   +E  R+VFD M + +VVSW SL+
Sbjct: 128 GALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLI 187

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT-MVIKNGG 210
            GYAR    +  LE+F  M     + +SF+++ ++  L+  G +  A  V   M I+N  
Sbjct: 188 DGYARCGEIELALEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRN-- 241

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              +   NA+I+ Y+K+     A+ +FD M +R  +TWNSM+ GY  N+   +A + F  
Sbjct: 242 ---SVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEV 298

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M         +T +  +   +    L   R +HS ++K+G   D  + T L+  YSKCG 
Sbjct: 299 MLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGS 358

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++ A ++F  + + K +  WT++I G   +G ++  +  F +M R G++P+  T+  +L 
Sbjct: 359 VKSALRVFRSIPK-KKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLN 417

Query: 391 AQPAVSPFQVHAH----IIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-D 443
           A      F   AH    ++  +Y  + S      L++   + G L+EA    E +  K +
Sbjct: 418 ACSHAG-FAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKAN 476

Query: 444 IVAWSAMLAGYAQIGD 459
            V W+++L+G  + G+
Sbjct: 477 KVIWTSLLSGSRKHGN 492



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 160/350 (45%), Gaps = 37/350 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-----LGLPLFGSTLSSVLK 86
           + +FDR   ++ V +N L+  Y R    + AL +F  +         + + G + S  L+
Sbjct: 169 RKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLE 228

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVS-TSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
               +FD +  R               +VS  ++++ YM+  +    + +FD M E ++V
Sbjct: 229 AARDVFDRMPIRN--------------SVSWNAMINGYMKAGDSNTAKELFDQMPERSLV 274

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG-VLADEGIVA--TAVQVH 202
           +W S+++GY RNK   + L+LF  M  E I PN   ++T+LG V A  G+V+  T   VH
Sbjct: 275 TWNSMITGYERNKQFTKALKLFEVMLREDISPN---YTTILGAVSAASGMVSLGTGRWVH 331

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           + ++K+G +    +   LI MY K   V+ A  VF  +  +    W S++ G   + L  
Sbjct: 332 SYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVE 391

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG-- 320
           +  E F+ M   G +    TF+ V+  C+       A   H       + +D+ I+    
Sbjct: 392 QTLELFDEMCRTGLKPHAITFIGVLNACSHAG---FAEDAHRYF--KMMTYDYGIKPSIE 446

Query: 321 ----LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               L+    + G +E+A      M    + V WT+++SG  ++G I + 
Sbjct: 447 HYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMG 496



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 117/231 (50%), Gaps = 6/231 (2%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLK 86
           S   + LFD+ P+R+ V +N ++  Y R+    +AL LF  + R  + P + + L +V  
Sbjct: 258 SNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSA 317

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
             G +     GR VH   VKSGF  D  + T L+++Y +  +V+   RVF  + +  +  
Sbjct: 318 ASG-MVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGH 376

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WTS++ G   + + ++ LELF  M   G+KP++ TF  VL   +  G    A +   M+ 
Sbjct: 377 WTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMT 436

Query: 207 KNGGEVVTSV--CNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAG 254
            + G +  S+     LI +  ++  + +A+   + M  + + + W S+++G
Sbjct: 437 YDYG-IKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSG 486


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/587 (37%), Positives = 352/587 (59%), Gaps = 24/587 (4%)

Query: 273 LAGAELTR-STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
           L GA   R   + + I  C   + LR  RQ+H++++  G      + T L++ Y++CG +
Sbjct: 27  LPGAGAARFHDYDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGAL 86

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           EDA  +   M E ++VVSWTAMISG+ QN     A + F  M R G  PN FT + +LT+
Sbjct: 87  EDAHNVLDGMPE-RNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTS 145

Query: 392 QPAVSPF------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
                        QVHA  IK N+E    VG++LL+ Y +   + EA +VF+++  +D+V
Sbjct: 146 CTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVV 205

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +++ +L+GY ++G  E A+ ++RQL +EG++ N+ TFS ++NA +  S+ ++ GKQ H  
Sbjct: 206 SYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSS-MDYGKQVHGL 264

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            ++ +L   + + ++L+ MYSK G +  +  VF    +R +VSWN+M+ GY +HG   + 
Sbjct: 265 ILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEV 324

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           +++F+ M  + ++ D +T + V+   +H GLVDEG   FD +V E       +HY C++D
Sbjct: 325 VQLFRFMCDK-VKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVID 383

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           L  R+G LEKA+ +I +MPF  +  +W ++L ACR              L  ++P ++  
Sbjct: 384 LLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGN 443

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YV+LSN+YAA   W++  R+RKLM  + V KE G SW+ +    ++F + +  HP+   I
Sbjct: 444 YVILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDI 503

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
             K+ E+   +K AG+ PD S VL D+DDE KE +L  HSE+LAI FGL++TP+   +Q+
Sbjct: 504 NVKINEIYAAIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQV 563

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLR+C DCH   K +SK+  R+I +RD NRFH   EG C+CGDYW
Sbjct: 564 MKNLRICVDCHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 160/295 (54%), Gaps = 4/295 (1%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GRQVH   V +G+   + ++T LV +Y R   +ED   V D M E NVVSWT+++SGY++
Sbjct: 54  GRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQ 113

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAV-QVHTMVIKNGGEVVT 214
           N+      +LF  M   G +PN FT ++VL      +GI    + QVH   IK   E+  
Sbjct: 114 NERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHM 173

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V ++L+ MY +S+ +++AR VFD +  RD +++ ++++GY    L  EA   F  +   
Sbjct: 174 FVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNE 233

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G +  + TF  ++   +    +   +Q+H  +L+  + F   ++  L+  YSKCGK+  +
Sbjct: 234 GMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYS 293

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            ++F  M E + VVSW AM+ G+ ++G     V  F  M  + V+P+  T   +L
Sbjct: 294 RRVFDNMPE-RSVVSWNAMLMGYGRHGMAYEVVQLFRFMC-DKVKPDSVTLLAVL 346



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 135/243 (55%), Gaps = 4/243 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC- 90
            ++ D  P+RN V +  ++  Y ++    EA +LF+ + R G      TL+SVL +C   
Sbjct: 90  HNVLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGS 149

Query: 91  --LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +  H   +QVH   +K  F   + V +SL+D+Y R+ N+++ RRVFD +   +VVS+T
Sbjct: 150 QGIHQHQI-KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYT 208

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++LSGY R  +++  L LF ++  EG++ N  TFS +L  L+    +    QVH ++++ 
Sbjct: 209 TILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRR 268

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
                 ++ N+LI MY K   +  +R VFD M +R  ++WN+M+ GY  + +  E  + F
Sbjct: 269 ELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLF 328

Query: 269 NNM 271
             M
Sbjct: 329 RFM 331


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/572 (38%), Positives = 342/572 (59%), Gaps = 21/572 (3%)

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           S I L    + +   RQ+H+ V+ NG   D  I   L+  Y++   ++DA  +F  +  M
Sbjct: 5   SCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL-TM 63

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV---- 400
           +D  +W+ M+ G  + G        F ++ R GV P+ +T   ++      +  Q+    
Sbjct: 64  RDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVI 123

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  ++K        V  +L++ Y K  ++++A ++FE +  KD+V W+ M+  YA     
Sbjct: 124 HDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY 183

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           E  V ++ ++  EGV P++    +V+NAC A   A+ + +  +   ++   +  + + +A
Sbjct: 184 ESLV-LFDRMREEGVVPDKVAMVTVVNAC-AKLGAMHRARFANDYIVRNGFSLDVILGTA 241

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           ++ MY+K G++ESA EVF R ++++++SW++MI  Y  HG  K A+++F  M    +  +
Sbjct: 242 MIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPN 301

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            +TF+ ++ AC+HAGL++EG ++F+ M  EH + P ++HY+CMVDL  RAG L++A+ +I
Sbjct: 302 RVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLI 361

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
             M       +W  +L ACR              L+ LQP +   YVLLSN+YA  G W+
Sbjct: 362 EAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWE 421

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + A+ R +M  RK+KK  G++WIEV NKTY F  GD SHPQS +IY  L  L  +L+ AG
Sbjct: 422 KVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAG 481

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PDT +VLQD+++E K+ +L  HSE+LAIAFGL+A P G P++I KNLRVCGDCHT  K
Sbjct: 482 YVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSK 541

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++S + RR I+VRD NRFHHF +G CSCGDYW
Sbjct: 542 MVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 162/307 (52%), Gaps = 7/307 (2%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH  V+ NG      + N L+  Y + K + DA ++FDG+  RDS TW+ MV G+    
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAG 80

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            H   + TF  +   G      T   VI+ C    +L++ R +H  VLK+G+  DH +  
Sbjct: 81  DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCA 140

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+KC  +EDA ++F  M   KD+V+WT MI  +    A +  V  F +M  EGV 
Sbjct: 141 SLVDMYAKCIVVEDAQRLFERMLS-KDLVTWTVMIGAYADCNAYESLV-LFDRMREEGVV 198

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+      ++ A   +         + +I++  +     +GTA+++ Y K G ++ A +V
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + EK++++WSAM+A Y   G  + A+ ++  + S  + PN  TF S++ AC+  +  
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACS-HAGL 317

Query: 496 VEQGKQF 502
           +E+G +F
Sbjct: 318 IEEGLRF 324



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 176/362 (48%), Gaps = 8/362 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQVH   V +G  +D+ ++  L+  Y +   ++D   +FD +   +  +W+ ++ G+A+ 
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
             +      F  +   G+ P+++T   V+    D   +     +H +V+K+G      VC
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            +L+ MY K  +V DA+ +F+ M  +D +TW  M+  Y     + E+   F+ M   G  
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMREEGVV 198

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             +   V+V+  CA    +  AR  +  +++NG   D  + T ++  Y+KCG +E A ++
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M+E K+V+SW+AMI+ +  +G    A++ F  M    + PN  T+  +L A      
Sbjct: 259 FDRMKE-KNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317

Query: 398 FQVHAHIIKTNYEK-----SFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAML 451
            +       + +E+          T +++   + G LDEA ++ E +  EKD   WSA+L
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377

Query: 452 AG 453
             
Sbjct: 378 GA 379



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 168/346 (48%), Gaps = 24/346 (6%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           SLFD    R+   ++ ++  + +   H      F  + R G+     TL  V++TC    
Sbjct: 56  SLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRT 115

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   GR +H   +K G   D  V  SLVD+Y +   VED +R+F+ M   ++V+WT ++ 
Sbjct: 116 DLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIG 175

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            YA     + ++ LF RM+ EG+ P+     TV+   A  G +  A   +  +++NG  +
Sbjct: 176 AYADCNAYESLV-LFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSL 234

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              +  A+I MY K   V  AR VFD M++++ I+W++M+A Y  +    +A + F+ M 
Sbjct: 235 DVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMML 294

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNIR------TG 320
                  R TFVS++  C+           H+ +++ G+ F      +H +R      T 
Sbjct: 295 SCAILPNRVTFVSLLYACS-----------HAGLIEEGLRFFNSMWEEHAVRPDVKHYTC 343

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           ++    + G++++A ++   M   KD   W+A++     +  ++LA
Sbjct: 344 MVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELA 389



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 41/324 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LF+R   ++ V +  ++  Y  D    E+L LF  +R  G+      + +V+  C  L
Sbjct: 156 QRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKL 214

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 R  +   V++GF+ DV + T+++D+Y +  +VE  R VFD M E NV+SW++++
Sbjct: 215 GAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMI 274

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGG 210
           + Y  +      ++LFH M    I PN  TF ++L   +  G++   ++  ++M  ++  
Sbjct: 275 AAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAV 334

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEAFETFN 269
                    ++ +  ++  + +A  + + M  ++D   W++++           A    +
Sbjct: 335 RPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG----------ACRIHS 384

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M LA             K   +  EL+     H  +L N               Y+K G
Sbjct: 385 KMELAE------------KAANSLLELQPQNPGHYVLLSN--------------IYAKAG 418

Query: 330 KMEDASKIFSMM--REMKDVVSWT 351
           K E  +K   MM  R++K +  WT
Sbjct: 419 KWEKVAKFRDMMTQRKLKKIPGWT 442


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/563 (41%), Positives = 320/563 (56%), Gaps = 47/563 (8%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L  +Y+  G+++ +  +F   +    V  WTA+I GH   G  + A+NF+ QM  +GV P
Sbjct: 15  LQRSYASLGRLDYSVALFGRTQN-PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 73

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNY------------------------------- 409
           N FT+S IL   P      +H+  +K  +                               
Sbjct: 74  NAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           EKS    TA+L  Y K G LD A  +F+ ++E+D V W+ M+ GY Q G    A+ ++R+
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +     KPNE T  SV++AC     A+E G+  H+      +   + V +ALV MYSK G
Sbjct: 194 MLKAKAKPNEVTVLSVLSAC-GQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
           ++E A  VF +   +D+V+WNSMI GYA  G +++AL++FK M R  L    ITFIG+++
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC H+G V EG   F+ M +E+ I P +EHY CMV+L  RAG +E+A +++  M      
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 372

Query: 650 TVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
            +W T+L ACR              L+     +S  Y+LLSN+YAA G+W   AR+R +M
Sbjct: 373 VLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMM 432

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
            D  VKKE G S IEV NK + FLAG ++HP+  +IY  LEE++  LK  GY P T  VL
Sbjct: 433 KDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVL 492

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
            DI +  KE  L  HSE+LAIAFGL+ T  G  ++IVKNLRVC DCH V KLISK+  R 
Sbjct: 493 HDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRK 552

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           IVVRD NRFHHF  G CSCGDYW
Sbjct: 553 IVVRDRNRFHHFVNGSCSCGDYW 575



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 184/390 (47%), Gaps = 48/390 (12%)

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
           A+F   ++     W +++ G+    LH +A   +  M   G E    TF S++KLC    
Sbjct: 30  ALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP--- 86

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM---------- 344
            +   + LHSQ +K G D D  +RTGL+  Y++ G +  A ++F  M E           
Sbjct: 87  -IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLT 145

Query: 345 --------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
                               +D V W  MI G+ QNG  + A+  F +M +   +PN  T
Sbjct: 146 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVT 205

Query: 385 YSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
              +L+A   +   +    VH++I     + +  VGTAL++ Y K G L++A  VF+ ID
Sbjct: 206 VLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 265

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           +KD+VAW++M+ GYA  G ++ A+++++ +   G+ P   TF  +++AC       E   
Sbjct: 266 DKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 325

Query: 501 QFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICG 555
            F+       I+ K+ +  C    +V +  + G++E A E+ K    + D V W +++  
Sbjct: 326 IFNKMKDEYGIEPKIEHYGC----MVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 381

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
              HG      ++ + +  Q+L   G T+I
Sbjct: 382 CRLHGKIALGEKIVELLVDQNLANSG-TYI 410



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 181/409 (44%), Gaps = 68/409 (16%)

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           +F      +V  WT+++ G+A   ++++ L  + +M  +G++PN+FTFS++L +   E  
Sbjct: 31  LFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPG 90

Query: 195 VATAVQVHTM--------------VIKNGGEVVTS-------------VCNALISMYLKS 227
            A   Q   +              V   GG+VV++                A+++ Y K 
Sbjct: 91  KALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKH 150

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
             +  AR +FDGME+RD + WN M+ GY  N +  EA   F  M  A A+    T +SV+
Sbjct: 151 GELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVL 210

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
             C     L   R +HS +  NGI F+ ++ T L+  YSKCG +EDA  +F  + + KDV
Sbjct: 211 SACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD-KDV 269

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---------------- 391
           V+W +MI G+   G    A+  F  M R G+ P   T+  IL+A                
Sbjct: 270 VAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNK 329

Query: 392 -------QPAVSPF--------------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
                  +P +  +              Q +  +   N E    +   LL A    G + 
Sbjct: 330 MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIA 389

Query: 431 EAAKVFELIDEKDIV---AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
              K+ EL+ ++++     +  +   YA +G+ +G  ++   +   GVK
Sbjct: 390 LGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVK 438



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 162/367 (44%), Gaps = 38/367 (10%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +LF R+   +   +  ++  +    LH++ALN +  +   G+     T SS+LK C    
Sbjct: 30  ALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPI-- 87

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS------ 146
               G+ +H + VK GF  D+ V T L+D+Y R  +V   +++FD M E ++VS      
Sbjct: 88  --EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLT 145

Query: 147 -------------------------WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                                    W  ++ GY +N M +  L LF RM     KPN  T
Sbjct: 146 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVT 205

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             +VL      G + +   VH+ +  NG +    V  AL+ MY K   + DAR VFD ++
Sbjct: 206 VLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKID 265

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           D+D + WNSM+ GY       EA + F +M   G   T  TF+ ++  C  +  +     
Sbjct: 266 DKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 325

Query: 302 LHSQVLKNGIDFDHNIR-TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           + ++ +K+    +  I   G MV    + G +E A ++   M    D V W  ++     
Sbjct: 326 IFNK-MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRL 384

Query: 360 NGAIDLA 366
           +G I L 
Sbjct: 385 HGKIALG 391


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/576 (39%), Positives = 348/576 (60%), Gaps = 26/576 (4%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG---LMVAYSKCGKMEDASKIFSM 340
           ++++  CA++K     RQ+H+  +++G+    N   G   +    S C  M  A +IFS 
Sbjct: 43  IALLLSCASSK--FKFRQIHAFSIRHGVPLT-NPDMGKYLIFTLLSFCSPMSYAHQIFSQ 99

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-- 398
           ++   ++ +W  MI G+ ++     A+  + QM    + P+  TY  +L A   +     
Sbjct: 100 IQN-PNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVRE 158

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             +VH+  I+  +E    V   L++ Y   G  + A K+FEL+ E+++V W++++ GYA 
Sbjct: 159 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 218

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G    A+ ++R++   GV+P+ FT  S+++AC A   A+  G++ H   +K  L+  L 
Sbjct: 219 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSAC-AELGALALGRRAHVYMVKVGLDGNLH 277

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
             +AL+ +Y+K G+I  A +VF    ++ +VSW S+I G A +G  K+ALE+FKE+ R+ 
Sbjct: 278 AGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKG 337

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           L    ITF+GV+ AC+H G+VDEG  YF  M  E+ I P +EHY CMVDL  RAG++++A
Sbjct: 338 LMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQA 397

Query: 637 MDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAAT 682
            + I  MP   +A VWRT+L AC              +L+ L+P  S  YVLLSN+YA+ 
Sbjct: 398 HEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASE 457

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
             W +  +VR+ M    VKK  G+S +E++N+ + F+ GD SHPQ+ +IY KL E++  L
Sbjct: 458 QRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLL 517

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           K  GY P  S VL DI++E KE  LS HSE++AIAF L+ T AG P+++VKNLRVC DCH
Sbjct: 518 KLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCH 577

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             IKLISK+  R+IVVRD +RFHHFK+G CSC DYW
Sbjct: 578 LAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 8/320 (2%)

Query: 79  STLSSVLKTC-----GCLFDHVFGRQVHCECVKSGFA-RDVNVSTSLV-DLYMRTNNVED 131
           S  S +LK C      C       RQ+H   ++ G    + ++   L+  L    + +  
Sbjct: 33  SPKSYILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSY 92

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
             ++F  +   N+ +W +++ GYA ++     LEL+ +M V  I+P++ T+  +L  +A 
Sbjct: 93  AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
              V    +VH++ I+NG E +  V N L+ MY        A  +F+ M +R+ +TWNS+
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           + GY  N    EA   F  MGL G E    T VS++  CA    L L R+ H  ++K G+
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 272

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
           D + +    L+  Y+KCG +  A K+F  M E K VVSWT++I G   NG    A+  F 
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEE-KSVVSWTSLIVGLAVNGFGKEALELFK 331

Query: 372 QMTREGVRPNGFTYSIILTA 391
           ++ R+G+ P+  T+  +L A
Sbjct: 332 ELERKGLMPSEITFVGVLYA 351



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 154/352 (43%), Gaps = 28/352 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
             +F +    N   +N ++  Y        AL L+  +    +     T   +LK    L
Sbjct: 94  HQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKL 153

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G +VH   +++GF   V V  +LV +Y    + E   ++F+ M E N+V+W S++
Sbjct: 154 MDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVI 213

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYA N   +  L LF  M + G++P+ FT  ++L   A+ G +A   + H  ++K G +
Sbjct: 214 NGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLD 273

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                 NAL+ +Y K   +R A  VFD ME++  ++W S++ G   N    EA E F  +
Sbjct: 274 GNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKEL 333

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT-----------G 320
              G   +  TFV V+  C+           H  ++  G D+   ++            G
Sbjct: 334 ERKGLMPSEITFVGVLYACS-----------HCGMVDEGFDYFKRMKEEYGIVPKIEHYG 382

Query: 321 LMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAM-----ISGHLQNGAIDLA 366
            MV    + G ++ A +    M    + V W  +     I GHL  G +  A
Sbjct: 383 CMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARA 434



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 8/233 (3%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSV 84
           +++    LF+   +RN V +N ++  Y  +    EAL LF  +G+R  G+   G T+ S+
Sbjct: 190 HAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR--GVEPDGFTMVSL 247

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L  C  L     GR+ H   VK G   +++   +L+DLY +  ++    +VFD+M E +V
Sbjct: 248 LSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSV 307

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSWTSL+ G A N      LELF  ++ +G+ P+  TF  VL   +  G+V         
Sbjct: 308 VSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKR 367

Query: 205 VIKNGGEVVTSV--CNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
           + +  G +V  +     ++ +  ++ +V+ A      M    +++ W +++  
Sbjct: 368 MKEEYG-IVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/693 (35%), Positives = 381/693 (54%), Gaps = 56/693 (8%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVT 257
           Q H  +I+ G        + L +M   S    +  AR VFD +   +S  WN+++  Y +
Sbjct: 48  QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107

Query: 258 NELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
               + +   F +M   +     + TF  +IK  A    L L + LH   +K+ +  D  
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +   L+  Y  CG ++ A K+F+ ++E KDVVSW +MI+G +Q G+ D A+  F +M  E
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKE-KDVVSWNSMINGFVQKGSPDKALELFKKMESE 226

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
            V+ +  T   +L+A   +       QV ++I +     + ++  A+L+ Y K G +++A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV--------------KPN 478
            ++F+ ++EKD V W+ ML GYA   D E A ++   +  + +              KPN
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346

Query: 479 E------------------FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           E                   T  S ++AC A   A+E G+  H+   K  +     V+SA
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSAC-AQVGALELGRWIHSYIKKHGIRMNFHVTSA 405

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+ MYSK G++E + EVF    KRD+  W++MI G A HG   +A+++F +M+  +++ +
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
           G+TF  V  AC+H GLVDE +  F  M + + I P  +HY+C+VD+  R+G LEKA+  I
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525

Query: 641 NRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQ 686
             MP   S +VW  +L AC              RL+ L+P +   +VLLSN+YA  G W+
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWE 585

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
             + +RK M    +KKE G S IE+    + FL+GD +HP S ++Y KL E+  +LK  G
Sbjct: 586 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645

Query: 747 YKPDTSYVLQDIDDEH-KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVI 805
           Y+P+ S VLQ I++E  KE  L+ HSE+LAI +GL++T A   ++++KNLRVCGDCH+V 
Sbjct: 646 YEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVA 705

Query: 806 KLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KLIS+L  R+I+VRD  RFHHF+ G CSC D+W
Sbjct: 706 KLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/493 (27%), Positives = 229/493 (46%), Gaps = 59/493 (11%)

Query: 21  SLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS- 79
           S  S  Y++K   +FD  P+ N   +N L+  Y        ++  FL +           
Sbjct: 76  SFASLEYARK---VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKY 132

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   ++K    +     G+ +H   VKS    DV V+ SL+  Y    +++   +VF  +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E +VVSW S+++G+ +    D+ LELF +M+ E +K +  T   VL   A    +    
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QV + + +N   V  ++ NA++ MY K   + DA+ +FD ME++D++TW +M+ GY  +E
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312

Query: 260 LHMEAFETFNNM---------GLAGA-----------------------ELTRSTFVSVI 287
            +  A E  N+M          L  A                       +L + T VS +
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
             CA    L L R +HS + K+GI  + ++ + L+  YSKCG +E + ++F+ + E +DV
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EKRDV 431

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHI 404
             W+AMI G   +G  + AV+ F +M    V+PNG T++ +  A      V   +   H 
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491

Query: 405 IKTNY-----EKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIG 458
           +++NY     EK ++    +++   + G L++A K  E +        W A+L       
Sbjct: 492 MESNYGIVPEEKHYA---CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL------- 541

Query: 459 DTEGAVKIYRQLT 471
              GA KI+  L 
Sbjct: 542 ---GACKIHANLN 551



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 214/446 (47%), Gaps = 42/446 (9%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTN--NVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +Q H   +++G   D   ++ L  +   ++  ++E  R+VFD++ + N  +W +L+  YA
Sbjct: 47  KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106

Query: 156 RNKMNDRVLEL--FHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
                D VL +  F  M  E    PN +TF  ++   A+   ++    +H M +K+    
Sbjct: 107 SGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V N+LI  Y     +  A  VF  ++++D ++WNSM+ G+V      +A E F  M 
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
               + +  T V V+  CA  + L   RQ+ S + +N ++ +  +   ++  Y+KCG +E
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284

Query: 333 DASKIFSMMRE------------------------------MKDVVSWTAMISGHLQNGA 362
           DA ++F  M E                               KD+V+W A+IS + QNG 
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344

Query: 363 IDLAVNFFCQMT-REGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGT 417
            + A+  F ++  ++ ++ N  T    L+A   V   +    +H++I K     +F V +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           AL++ Y K G L+++ +VF  ++++D+  WSAM+ G A  G    AV ++ ++    VKP
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFH 503
           N  TF++V  AC+      E    FH
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFH 490



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 210/443 (47%), Gaps = 49/443 (11%)

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L +     F+N         RS  +S+I+ C + ++L+   Q H  +++ G   D    +
Sbjct: 10  LSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSAS 66

Query: 320 GL--MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            L  M A S    +E A K+F  + +  +  +W  +I  +       L++  F  M  E 
Sbjct: 67  KLFAMAALSSFASLEYARKVFDEIPK-PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 125

Query: 378 -VRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
              PN +T+  ++ A   VS   +    H   +K+       V  +L++ Y   G LD A
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 185

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            KVF  I EKD+V+W++M+ G+ Q G  + A+++++++ SE VK +  T   V++AC A 
Sbjct: 186 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC-AK 244

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
              +E G+Q  +   + ++N  L +++A++ MY+K G+IE A  +F    ++D V+W +M
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304

Query: 553 ICGYA-------------------------------QHGHTKKALEVFKEMRRQ-DLEFD 580
           + GYA                               Q+G   +AL VF E++ Q +++ +
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            IT +  ++AC   G ++ G ++    + +H I       S ++ +YS+ G LEK+ ++ 
Sbjct: 365 QITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 423

Query: 641 N----RMPFAASATVWRTVLAAC 659
           N    R  F  SA +    +  C
Sbjct: 424 NSVEKRDVFVWSAMIGGLAMHGC 446



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 33/366 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F    +++ V +N ++  + +     +AL LF  +    +     T+  VL  C  + +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FGRQV     ++    ++ ++ +++D+Y +  ++ED +R+FD M E + V+WT++L G
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307

Query: 154 YA-------------------------------RNKMNDRVLELFHRMQVE-GIKPNSFT 181
           YA                               +N   +  L +FH +Q++  +K N  T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             + L   A  G +     +H+ + K+G  +   V +ALI MY K   +  +R VF+ +E
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            RD   W++M+ G   +    EA + F  M  A  +    TF +V   C+ T  +  A  
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487

Query: 302 LHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           L  Q+  N GI  +      ++    + G +E A K    M        W A++     +
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547

Query: 361 GAIDLA 366
             ++LA
Sbjct: 548 ANLNLA 553


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/572 (40%), Positives = 347/572 (60%), Gaps = 25/572 (4%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+K C    +L   +++H  VLK G ++D  +   L+  YS+ G + DA K+F  M   +
Sbjct: 3   VVKACG---DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDM-PAR 58

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVH 401
           D  SW AMISG+ QNG    A++   +M  EGV+ +  T + +L     V    S   +H
Sbjct: 59  DRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIH 118

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
            ++IK   E    V  AL+N Y K G L  A KVF L+  KD+V+W+ ++ GYAQ G   
Sbjct: 119 LYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLAS 177

Query: 462 GAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
            A+++Y  +   E + PN+ T+ S++ A  +   A++QG + H   IK  L + + V + 
Sbjct: 178 EAIEVYLLMEEHEEIIPNQGTWVSILPA-YSHVGALQQGMRIHGQVIKNCLYSDVFVGTC 236

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+ MY K G ++ A  +F +  +++ V WN+MI  Y  HG  +KALE+F+EM+ + ++ D
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPD 296

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            ITF+ +++AC+H+GLV + Q  F++M  E+ I P+++HY CMVDL+ RAG LE A + I
Sbjct: 297 HITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFI 356

Query: 641 NRMPFAASATVWRTVLAACRL---ISLQPHDS-----------AIYVLLSNMYAATGHWQ 686
            +MP    A+ W  +L ACR+   I L  H S             YVLLSN+YA  G W+
Sbjct: 357 KKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWE 416

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
               VR L  DR ++K  G+S I + NK   F  G+ +HP+  +IY +L +L++++K  G
Sbjct: 417 GVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIG 476

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PD  +VLQD++++ KE IL  HSERLAIA+G+++T    P++I KNLRVCGDCHTV K
Sbjct: 477 YVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTK 536

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            IS +  R+I+VRD++RFHHFK G CSCGDYW
Sbjct: 537 FISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 250/506 (49%), Gaps = 58/506 (11%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           V+K CG L D   G+++HC  +K GF  DV V+ SLV +Y R   V D R++FDDM   +
Sbjct: 3   VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
             SW +++SGY +N      L++   M++EG+K ++ T ++VL V A  G + +   +H 
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            VIK+G E    V NALI+MY K   +  A+ VF G+  +D ++WN+++ GY  N L  E
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASE 178

Query: 264 AFETFNNMGLAGAEL-TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           A E +  M      +  + T+VS++   +    L+   ++H QV+KN +  D  + T L+
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KCGK++DA  +F  +   K+ V W AMIS +  +G  + A+  F +M  E V+P+ 
Sbjct: 239 DMYGKCGKLDDAISLFYQVPR-KNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDH 297

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            T+                                +LL+A    G++ +A   F +++E+
Sbjct: 298 ITF-------------------------------VSLLSACSHSGLVSDAQWCFNMMEEE 326

Query: 443 -----DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
                 +  +  M+  + + G+ E A    +++    ++P+   + +++NAC      +E
Sbjct: 327 YGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP---IQPDASAWGALLNACRI-HGNIE 382

Query: 498 QGKQFHACSIKAKLNNALCVSSALVT-MYSKKGNIESASEVFKRQRKRDL---VSWNSMI 553
            GK  HA     ++++       L++ +Y+  G  E   +V    R R L     W+S+I
Sbjct: 383 LGK--HASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSII 440

Query: 554 CG------YAQHGHTKKALEVFKEMR 573
                   Y  +    K  E+++E+R
Sbjct: 441 LNNKVDVFYTGNQTHPKCEEIYRELR 466



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 175/342 (51%), Gaps = 13/342 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P R+   +N ++  YC++    EAL++   +R  G+ +   T++SVL  C  +
Sbjct: 49  RKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQV 108

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D + G+ +H   +K G   ++ VS +L+++Y +  ++   ++VF  + + +VVSW +L+
Sbjct: 109 GDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLI 167

Query: 152 SGYARNKMNDRVLELFHRMQV-EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           +GYA+N +    +E++  M+  E I PN  T+ ++L   +  G +   +++H  VIKN  
Sbjct: 168 TGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCL 227

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V   LI MY K   + DA ++F  +  ++S+ WN+M++ Y  +    +A E F  
Sbjct: 228 YSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFRE 287

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT-----GLMV-A 324
           M     +    TFVS++  C+ +  +  A     Q   N ++ ++ I+      G MV  
Sbjct: 288 MKAERVKPDHITFVSLLSACSHSGLVSDA-----QWCFNMMEEEYGIKPSLKHYGCMVDL 342

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           + + G++E A      M    D  +W A+++    +G I+L 
Sbjct: 343 FGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELG 384


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/767 (32%), Positives = 409/767 (53%), Gaps = 33/767 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR++H   ++SG+   + +S  L+ +Y R  +  D   + D M   N +SW +++   A+
Sbjct: 31  GRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANAQ 90

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                R L  F RM  +G  P++  F   L ++     +     V     K+G +    V
Sbjct: 91  AGDFPRSLLFFQRMLQDGSLPDAVVF---LSLIKAPRTIQEGEIVQEFAEKSGFDRSFVV 147

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             ALI MY +   +  A+  FD +++R  ++WN+++  Y   +   ++   F  M L G 
Sbjct: 148 GTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGI 207

Query: 277 ELTRSTFVSVIKLCA--TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                T + +    A    K       +HS  + +G+     +   ++  + + G +  A
Sbjct: 208 APNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRA 267

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
           + IF  M + +DV SW  MIS   QNG    A++ + +MT   +RP+G T+  +L A   
Sbjct: 268 NDIFEKM-DRRDVCSWNTMISAFAQNGHSSGALDLYGRMT---IRPDGVTFVNVLEACDC 323

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
               +    +H  +    Y+    V TAL++ Y + G LD AA+VF  I    ++  +A+
Sbjct: 324 PDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAI 383

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH----ACS 506
           +A +AQ G  +G++  +RQ+   G++P++FT  +V+ AC    AA   G+  H     C 
Sbjct: 384 IAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECP 443

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
                ++ L V +ALV MY+K G++++A  +F    + ++ +WN+++ GYAQHG+   A+
Sbjct: 444 GDCDPHDIL-VRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAV 502

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +  EM+   +  D I+F   ++A +HA  V++G + F  +  ++ + P++EHY  +VDL
Sbjct: 503 RLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDL 562

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIY 672
             RAG LE+A   +  M  AA A  W  +L ACR+              +++ P   A Y
Sbjct: 563 LGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASY 622

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
            +LSN+Y+A G W E   +R+ M++   +KE G SWIEVKN+ + F   D SHP++ +IY
Sbjct: 623 TVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIY 682

Query: 733 SKLEELSTRLK-DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
            +L+EL   LK +  Y PD   VL D++DEH+E +L  HSE+LA+ FGL+ T  G+ + I
Sbjct: 683 ERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITI 742

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLR+C DCH V+KL SK  +R+IVVRD  RFHHF  G CSC D W
Sbjct: 743 IKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 255/532 (47%), Gaps = 37/532 (6%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S+  + L DR P+RN + +N ++    +      +L  F  + + G         S++K 
Sbjct: 63  SRDAELLLDRMPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKA 122

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              + +   G  V     KSGF R   V T+L+ +Y R   ++  +  FD + E  VVSW
Sbjct: 123 PRTIQE---GEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSW 179

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF----STVLGVLADEGIVATAVQVHT 203
            +L++ Y+R    ++ L +F  M ++GI PN+ T     S V G+ A   I      +H+
Sbjct: 180 NALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAK--ITTCGNLIHS 237

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
             I +G   VT+V N++I+++ +   +  A  +F+ M+ RD  +WN+M++ +  N     
Sbjct: 238 CSIDSGLISVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSG 297

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A + +  M +    +   TFV+V++ C    +L     +H  V  +G D D  + T L+ 
Sbjct: 298 ALDLYGRMTIRPDGV---TFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVS 354

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y +CG+++ A+++F+ ++    V++  A+I+ H Q G  D ++  F QM + G+RP+ F
Sbjct: 355 MYRRCGRLDRAAEVFAAIQH-PGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKF 413

Query: 384 TYSIILTAQP----------------AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           T   +L A                  A  P     H I         V  AL+N Y K G
Sbjct: 414 TLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDIL--------VRNALVNMYAKCG 465

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            LD A  +F+   + ++  W+A++AGYAQ G    AV++  ++   G+ P+  +F++ ++
Sbjct: 466 DLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALS 525

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           A +      +  + F+A S    L  ++    A+V +  + G +E A    +
Sbjct: 526 ASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLR 577



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 12/155 (7%)

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           S ++EQG++ H   I++   + L +S+ L+ MY++  +   A  +  R  +R+ +SWN++
Sbjct: 25  STSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAV 84

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I   AQ G   ++L  F+ M +     D + F+ +I A      + EG+     +V E  
Sbjct: 85  IRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKA---PRTIQEGE-----IVQEFA 136

Query: 613 IYPTMEHY----SCMVDLYSRAGMLEKAMDIINRM 643
                +      + ++ +Y R G L++A D  +R+
Sbjct: 137 EKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRI 171


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/707 (33%), Positives = 387/707 (54%), Gaps = 21/707 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P R+ V +  ++  +       +AL++F  + + G+   G TL+SVLK C     
Sbjct: 107 VFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSH 166

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             F  QVH + VK     D  V +SLV+ Y     ++    V   + E + VSW +LL+G
Sbjct: 167 SKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNG 226

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YAR+    RV+ +  ++   G + + +T  TVL    + G+      VH  VIK G E  
Sbjct: 227 YARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETD 286

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + + L+ MY +     +A  VF  +++ D +  ++M++ +  +++  EA + F  M  
Sbjct: 287 NVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSG 346

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +     FV +  + + T +  L R +H+ ++K+G      +   ++  Y K G ++D
Sbjct: 347 MGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQD 406

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A+  F ++ E  D  SW  ++S        +  +  F QM  EG   N +TY  +L    
Sbjct: 407 ATVTFDLIHE-PDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCT 465

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           ++       QVHA I+K+  +    V   L++ Y + G    A  VFE + E+D  +W+ 
Sbjct: 466 SLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTV 525

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +++GYA+  + E  V+ +R +  E ++P++ T +  ++ C+   A++  G Q H+ +IK+
Sbjct: 526 IMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCS-DMASLGSGLQLHSWAIKS 584

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             N+++ VS ALV MY K GNI  A  +F     RD V+WN++ICGY+QHGH  KAL+ F
Sbjct: 585 GWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAF 643

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           K+M  +    DGITF+GV++AC+HAGL++EG++YF  + + + I PTMEHY+CMVD+ S+
Sbjct: 644 KQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSK 703

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLL 675
           AG L +A  +IN+MP A  +++WRT+L AC              RL  L+PHD++  +LL
Sbjct: 704 AGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILL 763

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
           SN+YA  G W +  RVR ++ D  VKKE G SWIE+  + + FL+ D
Sbjct: 764 SNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 162/568 (28%), Positives = 289/568 (50%), Gaps = 17/568 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+++H   ++S    D  +  SL+++Y +   + D RRVFD M   ++V+WT+++S +  
Sbjct: 69  GQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTA 128

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
              +D+ L++F RM  EGI PN FT ++VL   +         QVH  V+K  G     V
Sbjct: 129 AGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYV 188

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+  Y     +  A  V  G+ +R  ++WN+++ GY  +  +         +  +G 
Sbjct: 189 GSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGD 248

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E+++ T  +V+K C      +  + +H+ V+K G++ D+ + + L+  YS+C   E+A +
Sbjct: 249 EISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYE 308

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  + E  DVV  +AMIS   ++     A++ F +M+  GV+PN + +  I        
Sbjct: 309 VFIRIDE-PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTG 367

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                  VHA+I+K+ +     VG A+LN YVK G + +A   F+LI E D  +W+ +L+
Sbjct: 368 DANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILS 427

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            +    + E  ++I++Q+  EG   N++T+ SV+  CT+    +  G Q HAC +K+ L 
Sbjct: 428 AFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSL-MNLRFGTQVHACILKSGLQ 486

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           N   VS  LV MY++ G   SA  VF++ ++RD  SW  ++ GYA+    +K +E F+ M
Sbjct: 487 NDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSM 546

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
            R+++     T    ++ C+    +  G Q     +     + +      +VD+Y + G 
Sbjct: 547 LRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSG--WNSSVVSGALVDMYVKCGN 604

Query: 633 LEKAMDIINRMPFAASAT----VWRTVL 656
           +  A      M F  S T     W T++
Sbjct: 605 IADA-----EMLFHESETRDQVAWNTII 627



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/315 (32%), Positives = 173/315 (54%), Gaps = 6/315 (1%)

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           + ++ CA  + LR  ++LH+++L++ +  D  +   L+  Y KCG++ DA ++F  M   
Sbjct: 55  AALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH- 113

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQV 400
           +D+V+WTAMIS H   G  D A++ F +M +EG+ PNGFT + +L A    S      QV
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQV 173

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           H  ++K N      VG++L+ AY   G LD A  V   + E+  V+W+A+L GYA+ GD 
Sbjct: 174 HGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDY 233

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
              + I  +L + G + +++T  +V+  C     A + G+  HA  IK  L     ++S 
Sbjct: 234 RRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLA-KYGQSVHASVIKRGLETDNVLNSC 292

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           LV MYS+  + E A EVF R  + D+V  ++MI  + +H    +AL++F +M    ++ +
Sbjct: 293 LVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPN 352

Query: 581 GITFIGVITACTHAG 595
              F+G+    +  G
Sbjct: 353 HYIFVGIAGVASRTG 367



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 4/162 (2%)

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           + +G++ HA  +++ L+    +  +L+ MY K G +  A  VF     RD+V+W +MI  
Sbjct: 66  LRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISA 125

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI-Y 614
           +   G + +AL++F  M ++ +  +G T   V+ AC+         Q    +V  + +  
Sbjct: 126 HTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDD 185

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           P +   S +V+ Y+  G L+ A  ++  +P   S   W  +L
Sbjct: 186 PYVG--SSLVEAYTSCGELDAAETVLLGLP-ERSDVSWNALL 224


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 246/728 (33%), Positives = 386/728 (53%), Gaps = 93/728 (12%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           T+ +VL + A    +    +VH+++  N   V  ++   L+S Y     +++ R VFD M
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 241 E---------------------------------------------------DRDSITWN 249
           E                                                   DRD I+WN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           SM++GYV+N L       +  M   G ++  +T +SV+  CA +  L L + +HS  +K+
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
             +   N    L+  YSKCG ++ A ++F  M E ++VVSWT+MI+G+ ++G  D A+  
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGWSDGAIIL 339

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
             QM +EGV+ +    + IL A            VH +I   N   +  V  AL++ Y K
Sbjct: 340 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAK 399

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G ++ A  VF  +  KDI++W+ M      +G+               +KP+  T + +
Sbjct: 400 CGSMEGANSVFSTMVVKDIISWNTM------VGE---------------LKPDSRTMACI 438

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + AC + S A+E+GK+ H   ++   ++   V++ALV +Y K G +  A  +F     +D
Sbjct: 439 LPACASLS-ALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           LVSW  MI GY  HG+  +A+  F EMR   +E D ++FI ++ AC+H+GL+++G ++F 
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 557

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL---- 661
           IM N+ +I P +EHY+CMVDL SR G L KA   I  +P A  AT+W  +L  CR+    
Sbjct: 558 IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDI 617

Query: 662 ----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                       L+P ++  YVLL+N+YA     +E  R+R+ +  + ++K  G SWIE+
Sbjct: 618 ELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEI 677

Query: 712 KNKTYSFLAG-DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
           K +   F++G + SHP S +I S L+++  ++K+ GY P T Y L + D+  KE  L  H
Sbjct: 678 KGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGH 737

Query: 771 SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           SE+LA+AFGL+  P    +++ KNLRVCGDCH + K +SK  RR+IV+RD+NRFHHFK+G
Sbjct: 738 SEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDG 797

Query: 831 LCSCGDYW 838
            CSC  +W
Sbjct: 798 YCSCRGFW 805



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 269/604 (44%), Gaps = 98/604 (16%)

Query: 21  SLRSPFYSKKDQSLF----DRSPQRNF----VEYNRLLFEYCRDSLHQEALNLFLGIRRL 72
           SL++ F+S   +S        +P R       +YN  +  +C+    + A+ L    ++ 
Sbjct: 36  SLKTTFFSPIFRSCIPVRISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKS 95

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG 132
            L     T  SVL+ C  L     G++VH     +    D  +   LV  Y    ++++G
Sbjct: 96  ELET--KTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEG 153

Query: 133 RRVFDDMNESNV------------------------------------------------ 144
           RRVFD M + NV                                                
Sbjct: 154 RRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCD 213

Query: 145 ---VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
              +SW S++SGY  N + +R L ++ +M   GI  +  T  +VL   A+ G ++    V
Sbjct: 214 RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAV 273

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H++ IK+  E   +  N L+ MY K   +  A  VF+ M +R+ ++W SM+AGY  +   
Sbjct: 274 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWS 333

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
             A      M   G +L      S++  CA +  L   + +H  +  N +  +  +   L
Sbjct: 334 DGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNAL 393

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           M  Y+KCG ME A+ +FS M  +KD++SW  M+ G L                    +P+
Sbjct: 394 MDMYAKCGSMEGANSVFSTMV-VKDIISWNTMV-GEL--------------------KPD 431

Query: 382 GFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
             T + IL A  ++S      ++H +I++  Y     V  AL++ YVK G+L  A  +F+
Sbjct: 432 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 491

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
           +I  KD+V+W+ M+AGY   G    A+  + ++   G++P+E +F S++ AC+  S  +E
Sbjct: 492 MIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSH-SGLLE 550

Query: 498 QGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNS 551
           QG +F     +  +I+ KL +  C    +V + S+ GN+  A +  +      D   W +
Sbjct: 551 QGWRFFYIMKNDFNIEPKLEHYAC----MVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 606

Query: 552 MICG 555
           ++CG
Sbjct: 607 LLCG 610



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 148/550 (26%), Positives = 254/550 (46%), Gaps = 56/550 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+   R+ + +N ++  Y  + L +  L ++  +  LG+ +  +T+ SVL  C     
Sbjct: 207 LFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT 266

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ VH   +KS F R +N S +L+D+Y +  +++   RVF+ M E NVVSWTS+++G
Sbjct: 267 LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAG 326

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y R+  +D  + L  +M+ EG+K +    +++L   A  G +     VH  +  N     
Sbjct: 327 YTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASN 386

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             VCNAL+ MY K   +  A +VF  M  +D I+WN+MV      EL  ++         
Sbjct: 387 LFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG-----ELKPDS--------- 432

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   T   ++  CA+   L   +++H  +L+NG   D ++   L+  Y KCG +  
Sbjct: 433 -------RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL 485

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F M+   KD+VSWT MI+G+  +G  + A+  F +M   G+ P+  ++  IL A  
Sbjct: 486 ARLLFDMIPS-KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544

Query: 394 AVSPFQV---HAHIIKT--NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAW 447
                +      +I+K   N E        +++   + G L +A K  E +    D   W
Sbjct: 545 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIW 604

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
            A+L G     D E A K+  ++    ++P    +  ++    A +   E+ K+     +
Sbjct: 605 GALLCGCRIYHDIELAEKVAERVFE--LEPENTGYYVLLANIYAEAEKREEVKR-----M 657

Query: 508 KAKLNNALCVSSALVTMYSKKG--NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
           + K+               KKG       S +  + R    VS N+     + H H+KK 
Sbjct: 658 REKI--------------GKKGLRKNPGCSWIEIKGRVNLFVSGNN-----SSHPHSKKI 698

Query: 566 LEVFKEMRRQ 575
             + K+MRR+
Sbjct: 699 ESLLKKMRRK 708


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/678 (33%), Positives = 387/678 (57%), Gaps = 20/678 (2%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMR--TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           HC+ +K G + D+  + +++  Y R  +  +     +FD+M+  + V+W +++SGY  + 
Sbjct: 22  HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                 EL+  M+  G+ P+++TF ++L  +A    +    QVH++++K G E      +
Sbjct: 82  SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGS 141

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL+ MY K + VRDA  VF  +  R+S++WN+++AG+V    H  AF     M   G  L
Sbjct: 142 ALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRL 201

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              TF  ++ L    K  +L  QLH +++K+G+ FD+ +    + +YS+CG +EDA ++F
Sbjct: 202 DDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVF 261

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-QPAVSP 397
                 +D+V+W +M++  L +   + A   F  M + G  P+ +TY+ I++A     + 
Sbjct: 262 DGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNG 321

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKG--ILDEAAKVFELIDEKDIVAWSAMLAGYA 455
             +H  +IK   E+   +  A++  Y++     +++A  VF  ++ KD V+W+++L G++
Sbjct: 322 KSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFS 381

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G +E A+K++  +    V  + + FS+V+ +C+   A ++ G+Q H  ++K+   +  
Sbjct: 382 QTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCS-DLATLQLGQQIHVLTVKSGFESND 440

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V+S+L+ MYSK G IE A + F++  K   ++WNS++  YAQHG    AL +F +MR +
Sbjct: 441 FVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDK 500

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            ++ D ITF+  +TAC+H GLV++G+     M +++ I P MEHY+C VDL+ RAG L++
Sbjct: 501 KVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDE 560

Query: 636 AMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAA 681
           A  +I  MPF   A VW+T+L ACR              L+ L+P +   YV+LSNMY  
Sbjct: 561 AKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGH 620

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
              W E+A + +LM +RKVKK  G+SWIEVKN+ ++F+A D  H    +IY  LE+L   
Sbjct: 621 LKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMED 680

Query: 742 LKDAGYKPDTSYVLQDID 759
           +K       +  +L D+D
Sbjct: 681 IKWLDSVAGSDSLLDDVD 698



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 243/477 (50%), Gaps = 16/477 (3%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK--TCGC 90
           +LFD    R+ V +N ++  Y        A  L+  ++  GL     T  S+LK   C C
Sbjct: 57  NLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACAC 116

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
             D   G+QVH   VK G+   V   ++L+D+Y +   V D   VF  +   N VSW +L
Sbjct: 117 RLD--VGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNAL 174

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++G+     +D    L   M+ EG++ +  TFS +L +L ++      +Q+H  +IK+G 
Sbjct: 175 IAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGV 234

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDG-MEDRDSITWNSMVAGYVTNELHMEAFETFN 269
           +   +VCNA I+ Y +   + DA  VFDG +  RD +TWNSM+A ++ ++    AF+ F 
Sbjct: 235 QFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFL 294

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY--SK 327
           +M   G E    T+ ++I  C+        + LH  V+K G++    I   ++  Y  S 
Sbjct: 295 DMQQFGFEPDIYTYTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMYLESS 351

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
              MEDA  +F  M E KD VSW ++++G  Q G  + A+  F  M    V  + + +S 
Sbjct: 352 SNSMEDALNVFHSM-ESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSA 410

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L +   ++      Q+H   +K+ +E +  V ++L+  Y K G++++A K FE   +  
Sbjct: 411 VLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDS 470

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            + W++++  YAQ G  + A+ ++ Q+  + VK +  TF + + AC+     VEQG+
Sbjct: 471 SITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHI-GLVEQGR 526


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/681 (34%), Positives = 382/681 (56%), Gaps = 28/681 (4%)

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
           ++L V   +G+     QVH  ++K+G  +     N LI MY K +    A  VFD M +R
Sbjct: 11  SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           + ++W+++++G+V N     +   F+ MG  G      TF + +K C     L    Q+H
Sbjct: 71  NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
              LK G +    +   L+  YSKCG++ +A K+F  + + + ++SW AMI+G +  G  
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYG 189

Query: 364 DLAVNFFCQMTREGV--RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE--KSFSV 415
             A++ F  M    +  RP+ FT + +L A  +        Q+H  ++++ +    S ++
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
             +L++ YVK G L  A K F+ I EK +++WS+++ GYAQ G+   A+ ++++L     
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
           + + F  SS+I    A  A + QGKQ  A ++K        V +++V MY K G ++ A 
Sbjct: 310 QIDSFALSSIIGV-FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
           + F   + +D++SW  +I GY +HG  KK++ +F EM R ++E D + ++ V++AC+H+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
           ++ EG++ F  ++  H I P +EHY+C+VDL  RAG L++A  +I+ MP   +  +W+T+
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488

Query: 656 LAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
           L+ CR              L+ +   + A YV++SN+Y   G+W E+   R+L N + +K
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548

Query: 702 KEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA-GYKPDTSYVLQDIDD 760
           KEAG SW+E++ + + F +G+ SHP +  I   L+E   RL++  GY     + L DIDD
Sbjct: 549 KEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDD 608

Query: 761 EHKEAILSQHSERLAIAFGLVA---TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           E KE  L  HSE+LAI   L        G  +++ KNLRVC DCH  IK +SK+ +   V
Sbjct: 609 ESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYV 668

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           VRD  RFH F++G CSCGDYW
Sbjct: 669 VRDAVRFHSFEDGCCSCGDYW 689



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 148/513 (28%), Positives = 261/513 (50%), Gaps = 24/513 (4%)

Query: 80  TLSSVLKTC--GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
            L S+L+ C    L D   G QVHC  +KSG   ++  S  L+D+Y +        +VFD
Sbjct: 8   NLVSILRVCTRKGLSDQ--GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            M E NVVSW++L+SG+  N      L LF  M  +GI PN FTFST L        +  
Sbjct: 66  SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
            +Q+H   +K G E++  V N+L+ MY K   + +A  VF  + DR  I+WN+M+AG+V 
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185

Query: 258 NELHMEAFETFNNMGLAGAELTRSTF--VSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                +A +TF  M  A  +     F   S++K C++T  +   +Q+H  ++++G     
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245

Query: 316 N--IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           +  I   L+  Y KCG +  A K F  ++E K ++SW+++I G+ Q G    A+  F ++
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWSSLILGYAQEGEFVEAMGLFKRL 304

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
                + + F  S I+      +      Q+ A  +K       SV  ++++ Y+K G++
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           DEA K F  +  KD+++W+ ++ GY + G  + +V+I+ ++    ++P+E  + +V++AC
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424

Query: 490 TAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-K 543
           +  S  +++G++  +       IK ++ +  CV    V +  + G ++ A  +      K
Sbjct: 425 S-HSGMIKEGEELFSKLLETHGIKPRVEHYACV----VDLLGRAGRLKEAKHLIDTMPIK 479

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
            ++  W +++     HG  +   EV K + R D
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 512



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 197/373 (52%), Gaps = 8/373 (2%)

Query: 23  RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS 82
           R P  + K   +FD  P+RN V ++ L+  +  +   + +L+LF  + R G+     T S
Sbjct: 55  REPLMAYK---VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFS 111

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           + LK CG L     G Q+H  C+K GF   V V  SLVD+Y +   + +  +VF  + + 
Sbjct: 112 TNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR 171

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK--PNSFTFSTVLGVLADEGIVATAVQ 200
           +++SW ++++G+       + L+ F  MQ   IK  P+ FT +++L   +  G++    Q
Sbjct: 172 SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQ 231

Query: 201 VHTMVIKNGGEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +H  ++++G    +S  +  +L+ +Y+K   +  AR  FD ++++  I+W+S++ GY   
Sbjct: 232 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQE 291

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
              +EA   F  +    +++      S+I + A    LR  +Q+ +  +K     + ++ 
Sbjct: 292 GEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL 351

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             ++  Y KCG +++A K F+ M ++KDV+SWT +I+G+ ++G    +V  F +M R  +
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410

Query: 379 RPNGFTYSIILTA 391
            P+   Y  +L+A
Sbjct: 411 EPDEVCYLAVLSA 423


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/700 (34%), Positives = 387/700 (55%), Gaps = 35/700 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR +H   + +G      ++ SL++LY + ++      VFD +N  +VVSW  L++ +++
Sbjct: 29  GRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQ 88

Query: 157 NKMNDRVLELFHR-----MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            + +   L + H      M  + I PN+ T + V    +         Q H + +K    
Sbjct: 89  QQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACS 148

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                 ++L++MY K+ +V +AR +FD M +R++++W +M++GY + EL  EAFE F  M
Sbjct: 149 HDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLM 208

Query: 272 --GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
                G       F SV+        +   RQ+HS  +KNG+    ++   L+  Y KCG
Sbjct: 209 RHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCG 268

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +EDA K F +    K+ ++W+AM++G  Q G  D A+  F  M + G  P+ FT   ++
Sbjct: 269 SLEDALKTFELSGN-KNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVI 327

Query: 390 TAQ----PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A       V   Q+H + +K  YE    V +AL++ Y K G + +A K FE I + D+V
Sbjct: 328 NACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVV 387

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W++++ GY Q GD EGA+ +Y ++   GV PN+ T +SV+ AC+   AA++QGKQ HA 
Sbjct: 388 LWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNL-AALDQGKQMHAG 446

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            IK   +  + + SAL  MY+K G+++    +F R   RD++SWN+MI G +Q+G   + 
Sbjct: 447 IIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEG 506

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           LE+F++M  +  + D +TF+ +++AC+H GLVD G  YF +M +E +I PT+EHY+CMVD
Sbjct: 507 LELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVD 566

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAI 671
           + SRAG L +A + I          +WR +LAA               +L+ L   +S+ 
Sbjct: 567 ILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSA 626

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVLLS++Y A G W++  RVR +M  R V KE G SWIE+K+ T+ F+ GD  HPQ ++I
Sbjct: 627 YVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEI 686

Query: 732 YSKLEELSTRLKDAGYKP--------DTSYVLQDIDDEHK 763
              L+ L+  +KD GY+P          S  L+D +D H+
Sbjct: 687 RLGLKLLTKLMKDEGYQPLLDSLPPETISDDLKDQEDSHE 726



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 168/547 (30%), Positives = 286/547 (52%), Gaps = 23/547 (4%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLP-----LFGSTLSSV 84
           K   +FD    ++ V +N L+  + +   H  +L++    R+L +          TL+ V
Sbjct: 63  KANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGV 122

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
                 L D   GRQ H   VK+  + DV  ++SL+++Y +T  V + R +FD+M E N 
Sbjct: 123 FTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNA 182

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           VSW +++SGYA  ++ D   ELF  M+ E  G   N F F++VL  L    +V T  QVH
Sbjct: 183 VSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVH 242

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           ++ +KNG   + SV NAL++MY+K   + DA   F+   +++SITW++MV G+       
Sbjct: 243 SLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSD 302

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +A + F +M  +G   +  T V VI  C+    +   RQ+H   LK G +    + + L+
Sbjct: 303 KALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALV 362

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+KCG + DA K F  +++  DVV WT++I+G++QNG  + A+N + +M   GV PN 
Sbjct: 363 DMYAKCGSIVDARKGFECIQQ-PDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPND 421

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T + +L A   ++      Q+HA IIK N+     +G+AL   Y K G LD+  ++F  
Sbjct: 422 LTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWR 481

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  +D+++W+AM++G +Q G     ++++ ++  EG KP+  TF ++++AC+     V++
Sbjct: 482 MPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSH-MGLVDR 540

Query: 499 G-----KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSM 552
           G       F   +I   + +  C    +V + S+ G +  A E  +       L  W  +
Sbjct: 541 GWVYFKMMFDEFNIAPTVEHYAC----MVDILSRAGKLHEAKEFIESATVDHGLCLWRIL 596

Query: 553 ICGYAQH 559
           +     H
Sbjct: 597 LAASKNH 603



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 191/361 (52%), Gaps = 20/361 (5%)

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C   K+LR  R LH+++L  G      I   L+  Y+KC     A+ +F  +   KDVVS
Sbjct: 20  CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINN-KDVVS 78

Query: 350 WTAMISGHLQNGAIDLAV---NFFCQ--MTREGVRPNGFTYSIILTAQPAVSPF----QV 400
           W  +I+   Q  A   ++   + F Q  M  + + PN  T + + TA   +S      Q 
Sbjct: 79  WNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQA 138

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           HA  +KT         ++LLN Y K G++ EA  +F+ + E++ V+W+ M++GYA     
Sbjct: 139 HALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELA 198

Query: 461 EGAVKIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
           + A ++++ +  E  G   NEF F+SV++A T     V  G+Q H+ ++K  L   + V+
Sbjct: 199 DEAFELFKLMRHEEKGKNENEFVFTSVLSALTC-YMLVNTGRQVHSLAMKNGLVCIVSVA 257

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +ALVTMY K G++E A + F+    ++ ++W++M+ G+AQ G + KAL++F +M +    
Sbjct: 258 NALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGEL 317

Query: 579 FDGITFIGVITACTHAGLVDEGQQ---YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
               T +GVI AC+ A  + EG+Q   Y   +  E  +Y      S +VD+Y++ G +  
Sbjct: 318 PSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYV----LSALVDMYAKCGSIVD 373

Query: 636 A 636
           A
Sbjct: 374 A 374



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 85/171 (49%), Gaps = 13/171 (7%)

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           + +G+  HA  +     ++  ++++L+ +Y+K  +   A+ VF     +D+VSWN +I  
Sbjct: 26  LRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINA 85

Query: 556 YAQ---HGHTKKALEVFKE--MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN- 609
           ++Q   H  +   + +F++  M  + +  +  T  GV TA +       G+Q   + V  
Sbjct: 86  FSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKT 145

Query: 610 --EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
              H ++      S ++++Y + G++ +A D+ + MP   +A  W T+++ 
Sbjct: 146 ACSHDVFAA----SSLLNMYCKTGLVFEARDLFDEMP-ERNAVSWATMISG 191


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/576 (39%), Positives = 348/576 (60%), Gaps = 26/576 (4%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG---LMVAYSKCGKMEDASKIFSM 340
           +S+++ CA++K     +Q+H+  +++G+  + N   G   +    S    M  A  +F++
Sbjct: 21  ISLLQFCASSK--HKLKQIHAFSIRHGVSLN-NPDMGKHLIFTIVSLSAPMSYAYNVFTV 77

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ- 399
           +    +V +W  +I G+ ++     A  F+ QM    V P+  TY  +L A       + 
Sbjct: 78  IHN-PNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVRE 136

Query: 400 ---VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
              +H+  I+  +E    V  +LL+ Y   G  + A KVFEL+ E+D+VAW++M+ G+A 
Sbjct: 137 GEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFAL 196

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G    A+ ++R+++ EGV+P+ FT  S+++A +A   A+E G++ H   +K  L+    
Sbjct: 197 NGRPNEALTLFREMSVEGVEPDGFTVVSLLSA-SAELGALELGRRVHVYLLKVGLSKNSH 255

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V+++L+ +Y+K G I  A  VF    +R+ VSW S+I G A +G  ++ALE+FKEM  Q 
Sbjct: 256 VTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQG 315

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           L    ITF+GV+ AC+H G++DEG +YF  M  E  I P +EHY CMVDL SRAG++++A
Sbjct: 316 LVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQA 375

Query: 637 MDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAAT 682
            + I  MP   +A +WRT+L AC               L++L+P  S  YVLLSN+YA+ 
Sbjct: 376 YEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASE 435

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
             W +   +R+ M    VKK  GYS +E+ N+ Y F  GD SHPQS  +Y+ LE+++  L
Sbjct: 436 RRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELL 495

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           K  GY P T+ VL DI++E KE  LS HSE++AIAF L+ TP G P++++KNLRVC DCH
Sbjct: 496 KLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCH 555

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             IKLI+K+  R+IV+RD +RFHHF+ G CSC DYW
Sbjct: 556 MAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 167/358 (46%), Gaps = 34/358 (9%)

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           VF  ++  NV +W +++ GYA +         + +M V  ++P++ T+  +L  ++    
Sbjct: 74  VFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLN 133

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           V     +H++ I+NG E +  V N+L+ +Y        A  VF+ M++RD + WNSM+ G
Sbjct: 134 VREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMING 193

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           +  N    EA   F  M + G E    T VS++   A    L L R++H  +LK G+  +
Sbjct: 194 FALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKN 253

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
            ++   L+  Y+KCG + +A ++FS M E ++ VSWT++I G   NG  + A+  F +M 
Sbjct: 254 SHVTNSLLDLYAKCGAIREAQRVFSEMSE-RNAVSWTSLIVGLAVNGFGEEALELFKEME 312

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            +G+ P+  T+                                 +L A    G+LDE  +
Sbjct: 313 GQGLVPSEITF-------------------------------VGVLYACSHCGMLDEGFE 341

Query: 435 VFELIDEK-DIVAWSAMLAGYAQIGDTEGAVK-IYRQLTSEGVKPNEFTFSSVINACT 490
            F  + E+  I+           +    G VK  Y  + +  V+PN   + +++ ACT
Sbjct: 342 YFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACT 399



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 28/284 (9%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  +H   +++GF   V V  SL+ +Y    + E   +VF+ M E ++V+W S+++G+A 
Sbjct: 137 GEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFAL 196

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N   +  L LF  M VEG++P+ FT  ++L   A+ G +    +VH  ++K G    + V
Sbjct: 197 NGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHV 256

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+L+ +Y K   +R+A+ VF  M +R++++W S++ G   N    EA E F  M   G 
Sbjct: 257 TNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGL 316

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT-----------GLMV-A 324
             +  TFV V+  C+           H  +L  G ++   ++            G MV  
Sbjct: 317 VPSEITFVGVLYACS-----------HCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDL 365

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAM-----ISGHLQNGAI 363
            S+ G ++ A +    M    + V W  +     I GHL  G I
Sbjct: 366 LSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEI 409



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+   +R+ V +N ++  +  +    EAL LF  +   G+   G T+ S+L     L  
Sbjct: 175 VFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGA 234

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR+VH   +K G +++ +V+ SL+DLY +   + + +RVF +M+E N VSWTSL+ G
Sbjct: 235 LELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVG 294

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL------GVLADEG 193
            A N   +  LELF  M+ +G+ P+  TF  VL      G+L DEG
Sbjct: 295 LAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGML-DEG 339


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 343/595 (57%), Gaps = 39/595 (6%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK--CGKM------- 331
           ++  + +K CA      L   LH+  +++G   D      L+  Y K  C  +       
Sbjct: 51  ASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAI 110

Query: 332 ----------EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
                     E   K+F  M E +DVVSW  ++ G  + G    A+ F  +M REG RP+
Sbjct: 111 VDVPGSSTAFESVRKVFDEMIE-RDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPD 169

Query: 382 GFTYSIILTAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            FT S +L      +      +VH    +  ++    VG++L++ Y      D + KVF+
Sbjct: 170 SFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFD 229

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            +  +D + W+++LAG AQ G  E A+ I+R++   GV+P   TFSS+I  C    A++ 
Sbjct: 230 NLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVC-GNLASLR 288

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            GKQ HA  I     + + +SS+L+ MY K G I  A  +F +    D+VSW +MI GYA
Sbjct: 289 FGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYA 348

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
            HG  ++AL +F+ M   + + + ITF+ V+TAC+HAGLVD+G +YF  M N + I PT+
Sbjct: 349 LHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTL 408

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LIS 663
           EH++ + D   RAG L++A + I++M    +A+VW T+L ACR              ++ 
Sbjct: 409 EHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 468

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           L+P     +V+LSNMY+A+G W E A +R+ M  + +KK+   SWIEVK+K + F+A D 
Sbjct: 469 LEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDR 528

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
           SHP  ++I   L   S ++   G+ P+T  V QDI++EHK  +L  HSE+LAI FG+++T
Sbjct: 529 SHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIIST 588

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           PAG  ++++KNLRVC DCHTV K ISKL  R+IVVRD NRFHHFK+G CSCGD+W
Sbjct: 589 PAGTKIRVMKNLRVCIDCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 163/592 (27%), Positives = 253/592 (42%), Gaps = 80/592 (13%)

Query: 61  EALNLFLGIRRLGLPL--FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTS 118
           +A++LFL +R    P     ++L + LK+C  L     G  +H   ++SG   D   + +
Sbjct: 31  DAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANA 90

Query: 119 LVDLYMR-------------------TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           L++LY +                   +   E  R+VFD+M E +VVSW +L+ G A    
Sbjct: 91  LLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGR 150

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
           +   L    +M  EG +P+SFT STVL + A+   V   ++VH    +NG +    V ++
Sbjct: 151 HHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSS 210

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI MY        +  VFD +  RD I WNS++AG   N    EA   F  M  AG    
Sbjct: 211 LIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPV 270

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             TF S+I +C     LR  +QLH+ V+  G + +  I + L+  Y KCG++  A  IF 
Sbjct: 271 PVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFD 330

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
            M    DVVSWTAMI G+  +G    A+  F +M     +PN  T+  +LTA        
Sbjct: 331 KMSS-PDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACS------ 383

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKDIVAWSAMLAGYAQIG 458
            HA                        G++D+  K F+ + +   IV     L  +A + 
Sbjct: 384 -HA------------------------GLVDKGWKYFKSMSNHYGIV---PTLEHFAALA 415

Query: 459 DTEGAV----KIYRQLTSEGVKPNEFTFSSVINACTAPS---AAVEQGKQFHACSIKAKL 511
           DT G      + Y  ++   +KP    +S+++ AC        A E  K+      ++  
Sbjct: 416 DTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIG 475

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           ++ +     L  MYS  G    A+ + +  RK+ +       C + +    K  L VF  
Sbjct: 476 SHVV-----LSNMYSASGRWNEAAHLRESMRKKGMK--KDPACSWIE---VKSKLHVFVA 525

Query: 572 MRRQDLEFDGITFIGVITACTH----AGLVDEGQQYFDIMVNEHHIYPTMEH 619
             R    +D I  I  + A +      G V   +  F  +  EH  Y    H
Sbjct: 526 HDRSHPWYDRI--IDALNAFSEQMAREGHVPNTEDVFQDIEEEHKSYVLCGH 575



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 176/420 (41%), Gaps = 45/420 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ V +N L+     +  H EAL     + R G      TLS+VL      
Sbjct: 124 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAEC 183

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G +VH    ++GF  DV V +SL+D+Y      +   +VFD++   + + W SLL
Sbjct: 184 ADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLL 243

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G A+N   +  L +F RM   G++P   TFS+++ V  +   +    Q+H  VI  G E
Sbjct: 244 AGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFE 303

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + ++LI MY K   +  A  +FD M   D ++W +M+ GY  +    EA   F  M
Sbjct: 304 DNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERM 363

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L  A+    TF++V+  C                                   S  G +
Sbjct: 364 ELGNAKPNHITFLAVLTAC-----------------------------------SHAGLV 388

Query: 332 EDASKIFSMMREMKDVVS----WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           +   K F  M     +V     + A+     + G +D A NF  +M    ++P    +S 
Sbjct: 389 DKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ---IKPTASVWST 445

Query: 388 ILTAQPAVSPFQVHAHIIKTNYE---KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           +L A        +   + K   E   +S      L N Y   G  +EAA + E + +K +
Sbjct: 446 LLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGM 505


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/767 (32%), Positives = 410/767 (53%), Gaps = 33/767 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR++H   ++SG+   + +S  L+ +Y R  +  D   + D M   N VSW +++   A+
Sbjct: 31  GRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQ 90

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                R L  F RM  +G  P++  F   L ++   G +     V     K+G +    V
Sbjct: 91  AGDFPRSLLFFQRMLQDGSVPDAVVF---LSLIKAPGTIQEGEIVQDFAKKSGFDRSFVV 147

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             ALI MY +   +  A+  FD +++R  ++WN+++  Y   +   ++   F  M L G 
Sbjct: 148 GTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEKEQSLRVFREMLLQGI 207

Query: 277 ELTRSTFVSVIKLCA--TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                T + +    A    K       +H+  + +G+     +   ++  + + G +  A
Sbjct: 208 APNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISRA 267

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
           ++IF  + + +DV SW  MI+   +NG +  A++ + +MT   +RP+G T+  +L A   
Sbjct: 268 NEIFEKV-DQRDVCSWNTMIAAFAKNGHVFEALDLYGRMT---IRPDGVTFVNVLEACDC 323

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
               +    +H       Y+    V TAL++ Y + G LD AA+VF  I    ++  +A+
Sbjct: 324 PDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAI 383

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH----ACS 506
           +A +AQ G  +G++  +RQ+   G++P++FT  +V+ AC    AA   G+  H     C 
Sbjct: 384 IAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECP 443

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
                ++ L V +ALV MY+K G++++A  +F    + ++ +WN+++ GYAQHG+   A+
Sbjct: 444 GDCDPHDIL-VRNALVNMYAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAV 502

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +  EM+   +  D I+F   ++A +HA  V++G + F  +  ++ + P++EHY  +VDL
Sbjct: 503 RLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDL 562

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIY 672
             RAG LE+A   +  M  AA A  W  +L ACR+              +++ P   A Y
Sbjct: 563 LGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASY 622

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
            +LSN+Y+A G W E   +R+ M +   +KE G SWIEVKN+ + F   D SHP++ +IY
Sbjct: 623 TVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIY 682

Query: 733 SKLEELSTRLK-DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
            +L+EL   LK +  Y PD   VL D++DEH+E +L  HSE+LA+ FGL+ T  G+ + I
Sbjct: 683 ERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITI 742

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KNLR+C DCH V+KL SK  +R+IVVRD  RFHHF  G CSC D W
Sbjct: 743 IKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 256/532 (48%), Gaps = 37/532 (6%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           S+  + L DR P+RN V +N ++    +      +L  F  + + G         S++K 
Sbjct: 63  SRDAELLLDRMPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKA 122

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
            G + +   G  V     KSGF R   V T+L+ +Y R   ++  +  FD + E  VVSW
Sbjct: 123 PGTIQE---GEIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSW 179

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF----STVLGVLADEGIVATAVQVHT 203
            +L++ Y+R    ++ L +F  M ++GI PN+ T     S V G+ A   I      +H 
Sbjct: 180 NALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAK--ITTCGNLIHA 237

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
             I +G   VT+V N++I+++ +   +  A  +F+ ++ RD  +WN+M+A +  N    E
Sbjct: 238 CSIDSGLISVTTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFE 297

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A + +  M +    +   TFV+V++ C    +L     +H     +G D D  + T L+ 
Sbjct: 298 ALDLYGRMTIRPDGV---TFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVS 354

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y +CG+++ A+++F+ ++    V++  A+I+ H Q G  D ++  F QM + G+RP+ F
Sbjct: 355 MYRRCGRLDRAAEVFAAIQH-PGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKF 413

Query: 384 TYSIILTAQP----------------AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           T   +L A                  A  P     H I         V  AL+N Y K G
Sbjct: 414 TLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDIL--------VRNALVNMYAKCG 465

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
            LD A  +F+   + ++  W+A++AGYAQ G  + AV++  ++   G+ P+  +F++ ++
Sbjct: 466 DLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALS 525

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           A +      +  + F+A S    L  ++    A+V +  + G +E A    +
Sbjct: 526 ASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLR 577



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 4/151 (2%)

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
           S +++QG++ H   I++   + L +S+ L+ MY++  +   A  +  R  +R+ VSWN++
Sbjct: 25  STSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAV 84

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I   AQ G   ++L  F+ M +     D + F+ +I A    G + EG+   D    +  
Sbjct: 85  IRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKA---PGTIQEGEIVQD-FAKKSG 140

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
              +    + ++ +Y R G L++A D  +R+
Sbjct: 141 FDRSFVVGTALIGMYGRCGRLDRAKDAFDRI 171


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/583 (39%), Positives = 345/583 (59%), Gaps = 32/583 (5%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN---------IRTGLMVAYSKCGKME 332
           +   ++KLC         R +H  V  +G    H          +   L+  Y+K G ++
Sbjct: 74  SLTRLVKLCVRHGTAGDGRLIHRHVEAHG-QLSHYSGGAGGGIFVSNSLVSMYAKFGLLD 132

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQ-NGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           DA ++F  M E ++VV+WT +++     +G  + A+ F   M R+GV PN +T+S +L A
Sbjct: 133 DALRLFDRMPE-RNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGA 191

Query: 392 --QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
              P V    +HA  +K   +    V ++L++AY+K G LD   +VF+ +  +D+V W++
Sbjct: 192 CGTPGVLA-ALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNS 250

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++AG+AQ GD  GA++++ ++   G   N+ T +SV+ ACT     +E G+Q HA  +K 
Sbjct: 251 IIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTG-MVMLEAGRQVHAHVLKY 309

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
           + +  L + +AL+ MY K G++E A  +F R  +RD++SW++MI G AQ+G + +AL VF
Sbjct: 310 ERD--LILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVF 367

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             M+ + +  + IT +GV+ AC+HAGLV++G  YF  M     I P  EH++CMVDL  R
Sbjct: 368 DLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGR 427

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLL 675
           AG L++A++ I  M     A +WRT+L ACR+              + L+P D    VLL
Sbjct: 428 AGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLL 487

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN YA    W +  +  K M DR +KKE G SWIE++   + F+AGD+SHP S+ I  +L
Sbjct: 488 SNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQEL 547

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
             L  R+   GY P T +VLQD+  E KE +L  HSE++AIAFG +    G P++I+KNL
Sbjct: 548 NRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFGTMHAVGGKPIRIMKNL 607

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+CGDCH   KL+SK E R I++RD  RFHHF++G CSCGDYW
Sbjct: 608 RICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCGDYW 650



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 179/360 (49%), Gaps = 27/360 (7%)

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR-NKMNDRVLE 165
            G    + VS SLV +Y +   ++D  R+FD M E NVV+WT++++  A  +   +  L 
Sbjct: 109 GGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALR 168

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
               M  +G+ PN++TFS+VLG     G++A    +H   +K G +    V ++LI  Y+
Sbjct: 169 FLVAMWRDGVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVFVRSSLIDAYM 225

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K   +   R VFD M  RD + WNS++AG+  +   + A E F  M  AG    + T  S
Sbjct: 226 KLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTS 285

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V++ C     L   RQ+H+ VLK   + D  +   L+  Y KCG +EDA  +F  M + +
Sbjct: 286 VLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQ-R 342

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
           DV+SW+ MISG  QNG    A+  F  M  EGV PN  T   +L A         HA ++
Sbjct: 343 DVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACS-------HAGLV 395

Query: 406 KTNY------EKSFSVG------TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLA 452
           +  +      +K F +         +++   + G LDEA +    ++ E D V W  +L 
Sbjct: 396 EDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLG 455



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 156/324 (48%), Gaps = 7/324 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCR-DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           LFDR P+RN V +  ++      D   +EAL   + + R G+     T SSVL  CG   
Sbjct: 137 LFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGT-- 194

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
             V    +H   VK G   DV V +SL+D YM+  +++ GRRVFD+M   ++V W S+++
Sbjct: 195 PGVLA-ALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIA 253

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G+A++      +ELF RM+  G   N  T ++VL       ++    QVH  V+K   ++
Sbjct: 254 GFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLKYERDL 313

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
           +    NAL+ MY K   + DA A+F  M  RD I+W++M++G   N    EA   F+ M 
Sbjct: 314 ILH--NALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMK 371

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKM 331
             G    R T V V+  C+    +         + K  GI  +      ++    + GK+
Sbjct: 372 SEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKL 431

Query: 332 EDASKIFSMMREMKDVVSWTAMIS 355
           ++A +    M    D V W  ++ 
Sbjct: 432 DEAVEFIRDMNLEPDAVIWRTLLG 455


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/564 (39%), Positives = 339/564 (60%), Gaps = 21/564 (3%)

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           ++ L   +Q+H+ ++K+G+     +   L+  YSK      +S++F    E K   +W++
Sbjct: 67  SRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEE-SERKSSTTWSS 125

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
           +IS   QN    LA+ +FC+M  E + P+   +     A   +        VH  +IKT 
Sbjct: 126 VISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTG 185

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           Y+    VG++L++ Y K G + EA  VF+ +  +++V+WS M+ GY Q+G+ E A+++++
Sbjct: 186 YDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFK 245

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           +   EG+  N+FT SSVI  C + +  +E GKQ H    K   + +  V S+L+++YSK 
Sbjct: 246 EALLEGLDVNDFTLSSVIRVCGS-ATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKC 304

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G IE A  VF     ++L  WN+M+   AQH HTK+A ++F +M    +  + ITF+ V+
Sbjct: 305 GLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVL 364

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC+HAGLV+EG++YF +M  ++ I P  +HY+ MVDL  RAG L++A+ +I  MP   +
Sbjct: 365 YACSHAGLVEEGKKYFALM-KKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT 423

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
            +VW   +  CR+                L    S ++V+LSN YAA G +++ A+ RK+
Sbjct: 424 ESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKM 483

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           + DR VKKE G SWIE  N+ + F AGD  H +  +IY KLE+L   ++ AGY  DTS+V
Sbjct: 484 LRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFV 543

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L+++  E K   +  HSERLAIAFGL++ P G P++I+KNLRVCGDCH  IK ISKL  R
Sbjct: 544 LREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGR 603

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
            I+VRD NRFH F++G CSC DYW
Sbjct: 604 VIIVRDNNRFHRFEDGKCSCADYW 627



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 207/466 (44%), Gaps = 54/466 (11%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+Q+H   +KSG      V   L++ Y +T       +VF++    +  +W+S++S +A+
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQ 132

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N+     ++ F RM  E + P+   F +     A  G       VH +VIK G +V   V
Sbjct: 133 NEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFV 192

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY K   +++AR VFD M  R+ ++W+ M+ GY     H EA   F    L G 
Sbjct: 193 GSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGL 252

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           ++   T  SVI++C +   L L +Q+H    K   D    + + L+  YSKCG +E A +
Sbjct: 253 DVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYR 312

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  +  +K++  W AM+    Q+     A + F +M   G+RPN  T+  +L A     
Sbjct: 313 VFDEV-PIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACS--- 368

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA----WSAMLA 452
               HA                        G+++E  K F L+ + +I      +++M+ 
Sbjct: 369 ----HA------------------------GLVEEGKKYFALMKKYEIEPGTQHYASMVD 400

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC----TAPSAAVEQGKQFHACSIK 508
              + G  + A+ + + + +E   P E  + + I  C        AA    K F   ++ 
Sbjct: 401 LLGRAGKLQEALSVIKGMPTE---PTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVS 457

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL-----VSW 549
           + L+        L   Y+  G  E A++  K  R R +     +SW
Sbjct: 458 SGLH------VMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSW 497



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 163/346 (47%), Gaps = 5/346 (1%)

Query: 26  FYSKKDQSL-----FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK    L     F+ S +++   ++ ++  + ++     A+  F  +    L      
Sbjct: 98  FYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHI 157

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
             S  K C  L     G+ VHC  +K+G+  DV V +SLVD+Y +  ++++ R VFD+M 
Sbjct: 158 FPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMP 217

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             NVVSW+ ++ GY +   ++  + LF    +EG+  N FT S+V+ V     ++    Q
Sbjct: 218 HRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQ 277

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H +  K   ++   V ++LIS+Y K  ++  A  VFD +  ++   WN+M+     +  
Sbjct: 278 IHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAH 337

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EAF+ F  M  AG      TF+ V+  C+    +   ++  + + K  I+        
Sbjct: 338 TKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYAS 397

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           ++    + GK+++A  +   M        W A I+G   +G  DLA
Sbjct: 398 MVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLA 443


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/691 (35%), Positives = 394/691 (57%), Gaps = 54/691 (7%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P +F  + +L   A  G +A A +V   +      + T   NAL+S    S++V D   +
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMPDP--NLFTR--NALLSALAHSRLVPDMERL 101

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKE 295
           F  M +RD++++N+++ G+ +      + + +  +        TR T  ++I + +   +
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM----------- 344
             L   +H QVL+ G      + + L+  Y+K G + DA ++F  M              
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221

Query: 345 -------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
                              +D ++WT M++G  QNG    A++ F +M  EGV  + +T+
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
             ILTA  A++      Q+HA+I +T YE +  VG+AL++ Y K   +  A  VF  +  
Sbjct: 282 GSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTC 341

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           ++I++W+AM+ GY Q   +E AV+ + ++  +G+KP++FT  SVI++C A  A++E+G Q
Sbjct: 342 RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSC-ANLASLEEGAQ 400

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
           FH  ++ + L   + VS+ALVT+Y K G+IE A  +F      D VSW +++ GYAQ G 
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
            K+ +++F++M    L+ DG+TFIGV++AC+ AGLV++G  YFD M  +H I P  +HY+
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPH 667
           CM+DLYSR+G  ++A + I +MP +  A  W T+L++CR              L+   P 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           + A YVLL +M+AA G W E A +R+ M DR+VKKE G SWI+ KNK + F A D SHP 
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 640

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
           S++IY KLE L++++ + GYKPD S VL D+ D  K  ++S HSE+LAIAFGL+  P   
Sbjct: 641 SSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEM 700

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVV 818
           P++IVKNLR      T+ + +S+ E +++ +
Sbjct: 701 PIRIVKNLRGNLVYLTLQRRLSREEFKEVAI 731



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 243/527 (46%), Gaps = 78/527 (14%)

Query: 100 VHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV-------------- 144
           VHC  +K+   A    +   L+  Y ++  +   RRVFD+M + N+              
Sbjct: 34  VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93

Query: 145 -----------------VSWTSLLSGYARNKMNDRVLELFHR-MQVEGIKPNSFTFSTVL 186
                            VS+ +L++G++      R ++L+   ++ E ++P   T S ++
Sbjct: 94  LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 187 GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME----- 241
            V +     A    VH  V++ G      V + L+ MY K  ++RDAR VF  ME     
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213

Query: 242 --------------------------DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
                                     DRDSITW +MV G   N L +EA + F  M   G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
             + + TF S++  C     L   +Q+H+ + +   + +  + + L+  YSKC  +  A 
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F  M   ++++SWTAMI G+ QN   + AV  F +M  +G++P+ FT   ++++   +
Sbjct: 334 AVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           +      Q H   + +   +  +V  AL+  Y K G +++A ++F+ +   D V+W+A++
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK--- 508
            GYAQ G  +  + ++ ++ + G+KP+  TF  V++AC+  +  VE+G  +     K   
Sbjct: 453 TGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSR-AGLVEKGCDYFDSMQKDHG 511

Query: 509 -AKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMI 553
              +++     + ++ +YS+ G  + A E  K+     D   W +++
Sbjct: 512 IVPIDDHY---TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 209/468 (44%), Gaps = 39/468 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGC 90
           + LF   P+R+ V YN L+  +        ++ L+  + R   +     TLS+++     
Sbjct: 99  ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV----- 145
           L D   G  VHC+ ++ GF     V + LVD+Y +   + D RRVF +M    VV     
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218

Query: 146 --------------------------SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
                                     +WT++++G  +N +    L++F RM+ EG+  + 
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           +TF ++L        +    Q+H  + +   E    V +AL+ MY K + +R A AVF  
Sbjct: 279 YTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRR 338

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  R+ I+W +M+ GY  N    EA   F+ M + G +    T  SVI  CA    L   
Sbjct: 339 MTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEG 398

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            Q H   L +G+     +   L+  Y KCG +EDA ++F  M    D VSWTA+++G+ Q
Sbjct: 399 AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVTGYAQ 457

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG--- 416
            G     ++ F +M   G++P+G T+  +L+A       +       +  +    V    
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDD 517

Query: 417 --TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTE 461
             T +++ Y + G   EA + + ++    D   W+ +L+     G+ E
Sbjct: 518 HYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNME 565



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 165/347 (47%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF     R+ + +  ++    ++ L  EAL++F  +R  G+ +   T  S+L  CG L
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H    ++ +  +V V ++LVD+Y +  ++     VF  M   N++SWT+++
Sbjct: 292 AALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMI 351

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY +N  ++  +  F  MQ++GIKP+ FT  +V+   A+   +    Q H + + +G  
Sbjct: 352 VGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLM 411

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V NAL+++Y K   + DA  +FD M   D ++W ++V GY       E  + F  M
Sbjct: 412 RYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKM 471

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNI------RT 319
              G +    TF+ V+  C+            + +++ G D+      DH I       T
Sbjct: 472 LANGLKPDGVTFIGVLSACS-----------RAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            ++  YS+ G+ ++A +    M    D   W  ++S     G +++ 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIG 567


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/709 (34%), Positives = 391/709 (55%), Gaps = 21/709 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FD  P R+ V +  ++           AL LF  +   G+   G  L++ LK C   
Sbjct: 115 RSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVG 174

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  F  QVH + VK     D  VS+SLV+ Y+    V+   R   D    + VSW +LL
Sbjct: 175 SDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALL 234

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + YAR+    +V+ +F ++   G + + +T  TVL    + G+  +   VH +VIK G E
Sbjct: 235 NEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLE 294

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + N LI MY K     DA  VF  +++ D +  + M++ +  +++  EAF+ F  M
Sbjct: 295 TDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQM 354

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +  + TFV +  + + T ++ L R +H+ ++K+G      +   ++  Y K G +
Sbjct: 355 SDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAV 414

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA   F +M +  D+ SW  ++SG       +  +  F ++  EGV  N +TY  IL  
Sbjct: 415 QDAILAFDLM-QGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRC 473

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             ++       QVHA ++K+ ++  + V   LL+ YV+ G    A  VF+ + E+D+ +W
Sbjct: 474 CTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSW 533

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + +++ YA+  + E A++ +R +  E  +PN+ T ++ ++ C+   A +  G Q H+ +I
Sbjct: 534 TVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCS-DLACLGSGLQLHSYTI 592

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K+  N+++ VSSALV MY K GN+  A  +F      DLV WN++ICGYAQHGH  KALE
Sbjct: 593 KSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALE 651

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
            F+EM  +    D ITF+GV++AC+HAGL+DEG++YF ++ + + I PT+EHY+CMVD+ 
Sbjct: 652 AFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDIL 711

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
           ++AG L +A  +IN MP    A++W+T+L ACR              L   QP D +  +
Sbjct: 712 AKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCI 771

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
           LLSN+YA    W + A++R ++ DR VKKE G SWIE+  K + FL+ D
Sbjct: 772 LLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 275/545 (50%), Gaps = 10/545 (1%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +H   ++SG   D  +  SL+++Y +   + D R VFD M   +VV+WT+++S    
Sbjct: 79  GKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITA 138

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  L LF  M  EG+ PN F  +  L        +    QVH   +K  G     V
Sbjct: 139 AGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYV 198

Query: 217 CNALISMYLKSKMVRDA-RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
            ++L+  Y+    V  A RA+ D    R  ++WN+++  Y  +  + +    F+ +  +G
Sbjct: 199 SSSLVEAYVSCGEVDVAERALLDS-PVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESG 257

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            E+++ T  +V+K C      +  + +H  V+K G++ D  +   L+  YSKC   EDA 
Sbjct: 258 DEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAY 317

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY---SIILTAQ 392
           ++F+ + E  DVV  + MIS   ++     A + F QM+  GV+PN +T+   +I+ +  
Sbjct: 318 EVFARIDE-PDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRT 376

Query: 393 PAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             V+  + +HAHI+K+ + ++  V  A++  YVK G + +A   F+L+   DI +W+ +L
Sbjct: 377 GDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLL 436

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +G+    + E  ++I+++L  EGV  N++T+  ++  CT+    +  G Q HAC +K+  
Sbjct: 437 SGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTS-LMDLRFGCQVHACVLKSGF 495

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                VS  L+ MY + G   +A  VF R ++RD+ SW  ++  YA+    +KA+E F+ 
Sbjct: 496 QGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRS 555

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M R++   +  T    ++ C+    +  G Q     +     + +    S +VD+Y + G
Sbjct: 556 MLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSG--WNSSVVSSALVDMYVKCG 613

Query: 632 MLEKA 636
            L  A
Sbjct: 614 NLADA 618



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 193/389 (49%), Gaps = 13/389 (3%)

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           AE  RS + + ++ CA ++ LR  + LH+++L++G   D  +   L+  Y KCG++ DA 
Sbjct: 57  AEELRS-YAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADAR 115

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F  M   +DVV+WTAM+S     G    A+  F +M+ EGV PNGF  +  L A    
Sbjct: 116 SVFDGMPH-RDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVG 174

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           S      QVHA  +K        V ++L+ AYV  G +D A +       +  V+W+A+L
Sbjct: 175 SDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALL 234

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
             YA+ GD    + ++ +L   G + +++T  +V+  C     A + G+  H   IK  L
Sbjct: 235 NEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLA-KSGQAVHGLVIKRGL 293

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
                +++ L+ MYSK  + E A EVF R  + D+V  + MI  + +H    +A ++F +
Sbjct: 294 ETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQ 353

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M    ++ +  TF+G+    +  G V+  +     +V +     T      +V +Y + G
Sbjct: 354 MSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIV-KSGFSRTKGVCDAIVGMYVKTG 412

Query: 632 MLEKAMDIINRM--PFAASATVWRTVLAA 658
            ++ A+   + M  P  AS   W T+L+ 
Sbjct: 413 AVQDAILAFDLMQGPDIAS---WNTLLSG 438


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 260/770 (33%), Positives = 424/770 (55%), Gaps = 55/770 (7%)

Query: 15  TKQPP----------KSLRSPFY--SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEA 62
           T+ PP          +S++  ++  SK      D+SPQ      NR +    R +L  EA
Sbjct: 3   TRHPPFKILHRVVQQRSIQFKYFHSSKHVHQPLDQSPQTTIASLNRSMLTALRRNLSLEA 62

Query: 63  LNLFLGIRRLGLPLFGS----TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTS 118
           L+LF   ++L     G+    T++ VLK   C  D   G Q+H   + SGF   V V  S
Sbjct: 63  LDLFK--KQLQWGFVGNIDQVTVAIVLK--ACCGDSKLGCQIHAFAISSGFISHVTVPNS 118

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+++Y +    +    VF+++N  ++VSW ++LSG+ R+   D  L    RM   G+  +
Sbjct: 119 LMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS---DDALNFALRMNFTGVAFD 175

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           + T +TVL   +D        Q+H+ ++K G +    V NALI+MY +   + +AR VFD
Sbjct: 176 AVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFD 235

Query: 239 GMEDRDSITWNSMVAGYVT-NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
            M ++D ++WN+M++GY       +EA   F  M   G +L   +F   I  C   KE  
Sbjct: 236 EMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFE 295

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L RQ+HS  +K G D    +   L+  YSKC  +EDA  +F  + + ++VVSWT MIS  
Sbjct: 296 LGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIID-RNVVSWTTMISIS 354

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQPAVSPFQ-VHAHIIKTNYEKSF 413
            ++     A + F +M R+GV PN  T+  ++   T +  V   Q +H   +KT++    
Sbjct: 355 EED-----ATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSEL 409

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           +V  +L+  Y K   + ++ KVFE ++ ++I++W+++++GYAQ G  + A++ +     E
Sbjct: 410 NVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALME 469

Query: 474 GVKPNEFTFSSVINA-CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
             +PNEFTF SV+++  +A + ++  G++ H+  +K  LN    VSSAL+ MY+K+G+I 
Sbjct: 470 S-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSIC 528

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            +  VF     ++ V+W ++I  +A+HG  +  + +FK+M R+ ++ D ITF+ VITAC 
Sbjct: 529 ESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACG 588

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
             G+VD G Q F+ MV +H I P+ EHYS MVD+  RAG L++A + + ++P  A  +V 
Sbjct: 589 RKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVL 648

Query: 653 RTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
           +++L ACR              LI ++P  S  YVL+SN+YA  G W++ A++RK M +R
Sbjct: 649 QSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRER 708

Query: 699 KVKKEAGYSWIEVKNK-----TYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            V+KE G+SW++V +       + F + D  HPQS +IY   E L   +K
Sbjct: 709 GVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMK 758


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/638 (37%), Positives = 371/638 (58%), Gaps = 63/638 (9%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM-EAFETFNNMGLAGA 276
           N +I+  ++S  +  A  VF GM  +++ITWNS++ G   +   M EA + F+ +     
Sbjct: 65  NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP---- 120

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-DHNIRTGLMVAYSKCGKMEDAS 335
                TF   I L    + +   +   +Q   + + F D      ++  Y++ G+ME A 
Sbjct: 121 --EPDTFSYNIMLSCYVRNVNFEK---AQSFFDRMPFKDAASWNTMITGYARRGEMEKAR 175

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F  M E K+ VSW AMISG+++ G ++ A +FF                        V
Sbjct: 176 ELFYSMME-KNEVSWNAMISGYIECGDLEKASHFF-----------------------KV 211

Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGY 454
           +P             +     TA++  Y+K   ++ A  +F ++   K++V W+AM++GY
Sbjct: 212 APV------------RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY 259

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            +    E  +K++R +  EG++PN    SS +  C+  SA ++ G+Q H    K+ L N 
Sbjct: 260 VENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSA-LQLGRQIHQIVSKSTLCND 318

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           +   ++L++MY K G +  A ++F+  +K+D+V+WN+MI GYAQHG+  KAL +F+EM  
Sbjct: 319 VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 378

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  D ITF+ V+ AC HAGLV+ G  YF+ MV ++ + P  +HY+CMVDL  RAG LE
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A+ +I  MPF   A V+ T+L ACR              L+ L   ++A YV L+N+YA
Sbjct: 439 EALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYA 498

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           +   W++ ARVRK M +  V K  GYSWIE++NK + F + D  HP+ + I+ KL+EL  
Sbjct: 499 SKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEK 558

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           ++K AGYKP+  + L ++++E KE +L  HSE+LA+AFG +  P G+ +Q+ KNLR+CGD
Sbjct: 559 KMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGD 618

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH  IK IS++E+R+I+VRDT RFHHFK+G CSCGDYW
Sbjct: 619 CHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 201/430 (46%), Gaps = 41/430 (9%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           ++  Y+R  N E  +  FD M   +  SW ++++GYAR    ++  ELF+ M    ++ N
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKN 185

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
             +++ ++    + G +  A     +    G    T    A+I+ Y+K+K V  A A+F 
Sbjct: 186 EVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWT----AMITGYMKAKKVELAEAMFK 241

Query: 239 GME-DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
            M  +++ +TWN+M++GYV N    +  + F  M   G     S   S +  C+    L+
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L RQ+H  V K+ +  D    T L+  Y KCG++ DA K+F +M++ KDVV+W AMISG+
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK-KDVVAWNAMISGY 360

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT 417
            Q+G  D A+  F +M    +RP+  T+  +L A                N+    ++G 
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLA---------------CNHAGLVNIGM 405

Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
           A   + V+          +++  + D   ++ M+    + G  E A+K+ R +     +P
Sbjct: 406 AYFESMVRD---------YKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMP---FRP 451

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           +   F +++ AC        +  +F A  +    +        L  +Y+ K   E  + V
Sbjct: 452 HAAVFGTLLGACRVHKNV--ELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 509

Query: 538 FKRQRKRDLV 547
            KR ++ ++V
Sbjct: 510 RKRMKESNVV 519



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 149/323 (46%), Gaps = 26/323 (8%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K QS FDR P ++   +N ++  Y R    ++A  LF  +       + + +S  ++ C
Sbjct: 141 EKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIE-C 199

Query: 89  GCL--FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVV 145
           G L    H F         K    R V   T+++  YM+   VE    +F DM    N+V
Sbjct: 200 GDLEKASHFF---------KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +W +++SGY  N   +  L+LF  M  EGI+PNS   S+ L   ++   +    Q+H +V
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310

Query: 206 IKNGGEVVTSVCN------ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            K      +++CN      +LISMY K   + DA  +F+ M+ +D + WN+M++GY  + 
Sbjct: 311 SK------STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIR 318
              +A   F  M          TFV+V+  C     + +      S V    ++   +  
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424

Query: 319 TGLMVAYSKCGKMEDASKIFSMM 341
           T ++    + GK+E+A K+   M
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSM 447


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 240/705 (34%), Positives = 388/705 (55%), Gaps = 52/705 (7%)

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL-ISMYLKSKMVRDARAVFDGMED 242
           T+   L+    +    QVH  ++++  +  TS+   L IS    S  +  A +VF+ +  
Sbjct: 25  TLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPK 84

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
            ++   N  +     +E   +    +  M   G  + R +F  ++K  +  K L    ++
Sbjct: 85  PETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEI 144

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H    K G D D  ++TGL+  Y+ CG++ +A  +F  M   +DVV+W+ MI G+ Q+G 
Sbjct: 145 HGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFH-RDVVTWSIMIDGYCQSGL 203

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY--------- 409
            + A+  F +M    V P+    S +L+A            +H  I++ N          
Sbjct: 204 FNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSA 263

Query: 410 ----------------------EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
                                  K+    TA++  Y K G ++ A  VF  + +KD+V W
Sbjct: 264 LVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCW 323

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           SAM++GYA+    + A+ ++ ++ S G+KP++ T  SVI AC A   A++Q K  H    
Sbjct: 324 SAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITAC-AHLGALDQAKWIHLFVD 382

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K     AL +++AL+ MY+K G++E A  +F +  +++++SW  MI  +A HG    AL 
Sbjct: 383 KNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALR 442

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
            F +M  +++E +GITF+GV+ AC+HAGLV+EG++ F  M+NEH+I P   HY CMVDL+
Sbjct: 443 FFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLF 502

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            RA +L +A++++  MP A +  +W +++AACR              L+ L P     +V
Sbjct: 503 GRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHV 562

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
            LSN+YA    W++  +VRKLM  + + KE G S  E+ N+ + FL  D SH  +++IY 
Sbjct: 563 FLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYE 622

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           KL E+ ++LK  GY P+T  +L D+++E K+ ++  HSE+LA+ +GL+    G+ ++I+K
Sbjct: 623 KLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIK 682

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVC DCHT IKL SK+  R+IVVRD  RFHH+K+G+CSC DYW
Sbjct: 683 NLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 215/466 (46%), Gaps = 38/466 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+  P+      NR L E  R    ++ L ++  +R  GL +   +   +LK    + 
Sbjct: 77  SVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVK 136

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
             V G ++H    K GF  D  V T LV +Y     + + R +FD M   +VV+W+ ++ 
Sbjct: 137 SLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMID 196

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY ++ + +  L LF  M+   ++P+    STVL      G ++    +H  +++N   V
Sbjct: 197 GYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVV 256

Query: 213 VTSVCNALISMY-----------LKSKM--------------------VRDARAVFDGME 241
              + +AL++MY           L  KM                    + +AR+VF+ M 
Sbjct: 257 DPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMV 316

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D + W++M++GY  ++   EA   FN M   G +  + T +SVI  CA    L  A+ 
Sbjct: 317 KKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKW 376

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H  V KNG      I   L+  Y+KCG +E A +IF  M   K+V+SWT MIS    +G
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPR-KNVISWTCMISAFAMHG 435

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVG 416
               A+ FF QM  E + PNG T+  +L A       +      ++ I + N        
Sbjct: 436 DAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHY 495

Query: 417 TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
             +++ + +  +L EA ++ E +    +++ W +++A     G+ E
Sbjct: 496 GCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIE 541



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 169/366 (46%), Gaps = 34/366 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+   R+ V ++ ++  YC+  L  +AL LF  ++   +      LS+VL  CG   +
Sbjct: 179 MFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGN 238

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYM----------------------------- 124
             +G+ +H   +++    D ++ ++LV +Y                              
Sbjct: 239 LSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTG 298

Query: 125 --RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
             +   +E+ R VF+ M + ++V W++++SGYA +      L LF+ MQ  GIKP+  T 
Sbjct: 299 YSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTM 358

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
            +V+   A  G +  A  +H  V KNG      + NALI MY K   +  AR +FD M  
Sbjct: 359 LSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPR 418

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           ++ I+W  M++ +  +     A   F+ M     E    TFV V+  C+    +   R++
Sbjct: 419 KNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKI 478

Query: 303 -HSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +S + ++ I   H +  G MV  + +   + +A ++   M    +V+ W ++++    +
Sbjct: 479 FYSMINEHNITPKH-VHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVH 537

Query: 361 GAIDLA 366
           G I+L 
Sbjct: 538 GEIELG 543



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 128/256 (50%), Gaps = 12/256 (4%)

Query: 11  INPQTKQPPKSLRSPF-----YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQ 60
           +N   K  PK+L +       YSK  Q     S+F++  +++ V ++ ++  Y      Q
Sbjct: 278 LNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQ 337

Query: 61  EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLV 120
           EALNLF  ++ LG+     T+ SV+  C  L      + +H    K+GF   + ++ +L+
Sbjct: 338 EALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALI 397

Query: 121 DLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
           ++Y +  ++E  RR+FD M   NV+SWT ++S +A +      L  FH+M+ E I+PN  
Sbjct: 398 EMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGI 457

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV-CNALISMYLKSKMVRDARAVFDG 239
           TF  VL   +  G+V    ++   +I         V    ++ ++ ++ ++R+A  + + 
Sbjct: 458 TFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEA 517

Query: 240 ME-DRDSITWNSMVAG 254
           M    + I W S++A 
Sbjct: 518 MPLAPNVIIWGSLMAA 533


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/584 (39%), Positives = 344/584 (58%), Gaps = 26/584 (4%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T+ TF  +I  CA    L     +H  ++ +G D D  + T L+  Y + G ++ A K+F
Sbjct: 77  TQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVF 136

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPA 394
              RE + +  W A+       G     ++ + QM   G   + FTY+ +L A    + +
Sbjct: 137 DETRE-RTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           V P     ++HAHI++  YE +  V T LL+ Y K G +  A  VF  +  K+ V+WSAM
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAM 255

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVK--PNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +A +A+      A+++++ +  E     PN  T  +++ AC A  AA+EQGK  H   ++
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQAC-AGLAALEQGKLIHGYILR 314

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            +L++ L V +AL+TMY + G +     VF   +KRD+VSWNS+I  Y  HG  KKA+++
Sbjct: 315 RQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQI 374

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+ M  Q +    I+FI V+ AC+HAGLV+EG+  F+ M++++ I+P MEHY+CMVDL  
Sbjct: 375 FENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 434

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RA  L +A+ +I  M F    TVW ++L +CR              L  L+P ++  YVL
Sbjct: 435 RANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVL 494

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+++YA    W E   V KL+  R ++K  G SWIEVK K YSF++ D  +PQ  +I++ 
Sbjct: 495 LADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHAL 554

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L +LS  +K  GY P T+ VL D+D+E KE I+  HSE+LA+AFGL+ T  G  ++I KN
Sbjct: 555 LVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKN 614

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR+C DCH V K ISK   R+I+VRD NRFHHF++G+CSCGDYW
Sbjct: 615 LRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 155/318 (48%), Gaps = 7/318 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   ++ +C       +G  VH   V SGF +D  ++T L+++Y    +++   +VFD+ 
Sbjct: 80  TFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVFDET 139

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E  +  W +L    A       +L+L+ +M   G   + FT++ VL       +    +
Sbjct: 140 RERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPL 199

Query: 200 ----QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
               ++H  ++++G E    V   L+ +Y K   V  A +VF  M  ++ ++W++M+A +
Sbjct: 200 RKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACF 259

Query: 256 VTNELHMEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
             NE+ M+A E F  M         +  T V++++ CA    L   + +H  +L+  +D 
Sbjct: 260 AKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDS 319

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
              +   L+  Y +CG++    ++F  M++ +DVVSW ++IS +  +G    A+  F  M
Sbjct: 320 ILPVLNALITMYGRCGEVLMGQRVFDNMKK-RDVVSWNSLISIYGMHGFGKKAIQIFENM 378

Query: 374 TREGVRPNGFTYSIILTA 391
             +GV P+  ++  +L A
Sbjct: 379 IHQGVSPSYISFITVLGA 396



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 164/334 (49%), Gaps = 12/334 (3%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P   TF  ++   A +  ++  + VH  ++ +G +    +   LI+MY +   +  A  V
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK-- 294
           FD   +R    WN++           E  + +  M   G    R T+  V+K C  ++  
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 295 --ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              LR  +++H+ +L++G + + ++ T L+  Y+K G +  A+ +F  M   K+ VSW+A
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAM-PTKNFVSWSA 254

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVR--PNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
           MI+   +N     A+  F  M  E     PN  T   +L A   ++  +    +H +I++
Sbjct: 255 MIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILR 314

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
              +    V  AL+  Y + G +    +VF+ + ++D+V+W+++++ Y   G  + A++I
Sbjct: 315 RQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQI 374

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           +  +  +GV P+  +F +V+ AC+  +  VE+GK
Sbjct: 375 FENMIHQGVSPSYISFITVLGACSH-AGLVEEGK 407



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 10/266 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG---- 89
           +FD + +R    +N L          +E L+L++ +  +G P    T + VLK C     
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSEL 194

Query: 90  --CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             C      G+++H   ++ G+  +++V T+L+D+Y +  +V     VF  M   N VSW
Sbjct: 195 SVCPLRK--GKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSW 252

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIK--PNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +++++ +A+N+M  + LELF  M  E     PNS T   +L   A    +     +H  +
Sbjct: 253 SAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYI 312

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           ++   + +  V NALI+MY +   V   + VFD M+ RD ++WNS+++ Y  +    +A 
Sbjct: 313 LRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAI 372

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCA 291
           + F NM   G   +  +F++V+  C+
Sbjct: 373 QIFENMIHQGVSPSYISFITVLGACS 398



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 14/171 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--------TLSSV 84
           S+F   P +NFV ++ ++  + ++ +  +AL LF       L +F +        T+ ++
Sbjct: 239 SVFCAMPTKNFVSWSAMIACFAKNEMPMKALELF------QLMMFEACNSVPNSVTMVNM 292

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L+ C  L     G+ +H   ++      + V  +L+ +Y R   V  G+RVFD+M + +V
Sbjct: 293 LQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDV 352

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           VSW SL+S Y  +    + +++F  M  +G+ P+  +F TVLG  +  G+V
Sbjct: 353 VSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLV 403


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/685 (34%), Positives = 367/685 (53%), Gaps = 46/685 (6%)

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT-MVIKNGGEVVTSVCNALISMYLKS 227
           R++ + +K   F+      +L     + T  ++H+ +VI     +  ++   L+  Y   
Sbjct: 25  RIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQ 84

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
                AR +FD   +++ + +N M+  YV N L++EA   F  M          TF  V+
Sbjct: 85  GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVL 144

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           K C+    LR+  Q+H  ++K G+D +  I   L+  Y KCG + +A K+   M   +DV
Sbjct: 145 KACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM-PYRDV 203

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
           VSW +M++G+ Q+G  D A+    +M    +  +  T +       ++SP   +  +   
Sbjct: 204 VSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA-------SLSPVVCYTSLENV 256

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
            Y                         +FE + +K++++W+ M+A Y        AV ++
Sbjct: 257 QY----------------------IHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLF 294

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
            Q+   G+KP+  T +S++ AC   SA +  G++ H    K  L   L + +AL+ MY+K
Sbjct: 295 LQMEECGMKPDAVTIASLLPACGDLSA-LFLGRRLHKYIEKGNLQPNLLLENALLDMYAK 353

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +E A +VF + R RD+VSW SM+  Y + G    A+ +F +M       D I F+ V
Sbjct: 354 CGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSV 413

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           ++AC+H GL+D+G+ YF +M  ++ I P +EH++CMVDL+ RAG +E+A   I +MP   
Sbjct: 414 LSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEP 473

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           +  VW  +L+ACR              L  L P  S  YVLLSN+YA  G W++   VR 
Sbjct: 474 NERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRY 533

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
            M    +KK  G S +E+  + ++FLAGD  HPQ+  IY +L+ L  ++K+ GY P T  
Sbjct: 534 AMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTES 593

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
            L D++ E KE  L+ HSE+LAI F ++ T  G P++I KNLRVCGDCH  IKLISK+  
Sbjct: 594 ALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVS 653

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+I+VRD NRFHHF  G+CSCGDYW
Sbjct: 654 RNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 207/441 (46%), Gaps = 54/441 (12%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D  ++  L+  Y         R +FD   E NVV +  ++  Y  N +    L +F  M 
Sbjct: 70  DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
                P+ +TF  VL   +    +   +QVH  ++K G +    + NAL++MY K   +R
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +AR V D M  RD ++WNSMVAGY  +                        F   +++C 
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQS----------------------GQFDDALEIC- 226

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKMEDASKIFSMMREM--KDVV 348
             KE+            + ++ +H+  T   ++   C   +E+   I +M   M  K+++
Sbjct: 227 --KEM------------DSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLI 272

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           SW  MI+ ++ N   + AV+ F QM   G++P+  T + +L A   +S      ++H +I
Sbjct: 273 SWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYI 332

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
            K N + +  +  ALL+ Y K G L+EA  VF+ +  +D+V+W++M++ Y + G    AV
Sbjct: 333 EKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAV 392

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HACSIKAKLNNALCVSS 519
            ++ ++   G  P+   F SV++AC+  +  ++QG+ +         I  ++ +  C   
Sbjct: 393 ALFAKMLDSGQNPDSIAFVSVLSACSH-TGLLDQGRHYFRMMTEQYGIVPRIEHFAC--- 448

Query: 520 ALVTMYSKKGNIESASEVFKR 540
            +V ++ + G +E A    K+
Sbjct: 449 -MVDLFGRAGEVEEAYSFIKQ 468



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 208/465 (44%), Gaps = 73/465 (15%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDRS ++N V +N ++  Y  ++L+ EAL++F  +          T   VLK C  L +
Sbjct: 93  IFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDN 152

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G QVH   VK G   ++ +  +LV +Y +   + + R+V D M   +VVSW S+++G
Sbjct: 153 LRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAG 212

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA++   D  LE+   M               L +  D G +A+   V            
Sbjct: 213 YAQSGQFDDALEICKEMD-------------SLNLNHDAGTMASLSPV------------ 247

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             VC      Y   + V+    +F+ M  ++ I+WN M+A YV N +  EA   F  M  
Sbjct: 248 --VC------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEE 299

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +    T  S++  C     L L R+LH  + K  +  +  +   L+  Y+KCG +E+
Sbjct: 300 CGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEE 359

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F  MR ++DVVSWT+M+S + ++G    AV  F +M   G  P+   +        
Sbjct: 360 ARDVFDKMR-LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAF-------- 410

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----DIVAWS 448
                                   ++L+A    G+LD+    F ++ E+      I  ++
Sbjct: 411 -----------------------VSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA 447

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            M+  + + G+ E A    +Q+  E   PNE  + ++++AC   S
Sbjct: 448 CMVDLFGRAGEVEEAYSFIKQMPME---PNERVWGALLSACRVHS 489



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 95/181 (52%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            ++F+R  ++N + +N ++  Y  +S+  EA++LFL +   G+     T++S+L  CG L
Sbjct: 260 HNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDL 319

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR++H    K     ++ +  +L+D+Y +   +E+ R VFD M   +VVSWTS++
Sbjct: 320 SALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMM 379

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y R+      + LF +M   G  P+S  F +VL   +  G++        M+ +  G 
Sbjct: 380 SAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGI 439

Query: 212 V 212
           V
Sbjct: 440 V 440


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/621 (37%), Positives = 367/621 (59%), Gaps = 21/621 (3%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A+ +F  +++     +NS++    +++  +EA   ++ M  +G +    T+  VIK C  
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           +        +H+ V+K+G + D  I + L+  Y+    +  A ++F++    +DVVSW A
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC-SARDVVSWNA 266

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           MI G++++  +  A   F +M    V     +++ ++     V        +     E++
Sbjct: 267 MIDGYVKHVEMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPERN 322

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
                ++L  +VK G +++A  +F  +  +D+V+W++MLA YAQ G    A+ ++ Q+ +
Sbjct: 323 LVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRA 382

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
            GVKP E T  S+++AC A   A+++G   H      ++     V +ALV MY+K G I 
Sbjct: 383 VGVKPTEATVVSLLSAC-AHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKIS 441

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            A++VF     +D+++WN++I G A HG+ K+A ++FKEM+   +E + ITF+ +++AC+
Sbjct: 442 LATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACS 501

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVW 652
           HAG+VDEGQ+  D M + + I P +EHY C++DL +RAG LE+AM++I  MP   + +  
Sbjct: 502 HAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSAL 561

Query: 653 RTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDR 698
             +L  C              RLI+LQP  S  Y+LLSN+YAA   W +  +VR LM   
Sbjct: 562 GALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVN 621

Query: 699 KVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA-GYKPDTSYVLQD 757
            + K  G S IE+K   + F+AGD SHP+SN+IY KL E+ TRLK A GY  DT  VL D
Sbjct: 622 GISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLD 681

Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
           +++E KE  L+ HSE+LAIA+GL+   +   ++IVKNLRVC DCH VIKLISK+  R+I+
Sbjct: 682 MEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREII 741

Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
           VRD NRFHHF++G CSC D+W
Sbjct: 742 VRDRNRFHHFEDGECSCLDFW 762



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 213/415 (51%), Gaps = 23/415 (5%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           + +F  +       + SL+   + +K     L L+H M   G+KP+  T+  V+    + 
Sbjct: 149 KTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNES 208

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
            +    + VHT V+K+G E  + + ++LI +Y   K +  A+ +F+    RD ++WN+M+
Sbjct: 209 SVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMI 268

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            GYV +     A   F+ M +    ++ +T ++   +     E +  R       +N + 
Sbjct: 269 DGYVKHVEMGHARMVFDRM-VCRDVISWNTMINGYAIVGKIDEAK--RLFDEMPERNLVS 325

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
           ++      ++  + KCG +EDA  +FS M   +DVVSW +M++ + Q G  + A+  F Q
Sbjct: 326 WN-----SMLAGFVKCGNVEDAFGLFSEM-PCRDVVSWNSMLACYAQCGKPNEALALFDQ 379

Query: 373 MTREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M   GV+P   T   +L+A   +        +H +I     E +  VGTAL++ Y K G 
Sbjct: 380 MRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGK 439

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           +  A +VF  ++ KD++AW+ ++AG A  G+ + A ++++++   GV+PN+ TF ++++A
Sbjct: 440 ISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSA 499

Query: 489 CTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           C+  +  V++G++   C      I+ K+ +  CV    + + ++ G +E A E+ 
Sbjct: 500 CSH-AGMVDEGQKLLDCMSSSYGIEPKVEHYGCV----IDLLARAGFLEEAMELI 549



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 227/498 (45%), Gaps = 40/498 (8%)

Query: 4   SPALKSLINP-----QTKQPPKSL----RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYC 54
           +P + SL NP       KQ    +     SPF      SL   SP   F+ Y + +F + 
Sbjct: 96  NPQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHL 155

Query: 55  RD---SLHQ-------------EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           ++   SL+              EAL L+  + + GL     T   V+K C       FG 
Sbjct: 156 QNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGL 215

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
            VH   VKSGF  D  + +SL+ LY    ++   +++F+  +  +VVSW +++ GY ++ 
Sbjct: 216 LVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHV 275

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                  +F RM    +     +++T++   A  G +  A +    +     E      N
Sbjct: 276 EMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKR----LFDEMPERNLVSWN 327

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           ++++ ++K   V DA  +F  M  RD ++WNSM+A Y       EA   F+ M   G + 
Sbjct: 328 SMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKP 387

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T +T VS++  CA    L     LH+ +  N I+ +  + T L+  Y+KCGK+  A+++F
Sbjct: 388 TEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVF 447

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAV 395
           + M E KDV++W  +I+G   +G +  A   F +M   GV PN  T+  IL+A      V
Sbjct: 448 NAM-ESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMV 506

Query: 396 SPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLA 452
              Q     + ++Y  E        +++   + G L+EA ++   +  E +  A  A+L 
Sbjct: 507 DEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLG 566

Query: 453 GYAQIGDTEGAVKIYRQL 470
           G    G+ E    + ++L
Sbjct: 567 GCRIHGNFELGEMVGKRL 584


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/684 (34%), Positives = 372/684 (54%), Gaps = 23/684 (3%)

Query: 98  RQVHCECVKSGFA-RDVNV-STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           + VH   +KS F  +D+ V       +Y + +       VFD+M + NV SWT ++ G  
Sbjct: 138 KAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGST 197

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            + +     + F  M   GI P+ F +S ++        +     VH  ++  G      
Sbjct: 198 EHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIF 257

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V  +L++MY K   + D+  VF+ M + + ++WN+M++G  +N LH+EAF+ F  M    
Sbjct: 258 VSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGA 317

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 T VSV K      ++ + +++ +   + GI+ +  + T L+  YSKCG + DA 
Sbjct: 318 CTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDAR 377

Query: 336 KIFSMMREMKDV-VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            +F        V   W AMISG+ Q+G    A+  + QM + G+  + +TY  +  A  A
Sbjct: 378 SVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAA 437

Query: 395 VSPFQ----VHAHIIKTNYE-KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
               Q    VH  ++K   +    SV  A+ +AY K G L++  KVF+ ++E+DIV+W+ 
Sbjct: 438 SKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTT 497

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++  Y+Q    E A+  +  +  EG  PN+FTFSSV+ +C A    +E G+Q H    KA
Sbjct: 498 LVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC-ASLCFLEYGRQVHGLLCKA 556

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L+   C+ SAL+ MY+K G+I  A +VF +    D+VSW ++I GYAQHG  + AL++F
Sbjct: 557 GLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLF 616

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           + M    ++ + +T + V+ AC+H G+V+EG  YF  M + + + P MEHY+C++DL  R
Sbjct: 617 RRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGR 676

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
            G L+ AM+ I +MP   +  VW+T+L  CR              ++S++P  SA YVLL
Sbjct: 677 VGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLL 736

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN Y  TG +++   +R +M D+ VKKE GYSWI VK + + F +GD  HPQ  +IY KL
Sbjct: 737 SNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKL 796

Query: 736 EELSTRLKDAGYKPDTSYVLQDID 759
           EEL  ++K  GY PD  YVL + D
Sbjct: 797 EELREKIKAMGYVPDLRYVLNNAD 820



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 276/546 (50%), Gaps = 25/546 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  PQRN   +  ++       L  +    F  +   G+       S+++++C  L  
Sbjct: 177 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 236

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ VH + V  GFA  + VSTSL+++Y +  ++ED   VF+ M E N VSW +++SG
Sbjct: 237 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 296

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTV---LGVLADEGIVATAVQVHTMVIKNGG 210
              N ++    +LF RM+     PN +T  +V   +G L D   V    +V     + G 
Sbjct: 297 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVD---VNMGKEVQNCASELGI 353

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETF 268
           E    V  ALI MY K   + DAR+VFD   +    +  WN+M++GY  +    EA E +
Sbjct: 354 EGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELY 413

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-DHNIRTGLMVAYSK 327
             M   G      T+ SV    A +K L+  R +H  VLK G+D    ++   +  AYSK
Sbjct: 414 VQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSK 473

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +ED  K+F  M E +D+VSWT +++ + Q+   + A+  FC M  EG  PN FT+S 
Sbjct: 474 CGFLEDVRKVFDRMEE-RDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSS 532

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L +  ++       QVH  + K   +    + +AL++ Y K G + EA KVF+ I   D
Sbjct: 533 VLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPD 592

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           IV+W+A+++GYAQ G  E A++++R++   G+K N  T   V+ AC+     VE+G  + 
Sbjct: 593 IVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS-HGGMVEEGLFYF 651

Query: 504 -----ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYA 557
                   +  ++ +  C+    + +  + G ++ A E  ++   + + + W +++ G  
Sbjct: 652 QQMEDGYGVVPEMEHYACI----IDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCR 707

Query: 558 QHGHTK 563
            HG+ +
Sbjct: 708 VHGNVE 713



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 97/164 (59%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR  +R+ V +  L+  Y + SL +EAL  F  +R  G      T SSVL +C  L
Sbjct: 481 RKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASL 540

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +GRQVH    K+G   +  + ++L+D+Y +  ++ +  +VFD ++  ++VSWT+++
Sbjct: 541 CFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAII 600

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           SGYA++ + +  L+LF RM++ GIK N+ T   VL   +  G+V
Sbjct: 601 SGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMV 644


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/658 (36%), Positives = 359/658 (54%), Gaps = 23/658 (3%)

Query: 202 HTMVIKNGGEVVTS-VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           H  +IK     + S + N L++MY K      A+ +     +R  +TW +++AG V N  
Sbjct: 29  HAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGR 88

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
              A   F+NM     +    TF    K   + +   + +Q+H+  +K G   D  +   
Sbjct: 89  FTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCS 148

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
               YSK G  E+A K+F  M E +++ +W A +S  +  G  D A+  F +   EG  P
Sbjct: 149 AFDMYSKAGLTEEARKMFDEMPE-RNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEP 207

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N  T+   L A    S      Q+H  ++++ +E   SV   L++ Y K   +  +  +F
Sbjct: 208 NLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIF 267

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             I + + V+W +M+  Y Q  + E A  ++ +   EG++P +F  SSV++AC   S  +
Sbjct: 268 SGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSV-L 326

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E GK  H  ++KA +   + V SALV MY K G+IE A   F    +R+LV+WN+MI GY
Sbjct: 327 EVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGY 386

Query: 557 AQHGHTKKALEVFKEMR--RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           A  G    A+ +F EM      +  + +TF+ V++AC+ AG V+ G + F+ M   + I 
Sbjct: 387 AHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIE 446

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           P  EHY+C+VDL  RAGM+E+A   I +MP   + +VW  +L A +              
Sbjct: 447 PGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADN 506

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L  L P DS  +VLLSNM+AA G W+E   VRK M D  +KK AG SWI   N  + F A
Sbjct: 507 LFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQA 566

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
            D SH ++++I + L +L   ++ AGY PDTS+ L D+++E K   +  HSE++A+AFGL
Sbjct: 567 KDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGL 626

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++ PAG P++I KNLR+CGDCH+ IK IS +  R+I+VRD N FH F++  CSC DYW
Sbjct: 627 ISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 230/491 (46%), Gaps = 39/491 (7%)

Query: 96  FGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            GR  H + +K+        +   LV++Y + +     + +       +VV+WT+L++G 
Sbjct: 24  LGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +N      L  F  M+ + I+PN FTF                 QVH + +K G     
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  +   MY K+ +  +AR +FD M +R+  TWN+ ++  V    + +A   F      
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHE 203

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G E    TF + +  CA    LRL RQLH  VL++G + D ++  GL+  Y KC ++  +
Sbjct: 204 GWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCS 263

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             IFS + +  D VSW +MI  ++QN   + A   F +  +EG+ P  F  S +L+A   
Sbjct: 264 EIIFSGISKPND-VSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAG 322

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +S  +    VH   +K     +  VG+AL++ Y K G +++A + F+ + E+++V W+AM
Sbjct: 323 LSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAM 382

Query: 451 LAGYAQIGDTEGAVKIYRQLT--SEGVKPNEFTFSSVINACTAPSA-------------- 494
           + GYA  G  + AV ++ ++T  S  V PN  TF  V++AC+   +              
Sbjct: 383 IGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGR 442

Query: 495 -AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSM 552
             +E G + +AC               +V +  + G +E A +  K+   R  VS W ++
Sbjct: 443 YGIEPGAEHYAC---------------VVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGAL 487

Query: 553 ICGYAQHGHTK 563
           +      G ++
Sbjct: 488 LGASKMFGKSE 498



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 211/468 (45%), Gaps = 15/468 (3%)

Query: 7   LKSLINPQTKQPPKSLRSPFYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQE 61
           +K+L NP        L +  YSK D     Q L   +P R+ V +  L+    ++     
Sbjct: 33  IKTLDNPLPSFIYNHLVN-MYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTS 91

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           AL  F  +RR  +     T     K  G L   + G+QVH   VK+G   DV V  S  D
Sbjct: 92  ALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFD 151

Query: 122 LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
           +Y +    E+ R++FD+M E N+ +W + LS        D  L  F   + EG +PN  T
Sbjct: 152 MYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLIT 211

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F   L   A    +    Q+H  V+++G E   SV N LI  Y K   V  +  +F G+ 
Sbjct: 212 FCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS 271

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
             + ++W SM+  YV N+   +A   F      G E T     SV+  CA    L + + 
Sbjct: 272 KPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKS 331

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H+  +K  +  +  + + L+  Y KCG +EDA + F  M E +++V+W AMI G+   G
Sbjct: 332 VHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPE-RNLVTWNAMIGGYAHQG 390

Query: 362 AIDLAVNFFCQMT--REGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT-----NYEKSFS 414
             D+AV  F +MT     V PN  T+  +L+A        V   I ++       E    
Sbjct: 391 QADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAE 450

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVA-WSAMLAGYAQIGDTE 461
               +++   + G++++A +  + +  +  V+ W A+L      G +E
Sbjct: 451 HYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 498


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 236/685 (34%), Positives = 367/685 (53%), Gaps = 46/685 (6%)

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT-MVIKNGGEVVTSVCNALISMYLKS 227
           R++ + +K   F+      +L     + T  ++H+ +VI     +  ++   L+  Y   
Sbjct: 25  RIRFDRLKVEVFSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQ 84

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
                AR +FD   +++ + +N M+  YV N L++EA   F  M          TF  V+
Sbjct: 85  GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVL 144

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           K C+    LR+  Q+H  ++K G+D +  I   L+  Y KCG + +A K+   M   +DV
Sbjct: 145 KACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM-PYRDV 203

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
           VSW +M++G+ Q+G  D A+    +M    +  +  T +       ++SP   +  +   
Sbjct: 204 VSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMA-------SLSPVVCYTSLENV 256

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
            Y                         +FE + +K++++W+ M+A Y        AV ++
Sbjct: 257 QY----------------------IHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLF 294

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
            Q+   G+KP+  T +S++ AC   SA +  G++ H    K  L   L + +AL+ MY+K
Sbjct: 295 LQMEECGMKPDAVTIASLLPACGDLSA-LFLGRRLHKYIEKGNLRPNLLLENALLDMYAK 353

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +E A +VF + R RD+VSW SM+  Y + G    A+ +F +M       D I F+ V
Sbjct: 354 CGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSV 413

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           ++AC+H GL+D+G+ YF +M  ++ I P +EH++CMVDL+ RAG +E+A   I +MP   
Sbjct: 414 LSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEP 473

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           +  VW  +L+ACR              L  L P  S  YVLLSN+YA  G W++   VR 
Sbjct: 474 NERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRY 533

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
            M    +KK  G S +E+  + ++FLAGD  HPQ+  IY +L+ L  ++K+ GY P T  
Sbjct: 534 AMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTES 593

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
            L D++ E KE  L+ HSE+LAI F ++ T  G P++I KNLRVCGDCH  IKLISK+  
Sbjct: 594 ALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVS 653

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+I+VRD NRFHHF  G+CSCGDYW
Sbjct: 654 RNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 206/441 (46%), Gaps = 54/441 (12%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D  ++  L+  Y         R +FD   E NVV +  ++  Y  N +    L +F  M 
Sbjct: 70  DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
                P+ +TF  VL   +    +   +QVH  ++K G +    + NAL++MY K   +R
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLR 189

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +AR V D M  RD ++WNSMVAGY  +                        F   +++C 
Sbjct: 190 EARKVLDQMPYRDVVSWNSMVAGYAQS----------------------GQFDDALEIC- 226

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKMEDASKIFSMMREM--KDVV 348
             KE+            + ++ +H+  T   ++   C   +E+   I +M   M  K+++
Sbjct: 227 --KEM------------DSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLI 272

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           SW  MI+ ++ N   + AV+ F QM   G++P+  T + +L A   +S      ++H +I
Sbjct: 273 SWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYI 332

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
            K N   +  +  ALL+ Y K G L+EA  VF+ +  +D+V+W++M++ Y + G    AV
Sbjct: 333 EKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAV 392

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HACSIKAKLNNALCVSS 519
            ++ ++   G  P+   F SV++AC+  +  ++QG+ +         I  ++ +  C   
Sbjct: 393 ALFAKMLDSGQNPDSIAFVSVLSACSH-TGLLDQGRHYFRMMTEQYGIVPRIEHFAC--- 448

Query: 520 ALVTMYSKKGNIESASEVFKR 540
            +V ++ + G +E A    K+
Sbjct: 449 -MVDLFGRAGEVEEAYSFIKQ 468



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 208/465 (44%), Gaps = 73/465 (15%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FDRS ++N V +N ++  Y  ++L+ EAL++F  +          T   VLK C  L +
Sbjct: 93  IFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDN 152

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G QVH   VK G   ++ +  +LV +Y +   + + R+V D M   +VVSW S+++G
Sbjct: 153 LRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAG 212

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA++   D  LE+   M               L +  D G +A+   V            
Sbjct: 213 YAQSGQFDDALEICKEMD-------------SLNLNHDAGTMASLSPV------------ 247

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             VC      Y   + V+    +F+ M  ++ I+WN M+A YV N +  EA   F  M  
Sbjct: 248 --VC------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEE 299

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +    T  S++  C     L L R+LH  + K  +  +  +   L+  Y+KCG +E+
Sbjct: 300 CGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEE 359

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F  MR ++DVVSWT+M+S + ++G    AV  F +M   G  P+   +        
Sbjct: 360 ARDVFDKMR-LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAF-------- 410

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----DIVAWS 448
                                   ++L+A    G+LD+    F ++ E+      I  ++
Sbjct: 411 -----------------------VSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA 447

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            M+  + + G+ E A    +Q+  E   PNE  + ++++AC   S
Sbjct: 448 CMVDLFGRAGEVEEAYSFIKQMPME---PNERVWGALLSACRVHS 489



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 95/181 (52%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            ++F+R  ++N + +N ++  Y  +S+  EA++LFL +   G+     T++S+L  CG L
Sbjct: 260 HNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDL 319

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR++H    K     ++ +  +L+D+Y +   +E+ R VFD M   +VVSWTS++
Sbjct: 320 SALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMM 379

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y R+      + LF +M   G  P+S  F +VL   +  G++        M+ +  G 
Sbjct: 380 SAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGI 439

Query: 212 V 212
           V
Sbjct: 440 V 440


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/577 (38%), Positives = 345/577 (59%), Gaps = 20/577 (3%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           ST+V ++K CA +K L   +++HS ++K+G   D  I   L+  Y KCG + +A  +F  
Sbjct: 25  STYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84

Query: 341 MREMK-DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
           ++E   DV+SW  +I  + QNG    A++ F  M  EGV  N  T    + A  ++   +
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 400 ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
               VHA  +    E    VGT+L+N + K   +D A  VF+ +  K++V W+ M+A Y+
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q    + A++++R +  EGV+P+  TF ++I+AC A +A  E G+  H     + +   +
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTE-GRMVHDDITASGIPMDV 263

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            + +A++  Y K G +++A  +F    K++ V+W++++  YAQ+G+  +A+E++ EM + 
Sbjct: 264 ALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQG 323

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            LE +GITF+G++ AC+HAG   +G  YF  M+ +  + P  EHY  ++DL  R+G L+ 
Sbjct: 324 GLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQL 383

Query: 636 AMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAA 681
           + D+IN MP+   ++ W  +L ACR+                L P DS  Y+LLSN+Y++
Sbjct: 384 SEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSS 443

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
           TG   E  R RK M  R + K+ G S IEVK++ + F+A    HPQ  +I++++E L  R
Sbjct: 444 TGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKAR 503

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +K+AGY  D   VL+D+++E KE +L  HSERLAIAFGL++TP G  L IVKNLRVC DC
Sbjct: 504 VKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDC 563

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           H  +K ISK+  R IVVRD  RFHHF+ G CSCGDYW
Sbjct: 564 HAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 187/404 (46%), Gaps = 40/404 (9%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           ST   +LK C      + G++VH   VK G+A D  ++  L+++Y +   + + R VFD 
Sbjct: 25  STYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84

Query: 139 MNESN--VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           + E N  V+SW  ++  Y +N +    L LF  M +EG+  N  T    +   A      
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
               VH + +    E  T V  +L++M+ K K V  ARAVFD +  ++ +TWN+MVA Y 
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
            N    +A + F  M L G +    TF+++I  CA        R +H  +  +GI  D  
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVA 264

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           + T +M  Y KCG++++A  IF  + + K+ V+W+A+++ + QNG    A+  + +M + 
Sbjct: 265 LGTAVMHFYGKCGRLDNARAIFDSLGK-KNTVTWSAILAAYAQNGYETEAIELYHEMVQG 323

Query: 377 GVRPNGFTYSIILTAQP--------------------AVSPFQVHAHII----------- 405
           G+  NG T+  +L A                       V  F+ + ++I           
Sbjct: 324 GLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQL 383

Query: 406 ------KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
                    YE   S   ALL A    G +D  A++ ELI E D
Sbjct: 384 SEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELD 427



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 172/338 (50%), Gaps = 7/338 (2%)

Query: 32  QSLFDRSPQRN--FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           +S+FD+  ++N   + +N ++  Y ++ L +EAL+LF  +   G+     TL + +  C 
Sbjct: 79  RSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACA 138

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     GR VH   V      D  V TSLV+++ +  NV+  R VFD +   N+V+W +
Sbjct: 139 SLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNN 198

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++ Y++N    + +++F  M +EG++P++ TF T++   A          VH  +  +G
Sbjct: 199 MVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASG 258

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             +  ++  A++  Y K   + +ARA+FD +  ++++TW++++A Y  N    EA E ++
Sbjct: 259 IPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYH 318

Query: 270 NMGLAGAELTRSTFVSVIKLCA-TTKELRLARQLHSQVLKNGI--DFDHNIRTGLMVAYS 326
            M   G E+   TF+ ++  C+   + +       S +   G+   F+H +   L+    
Sbjct: 319 EMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLN--LIDLLG 376

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           + G+++ +  + + M    D  +W A++     +G +D
Sbjct: 377 RSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVD 414


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/558 (38%), Positives = 337/558 (60%), Gaps = 24/558 (4%)

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
           AR L  ++ K  +    NI  G    Y K G +E A K+F  M   ++V +W AM++G  
Sbjct: 96  ARGLFERIPKRNV-MSWNILIG---GYVKNGDLETARKLFDEM-PARNVATWNAMVAGLT 150

Query: 359 QNGAIDLAVNFFCQMTREGVRPN----GFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
            +G  + ++ FF  M REG++P+    G  +      +  VS  QVHA+++++  ++   
Sbjct: 151 NSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMC 210

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           VG++L + Y++ G L +       +   +IV+ +  ++G  Q GD EGA++ +  +   G
Sbjct: 211 VGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAG 270

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           V+ N  TF S + +C+   AA+ QG+Q HA +IK  ++  + V ++LV MYS+ G +  +
Sbjct: 271 VEANAVTFVSAVTSCS-DLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDS 329

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
             V       DLV  ++MI  Y  HGH +KA+ +FK+M     E + +TF+ ++ AC+H+
Sbjct: 330 ERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHS 389

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
           GL DEG   F++M   + + P+++HY+C+VDL  R+G L +A D+I  MP      +W+T
Sbjct: 390 GLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKT 449

Query: 655 VLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKV 700
           +L+AC              R+I L PHDSA YVLLSN+ A +  W++ ++VR+ M ++ V
Sbjct: 450 LLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNV 509

Query: 701 KKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           +KE G SW+E+K + + F  GD SH +  +I   LEE+ TR++  GY PD S V  D++D
Sbjct: 510 RKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMED 569

Query: 761 EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 820
           E KE  L+ HSE+LAIAF  ++ P G P++++KNLRVC DCH  IKL+SK+  R+IVVRD
Sbjct: 570 EEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRD 629

Query: 821 TNRFHHFKEGLCSCGDYW 838
            +RFHHFK+G CSCGDYW
Sbjct: 630 VSRFHHFKDGKCSCGDYW 647



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 171/351 (48%), Gaps = 13/351 (3%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V     L+  Y++  ++E  R++FD+M   NV +W ++++G   + +N+  L  F  M
Sbjct: 106 RNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAM 165

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           + EG++P+ +   ++    A    V +  QVH  V+++G +    V ++L  MY++   +
Sbjct: 166 RREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFL 225

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           RD  A    +   + ++ N+ ++G   N     A E F  M  AG E    TFVS +  C
Sbjct: 226 RDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSC 285

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           +    L   +Q+H+  +K G+D    + T L+  YS+CG + D+ ++  +     D+V  
Sbjct: 286 SDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERV-CLEYSGTDLVLC 344

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAH 403
           +AMIS +  +G    AV  F QM   G  PN  T+  +L A          ++ F++   
Sbjct: 345 SAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL--- 401

Query: 404 IIKT-NYEKSFSVGTALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLA 452
           + KT   + S    T +++   + G L+EA   +  +  + D V W  +L+
Sbjct: 402 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 452



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 159/347 (45%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P RN   +N ++       L++E+L  F  +RR G+      L S+ + C  L
Sbjct: 128 RKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGL 187

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V GRQVH   V+SG  RD+ V +SL  +YMR   + DG      +   N+VS  + +
Sbjct: 188 RDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTI 247

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG  +N   +  LE F  M+  G++ N+ TF + +   +D   +A   Q+H + IK G +
Sbjct: 248 SGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVD 307

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V  V  +L+ MY +   + D+  V       D +  ++M++ Y  +    +A   F  M
Sbjct: 308 KVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQM 367

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID-FDHNIRT-GLM--VAYSK 327
             AGAE    TF++++  C+           HS +   G++ F+   +T GL   V +  
Sbjct: 368 MAAGAEPNEVTFLTLLYACS-----------HSGLKDEGMNCFELMTKTYGLQPSVKHYT 416

Query: 328 C--------GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           C        G + +A  +   M    D V W  ++S        D+A
Sbjct: 417 CIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 463



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 154/379 (40%), Gaps = 43/379 (11%)

Query: 375 REGVRPNGFTYSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           REG+      +S I  A  A+    Q+HA    +           LL AY   G    A 
Sbjct: 38  REGLWSEPGLFSHIFRACQALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTAR 97

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS--------------------- 472
            +FE I ++++++W+ ++ GY + GD E A K++ ++ +                     
Sbjct: 98  GLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEE 157

Query: 473 ----------EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
                     EG++P+E+   S+   C      V  G+Q HA  +++ L+  +CV S+L 
Sbjct: 158 SLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVV-SGRQVHAYVVRSGLDRDMCVGSSLA 216

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY + G +       +     ++VS N+ I G  Q+G  + ALE F  MR   +E + +
Sbjct: 217 HMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAV 276

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNE--HHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
           TF+  +T+C+    + +GQQ   + +      + P M   + +V +YSR G L  +    
Sbjct: 277 TFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVM---TSLVHMYSRCGCLGDS---- 329

Query: 641 NRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN-DRK 699
            R+    S T      A         H      L   M AA     E   +  L      
Sbjct: 330 ERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHS 389

Query: 700 VKKEAGYSWIEVKNKTYSF 718
             K+ G +  E+  KTY  
Sbjct: 390 GLKDEGMNCFELMTKTYGL 408


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/593 (38%), Positives = 351/593 (59%), Gaps = 23/593 (3%)

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           M+A E  +   L+   +T S    +IK C     ++ AR +H  V  NG +    +   L
Sbjct: 1   MKAMEAMHRNRLSADAITYS---ELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTL 57

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y K G +++A  +F  M + ++VVSWT MIS +  +     A++F   M REGVRPN
Sbjct: 58  INMYVKFGLLDEARNLFDEMPD-RNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPN 116

Query: 382 GFTYSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            +TYS +L A   +    Q+H  I+K   E    V +AL++ Y K G   +A  VF  + 
Sbjct: 117 MYTYSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMI 176

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D+V W++++ G+AQ  D +  + +Y+++       ++ T +SV+ ACT   A +E G+
Sbjct: 177 TGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGL-ALLELGR 235

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQH 559
           Q H   +K   +  L +++AL+ MY K G++E A+ +F R   ++D++SW++MI G AQ+
Sbjct: 236 QVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQN 293

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           G +  AL++F+ M+ +  + + IT +GV+ AC+HAGLV++G  YF  M     I P  EH
Sbjct: 294 GFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREH 353

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
           Y C++DL  RAG L++A+ +I+ M     A  WR +L ACR              ++ L 
Sbjct: 354 YGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLD 413

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D+  Y+LLSN+YA +  W++ A VR+ M  R VKK+ G SWIEV  + ++F+ GD SH
Sbjct: 414 PADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSH 473

Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
           P+  +I  +L +L  RL   GY PDT++VLQD++ E  E  L  HSE+LAI FGL++ P 
Sbjct: 474 PRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPN 533

Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
              + I KNLR+CGDCH   KL+S+LE R IV+RD  R+HHF+ G+CSCGDYW
Sbjct: 534 QKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 213/421 (50%), Gaps = 15/421 (3%)

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
           + +E  HR +   +  ++ T+S ++      G V  A  VH  V  NG E  T + N LI
Sbjct: 2   KAMEAMHRNR---LSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLI 58

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           +MY+K  ++ +AR +FD M DR+ ++W +M++ Y  + L+ +A +    M   G      
Sbjct: 59  NMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMY 118

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T+ SV++ C     L   RQLH  +LK G++ D  +R+ L+  YSK G+  DA  +F+ M
Sbjct: 119 TYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM 175

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
               D+V W ++I G  QN   D  ++ + +M R     +  T + +L A   ++     
Sbjct: 176 IT-GDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELG 234

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQ 456
            QVH H++K  Y++   +  ALL+ Y K G L++A  +F  ++ EKD+++WS M+AG AQ
Sbjct: 235 RQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ 292

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G +  A+K++  + S+G KPN  T   V+ AC+      +    F +      ++    
Sbjct: 293 NGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGRE 352

Query: 517 VSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
               ++ +  + G ++ A + + +   + D V+W  ++     H +   A+   KE+ + 
Sbjct: 353 HYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKL 412

Query: 576 D 576
           D
Sbjct: 413 D 413



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 194/387 (50%), Gaps = 25/387 (6%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T S ++K C         R VH     +G+     +  +L+++Y++   +++ R +FD+M
Sbjct: 18  TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEM 77

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + NVVSWT+++S Y+ + +N + L+    M  EG++PN +T+S+VL   A +G++    
Sbjct: 78  PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLR--ACDGLL-NLR 134

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  ++K G E    V +ALI  Y K     DA  VF+ M   D + WNS++ G+  N 
Sbjct: 135 QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNS 194

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              E    +  M  A     +ST  SV++ C     L L RQ+H  VLK   D D  +  
Sbjct: 195 DGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNN 252

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KCG +EDA+ +F+ M   KDV+SW+ MI+G  QNG    A+  F  M  +G +
Sbjct: 253 ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPK 312

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNY------EKSFSVGTA------LLNAYVKKG 427
           PN   Y  IL    A S    HA ++   +      ++ F +         +++   + G
Sbjct: 313 PN---YITILGVLFACS----HAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAG 365

Query: 428 ILDEAAK-VFELIDEKDIVAWSAMLAG 453
            LDEA K + E+  E D V W  +L  
Sbjct: 366 KLDEAVKLIHEMNHEPDAVTWRILLGA 392



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 165/339 (48%), Gaps = 9/339 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           ++LFD  P RN V +  ++  Y   +L+ +AL+  + + R G+     T SSVL+ C  L
Sbjct: 71  RNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGL 130

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +    RQ+H   +K G   DV V ++L+D Y +     D   VF++M   ++V W S++
Sbjct: 131 LNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSII 187

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G+A+N   D  L L+ RM+      +  T ++VL       ++    QVH  V+K   +
Sbjct: 188 GGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQD 247

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDG-MEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           ++ +  NAL+ MY K   + DA  +F   M ++D I+W++M+AG   N    +A + F  
Sbjct: 248 LILN--NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEA 305

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN--GIDFDHNIRTGLMVAYSKC 328
           M   G +    T + V+  C+    +      + Q +K   GID        ++    + 
Sbjct: 306 MKSKGPKPNYITILGVLFACSHAGLVNDG-WYYFQSMKEHFGIDPGREHYGCIIDLLGRA 364

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           GK+++A K+   M    D V+W  ++     +  +DLA+
Sbjct: 365 GKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAI 403


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/567 (40%), Positives = 346/567 (61%), Gaps = 27/567 (4%)

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           ++ LR   QLH+ +LK G+     +   L+  YSK      + ++F    + K   +W++
Sbjct: 38  SRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPK-KSSTTWSS 96

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------VHAHII 405
           +IS   QN A  LA+ FF +M  +GVRP+   Y    +A  A    +       VH   +
Sbjct: 97  VISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYP---SATKACGFLRRSDVGKSVHCLAV 153

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           KT Y     VG++L++ Y K G + +A  +F+ + E+++V+WS M+ GYAQ+ D   A+ 
Sbjct: 154 KTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALT 213

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           +++Q   E V  N+FTFSSVI  C++ S  +E GK  H   +K   +++  V SAL+++Y
Sbjct: 214 LFKQALIEDVDVNDFTFSSVIRVCSS-STFLELGKLIHGLCLKMSFDSSSFVGSALISLY 272

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           SK G IE A +VF     R+L  WNSM+   AQH HT++   +F+EM    ++ + I+F+
Sbjct: 273 SKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFL 332

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
            V+ AC+HAGLV++G++YF +M  ++ I P  EHY+ +VDL  RAG L++A+ +I +MP 
Sbjct: 333 SVLYACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPM 391

Query: 646 AASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARV 691
             + +VW  +L  CR+              + +    S ++VLLSN YAA G ++E AR+
Sbjct: 392 RPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARM 451

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           RK++ DR VKKE G SW+E  NK ++F AGD SH +  +IY KLEEL   ++ AGY  DT
Sbjct: 452 RKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADT 511

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           S+VL+ +D E K   +  HSERLAIAFGL+  P G P++++KNLRVCGDCH  IK +SK 
Sbjct: 512 SFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKC 571

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             R ++VRD NRFH F++G CSCGDYW
Sbjct: 572 CGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 197/390 (50%), Gaps = 7/390 (1%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
            +Q+H  ++K G + +  V + LI++Y K+++   +  VFD    + S TW+S+++ +  
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           NE  + A + F  M   G       + S  K C   +   + + +H   +K G   D  +
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            + L+  Y+KCG++ DA  +F  M E ++VVSW+ MI G+ Q      A+  F Q   E 
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPE-RNVVSWSGMIYGYAQLDDGVEALTLFKQALIED 222

Query: 378 VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           V  N FT+S ++    + +  +    +H   +K +++ S  VG+AL++ Y K G+++ A 
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF+ I  +++  W++ML   AQ   T+    ++ ++ + G+KPN  +F SV+ AC+  +
Sbjct: 283 QVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSH-A 341

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSM 552
             VE+G+++ +      +       ++LV +  + G ++ A  V K+   R   S W ++
Sbjct: 342 GLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGAL 401

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           + G   H  T+ A  V   +   D    G+
Sbjct: 402 LTGCRIHKDTEMAAFVADRILEMDSSSSGL 431



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 161/332 (48%), Gaps = 3/332 (0%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           P +S +   +FD +P+++   ++ ++  + ++     AL  F  +   G+        S 
Sbjct: 76  PLFSLQ---VFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSA 132

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
            K CG L     G+ VHC  VK+G+  DV V +SLVD+Y +   + D R +FD+M E NV
Sbjct: 133 TKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 192

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSW+ ++ GYA+       L LF +  +E +  N FTFS+V+ V +    +     +H +
Sbjct: 193 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGL 252

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            +K   +  + V +ALIS+Y K  ++  A  VFD +  R+   WNSM+     +      
Sbjct: 253 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 312

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
           F  F  MG  G +    +F+SV+  C+    +   R+  S +   GI+ +      L+  
Sbjct: 313 FGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 372

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
             + GK+++A  +   M        W A+++G
Sbjct: 373 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 179/379 (47%), Gaps = 20/379 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H   +K G      VS +L++LY +T       +VFD+  + +  +W+S++S +A+
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N+     L+ F RM  +G++P+   + +                VH + +K G      V
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY K   + DAR +FD M +R+ ++W+ M+ GY   +  +EA   F    +   
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           ++   TF SVI++C+++  L L + +H   LK   D    + + L+  YSKCG +E A +
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  +   +++  W +M+    Q+         F +M   G++PN  ++  +L A     
Sbjct: 284 VFDEI-PTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACS--- 339

Query: 397 PFQVHAHIIKTNYE-----KSFSVG------TALLNAYVKKGILDEAAKVFELIDEKDIV 445
               HA +++   E     + + +        +L++   + G L EA  V + +  +   
Sbjct: 340 ----HAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTE 395

Query: 446 A-WSAMLAGYAQIGDTEGA 463
           + W A+L G     DTE A
Sbjct: 396 SVWGALLTGCRIHKDTEMA 414


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/753 (32%), Positives = 398/753 (52%), Gaps = 38/753 (5%)

Query: 109 FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
           F+ D  +   +V+ Y +   V+D R VF  +   NV SWT LL+ YA+N  +  VLEL  
Sbjct: 112 FSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV-CNALISMYLKS 227
           +M + G+ PN+ T +TV+G +++ G    A ++H             V   ALI MY K 
Sbjct: 172 QMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKC 231

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
             +  A  VFD   ++D    N+M++ Y+     ++A  TFN +  +G +  + T+  + 
Sbjct: 232 GDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLF 291

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           + CAT      AR  H   + + +  D  + T L+  YS+CG +EDA ++F  M   K+V
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRM-PGKNV 350

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT----AQPAVSPFQVHAH 403
           V+W  MI+G+ Q G  D A+  +  M   GV P+  T+  +L     A+   +   +H H
Sbjct: 351 VTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKH 410

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE--LIDEKDIVAWSAMLAGYAQIGDTE 461
           ++   Y+ S +V +AL+  Y   G L +A  VF   +     +++W+AML    + G+  
Sbjct: 411 VVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGR 470

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+ ++R++  EGVK N  TF S I+AC++  A VE    F    +   L + + + ++L
Sbjct: 471 SALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVV-LGTSL 529

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + +Y K G ++ A EVF     +++V+WN+++   +Q+G    + E+ +EM     + + 
Sbjct: 530 INLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNE 589

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +T + ++  C+H GLV +   YF  MV  H + PT EHY C+VDL  R+G LE+    I+
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFIS 649

Query: 642 RMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQE 687
             PF+  + +W ++L +C              R++ L P +++ YVLLSNM+AA G    
Sbjct: 650 SKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDA 709

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
              + KL  +R +KKE   S+IEV    + F      H    +I ++L E S  +++AG+
Sbjct: 710 VKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGF 769

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            P     L D+           H E+LAIAFG +++P G PL +VKNLR+C  CH  IK 
Sbjct: 770 VP-----LHDVR--------GYHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKH 816

Query: 808 ISKLERRDIVVRDTNRFHHFK--EGLCSCGDYW 838
           I K+  RDI VR+ NR HHF+  +  CSCGDYW
Sbjct: 817 ICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 256/555 (46%), Gaps = 7/555 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +F      N   +  LL  Y ++  H+  L L   +  LG+     TL++V+   
Sbjct: 133 KDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAV 192

Query: 89  GCLFDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             L D    R++H     +     DV + T+L+D+Y +  ++     VFD     ++   
Sbjct: 193 SELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACC 252

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            +++S Y +       +  F+R+Q  G++PN  T++ +    A  G+ + A   H   I 
Sbjct: 253 NAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFIL 312

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +       V  AL+SMY +   + DAR VFD M  ++ +TWN M+AGY       EA + 
Sbjct: 313 SKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQL 372

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           + +M  AG E    TFV+V++ C+  + L   R +H  V+  G D    + + L+  YS 
Sbjct: 373 YVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSA 432

Query: 328 CGKMEDASKIFSM-MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           CG + DA  +F   +     V+SWTAM++   +NG    A+  F +M  EGV+ N  T+ 
Sbjct: 433 CGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFV 492

Query: 387 IILTAQPAVSPF-QVHA---HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             + A  ++    + HA    +I T Y     +GT+L+N Y K G LD A +VF  +  K
Sbjct: 493 STIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFK 552

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           +IV W+ +LA  +Q G+   + ++ +++  +G +PNE T  +++  C+      +    F
Sbjct: 553 NIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYF 612

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGH 561
            +      L         LV +  + G +E     +  +    D V W S++     H  
Sbjct: 613 RSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSD 672

Query: 562 TKKALEVFKEMRRQD 576
            ++ L   + +   D
Sbjct: 673 VERGLRAARRVLGLD 687


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/536 (39%), Positives = 329/536 (61%), Gaps = 20/536 (3%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y K G +E A K+F  M   ++V +W AM++G   +G  + ++ FF  M REG++P
Sbjct: 6   LIGGYVKNGDLETARKLFDEM-PARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQP 64

Query: 381 N----GFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           +    G  +      +  VS  QVHA+++++  ++   VG++L + Y++ G L +     
Sbjct: 65  DEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAAL 124

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             +   +IV+ +  ++G  Q GD EGA++ +  +   GV+ N  TF S + +C+   AA+
Sbjct: 125 RALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCS-DLAAL 183

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
            QG+Q HA +IK  ++  + V ++LV MYS+ G +  +  V       DLV  ++MI  Y
Sbjct: 184 AQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAY 243

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
             HGH +KA+ +FK+M     E + +TF+ ++ AC+H+GL DEG   F++M   + + P+
Sbjct: 244 GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPS 303

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLI 662
           ++HY+C+VDL  R+G L +A D+I  MP      +W+T+L+AC              R+I
Sbjct: 304 VKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVI 363

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            L PHDSA YVLLSN+ A +  W++ ++VR+ M ++ V+KE G SW+E+K + + F  GD
Sbjct: 364 ELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGD 423

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
            SH +  +I   LEE+ TR++  GY PD S V  D++DE KE  L+ HSE+LAIAF  ++
Sbjct: 424 ESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLS 483

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            P G P++++KNLRVC DCH  IKL+SK+  R+IVVRD +RFHHFK+G CSCGDYW
Sbjct: 484 LPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 181/368 (49%), Gaps = 10/368 (2%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LI  Y+K+  +  AR +FD M  R+  TWN+MVAG   + L+ E+   F  M   G +
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                  S+ + CA  +++   RQ+H+ V+++G+D D  + + L   Y +CG + D    
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
              +  + ++VS    ISG  QNG  + A+ FFC M   GV  N  T+   +T+   ++ 
Sbjct: 124 LRALPSL-NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 182

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                Q+HA  IKT  +K   V T+L++ Y + G L ++ +V       D+V  SAM++ 
Sbjct: 183 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 242

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y   G  + AV +++Q+ + G +PNE TF +++ AC+      E    F   +    L  
Sbjct: 243 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQP 302

Query: 514 ALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           ++   + +V +  + G +  A + +     + D V W +++        T+K  ++ + +
Sbjct: 303 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSAC----KTQKKFDMAERI 358

Query: 573 RRQDLEFD 580
             + +E D
Sbjct: 359 AERVIELD 366



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 168/343 (48%), Gaps = 13/343 (3%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+  Y++  ++E  R++FD+M   NV +W ++++G   + +N+  L  F  M+ EG++P+
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
            +   ++    A    V +  QVH  V+++G +    V ++L  MY++   +RD  A   
Sbjct: 66  EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            +   + ++ N+ ++G   N     A E F  M  AG E    TFVS +  C+    L  
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +Q+H+  +K G+D    + T L+  YS+CG + D+ ++  +     D+V  +AMIS + 
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERV-CLEYSGTDLVLCSAMISAYG 244

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAHIIKT-NYE 410
            +G    AV  F QM   G  PN  T+  +L A          ++ F++   + KT   +
Sbjct: 245 FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL---MTKTYGLQ 301

Query: 411 KSFSVGTALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLA 452
            S    T +++   + G L+EA   +  +  + D V W  +L+
Sbjct: 302 PSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 344



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 159/347 (45%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P RN   +N ++       L++E+L  F  +RR G+      L S+ + C  L
Sbjct: 20  RKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGL 79

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V GRQVH   V+SG  RD+ V +SL  +YMR   + DG      +   N+VS  + +
Sbjct: 80  RDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTI 139

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SG  +N   +  LE F  M+  G++ N+ TF + +   +D   +A   Q+H + IK G +
Sbjct: 140 SGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVD 199

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V  V  +L+ MY +   + D+  V       D +  ++M++ Y  +    +A   F  M
Sbjct: 200 KVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQM 259

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID-FDHNIRT-GLM--VAYSK 327
             AGAE    TF++++  C+           HS +   G++ F+   +T GL   V +  
Sbjct: 260 MAAGAEPNEVTFLTLLYACS-----------HSGLKDEGMNCFELMTKTYGLQPSVKHYT 308

Query: 328 C--------GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           C        G + +A  +   M    D V W  ++S        D+A
Sbjct: 309 CIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 355



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 42/308 (13%)

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTS-------------------------------E 473
           ++W+ ++ GY + GD E A K++ ++ +                               E
Sbjct: 1   MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G++P+E+   S+   C      V  G+Q HA  +++ L+  +CV S+L  MY + G +  
Sbjct: 61  GMQPDEYGLGSLFRCCAGLRDVV-SGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRD 119

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
                +     ++VS N+ I G  Q+G  + ALE F  MR   +E + +TF+  +T+C+ 
Sbjct: 120 GEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSD 179

Query: 594 AGLVDEGQQYFDIMVNE--HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
              + +GQQ   + +      + P M   + +V +YSR G L  +     R+    S T 
Sbjct: 180 LAALAQGQQIHALAIKTGVDKVVPVM---TSLVHMYSRCGCLGDS----ERVCLEYSGTD 232

Query: 652 WRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN-DRKVKKEAGYSWIE 710
                A         H      L   M AA     E   +  L        K+ G +  E
Sbjct: 233 LVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFE 292

Query: 711 VKNKTYSF 718
           +  KTY  
Sbjct: 293 LMTKTYGL 300


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 242/729 (33%), Positives = 392/729 (53%), Gaps = 68/729 (9%)

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           R   + + R+ FD +    + SW S++SGY  N +     +LF  M              
Sbjct: 29  RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM-------------- 74

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
                ++  +V+                     N L+S Y+K++M+ +AR VF+ M +R+
Sbjct: 75  -----SERNVVS--------------------WNGLVSGYIKNRMIVEARNVFELMPERN 109

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++W +MV GY+   +  EA   F  M     E    ++  +         +  AR+L+ 
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYD 165

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            +    +    N+  GL     + G++++A  IF  MRE ++VV+WT MI+G+ QN  +D
Sbjct: 166 MMPVKDVVASTNMIGGL----CREGRVDEARLIFDEMRE-RNVVTWTTMITGYRQNNRVD 220

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
           +A   F  M  +       +++ +L         +      +    K      A++  + 
Sbjct: 221 VARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG 276

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           + G + +A +VF+L++++D   W  M+  Y + G    A+ ++ Q+  +GV+P+  +  S
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           +++ C A  A+++ G+Q HA  ++ + ++ + V+S L+TMY K G +  A  VF R   +
Sbjct: 337 ILSVC-ATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK 395

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D++ WNS+I GYA HG  ++AL++F EM       + +T I ++TAC++AG ++EG + F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR---- 660
           + M ++  + PT+EHYSC VD+  RAG ++KAM++I  M     ATVW  +L AC+    
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515

Query: 661 ----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                     L   +P ++  YVLLS++ A+   W + A VRK M    V K  G SWIE
Sbjct: 516 LDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575

Query: 711 VKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
           V  K + F  G I +HP+   I   LE+    L++AGY PD S+VL D+D+E K   LS+
Sbjct: 576 VGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSERLA+A+GL+  P G P++++KNLRVCGDCH  IKLISK+  R+I++RD NRFHHF  
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695

Query: 830 GLCSCGDYW 838
           G CSC DYW
Sbjct: 696 GECSCRDYW 704



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 225/461 (48%), Gaps = 36/461 (7%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V     LV  Y++   + + R VF+ M E NVVSWT+++ GY +  M      LF RM
Sbjct: 77  RNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM 136

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
                + N  +++ + G L D+G +  A +++ M+     +VV S    +I    +   V
Sbjct: 137 P----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK--DVVAS--TNMIGGLCREGRV 188

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            +AR +FD M +R+ +TW +M+ GY  N     A + F  M     E T  ++ S++   
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSMLLGY 244

Query: 291 ATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
             +  +  A +    + +K  I  +      ++V + + G++  A ++F +M E +D  +
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACN-----AMIVGFGEVGEISKARRVFDLM-EDRDNAT 298

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           W  MI  + + G    A++ F QM ++GVRP+  +   IL+    ++      QVHAH++
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           +  ++    V + L+  YVK G L +A  VF+    KDI+ W+++++GYA  G  E A+K
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS------S 519
           I+ ++ S G  PN+ T  +++ AC+        GK      I   + +  CV+      S
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYA------GKLEEGLEIFESMESKFCVTPTVEHYS 472

Query: 520 ALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
             V M  + G ++ A E+ +    K D   W +++     H
Sbjct: 473 CTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTH 513



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 153/351 (43%), Gaps = 43/351 (12%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-----LGLPLFGSTLSSVLKTC 88
           +FD   +RN V +  ++  Y +++    A  LF  +           L G TLS  ++  
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253

Query: 89  GCLFDHVFGRQV-HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              F+ +  + V  C  +  GF                   +   RRVFD M + +  +W
Sbjct: 254 EEFFEVMPMKPVIACNAMIVGFGE--------------VGEISKARRVFDLMEDRDNATW 299

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
             ++  Y R       L+LF +MQ +G++P+  +  ++L V A    +    QVH  +++
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              +    V + L++MY+K   +  A+ VFD    +D I WNS+++GY ++ L  EA + 
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA--- 324
           F+ M  +G    + T ++++  C+           ++  L+ G++   ++ +   V    
Sbjct: 420 FHEMPSSGTMPNKVTLIAILTACS-----------YAGKLEEGLEIFESMESKFCVTPTV 468

Query: 325 --YS-------KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
             YS       + G+++ A ++   M    D   W A++     +  +DLA
Sbjct: 469 EHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 2/173 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKTC 88
           K + +FD    R+   +  ++  Y R     EAL+LF  +++ G+ P F S L S+L  C
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPS-LISILSVC 341

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L    +GRQVH   V+  F  DV V++ L+ +Y++   +   + VFD  +  +++ W 
Sbjct: 342 ATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWN 401

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
           S++SGYA + + +  L++FH M   G  PN  T   +L   +  G +   +++
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/746 (33%), Positives = 416/746 (55%), Gaps = 23/746 (3%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKTCGCL 91
           +LFD+ P RN V ++ ++  Y +   +++AL  FL  +R  +  L    L+S+++ C   
Sbjct: 96  TLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQR 155

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G QVH   +KSGF  DV V TSLV LY +   ++  R VFD +     V+WT+++
Sbjct: 156 DGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAII 215

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY ++  ++  L+LF+ M    + P+ +  S++L   +  G +    Q+H  V+++  +
Sbjct: 216 TGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETK 275

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +  S  N LI  Y K   V+  +A+FD ++ ++ I+W +M+AGY+ N    EA E    M
Sbjct: 276 MDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEM 335

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +       SV+  C +   L+  RQ+HS V+K  ++ D+ +   L+  YSKC  +
Sbjct: 336 FRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNAL 395

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA ++F ++     VV + AMI G+ + G +  A+  F +M  + V P+  T+  +L  
Sbjct: 396 DDAKRVFDVV-TCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGL 454

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             A+       Q+H  IIK  +       +AL++ Y K   + +A  VFE    KDIV W
Sbjct: 455 SAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVW 514

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +++ +GY     +E A K+Y  L     +PNEFTF+++  A +   A++  G+QFH   +
Sbjct: 515 NSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASIL-ASLPHGQQFHNQVM 573

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K  L +   +++ALV MY+K G++E A ++F     +D   WNSMI  YAQHG  ++AL 
Sbjct: 574 KMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALR 633

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F+ M   ++  + +TF+ V++AC+H G V++G Q+++ M   + I P +EHY+ +V L 
Sbjct: 634 MFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMA-RYGIEPGIEHYASVVTLL 692

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYV 673
            RAG L +A + I +M    +A VWR++L+ACR+              IS+ P DS  YV
Sbjct: 693 GRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYV 752

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           +LSN++A+ G W +  R+R  M+   V KE G SWIEV  + + F++ D  H +++ IY 
Sbjct: 753 MLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYL 812

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDID 759
            L+EL+T++KD G   DT+ +L+ ID
Sbjct: 813 ALDELTTQMKDVGCVHDTT-ILEMID 837



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/609 (27%), Positives = 311/609 (51%), Gaps = 35/609 (5%)

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
           ++ R+VHC+ V  G   DV +S  L+  Y +  +V D   +FD M   N+VSW+S++S Y
Sbjct: 57  LYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMY 116

Query: 155 ARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            +   N++ L  F   Q   + K N +  ++++             QVH+ VIK+G    
Sbjct: 117 TQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGED 176

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  +L+ +Y K   +  AR VFDG+  +  +TW +++ GY  +     + + FN M  
Sbjct: 177 VYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMME 236

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +     +    S++  C+    L+  +Q+H+ VL++    D +    L+  Y+KCG+++ 
Sbjct: 237 SNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKA 296

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
              +F  + ++K+++SWT MI+G++QN     AV    +M R G +P+ +  S +LT+  
Sbjct: 297 GKALFDRL-DVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCG 355

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           +V       Q+H+++IK   E    V  AL++ Y K   LD+A +VF+++    +V ++A
Sbjct: 356 SVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNA 415

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+ GY++ G   GA+++++++  + V P+  TF S++   +A    ++  KQ H   IK 
Sbjct: 416 MIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGL-SAALLCLQLSKQIHGLIIKY 474

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             +     SSAL+ +YSK   I  A  VF+    +D+V WNS+  GY     +++A +++
Sbjct: 475 GFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLY 534

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDL 626
            +++      +  TF  + TA +    +  GQQ+ + ++    E   + T    + +VD+
Sbjct: 535 SDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFIT----NALVDM 590

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQ 686
           Y++ G +E+A  I        S++VW+              D+A +  + +MYA  G  +
Sbjct: 591 YAKCGSVEEAEKIF-------SSSVWK--------------DTACWNSMISMYAQHGKVE 629

Query: 687 ERARVRKLM 695
           E  R+ + M
Sbjct: 630 EALRMFETM 638



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 225/440 (51%), Gaps = 6/440 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  ++LFDR   +N + +  ++  Y ++S   EA+ L   + R+G        SSVL +C
Sbjct: 295 KAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSC 354

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G +     GRQ+H   +K     D  V+ +L+D+Y + N ++D +RVFD +   +VV + 
Sbjct: 355 GSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYN 414

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           +++ GY+R       LE+F  M+++ + P+  TF ++LG+ A    +  + Q+H ++IK 
Sbjct: 415 AMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKY 474

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G  +     +ALI +Y K   +RDAR VF+G  ++D + WNS+ +GY       EAF+ +
Sbjct: 475 GFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLY 534

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           +++ L+       TF ++    +    L   +Q H+QV+K G++ D  I   L+  Y+KC
Sbjct: 535 SDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKC 594

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +E+A KIFS     KD   W +MIS + Q+G ++ A+  F  M    + PN  T+  +
Sbjct: 595 GSVEEAEKIFS-SSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSV 653

Query: 389 LTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKD 443
           L+A   V       Q +  + +   E       +++    + G L EA +  E +     
Sbjct: 654 LSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPA 713

Query: 444 IVAWSAMLAGYAQIGDTEGA 463
            + W ++L+     G+ E A
Sbjct: 714 ALVWRSLLSACRVFGNVELA 733


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  431 bits (1107), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/651 (34%), Positives = 368/651 (56%), Gaps = 21/651 (3%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D+  + + + + ++TN+++D R +FD + + + VSWT+++SGY  +  +   L LF +M+
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 172 VEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           ++  ++ + F  S  L              +H   +K G      V +AL+ MY+K   +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEI 167

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             +  VFD M  R+++TW +++ G V           F+ MG +  E     +   +K  
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A +  L   R +H+Q LK G D +  +   L   Y+KCGK++     F  MR + DVVSW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL-DVVSW 286

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
           T +++ ++Q G  D  +  F +M    V PN +T+S +++     +      Q+HAH++ 
Sbjct: 287 TTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
             +  + SV  +++  Y K G L   +KVF  +  +DI+ WS ++A Y+Q+G  E A + 
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEY 406

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
             ++ SEG KPNEF  +SV++ C    A +EQGKQ HA  +   L     V SAL+ MY+
Sbjct: 407 LSRMRSEGPKPNEFALASVLSVC-GSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYA 465

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G+I  AS++F    K D++SW +MI GYA+HGH+++A+E+F+ +++  L  D +TFIG
Sbjct: 466 KCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIG 525

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V+TAC+HAG+VD G  YF+ M  ++HI P+ EHY CM+DL  RAG L  A  +I  MP  
Sbjct: 526 VLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQ 585

Query: 647 ASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
               VW T+L ACR+              + L P+ +  ++ L+N++AA G W+E A +R
Sbjct: 586 WDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIR 645

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            LM  + V KE G+S ++VK+  ++F++GD SHPQ   IY+ LEEL++ ++
Sbjct: 646 MLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 277/552 (50%), Gaps = 11/552 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVLKT 87
           K  + LFD+ PQR+ V +  ++  Y   S   EAL LF  +R +  L +    LS  LKT
Sbjct: 66  KDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKT 125

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           CG   ++++G  +H   VK+G    V V ++L+D+YM+   +    +VFD+M   N V+W
Sbjct: 126 CGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTW 185

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T++++G  R   ++  L  F  M    ++ +S+ ++  L   AD G +     +HT  +K
Sbjct: 186 TAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLK 245

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G +  + V N+L +MY K   +      F  M   D ++W ++V  Y+         + 
Sbjct: 246 KGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQA 305

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  M  +       TF +VI  CA    L+   QLH+ VL  G     ++   +M  YSK
Sbjct: 306 FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSK 365

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG++   SK+F  M+  +D+++W+ +I+ + Q G  + A  +  +M  EG +PN F  + 
Sbjct: 366 CGELASVSKVFCSMK-FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALAS 424

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+   +++      Q+HAH++    E++  V +AL+  Y K G + EA+K+F    + D
Sbjct: 425 VLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDD 484

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           I++W+AM++GYA+ G ++ A++++  +   G++P+  TF  V+ AC+           F+
Sbjct: 485 IISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFN 544

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
           + S    +  +      ++ +  + G +  A  + +    + D V W++++     HG  
Sbjct: 545 SMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDV 604

Query: 563 ----KKALEVFK 570
               + A EV K
Sbjct: 605 DCGQRAAAEVLK 616


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/537 (41%), Positives = 329/537 (61%), Gaps = 21/537 (3%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVR 379
           ++V Y+K G++E A K+F  M + +D  SW A ISG++ +     A+  F  M R E   
Sbjct: 159 MIVGYAKLGRLEQARKLFDEMPQ-RDNFSWNAAISGYVTHNQPREALELFRVMQRHERSS 217

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N FT S  L A  A+       ++H ++I+T       V +ALL+ Y K G LDEA  +
Sbjct: 218 SNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGI 277

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + ++D+V+W+ M+    + G  E    ++R L   GV+PNE+TF+ V+NAC A  AA
Sbjct: 278 FDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNAC-ADHAA 336

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
              GK+ H   + A  +      SALV MYSK GN   A  VF    + DLVSW S+I G
Sbjct: 337 EHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVG 396

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           YAQ+G   +AL  F+ + +   + D +T++GV++ACTHAGLVD+G +YF  +  +H +  
Sbjct: 397 YAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 456

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
           T +HY+C++DL +R+G  ++A +II+ MP      +W ++L  CR              L
Sbjct: 457 TADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKAL 516

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             ++P + A Y+ L+N+YA  G W E A VRK M++  + K+ G SWIE+K + + FL G
Sbjct: 517 YEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVG 576

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP+++ I+  L ELS ++K+ GY PDT++VL D+++E KE  L  HSE+LA+ FG++
Sbjct: 577 DTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVFGII 636

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +TP G P+++ KNLR C DCHT IK ISK+ +R I VRD+NRFH F++G CSC DYW
Sbjct: 637 STPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 222/463 (47%), Gaps = 20/463 (4%)

Query: 147 WTSLLSGYARNKMNDRVLELFHRM----QVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +++L++   R+    R LEL  R+    +     P  F  + +L + A  G +  A    
Sbjct: 90  YSTLIAACVRH----RALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDA---- 141

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
            M+    G       N +I  Y K   +  AR +FD M  RD+ +WN+ ++GYVT+    
Sbjct: 142 QMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPR 201

Query: 263 EAFETFNNMGL-AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           EA E F  M     +   + T  S +   A    LRL +++H  +++  ++ D  + + L
Sbjct: 202 EALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSAL 261

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y KCG +++A  IF  M++ +DVVSWT MI    ++G  +     F  + + GVRPN
Sbjct: 262 LDLYGKCGSLDEARGIFDQMKD-RDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPN 320

Query: 382 GFTYSIILT--AQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            +T++ +L   A  A      +VH +++   Y+      +AL++ Y K G    A +VF 
Sbjct: 321 EYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFN 380

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            + + D+V+W++++ GYAQ G  + A+  +  L   G KP++ T+  V++ACT      +
Sbjct: 381 EMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDK 440

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGY 556
             + FH+   K  L +     + ++ + ++ G  + A  +      K D   W S++ G 
Sbjct: 441 GLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGC 500

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
             HG+ + A    K +   + E +  T+I +     +AGL  E
Sbjct: 501 RIHGNLELAKRAAKALYEIEPE-NPATYITLANIYANAGLWSE 542



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 193/426 (45%), Gaps = 62/426 (14%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            GR+VH     S F   V +S  L+D+Y +  ++ D + +FD+M   ++ SW +++ GYA
Sbjct: 105 LGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYA 164

Query: 156 R-----------NKMNDR--------------------VLELFHRMQV-EGIKPNSFTFS 183
           +           ++M  R                     LELF  MQ  E    N FT S
Sbjct: 165 KLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLS 224

Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
           + L   A    +    ++H  +I+    +   V +AL+ +Y K   + +AR +FD M+DR
Sbjct: 225 SALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDR 284

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D ++W +M+     +    E F  F ++  +G      TF  V+  CA      L +++H
Sbjct: 285 DVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVH 344

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
             ++  G D      + L+  YSKCG    A ++F+ M +  D+VSWT++I G+ QNG  
Sbjct: 345 GYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ-PDLVSWTSLIVGYAQNGQP 403

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAY 423
           D A++FF  + + G +P+  TY  +L+A         HA ++    E   S+        
Sbjct: 404 DEALHFFELLLQSGTKPDQVTYVGVLSA-------CTHAGLVDKGLEYFHSIKE------ 450

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K G++  A     +ID         +LA   +  + E  +       +  VKP++F ++
Sbjct: 451 -KHGLMHTADHYACVID---------LLARSGRFKEAENIID------NMPVKPDKFLWA 494

Query: 484 SVINAC 489
           S++  C
Sbjct: 495 SLLGGC 500



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 164/351 (46%), Gaps = 30/351 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR----LGLPLFGSTLSSVLKT 87
           + LFD  PQR+   +N  +  Y   +  +EAL LF  ++R           S+  +    
Sbjct: 173 RKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAA 232

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             CL     G+++H   +++    D  V ++L+DLY +  ++++ R +FD M + +VVSW
Sbjct: 233 IPCL---RLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSW 289

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T+++     +   +    LF  +   G++PN +TF+ VL   AD        +VH  ++ 
Sbjct: 290 TTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMH 349

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G +  +   +AL+ MY K    R AR VF+ M   D ++W S++ GY  N    EA   
Sbjct: 350 AGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHF 409

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT--GLMVA- 324
           F  +  +G +  + T+V V+  C            H+ ++  G+++ H+I+   GLM   
Sbjct: 410 FELLLQSGTKPDQVTYVGVLSACT-----------HAGLVDKGLEYFHSIKEKHGLMHTA 458

Query: 325 ---------YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                     ++ G+ ++A  I   M    D   W +++ G   +G ++LA
Sbjct: 459 DHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELA 509



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 56/335 (16%)

Query: 359 QNGAIDLAVNFFCQMTR--EGV--------RPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           ++   + AV+  CQ  R  E V        RP+   YS ++ A       +    VHAH 
Sbjct: 54  EDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHT 113

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
             +N+     +   LL+ Y K G L +A  +F+ +  +D+ +W+ M+ GYA++G  E A 
Sbjct: 114 KASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQAR 173

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTA---PSAAVE------------------------ 497
           K++ ++       + F++++ I+       P  A+E                        
Sbjct: 174 KLFDEMPQR----DNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAA 229

Query: 498 --------QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
                    GK+ H   I+ +LN    V SAL+ +Y K G+++ A  +F + + RD+VSW
Sbjct: 230 SAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSW 289

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
            +MI    + G  ++   +F+++ +  +  +  TF GV+ AC        G++    M+ 
Sbjct: 290 TTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMM- 348

Query: 610 EHHIY-PTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            H  Y P     S +V +YS+ G    A  + N M
Sbjct: 349 -HAGYDPGSFAISALVHMYSKCGNTRVARRVFNEM 382



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 5/147 (3%)

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           LC  + ++  Y+K G +E A ++F    +RD  SWN+ I GY  H   ++ALE+F+ M+R
Sbjct: 153 LCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQR 212

Query: 575 QDL-EFDGITFIGVITACTHAGLVDEGQQYFDIMV-NEHHIYPTMEHYSCMVDLYSRAGM 632
            +    +  T    + A      +  G++    ++  E ++   +  +S ++DLY + G 
Sbjct: 213 HERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVV--WSALLDLYGKCGS 270

Query: 633 LEKAMDIINRMPFAASATVWRTVLAAC 659
           L++A  I ++M        W T++  C
Sbjct: 271 LDEARGIFDQMK-DRDVVSWTTMIHRC 296


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/608 (38%), Positives = 343/608 (56%), Gaps = 58/608 (9%)

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           I+L      L+  + +H+ +L+ G+D D  +   ++      G    + +IF   +E  +
Sbjct: 14  IRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKE-PN 72

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVHA 402
           +  +  MI G + N +   ++  +  M +EG+ P+ FT+  +L A   +       ++H 
Sbjct: 73  IFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHG 132

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-------------------------E 437
            ++K   E    V T+L++ Y K G +D A KVF                         E
Sbjct: 133 LVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCRE 192

Query: 438 LID-------------EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
            ID             EKDIV+WS+M+ GYA  G  + A+ ++ ++ +EG +P+ +    
Sbjct: 193 AIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVG 252

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           V+ AC A   A+E G        + +      + +AL+ MY+K G ++SA EVF+  RK+
Sbjct: 253 VLCAC-ARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKK 311

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D+V WN+ I G A  GH K A  +F +M +  +E DG TF+G++ ACTHAGLVDEG+QYF
Sbjct: 312 DIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYF 371

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--- 661
           + M     + P +EHY CMVDL  RAG L++A  ++  MP  A+A VW  +L  CRL   
Sbjct: 372 NSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRD 431

Query: 662 -----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                      I+L+P +S  YVLLSN+Y+A+  W++ A++R +M++R +KK  GYSWIE
Sbjct: 432 TQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIE 491

Query: 711 VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
           V    + FL GD SHP S +IY+KL EL   LK +GY P T YVL DI++E KE  +  H
Sbjct: 492 VDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCH 551

Query: 771 SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           SE+LAIAFGL++T     +++VKNLRVCGDCH  IK IS+   R+I+VRD NRFH F +G
Sbjct: 552 SEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDG 611

Query: 831 LCSCGDYW 838
            CSC DYW
Sbjct: 612 SCSCKDYW 619



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 187/426 (43%), Gaps = 59/426 (13%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + VH   ++ G   D  +   ++       N     R+F    E N+  + +++ G   N
Sbjct: 27  KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                 +E++H M+ EG+ P+SFTF  +L   A        +++H +V+K G E    V 
Sbjct: 87  DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVN 146

Query: 218 NALISMYLKS--------------------------------------KMVRDARAVFDG 239
            +L+S+Y K                                        M R A +VFDG
Sbjct: 147 TSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDG 206

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M ++D ++W+SM+ GY +N L  EA + F  M   G        V V+  CA    L L 
Sbjct: 207 MLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELG 266

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
               + + +N    +  + T L+  Y+KCG+M+ A ++F  MR+ KD+V W A ISG   
Sbjct: 267 NWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRK-KDIVVWNAAISGLAM 325

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIK------TNYEKSF 413
           +G +  A   F QM + G+ P+G T+  +L A         HA ++        + E+ F
Sbjct: 326 SGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCA-------CTHAGLVDEGRQYFNSMERVF 378

Query: 414 SVGT------ALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKI 466
           ++         +++   + G LDEA ++ + +  E + + W A+L G     DT+    +
Sbjct: 379 TLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGV 438

Query: 467 YRQLTS 472
            +QL +
Sbjct: 439 LKQLIA 444



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 196/416 (47%), Gaps = 44/416 (10%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            VH  +++ G +  + + N ++           +  +F   ++ +   +N+M+ G V N+
Sbjct: 28  HVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLND 87

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              E+ E +++M   G      TF  ++K CA   + +L  +LH  V+K G + D  + T
Sbjct: 88  SFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNT 147

Query: 320 GLMVAYSKCGKMEDASKIFSMMREM----------------------------------- 344
            L+  Y KCG +++A K+F  + E                                    
Sbjct: 148 SLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGM 207

Query: 345 --KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVH- 401
             KD+VSW++MI G+  NG    A++ F +M  EG RP+ +    +L A   +   ++  
Sbjct: 208 LEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGN 267

Query: 402 --AHIIKTN-YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
             ++++  N +  +  +GTAL++ Y K G +D A +VF  + +KDIV W+A ++G A  G
Sbjct: 268 WASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSG 327

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCV 517
             + A  ++ Q+   G++P+  TF  ++ ACT  +  V++G+Q F++      L   +  
Sbjct: 328 HVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTH-AGLVDEGRQYFNSMERVFTLTPEIEH 386

Query: 518 SSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
              +V +  + G ++ A ++ K    + + + W +++ G   H  T+    V K++
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQL 442



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 51/368 (13%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F ++ + N   +N ++     +   QE++ ++  +R+ GL     T   +LK C  L D
Sbjct: 64  IFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLD 123

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS- 152
              G ++H   VK+G   D  V+TSLV LY +   +++  +VFDD+ E NV +WT+++S 
Sbjct: 124 SKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISG 183

Query: 153 -------------------------------------GYARNKMNDRVLELFHRMQVEGI 175
                                                GYA N +    L+LF +M  EG 
Sbjct: 184 YIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGF 243

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN---GGEVVTSVCNALISMYLKSKMVRD 232
           +P+ +    VL   A  G +        ++ +N   G  V+ +   ALI MY K   +  
Sbjct: 244 RPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGT---ALIDMYAKCGRMDS 300

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  VF GM  +D + WN+ ++G   +     AF  F  M  +G E   +TFV ++  C  
Sbjct: 301 AWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTH 360

Query: 293 TKELRLARQLHS---QVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVV 348
              +   RQ  +   +V     + +H    G MV    + G +++A ++   M    + +
Sbjct: 361 AGLVDEGRQYFNSMERVFTLTPEIEH---YGCMVDLLGRAGFLDEAHQLVKSMPMEANAI 417

Query: 349 SWTAMISG 356
            W A++ G
Sbjct: 418 VWGALLGG 425



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 6/226 (2%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+FD   +++ V ++ ++  Y  + L +EAL+LF  +   G       +  VL  C  L 
Sbjct: 202 SVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLG 261

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G        ++ F  +  + T+L+D+Y +   ++    VF  M + ++V W + +S
Sbjct: 262 ALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAIS 321

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT---MVIKNG 209
           G A +        LF +M+  GI+P+  TF  +L      G+V    Q       V    
Sbjct: 322 GLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLT 381

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
            E+    C  ++ +  ++  + +A  +   M  + ++I W +++ G
Sbjct: 382 PEIEHYGC--MVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425


>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/566 (40%), Positives = 338/566 (59%), Gaps = 23/566 (4%)

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           T+ LR   QLH QV+K G +    +   L+  YSK      + K+F      K   +W++
Sbjct: 20  TRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPH-KSATTWSS 78

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI----ILTAQPAVSPFQVHAHIIKTN 408
           +IS   QN     A+ FF +M R G+ P+  T       +           +HA  +KT 
Sbjct: 79  VISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTA 138

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
           +     VG++L++ Y K G ++ A KVF+ +  K++V+WS M+ GY+Q+G  E A+ +++
Sbjct: 139 HHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFK 198

Query: 469 QLTSEG--VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           +   +   ++ N+FT SSV+  C+A S   E GKQ H    K   +++  V+S+L+++YS
Sbjct: 199 RALEQDYDIRVNDFTLSSVLRVCSA-STLFELGKQVHGLCFKTSFDSSCFVASSLISLYS 257

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G +E   +VF+  + R+L  WN+M+   AQH HT +  E+F+EM R  ++ + ITF+ 
Sbjct: 258 KCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLC 317

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           ++ AC+HAGLV++G+  F +M  EH I P  +HY+ +VDL  RAG LE+A+ +I  MP  
Sbjct: 318 LLYACSHAGLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQ 376

Query: 647 ASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
            + +VW  +L  CR+                +    S I VLLSN YAA G W+E AR R
Sbjct: 377 PTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARAR 436

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
           K+M D+ +KKE G SW+E  N+ ++F AGD SH ++ +IY KLEEL   +  AGY  DTS
Sbjct: 437 KMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTS 496

Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
           +VL+++D + K   +  HSERLAIAFGL+  P   P++++KNLRVCGDCHT IK ISK  
Sbjct: 497 FVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCT 556

Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
            R I+VRD NRFH F++G C+CGDYW
Sbjct: 557 GRVIIVRDNNRFHRFEDGKCTCGDYW 582



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 169/374 (45%), Gaps = 8/374 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H + +K GF     V   L++ Y +TN      ++FD     +  +W+S++S +A+
Sbjct: 26  GLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQ 85

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N +    L  F RM   G+ P+  T  T    +A    +  A+ +H + +K        V
Sbjct: 86  NDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFV 145

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+  Y K   V  AR VFD M  ++ ++W+ M+ GY    L  EA   F        
Sbjct: 146 GSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDY 205

Query: 277 ELTRSTFV--SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           ++  + F   SV+++C+ +    L +Q+H    K   D    + + L+  YSKCG +E  
Sbjct: 206 DIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGG 265

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            K+F  ++ ++++  W AM+    Q+         F +M R GV+PN  T+  +L A   
Sbjct: 266 YKVFEEVK-VRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSH 324

Query: 395 VSPFQVHAHIIKTNYEKSFSVGT----ALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSA 449
               +   H      E     G+     L++   + G L+EA  V  E+  +     W A
Sbjct: 325 AGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGA 384

Query: 450 MLAGYAQIGDTEGA 463
           +L G    G+TE A
Sbjct: 385 LLTGCRIHGNTELA 398



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 160/348 (45%), Gaps = 7/348 (2%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK +       LFD  P ++   ++ ++  + ++ L   AL  F  + R GL     T
Sbjct: 51  FYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHT 110

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L +  K+   L        +H   +K+    DV V +SLVD Y +  +V   R+VFD+M 
Sbjct: 111 LPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMP 170

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGIVATA 198
             NVVSW+ ++ GY++  +++  L LF R   Q   I+ N FT S+VL V +   +    
Sbjct: 171 HKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELG 230

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            QVH +  K   +    V ++LIS+Y K  +V     VF+ ++ R+   WN+M+     +
Sbjct: 231 KQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQH 290

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
                 FE F  M   G +    TF+ ++  C+    +         + ++GI+      
Sbjct: 291 AHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHY 350

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
             L+    + GK+E+A  +   M        W A+++G   +G  +LA
Sbjct: 351 ATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELA 398


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/656 (35%), Positives = 369/656 (56%), Gaps = 51/656 (7%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VF+ +++ + + WN+M  G+  +   + A + +  M   G      TF  ++K CA 
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAK 115

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS------------- 339
            K  +  +Q+H  VLK G + D  + T L+  Y K G+ +DA K+F              
Sbjct: 116 LKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTAL 175

Query: 340 ---------------MMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                          M  E+  KDVVSW A+ISG+   G    A++ F +M +  V+P+ 
Sbjct: 176 ITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T   +++A       Q    VH+ I       +  +  AL++ Y K G ++ A  +F+ 
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           +  KD+++W+ M+ GY  +   + A+ +++++   G  PN+ T  S++ AC A   A++ 
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPAC-AQLGAIDF 354

Query: 499 GKQFHACSIK--AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           G+  H    K    + NA  + ++L+ MY+K G+IE+A +VF     R L + N+MI G+
Sbjct: 355 GRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGF 414

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A HG    A ++F  MR+  +E D ITF+G+++AC+H+G++D G++ F  M   + I P 
Sbjct: 415 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPK 474

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LI 662
           +EHY CM+DL    G+ ++A ++IN M       +W ++L AC+              LI
Sbjct: 475 LEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLI 534

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            ++P +   YVLLSN+YA  G W E A +R L+ND+ +KK  G S IE+ +  + F+ GD
Sbjct: 535 KIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
             HP++ +IY  LEE+   L++AG+ PDTS VLQ++++E K+  L  HSE+LAIAFGL++
Sbjct: 595 KFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLIS 654

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T  G  L IVKNLRVC +CH   KLISK+ +R+I+ RD  RFHHF++G+CSC DYW
Sbjct: 655 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 236/521 (45%), Gaps = 49/521 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N +   +   S    A+ L++ +  LGL     T   +LK+C  L 
Sbjct: 58  SVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLK 117

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+Q+H   +K G+  D+ V TSL+ +Y++    +D  +VFD  +  +VVS+T+L++
Sbjct: 118 VSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALIT 177

Query: 153 GYAR-------NKMNDRV------------------------LELFHRMQVEGIKPNSFT 181
           GYA         KM D +                        L+LF  M    +KP+  T
Sbjct: 178 GYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDEST 237

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             TV+   A  G +    QVH+ +  +G      + NALI +Y K   V  A  +F G+ 
Sbjct: 238 MVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS 297

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           ++D I+WN+M+ GY    L+ EA   F  M  +G      T +S++  CA    +   R 
Sbjct: 298 NKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    ++RT L+  Y+KCG +E A ++F+ M   + + +  AMI G   
Sbjct: 358 IHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHH-RTLSACNAMIFGFAM 416

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYEKSFSVG 416
           +G  + A + F +M + G+ P+  T+  +L+A        +   I ++   NY+ +  + 
Sbjct: 417 HGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLE 476

Query: 417 --TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS- 472
               +++     G+  EA ++   +  E D V W ++L      G+ E      ++L   
Sbjct: 477 HYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKI 536

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           E   P  +   S I A          G+     +I+A LN+
Sbjct: 537 EPENPGSYVLLSNIYATA--------GRWNEVANIRALLND 569



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 203/404 (50%), Gaps = 54/404 (13%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC------GKMEDASKI 337
           +S++  C T + LR+   +H+Q++K G+   HN    L      C        +  A  +
Sbjct: 6   LSLLHNCKTLQSLRI---IHAQMIKTGL---HNTNYALSRLLEFCILSPNFDGLPYAISV 59

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL--TAQPAV 395
           F  ++E  +++ W  M  GH  +     A+  +  M   G+ PN +T+  +L   A+  V
Sbjct: 60  FETIQE-PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKV 118

Query: 396 SP--FQVHAHIIKTNYEKSFSVGTALLNAYVK---------------------------- 425
           S    Q+H H++K  YE    V T+L++ YVK                            
Sbjct: 119 SKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG 178

Query: 426 ---KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
              +G ++ A K+F+ I  KD+V+W+A+++GYA  G+ + A+ +++++    VKP+E T 
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            +V++AC A S +++ G+Q H+      L + L + +AL+ +YSK G +E+A  +F+   
Sbjct: 239 VTVVSAC-AQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLS 297

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            +D++SWN+MI GY      K+AL +F+EM R     + +T + ++ AC   G +D G+ 
Sbjct: 298 NKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357

Query: 603 ---YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
              Y D  +    +       + ++D+Y++ G +E A  + N M
Sbjct: 358 IHVYIDKRIKG--VTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 156/346 (45%), Gaps = 3/346 (0%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y +  Q +FD  P ++ V +N ++  Y     ++EAL+LF  + +  +    ST+ +V+ 
Sbjct: 184 YIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVS 243

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        GRQVH      G   ++ +  +L+DLY +   VE    +F  ++  +V+S
Sbjct: 244 ACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVIS 303

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +++ GY    +    L LF  M   G  PN  T  ++L   A  G +     +H  + 
Sbjct: 304 WNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYID 363

Query: 207 K--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           K   G    +S+  +LI MY K   +  A  VF+ M  R     N+M+ G+  +     A
Sbjct: 364 KRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAA 423

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV- 323
           F+ F+ M   G E    TFV ++  C+ +  L L R++   + +N          G M+ 
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMID 483

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
                G  ++A ++ + M    D V W +++     +G ++L  +F
Sbjct: 484 LLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESF 529


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/779 (30%), Positives = 415/779 (53%), Gaps = 25/779 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF   P+RN V +  L+     +   +E L  +  +RR G+P   +  ++V+  CG L +
Sbjct: 101 LFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLEN 160

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            V G QV    + SG    V+V+ SL+ ++     V+D  ++FD M E + +S  +++S 
Sbjct: 161 EVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISM 220

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y+   +  +   +F  M+  G++P++ T  +++ V A     +    +H++ +++  +  
Sbjct: 221 YSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSS 280

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            +V NAL++MY  +  + DA  +F  M  RD I+WN+M++ YV N    +A +T   +  
Sbjct: 281 VTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFH 340

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   TF S +  C++   L   + +H+ VL+  +  +  +   L+  Y KC  MED
Sbjct: 341 TNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMED 400

Query: 334 ASKIFSMMREMKDVVSWTAMISGH--LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           A K+F  M    DVVS+  +I G+  L++G    A+  F  +   G++PN  T   I  +
Sbjct: 401 AEKVFQSM-PTHDVVSYNVLIGGYAVLEDGT--KAMQVFSWIRSAGIKPNYITMINIHGS 457

Query: 392 QPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
             + +        +HA+II+T +     V  +L+  Y K G L+ +  +F  I  K+IV+
Sbjct: 458 FTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVS 517

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+A++A  AQ+G  E A+K++  +   G K +    +  +++C A  A++E+G Q H   
Sbjct: 518 WNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSC-ASLASLEEGMQLHGLG 576

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +K+ L++   V +A + MY K G +    ++   Q  R    WN++I GYA++G+ K+A 
Sbjct: 577 MKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAE 636

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           E FK+M     + D +TF+ +++AC+HAGLVD+G  Y++ M +   + P ++H  C+VDL
Sbjct: 637 ETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDL 696

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQPHDSAIY 672
             R G   +A   I  MP   +  +WR++L              AA +L+ L P D + Y
Sbjct: 697 LGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAY 756

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           VLLSN+YA    W +  ++R  M    + K    SW+++KN+  +F  GD  H  + +IY
Sbjct: 757 VLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIY 816

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           +KL+E+  +L++ GY  DTS  L D D+E KE  L  HSE+LA+A+GL+  P G+  Q+
Sbjct: 817 AKLDEMLLKLREVGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVPEGSTCQM 875



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 163/548 (29%), Positives = 292/548 (53%), Gaps = 8/548 (1%)

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTC---GCLFDHVFGRQVHCECVKSGFARDVNVSTS 118
           A  L  G+R  G+PL G  L+S++  C   G       G  +H    ++G   +V + T+
Sbjct: 25  AFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTA 84

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+ LY     V D RR+F +M E NVVSWT+L+   + N   +  L  + +M+ EG+  N
Sbjct: 85  LLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCN 144

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           +  F+TV+ +          +QV + VI +G +   SV N+LI+M+     V+DA  +FD
Sbjct: 145 ANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFD 204

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            ME+ D+I+ N+M++ Y    +  + F  F++M   G     +T  S++ +CA+      
Sbjct: 205 RMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSH 264

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
              +HS  L++ +D    +   L+  YS  GK+ DA  +F  M   +D++SW  MIS ++
Sbjct: 265 GSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSR-RDLISWNTMISSYV 323

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--QPA--VSPFQVHAHIIKTNYEKSFS 414
           QN     A+    Q+      PN  T+S  L A   P   +    VHA +++ + +++  
Sbjct: 324 QNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLL 383

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           VG +L+  Y K   +++A KVF+ +   D+V+++ ++ GYA + D   A++++  + S G
Sbjct: 384 VGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAG 443

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +KPN  T  ++  + T+ +     G+  HA  I+    +   V+++L+TMY+K GN+ES+
Sbjct: 444 IKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESS 503

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
           + +F     +++VSWN++I   AQ GH ++AL++F +M+    + D +     +++C   
Sbjct: 504 TNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASL 563

Query: 595 GLVDEGQQ 602
             ++EG Q
Sbjct: 564 ASLEEGMQ 571



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/568 (23%), Positives = 276/568 (48%), Gaps = 37/568 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFDR  + + +  N ++  Y    +  +   +F  +R  GL    +TL S++  C   
Sbjct: 200 EKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASA 259

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G  +H  C++S     V V  +LV++Y     + D   +F +M+  +++SW +++
Sbjct: 260 DHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMI 319

Query: 152 SGYARNKMNDRVL----ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           S Y +N  +   L    +LFH  ++    PN  TFS+ LG  +  G +     VH +V++
Sbjct: 320 SSYVQNCNSTDALKTLGQLFHTNEI----PNHLTFSSALGACSSPGALIDGKMVHAIVLQ 375

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              +    V N+LI+MY K   + DA  VF  M   D +++N ++ GY   E   +A + 
Sbjct: 376 LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQV 435

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELR-LARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           F+ +  AG +    T +++     ++ +L    R LH+ +++ G   D  +   L+  Y+
Sbjct: 436 FSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYA 495

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG +E ++ IF+ +   K++VSW A+I+ + Q G  + A+  F  M   G + +    +
Sbjct: 496 KCGNLESSTNIFNSITN-KNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLA 554

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             L++  +++      Q+H   +K+  +    V  A ++ Y K G ++E   + +++ ++
Sbjct: 555 ECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNE---MLQMVPDQ 611

Query: 443 DI---VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
            I     W+ +++GYA+ G  + A + ++Q+ + G KP+  TF ++++AC+  +  V++G
Sbjct: 612 AIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSH-AGLVDKG 670

Query: 500 KQFH-----ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR--KRDLVSWNSM 552
             ++     +  +   + + +C+    V +  + G    A    +       DL+ W S+
Sbjct: 671 IDYYNSMASSFGVSPGIKHCVCI----VDLLGRLGRFAEAERFIEEMPVLPNDLI-WRSL 725

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           +     H    K LE+ ++  ++ LE D
Sbjct: 726 LSSSRTH----KNLEIGRKAAKKLLELD 749



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 204/412 (49%), Gaps = 10/412 (2%)

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC---ATTKEL 296
           M DR   TW + V+G V     + AFE    M   G  L+     S++  C      + +
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
                +H+   + G+  +  I T L+  Y   G + DA ++F  M E ++VVSWTA++  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPE-RNVVSWTALMVA 119

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL----TAQPAVSPFQVHAHIIKTNYEKS 412
              NG ++  +  + QM REGV  N   ++ ++    + +  V   QV +H+I +  +  
Sbjct: 120 LSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQ 179

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            SV  +L+  +   G + +A K+F+ ++E D ++ +AM++ Y+  G       ++  +  
Sbjct: 180 VSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRH 239

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
            G++P+  T  S+++ C A +     G   H+  +++ L++++ V +ALV MYS  G + 
Sbjct: 240 HGLRPDATTLCSLMSVC-ASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
            A  +F    +RDL+SWN+MI  Y Q+ ++  AL+   ++   +   + +TF   + AC+
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACS 358

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             G + +G+    I++ +  +   +   + ++ +Y +   +E A  +   MP
Sbjct: 359 SPGALIDGKMVHAIVL-QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 409


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/567 (40%), Positives = 345/567 (60%), Gaps = 27/567 (4%)

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           ++ LR   QLH+ +LK G+     +   L+  YSK      + ++F    + K   +W++
Sbjct: 38  SRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPK-KSSTTWSS 96

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------VHAHII 405
           +IS   QN A  LA+ FF +M  +GVRP+   Y    +A  A    +       VH   +
Sbjct: 97  VISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYP---SATKACGFLRRSDVGKSVHCLAV 153

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           KT Y     VG++L++ Y K G + +A  +F+ + E+++V+WS M+ GYAQ+ D   A+ 
Sbjct: 154 KTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALT 213

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           +++Q   E V  N+FTFSSVI  C++ S  +E GK  H   +K   +++  V SAL+++Y
Sbjct: 214 LFKQALIEDVDVNDFTFSSVIRVCSS-STFLELGKLIHGLCLKMSFDSSSFVGSALISLY 272

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           SK G IE A +VF     R+L  WNSM+   AQH HT++   +F+EM    ++ + I F+
Sbjct: 273 SKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFL 332

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
            V+ AC+HAGLV++G++YF +M  ++ I P  EHY+ +VDL  RAG L++A+ +I +MP 
Sbjct: 333 SVLYACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPM 391

Query: 646 AASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARV 691
             + +VW  +L  CR+              + +    S ++VLLSN YAA G ++E AR+
Sbjct: 392 RPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARM 451

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           RK++ DR VKKE G SW+E  NK ++F AGD SH +  +IY KLEEL   ++ AGY  DT
Sbjct: 452 RKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADT 511

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           S+VL+ +D E K   +  HSERLAIAFGL+  P G P++++KNLRVCGDCH  IK +SK 
Sbjct: 512 SFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKC 571

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             R ++VRD NRFH F++G CSCGDYW
Sbjct: 572 CGRVLIVRDNNRFHRFEDGKCSCGDYW 598



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 196/390 (50%), Gaps = 7/390 (1%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
            +Q+H  ++K G + +  V + LI++Y K+++   +  VFD    + S TW+S+++ +  
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           NE  + A + F  M   G       + S  K C   +   + + +H   +K G   D  +
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            + L+  Y+KCG++ DA  +F  M E ++VVSW+ MI G+ Q      A+  F Q   E 
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPE-RNVVSWSGMIYGYAQLDDGVEALTLFKQALIED 222

Query: 378 VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           V  N FT+S ++    + +  +    +H   +K +++ S  VG+AL++ Y K G+++ A 
Sbjct: 223 VDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAY 282

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF+ I  +++  W++ML   AQ   T+    ++ ++ + G+KPN   F SV+ AC+  +
Sbjct: 283 QVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSH-A 341

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSM 552
             VE+G+++ +      +       ++LV +  + G ++ A  V K+   R   S W ++
Sbjct: 342 GLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGAL 401

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           + G   H  T+ A  V   +   D    G+
Sbjct: 402 LTGCRIHKDTEMAAFVADRILEMDSSSSGL 431



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 3/332 (0%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           P +S +   +FD +P+++   ++ ++  + ++     AL  F  +   G+        S 
Sbjct: 76  PLFSLQ---VFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSA 132

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
            K CG L     G+ VHC  VK+G+  DV V +SLVD+Y +   + D R +FD+M E NV
Sbjct: 133 TKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNV 192

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSW+ ++ GYA+       L LF +  +E +  N FTFS+V+ V +    +     +H +
Sbjct: 193 VSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGL 252

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            +K   +  + V +ALIS+Y K  ++  A  VFD +  R+   WNSM+     +      
Sbjct: 253 CLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRV 312

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
           F  F  MG  G +     F+SV+  C+    +   R+  S +   GI+ +      L+  
Sbjct: 313 FGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDL 372

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
             + GK+++A  +   M        W A+++G
Sbjct: 373 LGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 178/379 (46%), Gaps = 20/379 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H   +K G      VS +L++LY +T       +VFD+  + +  +W+S++S +A+
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N+     L+ F RM  +G++P+   + +                VH + +K G      V
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L+ MY K   + DAR +FD M +R+ ++W+ M+ GY   +  +EA   F    +   
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           ++   TF SVI++C+++  L L + +H   LK   D    + + L+  YSKCG +E A +
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  +   +++  W +M+    Q+         F +M   G++PN   +  +L A     
Sbjct: 284 VFDEI-PTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACS--- 339

Query: 397 PFQVHAHIIKTNYE-----KSFSVG------TALLNAYVKKGILDEAAKVFELIDEKDIV 445
               HA +++   E     + + +        +L++   + G L EA  V + +  +   
Sbjct: 340 ----HAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTE 395

Query: 446 A-WSAMLAGYAQIGDTEGA 463
           + W A+L G     DTE A
Sbjct: 396 SVWGALLTGCRIHKDTEMA 414


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 249/692 (35%), Positives = 367/692 (53%), Gaps = 77/692 (11%)

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGM-------EDRDSITWNSMVAGYVTN-------E 259
           T + NA+IS Y ++     A AVF  +        D  S T      G++ N       +
Sbjct: 121 TVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQ 180

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           LH    ++    G  GA    +  V++   C + +  R AR+    VL    + D    T
Sbjct: 181 LHCSVLKS----GAGGALSVCNALVALYMKCESPEATRDARK----VLDEMPNKDDLTWT 232

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            ++V Y + G +  A  +F  +    DVV W AMISG++ +G    A   F +M  E V 
Sbjct: 233 TMVVGYVRRGDVGAARSVFEEVDGKFDVV-WNAMISGYVHSGMAVEAFELFRRMVLERVP 291

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIK------------------TNYEKSFSVGT 417
            + FT++ +L+A   V  F     VH  II+                  T Y K  ++  
Sbjct: 292 LDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAV 351

Query: 418 A-----------------LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           A                 +L+ YV+   LD+A +VFE +  K+ ++W  M++GY   G  
Sbjct: 352 ARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFA 411

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           E A+K++ ++ SE VKP ++T++  I AC     A++ GKQ H   ++     +    +A
Sbjct: 412 EDALKLFNKMRSENVKPCDYTYAGAIAAC-GELGALKHGKQLHGHIVQLGFEGSNSAGNA 470

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+TMY++ G ++ A  +F      D VSWN+MI    QHGH ++ALE+F  M  + +  D
Sbjct: 471 LITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPD 530

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            I+F+ V+TAC H+GLVDEG +YF+ M  +  I P  +HY+ ++DL  RAG + +A D+I
Sbjct: 531 RISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLI 590

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
             MPF  + ++W  +L+ CR              L  + P     Y+LLSN Y+A G W 
Sbjct: 591 KTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWV 650

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + ARVRKLM DR VKKE G SWIE  NK + FL GD  HP+++++Y  LE +  +++  G
Sbjct: 651 DAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLG 710

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PDT  VL D++   KE IL  HSERLA+ FGL+  P GA + ++KNLR+C DCH  I 
Sbjct: 711 YVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIM 770

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +SK   R+IVVRD  RFHHFK+G CSCG+YW
Sbjct: 771 FMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 141/560 (25%), Positives = 249/560 (44%), Gaps = 83/560 (14%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNES--NVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
           +TSLV  Y   + +      FD +  +  + V   +++S YAR       + +F  +   
Sbjct: 91  ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 174 G-IKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK--- 226
           G ++P+ ++F+ +L   G L +  +   A Q+H  V+K+G     SVCNAL+++Y+K   
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCA-QLHCSVLKSGAGGALSVCNALVALYMKCES 209

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMV-------------------------------AGY 255
            +  RDAR V D M ++D +TW +MV                               +GY
Sbjct: 210 PEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGY 269

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           V + + +EAFE F  M L    L   TF SV+  CA        + +H Q+++   +F  
Sbjct: 270 VHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVP 329

Query: 316 N----IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV---- 367
                +   L+  YSKCG +  A +IF  M  +KDVVSW  ++SG++++  +D AV    
Sbjct: 330 EAALPVNNALVTFYSKCGNIAVARRIFDNM-TLKDVVSWNTILSGYVESSCLDKAVEVFE 388

Query: 368 ---------------------------NFFCQMTREGVRPNGFTYSIILTAQPAVSPF-- 398
                                        F +M  E V+P  +TY+  + A   +     
Sbjct: 389 EMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKH 448

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             Q+H HI++  +E S S G AL+  Y + G + EA  +F ++   D V+W+AM++   Q
Sbjct: 449 GKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQ 508

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G    A++++ ++ +EG+ P+  +F +V+ AC       E  + F +      +     
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGED 568

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKALEVFKEMRRQ 575
             + L+ +  + G I  A ++ K        S W +++ G    G  +       ++ + 
Sbjct: 569 HYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKM 628

Query: 576 DLEFDGITFIGVITACTHAG 595
             + DG T+I +    + AG
Sbjct: 629 TPQHDG-TYILLSNTYSAAG 647



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 226/525 (43%), Gaps = 95/525 (18%)

Query: 33  SLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
           S FD  P  +R+ V +N ++  Y R S    A+ +F  +   G         + L + G 
Sbjct: 109 SFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGG 168

Query: 91  LFDHVFGR---QVHCECVKSGFARDVNVSTSLVDLYMRTNNVE---DGRRVFDDMNESNV 144
              ++  R   Q+HC  +KSG    ++V  +LV LYM+  + E   D R+V D+M   + 
Sbjct: 169 HLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDD 228

Query: 145 VSWTSL-------------------------------LSGYARNKMNDRVLELFHRMQVE 173
           ++WT++                               +SGY  + M     ELF RM +E
Sbjct: 229 LTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLE 288

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG----GEVVTSVCNALISMYLKSKM 229
            +  + FTF++VL   A+ G+ A    VH  +I+       E    V NAL++ Y K   
Sbjct: 289 RVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGN 348

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYV-----------------TNELHM---------- 262
           +  AR +FD M  +D ++WN++++GYV                  NEL            
Sbjct: 349 IAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHG 408

Query: 263 ----EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               +A + FN M     +    T+   I  C     L+  +QLH  +++ G +  ++  
Sbjct: 409 GFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAG 468

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y++CG +++A  +F +M  + D VSW AMIS   Q+G    A+  F +M  EG+
Sbjct: 469 NALITMYARCGAVKEAHLMFLVMPNI-DSVSWNAMISALGQHGHGREALELFDRMVAEGI 527

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNY------EKSFSV------GTALLNAYVKK 426
            P+  ++  +LTA         H+ ++   +      ++ F +       T L++   + 
Sbjct: 528 YPDRISFLTVLTACN-------HSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRA 580

Query: 427 GILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           G + EA  + + +  E     W A+L+G    GD E       QL
Sbjct: 581 GRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQL 625



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 166/338 (49%), Gaps = 51/338 (15%)

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMK-DVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
           T L+ AY+   ++  A   F  +   + D V   A+IS + +      AV  F  +   G
Sbjct: 92  TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 378 -VRPNGFTYSIILTAQ---PAVSP---FQVHAHIIKTNYEKSFSVGTALLNAYVK----- 425
            +RP+ ++++ +L+A    P +S     Q+H  ++K+    + SV  AL+  Y+K     
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211

Query: 426 -----KGILDE------------------------AAKVFELIDEKDIVAWSAMLAGYAQ 456
                + +LDE                        A  VFE +D K  V W+AM++GY  
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN---- 512
            G    A +++R++  E V  +EFTF+SV++AC A       GK  H   I+ + N    
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSAC-ANVGLFAHGKSVHGQIIRLQPNFVPE 330

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            AL V++ALVT YSK GNI  A  +F     +D+VSWN+++ GY +     KA+EVF+EM
Sbjct: 331 AALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
             +    + ++++ +++   H G  ++  + F+ M +E
Sbjct: 391 PYK----NELSWMVMVSGYVHGGFAEDALKLFNKMRSE 424



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 183/398 (45%), Gaps = 47/398 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL---PLFGSTLSSVLKTC 88
           +S+F+    +  V +N ++  Y    +  EA  LF   RR+ L   PL   T +SVL  C
Sbjct: 248 RSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELF---RRMVLERVPLDEFTFTSVLSAC 304

Query: 89  G--CLFDHVFGRQVHCECVK--SGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
               LF H  G+ VH + ++    F  +  + V+ +LV  Y +  N+   RR+FD+M   
Sbjct: 305 ANVGLFAH--GKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK 362

Query: 143 NVVSWTSLLSGYARNKMNDRVLE-------------------------------LFHRMQ 171
           +VVSW ++LSGY  +   D+ +E                               LF++M+
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMR 422

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
            E +KP  +T++  +    + G +    Q+H  +++ G E   S  NALI+MY +   V+
Sbjct: 423 SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVK 482

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +A  +F  M + DS++WN+M++    +    EA E F+ M   G    R +F++V+  C 
Sbjct: 483 EAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542

Query: 292 TTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
            +  +    R   S     GI    +  T L+    + G++ +A  +   M        W
Sbjct: 543 HSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            A++SG   +G ++L  +   Q+ +   + +G TY ++
Sbjct: 603 EAILSGCRTSGDMELGAHAADQLFKMTPQHDG-TYILL 639



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 4/232 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K   +F+  P +N + +  ++  Y      ++AL LF  +R   +     T +  +  CG
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACG 441

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G+Q+H   V+ GF    +   +L+ +Y R   V++   +F  M   + VSW +
Sbjct: 442 ELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNA 501

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++S   ++      LELF RM  EGI P+  +F TVL      G+V    +    + ++ 
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDF 561

Query: 210 GEVV-TSVCNALISMYLKSKMVRDARAVFDGM--EDRDSITWNSMVAGYVTN 258
           G +        LI +  ++  + +AR +   M  E   SI W ++++G  T+
Sbjct: 562 GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI-WEAILSGCRTS 612


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/753 (32%), Positives = 398/753 (52%), Gaps = 38/753 (5%)

Query: 109 FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
           FA D  +   +V+ Y +   V+D R VF  +   NV SWT LL+ YA+N  +  VLEL  
Sbjct: 112 FAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171

Query: 169 RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV-CNALISMYLKS 227
           +M + G+ PN+ T +TV+G +++ G    A ++H             V   ALI MY K 
Sbjct: 172 QMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKC 231

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
             +  A  VFD   ++D    N+M++ Y+     ++A  TFN +  +G +  + T+  + 
Sbjct: 232 GDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLF 291

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           + CAT      AR  H   + + +  D  + T L+  YS+CG +EDA ++F  M   K+V
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRM-PGKNV 350

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT----AQPAVSPFQVHAH 403
           V+W  MI+G+ Q G  D A+  +  M   GV P+  T+  +L     A+   +   +H H
Sbjct: 351 VTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKH 410

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE--LIDEKDIVAWSAMLAGYAQIGDTE 461
           ++   Y+ S +V +AL+  Y   G L +A  VF   +     +++W+AML    + G+  
Sbjct: 411 VVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGR 470

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+ ++R++  EGV+ N  TF S I+AC++  A VE    F    +   L + + + ++L
Sbjct: 471 SALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVV-LGTSL 529

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + +Y K G ++ A EVF     +++V+WN+++   +Q+G    + E+ +EM     + + 
Sbjct: 530 INLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNE 589

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           +T + ++  C+H GLV +   YF  MV  H + PT EHY C+VDL  R+G LE+    I+
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFIS 649

Query: 642 RMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQE 687
             PF+  + +W ++L +C              R++ L P +++ YVLLSNM+AA G    
Sbjct: 650 SKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDA 709

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
              + KL  +R +KKE   S+IEV    + F      H    +I ++L E S  +++AG+
Sbjct: 710 VKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGF 769

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            P     L D+           H E+LAIAFG +++P G PL +VKNLR+C  CH  IK 
Sbjct: 770 VP-----LHDVR--------GYHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKH 816

Query: 808 ISKLERRDIVVRDTNRFHHFK--EGLCSCGDYW 838
           I K+  RDI VR+ NR HHF+  +  CSCGDYW
Sbjct: 817 ICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 256/555 (46%), Gaps = 7/555 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +F      N   +  LL  Y ++  H+  L L   +  LG+     TL++V+   
Sbjct: 133 KDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAV 192

Query: 89  GCLFDHVFGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             L +    R++H     +     DV + T+L+D+Y +  ++     VFD     ++   
Sbjct: 193 SELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACC 252

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
            +++S Y +       +  F+R+Q  G++PN  T++ +    A  G+ + A   H   I 
Sbjct: 253 NAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFIL 312

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +       V  AL+SMY +   + DAR VFD M  ++ +TWN M+AGY       EA + 
Sbjct: 313 SKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQL 372

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           + +M  AG E    TFV+V++ C+  + L   R +H  V+  G D    + + L+  YS 
Sbjct: 373 YVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSA 432

Query: 328 CGKMEDASKIFSM-MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           CG + DA  +F   +     V+SWTAM++   +NG    A+  F +M  EGVR N  T+ 
Sbjct: 433 CGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFV 492

Query: 387 IILTAQPAVSPF-QVHA---HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             + A  ++    + HA    +I T +     +GT+L+N Y K G LD A +VF  +  K
Sbjct: 493 STIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFK 552

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           +IV W+ +LA  +Q G+   + ++ +++  +G +PNE T  +++  C+      +    F
Sbjct: 553 NIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYF 612

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGH 561
            +      L         LV +  + G +E     +  +    D V W S++     H  
Sbjct: 613 RSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSD 672

Query: 562 TKKALEVFKEMRRQD 576
            ++ L   + +   D
Sbjct: 673 VERGLRAARRVLGLD 687


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/651 (34%), Positives = 368/651 (56%), Gaps = 21/651 (3%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D+  + + + + ++TN+++D R +FD + + + VSWT+++SGY  +  +   L LF +M+
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 172 VEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           ++  ++ + F  S  L              +H   +K G      V +AL+ MY+K   +
Sbjct: 108 LQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEI 167

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             +  VFD M  R+++TW +++ G V           F+ MG +  E     +   +K  
Sbjct: 168 GRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKAS 227

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A +  L   R +H+Q LK G D +  +   L   Y+KCGK++     F  MR + DVVSW
Sbjct: 228 ADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL-DVVSW 286

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
           T +++ ++Q G  D  +  F +M    V PN +T+S +++     +      Q+HAH++ 
Sbjct: 287 TTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLC 346

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
             +  + SV  +++  Y K G L   +KVF  +  +DI+ WS ++A Y+Q+G  E A + 
Sbjct: 347 VGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEY 406

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
             ++ SEG KPNEF  +SV++ C    A +EQGKQ HA  +   L     V SAL+ MY+
Sbjct: 407 LSRMRSEGPKPNEFALASVLSVC-GSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYA 465

Query: 527 KKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           K G+I  AS++F    K D++SW +MI GYA+HGH+++A+E+F+ +++  L  D +TFIG
Sbjct: 466 KCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIG 525

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V+TAC+HAG+VD G  YF+ M  ++HI P+ EHY CM+DL  RAG L  A  +I  MP  
Sbjct: 526 VLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQ 585

Query: 647 ASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
               VW T+L ACR+              + L P+ +  ++ L+N++AA G W+E A +R
Sbjct: 586 WDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIR 645

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            LM  + V KE G+S ++VK+  ++F++GD SHPQ   IY+ LEEL++ ++
Sbjct: 646 MLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 276/552 (50%), Gaps = 11/552 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVLKT 87
           K  + LFD+ PQR+ V +  ++  Y   S   EAL LF  +R +  L +    LS  LKT
Sbjct: 66  KDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKT 125

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           CG   ++++G  +H   VK G    V V ++L+D+YM+   +    +VFD+M   N V+W
Sbjct: 126 CGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTW 185

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T++++G  R   ++  L  F  M    ++ +S+ ++  L   AD G +     +HT  +K
Sbjct: 186 TAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLK 245

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G +  + V N+L +MY K   +      F  M   D ++W ++V  Y+         + 
Sbjct: 246 KGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQA 305

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  M  +       TF +VI  CA    L+   QLH+ VL  G     ++   +M  YSK
Sbjct: 306 FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSK 365

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG++   SK+F  M+  +D+++W+ +I+ + Q G  + A  +  +M  EG +PN F  + 
Sbjct: 366 CGELASVSKVFCSMK-FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALAS 424

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L+   +++      Q+HAH++    E++  V +AL+  Y K G + EA+K+F    + D
Sbjct: 425 VLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDD 484

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           I++W+AM++GYA+ G ++ A++++  +   G++P+  TF  V+ AC+           F+
Sbjct: 485 IISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFN 544

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
           + S    +  +      ++ +  + G +  A  + +    + D V W++++     HG  
Sbjct: 545 SMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDV 604

Query: 563 ----KKALEVFK 570
               + A EV K
Sbjct: 605 DCGQRAAAEVLK 616


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/677 (34%), Positives = 396/677 (58%), Gaps = 23/677 (3%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H + + SG   D  ++  L+++  +++ V++ R VFD M   N+++W+S++S Y++   
Sbjct: 71  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 130

Query: 160 NDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           ++  L +F  +Q + G  PN F  ++V+      G+V    Q+H  V+++G +    V  
Sbjct: 131 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 190

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +LI  Y K+  + +AR VFD + ++ ++TW +++AGY        + E F  M       
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            R    SV+  C+  + L   +Q+H+ VL+ G + D ++   L+  Y+KC +++   K+F
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 310

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M  +K+++SWT MISG++QN     A+  F +M R G +P+GF  + +LT+  +    
Sbjct: 311 DQMV-VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREAL 369

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               QVHA+ IK N E    V   L++ Y K  +L +A KVF+++ E+++++++AM+ GY
Sbjct: 370 EQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGY 429

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +       A++++ ++     KPNEFTF+++I A +   A++  G+QFH   +K  L+  
Sbjct: 430 SSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNL-ASLRHGQQFHNQLVKMGLDFC 488

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V++ALV MY+K G+IE A ++F     RD+V WNSMI  +AQHG  ++AL +F+EM +
Sbjct: 489 PFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK 548

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           + ++ + +TF+ V++AC+HAG V++G  +F+ M     I P  EHY+C+V L  R+G L 
Sbjct: 549 EGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLF 607

Query: 635 KAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYA 680
           +A + I +MP   +A VWR++L+ACR+              IS  P DS  Y+LLSN++A
Sbjct: 608 EAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFA 667

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           + G W +  +VR  M+  +V KE G SWIEV NK   F+A D +H +++ I S L+ L  
Sbjct: 668 SKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREAD-IGSVLDILIQ 726

Query: 741 RLKDAGYKPDTSYVLQD 757
            +K AGY PD + +L +
Sbjct: 727 HIKGAGYVPDATALLMN 743



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 160/530 (30%), Positives = 287/530 (54%), Gaps = 16/530 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCLF 92
           +FD+ P +N + ++ ++  Y +    +EAL +F+ + R+ G       L+SV++ C  L 
Sbjct: 106 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 165

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G Q+H   V+SGF +DV V TSL+D Y +  N+E+ R VFD ++E   V+WT++++
Sbjct: 166 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 225

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY +   +   LELF +M+   + P+ +  S+VL   +    +    Q+H  V++ G E+
Sbjct: 226 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 285

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             SV N LI  Y K   V+  R +FD M  ++ I+W +M++GY+ N    EA + F  M 
Sbjct: 286 DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMN 345

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G +       SV+  C + + L   RQ+H+  +K  ++ D  ++ GL+  Y+K   + 
Sbjct: 346 RLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLI 405

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA K+F +M E ++V+S+ AMI G+     +  A+  F +M     +PN FT++ ++TA 
Sbjct: 406 DAKKVFDVMAE-QNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAA 464

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             ++      Q H  ++K   +    V  AL++ Y K G ++EA K+F     +D+V W+
Sbjct: 465 SNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWN 524

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-KQFHAC-- 505
           +M++ +AQ G+ E A+ ++R++  EG++PN  TF +V++AC+  +  VE G   F++   
Sbjct: 525 SMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSH-AGRVEDGLNHFNSMPG 583

Query: 506 -SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
             IK    +  CV    V++  + G +  A E  ++   +   + W S++
Sbjct: 584 FGIKPGTEHYACV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 629



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 265/500 (53%), Gaps = 17/500 (3%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           +Q+  ++P    F+ +L +      +     +H  +I +G +  T + N LI++  KS  
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL-AGAELTRSTFVSVIK 288
           V +AR VFD M  ++ ITW+SMV+ Y       EA   F ++   +G         SVI+
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            C     +    QLH  V+++G D D  + T L+  YSK G +E+A  +F  + E K  V
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE-KTAV 218

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHI 404
           +WT +I+G+ + G   +++  F QM    V P+ +  S +L+A   +       Q+HA++
Sbjct: 219 TWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 278

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           ++   E   SV   L++ Y K   +    K+F+ +  K+I++W+ M++GY Q      A+
Sbjct: 279 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAM 338

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           K++ ++   G KP+ F  +SV+ +C     A+EQG+Q HA +IKA L +   V + L+ M
Sbjct: 339 KLFGEMNRLGWKPDGFACTSVLTSC-GSREALEQGRQVHAYTIKANLESDEFVKNGLIDM 397

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K   +  A +VF    +++++S+N+MI GY+      +ALE+F EMR +  + +  TF
Sbjct: 398 YAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTF 457

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIY-PTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
             +ITA ++   +  GQQ+ + +V     + P + +   +VD+Y++ G +E+A  + N  
Sbjct: 458 AALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFN-- 513

Query: 644 PFAASATVWRTVLAACRLIS 663
                +++WR V+    +IS
Sbjct: 514 -----SSIWRDVVCWNSMIS 528



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 227/448 (50%), Gaps = 15/448 (3%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK     + + +FD+  ++  V +  ++  Y +      +L LF  +R   +      
Sbjct: 195 FYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYV 254

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           +SSVL  C  L     G+Q+H   ++ G   DV+V   L+D Y + N V+ GR++FD M 
Sbjct: 255 VSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV 314

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             N++SWT+++SGY +N  +   ++LF  M   G KP+ F  ++VL        +    Q
Sbjct: 315 VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 374

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH   IK   E    V N LI MY KS ++ DA+ VFD M +++ I++N+M+ GY + E 
Sbjct: 375 VHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEK 434

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA E F+ M +   +    TF ++I   +    LR  +Q H+Q++K G+DF   +   
Sbjct: 435 LSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNA 494

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG +E+A K+F+     +DVV W +MIS H Q+G  + A+  F +M +EG++P
Sbjct: 495 LVDMYAKCGSIEEARKMFN-SSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP 553

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           N  T+  +L+A       +V   +   N    F +     +      +L  + K+FE  +
Sbjct: 554 NYVTFVAVLSACSHAG--RVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKE 611

Query: 441 -------EKDIVAWSAMLAGYAQIGDTE 461
                  E   + W ++L+     G+ E
Sbjct: 612 FIEKMPIEPAAIVWRSLLSACRIAGNVE 639


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/658 (35%), Positives = 370/658 (56%), Gaps = 57/658 (8%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H  +  +     + V   LIS     K +  A ++F   +  +   +N+++ G   N 
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
               +   F  M        R T   V+K  A   ++ L R LH  V+K G++FD  +R 
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177

Query: 320 GLMVAYSKCGKMEDASKIF---SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
            L+  Y K G++    ++F       + + ++ W  +I+G  + G +  A + F  M   
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMP-- 235

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
                                            E++     +L+N +V+ G LD A ++F
Sbjct: 236 ---------------------------------ERNAGSWNSLINGFVRNGDLDRARELF 262

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             + EK++V+W+ M+ G++Q GD E A+ ++ ++  EGV+PN+ T  S + ACT    A+
Sbjct: 263 VQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTK-IGAL 321

Query: 497 EQGKQFH--ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           + G++ H    S   +LN    + +ALV MY+K GNI+SAS VF   + +DL++W+ MI 
Sbjct: 322 QVGERIHNYLSSNGFQLNRG--IGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIW 379

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           G+A HG   +AL+ F +M+   +  D + F+ ++TAC+H+G VD+G  +F+ M  ++ I 
Sbjct: 380 GWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIE 439

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
           PTM+HY+ +VDL  RAG L++A+  I  MP      +W  +  ACR              
Sbjct: 440 PTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEK 499

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L+ L+P     YV LSN+YAA G W++  RVR LM +R V+K+ G+S+IEV+ + +SF+A
Sbjct: 500 LLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVA 559

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           GD +H ++ +I  KLEE++   K  GY P+T++VL +I++E KE  L  HSE+LA+AFGL
Sbjct: 560 GDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGL 619

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++T  G+ ++IVKNLRVCGDCH+++K  SKL RR+I++RD  RFHHFK+G CSCGDYW
Sbjct: 620 ISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 23/268 (8%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+     SL++ ++R  +++  R +F  M E NVVSWT++++G+++N  +++ L +F RM
Sbjct: 237 RNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRM 296

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             EG++PN  T  + L      G +    ++H  +  NG ++   +  AL+ MY K   +
Sbjct: 297 LEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNI 356

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           + A  VF   + +D +TW+ M+ G+  +    +A + F  M  AG       F++++  C
Sbjct: 357 KSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTAC 416

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIR------------TGLMVAYSKCGKMEDASKIF 338
           +           HS  +  G++F  ++R            T ++    + G++++A    
Sbjct: 417 S-----------HSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFI 465

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLA 366
             M    D V W A+      +  I++A
Sbjct: 466 QSMPINPDFVIWGALFCACRAHKNIEMA 493



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 183/473 (38%), Gaps = 74/473 (15%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H +        +  V T L+       +++    +F   +  N+  + +L+ G A N 
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
             +  +  F  M    I+P+  T   VL  +A    V     +H  V+K G E  + V  
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRV 177

Query: 219 ALISMYLKSKM-----------------------------------VRDARAVFDGMEDR 243
           +L+ MY+K                                      +  A ++F+ M +R
Sbjct: 178 SLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPER 237

Query: 244 DSITWNSMVAGYVTN-------EL------------------------HMEAFETFNNMG 272
           ++ +WNS++ G+V N       EL                        H +A   F  M 
Sbjct: 238 NAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRML 297

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G      T VS +  C     L++  ++H+ +  NG   +  I T L+  Y+KCG ++
Sbjct: 298 EEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIK 357

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            AS++F +  + KD+++W+ MI G   +G  D A+  F +M   G+ P+   +  ILTA 
Sbjct: 358 SASRVF-VETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTAC 416

Query: 393 PAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVA 446
                     +  ++     + E +    T +++   + G LDEA    + +    D V 
Sbjct: 417 SHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVI 476

Query: 447 WSAMLAGYAQIGDTEGA-VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           W A+        + E A +   + L  E   P  + F S + A       VE+
Sbjct: 477 WGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVER 529



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 87/166 (52%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + LF + P++N V +  ++  + ++  H++AL++F  +   G+     T+ S L  C 
Sbjct: 257 RARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACT 316

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            +     G ++H     +GF  +  + T+LVD+Y +  N++   RVF +    ++++W+ 
Sbjct: 317 KIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSV 376

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           ++ G+A +   D+ L+ F +M+  GI P+   F  +L   +  G V
Sbjct: 377 MIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNV 422


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 249/692 (35%), Positives = 372/692 (53%), Gaps = 28/692 (4%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K CG L +      VH      GF  D+   ++L+ LY     + D RRVFD++
Sbjct: 114 TFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDEL 173

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              + + W  +L GY ++   D  +  F  M+      NS T++ +L + A  G      
Sbjct: 174 PLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGT 233

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H +VI +G E    V N L++MY K   +  AR +F+ M   D++TWN ++AGYV N 
Sbjct: 234 QLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNG 293

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   FN M  AG +    TF S +     +  LR  +++HS ++++ + FD  +++
Sbjct: 294 FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKS 353

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y K G +E A KIF     + DV   TAMISG++ +G    A+N F  + +EG+ 
Sbjct: 354 ALIDVYFKGGDVEMARKIFQQ-NILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMV 412

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            N  T + +L A  AV+      ++H HI+K   E   +VG+A+ + Y K G LD A + 
Sbjct: 413 TNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEF 472

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS-- 493
           F  + ++D V W++M++ ++Q G  E A+ ++RQ+   G K     F SV  +    +  
Sbjct: 473 FRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAK-----FDSVSLSSALSAAA 527

Query: 494 --AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
              A+  GK+ H   I+   ++   V+S L+ MYSK GN+  A  VF     ++ VSWNS
Sbjct: 528 NLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNS 587

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +I  Y  HG  ++ L+++ EM R  +  D +TF+ +I+AC HAGLVDEG  YF  M  E+
Sbjct: 588 IIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREY 647

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----------- 660
            I   MEHY+CMVDLY RAG + +A D I  MPF   A VW T+L ACR           
Sbjct: 648 GIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLA 707

Query: 661 ---LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS 717
              L+ L P +S  YVLLSN++A  G W    +VR LM ++ V+K  GYSWI+V   T+ 
Sbjct: 708 SRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHM 767

Query: 718 FLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
           F A D +HP+S +IY  L+ L   L+  GY P
Sbjct: 768 FSAADGNHPESVEIYLILKSLLLELRKQGYVP 799



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/565 (29%), Positives = 279/565 (49%), Gaps = 8/565 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQVH + +  G       S+ ++ LY+      D   +F ++     + W  ++ G    
Sbjct: 31  RQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYML 90

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              D  L  + +M    + P+ +TF  V+        V   + VH      G  V     
Sbjct: 91  GWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAG 150

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           +ALI +Y  +  +RDAR VFD +  RD+I WN M+ GYV +     A  TF  M  + + 
Sbjct: 151 SALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSM 210

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T+  ++ +CAT        QLH  V+ +G +FD  +   L+  YSKCG +  A K+
Sbjct: 211 VNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKL 270

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ M +  D V+W  +I+G++QNG  D A   F  M   GV+P+  T++  L +      
Sbjct: 271 FNTMPQ-TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGS 329

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                +VH++I++        + +AL++ Y K G ++ A K+F+     D+   +AM++G
Sbjct: 330 LRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISG 389

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y   G    A+  +R L  EG+  N  T +SV+ AC A  AA++ GK+ H   +K +L N
Sbjct: 390 YVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAA-VAALKPGKELHCHILKKRLEN 448

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V SA+  MY+K G ++ A E F+R   RD V WNSMI  ++Q+G  + A+++F++M 
Sbjct: 449 IVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMG 508

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
               +FD ++    ++A  +   +  G++    ++       T    S ++D+YS+ G L
Sbjct: 509 MSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVA-STLIDMYSKCGNL 567

Query: 634 EKAMDIINRMPFAASATVWRTVLAA 658
             A  + N M    +   W +++AA
Sbjct: 568 ALAWCVFNLMD-GKNEVSWNSIIAA 591



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 151/564 (26%), Positives = 277/564 (49%), Gaps = 20/564 (3%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y +  + +FD  P R+ + +N +L  Y +      A+  F  +R     +   T + +L 
Sbjct: 162 YIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILS 221

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C    +   G Q+H   + SGF  D  V+ +LV +Y +  N+   R++F+ M +++ V+
Sbjct: 222 ICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVT 281

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W  L++GY +N   D    LF+ M   G+KP+S TF++ L  + + G +    +VH+ ++
Sbjct: 282 WNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIV 341

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           ++       + +ALI +Y K   V  AR +F      D     +M++GYV + L+++A  
Sbjct: 342 RHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAIN 401

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
           TF  +   G      T  SV+  CA    L+  ++LH  +LK  ++   N+ + +   Y+
Sbjct: 402 TFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYA 461

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG+++ A + F  M + +D V W +MIS   QNG  ++A++ F QM   G + +  + S
Sbjct: 462 KCGRLDLAYEFFRRMSD-RDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLS 520

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
             L+A   +       ++H ++I+  +     V + L++ Y K G L  A  VF L+D K
Sbjct: 521 SALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGK 580

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           + V+W++++A Y   G     + +Y ++   G+ P+  TF  +I+AC   +  V++G  +
Sbjct: 581 NEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISAC-GHAGLVDEGIHY 639

Query: 503 HAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGY 556
             C      I A++ +  C    +V +Y + G +  A +  K      D   W +++   
Sbjct: 640 FHCMTREYGIGARMEHYAC----MVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGAC 695

Query: 557 AQHGHTKKALEVFKEMRRQDLEFD 580
             HG+    +E+ K   R  LE D
Sbjct: 696 RLHGN----VELAKLASRHLLELD 715


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/799 (33%), Positives = 419/799 (52%), Gaps = 41/799 (5%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVF 136
           S L   +K+   L D    R +H   ++ G     +  V+ +L+  Y R   +     VF
Sbjct: 58  SALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVF 117

Query: 137 DDMNES--NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
             +++S  + VS+ SL+S     +  D  L     M   G    SFT  +VL  ++    
Sbjct: 118 GSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPA 177

Query: 195 VATAVQV----HTMVIKNG---GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR--DS 245
            A AV++    H   +KNG   G    +  NAL+SMY +  +V DA+ +F G      D 
Sbjct: 178 AAAAVRLGREAHAFALKNGLLHGHQRFAF-NALLSMYARLGLVADAQRLFAGATPGRGDV 236

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           +TWN+MV+  V + +  EA +T  +M   G      TF S +  C+  + L + R++H+ 
Sbjct: 237 VTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAY 296

Query: 306 VLKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHLQNGAI 363
           V+K+  +  +  + + L+  Y+   ++  A ++F M+ +  K +  W AMI G+ Q G  
Sbjct: 297 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 356

Query: 364 DLAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTA 418
           + A+  F +M  E G  P   T + +L A      F     VH +++K     +  V  A
Sbjct: 357 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNA 416

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR---QLTSEGV 475
           L++ Y + G  D A ++F ++D  D+V+W+ ++ G    G    A ++ R   QL   GV
Sbjct: 417 LMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 476

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
            PN  T  +++  C A  AA  +GK+ H  +++  L+  + V SALV MY+K G +  + 
Sbjct: 477 VPNAITLMTLLPGC-AILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSR 535

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHA 594
            VF R  +R+ ++WN +I  Y  HG   +A  +F  M    +   + +TF+  + AC+H+
Sbjct: 536 AVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHS 595

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA-ASATVWR 653
           G+VD G Q F  M  +H + PT +  +C+VD+  RAG L++A  ++  M       + W 
Sbjct: 596 GMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWS 655

Query: 654 TVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           T+L ACRL              + L+P +++ YVLL N+Y+A G W   A VR  M  R 
Sbjct: 656 TMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRG 715

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           V KE G SWIEV    + F+AG+ +HP S ++++ +E L   +   GY PDTS VL D+D
Sbjct: 716 VAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMD 775

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           D  K A+L  HSE+LAIAFGL+    GA +++ KNLRVC DCH   K +SK+  R+IV+R
Sbjct: 776 DGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLR 835

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D  RFHHF+ G CSCGDYW
Sbjct: 836 DVRRFHHFRNGQCSCGDYW 854



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 205/456 (44%), Gaps = 28/456 (6%)

Query: 32  QSLF-DRSPQR-NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           Q LF   +P R + V +N ++    +  +  EA+     +  LG+   G T +S L  C 
Sbjct: 223 QRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACS 282

Query: 90  CLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVS 146
            L     GR++H   +K    A +  V+++LVD+Y     V   R+VFD + +S   +  
Sbjct: 283 RLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGM 342

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W +++ GYA+  M++  L LF RM+ E G  P   T ++VL   A     A    VH  V
Sbjct: 343 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 402

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K G      V NAL+ MY +      AR +F  ++  D ++WN+++ G V      +AF
Sbjct: 403 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 462

Query: 266 ETFNNMGL---AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +    M      G      T ++++  CA        +++H   +++ +D D  + + L+
Sbjct: 463 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALV 522

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPN 381
             Y+KCG +  +  +F  +   ++ ++W  +I  +  +G    A   F +MT  G  RPN
Sbjct: 523 DMYAKCGCLALSRAVFDRLPR-RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 581

Query: 382 GFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             T+   L A              HA       E +  +   +++   + G LDEA  + 
Sbjct: 582 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 641

Query: 437 ELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
             ++  E+ + AWS ML          GA +++R +
Sbjct: 642 TSMEAGEQQVSAWSTML----------GACRLHRNV 667


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/707 (33%), Positives = 397/707 (56%), Gaps = 40/707 (5%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
           S   +  +MR   V D  R+F  M   +  ++ ++L+GY+ N        LF  +     
Sbjct: 41  SNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP---- 96

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           +P++++++T+L  LA    +A A  +   M +++     +   N +IS +    +V  AR
Sbjct: 97  RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRD-----SVTYNVMISSHANHGLVSLAR 151

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
             FD   ++D+++WN M+A YV N    EA   FN+      E    ++ +++       
Sbjct: 152 HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR----TEWDVISWNALMSGYVQWG 207

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVA-YSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           ++  AR+L  ++    +     +   +MV+ Y++ G M +A ++F     ++DV +WTA+
Sbjct: 208 KMSEARELFDRMPGRDV-----VSWNIMVSGYARRGDMVEARRLFDAA-PVRDVFTWTAV 261

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF 413
           +SG+ QNG ++ A   F  M       N  +++ ++ A            +      ++ 
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNV 317

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           +    +L  Y + G+L+EA  VF+ + +KD V+W+AMLA Y+Q G +E  ++++ ++   
Sbjct: 318 ASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRC 377

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G   N   F+ V++ C A  AA+E G Q H   I+A       V +AL+ MY K GN+E 
Sbjct: 378 GEWVNRSAFACVLSTC-ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMED 436

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
           A   F+   +RD+VSWN+MI GYA+HG  K+ALE+F  MR    + D IT +GV+ AC+H
Sbjct: 437 ARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH 496

Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
           +GLV++G  YF  M ++  +    EHY+CM+DL  RAG L +A D++  MPF   +T+W 
Sbjct: 497 SGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWG 556

Query: 654 TVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
            +L A R+                L+P ++ +YVLLSN+YA++G W++  ++R +M +R 
Sbjct: 557 ALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERG 616

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           VKK  G+SWIEV+NK ++F AGD  HP+  +IY+ LE+L  R+K AGY   T  VL D++
Sbjct: 617 VKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVE 676

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           +E KE +L  HSE+LA+A+G++  P G P++++KNLRVCGDCH   K
Sbjct: 677 EEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCHNAFK 723



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 244/538 (45%), Gaps = 52/538 (9%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-----LGLPLFGSTLSSVLK 86
           + LF   P+R+   YN +L  Y  +     A +LF  I R         L    +SS L 
Sbjct: 58  ERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLA 117

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               LFD +               RD      ++  +     V   R  FD   E + VS
Sbjct: 118 DARGLFDEMP-------------VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVS 164

Query: 147 WTSLLSGYARNKMNDRVLELFH-RMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W  +L+ Y RN   +    LF+ R + + I  N+     V       G ++ A ++   +
Sbjct: 165 WNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYV-----QWGKMSEARELFDRM 219

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
              G +VV+   N ++S Y +   + +AR +FD    RD  TW ++V+GY  N +  EA 
Sbjct: 220 --PGRDVVS--WNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEAR 275

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F+ M     E    ++ +++      + +  A++L + +    +   + + TG    Y
Sbjct: 276 RVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTG----Y 327

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           ++ G +E+A  +F  M + KD VSW AM++ + Q G  +  +  F +M R G   N   +
Sbjct: 328 AQAGMLEEAKAVFDTMPQ-KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAF 386

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
           + +L+    ++      Q+H  +I+  Y     VG ALL  Y K G +++A   FE ++E
Sbjct: 387 ACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEE 446

Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
           +D+V+W+ M+AGYA+ G  + A++I+  + +   KP++ T   V+ AC+  S  VE+G  
Sbjct: 447 RDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSH-SGLVEKGIS 505

Query: 502 F-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
           +     H   + AK  +  C    ++ +  + G +  A ++ K    + D   W +++
Sbjct: 506 YFYSMHHDFGVTAKPEHYTC----MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL 559



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 137/288 (47%), Gaps = 9/288 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ +++FD  PQ++ V +  +L  Y +    +E L LF+ + R G  +  S  + VL TC
Sbjct: 334 EEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTC 393

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             +     G Q+H   +++G+     V  +L+ +Y +  N+ED R  F++M E +VVSW 
Sbjct: 394 ADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWN 453

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           ++++GYAR+      LE+F  M+    KP+  T   VL   +  G+V   +   ++M   
Sbjct: 454 TMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHD 513

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG---YVTNELHME 263
            G          +I +  ++  + +A  +   M  + DS  W +++     +   EL   
Sbjct: 514 FGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRS 573

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           A E    +    A +    +V +  + A++ + R AR++   + + G+
Sbjct: 574 AAEKIFELEPENAGM----YVLLSNIYASSGKWRDARKMRVMMEERGV 617



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 155/354 (43%), Gaps = 48/354 (13%)

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV-------------- 378
           DAS   S  R   +V+     I+ H++ G +  A   F  M R                 
Sbjct: 24  DASSSSSSGRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG 83

Query: 379 -------------RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
                        RP+ ++Y+ +L A    S       +      +       +++++  
Sbjct: 84  RLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHAN 143

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G++  A   F+L  EKD V+W+ MLA Y + G  E A  ++          N  T   V
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF----------NSRTEWDV 193

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQRKR 544
           I+     S  V+ GK   A  +  ++     VS + +V+ Y+++G++  A  +F     R
Sbjct: 194 ISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR 253

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D+ +W +++ GYAQ+G  ++A  VF  M     E + +++  ++ A     ++DE ++ F
Sbjct: 254 DVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKELF 309

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           ++M   +     +  ++ M+  Y++AGMLE+A  + + MP    A  W  +LAA
Sbjct: 310 NMMPCRN-----VASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/751 (34%), Positives = 401/751 (53%), Gaps = 59/751 (7%)

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP-NSFTFSTVL----GVLADEGIVAT 197
           + VS+ SL+S     +  +R L+    M  EG    +SFT  +VL     +  D+G    
Sbjct: 132 DAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDG-RRL 190

Query: 198 AVQVHTMVIKNG----GEVVTSVCNALISMYLKSKMVRDARAVFDGME------DRDSIT 247
             + H   +K G    G       NAL+SMY +  +V DA+++F            D +T
Sbjct: 191 GREAHAFALKRGFLDEGRERFPF-NALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVT 249

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WN+M++  V      EA E   +M   G      TF S +  C+  + L L R++H+ VL
Sbjct: 250 WNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVL 309

Query: 308 KNGIDFDHN--IRTGLMVAYSKCGKMEDASKIFSMMRE-MKDVVSWTAMISGHLQNGAID 364
           K+  D   N  + + L+  Y+   K+  A ++F M+ E  + +  W AMI G+ Q G  +
Sbjct: 310 KDA-DLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDE 368

Query: 365 LAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTAL 419
            A+  F +M  E G  P+  T S +L A      F     +H +++K     +  V  AL
Sbjct: 369 EALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNAL 428

Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL--------- 470
           ++ Y + G +D A ++F +ID +D+V+W+ ++ G    G    A ++  ++         
Sbjct: 429 MDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSS 488

Query: 471 ---TSEG----VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
              T EG      PN  T  +++  C A  AA  +GK+ H  +++  L + + V SALV 
Sbjct: 489 SSTTEEGEAHRCMPNNITLMTLLPGCAA-LAAPARGKEIHGYAVRHALESDIAVGSALVD 547

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGI 582
           MY+K G + ++  VF R  +R++++WN +I  Y  HG   +A+ +F EM    +   + +
Sbjct: 548 MYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEV 607

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           TFI  + AC+H+GLVD G + F  M  +H + PT + ++C+VD+  RAG L++A  II  
Sbjct: 608 TFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITS 667

Query: 643 M-PFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQE 687
           M P     + W ++L ACRL                L+P +++ YVLL N+Y+A G W +
Sbjct: 668 MEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDK 727

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
              VR  M  + V KE G SWIE+    + F+AG+ SHP S ++++ ++ L  R++  GY
Sbjct: 728 SVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGY 787

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            PDTS VL D+D++ K A+L  HSE+LAIAFGL+  P GA +++ KNLRVC DCH   K 
Sbjct: 788 APDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKF 847

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +SK+  RDIV+RD  RFHHF++G CSCGDYW
Sbjct: 848 MSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 208/464 (44%), Gaps = 53/464 (11%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +N ++    +     EA+ +   +  LG+   G T +S L  C  L     GR++H
Sbjct: 246 DVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMH 305

Query: 102 CECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVSWTSLLSGYARNK 158
              +K    A +  V+++LVD+Y     V   RRVFD + E +  +  W +++ GYA+  
Sbjct: 306 AVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAG 365

Query: 159 MNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
           M++  LELF RM+ E G  P+  T S VL   A     A    +H  V+K G      V 
Sbjct: 366 MDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQ 425

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG-- 275
           NAL+ MY +   +  AR +F  ++ RD ++WN+++ G V      EAF+    M L    
Sbjct: 426 NALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPS 485

Query: 276 ---------AELTRS-----TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
                     E  R      T ++++  CA        +++H   +++ ++ D  + + L
Sbjct: 486 PSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSAL 545

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRP 380
           +  Y+KCG +  +  +F  +   ++V++W  +I  +  +G  D AV  F +M   G   P
Sbjct: 546 VDMYAKCGCLAASRAVFDRLPR-RNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATP 604

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYE------------KSFSVGTALLNAYVKKGI 428
           N  T+   L A         H+ ++    E             +  +   +++   + G 
Sbjct: 605 NEVTFIAALAACS-------HSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGR 657

Query: 429 LDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           LDEA  +   ++  E+ + AWS++L          GA +++R +
Sbjct: 658 LDEAYSIITSMEPGEQQVSAWSSLL----------GACRLHRNV 691



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 155/338 (45%), Gaps = 22/338 (6%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           P R    +N ++  Y +  + +EAL LF  +    G     +T+S VL  C         
Sbjct: 347 PSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGK 406

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
             +H   VK G A +  V  +L+D+Y R   ++  RR+F  ++  +VVSW +L++G    
Sbjct: 407 EAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQ 466

Query: 158 KMNDRVLELFHRMQV------------EG----IKPNSFTFSTVLGVLADEGIVATAVQV 201
                  +L   MQ+            EG      PN+ T  T+L   A     A   ++
Sbjct: 467 GHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEI 526

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H   +++  E   +V +AL+ MY K   +  +RAVFD +  R+ ITWN ++  Y  + L 
Sbjct: 527 HGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLG 586

Query: 262 MEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIR 318
            EA   F+ M  AG E T +  TF++ +  C+ +  +    +L H     +G+    ++ 
Sbjct: 587 DEAVALFDEMA-AGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLH 645

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVS-WTAMIS 355
             ++    + G++++A  I + M   +  VS W++++ 
Sbjct: 646 ACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLG 683


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/799 (33%), Positives = 419/799 (52%), Gaps = 41/799 (5%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVF 136
           S L   +K+   L D    R +H   ++ G     +  V+ +L+  Y R   +     VF
Sbjct: 58  SALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVF 117

Query: 137 DDMNES--NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
             +++S  + VS+ SL+S     +  D  L     M   G    SFT  +VL  ++    
Sbjct: 118 GSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPA 177

Query: 195 VATAVQV----HTMVIKNG---GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR--DS 245
            A AV++    H   +KNG   G    +  NAL+SMY +  +V DA+ +F G      D 
Sbjct: 178 AAAAVRLGREAHAFALKNGLLHGHQRFAF-NALLSMYARLGLVADAQRLFAGATPGRGDV 236

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           +TWN+MV+  V + +  EA +T  +M   G      TF S +  C+  + L + R++H+ 
Sbjct: 237 VTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAY 296

Query: 306 VLKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHLQNGAI 363
           V+K+  +  +  + + L+  Y+   ++  A ++F M+ +  K +  W AMI G+ Q G  
Sbjct: 297 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 356

Query: 364 DLAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTA 418
           + A+  F +M  E G  P   T + +L A      F     VH +++K     +  V  A
Sbjct: 357 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNA 416

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR---QLTSEGV 475
           L++ Y + G  D A ++F ++D  D+V+W+ ++ G    G    A ++ R   QL   GV
Sbjct: 417 LMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 476

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
            PN  T  +++  C A  AA  +GK+ H  +++  L+  + V SALV MY+K G +  + 
Sbjct: 477 VPNAITLMTLLPGC-AILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSR 535

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHA 594
            VF R  +R+ ++WN +I  Y  HG   +A  +F  M    +   + +TF+  + AC+H+
Sbjct: 536 AVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHS 595

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA-ASATVWR 653
           G+VD G Q F  M  +H + PT +  +C+VD+  RAG L++A  ++  M       + W 
Sbjct: 596 GMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWS 655

Query: 654 TVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           T+L ACRL              + L+P +++ YVLL N+Y+A G W   A VR  M  R 
Sbjct: 656 TMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRG 715

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           V KE G SWIEV    + F+AG+ +HP S ++++ +E L   +   GY PDTS VL D+D
Sbjct: 716 VAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMD 775

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           D  K A+L  HSE+LAIAFGL+    GA +++ KNLRVC DCH   K +SK+  R+IV+R
Sbjct: 776 DGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLR 835

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D  RFHHF+ G CSCGDYW
Sbjct: 836 DVRRFHHFRNGQCSCGDYW 854



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 205/456 (44%), Gaps = 28/456 (6%)

Query: 32  QSLF-DRSPQR-NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           Q LF   +P R + V +N ++    +  +  EA+     +  LG+   G T +S L  C 
Sbjct: 223 QRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACS 282

Query: 90  CLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVS 146
            L     GR++H   +K    A +  V+++LVD+Y     V   R+VFD + +S   +  
Sbjct: 283 RLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGM 342

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W +++ GYA+  M++  L LF RM+ E G  P   T ++VL   A     A    VH  V
Sbjct: 343 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 402

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K G      V NAL+ MY +      AR +F  ++  D ++WN+++ G V      +AF
Sbjct: 403 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 462

Query: 266 ETFNNMGL---AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +    M      G      T ++++  CA        +++H   +++ +D D  + + L+
Sbjct: 463 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALV 522

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPN 381
             Y+KCG +  +  +F  +   ++ ++W  +I  +  +G    A   F +MT  G  RPN
Sbjct: 523 DMYAKCGCLALSRAVFDRLPR-RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 581

Query: 382 GFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             T+   L A              HA       E +  +   +++   + G LDEA  + 
Sbjct: 582 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 641

Query: 437 ELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
             ++  E+ + AWS ML          GA +++R +
Sbjct: 642 TSMETGEQQVSAWSTML----------GACRLHRNV 667


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/671 (33%), Positives = 379/671 (56%), Gaps = 21/671 (3%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN 160
           HC  +KSG    +  + +++  Y +   +    ++F + ++ + VSW ++++G+      
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           +  LE    M+  G   + ++F ++L  +A  G V    QVH+M++K G E      +AL
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           + MY K + V DA  VF  +  R+S+TWN++++GY        AF   + M L G E+  
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
            TF  ++ L       +L  Q+H++++K+G+  D  +   ++ AYS+CG +EDA ++F  
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS---- 396
             E +D+V+W +M++ +L N   + A   F +M   G  P+ +TY+ +++A    S    
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQ 321

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVK--KGILDEAAKVFELIDEKDIVAWSAMLAGY 454
              +H  +IK   E    +  +L+  Y+K     +DEA  +FE ++ KD V+W+++L G+
Sbjct: 322 GKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGF 381

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +Q G +E A+K +  + S+ V  + + FS+V+ +C+   A ++ G+Q H   +K+     
Sbjct: 382 SQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCS-DLATLQLGQQVHVLVLKSGFEPN 440

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             V+S+L+ MYSK G IE A + F    K   ++WNS+I GYAQHG  K AL++F  M+ 
Sbjct: 441 GFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 500

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           + ++ D ITF+ V+TAC+H GLV+EG  +   M +++ I P MEHY+CM+DL  RAG L+
Sbjct: 501 RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLD 560

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A  +I  MPF   A VW+T+L ACR              L+ L+P +   YVLLS+M+ 
Sbjct: 561 EAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFG 620

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
               W E+A +++LM +R VKK  G+SWIEVKN+  SF A D SHP   +IY +L EL  
Sbjct: 621 HLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELME 680

Query: 741 RLKDAGYKPDT 751
            ++   Y  ++
Sbjct: 681 EIRRLDYVANS 691



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 253/476 (53%), Gaps = 9/476 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F  + QR+ V +N ++  +      + AL     ++R G  + G +  S+LK   C+  
Sbjct: 56  MFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGY 115

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+QVH   VK G+  +V   ++L+D+Y +   VED   VF  +N  N V+W +L+SG
Sbjct: 116 VEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISG 175

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+         L   M++EG++ +  TF+ +L +L D  +     QVH  ++K+G    
Sbjct: 176 YAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASD 235

Query: 214 TSVCNALISMYLKSKMVRDARAVFDG-MEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
           T+VCNA+I+ Y +   + DA  VFDG +E RD +TWNSM+A Y+ N    EAF+ F  M 
Sbjct: 236 TTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQ 295

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY--SKCGK 330
           + G E    T+ SVI            + LH  V+K G++F   I   L+  Y  S    
Sbjct: 296 VLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKS 355

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           M++A  IF  + E KD VSW ++++G  Q+G  + A+ FF  M  + V  + + +S +L 
Sbjct: 356 MDEALNIFESL-ENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLR 414

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +   ++      QVH  ++K+ +E +  V ++L+  Y K G++++A K F+   +   +A
Sbjct: 415 SCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIA 474

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           W++++ GYAQ G  + A+ ++  +    VK +  TF +V+ AC+     VE+G  F
Sbjct: 475 WNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHI-GLVEEGWSF 529



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 8/253 (3%)

Query: 3   LSPALKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEA 62
           L P   SLI    K   KS+          ++F+    ++ V +N +L  + +  L ++A
Sbjct: 337 LVPISNSLIAMYLKSHSKSMDEAL------NIFESLENKDHVSWNSILTGFSQSGLSEDA 390

Query: 63  LNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDL 122
           L  F  +R   + +     S+VL++C  L     G+QVH   +KSGF  +  V++SL+ +
Sbjct: 391 LKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFM 450

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           Y +   +ED R+ FD   + + ++W SL+ GYA++      L+LF  M+   +K +  TF
Sbjct: 451 YSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITF 510

Query: 183 STVLGVLADEGIVATAVQ-VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             VL   +  G+V      + +M    G          +I +  ++  + +A+A+ + M 
Sbjct: 511 VAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP 570

Query: 242 -DRDSITWNSMVA 253
            + D++ W +++ 
Sbjct: 571 FEPDAMVWKTLLG 583


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/799 (33%), Positives = 419/799 (52%), Gaps = 41/799 (5%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVF 136
           S L   +K+   L D    R +H   ++ G     +  V+ +L+  Y R   +     VF
Sbjct: 60  SALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVF 119

Query: 137 DDMNES--NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
             +++S  + VS+ SL+S     +  D  L     M   G    SFT  +VL  ++    
Sbjct: 120 GSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPA 179

Query: 195 VATAVQV----HTMVIKNG---GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR--DS 245
            A AV++    H   +KNG   G    +  NAL+SMY +  +V DA+ +F G      D 
Sbjct: 180 AAAAVRLGREAHAFALKNGLLHGHQRFAF-NALLSMYARLGLVADAQRLFAGATPGRGDV 238

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           +TWN+MV+  V + +  EA +T  +M   G      TF S +  C+  + L + R++H+ 
Sbjct: 239 VTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAY 298

Query: 306 VLKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHLQNGAI 363
           V+K+  +  +  + + L+  Y+   ++  A ++F M+ +  K +  W AMI G+ Q G  
Sbjct: 299 VIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMD 358

Query: 364 DLAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTA 418
           + A+  F +M  E G  P   T + +L A      F     VH +++K     +  V  A
Sbjct: 359 EEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNA 418

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR---QLTSEGV 475
           L++ Y + G  D A ++F ++D  D+V+W+ ++ G    G    A ++ R   QL   GV
Sbjct: 419 LMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGV 478

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
            PN  T  +++  C A  AA  +GK+ H  +++  L+  + V SALV MY+K G +  + 
Sbjct: 479 VPNAITLMTLLPGC-AILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSR 537

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHA 594
            VF R  +R+ ++WN +I  Y  HG   +A  +F  M    +   + +TF+  + AC+H+
Sbjct: 538 AVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHS 597

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA-ASATVWR 653
           G+VD G Q F  M  +H + PT +  +C+VD+  RAG L++A  ++  M       + W 
Sbjct: 598 GMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWS 657

Query: 654 TVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
           T+L ACRL              + L+P +++ YVLL N+Y+A G W   A VR  M  R 
Sbjct: 658 TMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRG 717

Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
           V KE G SWIEV    + F+AG+ +HP S ++++ +E L   +   GY PDTS VL D+D
Sbjct: 718 VAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMD 777

Query: 760 DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVR 819
           D  K A+L  HSE+LAIAFGL+    GA +++ KNLRVC DCH   K +SK+  R+IV+R
Sbjct: 778 DGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLR 837

Query: 820 DTNRFHHFKEGLCSCGDYW 838
           D  RFHHF+ G CSCGDYW
Sbjct: 838 DVRRFHHFRNGQCSCGDYW 856



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 205/456 (44%), Gaps = 28/456 (6%)

Query: 32  QSLF-DRSPQR-NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           Q LF   +P R + V +N ++    +  +  EA+     +  LG+   G T +S L  C 
Sbjct: 225 QRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACS 284

Query: 90  CLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVS 146
            L     GR++H   +K    A +  V+++LVD+Y     V   R+VFD + +S   +  
Sbjct: 285 RLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGM 344

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W +++ GYA+  M++  L LF RM+ E G  P   T ++VL   A     A    VH  V
Sbjct: 345 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 404

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K G      V NAL+ MY +      AR +F  ++  D ++WN+++ G V      +AF
Sbjct: 405 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 464

Query: 266 ETFNNMGL---AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +    M      G      T ++++  CA        +++H   +++ +D D  + + L+
Sbjct: 465 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALV 524

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPN 381
             Y+KCG +  +  +F  +   ++ ++W  +I  +  +G    A   F +MT  G  RPN
Sbjct: 525 DMYAKCGCLALSRAVFDRLPR-RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 583

Query: 382 GFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             T+   L A              HA       E +  +   +++   + G LDEA  + 
Sbjct: 584 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 643

Query: 437 ELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
             ++  E+ + AWS ML          GA +++R +
Sbjct: 644 TSMETGEQQVSAWSTML----------GACRLHRNV 669


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 260/757 (34%), Positives = 412/757 (54%), Gaps = 104/757 (13%)

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           +F+     NV  +TS+L  Y+  + + +V+ +F  MQ  G++P++F +  ++    + GI
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGI 115

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMV 252
                  H  V+K G      V NA+I MY +   +  AR VFD + D  R    WN+MV
Sbjct: 116 -----GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           +GY   E   +A   F+ M                                    +N I 
Sbjct: 171 SGYWKWESEGQAQWLFDVMPE----------------------------------RNVIT 196

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
           +     T ++  Y+K   +E A + F  M E + VVSW AM+SG+ QNG  +  +  F +
Sbjct: 197 W-----TAMVTGYAKVKDLEAARRYFDCMPE-RSVVSWNAMLSGYAQNGLAEEVLRLFDE 250

Query: 373 MTREGVRPNGFTYSIILTA-----QPAVSPFQV---HAHIIKTN----------YEKSFS 414
           M   G+ P+  T+  +++A      P ++   V   H   I+ N          Y K  S
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGS 310

Query: 415 VGTA------------------LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
           +G A                  +++AY + G LD A ++F  +  +++V W++M+AGYAQ
Sbjct: 311 IGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQ 370

Query: 457 IGDTEGAVKIYRQL-TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
            G +  A+++++++ T++ + P+E T  SVI+AC     A+E G        + ++  ++
Sbjct: 371 NGQSAMAIELFKEMITAKKLTPDEVTMVSVISAC-GHLGALELGNWVVRFLTENQIKLSI 429

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
              +A++ MYS+ G++E A  VF+    RD+VS+N++I G+A HGH  +A+ +   M+  
Sbjct: 430 SGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG 489

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
            +E D +TFIGV+TAC+HAGL++EG++ F+ + +     P ++HY+CMVDL  R G LE 
Sbjct: 490 GIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELED 544

Query: 636 AMDIINRMPFAASATVWRTVL--------------AACRLISLQPHDSAIYVLLSNMYAA 681
           A   + RMP    A V+ ++L              AA +L  L+P +S  ++LLSN+YA+
Sbjct: 545 AKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYAS 604

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
            G W++  R+R+ M    VKK  G+SW+E   K + F+  D SH +S+ IY  L EL  +
Sbjct: 605 AGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKK 664

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +++AGY  D S VL+D+++E KE I+  HSE+LAI + L+ + AGA +++VKNLRVC DC
Sbjct: 665 MREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDC 724

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           HT IK+ISKLE R I+VRD NRFH F +GLCSC DYW
Sbjct: 725 HTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/412 (29%), Positives = 190/412 (46%), Gaps = 70/412 (16%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V   T++V  Y +  ++E  RR FD M E +VVSW ++LSGYA+N + + VL LF  M
Sbjct: 192 RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEM 251

Query: 171 QVEGIKPNSFTFSTVLGVLADEG---IVATAVQ-VHTMVIKNGGEVVTSVC--------- 217
              GI+P+  T+ TV+   +  G   + A+ V+ +H   I+    V T++          
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSI 311

Query: 218 -------------------NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
                              NA+IS Y +   +  AR +F+ M  R+ +TWNSM+AGY  N
Sbjct: 312 GAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQN 371

Query: 259 ELHMEAFETFNNMGLAGAELT--RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
                A E F  M +   +LT    T VSVI  C     L L   +   + +N I    +
Sbjct: 372 GQSAMAIELFKEM-ITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSIS 430

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
               ++  YS+CG MEDA ++F  M   +DVVS+  +ISG   +G    A+N    M   
Sbjct: 431 GHNAMIFMYSRCGSMEDAKRVFQEM-ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEG 489

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           G+ P+  T+  +LTA         HA                        G+L+E  KVF
Sbjct: 490 GIEPDRVTFIGVLTACS-------HA------------------------GLLEEGRKVF 518

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           E I +  I  ++ M+    ++G+ E A +   ++  E   P+   + S++NA
Sbjct: 519 ESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMPME---PHAGVYGSLLNA 567



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 130/569 (22%), Positives = 250/569 (43%), Gaps = 94/569 (16%)

Query: 10  LINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI 69
           LIN  T+     LR+P        LF+ +   N   +  +L  Y     H + + +F  +
Sbjct: 39  LINHCTR-----LRAP--PHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHM 91

Query: 70  RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
           +  G+         ++K+ G       G   H   +K G   D  V  +++D+Y R   +
Sbjct: 92  QGCGVRPDAFVYPILIKSAGN-----GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPI 146

Query: 130 EDGRRVFDDMN--ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
              R+VFD++   E  V  W +++SGY + +   +   LF  M     + N  T++ +  
Sbjct: 147 GHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP----ERNVITWTAM-- 200

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
                                            ++ Y K K +  AR  FD M +R  ++
Sbjct: 201 ---------------------------------VTGYAKVKDLEAARRYFDCMPERSVVS 227

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WN+M++GY  N L  E    F+ M  AG E   +T+V+VI  C++  +  LA  L   + 
Sbjct: 228 WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM-------------------------R 342
           +  I  +  +RT L+  Y+KCG +  A +IF  +                         R
Sbjct: 288 QKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSAR 347

Query: 343 EM------KDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAV 395
           E+      ++VV+W +MI+G+ QNG   +A+  F +M T + + P+  T   +++A   +
Sbjct: 348 ELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 407

Query: 396 SPFQVHAHIIKTNYEK----SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
              ++   +++   E     S S   A++  Y + G +++A +VF+ +  +D+V+++ ++
Sbjct: 408 GALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLI 467

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +G+A  G    A+ +   +   G++P+  TF  V+ AC+  +  +E+G++         +
Sbjct: 468 SGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS-HAGLLEEGRKVFESIKDPAI 526

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKR 540
           ++  C    +V +  + G +E A    +R
Sbjct: 527 DHYAC----MVDLLGRVGELEDAKRTMER 551



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 153/340 (45%), Gaps = 37/340 (10%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD- 93
           FD  P+R+ V +N +L  Y ++ L +E L LF  +   G+    +T  +V+  C    D 
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276

Query: 94  ----------HVFGRQVHC-----------ECVKSGFARDV--------NVST--SLVDL 122
                     H    Q++C           +C   G AR +        N  T  +++  
Sbjct: 277 CLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISA 336

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFT 181
           Y R  N++  R +F+ M   NVV+W S+++GYA+N  +   +ELF  M   + + P+  T
Sbjct: 337 YTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVT 396

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             +V+      G +     V   + +N  ++  S  NA+I MY +   + DA+ VF  M 
Sbjct: 397 MVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 456

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            RD +++N++++G+  +   +EA    + M   G E  R TF+ V+  C+    L   R+
Sbjct: 457 TRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRK 516

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           +   +    ID        ++    + G++EDA +    M
Sbjct: 517 VFESIKDPAIDH----YACMVDLLGRVGELEDAKRTMERM 552


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/659 (35%), Positives = 372/659 (56%), Gaps = 22/659 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALI--SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           QVH  ++K    +   +  A++  +  L    +  A ++F+ ++  +S  +N M+ G   
Sbjct: 39  QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAF 98

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                 A   F  M     +  + TF SV+K C+  K LR   Q+H+ +LK+G   +  +
Sbjct: 99  KRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFV 158

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              L+  Y+ CG++  A  +F  M E + +V+W +M+SG+ +NG  D  V  F ++    
Sbjct: 159 ENTLIQMYANCGQIGVARHVFDGMPE-RSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217

Query: 378 VRPNGFTYSIILTAQPAVSPFQVHA----HIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           +  +  T   +L A   ++  ++      +I+     ++ ++ T+L++ Y K G +D A 
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           K+F+ +D++D+VAWSAM++GYAQ    + A+ ++ ++    V PNE T  SV+ +C A  
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSC-AML 336

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            A E GK  H    K K+   + + + L+  Y+K G I+ + EVFK    +++ +W ++I
Sbjct: 337 GAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALI 396

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            G A +G  K ALE F  M   D++ + +TFIGV++AC+HA LVD+G+  F+ M  +  I
Sbjct: 397 QGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDI 456

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------------- 660
            P +EHY CMVD+  RAG LE+A   I+ MPF  +A VWRT+LA+CR             
Sbjct: 457 EPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLE 516

Query: 661 -LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
            +  L+P  S  Y+LLSN YA  G  ++  RVR L+ ++++KK  G S IE+    + F 
Sbjct: 517 HITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFF 576

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
           + D  H  S +I+  L+++  ++K  GY P+T     + ++E KE  +S HSE+LAIA+G
Sbjct: 577 SEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYG 636

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+ T     ++I KNLR+C DCH   K IS++  R I+VRD NRFHHFK+GLCSC DYW
Sbjct: 637 LIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 249/496 (50%), Gaps = 18/496 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVD--LYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           +QVH   +K+    D  ++ ++++    +  + ++    +F+ +++    ++  ++ G A
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
             +  D  L LF +M  + ++ + FTFS+VL   +    +    QVH +++K+G +    
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V N LI MY     +  AR VFDGM +R  + WNSM++GY  N L  E  + F  +    
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            E    T +SV+  C     L +   +   ++  G+  ++ + T L+  Y+KCG+++ A 
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           K+F  M + +DVV+W+AMISG+ Q      A+N F +M +  V PN  T   +L +   +
Sbjct: 278 KLFDEM-DKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAML 336

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             ++    VH +I K   + + ++GT L++ Y K G +D + +VF+ +  K++  W+A++
Sbjct: 337 GAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALI 396

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----S 506
            G A  G+ + A++ +  +    VKPN+ TF  V++AC+  +  V+QG+           
Sbjct: 397 QGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSH-ACLVDQGRHLFNSMRRDFD 455

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKA 565
           I+ ++ +  C    +V +  + G +E A +         + V W +++     H + + A
Sbjct: 456 IEPRIEHYGC----MVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMA 511

Query: 566 LEVFKEMRRQDLEFDG 581
            +  + + R +    G
Sbjct: 512 EKSLEHITRLEPAHSG 527



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 185/401 (46%), Gaps = 13/401 (3%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T SSVLK C  +     G QVH   +KSGF  +  V  +L+ +Y     +   R VFD M
Sbjct: 123 TFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGM 182

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E ++V+W S+LSGY +N + D V++LF ++    I+ +  T  +VL        +    
Sbjct: 183 PERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGE 242

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +   ++  G     ++  +LI MY K   V  AR +FD M+ RD + W++M++GY   +
Sbjct: 243 LIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQAD 302

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   F+ M          T VSV+  CA        + +H  + K  +     + T
Sbjct: 303 RCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGT 362

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+KCG ++ + ++F  M   K+V +WTA+I G   NG   +A+ FF  M    V+
Sbjct: 363 QLIDFYAKCGYIDRSVEVFKEM-SFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVK 421

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAK 434
           PN  T+  +L+A           H+  +     + E        +++   + G L+EA  
Sbjct: 422 PNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEA-- 479

Query: 435 VFELIDE----KDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            ++ ID      + V W  +LA      + E A K    +T
Sbjct: 480 -YQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHIT 519



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 185/415 (44%), Gaps = 39/415 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P+R+ V +N +L  Y ++ L  E + LF  I  L +     T+ SVL  CG L +
Sbjct: 178 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 237

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G  +    V  G  R+  ++TSL+D+Y +   V+  R++FD+M++ +VV+W++++SG
Sbjct: 238 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISG 297

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+       L LFH MQ   + PN  T  +VL   A  G   T   VH  + K   ++ 
Sbjct: 298 YAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT 357

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            ++   LI  Y K   +  +  VF  M  ++  TW +++ G   N     A E F++M  
Sbjct: 358 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 417

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT---GLMV-AYSKCG 329
              +    TF+ V+  C+    +   R L + + +   DFD   R    G MV    + G
Sbjct: 418 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRR---DFDIEPRIEHYGCMVDILGRAG 474

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E+A +    M    + V W  +++    +  I++A      +TR              
Sbjct: 475 FLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITR-------------- 520

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
                + P     +I+             L N Y   G +++A +V  LI EK+I
Sbjct: 521 -----LEPAHSGDYIL-------------LSNTYALVGRVEDAIRVRSLIKEKEI 557



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 5/167 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD   +R+ V ++ ++  Y +    +EALNLF  +++  +     T+ SVL +C  L
Sbjct: 277 RKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAML 336

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             +  G+ VH    K      V + T L+D Y +   ++    VF +M+  NV +WT+L+
Sbjct: 337 GAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALI 396

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-----GVLADEG 193
            G A N      LE F  M    +KPN  TF  VL       L D+G
Sbjct: 397 QGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQG 443


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/752 (34%), Positives = 387/752 (51%), Gaps = 89/752 (11%)

Query: 164 LELFHRMQVEGIKPNSFTF----------STVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           L L H   + G  P + T           ++++   A  G +  AV     V +   + V
Sbjct: 63  LRLIHLYTLSGDLPAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTV 122

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGM-------EDRDSITWNSMVAGYVTN-------E 259
               NA+IS Y ++     A AVF  +        D  S T     AG++ N       +
Sbjct: 123 LH--NAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQ 180

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L     ++    G  G     +  V++   C   +  R AR+    VL    D D    T
Sbjct: 181 LQCSVLKS----GAGGVLSVSNALVALYMKCEALEATRDARK----VLDEMPDKDALTWT 232

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            ++V Y + G +  A  +F  +    DVV W AMISG++ +G +  A   F +M  E V 
Sbjct: 233 TMVVGYVRRGDVGAARSVFEEVDVKFDVV-WNAMISGYVHSGMVVEAFELFRRMVLERVP 291

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIK------------------TNYEKSFSVGT 417
            + FT++ +L+A      F     VH  I +                  T Y K  ++  
Sbjct: 292 LDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAV 351

Query: 418 A-----------------LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           A                 +L+ YV+   LD+A +VFE +  K+ ++W  M++GY   G +
Sbjct: 352 ARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFS 411

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
           E A+K++ ++ +E VKP ++T++  I+AC     +++ GKQ H   ++     +    +A
Sbjct: 412 EDALKLFNRMRAEDVKPCDYTYAGAISAC-GELGSLKHGKQLHGHLVQLGFEGSNSAGNA 470

Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           L+TMY++ G ++ A+ +F      D VSWN+MI    QHGH ++ALE+F  M  + +  D
Sbjct: 471 LITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPD 530

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            I+F+ V+TAC H+GLVDEG QYF+ M  +  I P  +HY+ ++DL  RAG + +A D+I
Sbjct: 531 RISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLI 590

Query: 641 NRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQ 686
             MPF  + ++W  +L+ CR              L  + P     Y+LLSN Y+A G W 
Sbjct: 591 KTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWV 650

Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
           + ARVRKLM DR VKKE G SWIE  NK + F+ GD  HP+++++Y  LE +  R++  G
Sbjct: 651 DAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLG 710

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y PDT  VL D++   KE IL  HSERLA+ FGL+  P GA + ++KNLR+C DCH V+ 
Sbjct: 711 YVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMM 770

Query: 807 LISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +SK   R+IVVRD  RFHHFK+G CSCG+YW
Sbjct: 771 FMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 145/562 (25%), Positives = 255/562 (45%), Gaps = 87/562 (15%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNES--NVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
           +TSLV  Y     +      FD + ++  + V   +++S YAR       + +F  +   
Sbjct: 91  ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 174 G-IKPNSFTFSTVL---GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           G ++P+ ++F+ +L   G L +  +   A Q+   V+K+G   V SV NAL+++Y+K + 
Sbjct: 151 GSLRPDDYSFTALLSAAGHLPNISVRHCA-QLQCSVLKSGAGGVLSVSNALVALYMKCEA 209

Query: 230 V---RDARAVFDGMEDRDSITWNSMVAGYV---------------------------TNE 259
           +   RDAR V D M D+D++TW +MV GYV                           +  
Sbjct: 210 LEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGY 269

Query: 260 LH----MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           +H    +EAFE F  M L    L   TF SV+  CA        + +H Q+ +   +F  
Sbjct: 270 VHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVP 329

Query: 316 N----IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV---- 367
                +   L+  YSKCG +  A +IF  M+  KDVVSW  ++SG++++  +D AV    
Sbjct: 330 EAALPVNNALVTLYSKCGNIAVARRIFDNMKS-KDVVSWNTILSGYVESSCLDKAVEVFE 388

Query: 368 ---------------------------NFFCQMTREGVRPNGFTYSIILTAQPAVSPF-- 398
                                        F +M  E V+P  +TY+  ++A   +     
Sbjct: 389 EMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKH 448

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             Q+H H+++  +E S S G AL+  Y + G + EA  +F ++   D V+W+AM++   Q
Sbjct: 449 GKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQ 508

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G    A++++ ++ +EG+ P+  +F +V+ AC   S  V++G Q+   S+K        
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNH-SGLVDEGFQYFE-SMKRDFGIIPG 566

Query: 517 VS--SALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKALEVFKEMR 573
               + L+ +  + G I  A ++ K        S W +++ G    G  +       ++ 
Sbjct: 567 EDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF 626

Query: 574 RQDLEFDGITFIGVITACTHAG 595
           +   + DG T+I +    + AG
Sbjct: 627 KMTPQHDG-TYILLSNTYSAAG 647



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 232/526 (44%), Gaps = 97/526 (18%)

Query: 33  SLFDRSPQ--RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCG 89
           S FD  PQ  R+ V +N ++  Y R S    A+ +F  +   G L     + +++L   G
Sbjct: 109 SFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAG 168

Query: 90  CLFDHVFGR---QVHCECVKSGFARDVNVSTSLVDLYMRTNNVE---DGRRVFDDMNESN 143
            L  ++  R   Q+ C  +KSG    ++VS +LV LYM+   +E   D R+V D+M + +
Sbjct: 169 HL-PNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKD 227

Query: 144 VVSWTSL-------------------------------LSGYARNKMNDRVLELFHRMQV 172
            ++WT++                               +SGY  + M     ELF RM +
Sbjct: 228 ALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVL 287

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG----GEVVTSVCNALISMYLKSK 228
           E +  + FTF++VL   A+ G  A    VH  + +       E    V NAL+++Y K  
Sbjct: 288 ERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCG 347

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYV-----------------TNELHM--------- 262
            +  AR +FD M+ +D ++WN++++GYV                  NEL           
Sbjct: 348 NIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVH 407

Query: 263 -----EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                +A + FN M     +    T+   I  C     L+  +QLH  +++ G +  ++ 
Sbjct: 408 GGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSA 467

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              L+  Y++CG +++A+ +F +M  + D VSW AMIS   Q+G    A+  F +M  EG
Sbjct: 468 GNALITMYARCGAVKEANLMFLVMPNI-DSVSWNAMISALGQHGHGREALELFDRMVAEG 526

Query: 378 VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE------KSFSV------GTALLNAYVK 425
           + P+  ++  +LTA         H+ ++   ++      + F +       T L++   +
Sbjct: 527 IYPDRISFLTVLTACN-------HSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGR 579

Query: 426 KGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            G + EA  + + +  E     W A+L+G    GD E       QL
Sbjct: 580 AGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQL 625



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 183/396 (46%), Gaps = 43/396 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL---PLFGSTLSSVLKTC 88
           +S+F+    +  V +N ++  Y    +  EA  LF   RR+ L   PL   T +SVL  C
Sbjct: 248 RSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELF---RRMVLERVPLDEFTFTSVLSAC 304

Query: 89  GCLFDHVFGRQVHCEC--VKSGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
                   G+ VH +   ++  F  +  + V+ +LV LY +  N+   RR+FD+M   +V
Sbjct: 305 ANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDV 364

Query: 145 VSWTSLLSGYARNKMNDRVLE-------------------------------LFHRMQVE 173
           VSW ++LSGY  +   D+ +E                               LF+RM+ E
Sbjct: 365 VSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAE 424

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
            +KP  +T++  +    + G +    Q+H  +++ G E   S  NALI+MY +   V++A
Sbjct: 425 DVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEA 484

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
             +F  M + DS++WN+M++    +    EA E F+ M   G    R +F++V+  C  +
Sbjct: 485 NLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHS 544

Query: 294 KELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
             +    Q    + ++ GI    +  T L+    + G++ +A  +   M        W A
Sbjct: 545 GLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEA 604

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           ++SG   +G ++L  +   Q+ +   + +G TY ++
Sbjct: 605 ILSGCRTSGDMELGAHAADQLFKMTPQHDG-TYILL 639



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 127/315 (40%), Gaps = 36/315 (11%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K   +F+  P +N + +  ++  Y      ++AL LF  +R   +     T +  +  CG
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACG 441

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G+Q+H   V+ GF    +   +L+ +Y R   V++   +F  M   + VSW +
Sbjct: 442 ELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNA 501

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++S   ++      LELF RM  EGI P+  +F TVL      G+V    Q    + ++ 
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDF 561

Query: 210 GEVV-TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +        LI +  ++  + +AR +   M                        FE  
Sbjct: 562 GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMP-----------------------FEP- 597

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
                     T S + +++  C T+ ++ L      Q+ K     D      L   YS  
Sbjct: 598 ----------TPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD-GTYILLSNTYSAA 646

Query: 329 GKMEDASKIFSMMRE 343
           G+  DA+++  +MR+
Sbjct: 647 GRWVDAARVRKLMRD 661


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/654 (35%), Positives = 362/654 (55%), Gaps = 49/654 (7%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFD ++ R++ +W+ +V  YV N ++ EA E +  M      +   T  SV+  C  
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM-------- 344
             ++   R +  +  + G + D  + T L+  ++KCG +E+A  +F  M  M        
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 345 ---------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
                                KDVVSW AMI+ +   G    A + F +M   G  P+ +
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIY 180

Query: 384 TYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T+S IL A  +    +    +H  I    +++ F++   L++ Y + G L+ A + F  I
Sbjct: 181 TFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSI 240

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
           ++K++ AW+ MLA YAQ    + A+ +Y+ +  EG  P+ FTFSSV+++C A   A+ +G
Sbjct: 241 EKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSC-ASLGALREG 299

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
           K  H CS        + + +ALV MY+K G++  A + F     +D+VSW++MI   AQH
Sbjct: 300 KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQH 359

Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
           GH ++ALE+   M  Q +  + +T   V+ AC+H G + EG  YF  +  +  I    E+
Sbjct: 360 GHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEEN 419

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQ 665
               +DL  RAG L++A  +++ MPF  S     T+L  C              R+++L+
Sbjct: 420 TVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALE 479

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P +   YVLL+NMYAA G W + A++R+ M  + VK++ G S IE ++K Y F  GD S+
Sbjct: 480 PENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSN 539

Query: 726 PQSNQIYSKLEELSTRLKDA-GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           P++ +I ++LE L +R+K+  GY PDT  V  D+ D+ KE +L  HSE++A+ FGL+ +P
Sbjct: 540 PRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSP 599

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G+ L+I+KNLRVC DCHTV KL SK+  R I+VRD  RFHHF+ G+CSCGDYW
Sbjct: 600 PGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 189/390 (48%), Gaps = 31/390 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR  QRN   ++ L+  Y +++++QEAL ++  + R  + +   TLSSVL  C  L
Sbjct: 2   RQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKL 61

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE--------------------- 130
            D   GR V  +  + GF +DV V+TSL+ L+ +   +E                     
Sbjct: 62  LDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAM 121

Query: 131 ---------DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                    D + +F  M+  +VVSW ++++ Y     +     LFHRM   G  P+ +T
Sbjct: 122 IGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYT 181

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           FS++LG  A    +     +H  +   G +   ++ N LISMY +   +  AR  F  +E
Sbjct: 182 FSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIE 241

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            ++   WN+M+A Y   +   +A   + NM L G    R TF SV+  CA+   LR  + 
Sbjct: 242 KKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKF 301

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H      G + D  + T L+  Y+KCG + DA K F  +   KDVVSW+AMI+   Q+G
Sbjct: 302 IHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISN-KDVVSWSAMIAASAQHG 360

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             + A+     M  +G+  N  T S +L A
Sbjct: 361 HAEEALELSHLMNLQGIAQNEVTASSVLHA 390



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 177/417 (42%), Gaps = 33/417 (7%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  +SLF     ++ V +N ++  Y      ++A +LF  +  LG      T SS+L  C
Sbjct: 130 KDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGAC 189

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                   GR +H      GF RD  +  +L+ +Y R  ++E  RR F  + +  + +W 
Sbjct: 190 ASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYSIEKKELGAWN 249

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++L+ YA+       L L+  M +EG  P+ FTFS+V+   A  G +     +H      
Sbjct: 250 TMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSC 309

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G E    +  AL++MY K   + DA+  FDG+ ++D ++W++M+A    +    EA E  
Sbjct: 310 GFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELS 369

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSK 327
           + M L G      T  SV+  C+    L         + ++ GI+ D     G +    +
Sbjct: 370 HLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGR 429

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
            G +++A  +   M      V+   ++ G              C++  +  R   FT  I
Sbjct: 430 AGWLKEAEHVLHTMPFKVSFVALVTLLGG--------------CKVHGDVRRGKAFTKRI 475

Query: 388 ILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           +     A+ P    ++++             L N Y   G  D+ AK+   + +K +
Sbjct: 476 V-----ALEPENPGSYVL-------------LNNMYAAAGRWDDVAKLRRYMRKKGV 514


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/710 (33%), Positives = 396/710 (55%), Gaps = 39/710 (5%)

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALI 221
           + LEL+  M+  GI  + F  ++++        +    ++H  +I  G      +  AL+
Sbjct: 13  QALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALL 72

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
            MY K   + DA+ VF+GME +D   W+S++A Y        A   +  M   G E    
Sbjct: 73  QMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVV 132

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           TF   +  CA+   L   R +H ++L + +  D  ++  L+  Y KC +M +A K+F  M
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 192

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSPFQ- 399
           +  ++V S+TAMIS ++Q G    A+  F +M++ E + PN +T++ IL A   +   + 
Sbjct: 193 K-ARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK 251

Query: 400 ---VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
              VH H+    ++ +  V  AL+  Y K G   EA KVF+ +  +++++W++M+A YAQ
Sbjct: 252 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ 311

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G+ + A+ +++++    V+P+  +FSS +NAC A   A+++G++ H   ++A L +   
Sbjct: 312 HGNPQEALNLFKRMD---VEPSGVSFSSALNAC-ALLGALDEGREIHHRVVEANLASPQ- 366

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           + ++L++MY++ G+++ A  VF R + RD  S N+MI  + QHG  K+AL ++++M ++ 
Sbjct: 367 METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEG 426

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +  DGITF+ V+ AC+H  LV + + +   +V +H + P +EHY CMVD+  R+G L  A
Sbjct: 427 IPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDA 486

Query: 637 MDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAAT 682
            +++  MP+ A A  W T+L+ C              ++  L P ++  YV LSNMYAA 
Sbjct: 487 EELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAA 546

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN-------QIYSKL 735
             + +  RVRK M +R V +    S+IE+ N+ + F +G     Q         ++ S L
Sbjct: 547 KRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLL 606

Query: 736 EELSTRLKDAGYKPDTSYVLQD----IDDEHKEAILSQHSERLAIAFGLVAT--PAGA-P 788
            EL   +K AGY PDT  V  +      +E K+  L  HSERLAIA+GL+A   P  + P
Sbjct: 607 VELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRP 666

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L++V + RVC  CH+ IKL+S +  + I VRD +RFHHF++G CSCGD+W
Sbjct: 667 LRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDHW 716



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 268/516 (51%), Gaps = 19/516 (3%)

Query: 55  RDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
           R+    +AL L+  +   G+      ++S++  C  L     GR++H   + +GF  D+ 
Sbjct: 7   REGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIP 66

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
           + T+L+ +Y +  +++D +RVF+ M   ++ +W+S+++ YAR    +  + L+ RM  EG
Sbjct: 67  LETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEG 126

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           ++PN  TF+  LG  A    +A    +H  ++ +       + ++L++MYLK   + +AR
Sbjct: 127 VEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEAR 186

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA-ELTRSTFVSVIKLCATT 293
            VF+GM+ R+  ++ +M++ YV    H EA E F+ M    A E    TF +++      
Sbjct: 187 KVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGL 246

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L   R++H  +   G D +  ++  L+  Y KCG   +A K+F  M   ++V+SWT+M
Sbjct: 247 GNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSM-TARNVISWTSM 305

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           I+ + Q+G    A+N F +M    V P+G ++S  L A   +       ++H  +++ N 
Sbjct: 306 IAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEANL 362

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
             S  + T+LL+ Y + G LD+A +VF  +  +D  + +AM+A + Q G  + A++IYR+
Sbjct: 363 -ASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRK 421

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC----SIKAKLNNALCVSSALVTMY 525
           +  EG+  +  TF SV+ AC+  S   +      +      +   + + LC    +V + 
Sbjct: 422 MEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLC----MVDVL 477

Query: 526 SKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
            + G +  A E+ +    + D V+W +++ G  +HG
Sbjct: 478 GRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHG 513



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 219/398 (55%), Gaps = 12/398 (3%)

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           M+A  V     ++A E +  M   G    +    S++  C   + L   R+LH  ++  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
              D  + T L+  Y+KCG ++DA ++F  M E+KD+ +W+++I+ + + G  ++AV  +
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGM-EIKDLFAWSSIIAAYARAGRGEMAVVLY 119

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M  EGV PN  T++  L    +V+       +H  I+ +   +   +  +LLN Y+K 
Sbjct: 120 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSSV 485
             + EA KVFE +  +++ +++AM++ Y Q G+   A++++ +++  E ++PN +TF+++
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + A       +E+G++ H        +  + V +ALVTMY K G+   A +VF     R+
Sbjct: 240 LGAVEG-LGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARN 298

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           ++SW SMI  YAQHG+ ++AL +FK M   D+E  G++F   + AC   G +DEG++   
Sbjct: 299 VISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHH 355

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            +V  +   P ME  + ++ +Y+R G L+ A  + NRM
Sbjct: 356 RVVEANLASPQME--TSLLSMYARCGSLDDARRVFNRM 391



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 223/446 (50%), Gaps = 12/446 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+    ++   ++ ++  Y R    + A+ L+  +   G+     T +  L  C  +
Sbjct: 85  KRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASV 144

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR +H   + S   +D  +  SL+++Y++ + + + R+VF+ M   NV S+T+++
Sbjct: 145 AGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMI 204

Query: 152 SGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           S Y +   +   LELF RM +VE I+PN++TF+T+LG +   G +    +VH  +   G 
Sbjct: 205 SAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGF 264

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    V NAL++MY K     +AR VFD M  R+ I+W SM+A Y  +    EA   F  
Sbjct: 265 DTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKR 324

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M +   E +  +F S +  CA    L   R++H +V++  +     + T L+  Y++CG 
Sbjct: 325 MDV---EPSGVSFSSALNACALLGALDEGREIHHRVVEANL-ASPQMETSLLSMYARCGS 380

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA ++F+ M+  +D  S  AMI+   Q+G    A+  + +M +EG+  +G T+  +L 
Sbjct: 381 LDDARRVFNRMK-TRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLV 439

Query: 391 AQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDI 444
           A    S        + + ++             +++   + G L +A ++ E +  + D 
Sbjct: 440 ACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADA 499

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQL 470
           VAW  +L+G  + GD +   +  R++
Sbjct: 500 VAWMTLLSGCKRHGDLDRGERAARKV 525



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 12/291 (4%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS 83
           SP  ++K   +FD    RN + +  ++  Y +    QEALNLF   +R+ +   G + SS
Sbjct: 283 SPVEARK---VFDSMTARNVISWTSMIAAYAQHGNPQEALNLF---KRMDVEPSGVSFSS 336

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
            L  C  L     GR++H   V++  A    + TSL+ +Y R  +++D RRVF+ M   +
Sbjct: 337 ALNACALLGALDEGREIHHRVVEANLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRD 395

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VH 202
             S  ++++ + ++    + L ++ +M+ EGI  +  TF +VL   +   +VA     + 
Sbjct: 396 AFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQ 455

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTN-EL 260
           ++V+ +G   +      ++ +  +S  + DA  + + M    D++ W ++++G   + +L
Sbjct: 456 SLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDL 515

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
                       LA AE     F+S   + A  K    AR++  ++ + G+
Sbjct: 516 DRGERAARKVFELAPAETLPYVFLS--NMYAAAKRFDDARRVRKEMEERGV 564


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 267/816 (32%), Positives = 416/816 (50%), Gaps = 100/816 (12%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV---EDGRRV 135
           STL S+L++C C       +Q+  + + +G   D   ++ L++    +  +       R+
Sbjct: 4   STLDSLLQSCKCPRHF---KQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRI 60

Query: 136 FDDMNESNVVSWTSLLSG--YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           F+ +   N  +W +++    Y +N  +  +L  +        KP+S+T+  +L   A   
Sbjct: 61  FNHLRNPNTFTWNTIMRAHLYLQNSPHQALLH-YKLFLASHAKPDSYTYPILLQCCAARV 119

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
                 Q+H   + +G +    V N L+++Y     V  AR VF+     D ++WN+++A
Sbjct: 120 SEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLA 179

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           GYV      EA   F  M        R+T  S                            
Sbjct: 180 GYVQAGEVEEAERVFEGMP------ERNTIAS---------------------------- 205

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMR-EMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
                  ++  + + G +E A +IF+ +R   +D+VSW+AM+S + QN   + A+  F +
Sbjct: 206 -----NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVE 260

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M   GV  +       L+A   V   +    VH   +K   E   S+  AL++ Y   G 
Sbjct: 261 MKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGE 320

Query: 429 LDEAAKVF----ELID----------------------------EKDIVAWSAMLAGYAQ 456
           + +A ++F    EL+D                            EKD+V+WSAM++GYAQ
Sbjct: 321 IVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQ 380

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
                 A+ +++++   GV+P+E    S I+ACT   A ++ GK  HA   + KL   + 
Sbjct: 381 HECFSEALALFQEMQLHGVRPDETALVSAISACTH-LATLDLGKWIHAYISRNKLQVNVI 439

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           +S+ L+ MY K G +E+A EVF    ++ + +WN++I G A +G  +++L +F +M++  
Sbjct: 440 LSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTG 499

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
              + ITF+GV+ AC H GLV++G+ YF+ M++EH I   ++HY CMVDL  RAG+L++A
Sbjct: 500 TVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEA 559

Query: 637 MDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
            ++I+ MP A     W  +L ACR              LI LQP     +VLLSN+YA+ 
Sbjct: 560 EELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASK 619

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
           G+W     +R +M    V K  G S IE     + FLAGD +HPQ N I   L+ ++ +L
Sbjct: 620 GNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLDVVAAKL 679

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           K  GY P TS V  DID+E KE  L +HSE+LA+AFGL+      P+++ KNLR+C DCH
Sbjct: 680 KIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTKNLRICNDCH 739

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           TV+KLISK   RDIVVRD +RFHHFK G CSC D+W
Sbjct: 740 TVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/603 (24%), Positives = 267/603 (44%), Gaps = 94/603 (15%)

Query: 25  PF-YSKKDQSLFDRSPQRNFVEYNRLLFE--YCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           PF YS +   +F+     N   +N ++    Y ++S HQ  L+  L +     P    T 
Sbjct: 53  PFHYSLR---IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKP-DSYTY 108

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
             +L+ C        GRQ+H   V SGF  DV V  +L++LY    +V   RRVF++   
Sbjct: 109 PILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPV 168

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            ++VSW +LL+GY +    +    +F  M      P   T ++                 
Sbjct: 169 LDLVSWNTLLAGYVQAGEVEEAERVFEGM------PERNTIAS----------------- 205

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNE 259
                           N++I+++ +   V  AR +F+G+   +RD ++W++MV+ Y  NE
Sbjct: 206 ----------------NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNE 249

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           +  EA   F  M  +G  +     VS +  C+    + + R +H   +K G++   +++ 
Sbjct: 250 MGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKN 309

Query: 320 GLMVAYSKCGKMEDASKIFSMMREM-------------------------------KDVV 348
            L+  YS CG++ DA +IF    E+                               KDVV
Sbjct: 310 ALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVV 369

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           SW+AMISG+ Q+     A+  F +M   GVRP+       ++A   ++       +HA+I
Sbjct: 370 SWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYI 429

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
            +   + +  + T L++ Y+K G ++ A +VF  ++EK +  W+A++ G A  G  E ++
Sbjct: 430 SRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSL 489

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HACSIKAKLNNALCVSS 519
            ++  +   G  PNE TF  V+ AC      V  G+ +     H   I+A + +  C   
Sbjct: 490 NMFADMKKTGTVPNEITFMGVLGACRH-MGLVNDGRHYFNSMIHEHKIEANIKHYGC--- 545

Query: 520 ALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
            +V +  + G ++ A E+        D+ +W +++    +H   +    + +++ +   +
Sbjct: 546 -MVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPD 604

Query: 579 FDG 581
            DG
Sbjct: 605 HDG 607


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/584 (39%), Positives = 352/584 (60%), Gaps = 26/584 (4%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T+ T+  +I  C     L     LH  ++ +G D D  + T L+  YS+   +++A K+F
Sbjct: 77  TQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVF 136

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
              R+ + +  W A+       G     ++ + +M R GV  + FTY+ +L A  A   F
Sbjct: 137 DKTRK-RTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195

Query: 399 --------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                   ++H HI++  +E    + T LL+ Y + G +  A++VF+ +  K++V+WSAM
Sbjct: 196 VSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAM 255

Query: 451 LAGYAQIGDTEGAVKIYRQ--LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +A Y++ G    A++++R+  L ++ + PN  T  SV+ AC A  AA+EQGK  H   ++
Sbjct: 256 IACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAA-LAALEQGKLMHGYILR 314

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L++ L V SALVT+Y++ GN+E    VF+R  KRD+VSWNS+I  Y  HG  +KA+++
Sbjct: 315 RGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQI 374

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           FKEM  Q L    I+F+ V+ AC+HAGLV+EG+  F+ MV  H I+P++EHY+CMVDL  
Sbjct: 375 FKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLG 434

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RA  L++A  II+ M       VW ++L +CR              L  L+P ++  YVL
Sbjct: 435 RANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVL 494

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+++YA    W E  RV+ L+  R ++K  G S IE++ K YSF++ D  +PQ  Q+++ 
Sbjct: 495 LADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHAL 554

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L +LS  +K+ GY PDT  VL D+D E KE I+  HSE+LA+AFGL+ +  G  ++I KN
Sbjct: 555 LLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKN 614

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR+C DCH+V K ISK   R+I+VRD NRFH F++G+CSCGDYW
Sbjct: 615 LRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 191/377 (50%), Gaps = 13/377 (3%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P   T+  ++     +  +   + +H  +I +G +    +   LI+MY +   + +AR V
Sbjct: 76  PTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE- 295
           FD    R    WN++           E  + +  M   G    R T+  V+K C  ++  
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195

Query: 296 ---LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              L   R++H  +L++G +   +I T L+  Y++ G + +AS++F  M  +K+VVSW+A
Sbjct: 196 VSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQM-PVKNVVSWSA 254

Query: 353 MISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
           MI+ + +NG    A+  F +M  E   + PN  T   +L A  A++  +    +H +I++
Sbjct: 255 MIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILR 314

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
              +    V +AL+  Y + G L+   +VFE ++++D+V+W+++++ Y   G    A++I
Sbjct: 315 RGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQI 374

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA-KLNNALCVSSALVTMY 525
           ++++  +G+ P+  +F SV+ AC+  +  VE+GK      ++  K+  ++   + +V + 
Sbjct: 375 FKEMIDQGLSPSPISFVSVLGACSH-AGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLL 433

Query: 526 SKKGNIESASEVFKRQR 542
            +   ++ A+++    R
Sbjct: 434 GRANRLDEAAKIIDDMR 450



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 163/306 (53%), Gaps = 17/306 (5%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL-----L 151
           G  +H   +  G  +D  ++T L+++Y   +++++ R+VFD   +  +  W +L     L
Sbjct: 97  GIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTL 156

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAV---QVHTMVIK 207
           +GY R      VL+L+ RM   G+  + FT++ VL   +A E  V+  +   ++H  +++
Sbjct: 157 AGYGRE-----VLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILR 211

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +G E    +   L+ MY +   V +A  VFD M  ++ ++W++M+A Y  N   +EA E 
Sbjct: 212 HGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALEL 271

Query: 268 FNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           F  M L   +L  +  T VSV++ CA    L   + +H  +L+ G+D    + + L+  Y
Sbjct: 272 FRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVY 331

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           ++CG +E   ++F  M E +DVVSW ++IS +  +G    A+  F +M  +G+ P+  ++
Sbjct: 332 ARCGNLELGHRVFERM-EKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISF 390

Query: 386 SIILTA 391
             +L A
Sbjct: 391 VSVLGA 396



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 169/344 (49%), Gaps = 11/344 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD++ +R    +N L          +E L+L+  + R+G+P    T + VLK   C+
Sbjct: 133 RKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLK--ACV 190

Query: 92  FDHVF------GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
               F      GR++H   ++ GF   V++ T+L+D+Y R   V +  RVFD M   NVV
Sbjct: 191 ASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVV 250

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           SW+++++ Y++N      LELF +M +E   + PNS T  +VL   A    +     +H 
Sbjct: 251 SWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHG 310

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            +++ G + +  V +AL+++Y +   +     VF+ ME RD ++WNS+++ Y  +    +
Sbjct: 311 YILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRK 370

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A + F  M   G   +  +FVSV+  C+    +   + L   +++    F        MV
Sbjct: 371 AIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMV 430

Query: 324 -AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               +  ++++A+KI   MR       W +++     +  ++LA
Sbjct: 431 DLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELA 474


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/583 (38%), Positives = 343/583 (58%), Gaps = 24/583 (4%)

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +GA   R T   ++   A   +L  AR+L  ++ +  +    NI  G    Y K G +  
Sbjct: 70  SGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNV-MSWNILFG---GYIKNGDLGG 125

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A K+F  M E ++V +W AM++G    G  + ++ FF  M REG+ P+ F    +     
Sbjct: 126 ARKLFDEMPE-RNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCA 184

Query: 392 --QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             +  V+  QVHA+++++  ++   VG++L + Y++ G L E   V  ++    IV+ + 
Sbjct: 185 GLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNT 244

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++AG  Q GD+EGA++ +  + S GV  +  TF S I++C+   AA+ QG+Q H   +KA
Sbjct: 245 IIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS-DLAALAQGQQIHGQVMKA 303

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            ++  + V + LV MYS+ G +  +  VF      D    ++MI  Y  HGH +KA+E+F
Sbjct: 304 GVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELF 363

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           K+M     E   +TF+ ++ AC+H+GL +EG   F++M   + + P+++HY+C+VDL  R
Sbjct: 364 KQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGR 423

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLL 675
           +G L++A  +I  MP      +W+T+L+AC              R+I L PHDSA YVLL
Sbjct: 424 SGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLL 483

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN+ A +  W + + VRK M D  V+KE G SW+E+K   + F  GD SHP+  +I   L
Sbjct: 484 SNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECL 543

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           EE+  +++  GY PD S VL D++DE KE  LS HSE+LAIAF  ++ P G P++++KNL
Sbjct: 544 EEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNL 603

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           RVC DCH  IKL+S++  R+IVVRD +RFHHFK+G CSC DYW
Sbjct: 604 RVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 197/412 (47%), Gaps = 14/412 (3%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G   + FT + ++   AD G +  A ++   + +     V S  N L   Y+K+  +  A
Sbjct: 71  GAATDRFTANHLMLAYADLGDLTAARELFERIPRRN---VMSW-NILFGGYIKNGDLGGA 126

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R +FD M +R+  TWN+MVAG        E+   F +M   G         SV + CA  
Sbjct: 127 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 186

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           +++   RQ+H+ V+++G+D D  + + L   Y +CG +++   +  M+  +  +VS   +
Sbjct: 187 RDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLS-IVSCNTI 245

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           I+G  QNG  + A+ +FC M   GV  +  T+   +++   ++      Q+H  ++K   
Sbjct: 246 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 305

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +K   V T L++ Y + G L ++ +VF      D    SAM++ Y   G  + A+++++Q
Sbjct: 306 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 365

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           + + G +P++ TF +++ AC+      E    F   +    +  ++   + +V +  + G
Sbjct: 366 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 425

Query: 530 NIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
            ++ A   +       D V W +++        T+K  ++ + + ++ +E D
Sbjct: 426 CLDEAEALILSMPLTPDGVIWKTLLSAC----KTQKNFDMAERIAKRVIELD 473



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+RN   +N ++         +E+L  FL +RR G+      L SV + C  L
Sbjct: 127 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 186

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V GRQVH   V+SG  RD+ V +SL  +YMR   +++G  V   +   ++VS  +++
Sbjct: 187 RDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTII 246

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G  +N  ++  LE F  M+  G+  +  TF + +   +D   +A   Q+H  V+K G +
Sbjct: 247 AGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVD 306

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V  V   L+ MY +   + D+  VF G    D+   ++M++ Y  +    +A E F  M
Sbjct: 307 KVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQM 366

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID-FDHNIRTGLM---VAYSK 327
              GAE +  TF++++  C+           HS + + G+D F+   +T  M   V +  
Sbjct: 367 MNGGAEPSDVTFLALLYACS-----------HSGLKEEGMDCFELMTKTYGMQPSVKHYT 415

Query: 328 C--------GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           C        G +++A  +   M    D V W  ++S        D+A
Sbjct: 416 CVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 462



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 165/351 (47%), Gaps = 13/351 (3%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V     L   Y++  ++   R++FD+M E NV +W ++++G      ++  L  F  M
Sbjct: 105 RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDM 164

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           + EG+ P+ F   +V    A    V T  QVH  V+++G +    V ++L  MY++   +
Sbjct: 165 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCL 224

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           ++  AV   +     ++ N+++AG   N     A E F  M   G      TFVS I  C
Sbjct: 225 QEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC 284

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           +    L   +Q+H QV+K G+D    + T L+  YS+CG + D+ ++F       D    
Sbjct: 285 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF-FGYCGSDTFLL 343

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAH 403
           +AMIS +  +G    A+  F QM   G  P+  T+  +L A       +  +  F++   
Sbjct: 344 SAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL--- 400

Query: 404 IIKT-NYEKSFSVGTALLNAYVKKGILDEA-AKVFELIDEKDIVAWSAMLA 452
           + KT   + S    T +++   + G LDEA A +  +    D V W  +L+
Sbjct: 401 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 451



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 38/283 (13%)

Query: 385 YSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +S +  A  A+ P  Q+HA    +           L+ AY   G L  A ++FE I  ++
Sbjct: 47  FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTS------------------------------- 472
           +++W+ +  GY + GD  GA K++ ++                                 
Sbjct: 107 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 166

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           EG+ P+EF   SV   C      V  G+Q HA  +++ L+  +CV S+L  MY + G ++
Sbjct: 167 EGMHPDEFGLGSVFRCCAGLRDVV-TGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 225

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
               V +      +VS N++I G  Q+G ++ ALE F  MR   +  D +TF+  I++C+
Sbjct: 226 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 285

Query: 593 HAGLVDEGQQYFDIMVNE--HHIYPTMEHYSCMVDLYSRAGML 633
               + +GQQ    ++      + P M   +C+V +YSR G L
Sbjct: 286 DLAALAQGQQIHGQVMKAGVDKVVPVM---TCLVHMYSRCGCL 325


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/686 (35%), Positives = 380/686 (55%), Gaps = 37/686 (5%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           + PN++TF   L   +          +H   I  G +    V  AL+ MY+K   + DA 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL--TRSTFVSVIKLCAT 292
            +F  M  RD + WN+M+AGY  + ++  A     +M +    L    ST V+++ L A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 293 TKELRLARQLHSQVLKNGIDFDHN----------IRTGLMVAYSKCGKMEDASKIFSMMR 342
              L     +H+  ++  +  + N          + T L+  Y+KCG +  A ++F  M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM- 184

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
             ++ V+W+A+I G +    +  A   F  M  +G+     + + I +A  A +      
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLR 242

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              Q+HA + K+      + G +LL+ Y K G++D+A  +F+ +  KD V++SA+++GY 
Sbjct: 243 MGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYV 302

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G  E A  +++++ +  V+P+  T  S+I AC+   AA++ G+  H   I   L +  
Sbjct: 303 QNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH-LAALQHGRCSHGSVIIRGLASET 361

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            + +AL+ MY+K G I+ + +VF     RD+VSWN+MI GY  HG  K+A  +F EM   
Sbjct: 362 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNL 421

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
               DG+TFI +++AC+H+GLV EG+ +F +M + + + P MEHY CMVDL SR G L++
Sbjct: 422 GFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDE 481

Query: 636 AMDIINRMPFAASATVWRTVLAACRLI--------------SLQPHDSAIYVLLSNMYAA 681
           A + I  MP  A   VW  +L ACR+                L P  +  +VLLSN+Y+A
Sbjct: 482 AYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 541

Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
            G + E A VR +   +  KK  G SWIE+    ++F+ GD SHPQS +IY +L+ +   
Sbjct: 542 AGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVG 601

Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
           +K  GY+PDTS+VLQD+++E KE  L  HSE+LAIA+G+++      + + KNLRVCGDC
Sbjct: 602 IKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDC 661

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHF 827
           HTVIK IS ++RR I+VRD NRFHHF
Sbjct: 662 HTVIKHISLVKRRAIIVRDANRFHHF 687



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 252/496 (50%), Gaps = 27/496 (5%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T    LK C  L DH  GR +H   + +G   D+ VST+L+D+Y++   + D   +F  M
Sbjct: 12  TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLE--LFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
              ++V+W ++L+GYA + M    +   L  +MQ+  ++PN+ T   +L +LA +G +A 
Sbjct: 72  PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131

Query: 198 AVQVHTMVI-------KNGGEVVTS---VCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
              VH   I       +N    +T    +  AL+ MY K   +  AR VFD M  R+ +T
Sbjct: 132 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 191

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           W++++ G+V      +AF  F  M   G   L+ ++  S ++ CA+   LR+  QLH+ +
Sbjct: 192 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 251

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            K+G+  D      L+  Y+K G ++ A  +F  M  +KD VS++A++SG++QNG  + A
Sbjct: 252 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEM-AVKDTVSYSALVSGYVQNGRAEEA 310

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNA 422
              F +M    V P+  T   ++ A   ++  Q     H  +I        S+  AL++ 
Sbjct: 311 FLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDM 370

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G +D + +VF ++  +DIV+W+ M+AGY   G  + A  ++ ++ + G  P+  TF
Sbjct: 371 YAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTF 430

Query: 483 SSVINACTAPSAAVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
             +++AC+     +E    FH       +  ++ + +C    +V + S+ G ++ A E  
Sbjct: 431 ICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYIC----MVDLLSRGGFLDEAYEFI 486

Query: 539 KRQRKR-DLVSWNSMI 553
           +    R D+  W +++
Sbjct: 487 QSMPLRADVRVWVALL 502



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 165/347 (47%), Gaps = 9/347 (2%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST-LS 82
           S  Y+++   +FD  P RN V ++ L+  +   S   +A  LF  +   GL     T ++
Sbjct: 173 SLLYARR---VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA 229

Query: 83  SVLKTCGCLFDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           S L+ C  L DH+  G Q+H    KSG   D+    SL+ +Y +   ++    +FD+M  
Sbjct: 230 SALRACASL-DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            + VS+++L+SGY +N   +    +F +MQ   ++P++ T  +++   +    +      
Sbjct: 289 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 348

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  VI  G    TS+CNALI MY K   +  +R VF+ M  RD ++WN+M+AGY  + L 
Sbjct: 349 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 408

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            EA   F  M   G      TF+ ++  C+ +  L +  +    V+ +G      +   +
Sbjct: 409 KEATALFLEMNNLGFPPDGVTFICLLSACSHSG-LVIEGKHWFHVMGHGYGLTPRMEHYI 467

Query: 322 MVA--YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            +    S+ G +++A +    M    DV  W A++        IDL 
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLG 514



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 143/288 (49%), Gaps = 19/288 (6%)

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M R  V PN +T+   L A  A++       +H H I    +    V TALL+ YVK   
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK--IYRQLTSEGVKPNEFTFSSVI 486
           L +AA +F  +  +D+VAW+AMLAGYA  G    AV   +  Q+    ++PN  T  +++
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 487 NACTAPSAAVEQGKQFHACSIKA----------KLNNALCVSSALVTMYSKKGNIESASE 536
               A   A+ QG   HA  I+A          KL + + + +AL+ MY+K G++  A  
Sbjct: 121 -PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG-VITACTHAG 595
           VF     R+ V+W+++I G+       +A  +FK M  Q L F   T I   + AC    
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLD 239

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            +  G+Q   ++     ++  +   + ++ +Y++AG++++A+ + + M
Sbjct: 240 HLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEM 286


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/567 (38%), Positives = 346/567 (61%), Gaps = 23/567 (4%)

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A ++ +    QLH  ++K+G+     +   L+  YSK     D+ + F    + K   +W
Sbjct: 26  ARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ-KSATTW 84

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF-----TYSIILTAQPAVSPFQVHAHII 405
           +++IS   QN    +++ F  +M    +RP+       T S  + ++  +    VH   +
Sbjct: 85  SSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGK-SVHCLSM 143

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           KT Y+    VG++L++ Y K G +  A K+F+ +  +++V WS M+ GYAQ+G+ E A+ 
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALW 203

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           ++++   E +  N+++FS+VI+ C A S  +E G+Q     IK+  +++  V S+LV++Y
Sbjct: 204 LFKEALFENLAVNDYSFSTVISVC-ANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLY 262

Query: 526 SKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
           SK G++E A +VF     R+L  WN+M+   AQH HT+K +E+FK M+   ++ + ITF+
Sbjct: 263 SKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFL 322

Query: 586 GVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
            V+ AC+HAGLVDEG+ YFD+M  E  I PT +HY+ +VD+  RAG LE+A++I+  MP 
Sbjct: 323 NVLNACSHAGLVDEGKYYFDLM-KESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPI 381

Query: 646 AASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARV 691
             + +VW  +L +C              ++  L P  S +++ LSN YAA G +++ A+ 
Sbjct: 382 DPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKA 441

Query: 692 RKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDT 751
           RKL+ DR  KKE G SW+E +NK ++F AG+  H +S +IY KL EL   ++ AGY  DT
Sbjct: 442 RKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADT 501

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKL 811
           SYVL+++D + K   +  HSERLAIAFGL+  PA  P++++KNLRVCGDCH  IK +S  
Sbjct: 502 SYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSIC 561

Query: 812 ERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            RR I+VRD NRFH F++G CSC DYW
Sbjct: 562 TRRVIIVRDNNRFHRFEDGKCSCNDYW 588



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 194/376 (51%), Gaps = 7/376 (1%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +   +Q+H  ++K+G  ++  V N LI+ Y KS++  D+R  F+    + + TW+S+++ 
Sbjct: 31  IVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISC 90

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           +  NEL   + E    M             S  K C       + + +H   +K G D D
Sbjct: 91  FAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDAD 150

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             + + L+  Y+KCG++  A K+F  M  +++VV+W+ M+ G+ Q G  + A+  F +  
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEM-PLRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209

Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
            E +  N +++S +++     +      Q+    IK++++ S  VG++L++ Y K G L+
Sbjct: 210 FENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLE 269

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
            A +VF+ +  +++  W+AML   AQ   T+  +++++++   G+KPN  TF +V+NAC+
Sbjct: 270 GAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-W 549
             +  V++GK +     ++++       ++LV M  + G +E A E+          S W
Sbjct: 330 H-AGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVW 388

Query: 550 NSMICGYAQHGHTKKA 565
            +++     H +T+ A
Sbjct: 389 GALLTSCTIHKNTELA 404



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 120/501 (23%), Positives = 220/501 (43%), Gaps = 67/501 (13%)

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
           V G Q+H   VKSG +    V+ +L++ Y ++    D RR F+D  + +  +W+S++S +
Sbjct: 32  VKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCF 91

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTV---LGVLADEGIVATAVQVHTMVIKNGGE 211
           A+N++    LE   +M    ++P+     +     G+L+   I      VH + +K G +
Sbjct: 92  AQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDI---GKSVHCLSMKTGYD 148

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V ++L+ MY K   +  AR +FD M  R+ +TW+ M+ GY     + EA   F   
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEA 208

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                 +   +F +VI +CA +  L L RQ+    +K+  D    + + L+  YSKCG +
Sbjct: 209 LFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDL 268

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E A ++F  +  M+++  W AM+    Q+      +  F +M   G++PN  T+      
Sbjct: 269 EGAYQVFDEV-PMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITF------ 321

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA----W 447
                                      +LNA    G++DE    F+L+ E  I      +
Sbjct: 322 -------------------------LNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHY 356

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT----APSAAVEQGKQFH 503
           ++++    + G  E A++I   +T+  + P E  + +++ +CT       AA    K F 
Sbjct: 357 ASLVDMLGRAGKLEEALEI---VTNMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFE 413

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL-----VSW-------NS 551
              + + ++       +L   Y+  G  E A++  K  R R       +SW       ++
Sbjct: 414 LGPVSSGMH------ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHT 467

Query: 552 MICGYAQHGHTKKALEVFKEM 572
              G  +H  +K+  E   E+
Sbjct: 468 FAAGERRHERSKEIYEKLAEL 488



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 189/418 (45%), Gaps = 35/418 (8%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           PF S++    F+ SPQ++   ++ ++  + ++ L   +L     +    L      L S 
Sbjct: 66  PFDSRR---AFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSA 122

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
            K+CG L     G+ VHC  +K+G+  DV V +SLVD+Y +   +   R++FD+M   NV
Sbjct: 123 TKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNV 182

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           V+W+ ++ GYA+   N+  L LF     E +  N ++FSTV+ V A+  ++    Q+  +
Sbjct: 183 VTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGL 242

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
            IK+  +  + V ++L+S+Y K   +  A  VFD +  R+   WN+M+     +    + 
Sbjct: 243 CIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKV 302

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            E F  M L+G +    TF++V+  C+    +   +     + ++ I+        L+  
Sbjct: 303 IELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDM 362

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
             + GK+E+A +I + M        W A+++    +   +LA                F 
Sbjct: 363 LGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELA---------------AFA 407

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
              +    P  S   +                 +L NAY   G  ++AAK  +L+ ++
Sbjct: 408 ADKVFELGPVSSGMHI-----------------SLSNAYAADGRFEDAAKARKLLRDR 448



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 68/156 (43%), Gaps = 1/156 (0%)

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
           +A S ++ +G Q H   +K+ L+    V++ L+  YSK      +   F+   ++   +W
Sbjct: 25  SARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTW 84

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
           +S+I  +AQ+     +LE  ++M    L  D         +C      D G+    + + 
Sbjct: 85  SSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMK 144

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPF 645
             +        S +VD+Y++ G +  A  + + MP 
Sbjct: 145 TGYDADVFVG-SSLVDMYAKCGEIVYARKMFDEMPL 179


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/757 (30%), Positives = 412/757 (54%), Gaps = 43/757 (5%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            F+  P R+ V +N +L  Y ++    +++ +F+ + R G    G T + +LK C CL D
Sbjct: 94  FFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLED 153

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H   V+ G   DV  +++L+D+Y +     +  RVF  + E N VSW+++++G
Sbjct: 154 TSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAG 213

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
             +N +    L+ F  MQ      +   +++VL   A    +    Q+H   +K+     
Sbjct: 214 CVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAAD 273

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  A + MY K   ++DA+ +FD  E+ +  ++N+M+ GY   E   +A   F+ +  
Sbjct: 274 GIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMS 333

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +G      +   V + CA  K L    Q++   +K+ +  D  +    +  Y KC  + +
Sbjct: 334 SGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAE 393

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A ++F  MR  +D VSW A+I+ H QNG     +  F  M R  + P+ FT+  +L A  
Sbjct: 394 AFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT 452

Query: 394 AVS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV--------------- 435
             S     ++H+ I+K+    + SVG +L++ Y K G+++EA K+               
Sbjct: 453 GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTME 512

Query: 436 -FELIDEKDI----VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
             E +  K +    V+W+++++GY     +E A  ++ ++   G+ P++FT+++V++ C 
Sbjct: 513 ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC- 571

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A  A+   GKQ HA  IK +L + + +SS LV MYSK G++  +  +F++  +RD V+WN
Sbjct: 572 ANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWN 631

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           +MICGYA HG  ++A+++F+ M  ++++ + +TFI ++ AC H GL+D+G +YF +M  +
Sbjct: 632 AMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRD 691

Query: 611 HHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR---------- 660
           + + P + HYS MVD+  ++G +++A+++I  MPF A   +WRT+L  C           
Sbjct: 692 YGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAE 751

Query: 661 -----LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                L+ L P DS+ Y LLSN+YA  G W++ + +R+ M   K+KKE G SW+E+K++ 
Sbjct: 752 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDEL 811

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLK---DAGYKP 749
           + FL GD +HP+  +IY +L  + + +K   D+ + P
Sbjct: 812 HVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFVP 848



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 270/547 (49%), Gaps = 28/547 (5%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RDV     +++ Y ++NN+      F+ M   +VVSW S+LSGY +N    + +E+F  M
Sbjct: 70  RDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDM 129

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
              G + +  TF+ +L V +     +  +Q+H +V++ G +      +AL+ MY K K  
Sbjct: 130 GRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRF 189

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            ++  VF G+ +++S++W++++AG V N L   A + F  M    A +++S + SV++ C
Sbjct: 190 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 249

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A   ELRL  QLH+  LK+    D  +RT  +  Y+KC  M+DA  +F     + +  S+
Sbjct: 250 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENL-NRQSY 308

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHIIK 406
            AMI+G+ Q      A+  F ++   G+  +  + S +  A   V       Q++   IK
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIK 368

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           ++      V  A ++ Y K   L EA +VF+ +  +D V+W+A++A + Q G     + +
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           +  +    ++P+EFTF SV+ ACT  S     G + H+  +K+ + +   V  +L+ MYS
Sbjct: 429 FVSMLRSRIEPDEFTFGSVLKACTGGSLGY--GMEIHSSIVKSGMASNSSVGCSLIDMYS 486

Query: 527 KKGNIESASEVFKRQRKRD--------------------LVSWNSMICGYAQHGHTKKAL 566
           K G IE A ++  R  +R                      VSWNS+I GY     ++ A 
Sbjct: 487 KCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +F  M    +  D  T+  V+  C +      G+Q     V +  +   +   S +VD+
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ-IHAQVIKKELQSDVYISSTLVDM 605

Query: 627 YSRAGML 633
           YS+ G L
Sbjct: 606 YSKCGDL 612



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 246/489 (50%), Gaps = 41/489 (8%)

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
           A +G +    Q H  +I +G    T V N L+ +Y  S+    A  VFD M  RD ++WN
Sbjct: 17  AKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWN 76

Query: 250 SMV-------------------------------AGYVTNELHMEAFETFNNMGLAGAEL 278
            M+                               +GY+ N   +++ E F +MG AG E 
Sbjct: 77  KMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEF 136

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              TF  ++K+C+  ++  L  Q+H  V++ G D D    + L+  Y+K  +  ++ ++F
Sbjct: 137 DGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 196

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             + E K+ VSW+A+I+G +QN  + LA+ FF +M +     +   Y+ +L +  A+S  
Sbjct: 197 QGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HAH +K+++     V TA L+ Y K   + +A  +F+  +  +  +++AM+ GY
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGY 315

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +Q      A+ ++ +L S G+  +E + S V  AC A    + +G Q +  +IK+ L+  
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC-ALVKGLSEGLQIYDLAIKSSLSLD 374

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           +CV++A + MY K   +  A  VF   R+RD VSWN++I  + Q+G   + L +F  M R
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-MVDLYSRAGML 633
             +E D  TF  V+ ACT  G +  G +    +V       +     C ++D+YS+ GM+
Sbjct: 435 SRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSIVKSG--MASNSSVGCSLIDMYSKCGMI 491

Query: 634 EKAMDIINR 642
           E+A  I +R
Sbjct: 492 EEAEKIHSR 500



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 190/408 (46%), Gaps = 47/408 (11%)

Query: 290 CATTKELRLARQLHS------------------QVLKNGIDF-------------DHNIR 318
           CA    L L +Q H+                  QV  N  DF             D    
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             ++  Y+K   M  AS  F+MM  ++DVVSW +M+SG+LQNG    ++  F  M R G 
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMM-PVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGT 134

Query: 379 RPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
             +G T++IIL     +       Q+H  +++   +      +ALL+ Y K     E+ +
Sbjct: 135 EFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VF+ I EK+ V+WSA++AG  Q      A+K ++++       ++  ++SV+ +C A S 
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS- 253

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +  G Q HA ++K+       V +A + MY+K  N++ A  +F +    +  S+N+MI 
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMIT 313

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY+Q  H  KAL +F  +    L FD I+  GV  AC     + EG Q +D+ +      
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIK----- 368

Query: 615 PTMEHYSCM----VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            ++    C+    +D+Y +   L +A  + + M     A  W  ++AA
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 33/200 (16%)

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A   A+E GKQ HA  I +       V + L+ +Y+   +  SAS VF R   RD+VSWN
Sbjct: 17  AKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWN 76

Query: 551 SMICGYA-------------------------------QHGHTKKALEVFKEMRRQDLEF 579
            MI GYA                               Q+G T K++EVF +M R   EF
Sbjct: 77  KMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEF 136

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           DG TF  ++  C+       G Q   ++V        +   S ++D+Y++     +++ +
Sbjct: 137 DGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAA-SALLDMYAKGKRFVESLRV 195

Query: 640 INRMPFAASATVWRTVLAAC 659
              +P   S + W  ++A C
Sbjct: 196 FQGIPEKNSVS-WSAIIAGC 214


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/674 (35%), Positives = 366/674 (54%), Gaps = 26/674 (3%)

Query: 187 GVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSI 246
            VL+   ++  AV  H +   +   + + +CN L++MY K  +   A+ V      R  +
Sbjct: 17  AVLSRSSLLGRAVHAHILRTHDT-PLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVV 75

Query: 247 TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQV 306
           TW S+++G V N     A   F+NM          TF  V K  A+       +QLH+  
Sbjct: 76  TWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALA 135

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           LK G   D  +       YSK G   +A  +F  M   +++ +W A +S  +Q+G    A
Sbjct: 136 LKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPH-RNLATWNAYMSNAVQDGRCLDA 194

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
           +  F +       PN  T+   L A   +       Q+H  I+++ Y +  SV   L++ 
Sbjct: 195 IAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDF 254

Query: 423 YVKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           Y K G +  +  VF  I    +++V+W ++LA   Q  + E A  ++ Q   E V+P +F
Sbjct: 255 YGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTDF 313

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
             SSV++AC A    +E G+  HA ++KA +   + V SALV +Y K G+IE A +VF+ 
Sbjct: 314 MISSVLSAC-AELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFRE 372

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD--LEFDGITFIGVITACTHAGLVD 598
             +R+LV+WN+MI GYA  G    AL +F+EM      +    +T + V++AC+ AG V+
Sbjct: 373 MPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVE 432

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G Q F+ M   + I P  EHY+C+VDL  R+G++++A + I RMP   + +VW  +L A
Sbjct: 433 RGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGA 492

Query: 659 CR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           C+              L  L P DS  +V+ SNM A+ G W+E   VRK M D  +KK  
Sbjct: 493 CKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNV 552

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           GYSW+ VKN+ + F A D  H ++++I + L +L   +K AGY PD +  L D+++E K 
Sbjct: 553 GYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKA 612

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
           + +  HSE++A+AFGL+  P G P++I KNLR+C DCH+ IK ISK+  R+I+VRD NRF
Sbjct: 613 SEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRF 672

Query: 825 HHFKEGLCSCGDYW 838
           H FK+G CSC DYW
Sbjct: 673 HRFKDGWCSCKDYW 686



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 250/505 (49%), Gaps = 18/505 (3%)

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVST----SLVDLYMRTN 127
           + +P   + L S L++       + GR VH   +++    D  + +     LV++Y + +
Sbjct: 1   MNVPRPPNLLGSFLESAVLSRSSLLGRAVHAHILRT---HDTPLPSFLCNHLVNMYSKLD 57

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
                + V    N   VV+WTSL+SG   N+     L  F  M+ E + PN FTF  V  
Sbjct: 58  LPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFK 117

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
             A   +  T  Q+H + +K G  +   V  +   MY K+ +  +AR +FD M  R+  T
Sbjct: 118 ASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLAT 177

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WN+ ++  V +   ++A   F        E    TF + +  CA    L L RQLH  ++
Sbjct: 178 WNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIV 237

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE-MKDVVSWTAMISGHLQNGAIDLA 366
           ++    D ++  GL+  Y KCG +  +  +FS +    ++VVSW ++++  +QN   + A
Sbjct: 238 RSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERA 297

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNA 422
              F Q  +E V P  F  S +L+A   +   +    VHA  +K   E++  VG+AL++ 
Sbjct: 298 CMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDL 356

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE--GVKPNEF 480
           Y K G ++ A +VF  + E+++V W+AM+ GYA +GD + A+ +++++TS   G+  +  
Sbjct: 357 YGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYV 416

Query: 481 TFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           T  SV++AC+  + AVE+G Q F +   +  +       + +V +  + G ++ A E  K
Sbjct: 417 TLVSVLSACSR-AGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIK 475

Query: 540 RQRKRDLVS-WNSMICGYAQHGHTK 563
           R      +S W +++     HG TK
Sbjct: 476 RMPILPTISVWGALLGACKMHGKTK 500



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 8/341 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD  P RN   +N  +    +D    +A+  F     +       T  + L  C  +
Sbjct: 164 RNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADI 223

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES--NVVSWTS 149
                GRQ+H   V+S +  DV+V   L+D Y +  ++     VF  +     NVVSW S
Sbjct: 224 VSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCS 283

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           LL+   +N   +R   +F + + E ++P  F  S+VL   A+ G +     VH + +K  
Sbjct: 284 LLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALALKAC 342

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV-TNELHMEAFETF 268
            E    V +AL+ +Y K   +  A  VF  M +R+ +TWN+M+ GY    ++ M A   F
Sbjct: 343 VEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDM-ALSLF 401

Query: 269 NNM--GLAGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGLMVAY 325
             M  G  G  L+  T VSV+  C+    +    Q+  S   + GI+        ++   
Sbjct: 402 QEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLL 461

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            + G ++ A +    M  +  +  W A++     +G   L 
Sbjct: 462 GRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLG 502


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/673 (34%), Positives = 367/673 (54%), Gaps = 56/673 (8%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA-EL 278
            I +Y  S  ++ AR +FD +   D  TW  +++    +   +EA + +N+       E 
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            +   +SV K CA+ +++  A+++H   ++ G   D  +   L+  Y KC   E A  +F
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPA 394
             M   +DV+SWT+M S ++  G +  A+  F +M   G RPN  T S IL A    +  
Sbjct: 137 EGM-PFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195

Query: 395 VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS------ 448
            S  +VH  +++     +  V +AL+N Y     + +A  VF+ +  +D V+W+      
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAY 255

Query: 449 -----------------------------AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
                                        A++ G  Q G TE A+++  ++ + G KPN+
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQ 315

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
            T +SV+ ACT   + +  GKQ H    +      L  ++ALV MY+K G++E +  VF 
Sbjct: 316 ITITSVLPACTNLES-LRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFS 374

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
              KRD VSWN+MI   + HG+ ++AL +F+EM    +  + +TF GV++ C+H+ LVDE
Sbjct: 375 MMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDE 434

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G   FD M  +H + P  +H+SCMVD+ SRAG LE+A + I +MP   +A  W  +L  C
Sbjct: 435 GLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGC 494

Query: 660 R--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
           R              L  ++  +   YVLLSN+  +   W E +  RKLM DR V K  G
Sbjct: 495 RVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPG 554

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            SWI+V+N+ ++F+ GD S+ QS++IY  L+ +  +++ AGY P+T +VLQD+D E KE 
Sbjct: 555 CSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEE 614

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
           +L  HSE+LA+AFG++     + +++ KNLR+CGDCH  IK ++K+    I+VRD+ RFH
Sbjct: 615 VLCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFH 674

Query: 826 HFKEGLCSCGDYW 838
           HF++GLCSC D+W
Sbjct: 675 HFRDGLCSCQDFW 687



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 224/482 (46%), Gaps = 40/482 (8%)

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
           +++   + +Y  + +++  R +FD + + ++ +WT L+S   ++  +   ++ ++  + +
Sbjct: 12  HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71

Query: 174 G-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
             ++P+     +V    A    V  A +VH   I+ G      + NALI MY K +    
Sbjct: 72  NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEG 131

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VF+GM  RD I+W SM + YV   L  EA   F  MGL G      T  S++  C  
Sbjct: 132 ARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTD 191

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM----------- 341
            K+L+  R++H  V++NG+  +  + + L+  Y+ C  +  A  +F  M           
Sbjct: 192 LKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVL 251

Query: 342 ------------------REMKDVV-----SWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
                             R M + V     SW A+I G +QNG  + A+    +M   G 
Sbjct: 252 ITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGF 311

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           +PN  T + +L A   +       Q+H +I +  + +  +  TAL+  Y K G L+ + +
Sbjct: 312 KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRR 371

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VF ++ ++D V+W+ M+   +  G+ E A+ ++R++   GV+PN  TF+ V++ C+    
Sbjct: 372 VFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRL 431

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV-SWNSMI 553
             E    F + S    +       S +V + S+ G +E A E  K+        +W +++
Sbjct: 432 VDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALL 491

Query: 554 CG 555
            G
Sbjct: 492 GG 493



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 225/502 (44%), Gaps = 46/502 (9%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKT 87
           ++ + LFD+ PQ +   +  L+    +     EA+  +   R    +      L SV K 
Sbjct: 28  QRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKA 87

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  L D +  ++VH + ++ GF  DV +  +L+D+Y +    E  R VF+ M   +V+SW
Sbjct: 88  CASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISW 147

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           TS+ S Y    +    L  F +M + G +PNS T S++L    D   + +  +VH  V++
Sbjct: 148 TSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVR 207

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE-------- 259
           NG      V +AL++MY     +R A+ VFD M  RD+++WN ++  Y  N+        
Sbjct: 208 NGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSV 267

Query: 260 ---------------------------LHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
                                         +A E  + M  +G +  + T  SV+  C  
Sbjct: 268 FGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTN 327

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
            + LR  +Q+H  + ++    D    T L+  Y+KCG +E + ++FSMM + +D VSW  
Sbjct: 328 LESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTK-RDTVSWNT 386

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS 412
           MI     +G  + A+  F +M   GVRPN  T++ +L+   + S       +I  +  + 
Sbjct: 387 MIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSG-CSHSRLVDEGLLIFDSMSRD 445

Query: 413 FSVG------TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE-GAV 464
            SV       + +++   + G L+EA +  + +  E    AW A+L G     + E G +
Sbjct: 446 HSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRI 505

Query: 465 KIYRQLTSEGVKPNEFTFSSVI 486
              R    E   P  +   S I
Sbjct: 506 AANRLFEIESDNPGNYVLLSNI 527


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 258/815 (31%), Positives = 429/815 (52%), Gaps = 68/815 (8%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDM 139
           S LK C  + D +  +  H    K G   DV+  T LV         E     + VF++ 
Sbjct: 37  SSLKNCKTI-DEL--KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93

Query: 140 NE-SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
                   + SL+ GYA + + +  + LF RM   GI P+ +TF   L   A        
Sbjct: 94  ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +Q+H +++K G      V N+L+  Y +   +  AR VFD M +R+ ++W SM+ GY   
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213

Query: 259 ELHMEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           +   +A + F  M +   E+T +  T V VI  CA  ++L    ++++ +  +GI+ +  
Sbjct: 214 DFAKDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           + + L+  Y KC  ++ A ++F       ++    AM S +++ G    A+  F  M   
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331

Query: 377 GVRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLN-------- 421
           GVRP+  +   +L+A  + S  +        H ++++  +E   ++  AL++        
Sbjct: 332 GVRPDRIS---MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388

Query: 422 -----------------------AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
                                   YV+ G +D A + FE + EK+IV+W+ +++G  Q  
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448

Query: 459 DTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
             E A++++  + S EGV  +  T  S+ +AC     A++  K  +    K  +   + +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASAC-GHLGALDLAKWIYYYIEKNGIQLDVRL 507

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            + LV M+S+ G+ ESA  +F     RD+ +W + I   A  G+ ++A+E+F +M  Q L
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + DG+ F+G +TAC+H GLV +G++ F  M+  H + P   HY CMVDL  RAG+LE+A+
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627

Query: 638 DIINRMPFAASATVWRTVLAACRLIS--------------LQPHDSAIYVLLSNMYAATG 683
            +I  MP   +  +W ++LAACR+                L P  +  YVLLSN+YA+ G
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W + A+VR  M ++ ++K  G S I+++ KT+ F +GD SHP+   I + L+E+S R  
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
             G+ PD S VL D+D++ K  +LS+HSE+LA+A+GL+++  G  ++IVKNLRVC DCH+
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             K  SK+  R+I++RD NRFH+ ++G CSCGD+W
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 262/559 (46%), Gaps = 41/559 (7%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           YN L+  Y    L  EA+ LFL +   G+     T    L  C        G Q+H   V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K G+A+D+ V  SLV  Y     ++  R+VFD+M+E NVVSWTS++ GYAR       ++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 166 LFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
           LF RM + E + PNS T   V+   A    + T  +V+  +  +G EV   + +AL+ MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
           +K   +  A+ +FD     +    N+M + YV   L  EA   FN M  +G    R + +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           S I  C+  + +   +  H  VL+NG +   NI   L+  Y KC + + A +IF  M   
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN- 400

Query: 345 KDVVSWTAMISGHLQNGAIDL-------------------------------AVNFFCQM 373
           K VV+W ++++G+++NG +D                                A+  FC M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460

Query: 374 -TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
            ++EGV  +G T   I +A   +        ++ +I K   +    +GT L++ + + G 
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
            + A  +F  +  +D+ AW+A +   A  G+ E A++++  +  +G+KP+   F   + A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQ-RKRDL 546
           C+     V+QGK+     +K    +   V    +V +  + G +E A ++ +    + + 
Sbjct: 581 CS-HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639

Query: 547 VSWNSMICGYAQHGHTKKA 565
           V WNS++      G+ + A
Sbjct: 640 VIWNSLLAACRVQGNVEMA 658



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 220/478 (46%), Gaps = 54/478 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGC 90
           + +FD   +RN V +  ++  Y R    ++A++LF   +R   +     T+  V+  C  
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G +V+     SG   +  + ++LVD+YM+ N ++  +R+FD+   SN+    ++
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            S Y R  +    L +F+ M   G++P+  +  + +   +    +      H  V++NG 
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E   ++CNALI MY+K      A  +FD M ++  +TWNS+VAGYV N     A+ETF  
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428

Query: 271 M-------------GLAGAELTRS-------------------TFVSVIKLCATTKELRL 298
           M             GL    L                      T +S+   C     L L
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
           A+ ++  + KNGI  D  + T L+  +S+CG  E A  IF+ +   +DV +WTA I    
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMA 547

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV--- 415
             G  + A+  F  M  +G++P+G  +   LTA         H  +++   E  +S+   
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS-------HGGLVQQGKEIFYSMLKL 600

Query: 416 -GTA--------LLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGA 463
            G +        +++   + G+L+EA ++ E +  E + V W+++LA     G+ E A
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/599 (39%), Positives = 344/599 (57%), Gaps = 30/599 (5%)

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A     ++  AG      +   +IKLC     +   R +H  V              L V
Sbjct: 50  ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109

Query: 324 A------YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN--GAIDLAVNFFCQMTR 375
           +      Y+K G ++DA ++F  M + ++VVSWT +++  L N  G    A+ F  +M R
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQ-RNVVSWTTVVAA-LANAPGRKKEALRFLVEMRR 167

Query: 376 EGVRPNGFTYSIILTA--QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           +GV  N +T+S +L A   P V    +HA IIK   +    V ++L++AY+K G LD   
Sbjct: 168 DGVAANSYTFSSVLGACGTPGVLA-AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGR 226

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            VF+ +   D+V W++++AG+AQ GD  GA++++ ++   G   N+ T +SV+ ACT   
Sbjct: 227 GVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTG-M 285

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             +E G+Q HA  +K   +  L + +AL+ MY K G +  A  +F R   RD++SW++MI
Sbjct: 286 VMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMI 343

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            G AQ+G + +AL+VF  M+ +    + IT +GV+ AC+HAGLV++G  YF  M     I
Sbjct: 344 SGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGI 403

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL------------ 661
            P  EH +CMVDL  RAG L++AM  I  M F   + +WRT+L ACR+            
Sbjct: 404 QPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAAT 463

Query: 662 --ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
             + L+P D    +LLSN+YA    W    +  K M D+ VKKE G SWIE+    + F+
Sbjct: 464 EILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFI 523

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
           AG++SHP S++I  +L  L  R KD GY P T +VLQD+  E KE +L  HSE+LAIAFG
Sbjct: 524 AGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFG 583

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            + +  G P++I+KNLR+CGDCH   KL+SK E + I++RD  RFHHF+ G+CSCGDYW
Sbjct: 584 TMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 173/346 (50%), Gaps = 15/346 (4%)

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDR-VLELFHRMQVE 173
           VS SLV +Y +   ++D   +F  M + NVVSWT++++  A      +  L     M+ +
Sbjct: 109 VSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRD 168

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G+  NS+TFS+VLG     G++A    +H  +IK G +    V ++LI  Y+K   +   
Sbjct: 169 GVAANSYTFSSVLGACGTPGVLAA---MHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSG 225

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R VFD M   D + WNS++AG+  +   + A E F  M  +G    + T  SV++ C   
Sbjct: 226 RGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGM 285

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L + RQ+H+ VLK   D D  +   L+  Y KCG + DA  +FS M + +DV+SW+ M
Sbjct: 286 VMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHD-RDVISWSTM 342

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF 413
           ISG  QNG    A+  F  M  EG  PN  T   +L A       +   H  ++  +K F
Sbjct: 343 ISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRS-MDKLF 401

Query: 414 SVG------TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLA 452
            +         +++   + G LDEA K + E+  E D V W  +L 
Sbjct: 402 GIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLG 447



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 157/324 (48%), Gaps = 7/324 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCR-DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           LF   PQRN V +  ++          +EAL   + +RR G+     T SSVL  CG   
Sbjct: 129 LFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGT-- 186

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
             V    +H + +K G   DV V +SL+D YM+  +++ GR VFD+M   ++V W S+++
Sbjct: 187 PGVLA-AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIA 245

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G+A++      +ELF RM+  G   N  T ++VL       ++    QVH  V+K   ++
Sbjct: 246 GFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDRDL 305

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
           +    NAL+ MY K   + DA A+F  M DRD I+W++M++G   N   +EA + F+ M 
Sbjct: 306 ILH--NALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMK 363

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKM 331
             G      T V V+  C+    +         + K  GI  +      ++    + GK+
Sbjct: 364 AEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKL 423

Query: 332 EDASKIFSMMREMKDVVSWTAMIS 355
           ++A K    M+   D V W  ++ 
Sbjct: 424 DEAMKFIGEMKFEPDSVIWRTLLG 447



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 112/224 (50%), Gaps = 4/224 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD     + V +N ++  + +      A+ LF+ ++  G      TL+SVL+ C  +
Sbjct: 226 RGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGM 285

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQVH   +K  + RD+ +  +L+D+Y +   + D   +F  M++ +V+SW++++
Sbjct: 286 VMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMI 343

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGG 210
           SG A+N  +   L++F  M+ EG  PN+ T   VL   +  G+V        +M    G 
Sbjct: 344 SGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGI 403

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           +     CN ++ +  ++  + +A      M+ + DS+ W +++ 
Sbjct: 404 QPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLG 447


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/637 (36%), Positives = 358/637 (56%), Gaps = 21/637 (3%)

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTF 182
           ++T ++ + R++FD M + + +SWT+++SGY         L LF +M VE G+  + F  
Sbjct: 12  VKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFIL 71

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           S  L        V+    +H   +K        V +AL+ MY+K   V +   VF  M  
Sbjct: 72  SLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPL 131

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           R+ ++W +++AG V    + EA   F++M +        TF S +K CA +  L   R++
Sbjct: 132 RNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREI 191

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H Q LK G      +   L   Y+KCGK++   ++F  M + +DVVSWT +I  ++Q G 
Sbjct: 192 HCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQ-RDVVSWTTIIMSNVQIGQ 250

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
            + AV  F +M    V PN FT++ +++    +       Q+HAH+I+     S SV  +
Sbjct: 251 EENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANS 310

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           ++  Y K   LD A+ VF+ +  +DI++WS M++GYAQ G  E A      +  EG +PN
Sbjct: 311 IMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPN 370

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           EF F+SV++ C    A +EQGKQ HA  +   L     V SAL+ MYSK G+I+ AS++F
Sbjct: 371 EFAFASVLSVC-GNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIF 429

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
                 ++VSW +MI GYA+HG++++A+++FK++ +  L  D +TFI V+ AC+HAGLVD
Sbjct: 430 DEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVD 489

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            G  YF+ +   H I P+ +HY CM+DL  RAG L  A  +I  MPF     VW T+L A
Sbjct: 490 LGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRA 549

Query: 659 CR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           CR              ++ L P+ +  ++ L+NMYAA G W+E A VRK+M  + V KE 
Sbjct: 550 CRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEP 609

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
           G+SWI+ K++  +F++GD SHP+   IY  L+ L+++
Sbjct: 610 GWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQ 646



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 163/539 (30%), Positives = 285/539 (52%), Gaps = 15/539 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVLKTCGC 90
           + LFD+  QR+ + +  ++  Y       EAL+LF  +    GL +    LS  LK CG 
Sbjct: 21  RQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGL 80

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                FG  +H   VK+ F   V V ++LVD+YM+   V++G  VF +M   NVVSWT++
Sbjct: 81  NMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAI 140

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++G  R   N   L  F  M ++ +  +++TFS+ L   AD G +    ++H   +K G 
Sbjct: 141 IAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGF 200

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
             V+ V N L +MY K   +     +F+ M  RD ++W +++   V       A + F  
Sbjct: 201 TAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRR 260

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M          TF +VI  CAT   +    QLH+ V++ G+    ++   +M  YSKC +
Sbjct: 261 MRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQ 320

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++ AS +F  +   +D++SW+ MISG+ Q G  + A ++   M REG RPN F ++ +L+
Sbjct: 321 LDLASTVFQGLSR-RDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLS 379

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
               ++      Q+HAH++    E++  V +AL+N Y K G + EA+K+F+  +  +IV+
Sbjct: 380 VCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVS 439

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+AM+ GYA+ G ++ A+ ++++L   G++P+  TF +V+ AC+  +  V+ G  FH  +
Sbjct: 440 WTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACS-HAGLVDLG--FHYFN 496

Query: 507 IKAKLNNALCVS----SALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
             +K++  +C S      ++ +  + G +  A  + +    +RD V W++++     HG
Sbjct: 497 SLSKVHQ-ICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHG 554



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 233/439 (53%), Gaps = 20/439 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL-AGA 276
           N ++   +K+  + +AR +FD M  RD I+W ++++GYV      EA   F+ M +  G 
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKMEDA 334
            +        +K C     +     LH   +K   DF +++  G  L+  Y K GK+++ 
Sbjct: 65  HMDPFILSLALKACGLNMSVSFGESLHGYSVKT--DFVNSVFVGSALVDMYMKIGKVDEG 122

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             +F  M  +++VVSWTA+I+G ++ G    A+ +F  M  + V  + +T+S  L A   
Sbjct: 123 CIVFKEM-PLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACAD 181

Query: 395 VSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
                   ++H   +K  +     V   L   Y K G LD   ++FE + ++D+V+W+ +
Sbjct: 182 SGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTI 241

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +    QIG  E AVK +R++    V PNEFTF++VI+ C A    +E G+Q HA  I+  
Sbjct: 242 IMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGC-ATLGRIEWGEQLHAHVIRRG 300

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L ++L V+++++ MYSK   ++ AS VF+   +RD++SW++MI GYAQ G  ++A +   
Sbjct: 301 LVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLS 360

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSCMVDL 626
            MRR+    +   F  V++ C +  ++++G+Q     ++ H +   +E      S ++++
Sbjct: 361 WMRREGPRPNEFAFASVLSVCGNMAILEQGKQ-----LHAHVLCVGLEQNTMVQSALINM 415

Query: 627 YSRAGMLEKAMDIINRMPF 645
           YS+ G +++A  I +   +
Sbjct: 416 YSKCGSIKEASKIFDEAEY 434



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 272/567 (47%), Gaps = 56/567 (9%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSVLKTCGCL 91
           +F   P RN V +  ++    R   ++EAL  F  + I+++G   +  T SS LK C   
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTY--TFSSALKACADS 182

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +GR++HC+ +K GF     V+ +L  +Y +   ++ G R+F+ M + +VVSWT+++
Sbjct: 183 GALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTII 242

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
               +    +  ++ F RM+   + PN FTF+ V+   A  G +    Q+H  VI+ G  
Sbjct: 243 MSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLV 302

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              SV N++++MY K   +  A  VF G+  RD I+W++M++GY       EAF+  + M
Sbjct: 303 DSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWM 362

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G       F SV+ +C     L   +QLH+ VL  G++ +  +++ L+  YSKCG +
Sbjct: 363 RREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSI 422

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           ++ASKIF    E  ++VSWTAMI+G+ ++G    A++ F ++ + G+RP+  T+  +L A
Sbjct: 423 KEASKIFD-EAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAA 481

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA-M 450
                    HA ++   +                    +  +KV ++   KD       +
Sbjct: 482 CS-------HAGLVDLGFH-----------------YFNSLSKVHQICPSKDHYGCMIDL 517

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           L    ++ D E  ++      S   + ++  +S+++ AC      V+ GK+     ++  
Sbjct: 518 LCRAGRLNDAESMIQ------SMPFQRDDVVWSTLLRACRI-HGDVDCGKRAAEKILQLD 570

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV-----SW-------NSMICGYAQ 558
            N A+     L  MY+ KG  + A+EV K  + + +V     SW       ++ + G   
Sbjct: 571 PNCAV-THITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRS 629

Query: 559 HGHTKKALEVFK------EMRRQDLEF 579
           H   +   +V        EM  Q+++F
Sbjct: 630 HPEGEYIYDVLDLLASQAEMHMQEMDF 656


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/643 (34%), Positives = 373/643 (58%), Gaps = 42/643 (6%)

Query: 236 VFDGMEDRDSITWNSMVA--------------GYVTNELHMEAFETFNNMGLAGAELTRS 281
           VF+    R ++ WNS+V+               +   +L  + F+ FN           S
Sbjct: 54  VFNQQLTRLAVPWNSIVSPVRCGTSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREAS 113

Query: 282 TFV-------SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
            F+       S++   ++   +     +H++V+K+    D  I   L+  Y K G  EDA
Sbjct: 114 QFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDA 173

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQP 393
            ++F  M   KD+VSW +++SG    G +   +N FC+M T  G +PN  T   +++A  
Sbjct: 174 QRLFDEMPN-KDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACA 232

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +        +H  ++K        V  +L+N Y K G LD A+++FE +  + +V+W++
Sbjct: 233 DMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNS 292

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           M+  +   G  E  + ++  +   G+ P++ T  +++ ACT  +    Q +  HA   + 
Sbjct: 293 MVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACT-DTGLGRQAESIHAYIHRC 351

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             N  + +++AL+ +Y+K G + ++ ++F+  + RD ++W +M+ GYA H   ++A+++F
Sbjct: 352 GFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLF 411

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             M ++ +E D +TF  +++AC+H+GLV+EG++YF+IM   + + P ++HYSCMVDL  R
Sbjct: 412 DLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR 471

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           +G LE A ++I  MP   S+ VW  +L ACR              L+SL P D   Y++L
Sbjct: 472 SGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIML 531

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN+Y+A G W++ ++VR LM +R++ +  G S+IE  NK + F+ GD  HP+S++I++KL
Sbjct: 532 SNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKL 591

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           EEL  ++++AG  P T +VL DID+E K  ++++HSE+LAIAFGL+ T +G PL I KNL
Sbjct: 592 EELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNL 651

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+CGDCH+  K  S LE+R I++RD+ RFHHF +GLCSC DYW
Sbjct: 652 RICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 216/470 (45%), Gaps = 49/470 (10%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H   +KS    D  +   LV +Y +    ED +R+FD+M   ++VSW SL+SG +    
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 160 NDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               L  F RM+ E G +PN  T  +V+   AD G +     +H +V+K G      V N
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +LI+MY K   +  A  +F+ M  R  ++WNSMV  +  N    +  + FN M  AG   
Sbjct: 261 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 320

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            ++T V++++ C  T   R A  +H+ + + G + D  I T L+  Y+K G++  +  IF
Sbjct: 321 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 380

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             +++ +D ++WTAM++G+  +     A+  F  M +EGV  +  T+             
Sbjct: 381 EEIKD-RDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF------------- 426

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-----EKDIVAWSAMLAG 453
                             T LL+A    G+++E  K FE++      E  +  +S M+  
Sbjct: 427 ------------------THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDL 468

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF--HACSIKAKL 511
             + G  E A   Y  + S  ++P+   + +++ AC      VE GK+      S+    
Sbjct: 469 LGRSGRLEDA---YELIKSMPMEPSSGVWGALLGACRV-YGNVELGKEVAEQLLSLDPSD 524

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
           +    +   L  +YS  G    AS+V    ++R L    +  C + +HG+
Sbjct: 525 HRNYIM---LSNIYSAAGLWRDASKVRALMKERRLT--RNPGCSFIEHGN 569



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 161/344 (46%), Gaps = 6/344 (1%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVL 85
           Y +  Q LFD  P ++ V +N L+            LN F  +R   G      TL SV+
Sbjct: 169 YDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 228

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C  +     G+ +H   VK G +    V  SL+++Y +   ++   ++F++M   ++V
Sbjct: 229 SACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 288

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW S++  +  N   ++ ++LF+ M+  GI P+  T   +L    D G+   A  +H  +
Sbjct: 289 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 348

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
            + G      +  AL+++Y K   +  +  +F+ ++DRD I W +M+AGY  +    EA 
Sbjct: 349 HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAI 408

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATT---KELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           + F+ M   G E+   TF  ++  C+ +   +E +   ++ S+V +     DH   + ++
Sbjct: 409 KLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH--YSCMV 466

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               + G++EDA ++   M        W A++      G ++L 
Sbjct: 467 DLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELG 510


>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g04780-like [Glycine max]
          Length = 632

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/578 (39%), Positives = 347/578 (60%), Gaps = 28/578 (4%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           +++LCA T      R  H+Q+++ G++ D    T L+  YSKC  +    K    M  +K
Sbjct: 56  LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEML-VK 114

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT----AQPAVSPFQVH 401
            ++     I    QN     A+    +M RE    N FT S +L         +   Q+H
Sbjct: 115 SLILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLH 174

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
           A  IK   + +  V TALL+ Y K   + +A+++FE + EK+ V WS+M+AGY Q G  +
Sbjct: 175 AFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHD 234

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+ ++      G   + F  SS ++AC   +  VE GKQ HA S K+   + + V+S+L
Sbjct: 235 EALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVE-GKQVHAMSHKSGFGSNIYVASSL 293

Query: 522 VTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
           + MY+K G I  A  VF+     R +V WN+MI G+A+H   ++A+ +F++M+++    D
Sbjct: 294 IDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPD 353

Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
            +T++ V+ AC+H GL +EGQ+YFD+MV +H++ P++ HYSCM+D+  RAG+++KA D+I
Sbjct: 354 DVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVQKAYDLI 413

Query: 641 NRMPFAASATVWRTVL-------AACR--------------LISLQPHDSAIYVLLSNMY 679
            RM F A++++W +V        A+CR              L  ++P+++  ++LL+N+Y
Sbjct: 414 GRMSFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAGNHILLANIY 473

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           AA     E AR RKL+ +  V+KE G SWIE+KNK +SF  G+ +HPQ +  Y+KL+ L 
Sbjct: 474 AANKKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDNYAKLDNLV 533

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             LK   YK DT+  L D+++  K  +L  HSE+LAI FGLV  P   P++I+KNLR+CG
Sbjct: 534 VELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIRIIKNLRICG 593

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           DCHT +KL+SK   R+I+VRDTNRFHHFK+GLCSCG++
Sbjct: 594 DCHTFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 159/313 (50%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           S L  +L+ C      + GR  H + ++ G   D+  ST L+++Y + + V   R+  D+
Sbjct: 51  SNLHYLLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDE 110

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M   +++   + +    +N  + + L+L  RMQ E    N FT S+VL   A +  +   
Sbjct: 111 MLVKSLILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILEC 170

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +Q+H   IK   +    V  AL+ +Y K   ++DA  +F+ M +++++TW+SM+AGYV N
Sbjct: 171 MQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 230

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
             H EA   F+N  L G +       S +  CA    L   +Q+H+   K+G   +  + 
Sbjct: 231 GFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVA 290

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           + L+  Y+KCG + +A  +F    E++ +V W AMISG  ++     A+  F +M + G 
Sbjct: 291 SSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGF 350

Query: 379 RPNGFTYSIILTA 391
            P+  TY  +L A
Sbjct: 351 FPDDVTYVSVLNA 363



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 124/235 (52%), Gaps = 5/235 (2%)

Query: 60  QEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF--GRQVHCECVKSGFARDVNVST 117
           ++AL L + ++R   P    T+SSVL  C C F        Q+H   +K+    +  V T
Sbjct: 133 RKALKLLIRMQREVTPFNEFTISSVL--CNCAFKCAILECMQLHAFSIKAAIDSNCFVXT 190

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +L+ +Y + ++++D  ++F+ M E N V+W+S+++GY +N  +D  L LFH  Q+ G   
Sbjct: 191 ALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQ 250

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           + F  S+ +   A    +    QVH M  K+G      V ++LI MY K   +R+A  VF
Sbjct: 251 DPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVF 310

Query: 238 DG-MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +G +E R  + WN+M++G+  + L  EA   F  M   G      T+VSV+  C+
Sbjct: 311 EGFVEVRSIVLWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACS 365



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 2/169 (1%)

Query: 28  SKKDQS-LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           S KD S +F+  P++N V ++ ++  Y ++  H EAL LF   + +G       +SS + 
Sbjct: 201 SIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVS 260

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVV 145
            C  L   V G+QVH    KSGF  ++ V++SL+D+Y +   + +   VF+   E  ++V
Sbjct: 261 ACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIV 320

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
            W +++SG+AR+ +    + LF +MQ  G  P+  T+ +VL   +  G+
Sbjct: 321 LWNAMISGFARHALAQEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGL 369


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/728 (32%), Positives = 393/728 (53%), Gaps = 68/728 (9%)

Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           R   + + R+ FD +    + SW S++SGY  N +     ++F  M              
Sbjct: 29  RIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEM-------------- 74

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
                 +  IV+                     N L+S Y+K++M+ +AR VF+ M +R+
Sbjct: 75  -----PERNIVS--------------------WNGLVSGYIKNRMIEEARNVFEIMPERN 109

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++W +MV GYV   + +EA   F  M     E    ++  +         +  AR+L+ 
Sbjct: 110 VVSWTAMVKGYVQEGMVVEAELLFWRM----PERNEVSWTVMFGGLIDGGRIDDARKLYD 165

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            +    +    N+  GL     + G++++A +IF  MRE ++V++WT MI+G+ QN  +D
Sbjct: 166 MMPGKDVVASTNMIGGL----CREGRVDEAREIFDEMRE-RNVITWTTMITGYGQNKRVD 220

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
           +A   F  M  +       +++ +L         +      +    K      A++ A  
Sbjct: 221 VARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALG 276

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           + G + +A +VF+ ++++D   W  M+  Y + G    A++++ Q+  +GV+P+  +  S
Sbjct: 277 EVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLIS 336

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           +++ C A  A+++ G+Q HA  ++ + +  + V+S L+TMY K G +  A  VF R   +
Sbjct: 337 ILSVC-ATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSK 395

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D++ WNS+I GYA HG  ++AL+VF EM       + +T I ++TAC++ G ++EG + F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIF 455

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR---- 660
           + M ++  + PT+EHYSC VD+  RAG ++KAM++IN M     ATVW  +L AC+    
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSR 515

Query: 661 ----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                     L  ++P ++  Y+LLS++ A+   W + A +RK M  + V K  G SWIE
Sbjct: 516 LDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIE 575

Query: 711 VKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
           V  K + F  G I +HP+   I   LE+    L++AGY PD S+VL D+D+E K   LS+
Sbjct: 576 VGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSERLA+A+GL+  P G P++++KNLRVCGDCH  IKLISK+  R+I++RD NRFHHF  
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695

Query: 830 GLCSCGDY 837
           G CSC DY
Sbjct: 696 GECSCRDY 703



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 223/461 (48%), Gaps = 36/461 (7%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R++     LV  Y++   +E+ R VF+ M E NVVSWT+++ GY +  M      LF RM
Sbjct: 77  RNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRM 136

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
                + N  +++ + G L D G +  A +++ M+   G +VV S    +I    +   V
Sbjct: 137 P----ERNEVSWTVMFGGLIDGGRIDDARKLYDMM--PGKDVVAS--TNMIGGLCREGRV 188

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            +AR +FD M +R+ ITW +M+ GY  N+    A + F  M     E T  ++ S++   
Sbjct: 189 DEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVM----PEKTEVSWTSMLLGY 244

Query: 291 ATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
             +  +  A +    + +K  I  +      ++VA  + G++  A ++F  M E +D  +
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACN-----AMIVALGEVGEIVKARRVFDQM-EDRDNAT 298

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           W  MI  + + G    A+  F QM R+GVRP+  +   IL+    ++      QVHAH++
Sbjct: 299 WRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           +  ++    V + L+  YVK G L +A  VF+    KDI+ W+++++GYA  G  E A+K
Sbjct: 359 RCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALK 418

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS------S 519
           ++ ++   G  PN+ T  +++ AC+        GK      I   + +  CV+      S
Sbjct: 419 VFHEMPLSGTMPNKVTLIAILTACSY------GGKLEEGLEIFESMESKFCVTPTVEHYS 472

Query: 520 ALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
             V M  + G ++ A E+      K D   W +++     H
Sbjct: 473 CTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTH 513



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 224/494 (45%), Gaps = 47/494 (9%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLF-----GSTLSS 83
           ++ + +FD  P+RN V +N L+  Y ++ + +EA N+F  +    +  +     G     
Sbjct: 65  REARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEG 124

Query: 84  VLKTCGCLFDHVFGR-QVHCECVKSGF-----------------ARDVNVSTSLVDLYMR 125
           ++     LF  +  R +V    +  G                   +DV  ST+++    R
Sbjct: 125 MVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCR 184

Query: 126 TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
              V++ R +FD+M E NV++WT++++GY +NK  D   +LF  M     +    +++++
Sbjct: 185 EGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMP----EKTEVSWTSM 240

Query: 186 LGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           L      G +  A +    M +K         CNA+I    +   +  AR VFD MEDRD
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMKP-----VIACNAMIVALGEVGEIVKARRVFDQMEDRD 295

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
           + TW  M+  Y      +EA E F  M   G   +  + +S++ +CAT   L+  RQ+H+
Sbjct: 296 NATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHA 355

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            +++   D D  + + LM  Y KCG++  A  +F      KD++ W ++ISG+  +G  +
Sbjct: 356 HLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPS-KDIIMWNSIISGYASHGLGE 414

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
            A+  F +M   G  PN  T   ILTA       +    I ++  E  F V   + +   
Sbjct: 415 EALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFES-MESKFCVTPTVEHYSC 473

Query: 425 KKGILDEAAKV---FELID----EKDIVAWSAMLAG---YAQIGDTEGAVKIYRQLTSEG 474
              +L  A KV    ELI+    + D   W A+L     ++++   E A K   ++  E 
Sbjct: 474 TVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPEN 533

Query: 475 VKPNEFTFSSVINA 488
             P  +   S INA
Sbjct: 534 AGP--YILLSSINA 545



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 14/144 (9%)

Query: 506 SIKAKLNNALCVSSAL-----VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           S+K  L+ A   S+ +     ++  S+ G I  A + F   R + + SWNS++ GY  +G
Sbjct: 3   SLKLILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANG 62

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             ++A ++F EM  +++    +++ G+++      +++E +  F+IM   + +      +
Sbjct: 63  LPREARQMFDEMPERNI----VSWNGLVSGYIKNRMIEEARNVFEIMPERNVV-----SW 113

Query: 621 SCMVDLYSRAGMLEKAMDIINRMP 644
           + MV  Y + GM+ +A  +  RMP
Sbjct: 114 TAMVKGYVQEGMVVEAELLFWRMP 137


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/583 (38%), Positives = 343/583 (58%), Gaps = 24/583 (4%)

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +GA   R T   ++   A   +L  AR+L  ++ +  +    NI  G    Y K G +  
Sbjct: 132 SGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNV-MSWNILFG---GYIKNGDLGG 187

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A K+F  M E ++V +W AM++G    G  + ++ FF  M REG+ P+ F    +     
Sbjct: 188 ARKLFDEMPE-RNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCA 246

Query: 392 --QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             +  V+  QVHA+++++  ++   VG++L + Y++ G L E   V  ++    IV+ + 
Sbjct: 247 GLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNT 306

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++AG  Q GD+EGA++ +  + S GV  +  TF S I++C+   AA+ QG+Q H   +KA
Sbjct: 307 IIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS-DLAALAQGQQIHGQVMKA 365

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            ++  + V + LV MYS+ G +  +  VF      D    ++MI  Y  HGH +KA+E+F
Sbjct: 366 GVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELF 425

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           K+M     E   +TF+ ++ AC+H+GL +EG   F++M   + + P+++HY+C+VDL  R
Sbjct: 426 KQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGR 485

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLL 675
           +G L++A  +I  MP      +W+T+L+AC              R+I L PHDSA YVLL
Sbjct: 486 SGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLL 545

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN+ A +  W + + VRK M D  V+KE G SW+E+K   + F  GD SHP+  +I   L
Sbjct: 546 SNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDECL 605

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           EE+  +++  GY PD S VL D++DE KE  LS HSE+LAIAF  ++ P G P++++KNL
Sbjct: 606 EEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMKNL 665

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           RVC DCH  IKL+S++  R+IVVRD +RFHHFK+G CSC DYW
Sbjct: 666 RVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 197/412 (47%), Gaps = 14/412 (3%)

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
           G   + FT + ++   AD G +  A ++   + +     V S  N L   Y+K+  +  A
Sbjct: 133 GAATDRFTANHLMLAYADLGDLTAARELFERIPRRN---VMSW-NILFGGYIKNGDLGGA 188

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R +FD M +R+  TWN+MVAG        E+   F +M   G         SV + CA  
Sbjct: 189 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 248

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           +++   RQ+H+ V+++G+D D  + + L   Y +CG +++   +  M+  +  +VS   +
Sbjct: 249 RDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLS-IVSCNTI 307

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           I+G  QNG  + A+ +FC M   GV  +  T+   +++   ++      Q+H  ++K   
Sbjct: 308 IAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGV 367

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +K   V T L++ Y + G L ++ +VF      D    SAM++ Y   G  + A+++++Q
Sbjct: 368 DKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQ 427

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           + + G +P++ TF +++ AC+      E    F   +    +  ++   + +V +  + G
Sbjct: 428 MMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSG 487

Query: 530 NIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
            ++ A   +       D V W +++        T+K  ++ + + ++ +E D
Sbjct: 488 CLDEAEALILSMPLTPDGVIWKTLLSAC----KTQKNFDMAERIAKRVIELD 535



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 23/347 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+RN   +N ++         +E+L  FL +RR G+      L SV + C  L
Sbjct: 189 RKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGL 248

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D V GRQVH   V+SG  RD+ V +SL  +YMR   +++G  V   +   ++VS  +++
Sbjct: 249 RDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTII 308

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G  +N  ++  LE F  M+  G+  +  TF + +   +D   +A   Q+H  V+K G +
Sbjct: 309 AGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVD 368

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V  V   L+ MY +   + D+  VF G    D+   ++M++ Y  +    +A E F  M
Sbjct: 369 KVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQM 428

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID-FDHNIRTGLM---VAYSK 327
              GAE +  TF++++  C+           HS + + G+D F+   +T  M   V +  
Sbjct: 429 MNGGAEPSDVTFLALLYACS-----------HSGLKEEGMDCFELMTKTYGMQPSVKHYT 477

Query: 328 C--------GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           C        G +++A  +   M    D V W  ++S        D+A
Sbjct: 478 CVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 524



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 165/351 (47%), Gaps = 13/351 (3%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R+V     L   Y++  ++   R++FD+M E NV +W ++++G      ++  L  F  M
Sbjct: 167 RNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDM 226

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           + EG+ P+ F   +V    A    V T  QVH  V+++G +    V ++L  MY++   +
Sbjct: 227 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCL 286

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           ++  AV   +     ++ N+++AG   N     A E F  M   G      TFVS I  C
Sbjct: 287 QEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSC 346

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           +    L   +Q+H QV+K G+D    + T L+  YS+CG + D+ ++F       D    
Sbjct: 347 SDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF-FGYCGSDTFLL 405

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAH 403
           +AMIS +  +G    A+  F QM   G  P+  T+  +L A       +  +  F++   
Sbjct: 406 SAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFEL--- 462

Query: 404 IIKT-NYEKSFSVGTALLNAYVKKGILDEA-AKVFELIDEKDIVAWSAMLA 452
           + KT   + S    T +++   + G LDEA A +  +    D V W  +L+
Sbjct: 463 MTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 513



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 38/283 (13%)

Query: 385 YSIILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +S +  A  A+ P  Q+HA    +           L+ AY   G L  A ++FE I  ++
Sbjct: 109 FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 168

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTS------------------------------- 472
           +++W+ +  GY + GD  GA K++ ++                                 
Sbjct: 169 VMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRR 228

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           EG+ P+EF   SV   C      V  G+Q HA  +++ L+  +CV S+L  MY + G ++
Sbjct: 229 EGMHPDEFGLGSVFRCCAGLRDVV-TGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQ 287

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT 592
               V +      +VS N++I G  Q+G ++ ALE F  MR   +  D +TF+  I++C+
Sbjct: 288 EGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCS 347

Query: 593 HAGLVDEGQQYFDIMVNE--HHIYPTMEHYSCMVDLYSRAGML 633
               + +GQQ    ++      + P M   +C+V +YSR G L
Sbjct: 348 DLAALAQGQQIHGQVMKAGVDKVVPVM---TCLVHMYSRCGCL 387


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 339/590 (57%), Gaps = 34/590 (5%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK---------- 330
           ++    +K CA      L   LH+  L++G   D      L+  Y K             
Sbjct: 59  TSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDG 118

Query: 331 ----MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
               +E   K+F  M E KDVVSW  ++ G  ++G    A+    +M R+G +P+ FT S
Sbjct: 119 SAVVLESVRKVFDEMPE-KDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLS 177

Query: 387 IILT----AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L             ++H    +  +     VG++L++ Y      D + KVF+ +  +
Sbjct: 178 SVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR 237

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D + W++MLAG AQ G  + A+ ++R++   G+KP   TFSS+I AC    A++  GKQ 
Sbjct: 238 DAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPAC-GNLASLLLGKQL 296

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           HA  I+   +  + +SS+L+ MY K GN+  A  +F R +  D+VSW +MI G+A HG  
Sbjct: 297 HAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPA 356

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
           ++AL +F  M   +L+ + ITF+ V+TAC+HAGLVD+G +YF+ M + + I P++EH++ 
Sbjct: 357 REALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAA 416

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHD 668
           + D   R G LE+A + I+ M    +A+VW T+L AC+              +  L+P  
Sbjct: 417 LADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRS 476

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
              +++LSN Y+++G W E A +RK M  + ++KE   SWIEVKNK + F+A D SHP  
Sbjct: 477 MGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWY 536

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            +I   L   S ++   GY P+T  V QDI++E K ++L  HSE+LAI FG+++TP G  
Sbjct: 537 ERIIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTT 596

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++++KNLRVC DCHTV K ISK+  R+IV+RD NRFHHFK+G+CSCGD+W
Sbjct: 597 IRVMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 220/490 (44%), Gaps = 62/490 (12%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN---------- 128
           ++L   LK+C  L     G  +H   ++SG   D   + +L++LY +             
Sbjct: 59  TSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDG 118

Query: 129 ----VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
               +E  R+VFD+M E +VVSW +L+ G A +  +   L L   M  +G KP+SFT S+
Sbjct: 119 SAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSS 178

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           VL + A+   V   +++H    +NG      V ++LI MY        +  VFD +  RD
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
           +I WNSM+AG   N    EA   F  M  +G +    TF S+I  C     L L +QLH+
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            V++ G D +  I + L+  Y KCG +  A +IF  ++   D+VSWTAMI GH  +G   
Sbjct: 299 YVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQS-PDIVSWTAMIMGHALHGPAR 357

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
            A+  F +M    ++PN  T+  +LTA         HA                      
Sbjct: 358 EALVLFDRMELGNLKPNHITFLAVLTACS-------HA---------------------- 388

Query: 425 KKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAV----KIYRQLTSEGVKPNE 479
             G++D+  K F  + D   IV     L  +A + DT G      + Y  ++   +KP  
Sbjct: 389 --GLVDKGWKYFNSMSDHYGIV---PSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTA 443

Query: 480 FTFSSVINACTAPSAAV---EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
             +S+++ AC      V   E  K+      ++  ++ +     L   YS  G    A+ 
Sbjct: 444 SVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHII-----LSNTYSSSGRWNEAAH 498

Query: 537 VFKRQRKRDL 546
           + K  RK+ +
Sbjct: 499 LRKSMRKKGM 508



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 208/486 (42%), Gaps = 35/486 (7%)

Query: 6   ALKSLINPQTKQPPKSLRSP------FYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLH 59
           A  +L+N   K P     SP         +  + +FD  P+++ V +N L+        H
Sbjct: 95  AANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRH 154

Query: 60  QEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSL 119
            EAL L   + R G      TLSSVL       D   G ++H    ++GF  DV V +SL
Sbjct: 155 GEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSL 214

Query: 120 VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
           +D+Y      +   +VFD++   + + W S+L+G A+N   D  L LF RM   GIKP  
Sbjct: 215 IDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMP 274

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            TFS+++    +   +    Q+H  VI+ G +    + ++LI MY K   V  AR +FD 
Sbjct: 275 VTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDR 334

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL-RL 298
           ++  D ++W +M+ G+  +    EA   F+ M L   +    TF++V+  C+    + + 
Sbjct: 335 IQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKG 394

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            +  +S     GI         L     + GK+E+A    S M+       W+ ++    
Sbjct: 395 WKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRA-- 452

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKS---FSV 415
                       C++ +  V        I       + P  + +HII +N   S   ++ 
Sbjct: 453 ------------CKVHKNTVLAEEVAKKIF-----DLEPRSMGSHIILSNTYSSSGRWNE 495

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKD--IVAWSAMLAGYAQIGDTEGAVKIY-RQLTS 472
              L  +  KKG+  E A  +  +  K    VA       Y +I D   A+ ++  Q+  
Sbjct: 496 AAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIID---ALNVFSEQMVR 552

Query: 473 EGVKPN 478
           +G  PN
Sbjct: 553 QGYVPN 558


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/734 (32%), Positives = 408/734 (55%), Gaps = 27/734 (3%)

Query: 33   SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
            +L  + P  + V +N ++  + +  L    L L+  +R  GL    ST +S+L     + 
Sbjct: 290  ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 349

Query: 93   DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              V G+Q+H   V  G   +V V +SL++LY +     D + VFD   E N+V W ++L+
Sbjct: 350  AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLT 409

Query: 153  GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            G+ +N++ +  + +F  M    ++ + FTF ++LG            QVH + IKN  ++
Sbjct: 410  GFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDI 469

Query: 213  VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
               V NA + MY K   + DA+A+F  +  +DSI+WN++  G   N    EA      M 
Sbjct: 470  SLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMR 529

Query: 273  LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            L G      +F + I  C+  +     +Q+H   +K GI  +H + + L+  YSK G +E
Sbjct: 530  LHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 589

Query: 333  DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
             + KIF+ + +   +V   A+I+G +QN   D A+  F Q+ ++G++P+  T+S IL+  
Sbjct: 590  SSRKIFAQV-DASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 648

Query: 392  ----QPAVSPFQVHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDI 444
                  A+   QVH + +K+   Y+ +  +G +L   Y+K  +L++A K+  E+ D K++
Sbjct: 649  SGSLNSAIGK-QVHCYTLKSGVLYDDTL-LGVSLAGIYLKSKMLEDANKLLTEMPDHKNL 706

Query: 445  VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
              W+A+++GYAQ G  + ++  + ++    V+ +E TF+SV+ AC+  +A  + GK+ H 
Sbjct: 707  FEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD-GKEIHG 765

Query: 505  CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTK 563
               K+   +    +SAL+ MYSK G++ S+ E FK  + K+D++ WNSMI G+A++G+  
Sbjct: 766  LITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYAD 825

Query: 564  KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            +AL +F++M    ++ D +TF+GV+ ACTH+GL+ EG+ +F  M   + + P ++HY+C 
Sbjct: 826  EALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACF 885

Query: 624  VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
            +DL  R G L++A + I+++PF     VW T LAACR              L+ L+P  S
Sbjct: 886  IDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYS 945

Query: 670  AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
            + YVLLS+++AATG+W E    R+ M ++ V K  G SWI V NKT  FL  D  HP + 
Sbjct: 946  STYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNL 1005

Query: 730  QIYSKLEELSTRLK 743
            +IY  L +L+  +K
Sbjct: 1006 RIYEMLGDLTGMMK 1019



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 290/582 (49%), Gaps = 41/582 (7%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L+ VL  C  +    +GRQVHC+ VKSGF+  V    +LVD+Y +  +V + RRVFD + 
Sbjct: 171 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 230

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + + W+S+++ Y R       L LF RM   G  P+  T  T++  LA  G       
Sbjct: 231 CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG------- 283

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
                                        +  A A+   M    ++ WN++++G+  + L
Sbjct: 284 ----------------------------RLDHATALLKKMPTPSTVAWNAVISGHAQSGL 315

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
                  + +M   G   TRSTF S++   A  K     +Q+H+  + +G+D +  + + 
Sbjct: 316 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 375

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG   DA  +F +  E K++V W AM++G +QN   + A+  F  M R  ++ 
Sbjct: 376 LINLYAKCGCPSDAKNVFDLSCE-KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQT 434

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + FT+  IL A   +S F    QVH   IK   + S  V  A L+ Y K G + +A  +F
Sbjct: 435 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 494

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            LI  KD ++W+A+  G AQ  + E AV + +++   G+ P++ +FS+ INAC+    A 
Sbjct: 495 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR-AT 553

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E GKQ H  +IK  + +   V S+L+ +YSK G++ES+ ++F +     +V  N++I G+
Sbjct: 554 ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 613

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
            Q+ +  +A+++F+++ +  L+   +TF  +++ C+ +     G+Q     +    +Y  
Sbjct: 614 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 673

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                 +  +Y ++ MLE A  ++  MP   +   W  +++ 
Sbjct: 674 TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 715



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 280/540 (51%), Gaps = 17/540 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD S ++N V +N +L  + ++ L +EA+ +F  + R  L     T  S+L  C  L
Sbjct: 390 KNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 449

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+QVHC  +K+     + V+ + +D+Y +   + D + +F  +   + +SW +L 
Sbjct: 450 SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALT 509

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A+N   +  + +  RM++ GI P+  +FST +   ++     T  Q+H + IK G  
Sbjct: 510 VGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGIC 569

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V ++LI +Y K   V  +R +F  ++    +  N+++AG+V N    EA + F  +
Sbjct: 570 SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQV 629

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYSKCGK 330
              G + +  TF S++  C+ +    + +Q+H   LK+G+ +D   +   L   Y K   
Sbjct: 630 LKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKM 689

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +EDA+K+ + M + K++  WTA+ISG+ QNG  D ++  F +M    VR +  T++ +L 
Sbjct: 690 LEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLK 749

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
           A   V+ F    ++H  I K+ +    +  +AL++ Y K G +  + + F EL +++DI+
Sbjct: 750 ACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIM 809

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W++M+ G+A+ G  + A+ +++++    +KP+E TF  V+ ACT  S  + +G+ F   
Sbjct: 810 PWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTH-SGLISEGRHFFGS 868

Query: 506 -----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQH 559
                 +  +L++  C     + +  + G+++ A E   +   R D V W + +     H
Sbjct: 869 MRKVYGLTPRLDHYAC----FIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 924



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 268/551 (48%), Gaps = 43/551 (7%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R +H   ++ G      +  SLV+LY ++  V           E    + +SLLS +AR+
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145

Query: 158 KMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                VL  F  ++   G +P+ F  + VL   +  G++A   QVH  V+K+G       
Sbjct: 146 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 205

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ MY K   V +AR VFDG+   D+I W+SM+A Y     + EA   F+ M   G+
Sbjct: 206 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 265

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
              + T V++I   A++                                   G+++ A+ 
Sbjct: 266 APDQVTLVTIISTLASS-----------------------------------GRLDHATA 290

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +   M      V+W A+ISGH Q+G     +  +  M   G+ P   T++ +L+A   + 
Sbjct: 291 LLKKM-PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 349

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            F    Q+HA  +    + +  VG++L+N Y K G   +A  VF+L  EK+IV W+AML 
Sbjct: 350 AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLT 409

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G+ Q    E A+++++ +    ++ +EFTF S++ ACT  S +   GKQ H  +IK  ++
Sbjct: 410 GFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS-SFYLGKQVHCVTIKNCMD 468

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +L V++A + MYSK G I  A  +F     +D +SWN++  G AQ+   ++A+ + K M
Sbjct: 469 ISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM 528

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R   +  D ++F   I AC++    + G+Q   + + ++ I       S ++DLYS+ G 
Sbjct: 529 RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI-KYGICSNHAVGSSLIDLYSKHGD 587

Query: 633 LEKAMDIINRM 643
           +E +  I  ++
Sbjct: 588 VESSRKIFAQV 598



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 4/331 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +  + +F +    + V  N L+  + +++   EA+ LF  + + GL     T SS+L  C
Sbjct: 589 ESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 648

Query: 89  GCLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVS 146
               +   G+QVHC  +KSG    D  +  SL  +Y+++  +ED  ++  +M +  N+  
Sbjct: 649 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 708

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WT+++SGYA+N   D  L  F RM+   ++ +  TF++VL   +D    A   ++H ++ 
Sbjct: 709 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 768

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAGYVTNELHMEAF 265
           K+G     +  +ALI MY K   V  +   F  ++++ D + WNSM+ G+  N    EA 
Sbjct: 769 KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 828

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVA 324
             F  M     +    TF+ V+  C  +  +   R     + K  G+    +     +  
Sbjct: 829 LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDL 888

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             + G +++A +    +    D V W   ++
Sbjct: 889 LGRGGHLQEAQEAIDQLPFRPDGVVWATYLA 919



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 1/176 (0%)

Query: 22  LRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           L+S      ++ L +    +N  E+  ++  Y ++     +L  F  +R   +    +T 
Sbjct: 685 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 744

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-N 140
           +SVLK C  +     G+++H    KSGF      +++L+D+Y +  +V      F ++ N
Sbjct: 745 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 804

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           + +++ W S++ G+A+N   D  L LF +M+   IKP+  TF  VL      G+++
Sbjct: 805 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLIS 860


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 207/570 (36%), Positives = 346/570 (60%), Gaps = 20/570 (3%)

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           ++LCA  K L + +  H   +  G+  D      L+  Y+KCG+ + A  +F +M  ++ 
Sbjct: 64  LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIM-HVRS 122

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHA 402
           +VSW  MI+G+  +G    A+  F +M REG   + FT S  + A  A        Q+H 
Sbjct: 123 IVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHT 182

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
             +K   + +  VGTA+L+ Y K  ++ +A  VFE + E+ +V WS++ AGY Q G  E 
Sbjct: 183 IALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEE 242

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ ++R    EGV+  EFT S++++AC + +  +E G Q HA  +K   +    V+++LV
Sbjct: 243 ALHLFRCAQREGVELTEFTLSAILSACASLALKIE-GIQLHAVILKCGFHGNFFVAASLV 301

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            +Y++ G IE A  +F     +++V WN+MI  +++H H+ +A+ +F++M++  +  + +
Sbjct: 302 DVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEV 361

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           T++ V++ C+HAGLV++G+ YF +++++  + P + HYSCMVD+  R+G  ++A +++N+
Sbjct: 362 TYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNK 421

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MPF  +A++W ++L +CR              L  L+P +   +VLLSN+YAA+G+W+  
Sbjct: 422 MPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENV 481

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
              RK + D   KKE G SWIE K K + F+ G+  HP+   IY+KLEE+   ++    +
Sbjct: 482 LMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFARR 541

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
                 L D+  E KE +L  HSE+LA++FGL++ P+  P+ I KNLR+CGDCH+ +K+ 
Sbjct: 542 TSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRICGDCHSFMKIA 601

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + +  R ++VRDTNRFHHFK+G CSCGD+W
Sbjct: 602 AHITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 163/312 (52%), Gaps = 1/312 (0%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           S +S  L+ C      + G+  H   +  G   D      L++LY +    +  R VFD 
Sbjct: 58  SAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDI 117

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M+  ++VSW ++++GY  +  + + L+LF RM  EG   + FT S+ +   A +  +   
Sbjct: 118 MHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINEC 177

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            Q+HT+ +K   +  + V  A++ +Y K  M++DA  VF+ M +R  +TW+S+ AGYV N
Sbjct: 178 KQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQN 237

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            LH EA   F      G ELT  T  +++  CA+        QLH+ +LK G   +  + 
Sbjct: 238 GLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVA 297

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y++CG++E A  +F+ M E K+VV W AMI+   ++     A+  F +M + G+
Sbjct: 298 ASLVDVYARCGQIEKAYALFAYM-EHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGI 356

Query: 379 RPNGFTYSIILT 390
            PN  TY  +L+
Sbjct: 357 FPNEVTYLSVLS 368



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 1/334 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD    R+ V +N ++  Y       +AL LF  + R G  +   TLSS +  C   + 
Sbjct: 114 VFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYA 173

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
               +Q+H   +K     +  V T+++D+Y + N ++D   VF+ M E  +V+W+SL +G
Sbjct: 174 INECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAG 233

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y +N +++  L LF   Q EG++   FT S +L   A   +    +Q+H +++K G    
Sbjct: 234 YVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGN 293

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V  +L+ +Y +   +  A A+F  ME ++ + WN+M+A +  +    EA   F  M  
Sbjct: 294 FFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQ 353

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKME 332
            G      T++SV+ +C+    +   R   S ++ +     + +    MV    + GK +
Sbjct: 354 LGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTD 413

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +A ++ + M        W +++        I LA
Sbjct: 414 EAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLA 447


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/734 (32%), Positives = 408/734 (55%), Gaps = 27/734 (3%)

Query: 33   SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
            +L  + P  + V +N ++  + +  L    L L+  +R  GL    ST +S+L     + 
Sbjct: 280  ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339

Query: 93   DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              V G+Q+H   V  G   +V V +SL++LY +     D + VFD   E N+V W ++L+
Sbjct: 340  AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLT 399

Query: 153  GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            G+ +N++ +  + +F  M    ++ + FTF ++LG            QVH + IKN  ++
Sbjct: 400  GFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDI 459

Query: 213  VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
               V NA + MY K   + DA+A+F  +  +DSI+WN++  G   N    EA      M 
Sbjct: 460  SLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMR 519

Query: 273  LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            L G      +F + I  C+  +     +Q+H   +K GI  +H + + L+  YSK G +E
Sbjct: 520  LHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 579

Query: 333  DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
             + KIF+ + +   +V   A+I+G +QN   D A+  F Q+ ++G++P+  T+S IL+  
Sbjct: 580  SSRKIFAQV-DASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 638

Query: 392  ----QPAVSPFQVHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDI 444
                  A+   QVH + +K+   Y+ +  +G +L   Y+K  +L++A K+  E+ D K++
Sbjct: 639  SGSLNSAIGK-QVHCYTLKSGVLYDDTL-LGVSLAGIYLKSKMLEDANKLLTEMPDHKNL 696

Query: 445  VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
              W+A+++GYAQ G  + ++  + ++    V+ +E TF+SV+ AC+  +A  + GK+ H 
Sbjct: 697  FEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD-GKEIHG 755

Query: 505  CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTK 563
               K+   +    +SAL+ MYSK G++ S+ E FK  + K+D++ WNSMI G+A++G+  
Sbjct: 756  LITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYAD 815

Query: 564  KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            +AL +F++M    ++ D +TF+GV+ ACTH+GL+ EG+ +F  M   + + P ++HY+C 
Sbjct: 816  EALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACF 875

Query: 624  VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
            +DL  R G L++A + I+++PF     VW T LAACR              L+ L+P  S
Sbjct: 876  IDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYS 935

Query: 670  AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
            + YVLLS+++AATG+W E    R+ M ++ V K  G SWI V NKT  FL  D  HP + 
Sbjct: 936  STYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNL 995

Query: 730  QIYSKLEELSTRLK 743
            +IY  L +L+  +K
Sbjct: 996  RIYEMLGDLTGMMK 1009



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 290/582 (49%), Gaps = 41/582 (7%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L+ VL  C  +    +GRQVHC+ VKSGF+  V    +LVD+Y +  +V + RRVFD + 
Sbjct: 161 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 220

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + + W+S+++ Y R       L LF RM   G  P+  T  T++  LA  G       
Sbjct: 221 CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG------- 273

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
                                        +  A A+   M    ++ WN++++G+  + L
Sbjct: 274 ----------------------------RLDHATALLKKMPTPSTVAWNAVISGHAQSGL 305

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
                  + +M   G   TRSTF S++   A  K     +Q+H+  + +G+D +  + + 
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG   DA  +F +  E K++V W AM++G +QN   + A+  F  M R  ++ 
Sbjct: 366 LINLYAKCGCPSDAKNVFDLSCE-KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQT 424

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + FT+  IL A   +S F    QVH   IK   + S  V  A L+ Y K G + +A  +F
Sbjct: 425 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 484

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            LI  KD ++W+A+  G AQ  + E AV + +++   G+ P++ +FS+ INAC+    A 
Sbjct: 485 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR-AT 543

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E GKQ H  +IK  + +   V S+L+ +YSK G++ES+ ++F +     +V  N++I G+
Sbjct: 544 ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 603

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
            Q+ +  +A+++F+++ +  L+   +TF  +++ C+ +     G+Q     +    +Y  
Sbjct: 604 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 663

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                 +  +Y ++ MLE A  ++  MP   +   W  +++ 
Sbjct: 664 TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 279/558 (50%), Gaps = 11/558 (1%)

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K G A D     +++     +  ++    +   M   + V+W +++SG+A++ +   VL 
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLG 311

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L+  M+  G+ P   TF+++L   A+        Q+H   + +G +    V ++LI++Y 
Sbjct: 312 LYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYA 371

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K     DA+ VFD   +++ + WN+M+ G+V NEL  EA   F  M     +    TFVS
Sbjct: 372 KCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVS 431

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++  C       L +Q+H   +KN +D    +    +  YSK G + DA  +FS++   K
Sbjct: 432 ILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI-PYK 490

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVH 401
           D +SW A+  G  QN   + AV    +M   G+ P+  ++S  + A   +    +  Q+H
Sbjct: 491 DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIH 550

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
              IK     + +VG++L++ Y K G ++ + K+F  +D   IV  +A++AG+ Q  + +
Sbjct: 551 CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED 610

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK-LNNALCVSSA 520
            A+++++Q+  +G+KP+  TFSS+++ C+  S     GKQ H  ++K+  L +   +  +
Sbjct: 611 EAIQLFQQVLKDGLKPSSVTFSSILSGCSG-SLNSAIGKQVHCYTLKSGVLYDDTLLGVS 669

Query: 521 LVTMYSKKGNIESASEVFKRQRK-RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           L  +Y K   +E A+++       ++L  W ++I GYAQ+G+   +L  F  MR  ++  
Sbjct: 670 LAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRS 729

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNE-HHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
           D  TF  V+ AC+      +G++   ++       Y T    S ++D+YS+ G +  + +
Sbjct: 730 DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETAT--SALIDMYSKCGDVISSFE 787

Query: 639 IINRMPFAASATVWRTVL 656
               +        W +++
Sbjct: 788 AFKELKNKQDIMPWNSMI 805



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 280/540 (51%), Gaps = 17/540 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD S ++N V +N +L  + ++ L +EA+ +F  + R  L     T  S+L  C  L
Sbjct: 380 KNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 439

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+QVHC  +K+     + V+ + +D+Y +   + D + +F  +   + +SW +L 
Sbjct: 440 SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALT 499

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A+N   +  + +  RM++ GI P+  +FST +   ++     T  Q+H + IK G  
Sbjct: 500 VGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGIC 559

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V ++LI +Y K   V  +R +F  ++    +  N+++AG+V N    EA + F  +
Sbjct: 560 SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQV 619

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYSKCGK 330
              G + +  TF S++  C+ +    + +Q+H   LK+G+ +D   +   L   Y K   
Sbjct: 620 LKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKM 679

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +EDA+K+ + M + K++  WTA+ISG+ QNG  D ++  F +M    VR +  T++ +L 
Sbjct: 680 LEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLK 739

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
           A   V+ F    ++H  I K+ +    +  +AL++ Y K G +  + + F EL +++DI+
Sbjct: 740 ACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIM 799

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W++M+ G+A+ G  + A+ +++++    +KP+E TF  V+ ACT  S  + +G+ F   
Sbjct: 800 PWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTH-SGLISEGRHFFGP 858

Query: 506 -----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQH 559
                 +  +L++  C     + +  + G+++ A E   +   R D V W + +     H
Sbjct: 859 MRKVYGLTPRLDHYAC----FIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 914



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 268/551 (48%), Gaps = 43/551 (7%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R +H   ++ G      +  SLV+LY ++  V           E    + +SLLS +AR+
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 158 KMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                VL  F  ++   G +P+ F  + VL   +  G++A   QVH  V+K+G       
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ MY K   V +AR VFDG+   D+I W+SM+A Y     + EA   F+ M   G+
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
              + T V++I   A++                                   G+++ A+ 
Sbjct: 256 APDQVTLVTIISTLASS-----------------------------------GRLDHATA 280

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +   M      V+W A+ISGH Q+G     +  +  M   G+ P   T++ +L+A   + 
Sbjct: 281 LLKKM-PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            F    Q+HA  +    + +  VG++L+N Y K G   +A  VF+L  EK+IV W+AML 
Sbjct: 340 AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLT 399

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G+ Q    E A+++++ +    ++ +EFTF S++ ACT  S +   GKQ H  +IK  ++
Sbjct: 400 GFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS-SFYLGKQVHCVTIKNCMD 458

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +L V++A + MYSK G I  A  +F     +D +SWN++  G AQ+   ++A+ + K M
Sbjct: 459 ISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM 518

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R   +  D ++F   I AC++    + G+Q   + + ++ I       S ++DLYS+ G 
Sbjct: 519 RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI-KYGICSNHAVGSSLIDLYSKHGD 577

Query: 633 LEKAMDIINRM 643
           +E +  I  ++
Sbjct: 578 VESSRKIFAQV 588



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 4/331 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +  + +F +    + V  N L+  + +++   EA+ LF  + + GL     T SS+L  C
Sbjct: 579 ESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 638

Query: 89  GCLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVS 146
               +   G+QVHC  +KSG    D  +  SL  +Y+++  +ED  ++  +M +  N+  
Sbjct: 639 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 698

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WT+++SGYA+N   D  L  F RM+   ++ +  TF++VL   +D    A   ++H ++ 
Sbjct: 699 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 758

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAGYVTNELHMEAF 265
           K+G     +  +ALI MY K   V  +   F  ++++ D + WNSM+ G+  N    EA 
Sbjct: 759 KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 818

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVA 324
             F  M     +    TF+ V+  C  +  +   R     + K  G+    +     +  
Sbjct: 819 LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDL 878

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             + G +++A +    +    D V W   ++
Sbjct: 879 LGRGGHLQEAQEAIDQLPFRPDGVVWATYLA 909



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 1/176 (0%)

Query: 22  LRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           L+S      ++ L +    +N  E+  ++  Y ++     +L  F  +R   +    +T 
Sbjct: 675 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 734

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-N 140
           +SVLK C  +     G+++H    KSGF      +++L+D+Y +  +V      F ++ N
Sbjct: 735 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 794

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           + +++ W S++ G+A+N   D  L LF +M+   IKP+  TF  VL      G+++
Sbjct: 795 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLIS 850


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/729 (33%), Positives = 401/729 (55%), Gaps = 33/729 (4%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           +N ++  + R+ L  +AL  +  +   G+    ST   ++K C  L  +  G     + V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL-KNFKGIDFLSDTV 164

Query: 106 KSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
            S    D N  V++SL+  Y+    ++   ++FD + + + V W  +L+GYA+    D V
Sbjct: 165 SS-LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           ++ F  M+++ I PN+ TF  VL V A + ++   VQ+H +V+ +G +   S+ N+L+SM
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K     DA  +F  M   D++TWN M++GYV + L  E+   F  M  +G      TF
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITF 343

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
            S++   +  + L   +Q+H  ++++ I  D  + + L+ AY KC  +  A  IFS    
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----- 398
           + DVV +TAMISG+L NG    ++  F  + +  + PN  T   IL   P +        
Sbjct: 404 V-DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL---PVIGILLALKL 459

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             ++H  IIK  ++   ++G A+++ Y K G ++ A ++FE + ++DIV+W++M+   AQ
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-APSAAVEQGKQFHACSIKAKLNNAL 515
             +   A+ I+RQ+   G+  +  + S+ ++AC   PS +   GK  H   IK  L + +
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF--GKAIHGFMIKHSLASDV 577

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM-RR 574
              S L+ MY+K GN+++A  VFK  +++++VSWNS+I     HG  K +L +F EM  +
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
             +  D ITF+ +I++C H G VDEG ++F  M  ++ I P  EHY+C+VDL+ RAG L 
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT 697

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A + +  MPF   A VW T+L ACR              L+ L P +S  YVL+SN +A
Sbjct: 698 EAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHA 757

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
               W+   +VR LM +R+V+K  GYSWIE+  +T+ F++GD++HP+S+ IYS L  L  
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817

Query: 741 RLKDAGYKP 749
            L+  GY P
Sbjct: 818 ELRLEGYIP 826



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 167/603 (27%), Positives = 308/603 (51%), Gaps = 33/603 (5%)

Query: 70  RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
           RRL L L   +  ++L+          G+QVH   + +  + D      ++ +Y    + 
Sbjct: 36  RRLSLLLQACSNPNLLRQ---------GKQVHAFLIVNSISGDSYTDERILGMYAMCGSF 86

Query: 130 EDGRRVFD--DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
            D  ++F   D+  S++  W S++S + RN + ++ L  + +M   G+ P+  TF  ++ 
Sbjct: 87  SDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVK 146

Query: 188 VLAD----EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
                   +GI   +  V ++    G +    V ++LI  YL+   +     +FD +  +
Sbjct: 147 ACVALKNFKGIDFLSDTVSSL----GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D + WN M+ GY          + F+ M +        TF  V+ +CA+   + L  QLH
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
             V+ +G+DF+ +I+  L+  YSKCG+ +DASK+F MM    D V+W  MISG++Q+G +
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR-ADTVTWNCMISGYVQSGLM 321

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFSVG 416
           + ++ FF +M   GV P+  T+S +L   P+VS F       Q+H +I++ +      + 
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLL---PSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           +AL++AY K   +  A  +F   +  D+V ++AM++GY   G    +++++R L    + 
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PNE T  S++        A++ G++ H   IK   +N   +  A++ MY+K G +  A E
Sbjct: 439 PNEITLVSILPV-IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F+R  KRD+VSWNSMI   AQ  +   A+++F++M    + +D ++    ++AC +   
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
              G+     M+ +H +   +   S ++D+Y++ G L+ AM++   M    +   W +++
Sbjct: 558 ESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSII 615

Query: 657 AAC 659
           AAC
Sbjct: 616 AAC 618



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 181/359 (50%), Gaps = 2/359 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF    + + V +N ++  Y +  L +E+L  F  +   G+     T SS+L +     +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             + +Q+HC  ++   + D+ ++++L+D Y +   V   + +F   N  +VV +T+++SG
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N +    LE+F  +    I PN  T  ++L V+     +    ++H  +IK G +  
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            ++  A+I MY K   +  A  +F+ +  RD ++WNSM+     ++    A + F  MG+
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           +G      +  + +  CA        + +H  ++K+ +  D    + L+  Y+KCG ++ 
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT-REGVRPNGFTYSIILTA 391
           A  +F  M+E K++VSW ++I+    +G +  ++  F +M  + G+RP+  T+  I+++
Sbjct: 596 AMNVFKTMKE-KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/337 (20%), Positives = 154/337 (45%), Gaps = 2/337 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q++F +    + V +  ++  Y  + L+ ++L +F  + ++ +     TL S+L   G L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR++H   +K GF    N+  +++D+Y +   +     +F+ +++ ++VSW S++
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +  A++      +++F +M V GI  +  + S  L   A+    +    +H  +IK+   
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLA 574

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                 + LI MY K   ++ A  VF  M++++ ++WNS++A    +    ++   F+ M
Sbjct: 575 SDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634

Query: 272 -GLAGAELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
              +G    + TF+ +I  C    ++    R   S     GI         ++  + + G
Sbjct: 635 VEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAG 694

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           ++ +A +    M    D   W  ++     +  ++LA
Sbjct: 695 RLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELA 731


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/758 (32%), Positives = 400/758 (52%), Gaps = 84/758 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---------------LGIRRLGLPLFG 78
           +FD  PQR+ V +N +LF Y        A  LF                 + R+G     
Sbjct: 99  VFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDR 158

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           +T + VLK+C  L DH  G Q+H   VK GF  DV   ++L+D+Y +     D  R    
Sbjct: 159 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLR---- 214

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
                                    LELF  MQ  G+                      A
Sbjct: 215 -----------------------GGLELFKEMQKAGV---------------------GA 230

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD-ARAVFDGMEDRDSITWNSMVAGYVT 257
           +Q+H   +K        +  A + MY+K   + D +  +F+ + + +  ++N+++ GY  
Sbjct: 231 LQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYAR 290

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           ++  +EA   F  +  +G  L   +     + CA  K      Q+H   +K+    +  +
Sbjct: 291 SDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICV 350

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              ++  Y KCG + +A  +F  M   +D VSW A+I+ H QNG  +  ++ F  M + G
Sbjct: 351 ANAILDMYGKCGALVEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSG 409

Query: 378 VRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           + P+ FTY  +L A    Q      ++H  IIK+       VG AL++ Y K G++++A 
Sbjct: 410 MEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAE 469

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           K+ + + E+ +V+W+A+++G++    +E A K + ++   GV P+ FT++++++ C A  
Sbjct: 470 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC-ANL 528

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             VE GKQ HA  IK +L +   +SS LV MYSK GN++    +F++   RD V+WN+M+
Sbjct: 529 VTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMV 588

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
           CGYAQHG  ++AL++F+ M+ ++++ +  TF+ V+ AC H GLV++G  YF  M++ + +
Sbjct: 589 CGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGL 648

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------------- 660
            P +EHYSC+VD+  R+G + KA+++I  MPF A A +WRT+L+ C+             
Sbjct: 649 DPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAY 708

Query: 661 -LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
            ++ L+P DSA YVLLSN+YA  G W E  ++RK+M    +KKE G SWIE+K++ ++FL
Sbjct: 709 SILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFL 768

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
            GD +HP+S +IY  L+ L+  +K  GY PDT ++L D
Sbjct: 769 VGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILND 806



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 228/499 (45%), Gaps = 68/499 (13%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TFS +    +D   +    Q H  +I    +    V N LI MY+K   +  A  VFDGM
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 241 EDRDSITWNSMVAGY-------VTNELH-------MEAFETFN-NMGLAGAELTRSTFVS 285
             RD+++WN+M+ GY       V  +L            E F+  MG  G    R+TF  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+K C++ ++     Q+H   +K G D D    + L+  Y+KC                 
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCC---------------- 207

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
                       +QN  +   +  F +M + G                 V   Q+H H +
Sbjct: 208 ------------VQNDDLRGGLELFKEMQKAG-----------------VGALQLHGHAL 238

Query: 406 KTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           KT++     +GTA L+ Y+K   + D + ++F  +   ++ +++A++ GYA+      A+
Sbjct: 239 KTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEAL 298

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++R L   G+  +E + S    AC      +E G Q H  S+K+   + +CV++A++ M
Sbjct: 299 GMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE-GLQVHGLSMKSLCQSNICVANAILDM 357

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y K G +  A  VF+    RD VSWN++I  + Q+G+ +K L +F  M +  +E D  T+
Sbjct: 358 YGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTY 417

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
             V+ AC     ++ G +  + ++       +    + ++D+YS+ GM+EKA  + +R+ 
Sbjct: 418 GSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIA-LIDMYSKCGMMEKAEKLHDRL- 475

Query: 645 FAASATV--WRTVLAACRL 661
             A  TV  W  +++   L
Sbjct: 476 --AEQTVVSWNAIISGFSL 492



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 118/227 (51%), Gaps = 2/227 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + L DR  ++  V +N ++  +      +EA   F  +  +G+     T +++L TC
Sbjct: 466 EKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC 525

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L     G+Q+H + +K     D  +S++LVD+Y +  N++D + +F+     + V+W 
Sbjct: 526 ANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWN 585

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIK 207
           +++ GYA++ + +  L++F  MQ+E +KPN  TF  VL      G+V   +   H+M+  
Sbjct: 586 AMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSN 645

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
            G +      + ++ +  +S  V  A  + +GM  + D++ W ++++
Sbjct: 646 YGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/732 (33%), Positives = 391/732 (53%), Gaps = 79/732 (10%)

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           +P SF  ST        G   +   +H    K G   + +  N L+++Y+KS  +  A  
Sbjct: 34  QPCSFLHST-----TSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHK 88

Query: 236 VFDGMEDRDSITWNSMVAGYV----TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +FD +  +++ TW  +++G+     ++EL    F  F  M   GA   + T  SV+K C+
Sbjct: 89  LFDEITHKNTQTWTILISGFARAAGSSEL---VFSLFREMQADGACPNQYTLSSVLKCCS 145

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
               ++  + +H+ +L+NG+  D  +   ++  Y KC + E A   F +M E KDVVSW 
Sbjct: 146 RENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIE-KDVVSWN 204

Query: 352 AMISGHLQNGAIDLAVNFF--------------------CQ-----------MTREGVRP 380
            MI  +L+ G ++ ++  F                    C            M   G   
Sbjct: 205 IMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEF 264

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           +  T+SI L    ++S      Q+H  ++         + ++L+  Y K G +D+A+ + 
Sbjct: 265 SPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTIL 324

Query: 437 ELID----------------EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
           + +                 +  +V+WS+M++GY   G  E  +K +R +  E +  +  
Sbjct: 325 KDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIR 384

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T +++I+AC A +  +E GKQ HA   K  L     V S+L+ MYSK G+++ A  +F++
Sbjct: 385 TVATIISAC-ANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQ 443

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
            ++ ++V W SMI G A HG  K+A+ +F+ M    +  + +TF+GV+ AC+H GL++EG
Sbjct: 444 IKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEG 503

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            +YF +M + +HI P +EHY+ MV+LY RAG L +A + I     +   +VWR+ L++CR
Sbjct: 504 CRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCR 563

Query: 661 L--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
           L              +   P D   Y+LLSNM ++   W E A VR LM  R VKK+ G 
Sbjct: 564 LHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQ 623

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SW+++K++ +SF  GD SHPQ  +IYS L+ L  RLK+ GY  D   V+QD+++E  E +
Sbjct: 624 SWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVL 683

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           +S HSE+LA+ F ++ T    P++I+KNLR+C DCH   K  S+L  R+I+VRDT+RFHH
Sbjct: 684 ISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHH 743

Query: 827 FKEGLCSCGDYW 838
           FK+  CSCG+YW
Sbjct: 744 FKQSSCSCGEYW 755



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 266/557 (47%), Gaps = 57/557 (10%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R +H    K G  + +N +  L+ LY++++N++   ++FD++   N  +WT L+SG+AR 
Sbjct: 52  RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111

Query: 158 K-MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN--GGEVVT 214
              ++ V  LF  MQ +G  PN +T S+VL   + E  +     +H  +++N  GG+VV 
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVL 171

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN---ELHMEAFETFNN- 270
              N+++ +YLK K    A + F+ M ++D ++WN M+  Y+     E  +E F  F N 
Sbjct: 172 E--NSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNK 229

Query: 271 ---------------------------MGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
                                      M   G E +  TF   + L ++   + + RQLH
Sbjct: 230 DVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLH 289

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS--------------MMREMK-DVV 348
            +VL  G++ D  IR+ L+  Y KCG+M+ AS I                  +E K  +V
Sbjct: 290 GRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMV 349

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT--AQPAVSPF--QVHAHI 404
           SW++M+SG++ NG  +  +  F  M  E +  +  T + I++  A   +  F  Q+HA+I
Sbjct: 350 SWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYI 409

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
            K        VG++L++ Y K G LD+A  +FE I E ++V W++M++G A  G  + A+
Sbjct: 410 QKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAI 469

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++  + + G+ PNE TF  V+NAC+      E  + F        +N  +   +++V +
Sbjct: 470 SLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNL 529

Query: 525 YSKKGN-IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           Y + G+ IE+ + +F+         W S +     H +      V  EM  Q    D   
Sbjct: 530 YGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSV-SEMLLQSAPSDPDA 588

Query: 584 FIGVITACTHAGLVDEG 600
           +I +   C+     DE 
Sbjct: 589 YILLSNMCSSNHQWDEA 605



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 207/473 (43%), Gaps = 55/473 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQE-ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           LFD    +N   +  L+  + R +   E   +LF  ++  G      TLSSVLK C    
Sbjct: 89  LFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSREN 148

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYM---------------------------- 124
           +  FG+ +H   +++G   DV +  S++DLY+                            
Sbjct: 149 NIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIG 208

Query: 125 ---RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
              R  +VE    +F +    +VVSW +++ G  +       LE  + M   G + +  T
Sbjct: 209 AYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVT 268

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD--- 238
           FS  L +++   +V    Q+H  V+  G      + ++L+ MY K   +  A  +     
Sbjct: 269 FSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVP 328

Query: 239 ---------GMEDRDS----ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
                    G+  ++     ++W+SMV+GYV N  + +  +TF +M      +   T  +
Sbjct: 329 LNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVAT 388

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           +I  CA    L   +Q+H+ + K G+  D  + + L+  YSK G ++DA  IF  ++E  
Sbjct: 389 IISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE-P 447

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV---HA 402
           +VV WT+MISG   +G    A++ F  M   G+ PN  T+  +L A   V   +    + 
Sbjct: 448 NVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYF 507

Query: 403 HIIKTNYEKSFSVG--TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLA 452
            ++K  Y  +  V   T+++N Y + G L EA   +FE         W + L+
Sbjct: 508 RMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 122/279 (43%), Gaps = 16/279 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K   +F   P ++ V +N ++    +    + AL     +   G      T S  L   
Sbjct: 217 EKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILV 276

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-------- 140
             L     GRQ+H   +  G   D  + +SLV++Y +   ++    +  D+         
Sbjct: 277 SSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGN 336

Query: 141 --------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
                   ++ +VSW+S++SGY  N   +  ++ F  M  E I  +  T +T++   A+ 
Sbjct: 337 FGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANA 396

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           GI+    Q+H  + K G  +   V ++LI MY KS  + DA  +F+ +++ + + W SM+
Sbjct: 397 GILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMI 456

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           +G   +    EA   F  M   G      TFV V+  C+
Sbjct: 457 SGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACS 495



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 136/291 (46%), Gaps = 9/291 (3%)

Query: 26  FYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVL 85
           F  K +  +  + P+   V ++ ++  Y  +  +++ +  F  +    + +   T+++++
Sbjct: 331 FLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATII 390

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C       FG+Q+H    K G   D  V +SL+D+Y ++ +++D   +F+ + E NVV
Sbjct: 391 SACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVV 450

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
            WTS++SG A +      + LF  M   GI PN  TF  VL   +  G++    +   M 
Sbjct: 451 LWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRM- 509

Query: 206 IKNGGEVVTSV--CNALISMYLKSKMVRDARA-VFDGMEDRDSITWNSMVAGYVTNELH- 261
           +K+   +   V    +++++Y ++  + +A+  +F+      +  W S ++   +  LH 
Sbjct: 510 MKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS---SCRLHK 566

Query: 262 -MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
                ++ + M L  A      ++ +  +C++  +   A  + S + + G+
Sbjct: 567 NFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGV 617


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/556 (37%), Positives = 343/556 (61%), Gaps = 21/556 (3%)

Query: 302 LHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           +H++V+K+    D  I   L+  Y K G  EDA ++F  M   KD+VSW +++SG    G
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN-KDLVSWNSLMSGLSGRG 142

Query: 362 AIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVG 416
            +   +N FC+M T  G +PN  T   +++A   +        +H  ++K        V 
Sbjct: 143 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 202

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
            +L+N Y K G LD A+++FE +  + +V+W++M+  +   G  E  + ++  +   G+ 
Sbjct: 203 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGIN 262

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P++ T  +++ ACT       Q +  HA   +   N  + +++AL+ +Y+K G + ++ +
Sbjct: 263 PDQATMVALLRACTDTGLG-RQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASED 321

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           +F+  + RD ++W +M+ GYA H   ++A+++F  M ++ +E D +TF  +++AC+H+GL
Sbjct: 322 IFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGL 381

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V+EG++YF+IM   + + P ++HYSCMVDL  R+G LE A ++I  MP   S+ VW  +L
Sbjct: 382 VEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALL 441

Query: 657 AACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            ACR              L+SL P D   Y++LSN+Y+A G W++ ++VR LM +R++ +
Sbjct: 442 GACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTR 501

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
             G S+IE  NK + F+ GD  HP+S++I++KLEEL  ++++AG  P T +VL DID+E 
Sbjct: 502 NPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEV 561

Query: 763 KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
           K  ++++HSE+LAIAFGL+ T +G PL I KNLR+CGDCH+  K  S LE+R I++RD+ 
Sbjct: 562 KVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSK 621

Query: 823 RFHHFKEGLCSCGDYW 838
           RFHHF +GLCSC DYW
Sbjct: 622 RFHHFADGLCSCRDYW 637



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 215/472 (45%), Gaps = 53/472 (11%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H   +KS    D  +   LV +Y +    ED +R+FD+M   ++VSW SL+SG +    
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143

Query: 160 NDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               L  F RM+ E G +PN  T  +V+   AD G +     +H +V+K G      V N
Sbjct: 144 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 203

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +LI+MY K   +  A  +F+ M  R  ++WNSMV  +  N    +  + FN M  AG   
Sbjct: 204 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 263

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            ++T V++++ C  T   R A  +H+ + + G + D  I T L+  Y+K G++  +  IF
Sbjct: 264 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 323

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             +++ +D ++WTAM++G+  +     A+  F  M +EGV  +  T+             
Sbjct: 324 EEIKD-RDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF------------- 369

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-----EKDIVAWSAMLAG 453
                             T LL+A    G+++E  K FE++      E  +  +S M+  
Sbjct: 370 ------------------THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDL 411

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK----QFHACSIKA 509
             + G  E A   Y  + S  ++P+   + +++ AC      VE GK    Q  +     
Sbjct: 412 LGRSGRLEDA---YELIKSMPMEPSSGVWGALLGACRV-YGNVELGKEVAEQLLSLDPSD 467

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
             N  +     L  +YS  G    AS+V    ++R L    +  C + +HG+
Sbjct: 468 HRNYIM-----LSNIYSAAGLWRDASKVRALMKERRLT--RNPGCSFIEHGN 512



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 161/344 (46%), Gaps = 6/344 (1%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVL 85
           Y +  Q LFD  P ++ V +N L+            LN F  +R   G      TL SV+
Sbjct: 112 YDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 171

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C  +     G+ +H   VK G +    V  SL+++Y +   ++   ++F++M   ++V
Sbjct: 172 SACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 231

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW S++  +  N   ++ ++LF+ M+  GI P+  T   +L    D G+   A  +H  +
Sbjct: 232 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 291

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
            + G      +  AL+++Y K   +  +  +F+ ++DRD I W +M+AGY  +    EA 
Sbjct: 292 HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAI 351

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATT---KELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           + F+ M   G E+   TF  ++  C+ +   +E +   ++ S+V +     DH   + ++
Sbjct: 352 KLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH--YSCMV 409

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               + G++EDA ++   M        W A++      G ++L 
Sbjct: 410 DLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELG 453


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/734 (32%), Positives = 408/734 (55%), Gaps = 27/734 (3%)

Query: 33   SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
            +L  + P  + V +N ++  + +  L    L L+  +R  GL    ST +S+L     + 
Sbjct: 280  ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339

Query: 93   DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              V G+Q+H   V  G   +V V +SL++LY +     D + VFD   E N+V W ++L+
Sbjct: 340  AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLT 399

Query: 153  GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            G+ +N++ +  + +F  M    ++ + FTF ++LG            QVH + IKN  ++
Sbjct: 400  GFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDI 459

Query: 213  VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
               V NA + MY K   + DA+A+F  +  +DSI+WN++  G   N    EA      M 
Sbjct: 460  SLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMR 519

Query: 273  LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            L G      +F + I  C+  +     +Q+H   +K GI  +H + + L+  YSK G +E
Sbjct: 520  LHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVE 579

Query: 333  DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
             + KIF+ + +   +V   A+I+G +QN   D A+  F Q+ ++G++P+  T+S IL+  
Sbjct: 580  SSRKIFAQV-DASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 638

Query: 392  ----QPAVSPFQVHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDI 444
                  A+   QVH + +K+   Y+ +  +G +L   Y+K  +L++A K+  E+ D K++
Sbjct: 639  SGSLNSAIGK-QVHCYTLKSGVLYDDTL-LGVSLAGIYLKSKMLEDANKLLTEMPDHKNL 696

Query: 445  VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
              W+A+++GYAQ G  + ++  + ++    V+ +E TF+SV+ AC+  +A  + GK+ H 
Sbjct: 697  FEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD-GKEIHG 755

Query: 505  CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTK 563
               K+   +    +SAL+ MYSK G++ S+ E FK  + K+D++ WNSMI G+A++G+  
Sbjct: 756  LITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYAD 815

Query: 564  KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            +AL +F++M    ++ D +TF+GV+ ACTH+GL+ EG+ +F  M   + + P ++HY+C 
Sbjct: 816  EALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACF 875

Query: 624  VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
            +DL  R G L++A + I+++PF     VW T LAACR              L+ L+P  S
Sbjct: 876  IDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYS 935

Query: 670  AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
            + YVLLS+++AATG+W E    R+ M ++ V K  G SWI V NKT  FL  D  HP + 
Sbjct: 936  STYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNL 995

Query: 730  QIYSKLEELSTRLK 743
            +IY  L +L+  +K
Sbjct: 996  RIYEMLGDLTGMMK 1009



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 290/582 (49%), Gaps = 41/582 (7%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L+ VL  C  +    +GRQVHC+ VKSGF+  V    +LVD+Y +  +V + RRVFD + 
Sbjct: 161 LAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIA 220

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             + + W+S+++ Y R       L LF RM   G  P+  T  T++  LA  G       
Sbjct: 221 CPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSG------- 273

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
                                        +  A A+   M    ++ WN++++G+  + L
Sbjct: 274 ----------------------------RLDHATALLKKMPTPSTVAWNAVISGHAQSGL 305

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
                  + +M   G   TRSTF S++   A  K     +Q+H+  + +G+D +  + + 
Sbjct: 306 EFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSS 365

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+KCG   DA  +F +  E K++V W AM++G +QN   + A+  F  M R  ++ 
Sbjct: 366 LINLYAKCGCPSDAKNVFDLSCE-KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQT 424

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + FT+  IL A   +S F    QVH   IK   + S  V  A L+ Y K G + +A  +F
Sbjct: 425 DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALF 484

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            LI  KD ++W+A+  G AQ  + E AV + +++   G+ P++ +FS+ INAC+    A 
Sbjct: 485 SLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR-AT 543

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           E GKQ H  +IK  + +   V S+L+ +YSK G++ES+ ++F +     +V  N++I G+
Sbjct: 544 ETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGF 603

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
            Q+ +  +A+++F+++ +  L+   +TF  +++ C+ +     G+Q     +    +Y  
Sbjct: 604 VQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDD 663

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                 +  +Y ++ MLE A  ++  MP   +   W  +++ 
Sbjct: 664 TLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 279/558 (50%), Gaps = 11/558 (1%)

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K G A D     +++     +  ++    +   M   + V+W +++SG+A++ +   VL 
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLG 311

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYL 225
           L+  M+  G+ P   TF+++L   A+        Q+H   + +G +    V ++LI++Y 
Sbjct: 312 LYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYA 371

Query: 226 KSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
           K     DA+ VFD   +++ + WN+M+ G+V NEL  EA   F  M     +    TFVS
Sbjct: 372 KCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVS 431

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++  C       L +Q+H   +KN +D    +    +  YSK G + DA  +FS++   K
Sbjct: 432 ILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI-PYK 490

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVH 401
           D +SW A+  G  QN   + AV    +M   G+ P+  ++S  + A   +    +  Q+H
Sbjct: 491 DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIH 550

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
              IK     + +VG++L++ Y K G ++ + K+F  +D   IV  +A++AG+ Q  + +
Sbjct: 551 CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED 610

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK-LNNALCVSSA 520
            A+++++Q+  +G+KP+  TFSS+++ C+  S     GKQ H  ++K+  L +   +  +
Sbjct: 611 EAIQLFQQVLKDGLKPSSVTFSSILSGCSG-SLNSAIGKQVHCYTLKSGVLYDDTLLGVS 669

Query: 521 LVTMYSKKGNIESASEVFKRQRK-RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           L  +Y K   +E A+++       ++L  W ++I GYAQ+G+   +L  F  MR  ++  
Sbjct: 670 LAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRS 729

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNE-HHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
           D  TF  V+ AC+      +G++   ++       Y T    S ++D+YS+ G +  + +
Sbjct: 730 DEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETAT--SALIDMYSKCGDVISSFE 787

Query: 639 IINRMPFAASATVWRTVL 656
               +        W +++
Sbjct: 788 AFKELKNKQDIMPWNSMI 805



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/540 (26%), Positives = 280/540 (51%), Gaps = 17/540 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD S ++N V +N +L  + ++ L +EA+ +F  + R  L     T  S+L  C  L
Sbjct: 380 KNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYL 439

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+QVHC  +K+     + V+ + +D+Y +   + D + +F  +   + +SW +L 
Sbjct: 440 SSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALT 499

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A+N   +  + +  RM++ GI P+  +FST +   ++     T  Q+H + IK G  
Sbjct: 500 VGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGIC 559

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +V ++LI +Y K   V  +R +F  ++    +  N+++AG+V N    EA + F  +
Sbjct: 560 SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQV 619

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYSKCGK 330
              G + +  TF S++  C+ +    + +Q+H   LK+G+ +D   +   L   Y K   
Sbjct: 620 LKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKM 679

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +EDA+K+ + M + K++  WTA+ISG+ QNG  D ++  F +M    VR +  T++ +L 
Sbjct: 680 LEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLK 739

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
           A   V+ F    ++H  I K+ +    +  +AL++ Y K G +  + + F EL +++DI+
Sbjct: 740 ACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIM 799

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W++M+ G+A+ G  + A+ +++++    +KP+E TF  V+ ACT  S  + +G+ F   
Sbjct: 800 PWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTH-SGLISEGRHFFGS 858

Query: 506 -----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQH 559
                 +  +L++  C     + +  + G+++ A E   +   R D V W + +     H
Sbjct: 859 MRKVYGLTPRLDHYAC----FIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMH 914



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 268/551 (48%), Gaps = 43/551 (7%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R +H   ++ G      +  SLV+LY ++  V           E    + +SLLS +AR+
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 158 KMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                VL  F  ++   G +P+ F  + VL   +  G++A   QVH  V+K+G       
Sbjct: 136 GSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFC 195

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ MY K   V +AR VFDG+   D+I W+SM+A Y     + EA   F+ M   G+
Sbjct: 196 EAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS 255

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
              + T V++I   A++                                   G+++ A+ 
Sbjct: 256 APDQVTLVTIISTLASS-----------------------------------GRLDHATA 280

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +   M      V+W A+ISGH Q+G     +  +  M   G+ P   T++ +L+A   + 
Sbjct: 281 LLKKM-PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            F    Q+HA  +    + +  VG++L+N Y K G   +A  VF+L  EK+IV W+AML 
Sbjct: 340 AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLT 399

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G+ Q    E A+++++ +    ++ +EFTF S++ ACT  S +   GKQ H  +IK  ++
Sbjct: 400 GFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS-SFYLGKQVHCVTIKNCMD 458

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +L V++A + MYSK G I  A  +F     +D +SWN++  G AQ+   ++A+ + K M
Sbjct: 459 ISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRM 518

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R   +  D ++F   I AC++    + G+Q   + + ++ I       S ++DLYS+ G 
Sbjct: 519 RLHGITPDDVSFSTAINACSNIRATETGKQIHCLAI-KYGICSNHAVGSSLIDLYSKHGD 577

Query: 633 LEKAMDIINRM 643
           +E +  I  ++
Sbjct: 578 VESSRKIFAQV 588



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 4/331 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +  + +F +    + V  N L+  + +++   EA+ LF  + + GL     T SS+L  C
Sbjct: 579 ESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGC 638

Query: 89  GCLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVVS 146
               +   G+QVHC  +KSG    D  +  SL  +Y+++  +ED  ++  +M +  N+  
Sbjct: 639 SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 698

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WT+++SGYA+N   D  L  F RM+   ++ +  TF++VL   +D    A   ++H ++ 
Sbjct: 699 WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 758

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAGYVTNELHMEAF 265
           K+G     +  +ALI MY K   V  +   F  ++++ D + WNSM+ G+  N    EA 
Sbjct: 759 KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 818

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVA 324
             F  M     +    TF+ V+  C  +  +   R     + K  G+    +     +  
Sbjct: 819 LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDL 878

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             + G +++A +    +    D V W   ++
Sbjct: 879 LGRGGHLQEAQEAIDQLPFRPDGVVWATYLA 909



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 87/176 (49%), Gaps = 1/176 (0%)

Query: 22  LRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           L+S      ++ L +    +N  E+  ++  Y ++     +L  F  +R   +    +T 
Sbjct: 675 LKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATF 734

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-N 140
           +SVLK C  +     G+++H    KSGF      +++L+D+Y +  +V      F ++ N
Sbjct: 735 ASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKN 794

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           + +++ W S++ G+A+N   D  L LF +M+   IKP+  TF  VL      G+++
Sbjct: 795 KQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLIS 850


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/600 (39%), Positives = 344/600 (57%), Gaps = 56/600 (9%)

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNI--RTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           C+T  EL+   Q HSQ+++ G+  D++   R     A SK G +  A ++F  +    D 
Sbjct: 30  CSTMAELK---QYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPH-PDA 85

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAH 403
             +  +  G+L+       +  + +M  + V PN FTY  ++ A           Q+HAH
Sbjct: 86  YIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAH 145

Query: 404 IIKTNY-EKSFSVG------------------------------TALLNAYVKKGILDEA 432
           ++K  +    FS+                               T+L+  Y + G +D+A
Sbjct: 146 VLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKA 205

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            +VFEL+ E++ V+W+AM+A Y Q      A  ++ ++  E V  ++F  +S+++ACT  
Sbjct: 206 REVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTG- 264

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
             A+EQGK  H    K+ +     +++ ++ MY K G +E ASEVF    ++ + SWN M
Sbjct: 265 LGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCM 324

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I G A HG  + A+E+FKEM R+ +  DGITF+ V++AC H+GLV+EG+ YF  M     
Sbjct: 325 IGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLG 384

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----------- 661
           + P MEH+ CMVDL  RAG+LE+A  +IN MP    A V   ++ ACR+           
Sbjct: 385 LKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIG 444

Query: 662 ---ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
              I L+PH+S  YVLL+N+YA+ G W++ A+VRKLMNDR VKK  G+S IE ++    F
Sbjct: 445 KKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEF 504

Query: 719 LAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAF 778
           +AG  +HPQ+ +IY+KL+E+   ++  GY PDT  VL DID+E KE  L  HSE+LAIAF
Sbjct: 505 IAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAF 564

Query: 779 GLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GL+ T  G  L+I KNLR+C DCH   KLISK+  R+I++RD NRFHHF+ G CSC DYW
Sbjct: 565 GLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 194/440 (44%), Gaps = 57/440 (12%)

Query: 74  LPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDL--YMRTNNVED 131
           LPL+G      L +C  + +    +Q H + ++ G + D +    ++      ++ ++  
Sbjct: 22  LPLYG------LDSCSTMAEL---KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNY 72

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
              VFD +   +   + ++  GY R ++    + ++ RM  + + PN FT+  ++     
Sbjct: 73  ALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCI 132

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD------- 244
           +  +    Q+H  V+K G        N LI MY+  + +  AR VFD M  RD       
Sbjct: 133 DYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSL 192

Query: 245 ------------------------SITWNSMVAGYV-TNELHMEAFETFNNMGLAGAELT 279
                                   S++WN+M+A YV +N LH EAF  F+ M L    L 
Sbjct: 193 ITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLH-EAFALFDRMRLENVVLD 251

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           +    S++  C     L   + +H  + K+GI+ D  + T ++  Y KCG +E AS++F+
Sbjct: 252 KFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFN 311

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
            + + K + SW  MI G   +G  + A+  F +M RE V P+G T+  +L+A       +
Sbjct: 312 ELPQ-KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVE 370

Query: 400 VHAHIIKTNYE--------KSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAM 450
              H  +   E        + F     LL    + G+L+EA K+  E+    D     A+
Sbjct: 371 EGKHYFQYMTEVLGLKPGMEHFGCMVDLLG---RAGLLEEARKLINEMPVNPDAGVLGAL 427

Query: 451 LAGYAQIGDTEGAVKIYRQL 470
           +      G+TE   +I +++
Sbjct: 428 VGACRIHGNTELGEQIGKKV 447



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 151/368 (41%), Gaps = 38/368 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+ P  +   YN +   Y R  L +  + ++  +    +     T   +++ C   + 
Sbjct: 76  VFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYA 135

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN------------- 140
              G+Q+H   +K GF  D     +L+ +Y+   ++E  RRVFD+M              
Sbjct: 136 IEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITG 195

Query: 141 ------------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
                             E N VSW ++++ Y ++        LF RM++E +  + F  
Sbjct: 196 YSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 255

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           +++L      G +     +H  + K+G E+ + +   +I MY K   +  A  VF+ +  
Sbjct: 256 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 315

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT---KELRLA 299
           +   +WN M+ G   +     A E F  M          TFV+V+  CA +   +E +  
Sbjct: 316 KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHY 375

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
            Q  ++VL      +H    G MV    + G +E+A K+ + M    D     A++    
Sbjct: 376 FQYMTEVLGLKPGMEH---FGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACR 432

Query: 359 QNGAIDLA 366
            +G  +L 
Sbjct: 433 IHGNTELG 440



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           +  K + +F+  P+RN V +N ++  Y + +   EA  LF  +R   + L     +S+L 
Sbjct: 201 FVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLS 260

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L     G+ +H    KSG   D  ++T+++D+Y +   +E    VF+++ +  + S
Sbjct: 261 ACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISS 320

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           W  ++ G A +   +  +ELF  M+ E + P+  TF  VL   A  G+V
Sbjct: 321 WNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLV 369


>gi|297733830|emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 263/771 (34%), Positives = 405/771 (52%), Gaps = 68/771 (8%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSLLSGYAR 156
           +Q+H + V  G A++ ++   L+  Y+   N+   R VFD        + W  ++  Y++
Sbjct: 72  KQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSK 131

Query: 157 NKMNDRVLELFHRMQVEGIKPNS---FTFSTVLGVLADEGIV-ATAVQVHTMVIKNGGEV 212
              +   L LFH+M   G +P S   +TF+ V    +    +      VH MV+K+G E 
Sbjct: 132 TPSSQESLYLFHQMLAHG-RPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYES 190

Query: 213 VTSVCNALISMY-LKSKMVRDARAVFDGMEDRDSITWNSMVAGY-VTNELHMEAFETFNN 270
              V N+L++MY + S+MV DA+ VFD M  RD ITW S+V GY +  E + EA + FN+
Sbjct: 191 DIFVGNSLVNMYSIFSRMV-DAKRVFDEMPQRDVITWTSVVKGYAMRGEFYNEALQCFND 249

Query: 271 MGLAGAEL--TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           M L   E+    +  VS++  CA    L   + +H  + KN I    NI T L+  Y+KC
Sbjct: 250 M-LCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKC 308

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G+++ A ++F  + + +D+++WT+MISG   +G     +  F +M  EG +P+  T   +
Sbjct: 309 GRIDCARRVFDGLHK-RDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGV 367

Query: 389 LTA---QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           L        V    VH  ++K+ +E +  VG +++N       +++A KVF  + E+D+ 
Sbjct: 368 LNGCSHSGLVEEEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVF 427

Query: 446 AWSAMLAGYAQIGDTEGAVKIY--RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +W+++L GYA+ G+ + A   +    L  + V PNE     V++AC A   A++QG   H
Sbjct: 428 SWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPNEAVLVCVLSAC-AHLGALDQGNWIH 486

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
               K  +  +  +S+AL+ MY+K G I+ AS VF    KRD++S+ SMI G + HG  K
Sbjct: 487 LYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGK 546

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            AL                                 G      M +   I P +EHY C 
Sbjct: 547 DALR--------------------------------GSSILANMESLWGIAPKIEHYGCY 574

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----------------ISLQPH 667
           +DL  RAG LE+A++++  MP      +WR +L+A R+                +    H
Sbjct: 575 IDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIISHIGQLKSSDH 634

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           +    VLLSN+YA+ G W+    +RKLM DR+ +   G SWIEV    + F   D  HPQ
Sbjct: 635 NGG-EVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEFRVADQLHPQ 693

Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA 787
             +I +KL E+  RL   GY  +T  V  D+++E KE  ++ HSE+LAIAFGL++T  G 
Sbjct: 694 IVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEEKEQAVAWHSEKLAIAFGLMSTEPGT 753

Query: 788 PLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            ++IVKNLR C DCH+ +K IS++  R+IVVRD +RFH F EG CSC D+W
Sbjct: 754 LIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRSRFHTFIEGDCSCKDFW 804



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 234/447 (52%), Gaps = 20/447 (4%)

Query: 34  LFDRSPQ-RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLKTCGC 90
           +FD+ P     + +N ++  Y +    QE+L LF  +   G P      T + V   C  
Sbjct: 109 VFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACS- 167

Query: 91  LFDHV----FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
              H     +G  VH   VK G+  D+ V  SLV++Y   + + D +RVFD+M + +V++
Sbjct: 168 --RHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVIT 225

Query: 147 WTSLLSGYA-RNKMNDRVLELFHRMQV-EGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           WTS++ GYA R +  +  L+ F+ M   + +KPN     ++L   A  G +     +H  
Sbjct: 226 WTSVVKGYAMRGEFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVY 285

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           + KN   + +++  ALI MY K   +  AR VFDG+  RD +TW SM++G   + L  E 
Sbjct: 286 IDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAEC 345

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
             TF+ M   G +    T + V+  C+ +  L     +H  V+K+G + +  +   ++  
Sbjct: 346 LWTFSEMLAEGFKPDDITLLGVLNGCSHSG-LVEEEIVHGMVVKSGFESNLYVGNSVINM 404

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA-VNFFCQM-TREGVRPNG 382
            S   +MEDA K+F+ M E +DV SWT+++ G+ ++G +D A + FFC M   + V PN 
Sbjct: 405 CSVFARMEDARKVFNQMSE-RDVFSWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPNE 463

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
                +L+A   +        +H +I K    +S ++ TAL++ Y K G +D A++VF  
Sbjct: 464 AVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNG 523

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           I ++D++++++M++G +  G  + A++
Sbjct: 524 ICKRDVLSFTSMISGLSYHGLGKDALR 550



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 236/471 (50%), Gaps = 16/471 (3%)

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           ST + +L     +    Q+H  V+ +G    TS+   LI  Y+  + +  AR VFD    
Sbjct: 56  STFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPS 115

Query: 243 -RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT--RSTFVSVIKLCATTKELR-L 298
              +I WN M+  Y       E+   F+ M   G   +  + TF  V   C+    LR  
Sbjct: 116 LPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGY 175

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
              +H  V+K+G + D  +   L+  YS   +M DA ++F  M + +DV++WT+++ G+ 
Sbjct: 176 GENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQ-RDVITWTSVVKGYA 234

Query: 359 QNGAI-DLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKS 412
             G   + A+  F  M   + V+PN      IL+A   +        +H +I K     S
Sbjct: 235 MRGEFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLS 294

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            ++ TAL++ Y K G +D A +VF+ + ++D++ W++M++G +  G     +  + ++ +
Sbjct: 295 SNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLA 354

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           EG KP++ T   V+N C+  S  VE+ +  H   +K+   + L V ++++ M S    +E
Sbjct: 355 EGFKPDDITLLGVLNGCSH-SGLVEE-EIVHGMVVKSGFESNLYVGNSVINMCSVFARME 412

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA-LEVFKEMRRQD-LEFDGITFIGVITA 590
            A +VF +  +RD+ SW S++ GYA+HG   +A L  F  M   D +  +    + V++A
Sbjct: 413 DARKVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPNEAVLVCVLSA 472

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           C H G +D+G  +  + +++  I  +    + ++D+Y++ G ++ A  + N
Sbjct: 473 CAHLGALDQG-NWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFN 522


>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/466 (44%), Positives = 300/466 (64%), Gaps = 20/466 (4%)

Query: 391 AQPAVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           A+ A+ P  Q+HA +    +     + T L+N Y     L  A  +F+ I + +I  W+ 
Sbjct: 87  ARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNV 146

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++ GYA  G  E AV++Y Q+   G+ P+ FTF  V+ AC A SA +E G++ H   ++ 
Sbjct: 147 LIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSA-IEHGREIHEHVVQT 205

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD---LVSWNSMICGYAQHGHTKKAL 566
                + V +AL+ MY+K G + SA EVF +   RD   +VSWN+MI GYA HGH  +AL
Sbjct: 206 GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEAL 265

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
           ++F+EM R   + D ITF+GV++AC+H GL++EG  +F+ M+ ++ I PT++HY+CMVDL
Sbjct: 266 DLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDL 324

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
              +G L++A ++I +M     + VW  +L +C              RLI L+P D+  Y
Sbjct: 325 LGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNY 384

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
           V+LSN+YA  G W+  A++RKLM DR++KK    SWIEVKNK ++FL+GD SHP S++IY
Sbjct: 385 VILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIY 444

Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIV 792
           S+LE +   +K+AGY P T  V  D++D+ K  ++  HSERLAIAFGL++TP G  L I 
Sbjct: 445 SELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLIT 504

Query: 793 KNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KNLR+C DCH  IK ISK+  R+I VRD NR+HHFK+G+CSCGDYW
Sbjct: 505 KNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 139/281 (49%), Gaps = 5/281 (1%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           S  +S+L++C        G+Q+H +   +GF  D  ++T LV+LY   +++   R +FD 
Sbjct: 76  SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           + + N+  W  L+ GYA N   +  ++L+++M   G+ P++FTF  VL   A    +   
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS---ITWNSMVAGY 255
            ++H  V++ G E    V  ALI MY K   V  AR VFD +  RD+   ++WN+M+ GY
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGY 255

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFD 314
             +    EA + F  M    A+    TFV V+  C+    L         ++++  ID  
Sbjct: 256 AMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPT 314

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               T ++      G++++A  +   M+ + D   W A+++
Sbjct: 315 VQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLN 355



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 3/219 (1%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           + P    ++++L        +    Q+H  V   G    T +   L+++Y     +  AR
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            +FD +   +   WN ++ GY  N  +  A + +  M   G      TF  V+K CA   
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS--MMREMKDVVSWTA 352
            +   R++H  V++ G + D  +   L+  Y+KCG +  A ++F   ++R+   VVSW A
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNA 250

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           MI+G+  +G    A++ F +M R   +P+  T+  +L+A
Sbjct: 251 MITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSA 288



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 4/178 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFDR P+ N   +N L+  Y  +  ++ A+ L+  +   GL     T   VLK C  L  
Sbjct: 132 LFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSA 191

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM---NESNVVSWTSL 150
              GR++H   V++G+ +DV V  +L+D+Y +   V   R VFD +   +   VVSW ++
Sbjct: 192 IEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAM 251

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++GYA +      L+LF  M     KP+  TF  VL   +  G++         +I++
Sbjct: 252 ITGYAMHGHATEALDLFEEMN-RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRD 308


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 256/912 (28%), Positives = 436/912 (47%), Gaps = 144/912 (15%)

Query: 32   QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            + L D  P R    Y  L+  YCR     E  + F  +   G+      + ++LK C  +
Sbjct: 137  RKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAM 196

Query: 92   FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                 G+ VH   ++     DV V  +L+  Y    ++   R VF  M E +VVSWT+L+
Sbjct: 197  LLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALI 256

Query: 152  SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            S Y    + D    +FH MQ++G+KP+  ++S +L   A  G +  A++    + + G +
Sbjct: 257  SAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQ 316

Query: 212  VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               +                               +WN +++G V N    +A + F+ M
Sbjct: 317  PTVN-------------------------------SWNGIISGCVQNGYLEDALDMFSRM 345

Query: 272  GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                 +    T  S++  C   K LRL + +H    K+GI  +  +   ++  YSKCG  
Sbjct: 346  LWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSY 405

Query: 332  EDASKIF----------------------------SMMREMK------DVVSWTAMISGH 357
            + A K+F                             ++R M+      DV+++  ++SGH
Sbjct: 406  DYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGH 465

Query: 358  LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT--------------------------- 390
             +NG    A     +M + G++PN  +++++++                           
Sbjct: 466  ARNGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNP 525

Query: 391  -----------------AQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
                             A PA +         ++H + ++  +E +  V +AL++ Y K 
Sbjct: 526  NEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKC 585

Query: 427  GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
              +D A KVF  ID ++ V+W+A++AGY      E A+K++ ++  EG++P+  TF  + 
Sbjct: 586  HDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILF 645

Query: 487  NACTAPSAAVEQGKQFHACSIKAKLN---NALCVSSALVTMYSKKGNIESASEVFKRQRK 543
             AC    AA+  G+  H  + K +L+   NA  + SAL+ MY+K G+I  A  VF  + +
Sbjct: 646  PAC-GDIAAIRFGRGLHGYAAKCQLDELKNA--IXSALIDMYAKCGSILDAKSVFDSEVE 702

Query: 544  RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
            +D+  WN+MI  ++ HG  + A  VF +M    +  D ITF+ +++AC   GLV+EG +Y
Sbjct: 703  KDVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKY 762

Query: 604  FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--- 660
            F+ M   + +  T+EHY+CMV +   AG+L++A+D I +MP+   A +W T+L ACR   
Sbjct: 763  FNSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHS 822

Query: 661  -----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
                       L  L+P ++  Y+LLSN+Y ++G W     +R  M  RK+      S++
Sbjct: 823  NPEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYL 882

Query: 710  EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP-DTSYVLQDIDDEHKE--AI 766
             V +   +F  G+ SHP+  +I    + L+ +++ +GY P D  +     DDE KE    
Sbjct: 883  TVGSHXCTFKGGESSHPELEEILETWDXLARKMELSGYFPLDPVF-----DDEEKELDPF 937

Query: 767  LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
               H+E+LAI FG++++    P+ + KN+R+C DCHT  KLISK++ R+I V+D   +HH
Sbjct: 938  SCLHTEKLAICFGIISSNXYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYHH 997

Query: 827  FKEGLCSCGDYW 838
             K+G+C C D W
Sbjct: 998  MKDGICXCQDRW 1009



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 148/652 (22%), Positives = 287/652 (44%), Gaps = 72/652 (11%)

Query: 74  LPLFGSTLS-----------SVLKTCGCLFDHVFGRQVHCECVK-SGFARDVNVSTSLVD 121
           LP F  TL+           S+L  C  L +    RQ+H   VK +      ++   LV 
Sbjct: 68  LPSFVDTLTNSSPTEISDSISLLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVV 124

Query: 122 LYMRTN-NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
           LY +   ++ED R++ D++    V ++ +L+  Y R++  D +   F  M  EG+ P+ +
Sbjct: 125 LYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKY 184

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
              T+L   +   +      VH  VI+   E    V NALI  Y     +  +R+VF  M
Sbjct: 185 LVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSM 244

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
           ++RD ++W ++++ Y+   L  EA   F+ M L G +    ++ +++   A   E+ LA 
Sbjct: 245 QERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLAL 304

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM---REMKDVVSWTAMISGH 357
           +   ++ + G+    N   G++    + G +EDA  +FS M    E  ++++  +++   
Sbjct: 305 ETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPAC 364

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT 417
               A+ L         + G+  N +    ++        +     +      K+ ++  
Sbjct: 365 TGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWN 424

Query: 418 ALLNAYVKKGILDEA--------------------------------AKVFELIDE---- 441
            ++ AYV +G +++A                                 +  EL+ E    
Sbjct: 425 EMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQM 484

Query: 442 ---KDIVAWSAMLAGYAQIGDTEGAVKIYR--QLTSEGVKPNE----------FTFSSVI 486
               ++V+++ +++G+ Q G +  A+K++R  Q  S+G  PNE           T +  +
Sbjct: 485 GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGAL 544

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
            AC   +    QGK+ H  +++      + VSSALV MY+K  +++SA++VF R   R+ 
Sbjct: 545 PACADLNLWC-QGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNT 603

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           VSWN+++ GY  +   ++AL++F EM  + L+   ITF+ +  AC     +  G+     
Sbjct: 604 VSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGY 663

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                         S ++D+Y++ G +  A  + +         +W  +++A
Sbjct: 664 AAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDS-EVEKDVPLWNAMISA 714



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 137/266 (51%), Gaps = 7/266 (2%)

Query: 399 QVHAHIIKTNYEK-SFSVGTALLNAYVK-KGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
           Q+HA ++K N  K   S+G  L+  Y K +  L++A K+ + I  + + A++A++  Y +
Sbjct: 101 QIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCR 160

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
               +     +R +  EG+ P+++   +++ AC+A       GK  H   I+  + + + 
Sbjct: 161 SEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSA-MLLXRIGKMVHGFVIRKSVESDVF 219

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V +AL+  YS  G++ S+  VF   ++RD+VSW ++I  Y + G   +A  +F  M+   
Sbjct: 220 VGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDG 279

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           ++ D I++  +++     G +D   +  + M  E  + PT+  ++ ++    + G LE A
Sbjct: 280 VKPDLISWSALLSGFARNGEIDLALETLEEM-PERGLQPTVNSWNGIISGCVQNGYLEDA 338

Query: 637 MDIINRM---PFAASATVWRTVLAAC 659
           +D+ +RM   P   +     ++L AC
Sbjct: 339 LDMFSRMLWYPEDPNIITIASILPAC 364


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/695 (34%), Positives = 373/695 (53%), Gaps = 63/695 (9%)

Query: 200 QVHTMVIKNG-------GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
           Q+H+  IK G        + V + C A    +   KM+  AR VFD +       WN+M+
Sbjct: 25  QIHSHTIKMGLSSDPLFQKRVIAFCCA----HESGKMIY-ARQVFDAIPQPTLFIWNTMI 79

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            GY            +  M  +  +  R TF  ++K       L+  + L +  +K+G D
Sbjct: 80  KGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFD 139

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            +  ++   +  +S C  ++ A K+F M  +  +VV+W  M+SG+ +      +   F +
Sbjct: 140 SNLFVQKAFIHMFSLCRLVDLARKVFDM-GDAWEVVTWNIMLSGYNRVKQFKKSKMLFIE 198

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIK----TNYEKSFSVGTALLNAYVKKGI 428
           M + GV PN  T  ++L+A   +   +   HI K       E++  +   L++ +   G 
Sbjct: 199 MEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGE 258

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK----------------------- 465
           +DEA  VF+ +  +D+++W++++ G+A IG  + A K                       
Sbjct: 259 MDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRM 318

Query: 466 --------IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
                   ++R++    VKP+EFT  S++ AC A   A+E G+       K  + N   V
Sbjct: 319 NRFIEALALFREMQMSNVKPDEFTMVSILTAC-AHLGALELGEWVKTYIDKNSIKNDTFV 377

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            +AL+ MY K GN+  A +VFK    +D  +W +MI G A +GH ++AL +F  M    +
Sbjct: 378 GNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASI 437

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
             D IT+IGV+ ACTHAG+V++GQ +F  M  +H I P + HY CMVDL  RAG LE+A 
Sbjct: 438 TPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAH 497

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
           ++I  MP   ++ VW ++L ACR              ++ L+P + A+YVLL N+YAA  
Sbjct: 498 EVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACK 557

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W+   +VRKLM +R +KK  G S +E+    Y F+AGD SHPQS +IY+KLE +   L 
Sbjct: 558 RWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLI 617

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
            AGY PDTS V  D+ +E KE  L +HSE+LAIA+ L+++  G  ++IVKNLR+C DCH 
Sbjct: 618 KAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHH 677

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           + KL+S+   R+++VRD  RFHHF+ G CSC ++W
Sbjct: 678 MAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 124/500 (24%), Positives = 209/500 (41%), Gaps = 83/500 (16%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-------RRLGLPLF--GSTLS 82
           + +FD  PQ     +N ++  Y R +  Q  ++++L +        R   P    G T +
Sbjct: 61  RQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRN 120

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
             L+    L +H          VK GF  ++ V  + + ++     V+  R+VFD  +  
Sbjct: 121 MALQYGKVLLNHA---------VKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAW 171

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
            VV+W  +LSGY R K   +   LF  M+  G+ PNS T   +L   +    +     ++
Sbjct: 172 EVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIY 231

Query: 203 TMVIKNGGEVVTSVC--NALISMYLKSKMVRDARAVFDGMEDRDSITWNS---------- 250
             +  NGG V  ++   N LI M+     + +A++VFD M++RD I+W S          
Sbjct: 232 KYI--NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQ 289

Query: 251 ---------------------MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
                                M+ GY+     +EA   F  M ++  +    T VS++  
Sbjct: 290 IDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTA 349

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           CA    L L   + + + KN I  D  +   L+  Y KCG +  A K+F  M   KD  +
Sbjct: 350 CAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHH-KDKFT 408

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY 409
           WTAMI G   NG  + A+  F  M    + P+  TY  +L A         HA +++   
Sbjct: 409 WTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCA-------CTHAGMVEKG- 460

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
            +SF +   +     + GI            + ++  +  M+    + G  E A ++   
Sbjct: 461 -QSFFISMTM-----QHGI------------KPNVTHYGCMVDLLGRAGRLEEAHEV--- 499

Query: 470 LTSEGVKPNEFTFSSVINAC 489
           + +  VKPN   + S++ AC
Sbjct: 500 IVNMPVKPNSIVWGSLLGAC 519


>gi|302770356|ref|XP_002968597.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
 gi|300164241|gb|EFJ30851.1| hypothetical protein SELMODRAFT_89230 [Selaginella moellendorffii]
          Length = 631

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/580 (38%), Positives = 350/580 (60%), Gaps = 24/580 (4%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           + F S+++ C  ++ L   R++H++++  G+  D  +   L+  Y KCG MEDA  +F  
Sbjct: 54  AAFASLLQQCGRSRSLPDGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEDARAVFEK 113

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ- 399
           +     VVSWTAMISG   +G  DLA++FF +M  EGVRPN  T+  IL A  A    + 
Sbjct: 114 IESPNSVVSWTAMISGFALHGREDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDVKH 173

Query: 400 ---VHAHIIKTNYEKSF-SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              +H  +  + + +S+ SVGTAL++ Y K G  + A++VFE ++ +D+V W+AM+   +
Sbjct: 174 GTAIHELVESSEFGRSYLSVGTALIDMYGKCGRPELASRVFEKMERRDLVVWNAMITVCS 233

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA- 514
           Q G  E A++++R +  EG  P+E T  + + AC+  ++ +  GK+ H   + A L+++ 
Sbjct: 234 QQGLDEQALRLFRVMDLEGHTPDEVTLVAALEACSNLNS-LAAGKKLHELILDAGLDSSI 292

Query: 515 -LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + +++ALV MY + G +E A  VF++    +LV+W ++I  +AQHG    A+++   M 
Sbjct: 293 KMVLATALVNMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQHGDVH-AIDLSWRMH 351

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
            + ++ D I F+ V+ AC+HAG+++ G   F  MV +  +     HYSCMVDL +R G +
Sbjct: 352 LEGVQADDIVFLSVLHACSHAGVLEAGLSCFQGMVADFGVRGGAAHYSCMVDLLARCGRV 411

Query: 634 EKAMDIINRMPFAASATVWRTVLAACRLIS--------------LQPHDSAIYVLLSNMY 679
            +A ++++ MPF  +    +T+LAACR+                L P D+A YVL+S+ Y
Sbjct: 412 AEAEELLHSMPFEPAHMEMKTLLAACRVSGDTPRGARVARLASGLIPLDAAPYVLMSHAY 471

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS-HPQSNQIYSKLEEL 738
           AA   W E A VR+ M    VKK  G+S +EVKN+ + F AG+ S H ++ +I  +L  L
Sbjct: 472 AAAEKWDEVAEVRERMAKLGVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRL 531

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
              +K+AGY PDT  +   + ++ KE +L+ HSER+AIAFGL+  PAG P+ +VKNLRVC
Sbjct: 532 QAVVKEAGYVPDTGQIGHCVQEDDKEDLLALHSERVAIAFGLLRVPAGLPIHVVKNLRVC 591

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            DCH V K+IS+   R IVVRD  RFH F+ G CSCGDYW
Sbjct: 592 SDCHAVAKIISRSVGRRIVVRDAYRFHRFENGTCSCGDYW 631



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 164/317 (51%), Gaps = 6/317 (1%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           +  +S+L+ CG       GR++H E V +G  +D+ +   L+ +Y +   +ED R VF+ 
Sbjct: 54  AAFASLLQQCGRSRSLPDGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEDARAVFEK 113

Query: 139 MNESN-VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
           +   N VVSWT+++SG+A +   D  L+ F +M  EG++PN  TF ++LG  A    V  
Sbjct: 114 IESPNSVVSWTAMISGFALHGREDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDVKH 173

Query: 198 AVQVHTMVIKNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
              +H +V  +  G    SV  ALI MY K      A  VF+ ME RD + WN+M+    
Sbjct: 174 GTAIHELVESSEFGRSYLSVGTALIDMYGKCGRPELASRVFEKMERRDLVVWNAMITVCS 233

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID--FD 314
              L  +A   F  M L G      T V+ ++ C+    L   ++LH  +L  G+D    
Sbjct: 234 QQGLDEQALRLFRVMDLEGHTPDEVTLVAALEACSNLNSLAAGKKLHELILDAGLDSSIK 293

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             + T L+  Y + G++EDA ++F  M    ++V+WTA+I+   Q+G +  A++   +M 
Sbjct: 294 MVLATALVNMYGRYGQLEDALRVFEKMNHW-NLVAWTALIAAFAQHGDVH-AIDLSWRMH 351

Query: 375 REGVRPNGFTYSIILTA 391
            EGV+ +   +  +L A
Sbjct: 352 LEGVQADDIVFLSVLHA 368


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/702 (33%), Positives = 390/702 (55%), Gaps = 39/702 (5%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M+  GI  + F  ++++        +    ++H  +I  G      +  AL+ MY K   
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           + DA+ VF+GME +D   W+S+++ Y        A   +  M   G E    TF   +  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           CA+   L   R +H ++L + +  D  ++  L+  Y KC +M +A K+F  M+  ++V S
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMK-ARNVRS 179

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
           +TAMIS ++Q G    A+  F +M++ E + PN +T++ IL A   +   +    VH H+
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
               ++ +  V  AL+  Y K G   EA KVF+ +  +++++W++M+A YAQ G+ + A+
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            +++++    V+P+  +FSS +NAC A   A+++G++ H   ++A L +   + ++L++M
Sbjct: 300 NLFKRMD---VEPSGVSFSSALNAC-ALLGALDEGREIHHRVVEAHLASPQ-METSLLSM 354

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y++ G+++ A  VF R + RD  S N+MI  + QHG  K+AL +++ M ++ +  DGITF
Sbjct: 355 YARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITF 414

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + V+ AC+H  LV + + +F  +V +H + P +EHY CMVD+  R+G L  A +++  MP
Sbjct: 415 VSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMP 474

Query: 645 FAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERAR 690
           +   A  W T+L+ C              ++  L P ++  YV LSNMYAA   + +  R
Sbjct: 475 YQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARR 534

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN-------QIYSKLEELSTRLK 743
           VRK M +R V      S+IE+ N+ + F +G     Q         ++ S L EL   +K
Sbjct: 535 VRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMK 594

Query: 744 DAGYKPDTSYVLQD----IDDEHKEAILSQHSERLAIAFGLVAT--PAGA-PLQIVKNLR 796
            AGY PDT  V  +      +E K+  L  HSERLAIA+GL+A   P  + PL++V + R
Sbjct: 595 QAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHR 654

Query: 797 VCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           VC DCH+ IKL+S +  + I VRD NRFHHF++G CSCGD+W
Sbjct: 655 VCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 259/490 (52%), Gaps = 19/490 (3%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           ++S++  C  L     GR++H   + +GF  D+ + T+L+ +Y +  +++D +RVF+ M 
Sbjct: 13  VTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGME 72

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             ++ +W+S++S YAR    +  + L+ RM  EG++PN  TF+  LG  A    +A    
Sbjct: 73  IKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRA 132

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  ++ +       + ++L++MYLK   + +AR VF+GM+ R+  ++ +M++ YV    
Sbjct: 133 IHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGE 192

Query: 261 HMEAFETFNNMGLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           H EA E F+ M    A E    TF +++        L   R++H  +   G D +  ++ 
Sbjct: 193 HAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQN 252

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KCG   +A K+F  M   ++V+SWT+MI+ + Q+G    A+N F +M    V 
Sbjct: 253 ALVTMYGKCGSPVEARKVFDSM-TARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VE 308

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+G ++S  L A   +       ++H  +++ +   S  + T+LL+ Y + G LD+A +V
Sbjct: 309 PSGVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLLSMYARCGSLDDARRV 367

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  +  +D  + +AM+A + Q G  + A++IYR++  EG+  +  TF SV+ AC+  S  
Sbjct: 368 FNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLV 427

Query: 496 VEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWN 550
            +    F +      +   + + LC    +V +  + G +  A E+ +    + D V+W 
Sbjct: 428 ADCRDFFQSLVMDHGVVPLVEHYLC----MVDVLGRSGRLGDAEELVETMPYQTDAVAWM 483

Query: 551 SMICGYAQHG 560
           +++ G  +HG
Sbjct: 484 TLLSGCKRHG 493



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 224/450 (49%), Gaps = 20/450 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F+    ++   ++ ++  Y R    + A+ L+  +   G+     T +  L  C  +
Sbjct: 65  KRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASV 124

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR +H   + S   +D  +  SL+++Y++ + + + R+VF+ M   NV S+T+++
Sbjct: 125 AGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMI 184

Query: 152 SGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           S Y +   +   LELF RM +VE I+PN++TF+T+LG +   G +    +VH  +   G 
Sbjct: 185 SAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGF 244

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           +    V NAL++MY K     +AR VFD M  R+ I+W SM+A Y  +    EA   F  
Sbjct: 245 DTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKR 304

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M +   E +  +F S +  CA    L   R++H +V++  +     + T L+  Y++CG 
Sbjct: 305 MDV---EPSGVSFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGS 360

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ++DA ++F+ M+  +D  S  AMI+   Q+G    A+  + +M +EG+  +G T+  +L 
Sbjct: 361 LDDARRVFNRMK-TRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLV 419

Query: 391 AQPAVSP-------FQ--VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID- 440
           A    S        FQ  V  H +    E        +++   + G L +A ++ E +  
Sbjct: 420 ACSHTSLVADCRDFFQSLVMDHGVVPLVEHYL----CMVDVLGRSGRLGDAEELVETMPY 475

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           + D VAW  +L+G  + GD     +  R++
Sbjct: 476 QTDAVAWMTLLSGCKRHGDLNRGERAARKV 505



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 140/294 (47%), Gaps = 18/294 (6%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS 83
           SP  ++K   +FD    RN + +  ++  Y +    QEALNLF   +R+ +   G + SS
Sbjct: 263 SPVEARK---VFDSMTARNVISWTSMIAAYAQHGNPQEALNLF---KRMDVEPSGVSFSS 316

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
            L  C  L     GR++H   V++  A    + TSL+ +Y R  +++D RRVF+ M   +
Sbjct: 317 ALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRD 375

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VH 202
             S  ++++ + ++    + L ++ RM+ EGI  +  TF +VL   +   +VA       
Sbjct: 376 AFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQ 435

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVT---- 257
           ++V+ +G   +      ++ +  +S  + DA  + + M    D++ W ++++G       
Sbjct: 436 SLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDL 495

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           N     A + F    LA AE     F+S   + A  K    AR++  ++ + G+
Sbjct: 496 NRGERAARKVFE---LAPAETLPYVFLS--NMYAAAKRFDDARRVRKEMEERGV 544


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/580 (36%), Positives = 349/580 (60%), Gaps = 21/580 (3%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L  S   S++   ++   +     +H++V+K+    D  I   L+  Y K G  EDA ++
Sbjct: 137 LADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRL 196

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVS 396
           F  M   +D+VSW +++SG    G +   +N FC+M T  G +PN  T   +++A   + 
Sbjct: 197 FDEMPN-RDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMG 255

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                  +H  ++K        V  +L+N Y K G LD A+++FE +  + +V+W++M+ 
Sbjct: 256 ALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVV 315

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            +   G  E  + ++  +   G+ P++ T  +++ ACT       Q +  HA   +   N
Sbjct: 316 IHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLG-RQAESIHAYIHRCGFN 374

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             + +++AL+ +Y+K G + ++ ++F+  + RD ++W +M+ GYA H   ++A+++F  M
Sbjct: 375 ADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLM 434

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
            ++ +E D +TF  +++AC+H+GLV+EG++YF+IM   + + P ++HYSCMVDL  R+G 
Sbjct: 435 VKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGR 494

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNM 678
           LE A ++I  MP   S+ VW  +L ACR              L+SL P D   Y++LSN+
Sbjct: 495 LEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNI 554

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           Y+A G W+  ++VR LM +R++ +  G S+IE  NK + F+ GD  HP+S++I++KLEEL
Sbjct: 555 YSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEEL 614

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
             ++ +AG  P T +VL DID+E K  ++++HSE+LAIAFGL+ T +G PL I KNLR+C
Sbjct: 615 IRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRIC 674

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCH+  K  S LE+R I++RD+ RFHHF +GLCSC DYW
Sbjct: 675 GDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 215/470 (45%), Gaps = 49/470 (10%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +H   +KS    D  +   LV +Y +    ED +R+FD+M   ++VSW SL+SG +    
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220

Query: 160 NDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               L  F RM+ E G +PN  T  +V+   A  G +     +H +V+K G      V N
Sbjct: 221 LGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN 280

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +LI+MY K   +  A  +F+ M  R  ++WNSMV  +  N    +  + FN M  AG   
Sbjct: 281 SLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINP 340

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            ++T V++++ C  T   R A  +H+ + + G + D  I T L+  Y+K G++  +  IF
Sbjct: 341 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 400

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             +++ +D ++WTAM++G+  +     A+  F  M +EGV  +  T+             
Sbjct: 401 EEIKD-RDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTF------------- 446

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-----EKDIVAWSAMLAG 453
                             T LL+A    G+++E  K FE++      E  +  +S M+  
Sbjct: 447 ------------------THLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDL 488

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF--HACSIKAKL 511
             + G  E A   Y  + S  ++P+   + +++ AC      VE GK+      S+    
Sbjct: 489 LGRSGRLEDA---YELIKSMPMEPSSGVWGALLGACRV-YGNVELGKEVAEQLLSLDPSD 544

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
           +    +   L  +YS  G    AS+V    ++R L    +  C + +HG+
Sbjct: 545 HRNYIM---LSNIYSAAGLWRXASKVRXLMKERRLT--RNPGCSFIEHGN 589



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 162/344 (47%), Gaps = 6/344 (1%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVL 85
           Y +  Q LFD  P R+ V +N L+            LN F  +R   G      TL SV+
Sbjct: 189 YDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 248

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C  +     G+ +H   VK G +    V  SL+++Y +   ++   ++F++M   ++V
Sbjct: 249 SACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 308

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW S++  +  N   ++ ++LF+ M+  GI P+  T   +L    D G+   A  +H  +
Sbjct: 309 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 368

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
            + G      +  AL+++Y K   +  +  +F+ ++DRD+I W +M+AGY  +    EA 
Sbjct: 369 HRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAI 428

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATT---KELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           + F+ M   G E+   TF  ++  C+ +   +E +   ++ S+V +     DH   + ++
Sbjct: 429 KLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDH--YSCMV 486

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               + G++EDA ++   M        W A++      G ++L 
Sbjct: 487 DLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELG 530


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/643 (37%), Positives = 361/643 (56%), Gaps = 26/643 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N L++MY K  ++  A+ V      R  +TW S+++G V N   + A   F NM     +
Sbjct: 46  NHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQ 105

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               TF  V K  A  +     +Q+H   LK G+ +D  +       Y K G   DA  +
Sbjct: 106 PNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNM 165

Query: 338 FSMMREMKDVVSWTAMISGHLQNG-AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           F  M + +++ +W A IS  +Q+  ++D  V F   +   G  PN  T+   L A   + 
Sbjct: 166 FDEMPQ-RNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHG-EPNSITFCAFLNACVDMV 223

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI-DEKDIVAWSAML 451
                 Q+HA I++  Y++  SV   L++ Y K G +  A  VF  I + K++V+W +ML
Sbjct: 224 RLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSML 283

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           A   Q  + E A  ++ Q   E V+P +F  SSV++AC A    +E G+  HA ++KA +
Sbjct: 284 AALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSAC-AELGGLELGRSVHALAVKACV 341

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            + + V SALV MY K G+IE+A +VF    +R+LV+WN+MI GYA  G    AL +F+E
Sbjct: 342 EDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEE 401

Query: 572 MR--RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           M      +    +T I +++ C+  G V+ G Q F+ M   + I P  EH++C+VDL  R
Sbjct: 402 MTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGR 461

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           +G++++A + I  M    + +VW  +L ACR              L  L   DS  +V+L
Sbjct: 462 SGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVL 521

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SNM A+ G W+E   VRK M D  +KK  GYSWI VKN+ + F A D SH ++++I + L
Sbjct: 522 SNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAML 581

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
            +L   +K+AGY PDT+  L D++DE K + +  HSE++A+AFGL+A P G P++I KNL
Sbjct: 582 GKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNL 641

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+CGDCH+ IK IS++  R+I+VRD +RFH FK+G CSC DYW
Sbjct: 642 RICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 246/498 (49%), Gaps = 17/498 (3%)

Query: 76  LFGSTLSSVLKT-CGCLFDHVFGRQVHCECVKSGFARDVN-VSTSLVDLYMRTNNVEDGR 133
           L GS L S + T C      + GR +H   +++      + +S  LV++Y + + +   +
Sbjct: 8   LLGSLLESAVSTHCS-----ILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQ 62

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
            V    +   VV+WTSL+SG   N+     L  F  M+ + ++PN FTF  V    A   
Sbjct: 63  HVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQ 122

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
           I  T  Q+H + +K G      V  +   MY K+    DA  +FD M  R+  TWN+ ++
Sbjct: 123 IPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYIS 182

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
             V +   ++A   F        E    TF + +  C     L L RQLH+ +++ G   
Sbjct: 183 NAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKE 242

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D ++  GL+  Y KCG +  A  +F+ +   K+VVSW +M++  +QN   + A   F Q 
Sbjct: 243 DVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQA 302

Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
            +E V P  F  S +L+A   +   +    VHA  +K   E +  VG+AL++ Y K G +
Sbjct: 303 RKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSI 361

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT--SEGVKPNEFTFSSVIN 487
           + A +VF  + E+++V W+AM+ GYA  GD + A++++ ++T  S G++P+  T  S+++
Sbjct: 362 ENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILS 421

Query: 488 ACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
            C+    AVE+G Q F +  +   +       + +V +  + G ++ A E  +    +  
Sbjct: 422 VCSR-VGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPT 480

Query: 547 VS-WNSMICGYAQHGHTK 563
           +S W +++     HG T+
Sbjct: 481 ISVWGALLGACRMHGKTE 498



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 209/452 (46%), Gaps = 22/452 (4%)

Query: 27  YSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           YSK D     Q +   +  R  V +  L+     +     AL  F  +RR  +     T 
Sbjct: 52  YSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTF 111

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
             V K    +   + G+Q+H   +K G   DV V  S  D+Y +T    D   +FD+M +
Sbjct: 112 PCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQ 171

Query: 142 SNVVSWTSLLSGYARNKMN-DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
            N+ +W + +S   +++ + D ++     + V G +PNS TF   L    D   +    Q
Sbjct: 172 RNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHG-EPNSITFCAFLNACVDMVRLNLGRQ 230

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS-ITWNSMVAGYVTNE 259
           +H  +++ G +   SV N LI  Y K   +  A  VF+ + +R + ++W SM+A  V N 
Sbjct: 231 LHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNH 290

Query: 260 LHMEAFETFNNMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
               A   F     A  E+  + F+  SV+  CA    L L R +H+  +K  ++ +  +
Sbjct: 291 EEERACMVFLQ---ARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFV 347

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT--R 375
            + L+  Y KCG +E+A ++FS + E +++V+W AMI G+   G ID+A+  F +MT   
Sbjct: 348 GSALVDMYGKCGSIENAEQVFSELPE-RNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGS 406

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQVHAHI---IKTNY--EKSFSVGTALLNAYVKKGILD 430
            G+RP+  T   IL+    V   +    I   ++ NY  E        +++   + G++D
Sbjct: 407 HGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVD 466

Query: 431 EAAKVFE-LIDEKDIVAWSAMLAGYAQIGDTE 461
            A +  + +  +  I  W A+L      G TE
Sbjct: 467 RAYEFIQNMAIQPTISVWGALLGACRMHGKTE 498


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/609 (36%), Positives = 358/609 (58%), Gaps = 53/609 (8%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           S  V  ++ CA  +   + ++LH  ++K GID   ++   L+  Y KCG ++DA  +F+ 
Sbjct: 4   SHLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQ 63

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSPF- 398
           +   +D +SW ++++ + Q     L ++ F  M ++ G++P+ + ++ ++ A   +    
Sbjct: 64  LPH-RDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMK 122

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
              QVHA  I +       V ++L++ Y K G+ D    VF+ I  K+ ++W+AM++GYA
Sbjct: 123 QGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYA 182

Query: 456 QIGDTEGAVKIYRQLT-------------------------------SEGVK-PNEFTFS 483
           Q G    A+++++++                                S+G+   + F  S
Sbjct: 183 QSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILS 242

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
           S+I A +A  A +  GKQ H   I     ++L VS+ALV MY+K  ++ +A ++F R  +
Sbjct: 243 SIIGA-SANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQ 301

Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
           RD+VSW S+I G AQHG  ++AL ++  M    L+ + +TF+G+I AC+H GLV +G+ +
Sbjct: 302 RDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYF 361

Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC---- 659
           F+ M+ ++ I P+++HY+C++DL SR+G LE+A ++I  MPF      W  +L+AC    
Sbjct: 362 FNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHR 421

Query: 660 ----------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
                      L+SL+P D + Y+LLSN+YA+   W+  ++VR+LM   +VKKE GYS I
Sbjct: 422 NTLIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCI 481

Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
            +  ++  FLAG+ SHP   +I+  LEEL   +K  GY PDTS VL D++ + KE  L  
Sbjct: 482 VLGKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFW 541

Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
           HSERLA+A+GL+    G  L IVKNLRVCGDCHTV+K IS + +R+IVVRD NR+HHFK+
Sbjct: 542 HSERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKD 601

Query: 830 GLCSCGDYW 838
           G CSC ++W
Sbjct: 602 GKCSCNNFW 610



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 207/449 (46%), Gaps = 41/449 (9%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G+++HC  +K+G  +  ++S +L+++Y +   ++D   +F+ +   + +SW S+L+   
Sbjct: 21  IGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANN 80

Query: 156 RNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           +  +    L +F  M + +G++P+ + F+ ++   A  G +    QVH   I +      
Sbjct: 81  QANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDD 140

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM--- 271
            V ++L+ MY K  +    R VFD +  ++SI+W +M++GY  +   ++A + F  M   
Sbjct: 141 VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVK 200

Query: 272 ----------GLAGAELTRSTFV-------------------SVIKLCATTKELRLARQL 302
                     GL  +     +F                    S+I   A    L L +Q+
Sbjct: 201 NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI 260

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H  V+  G +    +   L+  Y+KC  +  A KIF  M + +D+VSWT++I G  Q+G 
Sbjct: 261 HCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQ-RDIVSWTSIIVGTAQHGL 319

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV-----SPFQVHAHIIKTNYEKSFSVGT 417
            + A++ + +M   G++PN  T+  ++ A   V       +  ++ I       S    T
Sbjct: 320 AEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYT 379

Query: 418 ALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQLTS-EGV 475
            LL+   + G L+EA  + + +  K D   W+A+L+      +T   +++   L S +  
Sbjct: 380 CLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPE 439

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHA 504
            P+ +   S I A  A   +V + ++  A
Sbjct: 440 DPSTYILLSNIYASAAMWESVSKVRRLMA 468



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 172/371 (46%), Gaps = 36/371 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGCL 91
           +LF++ P R+ + +  +L    + +L    L++F  + ++ GL       + ++K C  L
Sbjct: 59  NLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAIL 118

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+QVH   + S  + D  V +SLVD+Y +    + GR VFD ++  N +SWT+++
Sbjct: 119 GAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMI 178

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKP--------------------------------NS 179
           SGYA++      ++LF +M V+ +                                  + 
Sbjct: 179 SGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDP 238

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
           F  S+++G  A+  ++    Q+H +VI  G E    V NAL+ MY K   V  A+ +F  
Sbjct: 239 FILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGR 298

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           M  RD ++W S++ G   + L  EA   +N M   G +    TFV +I  C+    +   
Sbjct: 299 MVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKG 358

Query: 300 RQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG-- 356
           R   + ++K+ GI+      T L+   S+ G +E+A  +   M    D  +W A++S   
Sbjct: 359 RYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACN 418

Query: 357 HLQNGAIDLAV 367
           H +N  I + V
Sbjct: 419 HHRNTLIGIRV 429


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/562 (38%), Positives = 336/562 (59%), Gaps = 22/562 (3%)

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           LR   QLH++ LK     + ++ T L+  Y++CG +  A ++F  M      VSWTA+I+
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPH-PSTVSWTALIT 192

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS- 414
            ++  G +  AV+        G+RP+ FT   +LTA   V+       + +   ++  + 
Sbjct: 193 AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQ 252

Query: 415 ---VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              V TA ++ YVK G + +A +VF+ + +KD VAW AM+ GYA  G    A+ ++  + 
Sbjct: 253 SVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQ 312

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGN 530
           +EGV+P+ +  +  ++ACT    A++ G+Q          L+N + + +AL+ MY+K G+
Sbjct: 313 AEGVRPDCYAVAGALSACTR-LGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGS 370

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
              A  VF++ RK+D++ WN+MI G    GH K A  +  +M +  ++ +  TFIG++ +
Sbjct: 371 TAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCS 430

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           CTH GL+ +G++YF  M   +HI P +EHY C+VDL SRAG+L++A  +I+ MP  A+A 
Sbjct: 431 CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAV 490

Query: 651 VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           +   +L  C+              LI L+P +S  YV+LSN+Y+  G W++ A++R  M 
Sbjct: 491 ILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 550

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           ++ V+K    SW+E + K + F  GD SHP S+QIY KL+EL   +K  GY+P T  V+ 
Sbjct: 551 EKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 610

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D++DE KE  L  HSE+LAIAF L+ T  G  +++ KNLRVC DCHT IKLIS++  R+I
Sbjct: 611 DVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREI 670

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           +VRD NRFH F++G CSC DYW
Sbjct: 671 IVRDNNRFHCFRDGSCSCNDYW 692



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 5/343 (1%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H   +K        V  +L+++Y +  ++  A+ VFD M    +++W +++  Y+   
Sbjct: 139 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG 198

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA     N    G      T V V+  CA   +L     +     + GI     + T
Sbjct: 199 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 258

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
             +  Y KCG+M  A ++F  MR+ KD V+W AM+ G+  NG    A++ F  M  EGVR
Sbjct: 259 AAVDLYVKCGEMAKAREVFDKMRD-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 317

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF----SVGTALLNAYVKKGILDEAAKV 435
           P+ +  +  L+A   +    +    I+      F     +GTAL++ Y K G   EA  V
Sbjct: 318 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVV 377

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + +KDI+ W+AM+ G    G  + A  +  Q+   GVK N+ TF  ++ +CT     
Sbjct: 378 FQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLI 437

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
            +  + FH  +    ++  +     +V + S+ G ++ A ++ 
Sbjct: 438 QDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLI 480



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 167/378 (44%), Gaps = 15/378 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H   +K     + +V TSL+ LY R   +   +RVFD+M   + VSWT+L++ Y  
Sbjct: 137 GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD 196

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  + +       G++P+SFT   VL   A    +AT   V     + G      V
Sbjct: 197 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 256

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             A + +Y+K   +  AR VFD M D+D++ W +MV GY +N    EA + F  M   G 
Sbjct: 257 ATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGV 316

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                     +  C     L L RQ    V  +    +  + T L+  Y+KCG   +A  
Sbjct: 317 RPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWV 376

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQP 393
           +F  MR+ KD++ W AMI G    G    A     QM + GV+ N  T+  +L   T   
Sbjct: 377 VFQQMRK-KDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTG 435

Query: 394 AVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
            +   + + H +   Y  S  +     +++   + G+L EA    +LID+  + A + +L
Sbjct: 436 LIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEA---HQLIDDMPMPANAVIL 492

Query: 452 AGYAQIGDTEGAVKIYRQ 469
                 G   G  KI+R 
Sbjct: 493 ------GALLGGCKIHRN 504



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 157/358 (43%), Gaps = 23/358 (6%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + Q +FD  P  + V +  L+  Y      +EA+++       G+     T   VL  C 
Sbjct: 171 RAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACA 230

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            + D   G  V     + G A+ V V+T+ VDLY++   +   R VFD M + + V+W +
Sbjct: 231 RVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGA 290

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GYA N      L+LF  MQ EG++P+ +  +  L      G +    Q   MV  + 
Sbjct: 291 MVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 350

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 +  ALI MY K     +A  VF  M  +D I WN+M+ G         AF    
Sbjct: 351 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIG 410

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT---------- 319
            M  +G +L  +TF+ +  LC+ T         H+ ++++G  + HN+            
Sbjct: 411 QMEKSGVKLNDNTFIGL--LCSCT---------HTGLIQDGRRYFHNMTKLYHISPRIEH 459

Query: 320 -GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            G +V   S+ G +++A ++   M    + V   A++ G   +   +LA +   Q+ R
Sbjct: 460 YGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIR 517



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 1/167 (0%)

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+  TF   + + +     +  G+Q HA S+K   +    V ++L+T+Y++ G +  A  
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF        VSW ++I  Y   G  ++A+ V +      +  D  T + V+TAC     
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  G+  +     E  I  ++   +  VDLY + G + KA ++ ++M
Sbjct: 235 LATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 280


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/665 (36%), Positives = 374/665 (56%), Gaps = 30/665 (4%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           ++H  +     +  T + N L+  Y K   +  A+  F  +   ++ +WN ++A Y  N 
Sbjct: 53  KLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNG 112

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
               A   F+ M   G      T  + +  C   + L L R+L+  +    ++ D ++ +
Sbjct: 113 HPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVES 172

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y +C ++E+A + F    E KDVV WTAMIS +  N     A+    +M  EG++
Sbjct: 173 SLITMYGRCREIEEAERAFDRSPE-KDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIK 231

Query: 380 PNGFTYSIILTAQPAVS------PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
               TY  +L A  +         F   A  I  +   +   GT L+N Y K G +D+A 
Sbjct: 232 LGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGT-LVNLYGKCGRVDDAR 290

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +V + +  +  V+W+AM+A YAQ G+   A+ +++ +  EG +P++ T  SV+++C A  
Sbjct: 291 RVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSC-AVL 349

Query: 494 AAVEQGKQFHACSIKAK--LNNALCVSSALVTMYSKKGNIESASEVFK--RQRKRDLVSW 549
             +  GK+ HA  I++    + +L + +A++TMY K GN+E A EVF+    R R +V+W
Sbjct: 350 GTLSLGKRIHA-RIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTW 408

Query: 550 NSMICGYAQHGHTKKALEVFKEMR-RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
            +MI  YAQ+G  ++A+E+F+EM      E + +TF+ V+ AC+H G +++  ++F  M 
Sbjct: 409 TAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMG 468

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP-FAASATVWRTVLAAC-------- 659
            +  + P  +HY C+VDL  RAG L +A  ++ R   F A    W   L+AC        
Sbjct: 469 PDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLER 528

Query: 660 ------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKN 713
                 R+  L+P + A  VLLSN+YAA G   + AR+R  M    VKK AG SWIE+ N
Sbjct: 529 SQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINN 588

Query: 714 KTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSER 773
           + + F+  D+SHP+  +IYS+LE L   +K+AGY PDT  VL+D+D+E K  +L  HSER
Sbjct: 589 RVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSER 648

Query: 774 LAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCS 833
           LA+A G+++TP G  L++VKNLRVC DCH   K IS++  R I+VRDT+RFHHFK+G+CS
Sbjct: 649 LAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCS 708

Query: 834 CGDYW 838
           CGDYW
Sbjct: 709 CGDYW 713



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 246/501 (49%), Gaps = 24/501 (4%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R++H +       R+  +   LVD Y +  ++   +  F  +   N  SW  L++ YA+N
Sbjct: 52  RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                   LFH M  +G++PN+ T ST L        +A   +++ ++     E+ + V 
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVE 171

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           ++LI+MY + + + +A   FD   ++D + W +M++ Y  N     A E    M L G +
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIK 231

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASK 336
           L   T+VS++  CA+T +LR     H +    G+D    +  G +V  Y KCG+++DA +
Sbjct: 232 LGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARR 291

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +   M  ++  VSWTAMI+ + QNG    A+N F  M  EG  P+  T   ++ +   + 
Sbjct: 292 VLDAM-PVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLG 350

Query: 397 PF----QVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEAAKVFELID--EKDIVAWSA 449
                 ++HA I  + ++ +S  +  A++  Y K G L+ A +VFE +    + +V W+A
Sbjct: 351 TLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTA 410

Query: 450 MLAGYAQIGDTEGAVKIYRQ-LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           M+  YAQ G  E A++++++ L   G +PN  TF SV+ AC+     +EQ  + H CS+ 
Sbjct: 411 MIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACS-HLGQLEQAWE-HFCSMG 468

Query: 509 AKL-----NNALCVSSALVTMYSKKGNIESASEVFKRQR--KRDLVSWNSMICGYAQHGH 561
                    +  C    LV +  + G +  A ++  R +  + D+V W + +     +G 
Sbjct: 469 PDFGVPPAGDHYC---CLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGD 525

Query: 562 TKKALEVFKEMRRQDLEFDGI 582
            +++    K  R  +LE + +
Sbjct: 526 LERSQRAAK--RVSELEPENV 544



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 211/454 (46%), Gaps = 17/454 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q  F R    N   +N L+  Y ++   + A  LF  +   G+     TLS+ L  C   
Sbjct: 87  QLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAA 146

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   GR+++          D +V +SL+ +Y R   +E+  R FD   E +VV WT+++
Sbjct: 147 RNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMI 206

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-G 210
           S YA N    R LEL  RM +EGIK    T+ ++L   A    +   V  H      G  
Sbjct: 207 SAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLD 266

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
              T V   L+++Y K   V DAR V D M  R S++W +M+A Y  N    EA   F  
Sbjct: 267 RSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQC 326

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKC 328
           M L GAE +  T +SV+  CA    L L +++H+++ ++   F  ++     ++  Y KC
Sbjct: 327 MDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARI-RSSPSFSQSLMLLNAVITMYGKC 385

Query: 329 GKMEDASKIFSMMR-EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYS 386
           G +E A ++F  +    + VV+WTAMI  + QNG  + A+  F +M  + G  PN  T+ 
Sbjct: 386 GNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFL 445

Query: 387 IILTAQPAVSPF-QVHAHIIKTNYEKSFSVGTA------LLNAYVKKGILDEAAKVFELI 439
            +L A   +    Q   H      +  F V  A      L++   + G L EA K+    
Sbjct: 446 SVLCACSHLGQLEQAWEHFCSMGPD--FGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRH 503

Query: 440 D--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              E D+V W A L+     GD E + +  ++++
Sbjct: 504 KDFEADVVCWIAFLSACQMNGDLERSQRAAKRVS 537



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +++ ++ HA     KL+    + + LV  YSK G++  A   F R    +  SWN ++ 
Sbjct: 47  GLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMA 106

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH-HI 613
            YAQ+GH + A  +F  M  Q +  + +T    + ACT A  +  G++  +++ +E   I
Sbjct: 107 AYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEI 166

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMP----------FAASATVWRT 654
              +E  S ++ +Y R   +E+A    +R P           +A A  WRT
Sbjct: 167 DSHVE--SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRT 215


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/647 (35%), Positives = 368/647 (56%), Gaps = 23/647 (3%)

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLAD 191
           R +FD M   + +SWT+L++GY     +   L LF  M V+ G++ + F  S  L     
Sbjct: 110 RYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGL 169

Query: 192 EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
              +     +H   +K+G      V +ALI MY+K   +     VF  M  R+ ++W ++
Sbjct: 170 GVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAI 229

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +AG V    +MEA   F+ M ++       TF   +K  A +  L   + +H+Q +K G 
Sbjct: 230 IAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGF 289

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
           D    +   L   Y+KCGK +   ++F  M+ M DVVSWT +I+ ++Q G  + AV  F 
Sbjct: 290 DESSFVINTLATMYNKCGKADYVMRLFEKMK-MPDVVSWTTLITTYVQKGEEEHAVEAFK 348

Query: 372 QMTREGVRPNGFTYSIILTA--QPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
           +M +  V PN +T++ +++A    A++ +  Q+H H+++     + SV  +++  Y K G
Sbjct: 349 RMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSG 408

Query: 428 ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVIN 487
           +L  A+ VF  I  KDI++WS ++A Y+Q G  + A      +  EG KPNEF  SSV++
Sbjct: 409 LLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLS 468

Query: 488 ACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
            C    A +EQGKQ HA  +   +++   V SAL++MYSK G++E AS++F   +  +++
Sbjct: 469 VC-GSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNII 527

Query: 548 SWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
           SW +MI GYA+HG++++A+ +F+++    L+ D +TFIGV+TAC+HAG+VD G  YF +M
Sbjct: 528 SWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLM 587

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------- 660
            NE+ I P+ EHY C++DL  RAG L +A  +I  MP      VW T+L +CR       
Sbjct: 588 TNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDR 647

Query: 661 -------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKN 713
                  L+ L P+ +  ++ L+N+YAA G W+E A +RKLM  + V KE G+SW+ V +
Sbjct: 648 GRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVND 707

Query: 714 KTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           K  +F+AGD +HPQS  I + LE LS  + DA  + +   +  D++D
Sbjct: 708 KLNAFVAGDQAHPQSEHITTVLELLSANIGDA--RQEIRSLNDDVED 752



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 244/466 (52%), Gaps = 6/466 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVLKTC 88
           K + +FD+   R+ + +  L+  Y   S   EAL LF  +  + GL      +S  LK C
Sbjct: 108 KSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKAC 167

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G   +  FG  +H   VKSG    V VS++L+D+YM+   +E G RVF  M + NVVSWT
Sbjct: 168 GLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWT 227

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++G      N   L  F  M +  +  +S TF+  L   AD  ++     +HT  IK 
Sbjct: 228 AIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQ 287

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +  + V N L +MY K         +F+ M+  D ++W +++  YV       A E F
Sbjct: 288 GFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAF 347

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M  +     + TF +VI  CA     +   Q+H  VL+ G+    ++   ++  YSK 
Sbjct: 348 KRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKS 407

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++ AS +F  +   KD++SW+ +I+ + Q G    A ++   M REG +PN F  S +
Sbjct: 408 GLLKSASLVFHGITR-KDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSV 466

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L+   +++      QVHAH++    +    V +AL++ Y K G ++EA+K+F  +   +I
Sbjct: 467 LSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNI 526

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           ++W+AM+ GYA+ G ++ A+ ++ +++S G+KP+  TF  V+ AC+
Sbjct: 527 ISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS 572



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 237/436 (54%), Gaps = 18/436 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+ +   +K   +  +R +FD M  RD I+W +++AGYV      EA   F+NM +    
Sbjct: 94  NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPG- 152

Query: 278 LTRSTF-VSV-IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           L R  F +SV +K C     +     LH   +K+G+     + + L+  Y K GK+E   
Sbjct: 153 LQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGC 212

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           ++F  M + ++VVSWTA+I+G +  G    A+ +F +M    V  +  T++I L A    
Sbjct: 213 RVFKKMTK-RNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADS 271

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           S       +H   IK  +++S  V   L   Y K G  D   ++FE +   D+V+W+ ++
Sbjct: 272 SLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLI 331

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
             Y Q G+ E AV+ ++++    V PN++TF++VI+AC A  A  + G+Q H   ++  L
Sbjct: 332 TTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISAC-ANLAIAKWGEQIHGHVLRLGL 390

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
            +AL V++++VT+YSK G ++SAS VF    ++D++SW+++I  Y+Q G+ K+A +    
Sbjct: 391 VDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSW 450

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSCMVDLY 627
           MRR+  + +      V++ C    L+++G+Q     V+ H +   ++H    +S ++ +Y
Sbjct: 451 MRREGPKPNEFALSSVLSVCGSMALLEQGKQ-----VHAHVLCIGIDHEAMVHSALISMY 505

Query: 628 SRAGMLEKAMDIINRM 643
           S+ G +E+A  I N M
Sbjct: 506 SKCGSVEEASKIFNGM 521



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 224/438 (51%), Gaps = 15/438 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSVLKTCG-- 89
           +F +  +RN V +  ++        + EAL  F  + I ++G      T +  LK     
Sbjct: 214 VFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYD--SHTFAIALKASADS 271

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L  H  G+ +H + +K GF     V  +L  +Y +    +   R+F+ M   +VVSWT+
Sbjct: 272 SLLHH--GKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTT 329

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L++ Y +    +  +E F RM+   + PN +TF+ V+   A+  I     Q+H  V++ G
Sbjct: 330 LITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLG 389

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                SV N+++++Y KS +++ A  VF G+  +D I+W++++A Y       EAF+  +
Sbjct: 390 LVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLS 449

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G +       SV+ +C +   L   +Q+H+ VL  GID +  + + L+  YSKCG
Sbjct: 450 WMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCG 509

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +E+ASKIF+ M+ + +++SWTAMI+G+ ++G    A+N F +++  G++P+  T+  +L
Sbjct: 510 SVEEASKIFNGMK-INNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVL 568

Query: 390 TA--QPAVSPFQVHAHIIKTN-YEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKD 443
           TA     +     +  ++ TN Y+ S S      +++   + G L EA  +   +    D
Sbjct: 569 TACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTD 628

Query: 444 IVAWSAMLAGYAQIGDTE 461
            V WS +L      GD +
Sbjct: 629 DVVWSTLLRSCRVHGDVD 646



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 5/175 (2%)

Query: 26  FYSK----KDQSL-FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            YSK    K  SL F    +++ + ++ ++  Y +    +EA +    +RR G       
Sbjct: 403 LYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFA 462

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           LSSVL  CG +     G+QVH   +  G   +  V ++L+ +Y +  +VE+  ++F+ M 
Sbjct: 463 LSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMK 522

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            +N++SWT++++GYA +  +   + LF ++   G+KP+  TF  VL   +  G+V
Sbjct: 523 INNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMV 577


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/763 (30%), Positives = 414/763 (54%), Gaps = 43/763 (5%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K  S F+  P R+ V +N +L  Y ++    +++ +F+ + R G+   G T + +LK C 
Sbjct: 132 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 191

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L D   G Q+H   V+ G   DV  +++L+D+Y +     +  RVF  + E N VSW++
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSA 251

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G  +N +    L+ F  MQ      +   +++VL   A    +    Q+H   +K+ 
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V  A + MY K   ++DA+ +FD  E+ +  ++N+M+ GY   E   +A   F+
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +  +G      +   V + CA  K L    Q++   +K+ +  D  +    +  Y KC 
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            + +A ++F  MR  +D VSW A+I+ H QNG     +  F  M R  + P+ FT+  IL
Sbjct: 432 ALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490

Query: 390 TAQPAVS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV----------- 435
            A    S     ++H+ I+K+    + SVG +L++ Y K G+++EA K+           
Sbjct: 491 KACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550

Query: 436 -----FELIDEKDI----VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
                 E +  K +    V+W+++++GY     +E A  ++ ++   G+ P++FT+++V+
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           + C A  A+   GKQ HA  IK +L + + + S LV MYSK G++  +  +F++  +RD 
Sbjct: 611 DTC-ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           V+WN+MICGYA HG  ++A+++F+ M  ++++ + +TFI ++ AC H GL+D+G +YF +
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 729

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------ 660
           M  ++ + P + HYS MVD+  ++G +++A+++I  MPF A   +WRT+L  C       
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 789

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    L+ L P DS+ Y LLSN+YA  G W++ + +R+ M   K+KKE G SW+E+
Sbjct: 790 EVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 849

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           K++ + FL GD +HP+  +IY +L  + + +K      D+S+V
Sbjct: 850 KDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF---DDSSFV 889



 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 280/558 (50%), Gaps = 35/558 (6%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RDV     +++ Y ++N++      F+ M   +VVSW S+LSGY +N  + + +E+F  M
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             EGI+ +  TF+ +L V +     +  +Q+H +V++ G +      +AL+ MY K K  
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            ++  VF G+ +++S++W++++AG V N L   A + F  M    A +++S + SV++ C
Sbjct: 232 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A   ELRL  QLH+  LK+    D  +RT  +  Y+KC  M+DA  +F     + +  S+
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL-NRQSY 350

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHIIK 406
            AMI+G+ Q      A+  F ++   G+  +  + S +  A   V       Q++   IK
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           ++      V  A ++ Y K   L EA +VF+ +  +D V+W+A++A + Q G     + +
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           +  +    ++P+EFTF S++ ACT  S     G + H+  +K+ + +   V  +L+ MYS
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTGGSLGY--GMEIHSSIVKSGMASNSSVGCSLIDMYS 528

Query: 527 KKGNIESASEVFKR-------------------QRKRDL-VSWNSMICGYAQHGHTKKAL 566
           K G IE A ++  R                   +R +++ VSWNS+I GY     ++ A 
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +F  M    +  D  T+  V+  C +      G+Q     V +  +   +   S +VD+
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ-IHAQVIKKELQSDVYICSTLVDM 647

Query: 627 YSRAG-------MLEKAM 637
           YS+ G       M EK++
Sbjct: 648 YSKCGDLHDSRLMFEKSL 665



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 253/508 (49%), Gaps = 43/508 (8%)

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
           QV  +   +F+F  V    A +G +    Q H  +I +G    T V N L+ +Y  S+  
Sbjct: 42  QVNSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99

Query: 231 RDARAVFDGMEDRDSITWNSMV-------------------------------AGYVTNE 259
             A  VFD M  RD ++WN M+                               +GY+ N 
Sbjct: 100 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG 159

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
             +++ E F +MG  G E    TF  ++K+C+  ++  L  Q+H  V++ G D D    +
Sbjct: 160 ESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAAS 219

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+K  +  ++ ++F  + E K+ VSW+A+I+G +QN  + LA+ FF +M +    
Sbjct: 220 ALLDMYAKGKRFVESLRVFQGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 278

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            +   Y+ +L +  A+S      Q+HAH +K+++     V TA L+ Y K   + +A  +
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+  +  +  +++AM+ GY+Q      A+ ++ +L S G+  +E + S V  AC A    
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC-ALVKG 397

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           + +G Q +  +IK+ L+  +CV++A + MY K   +  A  VF   R+RD VSWN++I  
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           + Q+G   + L +F  M R  +E D  TF  ++ ACT  G +  G +    +V       
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSG--MA 514

Query: 616 TMEHYSC-MVDLYSRAGMLEKAMDIINR 642
           +     C ++D+YS+ GM+E+A  I +R
Sbjct: 515 SNSSVGCSLIDMYSKCGMIEEAEKIHSR 542


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 265/807 (32%), Positives = 430/807 (53%), Gaps = 60/807 (7%)

Query: 61   EALNLFLGIRRLGLPLFGSTLSSVLKTCGCL--FDHVFGRQVHCECVKSGFARDVNVSTS 118
            EA  LF  +   G+     T  +VL+ C  L   + +F R  H      G   D  + T+
Sbjct: 315  EAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQCEKIFARVKHL-----GLELDTTLGTA 369

Query: 119  LVDLYMRTNNVEDGRRVFDDMNES-NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
             V  + +  ++   R VF+++  S NVVSWT ++  YA+        +L+ RM  E   P
Sbjct: 370  FVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---P 426

Query: 178  NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE--VVTSVCNALISMYLKSKMVRDARA 235
            N+ TF  V+        +  A Q+H  ++ +G E  VV  VC  L++MY K   V  A +
Sbjct: 427  NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVC--LVTMYGKCGSVDSAWS 484

Query: 236  VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
            +F+ +++R  + WNSM++ + +N  +  + + +  M L G +  + T+++V+  C +  E
Sbjct: 485  IFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSE 544

Query: 296  LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
             R     ++   +  ++ D   R   + AY++CG +++A   F  ++   + V+W AMIS
Sbjct: 545  ARR----YAATFE--LELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMIS 598

Query: 356  GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
            G  Q+G    A+  F +M  EGVR N  TY   L A  ++       Q+HA I+  N  +
Sbjct: 599  GLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIHE 658

Query: 412  SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            + ++  A++N Y K G LDEA   F  + E+D+++W+ M+A YAQ G    A++ ++Q+ 
Sbjct: 659  A-NLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMD 717

Query: 472  SEGVKPNEFTFSSVINAC-TAPSAAVEQGKQFHACSIKAK--LNNALCVSSALVTMYSKK 528
             EG  P+  T+   I+AC + PS A+  GK  H+    A   L     V++ALVTMY++ 
Sbjct: 718  LEGWTPDRATYLGAIDACGSVPSLAL--GKTIHSIVATAAPCLEQDPGVATALVTMYARC 775

Query: 529  GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
            G++  A  VF R   R+LV+W+++I   AQHG   +AL++F+EM+ Q  + D +TF  ++
Sbjct: 776  GSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLV 835

Query: 589  TACTHAGLV-DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
             AC+  G+V D G++ FD +   + +  + EHY CMV++  RAG LE+A  +I  MP  A
Sbjct: 836  AACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKA 895

Query: 648  SATVWRTVLAAC--------------RLISLQPHD-SAIYVLLSNMYAATGHWQERARVR 692
            S  +W  +LAAC              R   L P   +A   +L+ +Y A G W++ ARVR
Sbjct: 896  SGAIWMALLAACNRRGDLERGIRAANRAQQLDPGSFAASMAMLAELYGAAGRWEDAARVR 955

Query: 693  KLMNDRKVKKE-AGYSWIEVKNKTYSFLAGD--ISHPQSNQIYSKLEELST-RLKDAGYK 748
            K +  R  ++E  G SWIEV N+ + F   D  +  P+ ++I  +L+ LS+  +++ G  
Sbjct: 956  KAVESRNARREPGGRSWIEVNNRVHEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGIC 1015

Query: 749  PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
             D        ++     +   HSE++AI FG+V+TPAG  ++IVKNLR C DCH   K +
Sbjct: 1016 KD--------ENARAHILGCCHSEKVAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFV 1067

Query: 809  SKLERRDIVVRDTNRFHHF-KEGLCSC 834
            S+  +R+I VRD    H F   G CSC
Sbjct: 1068 SRRIQREISVRDPYGLHCFHTNGSCSC 1094



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 185/638 (28%), Positives = 335/638 (52%), Gaps = 25/638 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCGC 90
           +++F+R P+RN V +N L+    ++   ++A+ +F  +   G +    +T  SV+  C  
Sbjct: 181 KAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSN 240

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV---SW 147
           L D   G+  H   +++GF   + V  SLV++Y +  +V+  R VF+ M   +V+   SW
Sbjct: 241 LLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSW 300

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T +++ +A N        LF++M +EG+ PN  TF TVL        +A   ++   V  
Sbjct: 301 TVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACT---TLAQCEKIFARVKH 357

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGM-EDRDSITWNSMVAGYVTNELHMEAFE 266
            G E+ T++  A +S + K   +  AR VF+ +   R+ ++W  M+  Y        AF+
Sbjct: 358 LGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFD 417

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            +  M     E    TF++V+  C   ++L  A Q+H+ ++ +G + D  ++  L+  Y 
Sbjct: 418 LYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYG 474

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG ++ A  IF  ++E + VV+W +M+S    NG  + ++  + +M  EG +P+  TY 
Sbjct: 475 KCGSVDSAWSIFENLKE-RSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYL 533

Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIV 445
            +L A  +VS  + +A   +   E   +   A ++AY + G L EA   F+ I  K + V
Sbjct: 534 AVLDACQSVSEARRYAATFE--LELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAV 591

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+AM++G AQ G+++ A++ + ++  EGV+ N  T+ + + AC++    + +G+Q HA 
Sbjct: 592 TWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLK-DLTRGRQLHAR 650

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            +   ++ A  +S+A++ MY K G+++ A + F +  +RD++SWN+MI  YAQHG  ++A
Sbjct: 651 ILLENIHEAN-LSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQA 709

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YS 621
           LE FK+M  +    D  T++G I AC     +  G+    I+       P +E      +
Sbjct: 710 LEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATA---APCLEQDPGVAT 766

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
            +V +Y+R G L  A  +  R   + +   W  ++AAC
Sbjct: 767 ALVTMYARCGSLHDAKSVFWR-SHSRNLVTWSNLIAAC 803



 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 170/583 (29%), Positives = 307/583 (52%), Gaps = 19/583 (3%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +S+L+ C        G+ VH   + SG   +  +   L+ +Y +   ++D   VF+ +  
Sbjct: 30  ASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPC 89

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            NV SWT+L++ YA+      VL  F +MQ++G KP++F FSTVL   +  G +     +
Sbjct: 90  PNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAI 149

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  V+  G E    V NA++++Y K   V +A+AVF+ + +R+ ++WN+++A    N   
Sbjct: 150 HDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHC 208

Query: 262 MEAFETFNNMGLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
            +A + F  M L G+     +TFVSV+  C+   +L   +  H ++++ G D    +   
Sbjct: 209 KDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNS 268

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVV---SWTAMISGHLQNGAIDLAVNFFCQMTREG 377
           L+  Y KCG ++ A  +F  MR ++DV+   SWT +I+    NG +  A   F +M  EG
Sbjct: 269 LVNMYGKCGSVDHARLVFEKMR-LRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEG 327

Query: 378 VRPNGFTYSIILTAQPAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           V PN  T+  +L A   ++  + + A +     E   ++GTA ++ + K G L  A  VF
Sbjct: 328 VLPNKVTFVTVLRACTTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVF 387

Query: 437 E-LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           E L   +++V+W+ M+  YAQ G    A  +Y+++  E   PN  TF +V+++C  P   
Sbjct: 388 ENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPE-D 443

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           + + +Q HA  + +   + + +   LVTMY K G+++SA  +F+  ++R +V+WNSM+  
Sbjct: 444 LPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSA 503

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           +A +G  +++L++++ M  +  + D IT++ V+ AC     V E ++Y      E  I  
Sbjct: 504 FASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQS---VSEARRYAATFELELDIAA 560

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
                +  V  Y+R G L++A    + + +  +A  W  +++ 
Sbjct: 561 R----NAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISG 599



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 251/518 (48%), Gaps = 33/518 (6%)

Query: 159 MNDRVLELFHRMQVEGIKPNSFT-----FSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           MN    EL  +  +  +K +S +     ++++L   A++   A    VH  ++ +G  V 
Sbjct: 1   MNPAATELSLQTHINQLKKSSESLQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVN 60

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + N LI MY K   ++DA  VF+ +   +  +W +++  Y       E    F  M L
Sbjct: 61  RYLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQL 120

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +     F +V+  C++   L   + +H  V+  G++    +   ++  Y KCG++ +
Sbjct: 121 DGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGME-TQVVGNAIVNLYGKCGRVHE 179

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQ 392
           A  +F  + E +++VSW A+I+ + QNG    A+  F  M  +G VRPN  T+  ++ A 
Sbjct: 180 AKAVFERLPE-RNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDAC 238

Query: 393 PAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV--- 445
             +         H  II+T ++    VG +L+N Y K G +D A  VFE +  +D++   
Sbjct: 239 SNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVY 298

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W+ ++A +A  G    A  ++ ++  EGV PN+ TF +V+ ACT     + Q ++  A 
Sbjct: 299 SWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACT----TLAQCEKIFAR 354

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKK 564
                L     + +A V+ ++K G++ +A +VF+     R++VSW  MI  YAQ G  + 
Sbjct: 355 VKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRA 414

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----Y 620
           A +++K M   D E + +TF+ V+ +C     +   +Q     ++ H +    E      
Sbjct: 415 AFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQ-----IHAHMVASGFESDVVLQ 466

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            C+V +Y + G ++ A  I   +    S   W ++L+A
Sbjct: 467 VCLVTMYGKCGSVDSAWSIFENLK-ERSVVAWNSMLSA 503


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/575 (36%), Positives = 346/575 (60%), Gaps = 20/575 (3%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T   +++LCA  + L + +  H   +  G+  D      L+  Y+KCG+ + A ++F  M
Sbjct: 58  TLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAM 117

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA----VSP 397
             ++ ++SW  MI+G+  N     A+  F +M REG +   FT S  L A  A    +  
Sbjct: 118 -SVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIEC 176

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            Q+H   IK   + S  VGTA L+ Y K  ++ +A  VFE + EK  V WS++ AG+ Q 
Sbjct: 177 KQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQN 236

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G  E  + +++    EG++  EFT SS+++ C A  A + +G Q HA  +K   +  L V
Sbjct: 237 GLHEEVLCLFQSTQREGMQLTEFTVSSILSTC-ASLALIIEGTQVHAVIVKHGFHRNLFV 295

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           +++LV +Y+K G IE + EVF    ++++V WN+MI  +++H H+ +A+ +F++M++  +
Sbjct: 296 ATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGI 355

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
             + +T++ +++AC+H GLV+EG+ YF++++++    P + HYSCMVD+  R+G  ++A 
Sbjct: 356 FPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAW 415

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
            ++++MPF  +A++W ++L + R              L  L+P +   +VLLSN+YAA+G
Sbjct: 416 KLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVLLSNVYAASG 475

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
           +W+     RK + D   KKE G SWIE K K + F+AG+  HP    +Y+KLEE+   ++
Sbjct: 476 NWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNKLEEIYHEMR 535

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
              ++ +T   L D+  + KE +L  HSE+LA AFGL++ P   P+ I KNLR+CGDCH+
Sbjct: 536 KISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKNLRICGDCHS 595

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +K++S +  R ++VRD NRFHHFK+G CSCGD+W
Sbjct: 596 FMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 184/337 (54%), Gaps = 6/337 (1%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           ++VE    + FT   +L + A    +      H + I  G    T  CN LI++Y K   
Sbjct: 47  VRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQ 106

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
              AR VFD M  R  I+WN+M+AGY  N   +EA + F+ M   G ++T  T  S +  
Sbjct: 107 NDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCA 166

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           CA    +   +QLH+  +K  +D    + T  +  Y+KC  ++DA  +F  M E K  V+
Sbjct: 167 CAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPE-KTSVT 225

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           W+++ +G +QNG  +  +  F    REG++   FT S IL+   +++      QVHA I+
Sbjct: 226 WSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIV 285

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
           K  + ++  V T+L++ Y K G ++++ +VF  ++EK++V W+AM+A +++   +  A+ 
Sbjct: 286 KHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMI 345

Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           ++ ++   G+ PNE T+ S+++AC+  +  VE+G+ +
Sbjct: 346 LFEKMQQVGIFPNEVTYLSILSACS-HTGLVEEGRHY 381



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 169/312 (54%), Gaps = 1/312 (0%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL  +L+ C      + G+  H   +  G   D      L++LY +    +  RRVFD M
Sbjct: 58  TLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAM 117

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +  +++SW ++++GY  N+ +   L+LF RM  EG +   FT S+ L   A +  +    
Sbjct: 118 SVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECK 177

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+HT+ IK   +  + V  A + +Y K  M++DA  VF+ M ++ S+TW+S+ AG+V N 
Sbjct: 178 QLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNG 237

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           LH E    F +    G +LT  T  S++  CA+   +    Q+H+ ++K+G   +  + T
Sbjct: 238 LHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVAT 297

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+KCG++E + ++F+ M E K+VV W AMI+   ++     A+  F +M + G+ 
Sbjct: 298 SLVDVYAKCGQIEKSYEVFADMEE-KNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIF 356

Query: 380 PNGFTYSIILTA 391
           PN  TY  IL+A
Sbjct: 357 PNEVTYLSILSA 368



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 165/347 (47%), Gaps = 6/347 (1%)

Query: 26  FYSKKDQS-----LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            Y+K  Q+     +FD    R+ + +N ++  Y  +    EAL LF  + R G  +   T
Sbjct: 100 LYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFT 159

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           LSS L  C   +  +  +Q+H   +K        V T+ +D+Y + N ++D   VF++M 
Sbjct: 160 LSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP 219

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E   V+W+SL +G+ +N +++ VL LF   Q EG++   FT S++L   A   ++    Q
Sbjct: 220 EKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQ 279

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH +++K+G      V  +L+ +Y K   +  +  VF  ME+++ + WN+M+A +  +  
Sbjct: 280 VHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAH 339

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA   F  M   G      T++S++  C+ T  +   R   + +L +     + +   
Sbjct: 340 SWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYS 399

Query: 321 LMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            MV    + GK ++A K+   M        W +++     +  I LA
Sbjct: 400 CMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLA 446


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/672 (34%), Positives = 382/672 (56%), Gaps = 63/672 (9%)

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           S  N++++ Y  + M RDAR +FD M DR+ I+WN +V+GY+ N    EA + F+ M   
Sbjct: 49  SSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLM--- 105

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVL-KNGIDFDHNIRTGLMVAYSKCGKMED 333
             E    ++ +++K      ++ +A  L  ++  KN + +     T +++ + + G+++D
Sbjct: 106 -PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW-----TVMLIGFLQDGRIDD 159

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K++ M+ + KD ++ T+MI G  + G +D A   F +M+   V     T++ ++T   
Sbjct: 160 ACKLYEMIPD-KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYG 214

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
             +       I     EK+    T++L  YV+ G +++A ++FE++  K ++A +AM++G
Sbjct: 215 QNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISG 274

Query: 454 YAQIGDTEGAVKIYRQLTS-------------------------------EGVKPNEFTF 482
             Q G+   A +++  +                                 +GV+P   T 
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTL 334

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            S+++ C A  A++  GKQ HA  ++ + +  + V+S L+TMY K G +  +  +F R  
Sbjct: 335 ISILSVC-ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP 393

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQ 601
            +D++ WNS+I GYA HG  ++AL+VF EM      + + +TF+  ++AC++AG+V+EG 
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
           + ++ M +   + P   HY+CMVD+  RAG   +AM++I+ M     A VW ++L ACR 
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513

Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                        LI ++P +S  Y+LLSNMYA+ G W + A +RKLM  R V+K  G S
Sbjct: 514 HSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573

Query: 708 WIEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           W EV+NK ++F  G I SHP+   I   L+EL   L++AGY PD SY L D+D+E K   
Sbjct: 574 WTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNS 633

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           L  HSERLA+A+ L+    G P++++KNLRVC DCHT IK+ISK++ R+I++RD NRFHH
Sbjct: 634 LKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHH 693

Query: 827 FKEGLCSCGDYW 838
           F+ G CSC DYW
Sbjct: 694 FRNGECSCKDYW 705



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 223/474 (47%), Gaps = 30/474 (6%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           R++     LV  YM+   +++ R+VFD M E NVVSWT+L+ GY  N   D    LF +M
Sbjct: 77  RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
                + N  +++ +L     +G +  A +++ M+        TS+ + L     K   V
Sbjct: 137 P----EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGL----CKEGRV 188

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            +AR +FD M +R  ITW +MV GY  N    +A + F+ M     E T  ++ S++   
Sbjct: 189 DEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGY 244

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
                +  A +L   +    +   + + +GL     + G++  A ++F  M+E  D  SW
Sbjct: 245 VQNGRIEDAEELFEVMPVKPVIACNAMISGL----GQKGEIAKARRVFDSMKERND-ASW 299

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
             +I  H +NG    A++ F  M ++GVRP   T   IL+   +++      QVHA +++
Sbjct: 300 QTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
             ++    V + L+  Y+K G L ++  +F+    KDI+ W+++++GYA  G  E A+K+
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKV 419

Query: 467 YRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
           + ++   G  KPNE TF + ++AC+      E  K + +      +       + +V M 
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479

Query: 526 SKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH-------TKKALEVFKE 571
            + G    A E+      + D   W S++     H          KK +E+  E
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE 533



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 213/465 (45%), Gaps = 59/465 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P+RN V +  L+  Y  +     A +LF  +         + +S  +   G L
Sbjct: 99  RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE------KNKVSWTVMLIGFL 152

Query: 92  FDHVFGR-QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
            D   GR    C+  +    +D    TS++    +   V++ R +FD+M+E +V++WT++
Sbjct: 153 QD---GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNG 209
           ++GY +N   D   ++F  M     +    +++++L      G +  A ++   M +K  
Sbjct: 210 VTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP- 264

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                  CNA+IS   +   +  AR VFD M++R+  +W +++  +  N   +EA + F 
Sbjct: 265 ----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G   T  T +S++ +CA+   L   +Q+H+Q+++   D D  + + LM  Y KCG
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSII 388
           ++  +  IF      KD++ W ++ISG+  +G  + A+  FC+M   G  +PN  T+   
Sbjct: 381 ELVKSKLIFDRFPS-KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF--- 436

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
                                        A L+A    G+++E  K++E ++   +    
Sbjct: 437 ----------------------------VATLSACSYAGMVEEGLKIYESME--SVFGVK 466

Query: 449 AMLAGYAQIGDTEGAVKIYRQ----LTSEGVKPNEFTFSSVINAC 489
            + A YA + D  G    + +    + S  V+P+   + S++ AC
Sbjct: 467 PITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 202/434 (46%), Gaps = 65/434 (14%)

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           + +AR +FD  + +   +WNSMVAGY  N +  +A + F+ M                  
Sbjct: 33  IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP----------------- 75

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRT--GLMVAYSKCGKMEDASKIFSMMREMKDV 347
                                   D NI +  GL+  Y K G++++A K+F +M E ++V
Sbjct: 76  ------------------------DRNIISWNGLVSGYMKNGEIDEARKVFDLMPE-RNV 110

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
           VSWTA++ G++ NG +D+A + F +M  +    N  +++++L              + + 
Sbjct: 111 VSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEM 166

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
             +K     T++++   K+G +DEA ++F+ + E+ ++ W+ M+ GY Q    + A KI+
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
             +  +     E +++S++          +  + F    +K      +   +A+++   +
Sbjct: 227 DVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVK-----PVIACNAMISGLGQ 277

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
           KG I  A  VF   ++R+  SW ++I  + ++G   +AL++F  M++Q +     T I +
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337

Query: 588 ITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           ++ C     +  G+Q    +V    +  +Y      S ++ +Y + G L K+  I +R P
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVA----SVLMTMYIKCGELVKSKLIFDRFP 393

Query: 645 FAASATVWRTVLAA 658
            +    +W ++++ 
Sbjct: 394 -SKDIIMWNSIISG 406



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 11/266 (4%)

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           +   RRVFD M E N  SW +++  + RN      L+LF  MQ +G++P   T  ++L V
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
            A    +    QVH  +++   +V   V + L++MY+K   +  ++ +FD    +D I W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGA-ELTRSTFVSVIKLCA----TTKELRLARQLH 303
           NS+++GY ++ L  EA + F  M L+G+ +    TFV+ +  C+      + L++   + 
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           S      I   +     ++    + G+  +A ++   M    D   W +++     +  +
Sbjct: 461 SVFGVKPITAHYACMVDML---GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517

Query: 364 DLAVNFFCQMTREGVRP-NGFTYSII 388
           D+A   FC      + P N  TY ++
Sbjct: 518 DVAE--FCAKKLIEIEPENSGTYILL 541



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 119/232 (51%), Gaps = 3/232 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K + +FD   +RN   +  ++  + R+    EAL+LF+ +++ G+     TL S+L  C 
Sbjct: 283 KARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G+QVH + V+  F  DV V++ L+ +Y++   +   + +FD     +++ W S
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402

Query: 150 LLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIK 207
           ++SGYA + + +  L++F  M + G  KPN  TF   L   +  G+V   ++++ +M   
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTN 258
            G + +T+    ++ M  ++    +A  + D M  + D+  W S++    T+
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 16/185 (8%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST----LSSVL 85
           K + +FDR P ++ + +N ++  Y    L +EAL +F       +PL GST    ++ V 
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCE-----MPLSGSTKPNEVTFVA 438

Query: 86  KTCGCLFDHVF--GRQVHCECVKSGFARDVNVS--TSLVDLYMRTNNVEDGRRVFDDMN- 140
               C +  +   G +++ E ++S F      +    +VD+  R     +   + D M  
Sbjct: 439 TLSACSYAGMVEEGLKIY-ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E +   W SLL G  R      V E   +  +E    NS T+  +  + A +G  A   +
Sbjct: 498 EPDAAVWGSLL-GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 556

Query: 201 VHTMV 205
           +  ++
Sbjct: 557 LRKLM 561


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/763 (30%), Positives = 414/763 (54%), Gaps = 43/763 (5%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           K  S F+  P R+ V +N +L  Y ++    +++ +F+ + R G+   G T + +LK C 
Sbjct: 90  KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 149

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L D   G Q+H   V+ G   DV  +++L+D+Y +     +  RVF  + E N VSW++
Sbjct: 150 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSA 209

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           +++G  +N +    L+ F  MQ      +   +++VL   A    +    Q+H   +K+ 
Sbjct: 210 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 269

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V  A + MY K   ++DA+ +FD  E+ +  ++N+M+ GY   E   +A   F+
Sbjct: 270 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 329

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +  +G      +   V + CA  K L    Q++   +K+ +  D  +    +  Y KC 
Sbjct: 330 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 389

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            + +A ++F  MR  +D VSW A+I+ H QNG     +  F  M R  + P+ FT+  IL
Sbjct: 390 ALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 448

Query: 390 TAQPAVS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV----------- 435
            A    S     ++H+ I+K+    + SVG +L++ Y K G+++EA K+           
Sbjct: 449 KACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 508

Query: 436 -----FELIDEKDI----VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
                 E +  K +    V+W+++++GY     +E A  ++ ++   G+ P++FT+++V+
Sbjct: 509 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 568

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           + C A  A+   GKQ HA  IK +L + + + S LV MYSK G++  +  +F++  +RD 
Sbjct: 569 DTC-ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 627

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           V+WN+MICGYA HG  ++A+++F+ M  ++++ + +TFI ++ AC H GL+D+G +YF +
Sbjct: 628 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 687

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------ 660
           M  ++ + P + HYS MVD+  ++G +++A+++I  MPF A   +WRT+L  C       
Sbjct: 688 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 747

Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    L+ L P DS+ Y LLSN+YA  G W++ + +R+ M   K+KKE G SW+E+
Sbjct: 748 EVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 807

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           K++ + FL GD +HP+  +IY +L  + + +K      D+S+V
Sbjct: 808 KDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF---DDSSFV 847



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/558 (28%), Positives = 280/558 (50%), Gaps = 35/558 (6%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           RDV     +++ Y ++N++      F+ M   +VVSW S+LSGY +N  + + +E+F  M
Sbjct: 70  RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 129

Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
             EGI+ +  TF+ +L V +     +  +Q+H +V++ G +      +AL+ MY K K  
Sbjct: 130 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 189

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            ++  VF G+ +++S++W++++AG V N L   A + F  M    A +++S + SV++ C
Sbjct: 190 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 249

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           A   ELRL  QLH+  LK+    D  +RT  +  Y+KC  M+DA  +F     + +  S+
Sbjct: 250 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL-NRQSY 308

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHIIK 406
            AMI+G+ Q      A+  F ++   G+  +  + S +  A   V       Q++   IK
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
           ++      V  A ++ Y K   L EA +VF+ +  +D V+W+A++A + Q G     + +
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           +  +    ++P+EFTF S++ ACT  S     G + H+  +K+ + +   V  +L+ MYS
Sbjct: 429 FVSMLRSRIEPDEFTFGSILKACTGGSLGY--GMEIHSSIVKSGMASNSSVGCSLIDMYS 486

Query: 527 KKGNIESASEVFKR-------------------QRKRDL-VSWNSMICGYAQHGHTKKAL 566
           K G IE A ++  R                   +R +++ VSWNS+I GY     ++ A 
Sbjct: 487 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +F  M    +  D  T+  V+  C +      G+Q     V +  +   +   S +VD+
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ-IHAQVIKKELQSDVYICSTLVDM 605

Query: 627 YSRAG-------MLEKAM 637
           YS+ G       M EK++
Sbjct: 606 YSKCGDLHDSRLMFEKSL 623



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 245/489 (50%), Gaps = 41/489 (8%)

Query: 190 ADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
           A +G +    Q H  +I +G    T V N L+ +Y  S+    A  VFD M  RD ++WN
Sbjct: 17  AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN 76

Query: 250 SMV-------------------------------AGYVTNELHMEAFETFNNMGLAGAEL 278
            M+                               +GY+ N   +++ E F +MG  G E 
Sbjct: 77  KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 136

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              TF  ++K+C+  ++  L  Q+H  V++ G D D    + L+  Y+K  +  ++ ++F
Sbjct: 137 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 196

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             + E K+ VSW+A+I+G +QN  + LA+ FF +M +     +   Y+ +L +  A+S  
Sbjct: 197 QGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               Q+HAH +K+++     V TA L+ Y K   + +A  +F+  +  +  +++AM+ GY
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +Q      A+ ++ +L S G+  +E + S V  AC A    + +G Q +  +IK+ L+  
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC-ALVKGLSEGLQIYGLAIKSSLSLD 374

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           +CV++A + MY K   +  A  VF   R+RD VSWN++I  + Q+G   + L +F  M R
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-MVDLYSRAGML 633
             +E D  TF  ++ ACT  G +  G +    +V       +     C ++D+YS+ GM+
Sbjct: 435 SRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSG--MASNSSVGCSLIDMYSKCGMI 491

Query: 634 EKAMDIINR 642
           E+A  I +R
Sbjct: 492 EEAEKIHSR 500



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 190/408 (46%), Gaps = 47/408 (11%)

Query: 290 CATTKELRLARQLHS------------------QVLKNGIDF-------------DHNIR 318
           CA    L L +Q H+                  QV  N  DF             D    
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             ++  YSK   M  A+  F+MM  ++DVVSW +M+SG+LQNG    ++  F  M REG+
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMM-PVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 134

Query: 379 RPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
             +G T++IIL      +      Q+H  +++   +      +ALL+ Y K     E+ +
Sbjct: 135 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VF+ I EK+ V+WSA++AG  Q      A+K ++++       ++  ++SV+ +C A S 
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS- 253

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +  G Q HA ++K+       V +A + MY+K  N++ A  +F      +  S+N+MI 
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 313

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           GY+Q  H  KAL +F  +    L FD I+  GV  AC     + EG Q + + +      
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK----- 368

Query: 615 PTMEHYSCM----VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            ++    C+    +D+Y +   L +A  + + M     A  W  ++AA
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 415



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 33/200 (16%)

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWN 550
           A   A+E GKQ HA  I +       V + L+ +Y+   +  SAS VF +   RD+VSWN
Sbjct: 17  AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN 76

Query: 551 SMICGYA-------------------------------QHGHTKKALEVFKEMRRQDLEF 579
            MI GY+                               Q+G + K++EVF +M R+ +EF
Sbjct: 77  KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 136

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
           DG TF  ++  C+       G Q   I+V        +   S ++D+Y++     +++ +
Sbjct: 137 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAA-SALLDMYAKGKRFVESLRV 195

Query: 640 INRMPFAASATVWRTVLAAC 659
              +P   S + W  ++A C
Sbjct: 196 FQGIPEKNSVS-WSAIIAGC 214


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 216/562 (38%), Positives = 336/562 (59%), Gaps = 22/562 (3%)

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           LR   QLH++ LK     + ++ T L+  Y++CG +  A ++F  M      VSWTA+I+
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPH-PSTVSWTALIT 145

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS- 414
            ++  G +  AV+        G+RP+ FT   +LTA   V+       + +   ++  + 
Sbjct: 146 AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQ 205

Query: 415 ---VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
              V TA ++ YVK G + +A +VF+ + +KD VAW AM+ GYA  G    A+ ++  + 
Sbjct: 206 SVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQ 265

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGN 530
           +EGV+P+ +  +  ++ACT    A++ G+Q          L+N + + +AL+ MY+K G+
Sbjct: 266 AEGVRPDCYAVAGALSACTR-LGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGS 323

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
              A  VF++ RK+D++ WN+MI G    GH K A  +  +M +  ++ +  TFIG++ +
Sbjct: 324 TAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCS 383

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           CTH GL+ +G++YF  M   +HI P +EHY C+VDL SRAG+L++A  +I+ MP  A+A 
Sbjct: 384 CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAV 443

Query: 651 VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           +   +L  C+              LI L+P +S  YV+LSN+Y+  G W++ A++R  M 
Sbjct: 444 ILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 503

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           ++ V+K    SW+E + K + F  GD SHP S+QIY KL+EL   +K  GY+P T  V+ 
Sbjct: 504 EKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 563

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D++DE KE  L  HSE+LAIAF L+ T  G  +++ KNLRVC DCHT IKLIS++  R+I
Sbjct: 564 DVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITHREI 623

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           +VRD NRFH F++G CSC DYW
Sbjct: 624 IVRDNNRFHCFRDGSCSCNDYW 645



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 159/343 (46%), Gaps = 5/343 (1%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           Q+H   +K        V  +L+++Y +  ++  A+ VFD M    +++W +++  Y+   
Sbjct: 92  QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG 151

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA     N    G      T V V+  CA   +L     +     + GI     + T
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 211

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
             +  Y KCG+M  A ++F  MR+ KD V+W AM+ G+  NG    A++ F  M  EGVR
Sbjct: 212 AAVDLYVKCGEMAKAREVFDKMRD-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVR 270

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF----SVGTALLNAYVKKGILDEAAKV 435
           P+ +  +  L+A   +    +    I+      F     +GTAL++ Y K G   EA  V
Sbjct: 271 PDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVV 330

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + +KDI+ W+AM+ G    G  + A  +  Q+   GVK N+ TF  ++ +CT     
Sbjct: 331 FQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLI 390

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
            +  + FH  +    ++  +     +V + S+ G ++ A ++ 
Sbjct: 391 QDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLI 433



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 167/378 (44%), Gaps = 15/378 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H   +K     + +V TSL+ LY R   +   +RVFD+M   + VSWT+L++ Y  
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMD 149

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  + +       G++P+SFT   VL   A    +AT   V     + G      V
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFV 209

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             A + +Y+K   +  AR VFD M D+D++ W +MV GY +N    EA + F  M   G 
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGV 269

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                     +  C     L L RQ    V  +    +  + T L+  Y+KCG   +A  
Sbjct: 270 RPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWV 329

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQP 393
           +F  MR+ KD++ W AMI G    G    A     QM + GV+ N  T+  +L   T   
Sbjct: 330 VFQQMRK-KDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTG 388

Query: 394 AVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
            +   + + H +   Y  S  +     +++   + G+L EA    +LID+  + A + +L
Sbjct: 389 LIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEA---HQLIDDMPMPANAVIL 445

Query: 452 AGYAQIGDTEGAVKIYRQ 469
                 G   G  KI+R 
Sbjct: 446 ------GALLGGCKIHRN 457



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 157/358 (43%), Gaps = 23/358 (6%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + Q +FD  P  + V +  L+  Y      +EA+++       G+     T   VL  C 
Sbjct: 124 RAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACA 183

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            + D   G  V     + G A+ V V+T+ VDLY++   +   R VFD M + + V+W +
Sbjct: 184 RVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGA 243

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GYA N      L+LF  MQ EG++P+ +  +  L      G +    Q   MV  + 
Sbjct: 244 MVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 303

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 +  ALI MY K     +A  VF  M  +D I WN+M+ G         AF    
Sbjct: 304 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIG 363

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI-----------R 318
            M  +G +L  +TF+ +  LC+ T         H+ ++++G  + HN+            
Sbjct: 364 QMEKSGVKLNDNTFIGL--LCSCT---------HTGLIQDGRRYFHNMTKLYHISPRIEH 412

Query: 319 TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            G +V   S+ G +++A ++   M    + V   A++ G   +   +LA +   Q+ R
Sbjct: 413 YGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIR 470



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 1/167 (0%)

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+  TF   + + +     +  G+Q HA S+K   +    V ++L+T+Y++ G +  A  
Sbjct: 68  PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF        VSW ++I  Y   G  ++A+ V +      +  D  T + V+TAC     
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  G+  +     E  I  ++   +  VDLY + G + KA ++ ++M
Sbjct: 188 LATGETVWRAAEQE-GIAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/683 (34%), Positives = 375/683 (54%), Gaps = 24/683 (3%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDARAV 236
           +S    T+L  L +   +  A+Q+H  V   G     T +   L + Y     +  A+ +
Sbjct: 21  DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD +  ++S  WNSM+ GY  N     A   +  M   G +    T+  V+K C      
Sbjct: 81  FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLR 140

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            + R++H+ V+  G++ D  +   ++  Y K G +E A  +F  M  ++D+ SW  M+SG
Sbjct: 141 EMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRML-VRDLTSWNTMMSG 199

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKS 412
            ++NG    A   F  M R+G   +  T   +L+A   V   +V    H ++++      
Sbjct: 200 FVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGR 259

Query: 413 FSVG---TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
              G    ++++ Y     +  A K+FE +  KD+V+W+++++GY + GD   A++++ +
Sbjct: 260 VCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGR 319

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           +   G  P+E T  SV+ AC   SA +  G    +  +K      + V +AL+ MY+  G
Sbjct: 320 MVVVGAVPDEVTVISVLAACNQISA-LRLGATVQSYVVKRGYVVNVVVGTALIGMYANCG 378

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
           ++  A  VF    +++L +   M+ G+  HG  ++A+ +F EM  + +  D   F  V++
Sbjct: 379 SLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLS 438

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC+H+GLVDEG++ F  M  ++ + P   HYSC+VDL  RAG L++A  +I  M    + 
Sbjct: 439 ACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNE 498

Query: 650 TVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
            VW  +L+ACRL                L P   + YV LSN+YAA   W++   VR L+
Sbjct: 499 DVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALV 558

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
             R+++K   YS++E+    + F  GD SH QS+ IY+KL++L+ +LK AGYKPDTS VL
Sbjct: 559 AKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVL 618

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
            D+++E KE +L  HSERLA+AF L+ T  G  ++I KNLRVCGDCHTVIK+ISKL  R+
Sbjct: 619 YDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNRE 678

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           I++RD  RFHHF++GLCSCG YW
Sbjct: 679 IIMRDICRFHHFRDGLCSCGGYW 701



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 249/495 (50%), Gaps = 14/495 (2%)

Query: 99  QVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           Q+H      G   R+  ++T L   Y    ++   + +FD +   N   W S++ GYA N
Sbjct: 43  QLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACN 102

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
               R L L+ +M   G KP++FT+  VL    D  +     +VH +V+  G E    V 
Sbjct: 103 NSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVG 162

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+++SMY K   V  AR VFD M  RD  +WN+M++G+V N     AFE F +M   G  
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFV 222

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID---FDHNIRTGLMVAYSKCGKMEDA 334
             R+T ++++  C    +L++ +++H  V++NG      +  +   ++  Y  C  +  A
Sbjct: 223 GDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCA 282

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            K+F  +R +KDVVSW ++ISG+ + G    A+  F +M   G  P+  T   +L A   
Sbjct: 283 RKLFEGLR-VKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQ 341

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           +S  +    V ++++K  Y  +  VGTAL+  Y   G L  A +VF+ + EK++ A + M
Sbjct: 342 ISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVM 401

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKA 509
           + G+   G    A+ I+ ++  +GV P+E  F++V++AC+  S  V++GK+ F+  +   
Sbjct: 402 VTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSH-SGLVDEGKEIFYKMTRDY 460

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
            +       S LV +  + G ++ A  V +  + K +   W +++     H + K  L V
Sbjct: 461 SVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVK--LAV 518

Query: 569 FKEMRRQDLEFDGIT 583
               +  +L  DG++
Sbjct: 519 ISAQKLFELNPDGVS 533



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 213/439 (48%), Gaps = 28/439 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q +FD+   +N   +N ++  Y  ++    AL L+L +   G      T   VLK CG L
Sbjct: 78  QHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDL 137

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR+VH   V  G   DV V  S++ +Y +  +VE  R VFD M   ++ SW +++
Sbjct: 138 LLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMM 197

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-- 209
           SG+ +N       E+F  M+ +G   +  T   +L    D   +    ++H  V++NG  
Sbjct: 198 SGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGES 257

Query: 210 GEVVTS-VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G V    + N++I MY   + V  AR +F+G+  +D ++WNS+++GY       +A E F
Sbjct: 258 GRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELF 317

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M + GA     T +SV+  C     LRL   + S V+K G   +  + T L+  Y+ C
Sbjct: 318 GRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANC 377

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +  A ++F  M E K++ + T M++G   +G    A++ F +M  +GV P+   ++ +
Sbjct: 378 GSLVCACRVFDEMPE-KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAV 436

Query: 389 LTAQPAVSPFQVHAHIIKTNYE------KSFSVG------TALLNAYVKKGILDEAAKVF 436
           L+A         H+ ++    E      + +SV       + L++   + G LDEA  V 
Sbjct: 437 LSACS-------HSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVI 489

Query: 437 E---LIDEKDIVAWSAMLA 452
           E   L   +D+  W+A+L+
Sbjct: 490 ENMKLKPNEDV--WTALLS 506


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/688 (36%), Positives = 376/688 (54%), Gaps = 20/688 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K CG L +      VH      GF  D+ V ++L+ LY     + D RRVFD++
Sbjct: 147 TFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDEL 206

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + + + W  +L GY ++   +  +  F  M+      NS T++ +L + A  G      
Sbjct: 207 PQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGT 266

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH +VI +G E    V N L++MY K   + DAR +F+ M   D++TWN ++AGYV N 
Sbjct: 267 QVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNG 326

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   FN M  AG +    TF S +     +  LR  +++HS ++++ + FD  +++
Sbjct: 327 FTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKS 386

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y K G +E A KIF     + DV   TAMISG++ +G    A+N F  + +EG+ 
Sbjct: 387 ALIDIYFKGGDVEMARKIFQQ-NTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMV 445

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           PN  T + +L A  A++      ++H  I+K   E   +VG+A+ + Y K G LD A + 
Sbjct: 446 PNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEF 505

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  + E D + W++M++ ++Q G  E AV ++RQ+   G K +  + SS +++  A   A
Sbjct: 506 FRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSS-AANLPA 564

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +  GK+ H   I+   ++   V+SAL+ MYSK G +  A  VF     ++ VSWNS+I  
Sbjct: 565 LYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAA 624

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HG  ++ L++F EM R  +  D +TF+ +I+AC HAGLV EG  YF  M  E+ I  
Sbjct: 625 YGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGA 684

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            MEHY+CMVDLY RAG L +A D I  MPF   A VW T+L ACR              L
Sbjct: 685 RMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHL 744

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + L P +S  YVLLSN++A  G W    +VR+LM ++ V+K  GYSWI+V   T+ F A 
Sbjct: 745 LELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMFSAA 804

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKP 749
           + +HP+S +IY  L  L   L+  GY P
Sbjct: 805 EGNHPESVEIYLILNSLLLELRKQGYVP 832



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 164/565 (29%), Positives = 286/565 (50%), Gaps = 8/565 (1%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQVH + +  G +    +S+ ++ LY+    + DG  +F  +   N + W  ++ G    
Sbjct: 64  RQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYML 123

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
              D  L  + +M    + P+ +TF  V+        V   + VH      G  V   V 
Sbjct: 124 GWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVG 183

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           +ALI +Y  +  + DAR VFD +  RD+I WN M+ GYV +     A  TF  M  + + 
Sbjct: 184 SALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSM 243

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           +   T+  ++ +CAT  +  L  Q+H  V+ +G +FD  +   L+  YSKCG + DA K+
Sbjct: 244 VNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKL 303

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ M +  D V+W  +I+G++QNG  D A   F  M   GV+P+  T++  L +      
Sbjct: 304 FNTMPQ-TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGS 362

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                +VH++I++        + +AL++ Y K G ++ A K+F+     D+   +AM++G
Sbjct: 363 LRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISG 422

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y   G    A+  +R L  EG+ PN  T +SV+ A  A  AA++ GK+ H   +K +L N
Sbjct: 423 YVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPA-CAALAALKLGKELHCDILKKQLEN 481

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + V SA+  MY+K G ++ A E F+R  + D + WNSMI  ++Q+G  + A+++F++M 
Sbjct: 482 IVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMG 541

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
               +FD ++    +++  +   +  G++    ++       T    S ++D+YS+ G L
Sbjct: 542 MSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVA-SALIDMYSKCGKL 600

Query: 634 EKAMDIINRMPFAASATVWRTVLAA 658
             A  + N M    +   W +++AA
Sbjct: 601 ALARCVFNLMA-GKNEVSWNSIIAA 624



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 275/557 (49%), Gaps = 20/557 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  PQR+ + +N +L  Y +      A+  F G+R     +   T + +L  C     
Sbjct: 202 VFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGK 261

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G QVH   + SGF  D  V+ +LV +Y +  N+ D R++F+ M +++ V+W  L++G
Sbjct: 262 FCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAG 321

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y +N   D    LF+ M   G+KP+S TF++ L  + + G +    +VH+ ++++     
Sbjct: 322 YVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFD 381

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + +ALI +Y K   V  AR +F      D     +M++GYV + L+++A  TF  +  
Sbjct: 382 VYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQ 441

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G      T  SV+  CA    L+L ++LH  +LK  ++   N+ + +   Y+KCG+++ 
Sbjct: 442 EGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDL 501

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A + F  M E  D + W +MIS   QNG  ++AV+ F QM   G + +  + S  L++  
Sbjct: 502 AYEFFRRMSE-TDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAA 560

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            +       ++H ++I+  +     V +AL++ Y K G L  A  VF L+  K+ V+W++
Sbjct: 561 NLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNS 620

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC---- 505
           ++A Y   G     + ++ ++   GV P+  TF  +I+AC   +  V +G  +  C    
Sbjct: 621 IIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISAC-GHAGLVGEGIHYFHCMTRE 679

Query: 506 -SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTK 563
             I A++ +  C    +V +Y + G +  A +  K      D   W +++     HG+  
Sbjct: 680 YGIGARMEHYAC----MVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGN-- 733

Query: 564 KALEVFKEMRRQDLEFD 580
             +E+ K   R  LE D
Sbjct: 734 --VELAKLASRHLLELD 748



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 211/455 (46%), Gaps = 27/455 (5%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLP----LFGSTLSSVLKT 87
           + LF+  PQ + V +N L+  Y ++    EA  LF  +   G+      F S L S+L++
Sbjct: 301 RKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILES 360

Query: 88  CGCLFDHVFGRQVHCECVKSGFAR-----DVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
                    G   HC+ V S   R     DV + ++L+D+Y +  +VE  R++F      
Sbjct: 361 ---------GSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLV 411

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +V   T+++SGY  + +N   +  F  +  EG+ PNS T ++VL   A    +    ++H
Sbjct: 412 DVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELH 471

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
             ++K   E + +V +A+  MY K   +  A   F  M + DSI WNSM++ +  N    
Sbjct: 472 CDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPE 531

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            A + F  MG++GA+    +  S +   A    L   +++H  V++N    D  + + L+
Sbjct: 532 MAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALI 591

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YSKCGK+  A  +F++M   K+ VSW ++I+ +  +G     ++ F +M R GV P+ 
Sbjct: 592 DMYSKCGKLALARCVFNLMAG-KNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDH 650

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG------TALLNAYVKKGILDEAAKVF 436
            T+ +I++A           H       + + +G        +++ Y + G L EA    
Sbjct: 651 VTFLVIISACGHAGLVGEGIHYFHC-MTREYGIGARMEHYACMVDLYGRAGRLHEAFDAI 709

Query: 437 ELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           + +    D   W  +L      G+ E A    R L
Sbjct: 710 KSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHL 744


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/661 (34%), Positives = 370/661 (55%), Gaps = 25/661 (3%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS--ITWNSMVAGY 255
           A Q+H+ ++        +  N L+ +Y K   +     +F+      +  +TW +++   
Sbjct: 116 ATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQL 175

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
             +    +A   FN M   G      TF +++  CA    L   +Q+H+ + K+    D 
Sbjct: 176 SRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDP 235

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + T L+  Y+KCG M  A  +F  M   +++VSW +MI G ++N     A+  F ++  
Sbjct: 236 FVATALLDMYAKCGSMLLAENVFDEMPH-RNLVSWNSMIVGFVKNKLYGRAIGVFREVLS 294

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
            G  P+  + S +L+A   +       QVH  I+K        V  +L++ Y K G+ ++
Sbjct: 295 LG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFED 352

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A K+F    ++D+V W+ M+ G  +  + E A   ++ +  EGV+P+E ++SS+ +A +A
Sbjct: 353 ATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHA-SA 411

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
             AA+ QG   H+  +K        +SS+LVTMY K G++  A +VF+  ++ ++V W +
Sbjct: 412 SIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTA 471

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           MI  + QHG   +A+++F+EM  + +  + ITF+ V++AC+H G +D+G +YF+ M N H
Sbjct: 472 MITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVH 531

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------------ 659
           +I P +EHY+CMVDL  R G LE+A   I  MPF   + VW  +L AC            
Sbjct: 532 NIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREV 591

Query: 660 --RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS 717
             RL  L+P +   Y+LLSN+Y   G  +E   VR+LM    V+KE+G SWI+VKN+T+ 
Sbjct: 592 AERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFV 651

Query: 718 FLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIA 777
           F A D SH ++ +IY  L++L   +K  GY  +T +    ++   ++++   HSE+LA+A
Sbjct: 652 FNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSEEQSLWC-HSEKLALA 710

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           FGL+  P G+P++I KNLR CGDCHTV+K  S++ +R+I+VRD NRFH F  G CSC DY
Sbjct: 711 FGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDY 770

Query: 838 W 838
           W
Sbjct: 771 W 771



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 207/442 (46%), Gaps = 17/442 (3%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
           P  N V +  L+ +  R +   +AL  F  +R  G+     T S++L  C        G+
Sbjct: 161 PSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQ 220

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H    K  F  D  V+T+L+D+Y +  ++     VFD+M   N+VSW S++ G+ +NK
Sbjct: 221 QIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNK 280

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           +  R + +F   +V  + P+  + S+VL   A    +    QVH  ++K G   +  V N
Sbjct: 281 LYGRAIGVFR--EVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKN 338

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +L+ MY K  +  DA  +F G  DRD +TWN M+ G        +A   F  M   G E 
Sbjct: 339 SLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEP 398

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
             +++ S+    A+   L     +HS VLK G   +  I + L+  Y KCG M DA ++F
Sbjct: 399 DEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVF 458

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
              +E  +VV WTAMI+   Q+G  + A+  F +M  EGV P   T+  +L+A       
Sbjct: 459 RETKE-HNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKI 517

Query: 399 Q---------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWS 448
                      + H IK   E        +++   + G L+EA +  E +  E D + W 
Sbjct: 518 DDGFKYFNSMANVHNIKPGLEHY----ACMVDLLGRVGRLEEACRFIESMPFEPDSLVWG 573

Query: 449 AMLAGYAQIGDTEGAVKIYRQL 470
           A+L    +  + E   ++  +L
Sbjct: 574 ALLGACGKHANVEMGREVAERL 595



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 165/341 (48%), Gaps = 13/341 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++FD  P RN V +N ++  + ++ L+  A+ +F  +  LG      ++SSVL  C  L
Sbjct: 255 ENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQV--SISSVLSACAGL 312

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +  FG+QVH   VK G    V V  SLVD+Y +    ED  ++F    + +VV+W  ++
Sbjct: 313 VELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMI 372

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G  R +  ++    F  M  EG++P+  ++S++    A    +     +H+ V+K G  
Sbjct: 373 MGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHV 432

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             + + ++L++MY K   + DA  VF   ++ + + W +M+  +  +    EA + F  M
Sbjct: 433 KNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEM 492

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL-----MV-AY 325
              G      TFVSV+  C+ T ++    +       N +   HNI+ GL     MV   
Sbjct: 493 LNEGVVPEYITFVSVLSACSHTGKIDDGFKYF-----NSMANVHNIKPGLEHYACMVDLL 547

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            + G++E+A +    M    D + W A++    ++  +++ 
Sbjct: 548 GRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMG 588


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 243/677 (35%), Positives = 376/677 (55%), Gaps = 30/677 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLY--MRTNNVEDGRRVFDDMNES--NVVSWTSLLS 152
           G  +H   +KSG A    V+ SL++ Y  +    +     VFDD+  +  +V SW SLL+
Sbjct: 31  GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLN 90

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
             +R++  D +      +    + P+  +F+      A           H +  K    V
Sbjct: 91  PLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAV 150

Query: 213 V-TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               VC +L++MY K  +V DAR +FDGM  R+S +W++MVAGY   +   EAF+ F  M
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 210

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRL--ARQLHSQVLKNGI-DFDHNIRTGLMVAYSKC 328
            L      +S FV+   L A +  L L    Q+H  ++K+G+ DF  ++   L+  Y+K 
Sbjct: 211 -LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFV-SVENSLVTMYAKA 268

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G M  A  +F   RE ++ ++W+AMI+G+ QNG  D AV+ F QM   G  P  FT+  +
Sbjct: 269 GCMGAAFHVFESSRE-RNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGV 327

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A   +       Q H  ++K  +E    V +AL++ Y K G + +A + F+ + E DI
Sbjct: 328 LNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDI 387

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V W+AM++G+ Q G+ E A+ +Y ++  EG+ P++ T +S + AC A  AA+E GKQ H 
Sbjct: 388 VLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRAC-AGIAALEPGKQLHT 446

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             +K  L     V SAL TMYSK GN+E    VF+R   RD+++WNS+I G++Q+G    
Sbjct: 447 QIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNG 506

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           AL++F+EM+ +    D ITFI ++ AC+H GLVD G +YF +M  ++ + P ++HY+CMV
Sbjct: 507 ALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMV 566

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSA 670
           D+ SRAGML++A D I  +       +WR VL AC              RL+ L   DS+
Sbjct: 567 DILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSS 626

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            Y+LLSN+YA+   W +  RVR LM  R V K+ G SW+E+ ++ + F+ G+  HP++  
Sbjct: 627 AYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAEN 686

Query: 731 IYSKLEELSTRLKDAGY 747
           I ++L  L+  +KD GY
Sbjct: 687 INAQLRRLAKHMKDEGY 703



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 189/363 (52%), Gaps = 10/363 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS-----SVLKTC 88
           +FD  PQRN   ++ ++  Y  +   +EA +LF    RL L    S  S     +VL   
Sbjct: 175 MFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLF----RLMLEECPSEKSEFVATAVLSAV 230

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                 + G Q+H   VK G    V+V  SLV +Y +   +     VF+   E N ++W+
Sbjct: 231 SVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWS 290

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++GYA+N   D  + +F +M   G  P  FTF  VL   +D G +A   Q H +++K 
Sbjct: 291 AMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKL 350

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G EV   V +AL+ MY K   + DA+  FD + + D + W +MV+G+V N  H EA   +
Sbjct: 351 GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLY 410

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G   ++ST  S ++ CA    L   +QLH+Q++K G+     + + L   YSKC
Sbjct: 411 ARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKC 470

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +ED   +F  + + +DV++W ++ISG  QNG  + A++ F +M  EG  P+  T+  I
Sbjct: 471 GNLEDGMSVFRRIPD-RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINI 529

Query: 389 LTA 391
           L A
Sbjct: 530 LCA 532



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 132/258 (51%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+ S +RN + ++ ++  Y ++     A+++F  +   G      T   VL     L  
Sbjct: 277 VFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 336

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q H   VK GF   + V ++LVD+Y +   + D +  FD + E ++V WT+++SG
Sbjct: 337 LAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSG 396

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +N  ++  L L+ RM  EGI P+  T ++ L   A    +    Q+HT ++K G  + 
Sbjct: 397 HVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLG 456

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +AL +MY K   + D  +VF  + DRD I WNS+++G+  N     A + F  M +
Sbjct: 457 APVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKM 516

Query: 274 AGAELTRSTFVSVIKLCA 291
            G      TF++++  C+
Sbjct: 517 EGTIPDNITFINILCACS 534



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 99/176 (56%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD+  + + V +  ++  + ++  H+EAL L+  + + G+    ST++S L+ C  +   
Sbjct: 379 FDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL 438

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+Q+H + VK G      V ++L  +Y +  N+EDG  VF  + + +V++W S++SG+
Sbjct: 439 EPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGF 498

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++N   +  L+LF  M++EG  P++ TF  +L   +  G+V    +  +++ K+ G
Sbjct: 499 SQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYG 554


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/561 (37%), Positives = 336/561 (59%), Gaps = 20/561 (3%)

Query: 296  LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
            L   RQ+H Q   +G+  +  +   L+  YS    ++DA  +F  M  ++D VSW+ M+ 
Sbjct: 751  LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMC-VRDSVSWSVMVG 809

Query: 356  GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEK 411
            G  + G        F ++ R G RP+ +T   ++ A   +   Q    +H  + K   + 
Sbjct: 810  GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869

Query: 412  SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
               V  AL++ Y K   +++A  +F+ + E+D+V W+ M+ GYA+ G+   ++ ++ ++ 
Sbjct: 870  DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929

Query: 472  SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
             EGV P++    +V+ AC A   A+ + +       + K    + + +A++ M++K G +
Sbjct: 930  EEGVVPDKVAMVTVVFAC-AKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 988

Query: 532  ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
            ESA E+F R  +++++SW++MI  Y  HG  +KAL++F  M R  +  + IT + ++ AC
Sbjct: 989  ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 1048

Query: 592  THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
            +HAGLV+EG ++F  M  ++ +   ++HY+C+VDL  RAG L++A+ +I  M       +
Sbjct: 1049 SHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGL 1108

Query: 652  WRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
            W   L ACR              L+ LQP +   Y+LLSN+YA  G W++ A++R LM+ 
Sbjct: 1109 WGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQ 1168

Query: 698  RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
            R++KK  G++WIEV NK++ F  GD +HP+S +IY  L+ L  +L+  GY PDT++VL D
Sbjct: 1169 RRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHD 1228

Query: 758  IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
            +D+E K  IL  HSE+LAIAFGL+ATP   P++I+KNLRVCGDCHT  KL+S +  R I+
Sbjct: 1229 VDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVII 1288

Query: 818  VRDTNRFHHFKEGLCSCGDYW 838
            VRD NRFHHFKEG CSCGDYW
Sbjct: 1289 VRDANRFHHFKEGACSCGDYW 1309



 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 186/537 (34%), Positives = 308/537 (57%), Gaps = 23/537 (4%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L    ++S +  C   + L   RQ+H+Q   +G+  +  +   L+  YS    ++DA  +
Sbjct: 60  LNPKFYISALVNC---RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGL 116

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M  ++D VSW+ M+ G  + G        F ++ R G RP+ +T   ++ A   +  
Sbjct: 117 FDGMC-VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 175

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            Q    +H  + K   +    V  AL++ YVK   +++A  +F+ + E+D+V W+ M+ G
Sbjct: 176 LQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGG 235

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           YA+ G    ++ ++ ++  EGV P++    +V+ AC A   A+ + +       + K   
Sbjct: 236 YAECGKANESLVLFEKMREEGVVPDKVAMVTVVFAC-AKLGAMHKARIIDDYIQRKKFQL 294

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            + + +A++ MY+K G +ESA E+F R  +++++SW++MI  Y  HG  +KAL++F  M 
Sbjct: 295 DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMML 354

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +  D IT   ++ AC+HAGLV+EG ++F  M  ++ +   ++HY+C+VDL  RAG L
Sbjct: 355 SSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRL 414

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
           ++A+ +I  M       +W   L ACR              L+ LQ  +   YVLLSN+Y
Sbjct: 415 DEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIY 474

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A  G W++ A++R LM+ R++KK  G++WIEV NK++ F  GD +HP+S +IY  L+ LS
Sbjct: 475 ANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLS 534

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLR 796
            +L+  GY PDT++VL D+D+E K  IL  HSE+LAIAFGL+ATP   P++I+KNLR
Sbjct: 535 NKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 184/349 (52%), Gaps = 15/349 (4%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH     +G      V N LI  Y   + + DA  +FDGM  RDS++W+ MV G+    
Sbjct: 80  QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 139

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            ++  F TF  +   GA     T   VI+ C   K L++ R +H  V K G+D DH +  
Sbjct: 140 DYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 199

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y KC ++EDA  +F  M+E +D+V+WT MI G+ + G  + ++  F +M  EGV 
Sbjct: 200 ALVDMYVKCREIEDARFLFDKMQE-RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 258

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+      ++ A   +        +  +I +  ++    +GTA+++ Y K G ++ A ++
Sbjct: 259 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 318

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ ++EK++++WSAM+A Y   G    A+ ++  + S G+ P++ T +S++ AC+  +  
Sbjct: 319 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSH-AGL 377

Query: 496 VEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           VE+G +F +      S++  + +  CV    V +  + G ++ A ++ K
Sbjct: 378 VEEGLRFFSSMWEDYSVRTDVKHYTCV----VDLLGRAGRLDEALKLIK 422



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 178/344 (51%), Gaps = 15/344 (4%)

Query: 200  QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            QVH     +G      V N L+  Y   + + DA  +FDGM  RDS++W+ MV G+    
Sbjct: 756  QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 815

Query: 260  LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
             +M  F TF  +   GA     T   VI+ C   K L++ R +H  V K G+D DH +  
Sbjct: 816  DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 875

Query: 320  GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
             L+  Y KC ++EDA  +F  M E +D+V+WT MI G+ + G  + ++  F +M  EGV 
Sbjct: 876  ALVDMYGKCREIEDARFLFDKMXE-RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934

Query: 380  PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
            P+      ++ A   +        +  +I +  ++    +GTA+++ + K G ++ A ++
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994

Query: 436  FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
            F+ ++EK++++WSAM+A Y   G    A+ ++  +   G+ PN+ T  S++ AC+  +  
Sbjct: 995  FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSH-AGL 1053

Query: 496  VEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESA 534
            VE+G +F +      S++  + +  CV    V +  + G ++ A
Sbjct: 1054 VEEGLRFFSXMWEDYSVRXDVKHYTCV----VDLLGRAGRLDEA 1093



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 170/363 (46%), Gaps = 9/363 (2%)

Query: 98   RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
            RQVH +    G  +++ V+  LV  Y     ++D   +FD M   + VSW+ ++ G+A+ 
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 158  KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                     F  +   G +P+++T   V+    D   +     +H +V K G ++   VC
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 218  NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
             AL+ MY K + + DAR +FD M +RD +TW  M+ GY       E+   F+ M   G  
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934

Query: 278  LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
              +   V+V+  CA    +  AR +   + +     D  + T ++  ++KCG +E A +I
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREI 994

Query: 338  FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
            F  M E K+V+SW+AMI+ +  +G    A++ F  M R G+ PN  T   +L A      
Sbjct: 995  FDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 1053

Query: 398  FQVHAHIIKTNYEKSFSVG------TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAM 450
             +         +E  +SV       T +++   + G LDEA K +  +  EKD   W A 
Sbjct: 1054 VEEGLRFFSXMWE-DYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAF 1112

Query: 451  LAG 453
            L  
Sbjct: 1113 LGA 1115



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 172/363 (47%), Gaps = 9/363 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           RQVH +    G   ++ V+  L+  Y     ++D   +FD M   + VSW+ ++ G+A+ 
Sbjct: 79  RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                    F  +   G +P+++T   V+    D   +     +H +V K G ++   VC
Sbjct: 139 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 198

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            AL+ MY+K + + DAR +FD M++RD +TW  M+ GY       E+   F  M   G  
Sbjct: 199 AALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 258

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             +   V+V+  CA    +  AR +   + +     D  + T ++  Y+KCG +E A +I
Sbjct: 259 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 318

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M E K+V+SW+AMI+ +  +G    A++ F  M   G+ P+  T + +L A      
Sbjct: 319 FDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGL 377

Query: 398 FQVHAHIIKTNYEKSFSVG------TALLNAYVKKGILDEAAKVFE-LIDEKDIVAWSAM 450
            +       + +E  +SV       T +++   + G LDEA K+ + +  EKD   W A 
Sbjct: 378 VEEGLRFFSSMWE-DYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAF 436

Query: 451 LAG 453
           L  
Sbjct: 437 LGA 439



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 162/345 (46%), Gaps = 25/345 (7%)

Query: 26  FYSKKDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS 83
           +Y   D +  LFD    R+ V ++ ++  + +   +      F  + R G      TL  
Sbjct: 106 YYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPF 165

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           V++ C  L +   GR +H    K G   D  V  +LVD+Y++   +ED R +FD M E +
Sbjct: 166 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 225

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           +V+WT ++ GYA     +  L LF +M+ EG+ P+     TV+   A  G +  A  +  
Sbjct: 226 LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 285

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
            + +   ++   +  A+I MY K   V  AR +FD ME+++ I+W++M+A Y  +    +
Sbjct: 286 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 345

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNI 317
           A + F  M  +G    + T  S++  C+           H+ +++ G+ F      D+++
Sbjct: 346 ALDLFPMMLSSGMLPDKITLASLLYACS-----------HAGLVEEGLRFFSSMWEDYSV 394

Query: 318 RTG------LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           RT       ++    + G++++A K+   M   KD   W A +  
Sbjct: 395 RTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGA 439



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 166/355 (46%), Gaps = 25/355 (7%)

Query: 26   FYSKKDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS 83
            +Y   D +  LFD    R+ V ++ ++  + +   +      F  + R G      TL  
Sbjct: 782  YYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPF 841

Query: 84   VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
            V++ C  L +   GR +H    K G   D  V  +LVD+Y +   +ED R +FD M E +
Sbjct: 842  VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERD 901

Query: 144  VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
            +V+WT ++ GYA     +  L LF +M+ EG+ P+     TV+   A  G +  A  +  
Sbjct: 902  LVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDD 961

Query: 204  MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
             + +   ++   +  A+I M+ K   V  AR +FD ME+++ I+W++M+A Y  +    +
Sbjct: 962  YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 1021

Query: 264  AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNI 317
            A + F  M  +G    + T VS++  C+           H+ +++ G+ F      D+++
Sbjct: 1022 ALDLFPMMLRSGILPNKITLVSLLYACS-----------HAGLVEEGLRFFSXMWEDYSV 1070

Query: 318  R------TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            R      T ++    + G++++A K+   M   KD   W A +     +  + LA
Sbjct: 1071 RXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLA 1125


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 257/814 (31%), Positives = 428/814 (52%), Gaps = 68/814 (8%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDM 139
           S LK C  + D +  +  H    K G   DV+  T LV         E     + VF++ 
Sbjct: 37  SSLKNCKTI-DEL--KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93

Query: 140 NE-SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
                   + SL+ GYA + + +  + LF RM   GI P+ +TF   L   A        
Sbjct: 94  ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +Q+H +++K G      V N+L+  Y +   +  AR VFD M +R+ ++W SM+ GY   
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213

Query: 259 ELHMEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           +   +A + F  M +   E+T +  T V VI  CA  ++L    ++++ +  +GI+ +  
Sbjct: 214 DFAKDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           + + L+  Y KC  ++ A ++F       ++    AM S +++ G    A+  F  M   
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331

Query: 377 GVRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLN-------- 421
           GVRP+  +   +L+A  + S  +        H ++++  +E   ++  AL++        
Sbjct: 332 GVRPDRIS---MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388

Query: 422 -----------------------AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
                                   YV+ G +D A + FE + EK+IV+W+ +++G  Q  
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448

Query: 459 DTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
             E A++++  + S EGV  +  T  S+ +AC     A++  K  +    K  +   + +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASAC-GHLGALDLAKWIYYYIEKNGIQLDVRL 507

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            + LV M+S+ G+ ESA  +F     RD+ +W + I   A  G+ ++A+E+F +M  Q L
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + DG+ F+G +TAC+H GLV +G++ F  M+  H + P   HY CMVDL  RAG+LE+A+
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627

Query: 638 DIINRMPFAASATVWRTVLAACRLIS--------------LQPHDSAIYVLLSNMYAATG 683
            +I  MP   +  +W ++LAACR+                L P  +  YVLLSN+YA+ G
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W + A+VR  M ++ ++K  G S I+++ KT+ F +GD SHP+   I + L+E+S R  
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
             G+ PD S VL D+D++ K  +LS+HSE+LA+A+GL+++  G  ++IVKNLRVC DCH+
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
             K  SK+  R+I++RD NRFH+ ++G CSCGD+
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 262/559 (46%), Gaps = 41/559 (7%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           YN L+  Y    L  EA+ LFL +   G+     T    L  C        G Q+H   V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K G+A+D+ V  SLV  Y     ++  R+VFD+M+E NVVSWTS++ GYAR       ++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221

Query: 166 LFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
           LF RM + E + PNS T   V+   A    + T  +V+  +  +G EV   + +AL+ MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
           +K   +  A+ +FD     +    N+M + YV   L  EA   FN M  +G    R + +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           S I  C+  + +   +  H  VL+NG +   NI   L+  Y KC + + A +IF  M   
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN- 400

Query: 345 KDVVSWTAMISGHLQNGAIDL-------------------------------AVNFFCQM 373
           K VV+W ++++G+++NG +D                                A+  FC M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460

Query: 374 -TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
            ++EGV  +G T   I +A   +        ++ +I K   +    +GT L++ + + G 
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
            + A  +F  +  +D+ AW+A +   A  G+ E A++++  +  +G+KP+   F   + A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQ-RKRDL 546
           C+     V+QGK+     +K    +   V    +V +  + G +E A ++ +    + + 
Sbjct: 581 CSH-GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639

Query: 547 VSWNSMICGYAQHGHTKKA 565
           V WNS++      G+ + A
Sbjct: 640 VIWNSLLAACRVQGNVEMA 658



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 220/478 (46%), Gaps = 54/478 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGC 90
           + +FD   +RN V +  ++  Y R    ++A++LF   +R   +     T+  V+  C  
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G +V+     SG   +  + ++LVD+YM+ N ++  +R+FD+   SN+    ++
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            S Y R  +    L +F+ M   G++P+  +  + +   +    +      H  V++NG 
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E   ++CNALI MY+K      A  +FD M ++  +TWNS+VAGYV N     A+ETF  
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428

Query: 271 M-------------GLAGAELTRS-------------------TFVSVIKLCATTKELRL 298
           M             GL    L                      T +S+   C     L L
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
           A+ ++  + KNGI  D  + T L+  +S+CG  E A  IF+ +   +DV +WTA I    
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMA 547

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV--- 415
             G  + A+  F  M  +G++P+G  +   LTA         H  +++   E  +S+   
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS-------HGGLVQQGKEIFYSMLKL 600

Query: 416 -GTA--------LLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGA 463
            G +        +++   + G+L+EA ++ E +  E + V W+++LA     G+ E A
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/596 (38%), Positives = 344/596 (57%), Gaps = 40/596 (6%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC------------ 328
           ++  + +K CA      LA  LH+  +++G   D      L+    K             
Sbjct: 50  ASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGP 109

Query: 329 ---GKMEDAS-----KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
              G +E A+     K+F  M E +D VSW  +I G  ++     A++   +M R+G  P
Sbjct: 110 SGEGGLESAAYESMRKVFDEMLE-RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMP 168

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + FT S +L      +  +    VH + IK  ++    VG++L++ Y     +D + KVF
Sbjct: 169 DTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVF 228

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           +   + D V W++MLAGYAQ G  E A+ I+R++   GV+P   TFSS+I A    S  +
Sbjct: 229 DSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSL-L 287

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
             GKQ HA  I+A+ N+ + +SS+L+ MY K GN++ A  VF   +  D+VSW +MI GY
Sbjct: 288 RLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGY 347

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A HG T +A  +F+ M   +++ + ITF+ V+TAC+HAGLVD G +YF+ M N++   P+
Sbjct: 348 ALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPS 407

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LI 662
           +EH + + D   RAG L++A + I+ M    +++VW T+L ACR              + 
Sbjct: 408 LEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIF 467

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            L+P     +V+LSNMY+A+G W E A++RK M  + +KKE   SWIEVKNK + F+A D
Sbjct: 468 ELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHD 527

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
            SHP  ++I   L   S ++   GY P+   VLQDI++E K  +L  HSE+LAI FG+++
Sbjct: 528 KSHPWYDRIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIIS 587

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           TP G  ++++KNLRVC DCH   K ISK+  R+IVVRD NRFH FK+G CSCGD+W
Sbjct: 588 TPPGTTIRVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 235/513 (45%), Gaps = 66/513 (12%)

Query: 62  ALNLFLGIR-----RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVS 116
           A++LFL +R     R  +P   ++L + LK+C  L        +H   ++SG   D   +
Sbjct: 31  AISLFLQMRASVAPRSSVP---ASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTA 87

Query: 117 TSLVDLYMR---------TNN-----------VEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            +L++L ++         TN             E  R+VFD+M E + VSW +L+ G A 
Sbjct: 88  NALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAE 147

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           +K +   L +   M  +G  P++FT STVL + A+   +   + VH   IKNG +    V
Sbjct: 148 HKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFV 207

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++LI MY     +  +  VFD   D D++ WNSM+AGY  N    EA   F  M  AG 
Sbjct: 208 GSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGV 267

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                TF S+I        LRL +QLH+ +++   + +  I + L+  Y KCG ++ A +
Sbjct: 268 RPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARR 327

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F+ ++   D+VSWTAMI G+  +G    A   F +M    V+PN  T+  +LTA     
Sbjct: 328 VFNGIQS-PDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACS--- 383

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
               HA ++   + K F+   ++ N Y     L+  A + + +                +
Sbjct: 384 ----HAGLVDNGW-KYFN---SMSNQYGFVPSLEHCAALADTL---------------GR 420

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV---EQGKQFHACSIKAKLNN 513
            GD + A   Y  ++   +KP    +S+++ AC      V   E  K+      K+  ++
Sbjct: 421 AGDLDEA---YNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSH 477

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
            +     L  MYS  G    A+++ K  R + +
Sbjct: 478 VI-----LSNMYSASGRWNEAAQLRKSMRIKGM 505



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 185/409 (45%), Gaps = 41/409 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   +R+ V +N L+        HQEAL++   + R G      TLS+VL      
Sbjct: 124 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC 183

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   G  VH   +K+GF  DV V +SL+D+Y     ++   +VFD  ++ + V W S+L
Sbjct: 184 ADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSML 243

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYA+N   +  L +F RM   G++P   TFS+++    +  ++    Q+H  +I+    
Sbjct: 244 AGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFN 303

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               + ++LI MY K   V  AR VF+G++  D ++W +M+ GY  +    EAF  F  M
Sbjct: 304 DNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERM 363

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI--RTGLMVAYSKCG 329
            L   +    TF++V+  C+           H+ ++ NG  + +++  + G + +   C 
Sbjct: 364 ELGNVKPNHITFLAVLTACS-----------HAGLVDNGWKYFNSMSNQYGFVPSLEHCA 412

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            + D                         + G +D A NF  +M    ++P    +S +L
Sbjct: 413 ALADTLG----------------------RAGDLDEAYNFISEMK---IKPTSSVWSTLL 447

Query: 390 TAQPAVSPFQVHAHIIKTNYE---KSFSVGTALLNAYVKKGILDEAAKV 435
            A        +   + K  +E   KS      L N Y   G  +EAA++
Sbjct: 448 RACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQL 496


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/714 (34%), Positives = 379/714 (53%), Gaps = 60/714 (8%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           FS++   LA         ++H+++I  G          LI+ Y   +    + +VF    
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 242 DRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
             +++  WNS++     N L  EA   ++       +    TF SVI  CA   +  +A+
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +H +VL  G   D  I   L+  Y +   ++ A K+F  M  ++DVVSW ++ISG+  N
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEM-PLRDVVSWNSLISGYNAN 194

Query: 361 G----AIDL---AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY 409
           G    A+++   ++  F +M  +  +P+  T + IL A   +   +    VH ++I + Y
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 253

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR- 468
           E   +    L+N Y K G L  + +VF  +  KD V+W++M+  Y Q G    ++K++  
Sbjct: 254 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFEN 313

Query: 469 ------------------------------QLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
                                         ++ +EGV P+  T  S++  C+   AA  Q
Sbjct: 314 MKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLL-AAKRQ 372

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           GK+ H C  K  L + + V + L+ MYSK G++ ++ +VFK  + +D+V+W ++I     
Sbjct: 373 GKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGM 432

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           +G  KKA+  F EM    +  D + F+ +I AC+H+GLV+EG  YF  M  ++ I P +E
Sbjct: 433 YGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIE 492

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISL 664
           HY+C+VDL SR+ +L+KA D I  MP    +++W  +L+ACR+              I L
Sbjct: 493 HYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIEL 552

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P D+  YVL+SN+YAA G W +   +RK +  R +KK+ G SW+E++NK Y F  G   
Sbjct: 553 NPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKF 612

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
             Q  ++   L  L+  +   GY  +  +VL DID++ K  IL  HSERLAIAFGL+ T 
Sbjct: 613 FEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTK 672

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G PLQ++KNLRVC DCHTV K ISK+ +R+++VRD NRFH FK+G CSCGDYW
Sbjct: 673 PGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 243/516 (47%), Gaps = 47/516 (9%)

Query: 38  SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           SP  N   +N ++     + L  EAL+L+   +R+ L     T  SV+  C  L D    
Sbjct: 75  SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H   +  GF  D+ +  +L+D+Y R N+++  R+VF++M   +VVSW SL+SGY  N
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194

Query: 158 KMNDRVLELFHRM------QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
              +  LE++++        V   KP+  T +++L      G +     VH  +I +G E
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYE 254

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T+  N LI+MY K   +  ++ VF GM+ +DS++WNSM+  Y+ N    ++ + F NM
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENM 314

Query: 272 -----------------------GL--------AGAELTRSTFVSVIKLCATTKELRLAR 300
                                  GL         G     +T +S++ +C+     R  +
Sbjct: 315 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 374

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H  + K G++ D  +   L+  YSKCG + ++ ++F +M+  KDVV+WTA+IS     
Sbjct: 375 EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT-KDVVTWTALISACGMY 433

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNY--EKSFSV 415
           G    AV  F +M   G+ P+   +  I+ A      V     + H +K +Y  E     
Sbjct: 434 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 493

Query: 416 GTALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
              +++   +  +LD+A   +  +  + D   W A+L+     GDTE A ++  ++    
Sbjct: 494 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE-- 551

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           + P++  +  +++   A     +Q +     SIKA+
Sbjct: 552 LNPDDTGYYVLVSNIYAALGKWDQVRSIRK-SIKAR 586



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 194/429 (45%), Gaps = 53/429 (12%)

Query: 277 ELTRST-FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           E +R T F S+ +  A+        +LHS ++  G+         L+  Y+       + 
Sbjct: 9   ECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSF 68

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +F +     +V  W ++I     NG    A++ + +  R  ++P+ +T+  ++ A   +
Sbjct: 69  SVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGL 128

Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
             F+    +H  ++   +     +G AL++ Y +   LD+A KVFE +  +D+V+W++++
Sbjct: 129 LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI 188

Query: 452 AGYAQIGDTEGAVKIYRQ---LTSEGV---KPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +GY   G    A++IY Q   L  E V   KP+  T +S++ AC      +E GK  H  
Sbjct: 189 SGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQAC-GHLGDLEFGKYVHDY 247

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            I +        S+ L+ MY+K GN+ ++ EVF   + +D VSWNSMI  Y Q+G    +
Sbjct: 248 MITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDS 307

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM-------- 617
           L+VF+ M+ +D+    IT+  +I +C H+   + G +    M  E  + P M        
Sbjct: 308 LKVFENMKARDI----ITWNTIIASCVHSEDCNLGLRMISRMRTE-GVTPDMATMLSILP 362

Query: 618 ------------EHYSC---------------MVDLYSRAGMLEKAMDIINRMPFAASAT 650
                       E + C               ++++YS+ G L  +  +   M       
Sbjct: 363 VCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMK-TKDVV 421

Query: 651 VWRTVLAAC 659
            W  +++AC
Sbjct: 422 TWTALISAC 430



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 8/166 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI----RRLGLPLFGSTLSSVLKTCG 89
           +F+    R+ + +N ++       +H E  NL L +    R  G+    +T+ S+L  C 
Sbjct: 310 VFENMKARDIITWNTII----ASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCS 365

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     G+++H    K G   DV V   L+++Y +  ++ +  +VF  M   +VV+WT+
Sbjct: 366 LLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTA 425

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           L+S         + +  F  M+  GI P+   F  ++   +  G+V
Sbjct: 426 LISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLV 471



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 35/218 (16%)

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T  S I+   A +A   Q  + H+  I   L++++  S+ L+  Y+   +  S+  VF+ 
Sbjct: 14  TLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRL 73

Query: 541 QRKRDLVS-WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
               + V  WNS+I     +G   +AL ++ E +R  L+ D  TF  VI AC  AGL+D 
Sbjct: 74  ASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLD- 130

Query: 600 GQQYFDIMVNEHHIYPTMEHYS------CMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
               F++  + H     M   S       ++D+Y R   L+KA  +   MP        R
Sbjct: 131 ----FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL-------R 179

Query: 654 TVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARV 691
            V++   LIS               Y A G+W E   +
Sbjct: 180 DVVSWNSLIS--------------GYNANGYWNEALEI 203


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/532 (41%), Positives = 319/532 (59%), Gaps = 20/532 (3%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           ++  Y +   ME A   F  M  +KD  SW  MI+G  QN  +D A + F  M  + V  
Sbjct: 44  MLSCYVRNSNMERAQAFFEDM-PIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNV-- 100

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
              T++ +++             + +    KS    TA++  Y+K G +  A ++FE + 
Sbjct: 101 --VTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMP 158

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           EK++V W+AM+AGY +    E  VK++R +   G++PN  T SS +  C+  SA ++ G+
Sbjct: 159 EKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSA-LQLGR 217

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q H    K+ L +     ++L++MY K G +E   ++F +  +RD+V+WN+MI GYAQHG
Sbjct: 218 QVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHG 277

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             KKAL +F EM  + ++ D ITF+ V+ AC HAG  D G +YF  M  ++ +    +HY
Sbjct: 278 EGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHY 337

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQP 666
           +CMVDL  RAG L +A+D+I +MPF   A V+ T+L ACR              L++L P
Sbjct: 338 TCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAEFASQKLLNLDP 397

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
             +  YV L+N+YAAT  W   ARVRK M   KV K  GYSWIEVK+  + F +GD  HP
Sbjct: 398 ASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMAHQFRSGDKFHP 457

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           +   I+ KL+EL  ++K AGY PD  + L D+ +E KE +L  HSE+LAIA+GL+  P G
Sbjct: 458 ELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLAIAYGLIKLPPG 517

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            P+++ KNLRVCGDCH  IK IS++ERR+I+VRDT RFHHFK+G CSC DYW
Sbjct: 518 TPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCADYW 569



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 147/274 (53%), Gaps = 9/274 (3%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +++  Y+R +N+E  +  F+DM   +  SW ++++G+A+N+  D+  +LF  M  +    
Sbjct: 43  TMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTK---- 98

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           N  T++ ++    + G + +A+++     +           A+I+ Y+K   +  A  +F
Sbjct: 99  NVVTWNAMISGYVECGDLDSALKL----FEKAPFKSVVAWTAMITGYMKLGRIGLAERLF 154

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           + M +++ +TWN+M+AGY+ N    +  + F  M   G +   ST  S +  C+    L+
Sbjct: 155 EKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQ 214

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           L RQ+H  V K+ +  D    T L+  Y KCG +ED  K+F  +   +DVV+W AMISG+
Sbjct: 215 LGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPR-RDVVTWNAMISGY 273

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            Q+G    A+  F +M  +G++P+  T+  +L A
Sbjct: 274 AQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMA 307



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 24/337 (7%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS----- 83
           K+ Q LF + P+ + V YN +L  Y R+S  + A   F  +     P + + ++      
Sbjct: 24  KEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQ 83

Query: 84  ----------VLKTCGCL-FDHVFGRQVHCECVKSGFA-------RDVNVSTSLVDLYMR 125
                     ++ T   + ++ +    V C  + S          + V   T+++  YM+
Sbjct: 84  QMDKARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMK 143

Query: 126 TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
              +    R+F+ M E N+V+W ++++GY  N   +  ++LF  M   GI+PNS T S+ 
Sbjct: 144 LGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSA 203

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L   ++   +    QVH +V K+     T+   +LISMY K  ++ D   +F  +  RD 
Sbjct: 204 LLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDV 263

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA-RQLHS 304
           +TWN+M++GY  +    +A   F+ M   G +    TFV+V+  C       L  +  HS
Sbjct: 264 VTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHS 323

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
                G+    +  T ++    + GK+ +A  +   M
Sbjct: 324 MAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKM 360



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 10/148 (6%)

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L   +  +S L  M  K+G ++ A E+F +  + D VS+N+M+  Y ++ + ++A   F+
Sbjct: 3   LKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFE 62

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           +M  +D      ++  +IT       +D+ +  F IM  ++ +      ++ M+  Y   
Sbjct: 63  DMPIKDTP----SWNTMITGFAQNQQMDKARDLFLIMPTKNVVT-----WNAMISGYVEC 113

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAA 658
           G L+ A+ +  + PF  S   W  ++  
Sbjct: 114 GDLDSALKLFEKAPF-KSVVAWTAMITG 140


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/583 (38%), Positives = 337/583 (57%), Gaps = 25/583 (4%)

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G +    TF  +IK C+  +      ++H  V+K G      I   L+  Y KC K E +
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            ++F  M + K+ VSW+A+I   LQ+       + F QM  EG RP   +   IL A   
Sbjct: 65  RQVFDEMPD-KNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRP---SRGAILNAMAC 120

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           V   +    V+  +++   +   SV +A    + + G ++ A K+F+ I  KD+V W+  
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           +  Y +      A+ + +Q+  +G+ P+  T   VI AC+   A+ +     H       
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACST-LASFQLAHIVHGIITTGF 239

Query: 511 L-NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             N  L V +AL+ +Y K G++  A +VF   ++R++++W++MI GY  HG  ++AL +F
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M+   ++ D ITF+ +++AC+H+GLV EG + F+ M  +  + P  EHY+CMVD+  R
Sbjct: 300 DQMK-ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGR 358

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L++A D I RMP   +A VW  +L ACR              L  L PH++  YV+L
Sbjct: 359 AGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVIL 418

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
            N+Y  TG  +E   +R LM +R VKK AGYS IE+KNK Y+F+AGD SHPQ++ IYS+L
Sbjct: 419 YNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSEL 478

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
           E L  R++  GY PD ++VL D+D+E KE++L  HSE+LAI FGL+    G+ ++I KNL
Sbjct: 479 ERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNL 538

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           RVCGDCHT  K ISK+  R+IVVRD +RFHHFK G CSC DYW
Sbjct: 539 RVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 197/398 (49%), Gaps = 28/398 (7%)

Query: 71  RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE 130
           RLG+     T   ++K C CL    FG ++H + VK G+   V +S SL+ +Y + +  E
Sbjct: 3   RLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYE 62

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
             R+VFD+M + N VSW++++    ++        LF +M  EG +P+      +L  +A
Sbjct: 63  LSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMA 119

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
                  A  V+ +V++NG +   SV +A   M+ +   V  AR +FDG+  +D +TW +
Sbjct: 120 CVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWAT 179

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
            +  YV  ++ +EA      M L G      T + VI+ C+T    +LA  +H  ++  G
Sbjct: 180 TIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTG 238

Query: 311 IDFDH--NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN 368
             ++    + T L+  Y KCG +  A K+F  M+E +++++W+AMISG+  +G    A+N
Sbjct: 239 FFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQE-RNIITWSAMISGYGMHGWGREALN 297

Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE------KSFSVG------ 416
            F QM +  V+P+  T+  IL+A         H+ ++   +E      + F V       
Sbjct: 298 LFDQM-KASVKPDHITFVSILSACS-------HSGLVAEGWECFNSMARDFGVTPRPEHY 349

Query: 417 TALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAG 453
             +++   + G LDEA    E +  + +   W A+L  
Sbjct: 350 ACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGA 387



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 165/341 (48%), Gaps = 14/341 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGSTLSSVLKTCGC 90
           + +FD  P +N V ++ ++    +D   +E  +LF  +   G  P  G+ L+++     C
Sbjct: 65  RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM----AC 120

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +  H     V+   V++G   D +V ++   ++ R   VE  R++FD +   ++V+W + 
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM--VIKN 208
           +  Y +  M    L L  +M ++GI P++    T+LGV+     +A+    H +  +I  
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAI---TLLGVIRACSTLASFQLAHIVHGIITT 237

Query: 209 GG--EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           G     + +V  ALI +Y+K   +  AR VFDGM++R+ ITW++M++GY  +    EA  
Sbjct: 238 GFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALN 297

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAY 325
            F+ M  A  +    TFVS++  C+ +  +    +  + + ++ G+         ++   
Sbjct: 298 LFDQMK-ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDIL 356

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            + GK+++A      M    +   W A++     +  +DLA
Sbjct: 357 GRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLA 397



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 132/275 (48%), Gaps = 8/275 (2%)

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M R G++P+ FT+  I+ A   +  F+    +H  ++K  Y+    +  +L+  Y K   
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
            + + +VF+ + +K+ V+WSA++    Q    +    ++RQ+ SEG +P+     +++NA
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNA 117

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
             A   + E+    +   ++  L+    V SA   M+++ G +E A ++F     +DLV+
Sbjct: 118 -MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVT 176

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           W + I  Y +     +AL + K+M  Q +  D IT +GVI AC+             I+ 
Sbjct: 177 WATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIIT 236

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
                   +   + ++DLY + G L  A  + + M
Sbjct: 237 TGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGM 271


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/581 (38%), Positives = 344/581 (59%), Gaps = 38/581 (6%)

Query: 289 LCATTKELRLAR------QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           LC T   L  +R      QLH+ ++K G+     +   L+  YSK      + +IF    
Sbjct: 23  LCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHD-S 81

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI------ILTAQPAVS 396
             K   +W+++IS   QN    L++N+F  M R+GV P+   +        IL++ P   
Sbjct: 82  PHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAK 141

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
              +H   +KT Y     VG+++++ Y K G +  A  VF+ +  +++V+WS ++ GY Q
Sbjct: 142 --MLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQ 199

Query: 457 IGDTEGAVKIYRQL----TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           +G+ + +++++++      +EGV  N+FT SSV+  C   S  ++ G+  H  S K   +
Sbjct: 200 LGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLRVCGG-STLLQMGRLIHGLSFKTSFD 256

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           ++  V+S+L+++YSK G +E A +VF+    R+L  WN+M+   AQH HT K  E+F +M
Sbjct: 257 SSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKM 316

Query: 573 RR-QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           +    ++ + ITF+ V+ AC+HAGLV++G+ YF++M  ++ I P  +HYS MVDL  RAG
Sbjct: 317 KSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAG 375

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
            L  A+ +I  MP   + +VW  +L  CRL                L    S ++V+LSN
Sbjct: 376 KLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSN 435

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
            YAA G W+E A+ RK+M DR +KKE G SW+E  N+ ++F AGD SH +S +IY KL+E
Sbjct: 436 AYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDE 495

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           L   +  AGY  DTS+VL+++D E K   +  HSERLAIAFG +  P G P++++KNLRV
Sbjct: 496 LGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRV 555

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCHT IK ISK   R I+VRD NRFH F++G C+CGDYW
Sbjct: 556 CGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDYW 596



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 164/351 (46%), Gaps = 12/351 (3%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYSK         +F  SP ++   ++ ++  + ++ L   +LN F  + R G+P     
Sbjct: 64  FYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHI 123

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
             S  K+CG L      + +HC  +K+ +  D+ V +S++D+Y +  ++     VFD+M 
Sbjct: 124 FPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMP 183

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQV----EGIKPNSFTFSTVLGVLADEGIVA 196
             NVVSW+ L+ GY +   +D  L LF R  V    EG+  N FT S+VL V     ++ 
Sbjct: 184 YRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLRVCGGSTLLQ 241

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
               +H +  K   +    V ++LIS+Y K  +V +A  VF+ +  R+   WN+M+    
Sbjct: 242 MGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACA 301

Query: 257 TNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
            +    + FE F+ M  + G +    TF+ V+  C+    +   +     +   GI+   
Sbjct: 302 QHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGT 361

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
              + ++    + GK+ DA K+   M        W A+++G   +G   LA
Sbjct: 362 QHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLA 412



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 113/513 (22%), Positives = 211/513 (41%), Gaps = 69/513 (13%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H   +K G      +S  L++ Y +T+      ++F D    +  +W+S++S +A+
Sbjct: 39  GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N +    L  F  M  +G+ P+   F +          +  A  +H   +K    +   V
Sbjct: 99  NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFV 158

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            +++I MY K   +  A  VFD M  R+ ++W+ ++ GYV      E+   F    L   
Sbjct: 159 GSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRF-LVEE 217

Query: 277 E---LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           E   +   T  SV+++C  +  L++ R +H    K   D    + + L+  YSKCG +E+
Sbjct: 218 ENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEE 277

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQ 392
           A  +F  +  ++++  W AM+    Q+   D     F +M +  G++ N  T+  +L A 
Sbjct: 278 AYDVFEEV-TVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYAC 336

Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA----WS 448
                   HA                        G++++    FEL+ +  I      +S
Sbjct: 337 S-------HA------------------------GLVEKGKYYFELMKDYGIEPGTQHYS 365

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
            M+    + G    AVK+  ++  E   P E  + +++  C         G    A  + 
Sbjct: 366 TMVDLLGRAGKLNDAVKLIEEMPME---PTESVWGALLTGCRL------HGNTKLASYVA 416

Query: 509 AKLNNALCVSSALVTM----YSKKGNIESASEVFKRQRKRDL-----VSW-------NSM 552
            +++    VSS L  M    Y+  G  E A++  K  R R +     +SW       ++ 
Sbjct: 417 DRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTF 476

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFI 585
             G   H    K++E++ ++     E D   ++
Sbjct: 477 AAGDRSHA---KSVEIYDKLDELGEEMDKAGYV 506


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/584 (38%), Positives = 338/584 (57%), Gaps = 26/584 (4%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           ++ T+  +I  C     L  A ++H  +L NG D D  + T L+  YS  G ++ A K+F
Sbjct: 76  SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 135

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA---- 394
              R+ + +  W A+       G  +  +  + +M R GV  + FTY+ +L A  A    
Sbjct: 136 DKTRK-RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 395 ----VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
               +   ++HAH+ +  Y     + T L++ Y + G +D A+ VF  +  +++V+WSAM
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254

Query: 451 LAGYAQIGDTEGAVKIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +A YA+ G    A++ +R++  E     PN  T  SV+ AC A  AA+EQGK  H   ++
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC-ASLAALEQGKLIHGYILR 313

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L++ L V SALVTMY + G +E    VF R   RD+VSWNS+I  Y  HG+ KKA+++
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM         +TF+ V+ AC+H GLV+EG++ F+ M  +H I P +EHY+CMVDL  
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RA  L++A  ++  M       VW ++L +CR              L +L+P ++  YVL
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+++YA    W E  RV+KL+  R ++K  G  W+EV+ K YSF++ D  +P   QI++ 
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 553

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L +L+  +K+ GY P T  VL +++ E KE I+  HSE+LA+AFGL+ T  G P++I KN
Sbjct: 554 LVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKN 613

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR+C DCH   K ISK   ++I+VRD NRFH FK G+CSCGDYW
Sbjct: 614 LRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 192/405 (47%), Gaps = 22/405 (5%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P+  T+  ++        ++ A++VH  ++ NG +    +   LI MY     V  AR V
Sbjct: 75  PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA----T 292
           FD    R    WN++           E    +  M   G E  R T+  V+K C     T
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              L   +++H+ + + G      I T L+  Y++ G ++ AS +F  M  +++VVSW+A
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM-PVRNVVSWSA 253

Query: 353 MISGHLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
           MI+ + +NG    A+  F +M RE     PN  T   +L A  +++  +    +H +I++
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
              +    V +AL+  Y + G L+   +VF+ + ++D+V+W+++++ Y   G  + A++I
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSAL 521
           + ++ + G  P   TF SV+ AC+     VE+GK+          IK ++ +  C    +
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSH-EGLVEEGKRLFETMWRDHGIKPQIEHYAC----M 428

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKA 565
           V +  +   ++ A+++ +  R       W S++     HG+ + A
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 172/352 (48%), Gaps = 20/352 (5%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++K   +FD++ +R    +N L          +E L L+  + R+G+     T + VLK
Sbjct: 130 YARK---VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186

Query: 87  TC---GCLFDHVF-GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
            C    C  +H+  G+++H    + G++  V + T+LVD+Y R   V+    VF  M   
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR 246

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           NVVSW+++++ YA+N      L  F  M  + +   PNS T  +VL   A    +     
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  +++ G + +  V +AL++MY +   +   + VFD M DRD ++WNS+++ Y  +  
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             +A + F  M   GA  T  TFVSV+  C+    +   ++L   + +     DH I+  
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR-----DHGIKPQ 421

Query: 321 L-----MV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +     MV    +  ++++A+K+   MR       W +++     +G ++LA
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 180/388 (46%), Gaps = 21/388 (5%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           +VH   + +G  +D  ++T L+ +Y    +V+  R+VFD   +  +  W +L        
Sbjct: 98  RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIV---ATAVQVHTMVIKNGGEVVT 214
             + VL L+ +M   G++ + FT++ VL   +A E  V       ++H  + + G     
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            +   L+ MY +   V  A  VF GM  R+ ++W++M+A Y  N    EA  TF  M   
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277

Query: 275 GAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             + + +  T VSV++ CA+   L   + +H  +L+ G+D    + + L+  Y +CGK+E
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
              ++F  M + +DVVSW ++IS +  +G    A+  F +M   G  P   T+  +L A 
Sbjct: 338 VGQRVFDRMHD-RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396

Query: 392 ------QPAVSPFQV--HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK-VFELIDEK 442
                 +     F+     H IK   E        +++   +   LDEAAK V ++  E 
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHY----ACMVDLLGRANRLDEAAKMVQDMRTEP 452

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
               W ++L      G+ E A +  R+L
Sbjct: 453 GPKVWGSLLGSCRIHGNVELAERASRRL 480


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 251/742 (33%), Positives = 404/742 (54%), Gaps = 29/742 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKTCGC 90
           Q  F   P      ++  +   C+ +LH+EAL  F   ++    PL   T + ++  C  
Sbjct: 51  QLAFSPCPLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSS 110

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L     GR++H   +   +  D+ +   ++ +Y +  ++++ R +FD M   NVVSWTS+
Sbjct: 111 LRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSM 170

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN-- 208
           +SGY+R    D  + L+ +M   G  P+ FTF +++   +       A Q+H  V+K+  
Sbjct: 171 ISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEF 230

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +++    NALISMY K   + DA  VF  +  +D I+W SM+AG+      +EA   F
Sbjct: 231 GADLIAQ--NALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHF 288

Query: 269 NNMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
             M L+ +    + FV  S    C+   E    RQ+H   +K G+  D      L   Y+
Sbjct: 289 REM-LSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYA 347

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG +E A  +F  + E  D+V+W A+I+G         + +FF QM   G+ PN  T  
Sbjct: 348 KCGFLESARTVFYHI-EKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVL 406

Query: 387 IILTA--QPAV--SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L A  +P +     QVH++I+K  +     V  +LL+ Y K   L++A +VFE I  K
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466

Query: 443 -DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            DIV+W+ +L    Q       +++ + + +  +KP+  T ++V+ + +   A+ E G Q
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVS-SGQIASYEVGSQ 525

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H   +K+ LN  + VS+AL+ MY+K G++E A ++F      D++SW+S+I GYAQ G 
Sbjct: 526 IHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGC 585

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
            K+A E+F+ MR   ++ + ITF+G++TAC+H G+V+EG + +  M  ++ I PT EH S
Sbjct: 586 GKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCS 645

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPH 667
           CMVDL +RAG L+ A D I +MPF     VW+T+LAAC+              ++ + P 
Sbjct: 646 CMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPS 705

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           +SA  V+L N++A++GHW++ AR+R  M    V K  G SWIE+K+K + FLA D  HP+
Sbjct: 706 NSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPE 765

Query: 728 SNQIYSKLEELSTRLKDAGYKP 749
             +IY+ LEEL  ++ D G  P
Sbjct: 766 RGKIYTMLEELMLQILDDGCDP 787



 Score =  239 bits (609), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 273/570 (47%), Gaps = 12/570 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ +++FD  P +N V +  ++  Y R      A+ L++ + R G      T  S++K+C
Sbjct: 150 KEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSC 209

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L D    RQ+H   +KS F  D+    +L+ +Y + + + D   VF  +   +++SW 
Sbjct: 210 SGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWG 269

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           S+++G+++       L  F  M  + + +PN F F +     +         Q+H + IK
Sbjct: 270 SMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIK 329

Query: 208 NG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            G G  + + C +L  MY K   +  AR VF  +E  D + WN+++AG+ +     E+  
Sbjct: 330 FGLGSDLFAGC-SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSS 388

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M   G      T +S++  C+    L    Q+HS ++K G + D  +   L+  YS
Sbjct: 389 FFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYS 448

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC  + DA ++F  +    D+VSW  +++  LQ       +     M    ++P+  T +
Sbjct: 449 KCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLT 508

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L +   ++ +    Q+H  I+K+      SV  AL+N Y K G L+ A K+F+ I   
Sbjct: 509 NVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNP 568

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           DI++WS+++ GYAQ G  + A +++R +   GVKPNE TF  ++ AC+      E  K +
Sbjct: 569 DIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLY 628

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH 561
                  +++      S +V + ++ G ++ A +  K+     D+V W +++     HG+
Sbjct: 629 RTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGN 688

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITAC 591
               LEV K      L+ D      V+  C
Sbjct: 689 ----LEVGKRAAENVLKIDPSNSAAVVMLC 714


>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 765

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 234/670 (34%), Positives = 378/670 (56%), Gaps = 38/670 (5%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  ++K G      + + L+++Y K   +  A+ VFD M  R+++ W +++ GYV N +
Sbjct: 95  IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSM 154

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKL--CATTKELRLARQLHSQVLKNGIDFDHNIR 318
              A   F  M L  +E   S +   I L  C +   L+L  QLH+ ++K  +DFD +I 
Sbjct: 155 PKHAIHLFEEM-LLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIG 213

Query: 319 TGLMVAYSKCG-KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE- 376
             L   Y+KCG K+E     F  ++E KDV+SWTA IS   + G     V  F +M  + 
Sbjct: 214 NALCSLYTKCGGKLEVGLTAFRRIKE-KDVISWTAAISACGEKGEAMKGVRVFVEMLLDE 272

Query: 377 -GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
             V+PN +T +  L+    V       QVHA   K  YE +  V  +LL  Y+K G + E
Sbjct: 273 VQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVE 332

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEG-----------AVKIYRQLTSEGVKPNEF 480
           A ++F+ +++ ++V W+AM+AG+AQ+ +              A+ ++ +L   G+KP+ F
Sbjct: 333 AQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPF 392

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           TFSSV++ C+    A+EQG+Q HA +IK    + + V S+++ MY+K G+IE AS+VF  
Sbjct: 393 TFSSVLSVCSK-MMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLE 451

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              R ++ W +MI G+AQHG +K+AL +F++M+   +  + +TF+GV++AC  AG+V+E 
Sbjct: 452 MSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEA 511

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC- 659
             YF+IM  E+ I P M+HY C+VD+  R G +++A D+I +M + AS  +W  ++  C 
Sbjct: 512 FNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCL 571

Query: 660 -------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                        +L+SL+P D+  Y LL N Y + G + + +RV  +M + K+ +   +
Sbjct: 572 SQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDW 631

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SWI +K++ YSF   D +  +S+ I   LE+L  + K+ GY+        D + E   + 
Sbjct: 632 SWISIKDRVYSFQTNDKADIESS-IGKSLEDLHIKAKNLGYEMLEYVEKSDKEKEKTSSP 690

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
              HSE+LAI FGL   P  +P+++VKN  +C D H  +K IS L  R+I+V+D+ R H 
Sbjct: 691 TIYHSEKLAITFGLENLPNSSPVRVVKNTLMCRDSHNFVKYISTLTSREIIVKDSKRLHK 750

Query: 827 FKEGLCSCGD 836
           F  G CSCG+
Sbjct: 751 FVNGQCSCGN 760



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 261/534 (48%), Gaps = 28/534 (5%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +HC  VK+G   D  +S+ LV +Y +   +E  ++VFD MN  N V+WT+L+ GY +N M
Sbjct: 95  IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSM 154

Query: 160 NDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               + LF  M +     P+++T +  L        +    Q+H  +IK   +  TS+ N
Sbjct: 155 PKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGN 214

Query: 219 ALISMYLK-SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           AL S+Y K    +      F  ++++D I+W + ++        M+    F  M L   +
Sbjct: 215 ALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQ 274

Query: 278 LTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
           +  +  T  S +  C   K L L  Q+H+   K G + +  +R  L+  Y KCG + +A 
Sbjct: 275 VQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQ 334

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDL-----------AVNFFCQMTREGVRPNGFT 384
           ++F  M ++ ++V+W AMI+GH Q   +             A+N F ++ R G++P+ FT
Sbjct: 335 RLFKGMNDV-NLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFT 393

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           +S +L+    +       Q+HA  IKT +     VG++++N Y K G ++ A+KVF  + 
Sbjct: 394 FSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMS 453

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            + ++ W+ M+ G+AQ G ++ A+ ++  +   G++PN  TF  V++AC +     E   
Sbjct: 454 IRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFN 513

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQH 559
            F     + K+   +     LV M  + G ++ A ++ K+   K     W+++I G    
Sbjct: 514 YFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQ 573

Query: 560 GHTK---KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE 610
           G+ +    A E    ++ +D E    T+  ++ A   AG  D+  +  +IM  E
Sbjct: 574 GNLELGCDAAEKLLSLKPKDTE----TYKLLLNAYVSAGRYDDVSRVENIMREE 623



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 231/484 (47%), Gaps = 35/484 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSVLKTCG 89
           Q +FD   +RN V +  L+  Y ++S+ + A++LF  + +     P    TL+  L  C 
Sbjct: 128 QQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYP-SNYTLAIALNACT 186

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT-NNVEDGRRVFDDMNESNVVSWT 148
            L     G Q+H   +K     D ++  +L  LY +    +E G   F  + E +V+SWT
Sbjct: 187 SLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWT 246

Query: 149 SLLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           + +S         + + +F  M ++   ++PN +T ++ L    +   +   +QVH +  
Sbjct: 247 AAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCT 306

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV---------- 256
           K G E    V N+L+ +YLK   + +A+ +F GM D + +TWN+M+AG+           
Sbjct: 307 KLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNL 366

Query: 257 -TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
              +  +EA   F+ +  +G +    TF SV+ +C+    L    Q+H++ +K G   D 
Sbjct: 367 SAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDV 426

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
            + + ++  Y+KCG +E ASK+F  M  ++ ++ WT MI+G  Q+G    A+N F  M  
Sbjct: 427 VVGSSMINMYNKCGSIERASKVFLEM-SIRTMILWTTMITGFAQHGWSKQALNLFEDMKL 485

Query: 376 EGVRPNGFTYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
            G+RPN  T+  +L+A         A + F++     K        V   L++  V+ G 
Sbjct: 486 VGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYV--CLVDMLVRLGQ 543

Query: 429 LDEAAKVFELIDEKDIVA----WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           + EA   F+LI + D  A    WS ++ G    G+ E       +L S   K  E T+  
Sbjct: 544 VQEA---FDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTE-TYKL 599

Query: 485 VINA 488
           ++NA
Sbjct: 600 LLNA 603



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 205/412 (49%), Gaps = 23/412 (5%)

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           E F+    +  E+  S +  +++ C         + +H  ++K G   D  + + L+  Y
Sbjct: 59  EAFSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVY 118

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFT 384
           +KCG+ME A ++F  M   ++ V+WT ++ G++QN     A++ F +M       P+ +T
Sbjct: 119 AKCGRMECAQQVFDHMNR-RNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYT 177

Query: 385 YSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVFELI 439
            +I L A  ++       Q+HA+IIK + +   S+G AL + Y K  G L+     F  I
Sbjct: 178 LAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRI 237

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ--LTSEGVKPNEFTFSSVINACTAPSAAVE 497
            EKD+++W+A ++   + G+    V+++ +  L    V+PNE+T +S ++ C      +E
Sbjct: 238 KEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQC-CEVKCLE 296

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
            G Q HA   K    + L V ++L+ +Y K G I  A  +FK     +LV+WN+MI G+A
Sbjct: 297 LGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHA 356

Query: 558 QHGHTKK-----------ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           Q     K           AL +F ++ R  ++ D  TF  V++ C+    +++G+Q    
Sbjct: 357 QMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHAR 416

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            +    +   +   S M+++Y++ G +E+A  +   M    +  +W T++  
Sbjct: 417 TIKTGFLSDVVVG-SSMINMYNKCGSIERASKVFLEMSI-RTMILWTTMITG 466


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 256/712 (35%), Positives = 379/712 (53%), Gaps = 34/712 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR--VFDDMNES--NVVSWTSLLS 152
           G  +H   +KSG A    VS SL+  Y        G    VF D+     +V SW SLL+
Sbjct: 33  GDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLN 92

Query: 153 GYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK--- 207
             +R++     L  F  M    + + P   +F+ V    A     +     H    K   
Sbjct: 93  PLSRHQ-PLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPS 151

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           + G     V  AL++MY K   + DAR VFD M  R++++W +MV+GY T +   EAFE 
Sbjct: 152 SSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFEL 211

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRL--ARQLHSQVLKNGIDFDHNIRTGLMVAY 325
           F  M L    L ++ FV+   L A +  L L    QLH  VLK+G+    ++   L+  Y
Sbjct: 212 FRLM-LQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMY 270

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
           +K   M+ A  +F   +E ++ ++W+AMI+G+ QNG  D A   F QM   G  P  FT+
Sbjct: 271 AKAECMDAAMAVFGSSKE-RNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTF 329

Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELID 440
             IL A   +       Q H  ++K  +E+   V +AL++ Y K G   +A   F +L D
Sbjct: 330 VGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYD 389

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D+V W+AM+ G+ Q G+ E A+ +Y ++  EGV P+  T +SV+ AC A  AA+E GK
Sbjct: 390 VDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRAC-ACLAALEPGK 448

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q HA  +K        V +AL TMYSK GN+E +  VF+R   RD++SWNS+I G++QHG
Sbjct: 449 QLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHG 508

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             + AL++F+EM+ + +  D ITFI V+ AC+H GLVD G  YF  M  ++ + P ++HY
Sbjct: 509 RGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHY 568

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQP 666
           +C+VD+ SRAG L++A D I  +       +WR VL ACR              L+ L  
Sbjct: 569 ACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGT 628

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            DS+ Y+LLSN+YAA   W +  RVR LM  R V K+ G SW+E+ N+   F+ G+  HP
Sbjct: 629 EDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQQHP 688

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAF 778
           ++ +I  +L  L+  +KD GY+    ++  D  D  +E    Q  E ++ AF
Sbjct: 689 EAEKINVELIRLAKHMKDEGYRQTYKFLFDDELDALRERHEEQQLELISTAF 740



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 182/360 (50%), Gaps = 3/360 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +FD+ P RN V +  ++  Y      +EA  LF L ++   L       ++VL       
Sbjct: 180 VFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPL 239

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
             + G Q+H   +K G    V+V  SLV +Y +   ++    VF    E N ++W+++++
Sbjct: 240 GLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMIT 299

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GYA+N   D    +F +M   G  P  FTF  +L   +D G +    Q H +++K G E 
Sbjct: 300 GYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFER 359

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT-WNSMVAGYVTNELHMEAFETFNNM 271
              V +AL+ MY K     DA+  F  + D D +  W +M+ G+V N  H EA   ++ M
Sbjct: 360 QVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRM 419

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G   +  T  SV++ CA    L   +QLH+Q+LK G     ++ T L   YSKCG +
Sbjct: 420 DKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNL 479

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           ED+  +F  M + +D++SW ++ISG  Q+G    A++ F +M  EG+ P+  T+  +L A
Sbjct: 480 EDSMVVFRRMPD-RDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCA 538



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 133/260 (51%), Gaps = 1/260 (0%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++F  S +RN + ++ ++  Y ++     A  +FL +   G      T   +L     + 
Sbjct: 281 AVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMG 340

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSLL 151
             V G+Q H   VK GF R V V ++LVD+Y +     D +  F  + +  +VV WT+++
Sbjct: 341 ALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMI 400

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G+ +N  ++  L L+ RM  EG+ P+  T ++VL   A    +    Q+H  ++K G  
Sbjct: 401 TGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFG 460

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +  SV  AL +MY K   + D+  VF  M DRD I+WNS+++G+  +    +A + F  M
Sbjct: 461 LGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEM 520

Query: 272 GLAGAELTRSTFVSVIKLCA 291
            L G      TF++V+  C+
Sbjct: 521 KLEGIAPDHITFINVLCACS 540



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 89/154 (57%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +  ++  + ++  H+EAL L+  + + G+     T++SVL+ C CL     G+Q+H
Sbjct: 392 DVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLH 451

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMND 161
            + +K GF    +V T+L  +Y +  N+ED   VF  M + +++SW S++SG++++    
Sbjct: 452 AQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGR 511

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
             L+LF  M++EGI P+  TF  VL   +  G+V
Sbjct: 512 DALDLFEEMKLEGIAPDHITFINVLCACSHMGLV 545


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 260/750 (34%), Positives = 401/750 (53%), Gaps = 59/750 (7%)

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV---LADEGIVATAV 199
           + VS+ SL+S     +     L+    M  +  + +SFT  +VL     LAD+G      
Sbjct: 117 DAVSYNSLISALCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSHLADQGH-RLGR 174

Query: 200 QVHTMVIKNG----GEVVTSVCNALISMYLKSKMVRDARAVF--DGMEDRDSITWNSMVA 253
           + H   +K+G    G       NAL+SMY +  +V DA+ +F   G    D +TWN+M++
Sbjct: 175 EAHAFALKHGFLDKGRERFPF-NALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMIS 233

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
             V      EA +   +M   G      TF S +  C+  + L + R++H+ VLK+  D 
Sbjct: 234 LLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDD-DL 292

Query: 314 DHN--IRTGLMVAYSKCGKMEDASKIFSMMREM-KDVVSWTAMISGHLQNGAIDL-AVNF 369
             N  + + L+  Y+   ++  A ++F M+ E  + +  W AMI G+ Q+G +D  A+  
Sbjct: 293 AANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIEL 352

Query: 370 FCQMTRE-GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYV 424
           F +M  E G  P+  T + +L A      F     VH +++K +   +  V  AL++ Y 
Sbjct: 353 FSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYA 412

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR--QLTSEGVK------ 476
           + G +DEA  +F +ID +DIV+W+ ++ G    G    A ++ R  QL S          
Sbjct: 413 RLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLE 472

Query: 477 ------------PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
                       PN  T  +++  C A  AA  +GK+ H  +++  L + L V SALV M
Sbjct: 473 GDDTSVDGQRCMPNNITLMTLLPGC-AVLAAPARGKEIHGYAVRHALESDLAVGSALVDM 531

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM-RRQDLEFDGIT 583
           Y+K G +  A  VF R  +R++++WN +I  Y  HG   +AL +F  M    +   + +T
Sbjct: 532 YAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVT 591

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           FI  + AC+H+GLVD G + F  M  ++   PT   ++C+VD+  RAG L++A  II+ M
Sbjct: 592 FIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSM 651

Query: 644 -PFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQER 688
            P     + W T+L ACRL                L+P +++ YVLL N+Y+A G W+  
Sbjct: 652 APGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENS 711

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
             VR +M  R V KE G SWIE+    + F+AG+ +HP+S Q+++ ++ L  R++  GY 
Sbjct: 712 TEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYV 771

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
           PDTS VL D+D+  K A+L  HSE+LAIAFGL+  P GA +++ KNLRVC DCH   K I
Sbjct: 772 PDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFI 831

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           S++  R+IV+RD  RFHHF++G CSCGDYW
Sbjct: 832 SRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 209/466 (44%), Gaps = 52/466 (11%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +N ++    +    +EA+ +   +  LG+   G T +S L  C  L     GR+VH
Sbjct: 224 DLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVH 283

Query: 102 CECVK-SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE--SNVVSWTSLLSGYARN- 157
              +K    A +  V+++LVD+Y     V   RRVFD + E    +  W +++ GYA++ 
Sbjct: 284 AFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHG 343

Query: 158 KMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
            M++  +ELF RM+ E G  P+  T + VL   A   +      VH  V+K        V
Sbjct: 344 GMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFV 403

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            NAL+ MY +   + +A  +F  ++ RD ++WN+++ G +   L  EAF+    M L  +
Sbjct: 404 QNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSS 463

Query: 277 ELTRS--------------------TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
             +                      T ++++  CA        +++H   +++ ++ D  
Sbjct: 464 AASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLA 523

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           + + L+  Y+KCG +  A  +F  +   ++V++W  +I  +  +G  D A+  F +M   
Sbjct: 524 VGSALVDMYAKCGCLALARAVFDRLPR-RNVITWNVLIMAYGMHGLGDEALALFDRMVAN 582

Query: 377 G-VRPNGFTYSIILTA-------QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKK 426
           G   PN  T+   L A          +  FQ     +K +Y  E +  +   +++   + 
Sbjct: 583 GEATPNEVTFIAALAACSHSGLVDRGLELFQG----MKRDYGFEPTPYLHACVVDVLGRA 638

Query: 427 GILDEAAKVFELI--DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           G LDEA  +   +   E  + AWS ML          GA +++R +
Sbjct: 639 GRLDEAYGIISSMAPGEHQVSAWSTML----------GACRLHRNV 674


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/743 (33%), Positives = 409/743 (55%), Gaps = 34/743 (4%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVL 85
           Y++K   +F++ P+RN V ++ ++       +++E+L +FL   R          LSS +
Sbjct: 97  YARK---VFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153

Query: 86  KTCGCLFDHVFGR----QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           + C  L     GR    Q+    VKSGF RDV V T L+D Y++  N++  R VFD + E
Sbjct: 154 QACSGLDGR--GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            + V+WT+++SG  +   +   L+LF+++  + + P+ +  STVL   +    +    Q+
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  +++ G E+  S+ N LI  Y+K   V  A  +F+GM +++ I+W ++++GY  N LH
Sbjct: 272 HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALH 331

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            EA E F +M   G +       S++  CA+   L    Q+H+  +K  +  D  +   L
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSL 391

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA---IDLAVNFFCQMTREGV 378
           +  Y+KC  + DA K+F +     DVV + AMI G+ + G    +  A+N F  M    +
Sbjct: 392 IDMYAKCDCLTDARKVFDIF-AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           RP+  T+  +L A  +++      Q+H  + K         G+AL++ Y     L ++  
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VF+ +  KD+V W++M AGY Q  + E A+ ++ +L     +P+EFTF++++ A     A
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA-AGNLA 569

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           +V+ G++FH   +K  L     +++AL+ MY+K G+ E A + F     RD+V WNS+I 
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            YA HG  KKAL++ ++M  + +E + ITF+GV++AC+HAGLV++G + F++M+    I 
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIE 688

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------R 660
           P  EHY CMV L  RAG L KA ++I +MP   +A VWR++L+ C               
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
            I   P DS  + +LSN+YA+ G W E  +VR+ M    V KE G SWI +  + + FL+
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLS 808

Query: 721 GDISHPQSNQIYSKLEELSTRLK 743
            D SH ++NQIY  L++L  +++
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQIR 831



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 165/581 (28%), Positives = 300/581 (51%), Gaps = 38/581 (6%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           VH + +  G   D  +S  L++LY R   +   R+VF+ M E N+VSW++++S    + +
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 160 NDRVLELFHRM-QVEGIKPNSFTFSTVLGVLA--DEGIVATAVQVHTMVIKNGGEVVTSV 216
            +  L +F    +     PN +  S+ +   +  D        Q+ + ++K+G +    V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG-------YVTNELHMEAFETFN 269
              LI  YLK   +  AR VFD + ++ ++TW +M++G       YV+ +L  +  E  +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME--D 243

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           N+   G  L+     +V+  C+    L   +Q+H+ +L+ G++ D ++   L+ +Y KCG
Sbjct: 244 NVVPDGYILS-----TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           ++  A K+F+ M   K+++SWT ++SG+ QN     A+  F  M++ G++P+ +  S IL
Sbjct: 299 RVIAAHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
           T+  ++       QVHA+ IK N      V  +L++ Y K   L +A KVF++    D+V
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417

Query: 446 AWSAMLAGYAQIG---DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
            ++AM+ GY+++G   +   A+ I+R +    ++P+  TF S++ A +A   ++   KQ 
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA-SASLTSLGLSKQI 476

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
           H    K  LN  +   SAL+ +YS    ++ +  VF   + +DLV WNSM  GY Q    
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN 536

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEH 619
           ++AL +F E++      D  TF  ++TA  +   V  GQ++   ++    E + Y T   
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT--- 593

Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATV--WRTVLAA 658
            + ++D+Y++ G  E A    +    AAS  V  W +V+++
Sbjct: 594 -NALLDMYAKCGSPEDAHKAFDS---AASRDVVCWNSVISS 630



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 260/488 (53%), Gaps = 16/488 (3%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           F+ +L + A + ++     VH  +I  G E+ T + N LI++Y ++  +  AR VF+ M 
Sbjct: 47  FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV-SVIKLCATT--KELRL 298
           +R+ ++W++MV+    + ++ E+   F        +      + S I+ C+    +   +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
             QL S ++K+G D D  + T L+  Y K G ++ A  +F  + E K  V+WT MISG +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE-KSTVTWTTMISGCV 225

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSF 413
           + G   +++  F Q+  + V P+G+  S +L+A  ++ PF     Q+HAHI++   E   
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA-CSILPFLEGGKQIHAHILRYGLEMDA 284

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
           S+   L+++YVK G +  A K+F  +  K+I++W+ +L+GY Q    + A++++  ++  
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344

Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           G+KP+ +  SS++ +C A   A+  G Q HA +IKA L N   V+++L+ MY+K   +  
Sbjct: 345 GLKPDMYACSSILTSC-ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHG---HTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           A +VF      D+V +N+MI GY++ G      +AL +F++MR + +    +TF+ ++ A
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
                 +   +Q   +M  ++ +   +   S ++D+YS    L+ +  + + M       
Sbjct: 464 SASLTSLGLSKQIHGLMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK-VKDLV 521

Query: 651 VWRTVLAA 658
           +W ++ A 
Sbjct: 522 IWNSMFAG 529



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 197/383 (51%), Gaps = 20/383 (5%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           R  F  +++L A+   L     +H Q++  G++ D  +   L+  YS+ G M  A K+F 
Sbjct: 44  RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSP- 397
            M E +++VSW+ M+S    +G  + ++  F +  R     PN +  S  + A   +   
Sbjct: 104 KMPE-RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR 162

Query: 398 -----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                FQ+ + ++K+ +++   VGT L++ Y+K G +D A  VF+ + EK  V W+ M++
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G  ++G +  +++++ QL  + V P+ +  S+V++AC+     +E GKQ HA  ++  L 
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL-PFLEGGKQIHAHILRYGLE 281

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               + + L+  Y K G + +A ++F     ++++SW +++ GY Q+   K+A+E+F  M
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS----CMVDLYS 628
            +  L+ D      ++T+C     +  G Q     V+ + I   + + S     ++D+Y+
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQ-----VHAYTIKANLGNDSYVTNSLIDMYA 396

Query: 629 RAGMLEKAMDIINRMPFAASATV 651
           +   L  A  + +   FAA+  V
Sbjct: 397 KCDCLTDARKVFD--IFAAADVV 417



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 11/149 (7%)

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-- 574
           +S+ L+ +YS+ G +  A +VF++  +R+LVSW++M+     HG  +++L VF E  R  
Sbjct: 81  LSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTR 140

Query: 575 --QDLEFDGITFIGVITACTHAG--LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
                E+   +FI   +     G  +V + Q +      +  +Y      + ++D Y + 
Sbjct: 141 KDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG----TLLIDFYLKD 196

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G ++ A  + + +P  ++ T W T+++ C
Sbjct: 197 GNIDYARLVFDALPEKSTVT-WTTMISGC 224


>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
 gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/644 (36%), Positives = 364/644 (56%), Gaps = 31/644 (4%)

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            S+   +I+ Y +S  + DA  +FD M  RD ++WNSM++G V       A + F+ M  
Sbjct: 66  VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM-- 123

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              E +  ++ +++  C  + ++  A +L  Q+       D      ++  Y + GK++D
Sbjct: 124 --PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK----DTAAWNSMVHGYLQFGKVDD 177

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K+F  M   K+V+SWT MI G  QN     A++ F  M R  ++     ++ ++TA  
Sbjct: 178 ALKLFKQM-PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
               F    QVH  IIK  +     V  +L+  Y     + ++ KVF+    + +  W+A
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTA 296

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +L+GY+     E A+ I+  +    + PN+ TF+S +N+C+A    ++ GK+ H  ++K 
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL-GTLDWGKEMHGVAVKL 355

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L     V ++LV MYS  GN+  A  VF +  K+ +VSWNS+I G AQHG  K A  +F
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE-HHIYPTMEHYSCMVDLYS 628
            +M R + E D ITF G+++AC+H G +++G++ F  M +  +HI   ++HY+CMVD+  
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           R G L++A ++I RM    +  VW  +L+ACR+               +L    SA YVL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA+ G W   +++R  M    + K+ G SW+ ++ K + F +GD   P  ++IY K
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEK 593

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           LE L  +LK+ GY PD    L D++DE KE +L  HSERLAIAFGL+ T  G+ + ++KN
Sbjct: 594 LEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKN 653

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCHTVIKLIS +  R+IV+RD  RFHHFK G CSCGDYW
Sbjct: 654 LRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 225/479 (46%), Gaps = 48/479 (10%)

Query: 100 VHCECVKSGFARDVNVSTS--LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +H +C +S F+  V       L+  ++ +  +++ R VF+ +   +V  +T +++GY R+
Sbjct: 21  IHGKCYRS-FSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRS 79

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ----------VHTMVIK 207
                 L LF  M V  +     ++++++    + G + TAV+          V    + 
Sbjct: 80  NRLVDALNLFDEMPVRDV----VSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMV 135

Query: 208 NG----GEV-------------VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
           NG    G+V              T+  N+++  YL+   V DA  +F  M  ++ I+W +
Sbjct: 136 NGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTT 195

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           M+ G   NE   EA + F NM     + T   F  VI  CA      +  Q+H  ++K G
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG 255

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
             ++  +   L+  Y+ C ++ D+ K+F   +  + V  WTA++SG+  N   + A++ F
Sbjct: 256 FLYEEYVSASLITFYANCKRIGDSRKVFD-EKVHEQVAVWTALLSGYSLNKKHEDALSIF 314

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
             M R  + PN  T++  L +  A+       ++H   +K   E    VG +L+  Y   
Sbjct: 315 SGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDS 374

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G +++A  VF  I +K IV+W++++ G AQ G  + A  I+ Q+     +P+E TF+ ++
Sbjct: 375 GNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLL 434

Query: 487 NACTAPSAAVEQGKQFHACS-----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           +AC+      +  K F+  S     I  K+ +  C    +V +  + G ++ A E+ +R
Sbjct: 435 SACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC----MVDILGRCGKLKEAEELIER 489



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 244/548 (44%), Gaps = 72/548 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           + +F++ P  +   Y +++  Y R +   +ALNLF  +    +  + S +S  ++ CG  
Sbjct: 55  REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE-CGDM 113

Query: 90  ----CLFDHVFGRQVHC------ECVKSGFA------------RDVNVSTSLVDLYMRTN 127
                LFD +  R V         C +SG              +D     S+V  Y++  
Sbjct: 114 NTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFG 173

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
            V+D  ++F  M   NV+SWT+++ G  +N+ +   L+LF  M    IK  S  F+ V+ 
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
             A+       +QVH ++IK G      V  +LI+ Y   K + D+R VFD         
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           W ++++GY  N+ H +A   F+ M        +STF S +  C+    L   +++H   +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           K G++ D  +   L+V YS  G + DA  +F  + + K +VSW ++I G  Q+G    A 
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK-KSIVSWNSIIVGCAQHGRGKWAF 412

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
             F QM R    P+  T+                               T LL+A    G
Sbjct: 413 VIFGQMIRLNKEPDEITF-------------------------------TGLLSACSHCG 441

Query: 428 ILDEAAKVFELID------EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            L++  K+F  +       ++ I  ++ M+    + G  + A ++  ++    VKPNE  
Sbjct: 442 FLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMV 498

Query: 482 FSSVINACTAPSAAVEQGKQFHAC--SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           + ++++AC   S  V++G++  A   ++ +K + A  +   L  +Y+  G   + S++  
Sbjct: 499 WLALLSACRMHS-DVDRGEKAAAAIFNLDSKSSAAYVL---LSNIYASAGRWSNVSKLRV 554

Query: 540 RQRKRDLV 547
           + +K  ++
Sbjct: 555 KMKKNGIM 562



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 46/250 (18%)

Query: 402 AHIIKTNYEKSFSVGTALLNA------YVKKGILDEAAKVF------------------- 436
           +H+I     +SFSV     N       ++    +DEA +VF                   
Sbjct: 18  SHVIHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYT 77

Query: 437 ---------ELIDE---KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
                     L DE   +D+V+W++M++G  + GD   AVK++ ++    V     ++++
Sbjct: 78  RSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTA 133

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++N C       +  + F+   +K          +++V  Y + G ++ A ++FK+   +
Sbjct: 134 MVNGCFRSGKVDQAERLFYQMPVKDT-----AAWNSMVHGYLQFGKVDDALKLFKQMPGK 188

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           +++SW +MICG  Q+  + +AL++FK M R  ++     F  VITAC +A     G Q  
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVH 248

Query: 605 DIMVNEHHIY 614
            +++    +Y
Sbjct: 249 GLIIKLGFLY 258



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 49/196 (25%)

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK------------ 543
           V  GK + + S+  +  N       L+  +     I+ A EVF +               
Sbjct: 20  VIHGKCYRSFSVTVEFQN----REVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITG 75

Query: 544 -------------------RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
                              RD+VSWNSMI G  + G    A+++F EM  + +    +++
Sbjct: 76  YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSW 131

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME--HYSCMVDLYSRAGMLEKAMDIINR 642
             ++  C  +G VD+ ++ F  M       P  +   ++ MV  Y + G ++ A+ +  +
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQM-------PVKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184

Query: 643 MPFAASATVWRTVLAA 658
           MP   +   W T++  
Sbjct: 185 MP-GKNVISWTTMICG 199


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/656 (33%), Positives = 370/656 (56%), Gaps = 51/656 (7%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A ++F+ +++ + + WN+M  G+  N   + A + +  M   G      +F  ++K CA 
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS------------- 339
           +K L   +Q+H  VLK G D D  + T L+  Y++ G++EDA K+F              
Sbjct: 78  SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137

Query: 340 ---------------MMREM--KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
                          +  E+  KDVVSW AMISG+++      A+  +  M +  V+P+ 
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197

Query: 383 FTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
            T   +++A           Q+H+ I    +  +  +   L++ Y K G ++ A  +F+ 
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
           + +KD+++W+ ++ G+  +   + A+ +++++   G  PN+ T  SV+ AC A   A++ 
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC-AHLGAIDI 316

Query: 499 GKQFHACSIK--AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
           G+  H    K    + NA  + ++L+ MY+K G+IE+A +VF     R L SWN+MI G+
Sbjct: 317 GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 376

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A HG    A ++F +MR+  ++ D ITF+G+++AC+H+G++D G+  F  M  ++ I P 
Sbjct: 377 AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPK 436

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LI 662
           +EHY CM+DL    G+ ++A ++I  MP      +W ++L AC+              LI
Sbjct: 437 LEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLI 496

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            ++P +   YVLLSN+YA  G W + A++R L+ND+ +KK  G S IE+ +  + F+ GD
Sbjct: 497 KIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGD 556

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
             HP++ +IY  LEE+   +++ G+ PDTS VLQ++++E KE  L  HSE+LAIAFGL++
Sbjct: 557 KFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLIS 616

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           T  G  L IVKNLRVC +CH   KLISK+ +R+I+ RD  R H  K+G+ SC DYW
Sbjct: 617 TKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 214/459 (46%), Gaps = 42/459 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + N + +N +   +  +S    AL L++ +  LGL     +   +LK+C    
Sbjct: 20  SIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSK 79

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
             + G+Q+H   +K G+  D+ V+TSL+ +Y +   +ED  +VFD  +  +VVS+T+L++
Sbjct: 80  ALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALIT 139

Query: 153 GYA-RNKMND------------------------------RVLELFHRMQVEGIKPNSFT 181
           GYA R  +N+                                LEL+  M    +KP+  T
Sbjct: 140 GYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDEST 199

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
             TV+   A  G +    Q+H+ +  +G      + N LI +Y K   V  A  +F G+ 
Sbjct: 200 MVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLA 259

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            +D I+WN+++ G+    L+ EA   F  M  +G      T +SV+  CA    + + R 
Sbjct: 260 KKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRW 319

Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           +H  + K   G+    ++ T L+  Y+KCG +E A ++F  M   + + SW AMI G   
Sbjct: 320 IHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLT-RSLSSWNAMIFGFAM 378

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL 419
           +G  + A + F +M + G+ P+  T+  +L+A        +  HI ++   + + +   L
Sbjct: 379 HGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRS-MSQDYKITPKL 437

Query: 420 ------LNAYVKKGILDEAAKVFELID-EKDIVAWSAML 451
                 ++     G+  EA ++   +  E D V W ++L
Sbjct: 438 EHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 476



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 177/424 (41%), Gaps = 41/424 (9%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y    + LFD    ++ V +N ++  Y      +EAL L+  + +  +    ST+ +V+ 
Sbjct: 146 YINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVS 205

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C        GRQ+H      GF  ++ +   L+DLY +   VE    +F  + + +V+S
Sbjct: 206 ACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVIS 265

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W +L+ G+    +    L LF  M   G  PN  T  +VL   A  G +     +H  + 
Sbjct: 266 WNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIN 325

Query: 207 K--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           K   G    +S+  +LI MY K   +  A+ VFD M  R   +WN+M+ G+  +     A
Sbjct: 326 KRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAA 385

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH---SQVLKNGIDFDHNIRTGL 321
           F+ F+ M   G +    TFV ++  C+ +  L L R +    SQ  K     +H    G 
Sbjct: 386 FDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEH---YGC 442

Query: 322 MV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           M+     CG  ++A ++   M    D V W +++     +  ++L  ++   + +  + P
Sbjct: 443 MIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIK--IEP 500

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
                 ++L+                              N Y   G  D+ AK+  L++
Sbjct: 501 ENPGSYVLLS------------------------------NIYATAGRWDQVAKIRTLLN 530

Query: 441 EKDI 444
           +K I
Sbjct: 531 DKGI 534



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 133/261 (50%), Gaps = 34/261 (13%)

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           L  A  +FE I E +++ W+ M  G+A   D+  A+K+Y  + S G+ PN ++F  ++ +
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C A S A+ +G+Q H   +K   +  + V+++L++MY++ G +E A +VF R   R +VS
Sbjct: 75  C-AKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133

Query: 549 WNSMICGYAQHGHT-------------------------------KKALEVFKEMRRQDL 577
           + ++I GYA  G+                                K+ALE++K+M + ++
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D  T + V++AC  +G ++ G+Q     + +H     ++  + ++DLYS+ G +E A 
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHS-WIEDHGFGSNIKIVNVLIDLYSKCGEVETAC 252

Query: 638 DIINRMPFAASATVWRTVLAA 658
            +   +        W T++  
Sbjct: 253 GLFQGLA-KKDVISWNTLIGG 272


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/548 (39%), Positives = 341/548 (62%), Gaps = 22/548 (4%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIFSMM 341
           +  ++K C    ++   R +H+ ++ +    +H +   ++V  Y+KCG ++DA ++F  M
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSP- 397
              KD+V+WTA+I+G  QN     A+  F QM R G++PN FT S +L A   +  + P 
Sbjct: 150 -PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPG 208

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
            Q+HA  +K  Y+ S  VG+AL++ Y + G +D A   F+ +  K  V+W+A+++G+A+ 
Sbjct: 209 TQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARK 268

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G+ E A+ +  ++  +  +P  FT+SSV +AC A   A+EQGK  HA  IK+ L     +
Sbjct: 269 GEGEHALHLLWKMQRKNFQPTHFTYSSVFSAC-ASIGALEQGKWVHAHMIKSGLKLIAFI 327

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            + L+ MY+K G+I+ A  VF R  K D+VSWN+M+ G AQHG  K+ L+ F++M R  +
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGI 387

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           E + I+F+ V+TAC+H+GL+DEG  YF++M  ++ + P + HY   VDL  R G+L++A 
Sbjct: 388 EPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAE 446

Query: 638 DIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATG 683
             I  MP   +A VW  +L ACR+                L PHDS   +LLSN+YA+ G
Sbjct: 447 RFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAG 506

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W++ A+VRK+M +  VKK+   SW+E++N  + F+A D +HPQ  +I  K EE+S ++K
Sbjct: 507 RWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIK 566

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
           + GY PDTS+VL  +D + +E  L  HSE+LA+AF L+ TP G+P++I KN+RVCGDCH 
Sbjct: 567 EIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHA 626

Query: 804 VIKLISKL 811
            IK +SK+
Sbjct: 627 AIKFVSKI 634



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 196/413 (47%), Gaps = 40/413 (9%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           S +LK C  L     GR VH   V S F  + + +   +V++Y +   ++D RR+FD+M 
Sbjct: 91  SKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP 150

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             ++V+WT+L++G+++N      L LF +M   G++PN FT S++L     E  +    Q
Sbjct: 151 TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQ 210

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H   +K G +    V +AL+ MY +   +  A+  FDGM  +  ++WN++++G+     
Sbjct: 211 LHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGE 270

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
              A      M     + T  T+ SV   CA+   L   + +H+ ++K+G+     I   
Sbjct: 271 GEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNT 330

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y+K G ++DA ++F  + +  DVVSW  M++G  Q+G     ++ F QM R G+ P
Sbjct: 331 LLDMYAKAGSIDDAKRVFDRLVK-PDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           N  ++  +LT                               A    G+LDE    FEL+ 
Sbjct: 390 NEISFLCVLT-------------------------------ACSHSGLLDEGLYYFELMK 418

Query: 441 ----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
               E D+  +   +    ++G  + A +  R++    ++P    + +++ AC
Sbjct: 419 KYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP---IEPTAAVWGALLGAC 468



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 191/417 (45%), Gaps = 44/417 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P ++ V +  L+  + +++  ++AL LF  + RLGL     TLSS+LK  G    
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H  C+K G+   V V ++LVD+Y R  +++  +  FD M   + VSW +L+SG
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +AR    +  L L  +MQ +  +P  FT+S+V    A  G +     VH  +IK+G +++
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLI 324

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             + N L+ MY K+  + DA+ VFD +   D ++WN+M+ G   + L  E  + F  M  
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G E    +F+ V+  C+           HS +L  G+ +                    
Sbjct: 385 IGIEPNEISFLCVLTACS-----------HSGLLDEGLYY-------------------- 413

Query: 334 ASKIFSMMREMK---DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
               F +M++ K   DV  +   +    + G +D A  F  +M    + P    +  +L 
Sbjct: 414 ----FELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMP---IEPTAAVWGALLG 466

Query: 391 AQPAVSPFQVHAHIIKTNYE-KSFSVGTALL--NAYVKKGILDEAAKVFELIDEKDI 444
           A       ++  +  +  +E      G  +L  N Y   G   + AKV +++ E  +
Sbjct: 467 ACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGV 523



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 86/164 (52%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q  FD  P ++ V +N L+  + R    + AL+L   ++R        T SSV   C  +
Sbjct: 244 QLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASI 303

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ VH   +KSG      +  +L+D+Y +  +++D +RVFD + + +VVSW ++L
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           +G A++ +    L+ F +M   GI+PN  +F  VL   +  G++
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLL 407


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 247/702 (35%), Positives = 381/702 (54%), Gaps = 34/702 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLY--MRTNNVEDGRRVFDDMNES--NVVSWTSLLS 152
           G  +H   +KSG A    V+ SL++ Y  +    +     VFDD+  +  +V SW SLL+
Sbjct: 31  GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLN 90

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
             + ++  D +      +    + P+  +F+      A           H +  K    V
Sbjct: 91  PLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAV 150

Query: 213 V-TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               VC +L++MY K  +V DAR VFDGM  R+S +W++MVAGY   +   EAF+ F  M
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 210

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRL--ARQLHSQVLKNGI-DFDHNIRTGLMVAYSKC 328
            L      +S FV+   L A +  L L    Q+H  ++K+G+ DF  ++   L+  Y+K 
Sbjct: 211 -LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFV-SVENSLVTMYAKA 268

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G M  A  +F   RE ++ ++W+AMI+G+ QNG  D AV+ F QM   G  P  FT+  +
Sbjct: 269 GCMGAAFHVFESSRE-RNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGV 327

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L A   +       Q H  ++K  +E    V +AL++ Y K G + +A + F+ + E DI
Sbjct: 328 LNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDI 387

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V W+AM++G+ Q G+ E A+ +Y ++  EG+ P++ T +S + AC A  AA+E GKQ H 
Sbjct: 388 VLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRAC-AGIAALEPGKQLHT 446

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
             +K  L     V SAL TMYSK GN+E    VF+R   RD+++WNS+I G++Q+G    
Sbjct: 447 QIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNG 506

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           AL++F+EM+ +    D ITFI ++ AC+H GLVD G +YF +M  ++ + P ++HY+CMV
Sbjct: 507 ALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMV 566

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSA 670
           D+ SRAGML++A D I  +       +WR VL AC              RL+ L   DS+
Sbjct: 567 DILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSS 626

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            Y+LLSN+YA+   W +  RVR LM  R V K+ G SW+E+ ++ + F+ G+  HP++  
Sbjct: 627 AYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAEN 686

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSE 772
           I ++L  L+  +KD GY   +        DE    +   H E
Sbjct: 687 INAQLRRLAKHMKDEGYHSSSKLSF----DEELGPLAESHEE 724



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 189/363 (52%), Gaps = 10/363 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS-----SVLKTC 88
           +FD  PQRN   ++ ++  Y  +   +EA +LF    RL L    S  S     +VL   
Sbjct: 175 VFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLF----RLMLEECPSEKSEFVATAVLSAV 230

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
                 + G Q+H   VK G    V+V  SLV +Y +   +     VF+   E N ++W+
Sbjct: 231 SVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWS 290

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++GYA+N   D  + +F +M   G  P  FTF  VL   +D G +A   Q H +++K 
Sbjct: 291 AMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKL 350

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G EV   V +AL+ MY K   + DA+  FD + + D + W +MV+G+V N  H EA   +
Sbjct: 351 GFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLY 410

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M   G   ++ST  S ++ CA    L   +QLH+Q++K G+     + + L   YSKC
Sbjct: 411 ARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKC 470

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +ED   +F  + + +DV++W ++ISG  QNG  + A++ F +M  EG  P+  T+  I
Sbjct: 471 GNLEDGMSVFRRIPD-RDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINI 529

Query: 389 LTA 391
           L A
Sbjct: 530 LCA 532



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 132/258 (51%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+ S +RN + ++ ++  Y ++     A+++F  +   G      T   VL     L  
Sbjct: 277 VFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 336

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+Q H   VK GF   + V ++LVD+Y +   + D +  FD + E ++V WT+++SG
Sbjct: 337 LAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSG 396

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +N  ++  L L+ RM  EGI P+  T ++ L   A    +    Q+HT ++K G  + 
Sbjct: 397 HVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLG 456

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +AL +MY K   + D  +VF  + DRD I WNS+++G+  N     A + F  M +
Sbjct: 457 APVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKM 516

Query: 274 AGAELTRSTFVSVIKLCA 291
            G      TF++++  C+
Sbjct: 517 EGTIPDNITFINILCACS 534



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 99/176 (56%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD+  + + V +  ++  + ++  H+EAL L+  + + G+    ST++S L+ C  +   
Sbjct: 379 FDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL 438

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+Q+H + VK G      V ++L  +Y +  N+EDG  VF  + + +V++W S++SG+
Sbjct: 439 EPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGF 498

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++N   +  L+LF  M++EG  P++ TF  +L   +  G+V    +  +++ K+ G
Sbjct: 499 SQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYG 554


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/563 (39%), Positives = 343/563 (60%), Gaps = 25/563 (4%)

Query: 300 RQLHSQVLKNGIDF-DHNIRTGL---MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           RQ+H+  ++NG+   D  +   L   +V+      M  A K+FS + +  +V  W  +I 
Sbjct: 34  RQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 356 GHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYE 410
           G+ + G    AV+ + +M   G V P+  TY  +L A   ++  +    +H+ +I++ + 
Sbjct: 94  GYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFG 153

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
               V  +LL+ Y   G +  A KVF+ + EKD+VAW++++ G+A+ G  E A+ +Y ++
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
             +G+KP+ FT  S+++AC A   A+  GK+FH   IK  L   L  S+ L+ +Y++ G 
Sbjct: 214 DLKGIKPDGFTIVSLLSAC-AKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGR 272

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR-RQDLEFDGITFIGVIT 589
           +E A  +F     ++ VSW S+I G A +G  K+A+E+FK M  ++ L    ITF+G++ 
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILY 332

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC+H G+V EG +YF  M  E+ I P +EH+ CMVDL +RAG ++KA + I +MP   + 
Sbjct: 333 ACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNV 392

Query: 650 TVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
            +WRT+L AC              +++ L+P+ S  YVLLSNMYA+   W +  ++RK M
Sbjct: 393 VIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
               V+K  G+S +EV N+ + FL GD SHPQ++ IY+KL+E++ RL+  GY P  S V 
Sbjct: 453 LRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQISNVY 512

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
            D+++E KE  L  HSE++AIAF L++TP   P+++VKNL+VC DCH  IKL+SK+  R+
Sbjct: 513 VDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKVYNRE 572

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           IVVRD +RFHHFK G CSC DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 175/377 (46%), Gaps = 42/377 (11%)

Query: 7   LKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF 66
           L SL +P    PP S     +SK ++ +       N   +N L+  Y        A++L+
Sbjct: 60  LVSLPSP----PPMSYAHKVFSKIEKPI-------NVFIWNTLIRGYAEIGNSVSAVSLY 108

Query: 67  LGIRRLGLPLFGS-TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR 125
             +R  G     + T   +LK  G + D   G  +H   ++SGF   + V  SL+ LY  
Sbjct: 109 REMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN 168

Query: 126 TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
             +V    +VFD M E ++V+W S+++G+A N   +  L L+  M ++GIKP+ FT  ++
Sbjct: 169 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSL 228

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L   A  G +    + H  +IK G        N L+ +Y +   V +A+ +FD M D++S
Sbjct: 229 LSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           ++W S++ G   N L  EA E F NM    GL   E+   TFV ++  C+          
Sbjct: 289 VSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEI---TFVGILYACS---------- 335

Query: 302 LHSQVLKNGIDF------DHNIRT-----GLMV-AYSKCGKMEDASKIFSMMREMKDVVS 349
            H  ++K G ++      ++ I       G MV   ++ G+++ A +    M    +VV 
Sbjct: 336 -HCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVI 394

Query: 350 WTAMISGHLQNGAIDLA 366
           W  ++     +G  DLA
Sbjct: 395 WRTLLGACTVHGDSDLA 411



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 189/401 (47%), Gaps = 39/401 (9%)

Query: 98  RQVHCECVKSGFA-RDVNVSTSLVDLYMRT----NNVEDGRRVFDDMNES-NVVSWTSLL 151
           RQ+H   +++G +  D  +   L+  Y+ +      +    +VF  + +  NV  W +L+
Sbjct: 34  RQIHAFSIRNGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92

Query: 152 SGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            GYA    +   + L+  M+  G ++P++ T+  +L  +     V     +H++VI++G 
Sbjct: 93  RGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGF 152

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
             +  V N+L+ +Y     V  A  VFD M ++D + WNS++ G+  N    EA   +  
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M L G +    T VS++  CA    L L ++ H  ++K G+  + +    L+  Y++CG+
Sbjct: 213 MDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGR 272

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIIL 389
           +E+A  +F  M + K+ VSWT++I G   NG    A+  F  M ++EG+ P   T+  IL
Sbjct: 273 VEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGIL 331

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            A         H  ++K  +E            Y ++  + E  K+     E  I  +  
Sbjct: 332 YACS-------HCGMVKEGFE------------YFRR--MSEEYKI-----EPRIEHFGC 365

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           M+   A+ G  +   K Y  +    ++PN   + +++ ACT
Sbjct: 366 MVDLLARAGQVK---KAYEYILKMPMQPNVVIWRTLLGACT 403


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/609 (36%), Positives = 346/609 (56%), Gaps = 60/609 (9%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
           + ++I  C   ++L L +++H+    +       I   L+  Y+KCG + DA  +F  + 
Sbjct: 66  YSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIP 125

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAV 395
           + KD+ SW  MISG+   G I+ A   F +M       + F+++ +++          A+
Sbjct: 126 Q-KDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWYMEAL 180

Query: 396 SPF---------------------------------QVHAHIIKTNYEKSFSVGTALLNA 422
             F                                 ++H ++I++  E    V TALL+ 
Sbjct: 181 DLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDL 240

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G L+EA  +F+ + +KDIV+W+ M+    + G  +    ++R L   GV+PNE+TF
Sbjct: 241 YGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTF 300

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
           + V+NAC A  AA + GK+ H    +   +     +SALV +YSK GN E+A  VF +  
Sbjct: 301 AGVLNAC-ADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP 359

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           + DLVSW S+I GYAQ+G    AL+ F+ + R   + D ITF+GV++ACTHAGLVD G +
Sbjct: 360 RPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLE 419

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-- 660
           YF  +  +H +  T +HY+C++DL +R+G  ++A +II+ MP      +W ++L  CR  
Sbjct: 420 YFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIH 479

Query: 661 ------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                       L  L+P + A Y+ LSN+YA  G W E  +VR  M++R + K+ G SW
Sbjct: 480 GNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSW 539

Query: 709 IEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILS 768
           IE+K + + FL GD SHP+ + I+  L ELS ++K+ GY  DT++VL D+++E KE  + 
Sbjct: 540 IEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIF 599

Query: 769 QHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            HSE+LA+AFG+++T  G P+++ KNLR C DCH  +K ISK+ +R I+VRD+NRFH F 
Sbjct: 600 YHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFV 659

Query: 829 EGLCSCGDY 837
           +G CSC DY
Sbjct: 660 DGSCSCKDY 668



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 220/479 (45%), Gaps = 46/479 (9%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           KD +L   S  R F E   L   +C+ +  +EA++    I +    L+ + +++ L+   
Sbjct: 22  KDTTLSHHSEHRRFEEIIEL---FCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRK 78

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
                  G++VH     S F   + +S  L+ +Y +  ++ D + +FD++ + ++ SW +
Sbjct: 79  L----ELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNT 134

Query: 150 LLSGYAR-----------NKMNDR--------------------VLELFHRMQV-EGIKP 177
           ++SGYA            ++M  R                     L+LF  MQ  E    
Sbjct: 135 MISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNC 194

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           N FT S+ L   A    +    ++H  +I++G E+   V  AL+ +Y K   + +AR +F
Sbjct: 195 NMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIF 254

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           D M D+D ++W +M+     +    E F  F ++  +G      TF  V+  CA     +
Sbjct: 255 DQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQ 314

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           + +++H  + + G D      + L+  YSKCG  E A ++F+ M    D+VSWT++I G+
Sbjct: 315 MGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPR-PDLVSWTSLIVGY 373

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT 417
            QNG  D+A+ FF  + R G +P+  T+  +L+A        +      +  EK   V T
Sbjct: 374 AQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHT 433

Query: 418 A-----LLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           A     +++   + G   EA  + + +  K D   W+++L G    G+ E A +  + L
Sbjct: 434 ADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKAL 492



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 6/342 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR---LGLPLFGSTLSSVL 85
           ++ + LFD  P R+   +N ++  Y     + EAL+LF  ++        +F  TLSS L
Sbjct: 146 EQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMF--TLSSAL 203

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
                +     G+++H   ++SG   D  V T+L+DLY +  ++ + R +FD M + ++V
Sbjct: 204 AAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIV 263

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SWT+++     +        LF  +   G++PN +TF+ VL   AD        +VH  +
Sbjct: 264 SWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYM 323

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
            + G +  +   +AL+ +Y K      AR VF+ M   D ++W S++ GY  N     A 
Sbjct: 324 TRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMAL 383

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVA 324
           + F ++  +G +    TFV V+  C     + +  +  HS   K+G+    +    ++  
Sbjct: 384 QFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDL 443

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            ++ G+ ++A  I   M    D   W +++ G   +G I+LA
Sbjct: 444 LARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELA 485



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 53/339 (15%)

Query: 354 ISGHLQNGAIDLAVNFFCQMTR--EGV-------RPNGFTYSIILTAQPAVSPFQ----V 400
           +S H ++   +  +  FCQ  R  E V       +P+   YS ++ A       +    V
Sbjct: 26  LSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRV 85

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
           HAH   +N+     +   L++ Y K G L +A  +F+ I +KD+ +W+ M++GYA +G  
Sbjct: 86  HAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRI 145

Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE----------------------- 497
           E A K++ ++       + F++++VI+   +    +E                       
Sbjct: 146 EQARKLFDEMPHR----DNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSS 201

Query: 498 ------------QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
                       +GK+ H   I++ L     V +AL+ +Y K G++  A  +F +   +D
Sbjct: 202 ALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKD 261

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           +VSW +MI    + G  K+   +F+++    +  +  TF GV+ AC        G++   
Sbjct: 262 IVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHG 321

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
            M    +  P     S +V +YS+ G  E A  + N+MP
Sbjct: 322 YMTRVGYD-PFSFAASALVHVYSKCGNTETARRVFNQMP 359


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/638 (34%), Positives = 372/638 (58%), Gaps = 33/638 (5%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           ++S+Y +S  + +A+ VFD M      +W ++++ +  +  H EA   F+ M     E  
Sbjct: 29  MLSIYARSGDLSNAKGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTM----QERD 84

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
              +  ++ + AT   +  A+    Q+ +     D    T ++ A ++ G+ME+A + F 
Sbjct: 85  LIAWTIMLTVLATFSNIEDAKYHFDQMPER----DLVAWTAMLAANAERGQMENARETFD 140

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
            M E +++ SWT+++S + ++G +  A   F  M       N   ++ +LT         
Sbjct: 141 QMPE-RNLFSWTSLLSAYGRSGDVKAAGRVFDSMPEW----NLVAWTAMLTGYSLSGDVV 195

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
                  +  E+     TA+L+AY   G L    ++F+ + E+D+++W+ M+A   +   
Sbjct: 196 RAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDL 255

Query: 460 TEGAVKIYRQLT-----SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
            E + +++ ++      S+G+ PN  TF ++++AC+   A  E G++ HA   +   +  
Sbjct: 256 LEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAE-GRKIHAAVAERGFDTD 314

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L VS+ALV  Y + G +  A  VF   R+RD++SW+SMI  +AQ G   +A+E++  M  
Sbjct: 315 LVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLS 374

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           +    D I FI V+ AC+++G+V+    +F  +V +  + PT+EHY+CMVD+  RAG L 
Sbjct: 375 EGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLR 434

Query: 635 KAMDIINRMPFAASATVWRTVLAACRLIS--------------LQPHDSAIYVLLSNMYA 680
            A D++  MPF     ++ T+L+AC+L +              L P +S+ Y+ L+N+Y+
Sbjct: 435 DAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYS 494

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
           A    ++ AR+RKLM +R +KK+ G SWIEV ++ + F+AGD  HPQ ++IY++++ L  
Sbjct: 495 AAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGR 554

Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
           ++K+AGY  DT  VLQD++++ KE +L  HSE+LAIAFGL++TP GAPL+IVKNLRVC D
Sbjct: 555 QMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSD 614

Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CH   K+ISK+  R+I+VRDTNRFHHF+ G+CSC DYW
Sbjct: 615 CHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 216/493 (43%), Gaps = 32/493 (6%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR P+ +   +  LL  +     H+EA  LF  ++   L +  + + +VL T    
Sbjct: 43  KGVFDRMPRWSLGSWTALLSAFALSGHHEEAKTLFDTMQERDL-IAWTIMLTVLAT---- 97

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
           F ++   + H + +     RD+   T+++        +E+ R  FD M E N+ SWTSLL
Sbjct: 98  FSNIEDAKYHFDQMPE---RDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWTSLL 154

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y R+        +F  M     + N   ++ +L   +  G V  A +       +  E
Sbjct: 155 SAYGRSGDVKAAGRVFDSMP----EWNLVAWTAMLTGYSLSGDVVRAKR----AFDSMPE 206

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                  A++S Y  +  +R  R +F  M +RD I+W +MVA  V N+L  E+ E F+ M
Sbjct: 207 RDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRM 266

Query: 272 GL-----AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
                   G    R TF++++  C+    L   R++H+ V + G D D  +   L+  Y 
Sbjct: 267 PRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYG 326

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           +CG + DA  +F  MR  +DV+SW++MIS   Q G +D A+  + +M  EG  P+   + 
Sbjct: 327 RCGALGDAKIVFDGMRR-RDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFI 385

Query: 387 IILTAQPAVSPFQVHAHIIK-----TNYEKSFSVGTALLNAYVKKGILDEAAKVFELID- 440
            +L A       +      +     T  E +      +++   + G L +A  +  L+  
Sbjct: 386 SVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPF 445

Query: 441 EKDIVAWSAMLAG---YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
               + +  ML+    Y  +   E A ++  +L  E   P   T +++ +A   P  A  
Sbjct: 446 HPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPY-ITLANIYSAAKRPKDAAR 504

Query: 498 QGKQFHACSIKAK 510
             K      IK K
Sbjct: 505 IRKLMEERGIKKK 517



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 40/262 (15%)

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS---------- 472
           + + G ++ A ++F+ I ++D  +W  ML+ YA+ GD   A  ++ ++            
Sbjct: 2   FGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALL 61

Query: 473 ----------------EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
                           + ++  +    +++    A  + +E  K +H   +  +    L 
Sbjct: 62  SAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAK-YHFDQMPER---DLV 117

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
             +A++   +++G +E+A E F +  +R+L SW S++  Y + G  K A  VF  M    
Sbjct: 118 AWTAMLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFDSMP--- 174

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
            E++ + +  ++T  + +G V   ++ FD M     I      ++ M+  Y+  G L   
Sbjct: 175 -EWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLI-----AWTAMLSAYAFNGHLRYT 228

Query: 637 MDIINRMPFAASATVWRTVLAA 658
            +I  RMP       W T++AA
Sbjct: 229 REIFQRMP-ERDLISWATMVAA 249



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 10/135 (7%)

Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
           M+ + G +E A ++F     RD  SW  M+  YA+ G    A  VF  M R  L     +
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG----S 56

Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  +++A   +G  +E +  FD M     I      ++ M+ + +    +E A    ++M
Sbjct: 57  WTALLSAFALSGHHEEAKTLFDTMQERDLI-----AWTIMLTVLATFSNIEDAKYHFDQM 111

Query: 644 PFAASATVWRTVLAA 658
           P       W  +LAA
Sbjct: 112 P-ERDLVAWTAMLAA 125


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/615 (37%), Positives = 354/615 (57%), Gaps = 54/615 (8%)

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI-DFDHNIRTGLMVAYSKCGKMED 333
           G  L R +F  ++K  +    L L  ++H    K G    D  I++ L+  Y+ CG++ D
Sbjct: 110 GFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMD 169

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A  +F  M   +DVV+W  MI G+ QN   D  +  + +M   G  P+      +L+A  
Sbjct: 170 ARFLFDKMSH-RDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACA 228

Query: 394 AV---------------SPFQVHAHI----------------IKTNYE----KSFSVGTA 418
                            + F+V +HI                 +  Y+    K   V TA
Sbjct: 229 HAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTA 288

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           +L+ Y K G++ +A  +F+ + EKD+V WSAM++GYA+      A++++ ++    + P+
Sbjct: 289 MLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPD 348

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           + T  SVI+AC A   A+ Q K  H  + K      L +++AL+ MY+K GN+  A EVF
Sbjct: 349 QITMLSVISAC-ANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVF 407

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
           +   +++++SW+SMI  +A HG    A+ +F  M+ Q++E +G+TFIGV+ AC+HAGLV+
Sbjct: 408 ENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVE 467

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           EGQ++F  M+NEH I P  EHY CMVDLY RA  L KAM++I  MPF  +  +W ++++A
Sbjct: 468 EGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSA 527

Query: 659 C--------------RLISLQP-HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
           C              RL+ L+P HD A+ V+LSN+YA    W +   VRKLM  + V KE
Sbjct: 528 CQNHGEIELGEFAATRLLELEPDHDGAL-VVLSNIYAKEKRWDDVGLVRKLMKHKGVSKE 586

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHK 763
              S IEV N+ + F+  D  H QS++IY KL+ + ++LK  GY P TS +L D+++E K
Sbjct: 587 KACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEK 646

Query: 764 EAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNR 823
           + ++  HSE+LA+ +GL+     + ++IVKNLR+C DCH+ +KL+SK+ R +IV+RD  R
Sbjct: 647 KEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTR 706

Query: 824 FHHFKEGLCSCGDYW 838
           FHHF  G+CSC DYW
Sbjct: 707 FHHFNGGICSCRDYW 721



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 219/471 (46%), Gaps = 47/471 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           SLF   P       N+LL ++ R    +  L+L+L +RR G PL   +   +LK    L 
Sbjct: 70  SLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLS 129

Query: 93  DHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               G ++H    K GF   D  + ++L+ +Y     + D R +FD M+  +VV+W  ++
Sbjct: 130 ALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMI 189

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            GY++N   D VL+L+  M+  G +P++    TVL   A  G ++    +H  +  NG  
Sbjct: 190 DGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFR 249

Query: 212 VVTSVCNALISMY---------------LKSK----------------MVRDARAVFDGM 240
           V + +  +L++MY               L SK                MV+DAR +FD M
Sbjct: 250 VGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRM 309

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            ++D + W++M++GY  +   +EA + FN M        + T +SVI  CA    L  A+
Sbjct: 310 VEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAK 369

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +H+   KNG      I   L+  Y+KCG +  A ++F  M   K+V+SW++MI+    +
Sbjct: 370 WIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPR-KNVISWSSMINAFAMH 428

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---------VHAHIIKTNYEK 411
           G  D A+  F +M  + + PNG T+  +L A       +         ++ H I    E 
Sbjct: 429 GDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREH 488

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
                  +++ Y +   L +A ++ E +    +++ W ++++     G+ E
Sbjct: 489 Y----GCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIE 535



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 160/365 (43%), Gaps = 32/365 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+   R+ V +N ++  Y +++ +   L L+  ++  G       L +VL  C    +
Sbjct: 173 LFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGN 232

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYM----------------------------- 124
             +G+ +H     +GF    ++ TSLV++Y                              
Sbjct: 233 LSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSG 292

Query: 125 --RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
             +   V+D R +FD M E ++V W++++SGYA +      L+LF+ MQ   I P+  T 
Sbjct: 293 YAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITM 352

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
            +V+   A+ G +  A  +HT   KNG      + NALI MY K   +  AR VF+ M  
Sbjct: 353 LSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPR 412

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           ++ I+W+SM+  +  +     A   F+ M     E    TF+ V+  C+    +   ++ 
Sbjct: 413 KNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKF 472

Query: 303 HSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
            S ++            G MV  Y +   +  A ++   M    +V+ W +++S    +G
Sbjct: 473 FSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHG 532

Query: 362 AIDLA 366
            I+L 
Sbjct: 533 EIELG 537



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/411 (20%), Positives = 184/411 (44%), Gaps = 45/411 (10%)

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
           L A+ K LR  +Q+H+Q+L++ +D + N+    +V           S +   +     + 
Sbjct: 18  LLASCKTLRHVKQIHAQILRSKMD-NSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIP 76

Query: 349 SWTAMISGHL-----QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
           +     S  L     +    +  ++ +  + R G   + F++  +L A   +S      +
Sbjct: 77  NPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLE 136

Query: 400 VHAHIIKTNYEKSFS-VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           +H    K  +  +   + +AL+  Y   G + +A  +F+ +  +D+V W+ M+ GY+Q  
Sbjct: 137 IHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNA 196

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
             +  +K+Y ++ + G +P+     +V++AC A +  +  GK  H             + 
Sbjct: 197 HYDHVLKLYEEMKTSGTEPDAIILCTVLSAC-AHAGNLSYGKAIHQFIKDNGFRVGSHIQ 255

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK--------------- 563
           ++LV MY+  G +  A EV+ +   + +V   +M+ GYA+ G  +               
Sbjct: 256 TSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLV 315

Query: 564 ----------------KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM 607
                           +AL++F EM+R+ +  D IT + VI+AC + G + +  ++    
Sbjct: 316 CWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQA-KWIHTY 374

Query: 608 VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
            +++    T+   + ++D+Y++ G L KA ++   MP   +   W +++ A
Sbjct: 375 ADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINA 424


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/661 (33%), Positives = 365/661 (55%), Gaps = 55/661 (8%)

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
           R A+ +FD +   D  T +++++ + T  L  EA   + ++   G +   S F++V K C
Sbjct: 83  RRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKAC 142

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
             + +    +++H   ++ G+  D  +   L+ AY KC  +E A ++F  +  +KDVVSW
Sbjct: 143 GASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDL-VVKDVVSW 201

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
           T+M S ++  G   L +  FC+M   GV+PN  T S IL A   +   +    +H   ++
Sbjct: 202 TSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVR 261

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY------------ 454
               ++  V +AL++ Y +   + +A  VF+L+  +D+V+W+ +L  Y            
Sbjct: 262 HGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLAL 321

Query: 455 -----------------------AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
                                   + G TE AV++ R++ + G KPN+ T SS + AC+ 
Sbjct: 322 FSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSI 381

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
             + +  GK+ H    +  L   L   +ALV MY+K G++  +  VF    ++D+V+WN+
Sbjct: 382 LES-LRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNT 440

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           MI   A HG+ ++ L +F+ M +  ++ + +TF GV++ C+H+ LV+EG Q F+ M  +H
Sbjct: 441 MIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDH 500

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----------- 660
            + P   HY+CMVD++SRAG L +A + I RMP   +A+ W  +L ACR           
Sbjct: 501 LVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKIS 560

Query: 661 ---LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS 717
              L  ++P++   YV L N+      W E +  R LM +R + K  G SW++V ++ ++
Sbjct: 561 ANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHT 620

Query: 718 FLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIA 777
           F+ GD ++ +S++IY+ L+EL  ++K AGYKPDT YVLQDID E K   L  HSE+LA+A
Sbjct: 621 FVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVA 680

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           FG++     + +++ KNLR+CGDCH  IK +SK+    I+VRD+ RFHHF+ G CSC D 
Sbjct: 681 FGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDL 740

Query: 838 W 838
           W
Sbjct: 741 W 741



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 224/500 (44%), Gaps = 66/500 (13%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++ Q LFD  PQ +    + L+  +    L  EA+ L+  +R  G+    S   +V K C
Sbjct: 83  RRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKAC 142

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G   D    ++VH + ++ G   D  +  +L+  Y +   VE  RRVFDD+   +VVSWT
Sbjct: 143 GASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWT 202

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S+ S Y    +    L +F  M   G+KPNS T S++L   ++   + +   +H   +++
Sbjct: 203 SMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRH 262

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G      VC+AL+S+Y +   V+ AR VFD M  RD ++WN ++  Y TN  + +    F
Sbjct: 263 GMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALF 322

Query: 269 NNMGLAGAELTRSTFVSVI-----------------------------------KLCATT 293
           + M   G E   +T+ +VI                                     C+  
Sbjct: 323 SQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSIL 382

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           + LR+ +++H  V ++ +  D    T L+  Y+KCG +  +  +F M+   KDVV+W  M
Sbjct: 383 ESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICR-KDVVAWNTM 441

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF 413
           I  +  +G     +  F  M + G++PN  T++ +L+          H+ +++   +   
Sbjct: 442 IIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCS-------HSRLVEEGLQIFN 494

Query: 414 SVG------------TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDT 460
           S+G              +++ + + G L EA +  + +  E    AW A+L         
Sbjct: 495 SMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALL--------- 545

Query: 461 EGAVKIYRQLTSEGVKPNEF 480
            GA ++Y+ +    +  N+ 
Sbjct: 546 -GACRVYKNVELAKISANKL 564



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 218/474 (45%), Gaps = 54/474 (11%)

Query: 128 NVEDGRR---VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
           NV D RR   +FD++ + +  + ++L+S +    + +  + L+  ++  GIKP++  F T
Sbjct: 78  NVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLT 137

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           V       G  +   +VH   I+ G      + NALI  Y K K V  AR VFD +  +D
Sbjct: 138 VAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKD 197

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++W SM + YV   L       F  MG  G +    T  S++  C+  K+L+  R +H 
Sbjct: 198 VVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHG 257

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
             +++G+  +  + + L+  Y++C  ++ A  +F +M   +DVVSW  +++ +  N   D
Sbjct: 258 FAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPH-RDVVSWNGVLTAYFTNREYD 316

Query: 365 LAVNFFCQMTREGV-----------------------------------RPNGFTYSIIL 389
             +  F QM+ +GV                                   +PN  T S  L
Sbjct: 317 KGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFL 376

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   +       +VH ++ +       +  TAL+  Y K G L+ +  VF++I  KD+V
Sbjct: 377 PACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVV 436

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHA 504
           AW+ M+   A  G+    + ++  +   G+KPN  TF+ V++ C+  S  VE+G Q F++
Sbjct: 437 AWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSH-SRLVEEGLQIFNS 495

Query: 505 CS----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMI 553
                 ++   N+  C    +V ++S+ G +  A E  +R       S W +++
Sbjct: 496 MGRDHLVEPDANHYAC----MVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALL 545



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 142/296 (47%), Gaps = 12/296 (4%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+ A    G    A ++F  + +  D  + + +IS     G  + A+  +  +   G++P
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQ-PDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKP 130

Query: 381 NGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           +    S+ LT   A           +VH   I+        +G AL++AY K   ++ A 
Sbjct: 131 HN---SVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGAR 187

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF+ +  KD+V+W++M + Y   G     + ++ ++   GVKPN  T SS++ AC+   
Sbjct: 188 RVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELK 247

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             ++ G+  H  +++  +   + V SALV++Y++  +++ A  VF     RD+VSWN ++
Sbjct: 248 -DLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVL 306

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
             Y  +    K L +F +M  + +E D  T+  VI  C   G  ++  +    M N
Sbjct: 307 TAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQN 362



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 3/244 (1%)

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           +G  LL A +  G    A ++F+ I + D    S +++ +   G    A+++Y  L + G
Sbjct: 68  LGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG 127

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +KP+   F +V  AC A S    + K+ H  +I+  + +   + +AL+  Y K   +E A
Sbjct: 128 IKPHNSVFLTVAKACGA-SGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGA 186

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
             VF     +D+VSW SM   Y   G  +  L VF EM    ++ + +T   ++ AC+  
Sbjct: 187 RRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSEL 246

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
             +  G+      V  H +   +   S +V LY+R   +++A  + + MP       W  
Sbjct: 247 KDLKSGRAIHGFAV-RHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPH-RDVVSWNG 304

Query: 655 VLAA 658
           VL A
Sbjct: 305 VLTA 308


>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g32430, mitochondrial; Flags: Precursor
 gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
 gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
 gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 258/753 (34%), Positives = 414/753 (54%), Gaps = 45/753 (5%)

Query: 26  FYS--KKDQSLFDRSPQRN-FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS 82
           FYS  +    LFD S QRN     N  + E  R +    AL++F     L L  FG  + 
Sbjct: 20  FYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFK--ENLQLGYFGRHMD 77

Query: 83  SV---LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
            V   L    C  D   G Q+H     SGF   V VS +++ +Y +    ++   +F+++
Sbjct: 78  EVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL 137

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV-LADEGIVATA 198
            + +VVSW ++LSG+  N++    L    RM+  G+  ++FT+ST L   +  EG +   
Sbjct: 138 VDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL-LG 193

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT- 257
           +Q+ + V+K G E    V N+ I+MY +S   R AR VFD M  +D I+WNS+++G    
Sbjct: 194 LQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 253

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                EA   F +M   G EL   +F SVI  C    +L+LARQ+H   +K G +    +
Sbjct: 254 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV 313

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              LM  YSKCG +E    +F  M E ++VVSWT MIS +      D AV+ F  M  +G
Sbjct: 314 GNILMSRYSKCGVLEAVKSVFHQMSE-RNVVSWTTMISSNK-----DDAVSIFLNMRFDG 367

Query: 378 VRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           V PN  T+  ++ A    +      ++H   IKT +    SVG + +  Y K   L++A 
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 427

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-AP 492
           K FE I  ++I++W+AM++G+AQ G +  A+K++    +E + PNE+TF SV+NA   A 
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAE 486

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
             +V+QG++ HA  +K  LN+   VSSAL+ MY+K+GNI+ + +VF    +++   W S+
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I  Y+ HG  +  + +F +M ++++  D +TF+ V+TAC   G+VD+G + F++M+  ++
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYN 606

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----------- 661
           + P+ EHYSCMVD+  RAG L++A ++++ +P     ++ +++L +CRL           
Sbjct: 607 LEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVA 666

Query: 662 ---ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS- 717
              + ++P  S  YV + N+YA    W + A +RK M  + V KEAG+SWI+V +   S 
Sbjct: 667 ELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSL 726

Query: 718 ----FLAGDISHPQSNQIYSKLEELSTRLKDAG 746
               F +GD SHP+S++IY  +E +   +   G
Sbjct: 727 TMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 218/610 (35%), Positives = 341/610 (55%), Gaps = 55/610 (9%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           ++  V +       L+L  Q+H+ +L  G+     + + ++  Y+  G ++ +  +F+ +
Sbjct: 72  SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-- 399
            E   ++ + +MI  + + G  +  V  +  M   G   + FT+  +L +   +      
Sbjct: 132 GEPSSLL-FNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMG 190

Query: 400 --VHAHIIKTNYEKSFSVGT-------------------------------ALLNAYVKK 426
             VH  I++   +    V T                               ALL  Y K 
Sbjct: 191 KCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKS 250

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE--GVKPNEFTFSS 484
           G +D A  +FE +  ++IV+W+ M++GY+Q G  + A+ ++ ++  E  GV+PN  T  S
Sbjct: 251 GCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMS 310

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR--QR 542
           V+ AC A  + +E+G+Q H  + +  LN+   V  AL  MY+K G++  A   F +  + 
Sbjct: 311 VLPAC-AQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRN 369

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           +++L++WN+MI  YA +GH  +A+  F+EM +  ++ D ITF G+++ C+H+GLVD G +
Sbjct: 370 EKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLK 429

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-- 660
           YF+ M   + I P +EHY+C+ DL  RAG L +A  ++  MP  A  ++W ++LAACR  
Sbjct: 430 YFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKH 489

Query: 661 ------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                       L  L+P ++  YVLLSNMYA  G WQE  ++R ++  +  KK  G SW
Sbjct: 490 RNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSW 549

Query: 709 IEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILS 768
           IE+  K + FL GD SHPQ  +IY  LE L  ++K AGY PDTSYVL DI +E KE  L 
Sbjct: 550 IEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLI 609

Query: 769 QHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            HSE+LA+AFG++ TPA   L++ KNLR+CGDCHT +  IS++  R+++VRD NRFHHFK
Sbjct: 610 AHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFK 669

Query: 829 EGLCSCGDYW 838
            G CSCGDYW
Sbjct: 670 GGCCSCGDYW 679



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 192/424 (45%), Gaps = 41/424 (9%)

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
            P   +++ V   L    ++    QVH  ++  G +    V + +++ Y  S  +  + +
Sbjct: 67  PPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVS 126

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           VF+G+ +  S+ +NSM+  Y           T+ +M   G      TF  V+K       
Sbjct: 127 VFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLS 186

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR------------- 342
           + + + +H  +L+ G+ FD  + T L++ Y KCG++ DA K+F  M              
Sbjct: 187 VWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAG 246

Query: 343 -----------------EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE--GVRPNGF 383
                              +++VSWT MISG+ Q+G    A++ F +M +E  GVRPN  
Sbjct: 247 YTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWV 306

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T   +L A   +S      Q+H    +     + SV  AL   Y K G L +A   F+ +
Sbjct: 307 TIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKL 366

Query: 440 --DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
             +EK+++AW+ M+  YA  G    AV  +R++   G++P++ TF+ +++ C+  S  V+
Sbjct: 367 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH-SGLVD 425

Query: 498 QG-KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICG 555
            G K F+  S    +N  +   + +  +  + G +  AS++          S W S++  
Sbjct: 426 VGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485

Query: 556 YAQH 559
             +H
Sbjct: 486 CRKH 489



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G QVH   +  G      V + +V  Y  + +++    VF+ + E + + + S++  YA
Sbjct: 88  LGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYA 147

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           R    +R +  +  M   G   + FTF  VL    +   V     VH ++++ G +    
Sbjct: 148 RYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLY 207

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM---- 271
           V  +LI +Y K   + DA  VFD M  RD  +WN+++AGY  +     A   F  M    
Sbjct: 208 VATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRN 267

Query: 272 --------------GLA---------------GAELTRSTFVSVIKLCATTKELRLARQL 302
                         GLA               G      T +SV+  CA    L   RQ+
Sbjct: 268 IVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQI 327

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM-REMKDVVSWTAMISGHLQNG 361
           H    + G++ + ++   L   Y+KCG + DA   F  + R  K++++W  MI+ +   G
Sbjct: 328 HELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYG 387

Query: 362 AIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
               AV+ F +M + G++P+  T++ +L+ 
Sbjct: 388 HGLQAVSTFREMIQAGIQPDDITFTGLLSG 417



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 163/381 (42%), Gaps = 58/381 (15%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F+   + + + +N ++  Y R    +  +  +  +   G      T   VLK+   L 
Sbjct: 126 SVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELL 185

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN------------ 140
               G+ VH   ++ G   D+ V+TSL+ LY +   + D  +VFD+M             
Sbjct: 186 SVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLA 245

Query: 141 -------------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE--GIKPNS 179
                                N+VSWT+++SGY+++ +  + L LF  M  E  G++PN 
Sbjct: 246 GYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW 305

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            T  +VL   A    +    Q+H +  + G     SV  AL +MY K   + DAR  FD 
Sbjct: 306 VTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDK 365

Query: 240 ME--DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           +   +++ I WN+M+  Y +    ++A  TF  M  AG +    TF  ++  C+      
Sbjct: 366 LNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCS------ 419

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMV------------AYSKCGKMEDASKIFSMMREMK 345
                HS ++  G+ + +++ T   +               + G++ +ASK+   M    
Sbjct: 420 -----HSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPA 474

Query: 346 DVVSWTAMISGHLQNGAIDLA 366
               W ++++   ++  +++A
Sbjct: 475 GPSIWGSLLAACRKHRNLEMA 495


>gi|357111099|ref|XP_003557352.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 685

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/659 (34%), Positives = 348/659 (52%), Gaps = 89/659 (13%)

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLC 290
           +AR + D    R +  W + +AG   +  HM+    F  M    GAE       +V++ C
Sbjct: 64  NARKLLDETPKRSASAWTAFIAGCARSGRHMDGLSAFTEMRAKGGAEPNAFVLAAVLRCC 123

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE------- 343
           A  +++   + +H  +L+NG   D  +   ++  Y+KCG  E   + F  M +       
Sbjct: 124 AGLRDMESGKCIHGWMLRNGAHLDVVLCNAVLDMYAKCGDYECTKRAFKAMTKIDAVSWN 183

Query: 344 -----------------------MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
                                  ++D  SW  +ISG ++NG    A++   +M R  V  
Sbjct: 184 IVISACMQNGDILGSMQLFDVSPLRDTSSWNTVISGLMRNGCAAKALDCLYRMARARVVF 243

Query: 381 NGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N +TYS  L     +S      Q+H  ++    +    V ++L++ Y K G ++ A  +F
Sbjct: 244 NHYTYSTALALAGMLSLQDLGRQLHGRVLTAAVDTDAFVRSSLMDMYCKCGSMETAVLIF 303

Query: 437 ELIDE--KDI-VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +   +   D+  AWSAM+AGY Q G  E A + +R +  EGV  ++FT +S I AC A +
Sbjct: 304 DSWSQLTGDMNFAWSAMVAGYVQNGREEEAFEFFRSMLREGVAAHQFTLTSAIAAC-ANA 362

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             VEQG+                                    +F R   +++  W SM+
Sbjct: 363 GMVEQGR------------------------------------IFDRACAKNVALWTSML 386

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
           C YA HG  + A+E+F  M  + +  + IT +GV++AC+H  LV+EG  +F +M +E+ I
Sbjct: 387 CSYASHGKGRMAIELFNRMTAEKITPNEITLVGVLSACSHGRLVNEGDHFFKLMQDEYGI 446

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL------------ 661
            P++EHY+CMVDLY RAGML KA + I        A VW+T+L+ACRL            
Sbjct: 447 VPSIEHYNCMVDLYGRAGMLYKAHNFIKENNIKHEAIVWKTLLSACRLHKHMEYAKLASE 506

Query: 662 --ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
             I L+  D+  YV+LSN+YA    W + +++R  M +R+V K+ G SWI +KN  ++F+
Sbjct: 507 NLIQLEECDAGSYVMLSNVYATHSKWLDTSKLRSSMRERRVWKQPGRSWIHLKNIMHTFV 566

Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
           AGD +HP+S +IY+ LE+L  RLKD GY   T  V  D+++E +E  L  HSE+LAIAFG
Sbjct: 567 AGDTAHPRSAEIYAYLEKLMERLKDLGYTSRTDLVAHDVEEEQRETALKFHSEKLAIAFG 626

Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +++TP+G PL+I KNLRVC DCH  IK +S+   R+IVVRD  RFHHFK+  CSC D+W
Sbjct: 627 IISTPSGTPLRIFKNLRVCVDCHEAIKYVSQATDREIVVRDLYRFHHFKDAKCSCEDFW 685



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/495 (23%), Positives = 213/495 (43%), Gaps = 67/495 (13%)

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           + G AR      SL    +R ++  + R++ D+  + +  +WT+ ++G AR+  +   L 
Sbjct: 39  EKGLARISQEIVSLPISCVRGHHFHNARKLLDETPKRSASAWTAFIAGCARSGRHMDGLS 98

Query: 166 LFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
            F  M+ +G  +PN+F  + VL   A    + +   +H  +++NG  +   +CNA++ MY
Sbjct: 99  AFTEMRAKGGAEPNAFVLAAVLRCCAGLRDMESGKCIHGWMLRNGAHLDVVLCNAVLDMY 158

Query: 225 LKSKMVRDARAVFDGMED-------------------------------RDSITWNSMVA 253
            K       +  F  M                                 RD+ +WN++++
Sbjct: 159 AKCGDYECTKRAFKAMTKIDAVSWNIVISACMQNGDILGSMQLFDVSPLRDTSSWNTVIS 218

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           G + N    +A +    M  A       T+ + + L        L RQLH +VL   +D 
Sbjct: 219 GLMRNGCAAKALDCLYRMARARVVFNHYTYSTALALAGMLSLQDLGRQLHGRVLTAAVDT 278

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV--SWTAMISGHLQNGAIDLAVNFFC 371
           D  +R+ LM  Y KCG ME A  IF    ++   +  +W+AM++G++QNG  + A  FF 
Sbjct: 279 DAFVRSSLMDMYCKCGSMETAVLIFDSWSQLTGDMNFAWSAMVAGYVQNGREEEAFEFFR 338

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
            M REGV  + FT                                T+ + A    G++ E
Sbjct: 339 SMLREGVAAHQFTL-------------------------------TSAIAACANAGMV-E 366

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
             ++F+    K++  W++ML  YA  G    A++++ ++T+E + PNE T   V++AC+ 
Sbjct: 367 QGRIFDRACAKNVALWTSMLCSYASHGKGRMAIELFNRMTAEKITPNEITLVGVLSACSH 426

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWN 550
                E    F     +  +  ++   + +V +Y + G +  A    K    K + + W 
Sbjct: 427 GRLVNEGDHFFKLMQDEYGIVPSIEHYNCMVDLYGRAGMLYKAHNFIKENNIKHEAIVWK 486

Query: 551 SMICGYAQHGHTKKA 565
           +++     H H + A
Sbjct: 487 TLLSACRLHKHMEYA 501



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 167/416 (40%), Gaps = 72/416 (17%)

Query: 11  INPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR 70
           I+ +    P S     +    + L D +P+R+   +   +    R   H + L+ F  +R
Sbjct: 45  ISQEIVSLPISCVRGHHFHNARKLLDETPKRSASAWTAFIAGCARSGRHMDGLSAFTEMR 104

Query: 71  -RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
            + G       L++VL+ C  L D   G+ +H   +++G   DV +  +++D+Y +  + 
Sbjct: 105 AKGGAEPNAFVLAAVLRCCAGLRDMESGKCIHGWMLRNGAHLDVVLCNAVLDMYAKCGDY 164

Query: 130 EDGRRVFDDMNESNVV-------------------------------SWTSLLSGYARNK 158
           E  +R F  M + + V                               SW +++SG  RN 
Sbjct: 165 ECTKRAFKAMTKIDAVSWNIVISACMQNGDILGSMQLFDVSPLRDTSSWNTVISGLMRNG 224

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
              + L+  +RM    +  N +T+ST L +     +     Q+H  V+    +    V +
Sbjct: 225 CAAKALDCLYRMARARVVFNHYTYSTALALAGMLSLQDLGRQLHGRVLTAAVDTDAFVRS 284

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRD---SITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           +L+ MY K   +  A  +FD         +  W++MVAGYV N    EAFE F +M   G
Sbjct: 285 SLMDMYCKCGSMETAVLIFDSWSQLTGDMNFAWSAMVAGYVQNGREEEAFEFFRSMLREG 344

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
               + T  S I  CA           ++ +++ G  FD             C       
Sbjct: 345 VAAHQFTLTSAIAACA-----------NAGMVEQGRIFDR-----------ACA------ 376

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
                    K+V  WT+M+  +  +G   +A+  F +MT E + PN  T   +L+A
Sbjct: 377 ---------KNVALWTSMLCSYASHGKGRMAIELFNRMTAEKITPNEITLVGVLSA 423



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           ++ G A      TS +        VE GR +FD     NV  WTS+L  YA +      +
Sbjct: 341 LREGVAAHQFTLTSAIAACANAGMVEQGR-IFDRACAKNVALWTSMLCSYASHGKGRMAI 399

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV--CNALIS 222
           ELF+RM  E I PN  T   VL   +   +V        ++    G +V S+   N ++ 
Sbjct: 400 ELFNRMTAEKITPNEITLVGVLSACSHGRLVNEGDHFFKLMQDEYG-IVPSIEHYNCMVD 458

Query: 223 MYLKSKMVRDARA-VFDGMEDRDSITWNSMVAG------------YVTNELHMEAFETFN 269
           +Y ++ M+  A   + +     ++I W ++++                N + +E  +  +
Sbjct: 459 LYGRAGMLYKAHNFIKENNIKHEAIVWKTLLSACRLHKHMEYAKLASENLIQLEECDAGS 518

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
            + L+    T S ++   KL ++ +E R+ +Q
Sbjct: 519 YVMLSNVYATHSKWLDTSKLRSSMRERRVWKQ 550


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 231/672 (34%), Positives = 370/672 (55%), Gaps = 55/672 (8%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI + L       AR +FD +   D  T +++++   T+ L  EA + ++++   G +  
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
              F++  K CA + +    +++H    + G+  D  +   L+ AY KC  +E A ++F 
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF- 398
            +  ++DVVSWT++ S +++ G     ++ F +M   GV+PN  T S IL A   +    
Sbjct: 224 DL-VVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 282

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY- 454
              ++H   ++     +  V +AL++ Y K   + EA  VF+L+  +D+V+W+ +L  Y 
Sbjct: 283 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342

Query: 455 ----------------------------------AQIGDTEGAVKIYRQLTSEGVKPNEF 480
                                              + G +E AV+++R++   G KPNE 
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T SS++ AC+  S  +  GK+ H    +      L  ++AL+ MY+K G++  +  VF  
Sbjct: 403 TISSILPACSF-SENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 461

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
            R++D+V+WN+MI   A HG+ K+AL +F +M    ++ + +TF GV++ C+H+ LV+EG
Sbjct: 462 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 521

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            Q F+ M  +H + P   HYSC+VD+YSRAG L +A   I  MP   +A+ W  +LAACR
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 581

Query: 661 --------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                         L  ++P++   YV L N+      W E ++VR LM +R + K  G 
Sbjct: 582 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 641

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SW++V NK ++F+ GD S+ +S++IY+ L+EL  ++K AGYKPDT YVLQDID E K   
Sbjct: 642 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAES 701

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           L  HSE+LA+AFG++     + +++ KNLR+CGDCH  IK +SK+    IVVRD+ RFHH
Sbjct: 702 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHH 761

Query: 827 FKEGLCSCGDYW 838
           FK G CSC D W
Sbjct: 762 FKNGNCSCKDLW 773



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 218/472 (46%), Gaps = 56/472 (11%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + LFD  PQ +    + L+       L  EA+ ++  ++  G+        +  K C 
Sbjct: 116 RARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACA 175

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
              D +  ++VH +  + G   DV V  +L+  Y +   VE  RRVFDD+   +VVSWTS
Sbjct: 176 VSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTS 235

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L S Y +     + +++F  M   G+KPN  T S++L   A+   + +  ++H   +++G
Sbjct: 236 LSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHG 295

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE---------L 260
             V   VC+AL+S+Y K   VR+AR VFD M  RD ++WN ++  Y  N+         L
Sbjct: 296 MVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFL 355

Query: 261 HM--------------------------EAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            M                          EA E F  M   G +    T  S++  C+ ++
Sbjct: 356 KMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSE 415

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            LR+ +++H  V ++    D    T L+  Y+KCG +  +  +F MMR  KDVV+W  MI
Sbjct: 416 NLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRR-KDVVAWNTMI 474

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
             +  +G    A+  F +M    V+PN  T++ +L+          H+ +++   +   S
Sbjct: 475 IANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS-------HSRLVEEGVQIFNS 527

Query: 415 VG------------TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAG 453
           +G            + +++ Y + G L+EA K  + +  E    AW A+LA 
Sbjct: 528 MGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 217/460 (47%), Gaps = 50/460 (10%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+ + +   +    R++FD++ + +  + ++L+S    + +++  ++++  +Q  GIKP+
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
              F       A  G      +VH    + G      V NALI  Y K K V  AR VFD
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            +  RD ++W S+ + YV      +  + F  MG +G +    T  S++  CA  K+L+ 
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS--------- 349
            +++H   +++G+  +  + + L+  Y+KC  + +A  +F +M   +DVVS         
Sbjct: 284 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH-RDVVSWNGVLTAYF 342

Query: 350 --------------------------WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
                                     W A+I G ++NG  + AV  F +M + G +PN  
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T S IL A           ++H ++ +       +  TALL  Y K G L+ +  VF+++
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 462

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             KD+VAW+ M+   A  G+ + A+ ++ ++    V+PN  TF+ V++ C+  S  VE+G
Sbjct: 463 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH-SRLVEEG 521

Query: 500 KQ-FHACS----IKAKLNNALCVSSALVTMYSKKGNIESA 534
            Q F++      ++   N+  CV    V +YS+ G +  A
Sbjct: 522 VQIFNSMGRDHLVEPDANHYSCV----VDIYSRAGRLNEA 557



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 3/244 (1%)

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           +G  L+   +  G  + A ++F+ I + D    S +++     G +  A+KIY  L   G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +KP+   F +   AC     A+ + K+ H  + +  + + + V +AL+  Y K   +E A
Sbjct: 160 IKPDMPVFLAAAKACAVSGDAL-RVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 218

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
             VF     RD+VSW S+   Y + G  +K ++VF+EM    ++ + +T   ++ AC   
Sbjct: 219 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 278

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
             +  G++     V  H +   +   S +V LY++   + +A  + + MP     + W  
Sbjct: 279 KDLKSGKEIHGFAV-RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVS-WNG 336

Query: 655 VLAA 658
           VL A
Sbjct: 337 VLTA 340



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 54/328 (16%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFL-----GIR------------- 70
           ++ + +FD  P R+ V +N +L  Y ++  +++  +LFL     G+R             
Sbjct: 317 REARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGC 376

Query: 71  -----------------RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDV 113
                            ++G      T+SS+L  C    +   G+++HC   +     D+
Sbjct: 377 MENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDL 436

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
             +T+L+ +Y +  ++   R VFD M   +VV+W +++   A +      L LF +M + 
Sbjct: 437 TSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLS 496

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            ++PNS TF+ VL   +   +V   VQ+ ++M   +  E   +  + ++ +Y ++  + +
Sbjct: 497 RVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNE 556

Query: 233 ARAVFDGME-DRDSITWNSMVAG---YVTNEL-HMEAFETF----NNMGLAGAELTRSTF 283
           A     GM  +  +  W +++A    Y   EL  + A + F    NN G          +
Sbjct: 557 AYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPG---------NY 607

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGI 311
           VS+  +  T K    A Q+   + + GI
Sbjct: 608 VSLFNILVTAKMWSEASQVRILMKERGI 635


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/607 (36%), Positives = 344/607 (56%), Gaps = 50/607 (8%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           S F   I+ C T + L   +QLH  ++ +G   D  I   LM  YSK G    A  ++  
Sbjct: 45  SLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGR 104

Query: 341 MR----------------------------EMKD--VVSWTAMISGHLQNGAIDLAVNFF 370
           MR                            EM D  + +W AMI+G +Q    +  ++ F
Sbjct: 105 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 164

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M   G  P+ +T   + +    +       Q+H + IK   E    V ++L + Y++ 
Sbjct: 165 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 224

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G L +   V   +  +++VAW+ ++ G AQ G  E  + +Y+ +   G +PN+ TF +V+
Sbjct: 225 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 284

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           ++C+   A   QG+Q HA +IK   ++ + V S+L++MYSK G +  A++ F  +   D 
Sbjct: 285 SSCS-DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 343

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           V W+SMI  Y  HG   +A+E+F  M  Q ++E + + F+ ++ AC+H+GL D+G + FD
Sbjct: 344 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFD 403

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------ 659
           +MV ++   P ++HY+C+VDL  RAG L++A  II  MP      +W+T+L+AC      
Sbjct: 404 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 463

Query: 660 --------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    ++ + P+DSA YVLL+N++A+   W++ + VRK M D+ VKKEAG SW E 
Sbjct: 464 EMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEH 523

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           K + + F  GD S  +S +IYS L+EL+  +K  GYKPDT+ VL D+D+E KE+ L QHS
Sbjct: 524 KGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHS 583

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+LA+AF L+  P GAP++I+KNLRVC DCH   K IS ++ R+I +RD +RFHHF  G 
Sbjct: 584 EKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGK 643

Query: 832 CSCGDYW 838
           CSCGDYW
Sbjct: 644 CSCGDYW 650



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 207/458 (45%), Gaps = 47/458 (10%)

Query: 64  NLFLGIRRLGLPLFGST--LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNV------ 115
           NL    +R  L +F +T   +  +++C        G+Q+HC  V SGF+ D  +      
Sbjct: 28  NLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMS 87

Query: 116 -------------------------STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                                    S  L++ Y+R  ++ + R+VFD+M +  + +W ++
Sbjct: 88  MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 147

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++G  + + N+  L LF  M   G  P+ +T  +V    A    V+   Q+H   IK G 
Sbjct: 148 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 207

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E+   V ++L  MY+++  ++D   V   M  R+ + WN+++ G   N         +  
Sbjct: 208 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 267

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M ++G    + TFV+V+  C+        +Q+H++ +K G      + + L+  YSKCG 
Sbjct: 268 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 327

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIIL 389
           + DA+K FS  RE +D V W++MIS +  +G  D A+  F  M  +  +  N   +  +L
Sbjct: 328 LGDAAKAFS-EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 386

Query: 390 TA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            A          +  F +     K  ++      T +++   + G LD+A  +   +  K
Sbjct: 387 YACSHSGLKDKGLELFDMMVE--KYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 444

Query: 443 -DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
            DIV W  +L+      + E A ++++++    + PN+
Sbjct: 445 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 480



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 8/330 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R    +N ++    +   ++E L+LF  +  LG      TL SV      L
Sbjct: 130 RKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 189

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +K G   D+ V++SL  +YMR   ++DG  V   M   N+V+W +L+
Sbjct: 190 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 249

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A+N   + VL L+  M++ G +PN  TF TVL   +D  I     Q+H   IK G  
Sbjct: 250 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 309

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V +V ++LISMY K   + DA   F   ED D + W+SM++ Y  +    EA E FN M
Sbjct: 310 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 369

Query: 272 G-LAGAELTRSTFVSVIKLCATT----KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
                 E+    F++++  C+ +    K L L   +   V K G        T ++    
Sbjct: 370 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM---VEKYGFKPGLKHYTCVVDLLG 426

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           + G ++ A  I   M    D+V W  ++S 
Sbjct: 427 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 34/210 (16%)

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
           N   F+  I +CT    ++  GKQ H   + +  ++   + + L++MYSK G+  SA  V
Sbjct: 43  NTSLFTPFIQSCTT-RQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAV 101

Query: 538 FKRQRK-------------------------------RDLVSWNSMICGYAQHGHTKKAL 566
           + R RK                               R L +WN+MI G  Q    ++ L
Sbjct: 102 YGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGL 161

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
            +F+EM       D  T   V +       V  GQQ     + ++ +   +   S +  +
Sbjct: 162 SLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI-KYGLELDLVVNSSLAHM 220

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           Y R G L+    +I  MP   +   W T++
Sbjct: 221 YMRNGKLQDGEIVIRSMP-VRNLVAWNTLI 249


>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 594

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 222/591 (37%), Positives = 344/591 (58%), Gaps = 41/591 (6%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++  C+  + + L +Q+H   +K G D   ++   L   Y K G +E   + F    + K
Sbjct: 1   MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPD-K 59

Query: 346 DVVSWTAMISGHLQN-GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
           +V++WT MIS   ++   +DL ++ F  M   GV PN FT + +++   A        QV
Sbjct: 60  NVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQV 119

Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
            A   K   E +  V  + +  Y++KG  DEA ++FE +D   I+ W+AM++GYAQI D+
Sbjct: 120 QAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDS 179

Query: 461 EG-----------AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
                        A+K++R L    +KP+ FTFSS+++ C+A   A+EQG+Q HA +IK 
Sbjct: 180 AKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSA-MMALEQGEQIHANTIKT 238

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              + + V+SALV MY+K G+IE A++ F     R  V+W SMI GY+QHG ++ A+++F
Sbjct: 239 GCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLF 298

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           ++M       + ITF+ +++AC++AGLV+E ++YFD+M NE+HI P ++HY CMVD++ R
Sbjct: 299 EDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVR 358

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLL 675
            G L+ A   I R  F  +  +W +++A C              RL+ L+P     YVLL
Sbjct: 359 LGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLL 418

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
            NMY +TG W++ ARVRKL     V      SWI +++K Y F A D++HPQ+ ++Y  L
Sbjct: 419 LNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLL 478

Query: 736 EELSTRLKDAGYK-----PDTSYVLQDIDDEHKEA----ILSQHSERLAIAFGLVATPAG 786
           E L  + K  GY+     P+  +  ++ DD+   A    ++  HSERLA+A GL+ TP G
Sbjct: 479 ENLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPG 538

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           A +++ KN+ +C DCH+ IK  S L  R+IVVRD+ R H FK+G CSCGD+
Sbjct: 539 ATVRVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 589



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 192/384 (50%), Gaps = 18/384 (4%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH   IK G + +TS+ N+L  +Y KS  +      F G  D++ ITW +M++    +E
Sbjct: 16  QVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDE 75

Query: 260 LHME-AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
            +++     F +M   G      T  SV+ LC    ++ L +Q+ +   K G + +  ++
Sbjct: 76  NYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVK 135

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ---NGAIDL--------AV 367
              M  Y + G+ ++A ++F  M +   +++W AMISG+ Q   +   DL        A+
Sbjct: 136 NSTMYLYLRKGETDEAMRLFEEM-DSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQAL 194

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
             F  + R  ++P+ FT+S IL+   A+       Q+HA+ IKT       V +AL+N Y
Sbjct: 195 KLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMY 254

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K G ++ A K F  +  +  V W++M++GY+Q G ++ A++++  +   G +PNE TF 
Sbjct: 255 NKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFV 314

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR- 542
           S+++AC+      E  + F     +  +   +     +V M+ + G ++ A    KR   
Sbjct: 315 SLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGF 374

Query: 543 KRDLVSWNSMICGYAQHGHTKKAL 566
           + +   W+S++ G   HG+ + A 
Sbjct: 375 EPNEAIWSSLVAGCRSHGNMELAF 398



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 191/389 (49%), Gaps = 25/389 (6%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G+QVH   +K G     ++  SL  LY ++ ++E G R F    + NV++WT+++S  A
Sbjct: 13  LGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCA 72

Query: 156 RNK-MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            ++   D  L LF  M   G+ PN FT ++V+ +      ++   QV     K G E   
Sbjct: 73  EDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANL 132

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY------VTNELH-----ME 263
            V N+ + +YL+     +A  +F+ M+    ITWN+M++GY        ++LH      +
Sbjct: 133 PVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQ 192

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A + F ++  +  +    TF S++ +C+    L    Q+H+  +K G   D  + + L+ 
Sbjct: 193 ALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVN 252

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
            Y+KCG +E A+K F  M   +  V+WT+MISG+ Q+G    A+  F  M   G RPN  
Sbjct: 253 MYNKCGSIECATKAFVEM-PTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEI 311

Query: 384 TYSIILTA---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFEL 438
           T+  +L+A      V   + +  +++  Y  E        +++ +V+ G LD+A   F  
Sbjct: 312 TFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDA---FSF 368

Query: 439 ID----EKDIVAWSAMLAGYAQIGDTEGA 463
           I     E +   WS+++AG    G+ E A
Sbjct: 369 IKRTGFEPNEAIWSSLVAGCRSHGNMELA 397



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 194/429 (45%), Gaps = 57/429 (13%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQE-ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           F  +P +N + +  ++     D  + +  L+LFL +   G+     TL+SV+  CG   D
Sbjct: 53  FKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLD 112

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+QV   C K G   ++ V  S + LY+R    ++  R+F++M+ S++++W +++SG
Sbjct: 113 MSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISG 172

Query: 154 YA------RNKMNDR-----VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           YA      ++ ++ R      L+LF  +    +KP+ FTFS++L V +    +    Q+H
Sbjct: 173 YAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIH 232

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
              IK G      V +AL++MY K   +  A   F  M  R  +TW SM++GY  +    
Sbjct: 233 ANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQ 292

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +A + F +M L+GA     TFVS++  C                                
Sbjct: 293 DAIQLFEDMVLSGARPNEITFVSLLSAC-------------------------------- 320

Query: 323 VAYSKCGKMEDASKIFSMMR---EMKDVVS-WTAMISGHLQNGAIDLAVNFFCQMTREGV 378
              S  G +E+A + F MMR    ++ +V  +  M+   ++ G +D A +F   + R G 
Sbjct: 321 ---SYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSF---IKRTGF 374

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE---KSFSVGTALLNAYVKKGILDEAAKV 435
            PN   +S ++    +    ++  +      E   K       LLN Y+  G   + A+V
Sbjct: 375 EPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARV 434

Query: 436 FELIDEKDI 444
            +L   +D+
Sbjct: 435 RKLAKHEDV 443



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 20/263 (7%)

Query: 11  INPQTKQPPKSLRSPFYSKKDQS-----LFDRSPQRNFVEYNRLLFEYC------RDSLH 59
           +  +   P K+     Y +K ++     LF+     + + +N ++  Y       +D LH
Sbjct: 126 VGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLH 185

Query: 60  Q-----EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVN 114
                 +AL LF  + R  L     T SS+L  C  +     G Q+H   +K+G   DV 
Sbjct: 186 ARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVV 245

Query: 115 VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG 174
           V+++LV++Y +  ++E   + F +M     V+WTS++SGY+++  +   ++LF  M + G
Sbjct: 246 VNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSG 305

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSKMVRDA 233
            +PN  TF ++L   +  G+V  A +   M+      E +      ++ M+++   + DA
Sbjct: 306 ARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDA 365

Query: 234 RAVFD--GMEDRDSITWNSMVAG 254
            +     G E  ++I W+S+VAG
Sbjct: 366 FSFIKRTGFEPNEAI-WSSLVAG 387


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/647 (35%), Positives = 360/647 (55%), Gaps = 31/647 (4%)

Query: 220 LISMYLKSKMVRDARAVFDGM--------EDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           LI +Y K   +  AR +FD          +  +S   N+M+  Y       EA + +  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G  +   T+  V+K+CA+         +H QV++ G   D  +   L+  Y+KCG++
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA ++F  M  ++DVV WTAMI+ + Q      A+  F +M  EG   +  T   + +A
Sbjct: 184 GDAHEVFDRML-IRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASA 242

Query: 392 QPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +        VH + +   +    SVG +++  Y K G ++ A  VF+ ++E++ ++W
Sbjct: 243 VGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISW 302

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++ML+GY Q G    A+ ++ Q+ +    PN  T   +++AC+   +    G++ H   I
Sbjct: 303 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSK-HLGRKLHNFVI 361

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR--KRDLVSWNSMICGYAQHGHTKKA 565
            +K++    + +A++ MY K G++++A E+F      +RD+ SWN +I GY  HGH K+A
Sbjct: 362 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 421

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           LE+F  M+ + +E + ITF  +++AC+HAGL+DEG++ F  M  +  + P M+HY+CMVD
Sbjct: 422 LELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVD 480

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
           +  RAG L +A  +I ++P   S  VW  +L ACR              L  L+P  +  
Sbjct: 481 MLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGY 540

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
           YVL+SN+YAA+  W+E   VR+ M  R +KK A +S IE   + + F   D S P   ++
Sbjct: 541 YVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREV 600

Query: 732 YSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
           Y K+E L+  +K  GY PD S VL D++ E KE +L+ HSE+LA+AFG++    G P+Q+
Sbjct: 601 YRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQV 660

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            KNLRVC DCH   K IS +  R I+VRD NRFHHF+ G CSCGDYW
Sbjct: 661 TKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 213/422 (50%), Gaps = 8/422 (1%)

Query: 47  NRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVK 106
           N +L  Y       EA++L++ ++R+G+ +   T   VLK C      VFG  VH + V+
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           +GF  D+ V  +LVD+Y +   + D   VFD M   +VV WT++++ Y + +   + L L
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           F +MQ EG   +  T  +V   +   G    A+ VH   + NG     SV N+++ MY K
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAK 280

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
              V  AR VFD ME+R+ I+WNSM++GY  N    +A   FN M  +  +    T + +
Sbjct: 281 CGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 340

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR-EMK 345
           +  C+      L R+LH+ V+ + +D D  +R  +M  Y KCG ++ A ++F+      +
Sbjct: 341 VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 400

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVH 401
           DV SW  +ISG+  +G    A+  F +M  EGV PN  T++ IL+A           +  
Sbjct: 401 DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 460

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK--DIVAWSAMLAGYAQIGD 459
           A + K +          +++   + G L+EA ++ + I  +  D V W A+L      G+
Sbjct: 461 ADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV-WGALLLACRIHGN 519

Query: 460 TE 461
           TE
Sbjct: 520 TE 521



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 162/352 (46%), Gaps = 9/352 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
             +FDR   R+ V +  ++  Y +     +AL LF  ++  G      T  SV    G L
Sbjct: 187 HEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQL 246

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D      VH   V +GF  DV+V  S+V +Y +  NVE  R VFD M E N +SW S+L
Sbjct: 247 GDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSML 306

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +N      L LF++MQ     PN  T   ++   +  G      ++H  VI +  +
Sbjct: 307 SGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMD 366

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGME--DRDSITWNSMVAGYVTNELHMEAFETFN 269
           + T++ NA++ MY+K   +  A  +F+  E  +RD  +WN +++GY  +    EA E F+
Sbjct: 367 IDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFS 426

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M + G E    TF S++  C+    +   R+  + + K  +  +      ++    + G
Sbjct: 427 RMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAG 486

Query: 330 KMEDASKIFSMMREMKDVVSWTAM-----ISGHLQNGAIDLAVNFFCQMTRE 376
            + +A ++   +        W A+     I G+ + G I  A N   Q+  E
Sbjct: 487 FLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEI--AANNLFQLEPE 536


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/746 (30%), Positives = 400/746 (53%), Gaps = 47/746 (6%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F+  P R+ V +N +L  + +   + E++ +F+ + R G+     + S +LK C  L ++
Sbjct: 138 FEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENY 197

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G Q+H   ++ G+  DV   ++L+D+Y +   +++   VF  M + N +SW+++++G 
Sbjct: 198 KLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGC 257

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +N   D  L++F  MQ  G+  +   +++VL   A    +    Q+H   +K+      
Sbjct: 258 VQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDG 317

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  A + MY K   ++DA+ +FD  E+ +  ++N+M+ GY   +    A   F  +  +
Sbjct: 318 IVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKS 377

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                  +    ++ CAT K L    QLH    K+    +  +    +  Y KC  +++A
Sbjct: 378 SLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEA 437

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            ++F  M   KD VSW A+I+ H QN      +N    M R G+ P+ +T+  +L A   
Sbjct: 438 CRVFDEMGR-KDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG 496

Query: 395 VS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF--------------- 436
            S     ++H  I+K     +  +G++L++ Y K G++DEA K+                
Sbjct: 497 DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSE 556

Query: 437 --ELIDEKD----------IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
             E I+E            IV+W+A+++GY     +E A + + ++   G+ P++FT+S+
Sbjct: 557 HPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYST 616

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           V++ C A  A++  GKQ HA  IK +L   + + S LV MYSK GN+  +  +F++   R
Sbjct: 617 VLDTC-ANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIR 675

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D V+WN+MICGYA HG  ++A+++F+ M   ++  +  TF+ ++ AC H GLV+ G  YF
Sbjct: 676 DFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYF 735

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR---- 660
            +M  E+ + P +EHYS MVD+  ++G +EKA+++I  MPF A   +WRT+L+AC+    
Sbjct: 736 HMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRN 795

Query: 661 -----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
                      L+ L P DS+ Y+LLSN+YA  G W + + +R  M   K+KKE G SW+
Sbjct: 796 NVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWV 855

Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKL 735
           E++++ ++FL GD +HP+  +IY+ L
Sbjct: 856 EIRDEFHTFLVGDKAHPRWKEIYNGL 881



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 171/646 (26%), Positives = 298/646 (46%), Gaps = 75/646 (11%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           +  S V K C     H  G+Q H   + SGF   V VS  L+ LY+   N+    ++FD 
Sbjct: 50  ANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDG 109

Query: 139 MN-------------------------------ESNVVSWTSLLSGYARNKMNDRVLELF 167
           M                                  +VVSW S+LSG+ +   N   +++F
Sbjct: 110 MPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVF 169

Query: 168 HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
             M   G++ ++ +FS +L V +         Q+H + ++ G +      +AL+ MY K 
Sbjct: 170 IEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKC 229

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
           K + ++  VF  M  ++ I+W++++AG V N       + F  M   G  +++S + SV+
Sbjct: 230 KRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVL 289

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           K CAT  +LRL  QLH+  LK+    D  +RT  +  Y+KC  M+DA ++F M   + ++
Sbjct: 290 KSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENL-NL 348

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAH 403
            S+ AMI+G+ Q      A+  F ++++  +  +  + S  L A   V       Q+H  
Sbjct: 349 QSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGL 408

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
             K+N+ ++  V  A ++ Y K   LDEA +VF+ +  KD V+W+A++A + Q  +    
Sbjct: 409 ATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKT 468

Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
           + I   +   G++P+E+TF SV+ AC   S  +  G + H   +K  + +   + S+LV 
Sbjct: 469 LNILVSMLRSGMEPDEYTFGSVLKACAGDS--LNHGMEIHTTIVKLGMASNPYIGSSLVD 526

Query: 524 MYSKKGNIESASEVFK---------------------------RQRKRDLVSWNSMICGY 556
           MYSK G I+ A ++                             R+ +  +VSWN++I GY
Sbjct: 527 MYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGY 586

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
                ++ A   F  M    +  D  T+  V+  C +   +  G+Q     ++ H I   
Sbjct: 587 VMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQ-----IHAHVIKKE 641

Query: 617 MEH--YSC--MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +++  Y C  +VD+YS+ G L  +  +  + P     T W  ++  
Sbjct: 642 LQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVT-WNAMICG 686



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 157/553 (28%), Positives = 281/553 (50%), Gaps = 34/553 (6%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++F   PQ+N++ ++ ++    +++     L +F  ++++G+ +  S  +SVLK+C  L 
Sbjct: 237 TVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLP 296

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   G Q+H   +KS F +D  V T+ +D+Y + NN++D +R+FD     N+ S+ ++++
Sbjct: 297 DLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMIT 356

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY++     R L LF ++    +  +  + S  L   A    ++  +Q+H +  K+    
Sbjct: 357 GYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSR 416

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V NA I MY K + + +A  VFD M  +D+++WN+++A +  NE   +      +M 
Sbjct: 417 NICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSML 476

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +G E    TF SV+K CA    L    ++H+ ++K G+  +  I + L+  YSKCG ++
Sbjct: 477 RSGMEPDEYTFGSVLKACA-GDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMID 535

Query: 333 DASKIFSMM--------------------------REMKDVVSWTAMISGHLQNGAIDLA 366
           +A KI + +                          R  + +VSW A+ISG++     + A
Sbjct: 536 EAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDA 595

Query: 367 VNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNA 422
             FF +M   G+ P+ FTYS +L     ++      Q+HAH+IK   +    + + L++ 
Sbjct: 596 QRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDM 655

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G L ++  +FE    +D V W+AM+ GYA  G  E A+K++  +    + PN  TF
Sbjct: 656 YSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATF 715

Query: 483 SSVINACTAPSAAVEQG-KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
            S++ AC A    VE+G   FH    +  L+  L   S +V +  K G +E A E+ +  
Sbjct: 716 VSLLRAC-AHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEM 774

Query: 542 R-KRDLVSWNSMI 553
             + D V W +++
Sbjct: 775 PFEADDVIWRTLL 787



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 218/458 (47%), Gaps = 41/458 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q LFD S   N   YN ++  Y +      AL LF  + +  L     +LS  L+ C  +
Sbjct: 337 QRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATV 396

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H    KS F+R++ V+ + +D+Y +   +++  RVFD+M   + VSW +++
Sbjct: 397 KGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAII 456

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + + +N+   + L +   M   G++P+ +TF +VL   A + +    +++HT ++K G  
Sbjct: 457 AAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSL-NHGMEIHTTIVKLGMA 515

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFD-----------------------GMEDRDS--- 245
               + ++L+ MY K  M+ +A  + +                       G++DR     
Sbjct: 516 SNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEM 575

Query: 246 -ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++WN++++GYV  +   +A   FN M   G    + T+ +V+  CA    + L +Q+H+
Sbjct: 576 IVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHA 635

Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
            V+K  + +D  I + L+  YSKCG + D+  +F     ++D V+W AMI G+  +G  +
Sbjct: 636 HVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFE-KAPIRDFVTWNAMICGYAHHGMGE 694

Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQV---HAHIIKTNY--EKSFSVGTAL 419
            A+  F  M    + PN  T+  +L A   +   +    + H++K  Y  +      + +
Sbjct: 695 EAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNM 754

Query: 420 LNAYVKKGILDEAAKVFELID----EKDIVAWSAMLAG 453
           ++   K G   E  K  ELI     E D V W  +L+ 
Sbjct: 755 VDILGKSG---EVEKALELIQEMPFEADDVIWRTLLSA 789



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 115/249 (46%), Gaps = 14/249 (5%)

Query: 12  NPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR 71
           +P+T + PK ++            DR  Q   V +N ++  Y      ++A   F  +  
Sbjct: 557 HPETIEEPKGIQ------------DRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMME 604

Query: 72  LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED 131
           +G+     T S+VL TC  L     G+Q+H   +K     DV + ++LVD+Y +  N+ D
Sbjct: 605 MGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHD 664

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD 191
            R +F+     + V+W +++ GYA + M +  ++LF  M +  I PN  TF ++L   A 
Sbjct: 665 SRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAH 724

Query: 192 EGIVATAVQ-VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWN 249
            G+V   +   H M  + G +      + ++ +  KS  V  A  +   M  + D + W 
Sbjct: 725 MGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWR 784

Query: 250 SMVAGYVTN 258
           ++++    N
Sbjct: 785 TLLSACKIN 793


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 240/747 (32%), Positives = 399/747 (53%), Gaps = 63/747 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           SL    P  + V +N LL  YC+  + ++ + L + + R G+    +TL+ +LK CG L 
Sbjct: 118 SLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLD 177

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D   G Q+H   VK+G   DV   ++LVD+Y +  ++ED    F  M E N VSW ++++
Sbjct: 178 DLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIA 237

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           G  +N+   R LEL  R +       + T             ++TA Q+H   IKN    
Sbjct: 238 GCVQNEQYMRGLELLCRCK-------AIT------------CLSTARQLHAHAIKNKFSS 278

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  A++ +Y K+  + DAR  F G+ +    T N+M+ G V   L  EA + F  M 
Sbjct: 279 DRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMT 338

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
            +G      +   V   CA  K               G D D  +R  ++  Y KC  + 
Sbjct: 339 RSGIGFGVVSLSGVFSACAEVK---------------GFDVDVCVRNAILDLYGKCKALV 383

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           +A  +F  M E +D VSW  +I+   QN   +  +    +M R G+  + FTY  +L A 
Sbjct: 384 EAYLVFQEM-EQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKAC 442

Query: 393 PAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +   +    VH   IK+       V + +++ Y K G++ EA K+ + I  +++V+W+
Sbjct: 443 AGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWN 502

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +++AG++    +E A K + ++   GVKP+ FT+++V+++C A  A +E GKQ H   IK
Sbjct: 503 SIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSC-ANLATIELGKQIHGQIIK 561

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
            ++     +SS LV MY+K GN+  +  +F++ +K D VSWN+MICGYA HG   +ALE+
Sbjct: 562 QEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEM 621

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+  ++ ++  +  TF+ V+ AC+H GL+D+G +YF +M + + + P +EH++CM     
Sbjct: 622 FERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGP--- 678

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
                ++A+  I  MP  A A +W+T+L+ C++              + L P DS++Y+L
Sbjct: 679 -----QEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYIL 733

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA +G W + +R R+LM   ++KKE G SWIEV+++ + FL G+  HP+S ++Y  
Sbjct: 734 LSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVHPRSREVYEM 793

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDE 761
           L  L   +K +GY+P  S +  ++D+E
Sbjct: 794 LNNLICEMKLSGYEP-ASALFAEVDEE 819



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/566 (26%), Positives = 257/566 (45%), Gaps = 64/566 (11%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL------ 150
           G+  H   + SGF   + VS  L+ +Y R         VFD M   + VSW ++      
Sbjct: 50  GQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAH 109

Query: 151 -------------------------LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
                                    LSGY +  M   ++ L   M   G+ P+  T + +
Sbjct: 110 MGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVL 169

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L        +A  VQ+H + +K G E+     +AL+ MY K + + DA   F GM +R+S
Sbjct: 170 LKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNS 229

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           ++W +++AG V NE +M   E                   ++  C     L  ARQLH+ 
Sbjct: 230 VSWGAVIAGCVQNEQYMRGLE-------------------LLCRCKAITCLSTARQLHAH 270

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
            +KN    D  + T ++  Y+K   + DA + F  +     V +  AM+ G ++ G    
Sbjct: 271 AIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPN-HTVETCNAMMVGLVRTGLGAE 329

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
           A+  F  MTR G+     + S + +A   V  F V              V  A+L+ Y K
Sbjct: 330 AMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDV-----------DVCVRNAILDLYGK 378

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
              L EA  VF+ ++++D V+W+ ++A   Q    E  +    ++   G++ ++FT+ SV
Sbjct: 379 CKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSV 438

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           + AC A   ++E G   H  +IK+ L     VSS +V MY K G I  A ++  R   ++
Sbjct: 439 LKAC-AGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQE 497

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           LVSWNS+I G++ +  +++A + F EM    ++ D  T+  V+ +C +   ++ G+Q   
Sbjct: 498 LVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHG 557

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAG 631
            ++ +  +       S +VD+Y++ G
Sbjct: 558 QIIKQEMLGDEFIS-STLVDMYAKCG 582



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 219/519 (42%), Gaps = 77/519 (14%)

Query: 181 TFSTVLGVLADEG--IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
           TFS V  + A  G   +AT    H  ++ +G      V N L+ MY +      A  VFD
Sbjct: 31  TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90

Query: 239 GMEDRDSITWNSM-------------------------------VAGYVTNELHMEAFET 267
            M  RD+++WN+M                               ++GY    +  +    
Sbjct: 91  TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
              M   G    R+T   ++K C    +L L  Q+H+  +K G++ D    + L+  Y K
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGK 210

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           C  +EDA   F  M E ++ VSW A+I+G +QN      +   C+             + 
Sbjct: 211 CRSLEDALHFFHGMGE-RNSVSWGAVIAGCVQNEQYMRGLELLCRCK---------AITC 260

Query: 388 ILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
           + TA+      Q+HAH IK  +     VGTA+++ Y K   L +A + F  +    +   
Sbjct: 261 LSTAR------QLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETC 314

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +AM+ G  + G    A+++++ +T  G+     + S V                F AC+ 
Sbjct: 315 NAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGV----------------FSACAE 358

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
               +  +CV +A++ +Y K   +  A  VF+   +RD VSWN++I    Q+   +  + 
Sbjct: 359 VKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIV 418

Query: 568 VFKEMRRQDLEFDGITFIGVITACT-----HAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
              EM R  +E D  T+  V+ AC        GLV  G+     +  +  +  T      
Sbjct: 419 HLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST------ 472

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL 661
           +VD+Y + GM+ +A+ + +R+        W +++A   L
Sbjct: 473 VVDMYCKCGMITEALKLHDRIG-GQELVSWNSIIAGFSL 510


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/654 (35%), Positives = 374/654 (57%), Gaps = 55/654 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A +VFD +++ + + WN+M  G+  +   + A + +  M   G      TF  ++K CA 
Sbjct: 42  AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF--SMMREM------ 344
           +K  +  +Q+H  VLK G D D  + T L+  Y++ G++EDA K+F  S  R++      
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161

Query: 345 ----------------------KDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPN 381
                                 KDVVSW AMISG+++ G    A+  F +M     VRP+
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221

Query: 382 GFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
             T   +++A       +    VH+ I    +  +  +  AL++ Y K G ++ A ++F+
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            +  KD+++W+ ++ GY  +   + A+ +++++   G  PN+ T  S++ AC A   A++
Sbjct: 282 GLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC-AHLGAID 340

Query: 498 QGKQFHAC---SIKAKLNNALCVSSALVTMYSKKGNIESASEVF-KRQRKRDLVSWNSMI 553
            G+  H      +K  + N   + ++L+ MY+K G+I++A +VF      R L +WN+MI
Sbjct: 341 IGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMI 400

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            G+A HG    A ++F  MR   +E D ITF+G+++AC+H+G++D G+  F  M   + I
Sbjct: 401 SGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEI 460

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------------- 660
            P +EHY CM+DL   +G+ ++A ++IN MP      +W ++L AC+             
Sbjct: 461 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAK 520

Query: 661 -LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA-GYSWIEVKNKTYSF 718
            LI ++P +S  YVLLSN+YAA G W E A++R L+ND+ +KK+  G S IE+ +  + F
Sbjct: 521 KLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEF 580

Query: 719 LAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAF 778
           + GD  HPQ+ +IY  LEE+   L++AG+ PDTS VLQ++++E +E  L  HSE+LAIAF
Sbjct: 581 IIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAF 640

Query: 779 GLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLC 832
           GL++T  G  L I+KNLRVC +CH   KLISK+ +R+I+ RD  RF HF++G+C
Sbjct: 641 GLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 238/509 (46%), Gaps = 47/509 (9%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDMNESNVVSWTSLLSGY 154
           R +H + +K+G        + L++  + + + +       VFD + E N++ W ++  G+
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A +      L+L+  M   G+ P+S+TF  +L   A   I     Q+H  V+K G ++  
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT-----------NEL--- 260
            V  +LISMY ++  + DAR VFD    RD +++ +++AGYV+           +E+   
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184

Query: 261 -----------------HMEAFETFNN-MGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
                            + EA E F   M +       ST V+V+  CA +  + L R +
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           HS +  +G   +  I   L+  YSK G++E A ++F  +   KDV+SW  +I G+     
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWN-KDVISWNTLIGGYTHMNL 303

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI---IKTNYEKSFSV 415
              A+  F +M R G  PN  T   IL A   +        +H +I   +K       S+
Sbjct: 304 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSL 363

Query: 416 GTALLNAYVKKGILDEAAKVFE-LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
            T+L++ Y K G +D A +VF+  +  + +  W+AM++G+A  G    A  I+ ++   G
Sbjct: 364 QTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNG 423

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
           ++P++ TF  +++AC+  S  ++ G+  F + +   ++   L     ++ +    G  + 
Sbjct: 424 IEPDDITFVGLLSACSH-SGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKE 482

Query: 534 ASEVFKRQ-RKRDLVSWNSMICGYAQHGH 561
           A E+      + D V W S++     HG+
Sbjct: 483 AEEMINTMPMEPDGVIWCSLLKACKIHGN 511



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 213/470 (45%), Gaps = 41/470 (8%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+FD   + N + +N +   +   S    AL L+L +  LGL     T   +LK+C    
Sbjct: 44  SVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSK 103

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--------------- 137
               G+Q+H   +K GF  D+ V TSL+ +Y +   +ED R+VFD               
Sbjct: 104 IRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIA 163

Query: 138 ----------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHR-MQVEGIKPNSF 180
                           ++   +VVSW +++SGY         LELF   M +  ++P+  
Sbjct: 164 GYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDES 223

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           T  TV+   A    +     VH+ +  +G      + NALI +Y K   V  A  +FDG+
Sbjct: 224 TMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL 283

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            ++D I+WN+++ GY    L+ EA   F  M  +G      T +S++  CA    + + R
Sbjct: 284 WNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 343

Query: 301 QLHSQV---LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
            +H  +   LK  +    +++T L+  Y+KCG ++ A ++F      + + +W AMISG 
Sbjct: 344 WIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGF 403

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT---NYEKSFS 414
             +G  + A + F +M   G+ P+  T+  +L+A        +  +I ++    YE +  
Sbjct: 404 AMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPK 463

Query: 415 VG--TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
           +     +++     G+  EA ++   +  E D V W ++L      G+ E
Sbjct: 464 LEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLE 513



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 165/350 (47%), Gaps = 8/350 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPLFGSTLSSVL 85
           Y +  Q LFD  P ++ V +N ++  Y     ++EAL LF  +  +  +    ST+ +V+
Sbjct: 170 YIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVV 229

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
             C        GR VH      GFA ++ +  +L+DLY +   VE    +FD +   +V+
Sbjct: 230 SACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVI 289

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW +L+ GY    +    L LF  M   G  PN  T  ++L   A  G +     +H  +
Sbjct: 290 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 349

Query: 206 IKNGGEVVTSVCN---ALISMYLKSKMVRDARAVFD-GMEDRDSITWNSMVAGYVTNELH 261
            K    VVT+V +   +LI MY K   +  A+ VFD  M +R   TWN+M++G+  +   
Sbjct: 350 NKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRA 409

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-TG 320
             AF+ F+ M + G E    TFV ++  C+ +  L L R +   + + G +    +   G
Sbjct: 410 NAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTR-GYEITPKLEHYG 468

Query: 321 LMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
            M+      G  ++A ++ + M    D V W +++     +G ++L  +F
Sbjct: 469 CMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 518



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 145/294 (49%), Gaps = 38/294 (12%)

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDE---AAKVFELIDEKDIVAWSAMLAGYAQ 456
           +HA +IKT    +    + LL   V     D    A  VF+ I E +++ W+ M  G+A 
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
             D   A+K+Y  + S G+ P+ +TF  ++ +C A S   ++G+Q H   +K   +  + 
Sbjct: 67  SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSC-AKSKIRKEGQQIHGHVLKLGFDLDIY 125

Query: 517 VSSALVTMYSK-------------------------------KGNIESASEVFKRQRKRD 545
           V ++L++MY++                               +G IESA ++F     +D
Sbjct: 126 VHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKD 185

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYF 604
           +VSWN+MI GY + G+ K+ALE+FKEM    ++  D  T + V++AC  +  ++ G+   
Sbjct: 186 VVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVH 245

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
              +N+H     ++  + ++DLYS+ G +E A ++ + + +      W T++  
Sbjct: 246 S-WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL-WNKDVISWNTLIGG 297


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 221/611 (36%), Positives = 351/611 (57%), Gaps = 53/611 (8%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L R +F S++K  +         ++H    K G   D  I+TGL+  Y+ C ++ DA  +
Sbjct: 119 LDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLL 178

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M    D V+W  +I G+ QNG  D A+  F  M    ++P+      +L+A      
Sbjct: 179 FDKMCH-PDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237

Query: 398 FQ----VHAHIIKTNY-------------------------------EKSFSVGTALLNA 422
                 +H  +    Y                                K   V TA+L+ 
Sbjct: 238 LSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG 297

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y K G++ +A  +F+ + E+D+V WSAM++GYA+    + A+K++ ++  +   P++ T 
Sbjct: 298 YAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITM 357

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
            SVI+AC+    A+ Q    H    ++    AL V++AL+ MY+K GN+  A EVF+   
Sbjct: 358 LSVISACSH-VGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMP 416

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           +++++SW+SMI  +A HG+   A+++F+ M+  ++E +G+TFIGV+ AC HAGLV+EG++
Sbjct: 417 RKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEK 476

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--- 659
            F  M+NEH I PT EHY CMVDLY RA  L KA+++I  MPFA +  +W ++++AC   
Sbjct: 477 LFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVH 536

Query: 660 -----------RLISLQP-HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                      RL+ L+P HD A+ V+LSN+YA    W +   +RK M+ + + KE   S
Sbjct: 537 GEAELGEFAAKRLLELEPDHDGAL-VVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASS 595

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
            IE+ N+ + F+  D  H QS++IY KL+E+ ++LK  GYKP TS +L D+++E K+ ++
Sbjct: 596 RIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELV 655

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
             HSE+LA+ +GL++    + ++IVKNLR+C DCH+ +KL+SK+ + +IVVRD  RFHH 
Sbjct: 656 LWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHC 715

Query: 828 KEGLCSCGDYW 838
             G+CSC DYW
Sbjct: 716 SGGICSCRDYW 726



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 217/478 (45%), Gaps = 63/478 (13%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRL-GLPL----FGSTLSSVLKTC 88
           +F + P  +    N+LL    R S  ++ + L+  +R +    L    F S L +V K  
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
              F+H  G ++H    K GF  D  + T L+ +Y     + D R +FD M   + V+W 
Sbjct: 136 A--FNH--GLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWN 191

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
            ++ GY +N   D  L LF  M+   +KP+S    TVL      G ++    +H  V  N
Sbjct: 192 MIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDN 251

Query: 209 GGEVVTSVCNALISMY---------------LKSK----------------MVRDARAVF 237
           G  + + +  ALI+MY               L SK                MV+DAR +F
Sbjct: 252 GYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIF 311

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           D M +RD + W++M++GY  ++   EA + F+ M    +   + T +SVI  C+    L 
Sbjct: 312 DQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALA 371

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
            A  +H+ V ++G     ++   L+  Y+KCG +  A ++F  M   K+V+SW++MI+  
Sbjct: 372 QANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPR-KNVISWSSMINAF 430

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT 417
             +G  D A+  F +M    + PNG T+  +L A         HA +++   EK FS   
Sbjct: 431 AMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACG-------HAGLVEEG-EKLFSSMI 482

Query: 418 -------------ALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
                         +++ Y +   L +A ++ E +    +++ W ++++     G+ E
Sbjct: 483 NEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAE 540



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 32/365 (8%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD+    + V +N ++  YC++  + +AL LF  +R   +      L +VL  CG   +
Sbjct: 178 LFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYM----------------------------- 124
             +GR +H     +G+A D ++ T+L+++Y                              
Sbjct: 238 LSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG 297

Query: 125 --RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
             +   V+D R +FD M E ++V W++++SGYA +      L+LF  M  +   P+  T 
Sbjct: 298 YAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITM 357

Query: 183 STVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
            +V+   +  G +A A  +HT V ++G     SV NALI MY K   +  AR VF+ M  
Sbjct: 358 LSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPR 417

Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
           ++ I+W+SM+  +  +     A + F  M     E    TF+ V+  C     +    +L
Sbjct: 418 KNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKL 477

Query: 303 HSQVL-KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
            S ++ ++GI         ++  Y +   +  A ++   M    +V+ W +++S    +G
Sbjct: 478 FSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHG 537

Query: 362 AIDLA 366
             +L 
Sbjct: 538 EAELG 542



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 123/239 (51%), Gaps = 7/239 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKT 87
           K  + +FD+  +R+ V ++ ++  Y      QEAL LF   +++  +P    T+ SV+  
Sbjct: 305 KDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVP-DQITMLSVISA 363

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  +        +H    +SGF R ++V+ +L+D+Y +  N+   R VF++M   NV+SW
Sbjct: 364 CSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISW 423

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVI 206
           +S+++ +A +   D  ++LF RM+   I+PN  TF  VL      G+V    ++  +M+ 
Sbjct: 424 SSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMIN 483

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEA 264
           ++G          ++ +Y ++  +R A  + + M    + I W S+++     ++H EA
Sbjct: 484 EHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSAC---QVHGEA 539


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/742 (33%), Positives = 403/742 (54%), Gaps = 29/742 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKTCGC 90
           Q  F   P      ++  +   C+ +LH+EAL  F   ++    PL   T + ++  C  
Sbjct: 51  QLAFSPCPLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSS 110

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L     GR++H   +   +  D+ +   ++ +Y +  ++++ R +FD M   NVVSWTS+
Sbjct: 111 LRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSM 170

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN-- 208
           +SGY+R    D  + L+ +M   G  P+ FTF +++   +       A Q+H  V+K+  
Sbjct: 171 ISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEF 230

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +++    NALISMY K   + DA  VF  +  +D I+W SM+AG+      +EA   F
Sbjct: 231 GADLIAQ--NALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHF 288

Query: 269 NNMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
             M L+ +    + FV  S    C+   E    RQ+H   +K G+  D      L   Y+
Sbjct: 289 REM-LSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYA 347

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KCG +E A  +F  + E  D+V+W A+I+G         + +FF QM   G+ PN  T  
Sbjct: 348 KCGFLESARTVFYHI-EKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVL 406

Query: 387 IILTA--QPAV--SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L A  +P +     QVH++I+K  +     V  +LL+ Y K   L++A +VFE I  K
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466

Query: 443 -DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
            DIV+W+ +L    Q       +++ + + +  +KP+  T ++V+ + +   A+ E G Q
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVS-SGQIASYEVGSQ 525

Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
            H   +K+ LN  + VS+AL+ MY+K G++E A ++F      D++SW+S+I GYAQ G 
Sbjct: 526 IHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGC 585

Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
            K+A E+F+ MR   ++ + ITF+G++TAC+H G+V+EG + +  M  ++ I PT EH S
Sbjct: 586 GKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCS 645

Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPH 667
           CMVDL +RAG L+ A D I +MPF     VW+T+LAAC+              ++ + P 
Sbjct: 646 CMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPS 705

Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
           +SA  V+L N++A++GHW++ AR+R  M    V K  G SWIE+K+K + FLA D  HP+
Sbjct: 706 NSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPE 765

Query: 728 SNQIYSKLEELSTRLKDAGYKP 749
             +IY+ LEEL  ++ D    P
Sbjct: 766 RGKIYTMLEELMLQILDDSCDP 787



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 274/571 (47%), Gaps = 14/571 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K+ +++FD  P +N V +  ++  Y R      A+ L++ + R G      T  S++K+C
Sbjct: 150 KEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSC 209

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
             L D    RQ+H   +KS F  D+    +L+ +Y + + + D   VF  +   +++SW 
Sbjct: 210 SGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWG 269

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           S+++G+++       L  F  M  + + +PN F F +     +         Q+H + IK
Sbjct: 270 SMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIK 329

Query: 208 NG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            G G  + + C +L  MY K   +  AR VF  +E  D + WN+++AG+ +     E+  
Sbjct: 330 FGLGSDLFAGC-SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSS 388

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F+ M   G      T +S++  C+    L    Q+HS ++K G + D  +   L+  YS
Sbjct: 389 FFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYS 448

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC  + DA ++F  +    D+VSW  +++  LQ       +     M    ++P+  T +
Sbjct: 449 KCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLT 508

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            +L +   ++ +    Q+H  I+K+      SV  AL+N Y K G L+ A K+F+ I   
Sbjct: 509 NVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNP 568

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           DI++WS+++ GYAQ G  + A +++R +   GVKPNE TF  ++ AC+      E  K +
Sbjct: 569 DIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLY 628

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK--RDLVSWNSMICGYAQHG 560
                  +++      S +V + ++ G ++ A E F RQ     D+V W +++     HG
Sbjct: 629 RTMQEDYRISPTKEHCSCMVDLLARAGCLDVA-EDFIRQMPFVPDVVVWKTLLAACKVHG 687

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
           +    LEV K      L+ D      V+  C
Sbjct: 688 N----LEVGKRAAENVLKIDPSNSAAVVMLC 714


>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
 gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
          Length = 620

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/622 (36%), Positives = 348/622 (55%), Gaps = 56/622 (9%)

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G    +  FV  +  CA + EL   RQ+HS V+ +G+  +  I   L+  Y KC  
Sbjct: 1   MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR--------------- 375
           +  A K+F  M  ++DVVSWTAM++ + QNG    A++ F  M R               
Sbjct: 61  VPCAEKVFDGML-LRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVG 119

Query: 376 ----------------EGVRPNGFTYSIILTAQPAVSPFQVHAHI-----IKTNYEKSFS 414
                           EG+R N FT   +L A   +   ++   I            S +
Sbjct: 120 NSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTA 179

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG--AVKIYRQLTS 472
           VG +++N Y + G L +  K F+ ++EK +VAWS MLA YAQ  D  G  A K ++++ +
Sbjct: 180 VGNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEA 239

Query: 473 EGVKPNEFTFSSVINACTAPSAAVEQGKQFHA-CSIKAKLNNALCVSSALVTMYSKKGNI 531
           EG+KP E TF S ++AC A  A +E G+  H   +    +  +L + + ++ MY K G+ 
Sbjct: 240 EGIKPGEVTFVSALDACAA-MATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSP 298

Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
             A  VF +  ++ L+SWNS+I  YA +GH  +AL   +EM  Q  + D  T + ++   
Sbjct: 299 SDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGL 358

Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
           +HAGL++ G ++F   + +H + P+     C+VDL +R G L+ A ++I   P   + T+
Sbjct: 359 SHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTI 418

Query: 652 -WRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
            W T+LAAC              R+  L+P  S  +V+L+N+YA+ G W + +R+RK+M 
Sbjct: 419 AWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMME 478

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
              VKKE G SWIE+    + F++G+  HP+  +I  +LE+L+ R+++AGY PDT+ V+ 
Sbjct: 479 RMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVVH 538

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D+++  KE ILS+HSERLAI FGL++T  G  +++VKNLRVC DCH   K+IS +  R+I
Sbjct: 539 DVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGREI 598

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           VVRD++RFHHFK G CSCGD+W
Sbjct: 599 VVRDSSRFHHFKHGQCSCGDFW 620



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 213/442 (48%), Gaps = 50/442 (11%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           MQ EG +P+   F   L   A  G +    Q+H+ V+ +G      + N+L++MY K + 
Sbjct: 1   MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTN-----ELHM---------------------- 262
           V  A  VFDGM  RD ++W +M+A Y  N      LH+                      
Sbjct: 61  VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGN 120

Query: 263 ----EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-I 317
               +A E F+ M L G      T +S+++ C   ++L+LARQ+H++    G   +   +
Sbjct: 121 SKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAV 180

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ--NGAIDLAVNFFCQMTR 375
              ++  Y++CG + D  K F  + E K +V+W+ M++ + Q  +G+   A  FF +M  
Sbjct: 181 GNSVVNMYARCGSLLDTKKAFDSLEE-KGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEA 239

Query: 376 EGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY-EKSFSVGTALLNAYVKKGILD 430
           EG++P   T+   L A  A++  +    +H     + + E S  +G  ++N Y K G   
Sbjct: 240 EGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPS 299

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           +A  VF+ + EK +++W++++  YA  G    A+   +++  +G  P+  T  S++    
Sbjct: 300 DAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYG-L 358

Query: 491 APSAAVEQGKQFHACSIKAKLNNALCVSSA----LVTMYSKKGNIESASEVFKRQR--KR 544
           + +  +E+G +    SI+   ++ L  SS     LV + ++KG +++A E+       + 
Sbjct: 359 SHAGLLERGVEHFRSSIQ---DHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQA 415

Query: 545 DLVSWNSMICGYAQHGHTKKAL 566
           D ++W +++     +G  ++ +
Sbjct: 416 DTIAWMTLLAACKSYGDPQRGI 437



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 188/424 (44%), Gaps = 61/424 (14%)

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            DH  GRQ+H   V SG   ++ +S SLV++Y +  +V    +VFD M   +VVSWT++L
Sbjct: 26  LDH--GRQIHSSVVDSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAML 83

Query: 152 SGYARN--------------------------------KMNDRVLELFHRMQVEGIKPNS 179
           + YA+N                                K  D  LELFH M++EG++ N 
Sbjct: 84  AVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGNSKFQD-ALELFHGMELEGLRSNE 142

Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV-VTSVCNALISMYLKSKMVRDARAVFD 238
           FT  ++L        +  A Q+H      G     T+V N++++MY +   + D +  FD
Sbjct: 143 FTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFD 202

Query: 239 GMEDRDSITWNSMVAGYVTNE--LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
            +E++  + W+ M+A Y  ++      AF+ F  M   G +    TFVS +  CA    L
Sbjct: 203 SLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATL 262

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVA------YSKCGKMEDASKIFSMMREMKDVVSW 350
              R +H +   +G      + T L++       Y KCG   DA  +F  M E K ++SW
Sbjct: 263 EHGRSMHRRAAASGF-----VETSLVLGNTIINMYGKCGSPSDAKLVFDQMPE-KCLISW 316

Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAH 403
            ++I  +  NG    A++   +M  +G  P+  T   IL         +  V  F+  + 
Sbjct: 317 NSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFR--SS 374

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF--ELIDEKDIVAWSAMLAGYAQIGDTE 461
           I     E S      L++   +KG LD A ++       + D +AW  +LA     GD +
Sbjct: 375 IQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQ 434

Query: 462 GAVK 465
             ++
Sbjct: 435 RGIR 438



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 4/258 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P+++ V +N ++     +S  Q+AL LF G+   GL     TL S+L+ CG L D
Sbjct: 98  VFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLED 157

Query: 94  HVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               RQ+H      GF  +   V  S+V++Y R  ++ D ++ FD + E  +V+W+ +L+
Sbjct: 158 LKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLA 217

Query: 153 GYARNK--MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG- 209
            YA++K     R  + F  M+ EGIKP   TF + L   A    +     +H     +G 
Sbjct: 218 AYAQSKDGSGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGF 277

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E    + N +I+MY K     DA+ VFD M ++  I+WNS++  Y  N   +EA  +  
Sbjct: 278 VETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQ 337

Query: 270 NMGLAGAELTRSTFVSVI 287
            M L G +    T VS++
Sbjct: 338 EMLLQGFDPDSGTSVSIL 355


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 211/557 (37%), Positives = 327/557 (58%), Gaps = 20/557 (3%)

Query: 300  RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
            ++ H+++   G+ +D  I T   + Y    +++ AS +F  +      + W  MI G   
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFL-WNVMIRGFAT 795

Query: 360  NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSV 415
            +G    ++  + +M  +G++P+ F +   L +   +S  Q    +H H++         V
Sbjct: 796  DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855

Query: 416  GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
              AL++ Y K G ++ A  VF+ +  +D+V+W++M++GYA  G     +  +  + S GV
Sbjct: 856  DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915

Query: 476  KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
             PN  +  SV+ AC     A+ +G+ FH+  I+      + V++A++ MYSK G+++ A 
Sbjct: 916  IPNRVSILSVLLAC-GNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 974

Query: 536  EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
             +F     +DLV W++MI  Y  HGH +KA+++F +M +  +    +TF  V++AC+H+G
Sbjct: 975  CLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 1034

Query: 596  LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
            L++EG+ YF +M  E  I   + +Y+CMVDL  RAG L +A+D+I  MP    A++W ++
Sbjct: 1035 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094

Query: 656  LAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
            L ACR              L  L P  +  +VLLSN+YAA   W E  +VRK+M  R   
Sbjct: 1095 LGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGAN 1154

Query: 702  KEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE 761
            K  G+S +E  N+ + F  GD SHPQ  ++Y+KLEEL+  +K  GY P T +VL DI++E
Sbjct: 1155 KIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEEE 1214

Query: 762  HKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
             KEA LS HSERLAIAFGL+ T  G  L+I KNLR+CGDCH  IKLISK+  R I+VRD 
Sbjct: 1215 AKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVILVRDM 1274

Query: 822  NRFHHFKEGLCSCGDYW 838
            +RFH F++G+CSCGDYW
Sbjct: 1275 HRFHRFEDGVCSCGDYW 1291



 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/683 (33%), Positives = 360/683 (52%), Gaps = 28/683 (4%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H +  K+G   D   +T L  LY +  +++  R+VFD+    NV  W S L  Y R K
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 159 MNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN---GGEVVT 214
             +  L LFH M    G  P++FT    L   A   ++     +H    KN   G ++  
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF- 140

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V +AL+ +Y K   + +A  VF+  +  D++ W SMV GY  N    EA   F+ M + 
Sbjct: 141 -VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMM 199

Query: 275 G-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
               L   T VSV+  CA    ++    +H  V++   D D  +   L+  Y+K G  + 
Sbjct: 200 DCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKI 259

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A+ +FS M E KDV+SW+ MI+ +  N A + A+N F +M  +   PN  T    L A  
Sbjct: 260 AANLFSKMPE-KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA 318

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
                +    +H   +   +E  FSV TAL++ Y+K    DEA  +F+ + +KD+V+W A
Sbjct: 319 VSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVA 378

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           +L+GYAQ G    ++ ++R + S+G++P+      ++ A ++     +Q    H   +++
Sbjct: 379 LLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKIL-AASSELGIFQQALCLHGYVVRS 437

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
             N+ + V ++L+ +YSK G++  A ++FK    RD+V W+SMI  Y  HG   +ALE+F
Sbjct: 438 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIF 497

Query: 570 KEM-RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
            +M +   +  + +TF+ +++AC+HAGLV+EG + FD MV+++ + P  EH+  MVDL  
Sbjct: 498 DQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLG 557

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           R G L KAMDIINRMP  A   VW  +L ACR              L  L P  +  Y+L
Sbjct: 558 RIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYIL 617

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           LSN+YA  G W   A +R  + +R +KK  G S +EV+   +SFLA D  HP S +IY  
Sbjct: 618 LSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYEL 677

Query: 735 LEELSTRLKDAGYKPDTSYVLQD 757
           L +L  ++    Y PD  ++L D
Sbjct: 678 LRKLEAQMGKEVYIPDLDFLLHD 700



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 250/482 (51%), Gaps = 22/482 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGC 90
           + +FD +P  N   +N  L  YCR+   +E L LF L I   G      T+   LK C  
Sbjct: 56  RKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAG 115

Query: 91  LFDHVFGRQVHCECVKSGFAR-------DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           L     G+ +H      GFA+       D+ V ++LV+LY +   + +  +VF++    +
Sbjct: 116 LRMLELGKVIH------GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPD 169

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
            V WTS+++GY +N   +  L LF +M  ++ +  +  T  +V+   A    V     VH
Sbjct: 170 TVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVH 229

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
            +VI+   +    + N+L+++Y K+   + A  +F  M ++D I+W++M+A Y  NE   
Sbjct: 230 GLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAAN 289

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EA   F+ M     E    T VS ++ CA ++ L   +++H   +  G + D ++ T L+
Sbjct: 290 EALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALI 349

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KC   ++A  +F  + + KDVVSW A++SG+ QNG    ++  F  M  +G++P+ 
Sbjct: 350 DMYMKCSCPDEAVDLFQRLPK-KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDA 408

Query: 383 FTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
                IL A   +  FQ    +H +++++ +  +  VG +L+  Y K G L +A K+F+ 
Sbjct: 409 VAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKG 468

Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVE 497
           +  +D+V WS+M+A Y   G    A++I+ Q+     V+PN  TF S+++AC+  +  VE
Sbjct: 469 MIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSH-AGLVE 527

Query: 498 QG 499
           +G
Sbjct: 528 EG 529



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 223/451 (49%), Gaps = 34/451 (7%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS- 79
            YSK  Q      +F+   + + V +  ++  Y +++  +EAL LF  +  +   +    
Sbjct: 148 LYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPV 207

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL SV+  C  L +   G  VH   ++  F  D+ +  SL++LY +T   +    +F  M
Sbjct: 208 TLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKM 267

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E +V+SW+++++ YA N+  +  L LFH M  +  +PNS T  + L   A    +    
Sbjct: 268 PEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGK 327

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           ++H + +  G E+  SV  ALI MY+K     +A  +F  +  +D ++W ++++GY  N 
Sbjct: 328 KIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNG 387

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ---LHSQVLKNGIDFDHN 316
           +  ++   F NM   G    +   V+V+K+ A + EL + +Q   LH  V+++G + +  
Sbjct: 388 MAYKSMGVFRNMLSDG---IQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVF 444

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           +   L+  YSKCG + DA K+F  M  ++DVV W++MI+ +  +G    A+  F QM + 
Sbjct: 445 VGASLIELYSKCGSLGDAVKLFKGMI-VRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKN 503

Query: 377 G-VRPNGFTYSIILTA-------QPAVSPFQ--VHAHIIKTNYEKSFSVGTALLNAYVKK 426
             VRPN  T+  IL+A       +  +  F   VH + ++ + E  F +   LL      
Sbjct: 504 STVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEH-FGIMVDLL------ 556

Query: 427 GILDEAAKVFELIDEKDIVA----WSAMLAG 453
           G + +  K  ++I+   I A    W A+L  
Sbjct: 557 GRIGQLGKAMDIINRMPIPAGPHVWGALLGA 587



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 179/397 (45%), Gaps = 40/397 (10%)

Query: 98   RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
            ++ H +    G   D  + T    +Y+  N ++    VF+D+       W  ++ G+A +
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 158  KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
                  LEL+ +M  +G+KP+ F F   L   A    +     +H  ++  G      V 
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 218  NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
             AL+ MY K   +  AR VFD M  RD ++W SM++GY  N  + E    F+ M  +G  
Sbjct: 857  AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916

Query: 278  LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
              R + +SV+  C     LR     HS V++ G +FD  + T +M  YSKCG ++ A  +
Sbjct: 917  PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976

Query: 338  FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
            F      KD+V W+AMI+ +  +G    A++ F QM + GVRP+  T+            
Sbjct: 977  FDETAG-KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTF------------ 1023

Query: 398  FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA-----WSAMLA 452
                               T +L+A    G+L+E    F+L+ E+ ++A     ++ M+ 
Sbjct: 1024 -------------------TCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVD 1064

Query: 453  GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
               + G    AV +   +    V+P+   + S++ AC
Sbjct: 1065 LLGRAGQLSEAVDLIENMP---VEPDASIWGSLLGAC 1098



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 182/373 (48%), Gaps = 13/373 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           +R   V + + C   + +    QLHSQV K GI  D    T L   Y+KC  ++ A K+F
Sbjct: 3   SRQVLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT-REGVRPNGFTYSIILTAQPAVSP 397
                  +V  W + +  + +    +  +  F  M    G  P+ FT  I L A   +  
Sbjct: 60  DETPH-PNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRM 118

Query: 398 FQVHAHI---IKTNYE--KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            ++   I    K N E      VG+AL+  Y K G + EA KVFE     D V W++M+ 
Sbjct: 119 LELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVT 178

Query: 453 GYAQIGDTEGAVKIYRQLT-SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           GY Q  D E A+ ++ Q+   + V  +  T  SV++AC A    V+ G   H   I+ + 
Sbjct: 179 GYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSAC-AQLLNVKAGSCVHGLVIRREF 237

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +  L + ++L+ +Y+K G  + A+ +F +  ++D++SW++MI  YA +    +AL +F E
Sbjct: 238 DGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHE 297

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M  +  E + +T +  + AC  +  ++EG++   I V +          + ++D+Y +  
Sbjct: 298 MIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWK-GFELDFSVSTALIDMYMKCS 356

Query: 632 MLEKAMDIINRMP 644
             ++A+D+  R+P
Sbjct: 357 CPDEAVDLFQRLP 369



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 153/345 (44%), Gaps = 23/345 (6%)

Query: 34   LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
            +F+  P      +N ++  +  D     +L L+  +   GL          LK+C  L D
Sbjct: 774  VFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSD 833

Query: 94   HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
               G+ +H   V  G + D+ V  +LVD+Y +  ++E  R VFD M   ++VSWTS++SG
Sbjct: 834  LQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISG 893

Query: 154  YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
            YA N  N   L  F  M+  G+ PN  +  +VL    + G +      H+ VI+ G E  
Sbjct: 894  YAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFD 953

Query: 214  TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
              V  A++ MY K   +  AR +FD    +D + W++M+A Y  +    +A + F+ M  
Sbjct: 954  ILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVK 1013

Query: 274  AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA--------- 324
            AG   +  TF  V+  C+           HS +L+ G  +   +    ++A         
Sbjct: 1014 AGVRPSHVTFTCVLSACS-----------HSGLLEEGKMYFQLMTEEFVIARKLSNYACM 1062

Query: 325  ---YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
                 + G++ +A  +   M    D   W +++     +  +DLA
Sbjct: 1063 VDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLA 1107


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/568 (39%), Positives = 333/568 (58%), Gaps = 32/568 (5%)

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF-----SMMREMKDVVSWTAMIS 355
           Q+HS +LK G+  +  + T      S    +  AS +      +      D   +  +I 
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 356 GHLQNG-AIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYE 410
              Q   +   A+ F+  M R  V PN FT+  +L A   +   +    VHA ++K  +E
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259

Query: 411 KSFSVGTALLNAYV------KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +   V   L++ Y         G +  A KVF+    KD V WSAM+ GYA+ G++  AV
Sbjct: 260 EDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDESPVKDSVTWSAMIGGYARAGNSARAV 318

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++R++   GV P+E T  SV++AC A   A+E GK   +   +  +  ++ + +AL+ M
Sbjct: 319 TLFREMQVTGVCPDEITMVSVLSAC-ADLGALELGKWLESYIERKNIMRSVELCNALIDM 377

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           ++K G+++ A +VF+  + R +VSW SMI G A HG   +A+ VF EM  Q ++ D + F
Sbjct: 378 FAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAF 437

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           IGV++AC+H+GLVD+G  YF+ M N   I P +EHY CMVD+ SRAG + +A++ +  MP
Sbjct: 438 IGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMP 497

Query: 645 FAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERAR 690
              +  +WR+++ AC               LI  +P   + YVLLSN+YA    W+++ +
Sbjct: 498 VEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTK 557

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           VR++M+ + ++K  G + IE+ N+ Y F+AGD SH Q  +IY  +EE+   +K AGY P 
Sbjct: 558 VREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPT 617

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
           TS VL DID+E KE  L +HSE+LAIAF L++TP G P++IVKNLRVC DCH+  K ISK
Sbjct: 618 TSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISK 677

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +  R+IVVRD NRFHHFK GLCSCGD+W
Sbjct: 678 VYNREIVVRDRNRFHHFKNGLCSCGDFW 705



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 182/399 (45%), Gaps = 28/399 (7%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF------DGMEDRDSITWNSMVA 253
           Q+H++++K G      V     +       V  A +V             D+  +N+++ 
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 254 GYV-TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            +  T      A   +N M        + TF  V+K CA    L L   +H+ ++K G +
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259

Query: 313 FDHNIRTGLMVAYSKCGK-----MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
            D ++R  L+  Y  C +        A K+F     +KD V+W+AMI G+ + G    AV
Sbjct: 260 EDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFD-ESPVKDSVTWSAMIGGYARAGNSARAV 318

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAY 423
             F +M   GV P+  T   +L+A   +   +    + ++I + N  +S  +  AL++ +
Sbjct: 319 TLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMF 378

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K G +D A KVF  +  + IV+W++M+ G A  G    AV ++ ++  +GV P++  F 
Sbjct: 379 AKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFI 438

Query: 484 SVINACTAPSAAVEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
            V++AC+  S  V++G  +     +  SI  K+ +  C    +V M S+ G +  A E  
Sbjct: 439 GVLSACSH-SGLVDKGHYYFNTMENMFSIVPKIEHYGC----MVDMLSRAGRVNEALEFV 493

Query: 539 KRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           +    + + V W S++      G  K    V KE+ R++
Sbjct: 494 RAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRRE 532



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 172/417 (41%), Gaps = 51/417 (12%)

Query: 39  PQRNFVEYNRLLFEYCRDSLHQ-EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFG 97
           P  +   +N L+  + + +  +  AL  +  +RR  +     T   VLK C  +     G
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYM-----RTNNVEDGRRVFDDMNESNVVSWTSLLS 152
             VH   VK GF  D +V  +LV +Y       ++     ++VFD+    + V+W++++ 
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIG 306

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GYAR   + R + LF  MQV G+ P+  T  +VL   AD G +     + + + +     
Sbjct: 307 GYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMR 366

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              +CNALI M+ K   V  A  VF  M+ R  ++W SM+ G   +   +EA   F+ M 
Sbjct: 367 SVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEM- 425

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
                                             ++ G+D D     G++ A S  G ++
Sbjct: 426 ----------------------------------MEQGVDPDDVAFIGVLSACSHSGLVD 451

Query: 333 DASKIFSMMREMKDVVS----WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
                F+ M  M  +V     +  M+    + G ++ A+ F   M    V PN   +  I
Sbjct: 452 KGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMP---VEPNQVIWRSI 508

Query: 389 LTAQPAVSPFQVHAHIIK--TNYEKSFSVGTALL-NAYVKKGILDEAAKVFELIDEK 442
           +TA  A    ++   + K     E S      LL N Y K    ++  KV E++D K
Sbjct: 509 VTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVK 565



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 7/233 (3%)

Query: 25  PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           P  +KK   +FD SP ++ V ++ ++  Y R      A+ LF  ++  G+     T+ SV
Sbjct: 283 PVSAKK---VFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSV 339

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L  C  L     G+ +     +    R V +  +L+D++ +  +V+   +VF +M    +
Sbjct: 340 LSACADLGALELGKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTI 399

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           VSWTS++ G A +      + +F  M  +G+ P+   F  VL   +  G+V      +  
Sbjct: 400 VSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKG-HYYFN 458

Query: 205 VIKNGGEVVTSV--CNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
            ++N   +V  +     ++ M  ++  V +A      M  + + + W S+V  
Sbjct: 459 TMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTA 511


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/657 (34%), Positives = 368/657 (56%), Gaps = 21/657 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QV+  +I +G      +    I+  L    V  A   F  + + D + WN+++ GY    
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           +       + +M ++       TF+ V+K C  T    + +Q+H Q  K G   +  ++ 
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+K G++  A  +F  + + + VVSWT++ISG++QNG    A+N F +M +  V+
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHD-RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 198

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+      ++TA   V        +H  + K   E    +  +L   Y K+G+++ A   
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 258

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  +++ +++ W+AM++GYA  G  E A+K++R++ ++ ++ +  T  S + A +A   +
Sbjct: 259 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLA-SAQVGS 317

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +E  +       K++  +   V++ L+ MY+K G+I  A  VF R   +D+V W+ MI G
Sbjct: 318 LELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMG 377

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HGH ++A+ ++ EM++  +  +  TFIG++TAC ++GLV EG + F +M  +H I P
Sbjct: 378 YGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEP 436

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
             +HYSC+VDL  RAG L +A D I  MP     +VW  +L+AC+              L
Sbjct: 437 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQL 496

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L P+++  YV LSN+YA+   W   A VR +M  + + K+ G+S IE+     +F  G
Sbjct: 497 FILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVG 556

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP+S +I+ +L+ L  RLK AGY P    VL D++ E  E  L  HSERLA+A+G++
Sbjct: 557 DRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGII 616

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +T  G  L+I KNLR C +CH+ IKLISKL  R+I++RD  RFHHFK+G+CSCGD+W
Sbjct: 617 STAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 199/409 (48%), Gaps = 5/409 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           QV+ + + SG  +   +    ++  +   +V    + F +++E +++ W +++ GY +  
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           + D  + ++  MQ+  + PN FTF  VL       +     Q+H    K G      V N
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 139

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +L+SMY K   +  AR VFD + DR  ++W S+++GYV N   MEA   F  M     + 
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 199

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
                VSV+      ++L   + +H  V K G++F+ +I   L   Y+K G +E A   F
Sbjct: 200 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 259

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           + M E  +++ W AMISG+  NG  + A+  F +M  + +R +  T    + A   V   
Sbjct: 260 NRM-EKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 318

Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           +    +  +I K+ Y     V T L++ Y K G +  A  VF+ + +KD+V WS M+ GY
Sbjct: 319 ELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGY 378

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
              G  + A+ +Y ++   GV PN+ TF  ++ AC       E  + FH
Sbjct: 379 GLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 427



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 155/312 (49%), Gaps = 1/312 (0%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   VLK CG       G+Q+H +  K GF  +V V  SLV +Y +   +   R VFD +
Sbjct: 102 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 161

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           ++  VVSWTS++SGY +N      L +F  M+   +KP+     +V+    +   +    
Sbjct: 162 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 221

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +H +V K G E    +  +L +MY K  +V  AR  F+ ME  + I WN+M++GY  N 
Sbjct: 222 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 281

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA + F  M      +   T  S +   A    L LAR L   + K+    D  + T
Sbjct: 282 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNT 341

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           GL+  Y+KCG +  A  +F  + + KDVV W+ MI G+  +G    A+  + +M + GV 
Sbjct: 342 GLIDMYAKCGSIYLARCVFDRVAD-KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 400

Query: 380 PNGFTYSIILTA 391
           PN  T+  +LTA
Sbjct: 401 PNDGTFIGLLTA 412



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 146/322 (45%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+   R  V +  ++  Y ++    EALN+F  +R+  +      L SV+     + D
Sbjct: 157 VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVED 216

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ +H    K G   + ++  SL  +Y +   VE  R  F+ M + N++ W +++SG
Sbjct: 217 LGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISG 276

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA N   +  ++LF  M  + I+ +S T  + +   A  G +  A  +   + K+     
Sbjct: 277 YANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDD 336

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T V   LI MY K   +  AR VFD + D+D + W+ M+ GY  +    EA   +N M  
Sbjct: 337 TFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQ 396

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG      TF+ ++  C  +  ++   +L   +  +GI+  H   + ++    + G +  
Sbjct: 397 AGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQ 456

Query: 334 ASKIFSMMREMKDVVSWTAMIS 355
           A      M     V  W A++S
Sbjct: 457 AYDFIMSMPIKPGVSVWGALLS 478


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/672 (34%), Positives = 370/672 (55%), Gaps = 55/672 (8%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI + L       AR +FD +   D  T +++++   T+ L  EA + ++++   G +  
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
              F++  K CA + +    +++H    + G+  D  +   L+ AY KC  +E A ++F 
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF- 398
            +  ++DVVSWT++ S +++ G     ++ F +M   GV+PN  T S IL A   +    
Sbjct: 138 DL-VVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196

Query: 399 ---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY- 454
              ++H   ++     +  V +AL++ Y K   + EA  VF+L+  +D+V+W+ +L  Y 
Sbjct: 197 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256

Query: 455 ----------------------------------AQIGDTEGAVKIYRQLTSEGVKPNEF 480
                                              + G +E AV+++R++   G KPNE 
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
           T SS++ AC+  S  +  GK+ H    +      L  ++AL+ MY+K G++  +  VF  
Sbjct: 317 TISSILPACSF-SENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDM 375

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
            R++D+V+WN+MI   A HG+ K+AL +F +M    ++ + +TF GV++ C+H+ LV+EG
Sbjct: 376 MRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEG 435

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            Q F+ M  +H + P   HYSC+VD+YSRAG L +A   I  MP   +A+ W  +LAACR
Sbjct: 436 VQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACR 495

Query: 661 --------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
                         L  ++P++   YV L N+      W E ++VR LM +R + K  G 
Sbjct: 496 VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGC 555

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           SW++V NK ++F+ GD S+ +S++IY+ L+EL  ++K AGYKPDT YVLQDID E K   
Sbjct: 556 SWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAES 615

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           L  HSE+LA+AFG++     + +++ KNLR+CGDCH  IK +SK+    IVVRD+ RFHH
Sbjct: 616 LCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHH 675

Query: 827 FKEGLCSCGDYW 838
           FK G CSC D W
Sbjct: 676 FKNGNCSCKDLW 687



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 218/472 (46%), Gaps = 56/472 (11%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + + LFD  PQ +    + L+       L  EA+ ++  ++  G+        +  K C 
Sbjct: 30  RARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACA 89

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
              D +  ++VH +  + G   DV V  +L+  Y +   VE  RRVFDD+   +VVSWTS
Sbjct: 90  VSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTS 149

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L S Y +     + +++F  M   G+KPN  T S++L   A+   + +  ++H   +++G
Sbjct: 150 LSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHG 209

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE---------L 260
             V   VC+AL+S+Y K   VR+AR VFD M  RD ++WN ++  Y  N+         L
Sbjct: 210 MVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFL 269

Query: 261 HM--------------------------EAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            M                          EA E F  M   G +    T  S++  C+ ++
Sbjct: 270 KMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSE 329

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            LR+ +++H  V ++    D    T L+  Y+KCG +  +  +F MMR  KDVV+W  MI
Sbjct: 330 NLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRR-KDVVAWNTMI 388

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
             +  +G    A+  F +M    V+PN  T++ +L+          H+ +++   +   S
Sbjct: 389 IANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS-------HSRLVEEGVQIFNS 441

Query: 415 VG------------TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAG 453
           +G            + +++ Y + G L+EA K  + +  E    AW A+LA 
Sbjct: 442 MGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 217/460 (47%), Gaps = 50/460 (10%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+ + +   +    R++FD++ + +  + ++L+S    + +++  ++++  +Q  GIKP+
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
              F       A  G      +VH    + G      V NALI  Y K K V  AR VFD
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            +  RD ++W S+ + YV      +  + F  MG +G +    T  S++  CA  K+L+ 
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS--------- 349
            +++H   +++G+  +  + + L+  Y+KC  + +A  +F +M   +DVVS         
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPH-RDVVSWNGVLTAYF 256

Query: 350 --------------------------WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
                                     W A+I G ++NG  + AV  F +M + G +PN  
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T S IL A           ++H ++ +       +  TALL  Y K G L+ +  VF+++
Sbjct: 317 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 376

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             KD+VAW+ M+   A  G+ + A+ ++ ++    V+PN  TF+ V++ C+  S  VE+G
Sbjct: 377 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSH-SRLVEEG 435

Query: 500 KQ-FHACS----IKAKLNNALCVSSALVTMYSKKGNIESA 534
            Q F++      ++   N+  CV    V +YS+ G +  A
Sbjct: 436 VQIFNSMGRDHLVEPDANHYSCV----VDIYSRAGRLNEA 471



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 3/244 (1%)

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           +G  L+   +  G  + A ++F+ I + D    S +++     G +  A+KIY  L   G
Sbjct: 14  LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
           +KP+   F +   AC     A+ + K+ H  + +  + + + V +AL+  Y K   +E A
Sbjct: 74  IKPDMPVFLAAAKACAVSGDAL-RVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGA 132

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
             VF     RD+VSW S+   Y + G  +K ++VF+EM    ++ + +T   ++ AC   
Sbjct: 133 RRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAEL 192

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
             +  G++     V  H +   +   S +V LY++   + +A  + + MP     + W  
Sbjct: 193 KDLKSGKEIHGFAV-RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVS-WNG 250

Query: 655 VLAA 658
           VL A
Sbjct: 251 VLTA 254



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 143/328 (43%), Gaps = 54/328 (16%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFL-----GIR------------- 70
           ++ + +FD  P R+ V +N +L  Y ++  +++  +LFL     G+R             
Sbjct: 231 REARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGC 290

Query: 71  -----------------RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDV 113
                            ++G      T+SS+L  C    +   G+++HC   +     D+
Sbjct: 291 MENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDL 350

Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE 173
             +T+L+ +Y +  ++   R VFD M   +VV+W +++   A +      L LF +M + 
Sbjct: 351 TSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLS 410

Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            ++PNS TF+ VL   +   +V   VQ+ ++M   +  E   +  + ++ +Y ++  + +
Sbjct: 411 RVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNE 470

Query: 233 ARAVFDGME-DRDSITWNSMVAG---YVTNEL-HMEAFETF----NNMGLAGAELTRSTF 283
           A     GM  +  +  W +++A    Y   EL  + A + F    NN G          +
Sbjct: 471 AYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPG---------NY 521

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGI 311
           VS+  +  T K    A Q+   + + GI
Sbjct: 522 VSLFNILVTAKMWSEASQVRILMKERGI 549


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/657 (34%), Positives = 368/657 (56%), Gaps = 21/657 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QV+  +I +G      +    I+  L    V  A   F  + + D + WN+++ GY    
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           +       + +M ++       TF+ V+K C  T    + +Q+H Q  K G   +  ++ 
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            L+  Y+K G++  A  +F  + + + VVSWT++ISG++QNG    A+N F +M +  V+
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHD-RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183

Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
           P+      ++TA   V        +H  + K   E    +  +L   Y K+G+++ A   
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 243

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F  +++ +++ W+AM++GYA  G  E A+K++R++ ++ ++ +  T  S + A +A   +
Sbjct: 244 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLA-SAQVGS 302

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +E  +       K++  +   V++ L+ MY+K G+I  A  VF R   +D+V W+ MI G
Sbjct: 303 LELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMG 362

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
           Y  HGH ++A+ ++ EM++  +  +  TFIG++TAC ++GLV EG + F +M  +H I P
Sbjct: 363 YGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEP 421

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
             +HYSC+VDL  RAG L +A D I  MP     +VW  +L+AC+              L
Sbjct: 422 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQL 481

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L P+++  YV LSN+YA+   W   A VR +M  + + K+ G+S IE+     +F  G
Sbjct: 482 FILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVG 541

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SHP+S +I+ +L+ L  RLK AGY P    VL D++ E  E  L  HSERLA+A+G++
Sbjct: 542 DRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGII 601

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +T  G  L+I KNLR C +CH+ IKLISKL  R+I++RD  RFHHFK+G+CSCGD+W
Sbjct: 602 STAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 199/409 (48%), Gaps = 5/409 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           QV+ + + SG  +   +    ++  +   +V    + F +++E +++ W +++ GY +  
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
           + D  + ++  MQ+  + PN FTF  VL       +     Q+H    K G      V N
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQN 124

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           +L+SMY K   +  AR VFD + DR  ++W S+++GYV N   MEA   F  M     + 
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKP 184

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
                VSV+      ++L   + +H  V K G++F+ +I   L   Y+K G +E A   F
Sbjct: 185 DWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFF 244

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
           + M E  +++ W AMISG+  NG  + A+  F +M  + +R +  T    + A   V   
Sbjct: 245 NRM-EKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 303

Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
           +    +  +I K+ Y     V T L++ Y K G +  A  VF+ + +KD+V WS M+ GY
Sbjct: 304 ELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGY 363

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
              G  + A+ +Y ++   GV PN+ TF  ++ AC       E  + FH
Sbjct: 364 GLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 412



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 155/312 (49%), Gaps = 1/312 (0%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   VLK CG       G+Q+H +  K GF  +V V  SLV +Y +   +   R VFD +
Sbjct: 87  TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 146

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           ++  VVSWTS++SGY +N      L +F  M+   +KP+     +V+    +   +    
Sbjct: 147 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 206

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +H +V K G E    +  +L +MY K  +V  AR  F+ ME  + I WN+M++GY  N 
Sbjct: 207 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 266

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA + F  M      +   T  S +   A    L LAR L   + K+    D  + T
Sbjct: 267 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNT 326

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
           GL+  Y+KCG +  A  +F  + + KDVV W+ MI G+  +G    A+  + +M + GV 
Sbjct: 327 GLIDMYAKCGSIYLARCVFDRVAD-KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 385

Query: 380 PNGFTYSIILTA 391
           PN  T+  +LTA
Sbjct: 386 PNDGTFIGLLTA 397



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 146/322 (45%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+   R  V +  ++  Y ++    EALN+F  +R+  +      L SV+     + D
Sbjct: 142 VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVED 201

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ +H    K G   + ++  SL  +Y +   VE  R  F+ M + N++ W +++SG
Sbjct: 202 LGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISG 261

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA N   +  ++LF  M  + I+ +S T  + +   A  G +  A  +   + K+     
Sbjct: 262 YANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDD 321

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           T V   LI MY K   +  AR VFD + D+D + W+ M+ GY  +    EA   +N M  
Sbjct: 322 TFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQ 381

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG      TF+ ++  C  +  ++   +L   +  +GI+  H   + ++    + G +  
Sbjct: 382 AGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQ 441

Query: 334 ASKIFSMMREMKDVVSWTAMIS 355
           A      M     V  W A++S
Sbjct: 442 AYDFIMSMPIKPGVSVWGALLS 463


>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
          Length = 641

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/526 (40%), Positives = 341/526 (64%), Gaps = 20/526 (3%)

Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           H+Q+++ G+  D      LM  YSKCG +E A K+F  M  ++ +VSW  M+  H QNG 
Sbjct: 70  HAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEM-PVRSLVSWNTMVGSHTQNGD 128

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
            + A+  F QM +EG+  + FT S ++ A  A        Q+H   +KT  + +  VGTA
Sbjct: 129 SEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTA 188

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           LL+ Y K G++ +A+ VFE + E+  V WS+M+AGY Q    E A+ ++ +  + G++ N
Sbjct: 189 LLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHN 248

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
           +FT SS ++AC A +A +E GKQ  A   K  + + + V S+L+ MY+K G IE A  VF
Sbjct: 249 QFTISSALSACAARAALIE-GKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVF 307

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
               ++++V WN+M+ G+++H  + +A+  F++M++  +  + IT+I V+TAC+H GLV+
Sbjct: 308 SSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVE 367

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +G++YFD+M+  H++ P + HYSCMVD+  RAG+L +A D+I+RMPF A+A++W ++LA+
Sbjct: 368 KGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLAS 427

Query: 659 CR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           CR              L  ++PH++  +VLLSN+YAA   W+E AR R L+ + K KKE 
Sbjct: 428 CRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKAKKER 487

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           G SWIE+K+K +SF+ G+ +HP+  +IY KLE+L   +K  GYK  T + L D+++  K+
Sbjct: 488 GKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQ 547

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
            +L  HSE+LA+ FG++  P GAP++I+KNLR+CGDCH+ +KL S+
Sbjct: 548 ELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASR 593



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 164/295 (55%), Gaps = 1/295 (0%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G   H + ++ G   D   S  L+++Y +   VE  R++FD+M   ++VSW +++  + +
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N  +++ L LF +MQ EGI  + FT S+V+   A +  V    Q+H   +K   +    V
Sbjct: 126 NGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             AL+ +Y K  +V+DA  VF+ M +R  +TW+SMVAGYV NEL+ EA   F+     G 
Sbjct: 186 GTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E  + T  S +  CA    L   +Q+ + + K GI  +  + + L+  Y+KCG +E+A  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYI 305

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +FS + E K+VV W AM+SG  ++     A+ +F +M + G+ PN  TY  +LTA
Sbjct: 306 VFSSVEE-KNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTA 359



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 150/266 (56%), Gaps = 12/266 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           + LFD  P R+ V +N ++  + ++   ++AL LF+ +++ G+     T+SSV+  C   
Sbjct: 102 RKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAK 161

Query: 90  -CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
            C+F+    +Q+H   +K+    +V V T+L+D+Y +   V+D   VF+ M E + V+W+
Sbjct: 162 CCVFE---CKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWS 218

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S+++GY +N++ +  L LFHR Q  G++ N FT S+ L   A    +    QV  ++ K 
Sbjct: 219 SMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKT 278

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA---F 265
           G      V ++LI MY K  ++ +A  VF  +E+++ + WN+M++G+  +   +EA   F
Sbjct: 279 GIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYF 338

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCA 291
           E    MG+   E+   T++SV+  C+
Sbjct: 339 EKMQQMGICPNEI---TYISVLTACS 361



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 145/267 (54%), Gaps = 3/267 (1%)

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           + A+     HA II+            L+N Y K G+++ A K+F+ +  + +V+W+ M+
Sbjct: 61  RAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMV 120

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
             + Q GD+E A+ ++ Q+  EG+  +EFT SSV+ AC A     E  KQ H  ++K  L
Sbjct: 121 GSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFE-CKQLHGFALKTAL 179

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           ++ + V +AL+ +Y+K G ++ AS VF+   +R  V+W+SM+ GY Q+   ++AL +F  
Sbjct: 180 DSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 239

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
            +   LE +  T    ++AC     + EG+Q   ++     I   +   S ++D+Y++ G
Sbjct: 240 AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCKT-GIGSNIFVISSLIDMYAKCG 298

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAA 658
           ++E+A  + + +    +  +W  +L+ 
Sbjct: 299 IIEEAYIVFSSVE-EKNVVLWNAMLSG 324



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 98/194 (50%), Gaps = 8/194 (4%)

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           ++L   G++    +    +   +A + A  +G   HA  I+  L      S+ L+ MYSK
Sbjct: 35  KELVWVGIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSK 94

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G +ESA ++F     R LVSWN+M+  + Q+G ++KAL +F +M+++ +     T   V
Sbjct: 95  CGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSV 154

Query: 588 ITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           + AC     V E +Q     +    + +++      + ++D+Y++ G+++ A  +   MP
Sbjct: 155 VCACAAKCCVFECKQLHGFALKTALDSNVFVG----TALLDVYAKCGLVKDASLVFECMP 210

Query: 645 FAASATVWRTVLAA 658
             +  T W +++A 
Sbjct: 211 ERSDVT-WSSMVAG 223


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/584 (37%), Positives = 337/584 (57%), Gaps = 26/584 (4%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           ++ T+  +I  C     L    ++H  +L NG D D  + T L+  YS  G ++ A K+F
Sbjct: 76  SQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 135

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL--------T 390
              R+ + +  W A+       G  +  +  + +M R GV  + FTY+ +L        T
Sbjct: 136 DKTRK-RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           A       ++HAH+ +  Y     + T L++ Y + G +D A+ VF  +  +++V+WSAM
Sbjct: 195 ADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAM 254

Query: 451 LAGYAQIGDTEGAVKIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           +A YA+ G    A++ +R++ +E     PN  T  SV+ AC A  AA+EQG+  H   ++
Sbjct: 255 IACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQAC-ASLAALEQGRLIHGYILR 313

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L++ L V SALVTMY + G ++    VF R   RD+VSWNS+I  Y  HG+ +KA+++
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQI 373

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
           F+EM         +TF+ V+ AC+H GLV+EG++ F+ M  +H I P +EHY+CMVDL  
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLG 433

Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
           RA  L++A  ++  M       VW ++L +CR              L +L+P ++  YVL
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L+++YA    W E  RV+KL+  R ++K  G  W+EV+ K YSF++ D  +P   QI++ 
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNPLMEQIHAF 553

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           L +L+  +K+ GY P T  VL +++ E KE I+  HSE+LA+AFGL+ T  G P++I KN
Sbjct: 554 LVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKN 613

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LR+C DCH   K ISK   ++I+VRD NRFH FK G+CSCGDYW
Sbjct: 614 LRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 215/483 (44%), Gaps = 34/483 (7%)

Query: 13  PQTKQP--------PKS-LRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEAL 63
           PQ  QP        P+S L+ P  S    +L   S     +  N+L+   C++   ++AL
Sbjct: 7   PQVIQPNYYTVNFLPRSPLKPPLCSVALNNLSISSGAGAKISNNQLIQSLCKEGKLKQAL 66

Query: 64  NLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY 123
            +   + +   P    T   ++  CG       G +VH   + +G  +D  ++T L+ +Y
Sbjct: 67  RV---LSQESSP-SQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMY 122

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
               +V+  R+VFD   +  +  W +L          + VL L+ +M   G++ + FT++
Sbjct: 123 SDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYT 182

Query: 184 TVLGVLADEGIVATAV----QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            VL         A  +    ++H  + + G      +   L+ MY +   V  A  VF+G
Sbjct: 183 YVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNG 242

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELR 297
           M  R+ ++W++M+A Y  N    EA  TF  M     + + +  T VSV++ CA+   L 
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALE 302

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
             R +H  +L+ G+D    + + L+  Y +CGK++   ++F  M + +DVVSW ++IS +
Sbjct: 303 QGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHD-RDVVSWNSLISSY 361

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQV--HAHIIKTN 408
             +G    A+  F +M   G  P   T+  +L A       +     F+     H IK  
Sbjct: 362 GVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQ 421

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
            E        +++   +   LDEAAK V ++  E     W ++L      G+ E A +  
Sbjct: 422 VEHY----ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERAS 477

Query: 468 RQL 470
           R+L
Sbjct: 478 RRL 480


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/592 (37%), Positives = 348/592 (58%), Gaps = 22/592 (3%)

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           M+A ++  + GL       +T+  +IK C + + +     +   +  NG      +   L
Sbjct: 46  MKAMDSLQSHGLWADS---ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVL 102

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y K   + DA ++F  M + ++V+SWT MIS + +      A+     M R+ VRPN
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161

Query: 382 GFTYSIILTAQPAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            +TYS +L +   +S  + +H  IIK   E    V +AL++ + K G  ++A  VF+ + 
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D + W++++ G+AQ   ++ A+++++++   G    + T +SV+ ACT   A +E G 
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL-ALLELGM 280

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q H   +K   +  L +++ALV MY K G++E A  VF + ++RD+++W++MI G AQ+G
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
           ++++AL++F+ M+    + + IT +GV+ AC+HAGL+++G  YF  M   + I P  EHY
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQP 666
            CM+DL  +AG L+ A+ ++N M     A  WRT+L ACR+              I+L P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            D+  Y LLSN+YA +  W     +R  M DR +KKE G SWIEV  + ++F+ GD SHP
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           Q  ++  KL +L  RL   GY P+T++VLQD++ E  E  L  HSE+LA+AFGL+  P  
Sbjct: 519 QIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIE 578

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             ++I KNLR+CGDCH   KL SKLE R IV+RD  R+HHF++G CSCGDYW
Sbjct: 579 KVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 221/453 (48%), Gaps = 44/453 (9%)

Query: 17  QPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL 76
           +P  +LR   YS  DQ+L          E+ RL ++  RD     A+     ++  GL  
Sbjct: 12  RPVVTLRCS-YSSTDQTLL-------LSEFTRLCYQ--RDL--PRAMKAMDSLQSHGLWA 59

Query: 77  FGSTLSSVLKTCGCLFDHVFGRQVH-----CECVKSGFARD----VNVSTSLVDLYMRTN 127
             +T S ++K C      +  R VH     C  +     R     VNV   L+++Y++ N
Sbjct: 60  DSATYSELIKCC------ISNRAVHEGNLICRHLYFNGHRPMMFLVNV---LINMYVKFN 110

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
            + D  ++FD M + NV+SWT+++S Y++ K++ + LEL   M  + ++PN +T+S+VL 
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
                  ++    +H  +IK G E    V +ALI ++ K     DA +VFD M   D+I 
Sbjct: 171 SCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WNS++ G+  N     A E F  M  AG    ++T  SV++ C     L L  Q H  ++
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           K   D D  +   L+  Y KCG +EDA ++F+ M+E +DV++W+ MISG  QNG    A+
Sbjct: 288 K--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKE-RDVITWSTMISGLAQNGYSQEAL 344

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT------ALLN 421
             F +M   G +PN  T   +L A       +   +  ++  +K + +         +++
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS-MKKLYGIDPVREHYGCMID 403

Query: 422 AYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAG 453
              K G LD+A K+  E+  E D V W  +L  
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436


>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 230/615 (37%), Positives = 348/615 (56%), Gaps = 66/615 (10%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           LT     S++  C+T    R A +LH+ V++ G+D D  +   L  AY+  G+++ +   
Sbjct: 22  LTADRAASLLAACSTA---RRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHS--- 75

Query: 338 FSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +++   KD   + +T+ I  H   G     +     M  EG+ P   T S  L A   +
Sbjct: 76  LTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGL 135

Query: 396 SPFQ-VHAHIIKTNYEKSFSVGTALLN-------------------------------AY 423
           S  + +HA+  K        V TALL+                                Y
Sbjct: 136 SLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCY 195

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
              G LD+A ++F+ +  KD + W+AM+ GY Q G    A++++R++     +P+E T  
Sbjct: 196 ANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVV 255

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALC------VSSALVTMYSKKGNIESASEV 537
            V++A  A    VE GK  H     + + N+ C      V++ALV MY K G++E A  V
Sbjct: 256 LVLSA-VAQLGTVESGKWLH-----SYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAV 309

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           F     +D+V WN+MI GYA HG ++KALE+F ++R Q L    ITFIG++ AC+H+GLV
Sbjct: 310 FHGIGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLV 369

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           +EG+ +F  M +E+ I P +EHY CMVDL  RAG++E+A  ++  +     A +W ++LA
Sbjct: 370 EEGRSFFQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLA 429

Query: 658 ACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
           ACR              L++    +S +Y+LLSN+YAA G W+E ARVR +M    ++KE
Sbjct: 430 ACRLHKNMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKE 489

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHK 763
            G S IE+  K Y F+AGD+SHP +++IY+ L++++  +K+ G+ P T  VL D+D+  K
Sbjct: 490 PGCSAIEIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATK 549

Query: 764 EAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNR 823
           E  L+ HSE+LA+AFGL+++  G+ ++IVKNLR C DCH V+KLISK+  R IV RD NR
Sbjct: 550 EKALAVHSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNR 609

Query: 824 FHHFKEGLCSCGDYW 838
           FHHF +G C+CGDYW
Sbjct: 610 FHHFVDGSCTCGDYW 624



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 150/359 (41%), Gaps = 40/359 (11%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +L  R+     + Y   +  +    LH   L L   +   GL     TLS+ L  C  L 
Sbjct: 77  TLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGL- 135

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYM---------------------------- 124
               GR +H    K   + D  V+T+L+ +Y                             
Sbjct: 136 --SLGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLT 193

Query: 125 ---RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
                  ++D RR+FD +   + + W +++ GY ++   +  L+LF RM     +P+  T
Sbjct: 194 CYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVT 253

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGG--EVVTSVCNALISMYLKSKMVRDARAVFDG 239
              VL  +A  G V +   +H+ V KN    ++   V  AL+ MY K   + DA AVF G
Sbjct: 254 VVLVLSAVAQLGTVESGKWLHSYV-KNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHG 312

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
           + ++D + WN+M+ GY  +    +A E F  +   G   T  TF+ ++  C+ +  +   
Sbjct: 313 IGNKDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEG 372

Query: 300 RQLHSQVLKNGIDFDHNIR-TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           R    Q +++    D  I   G MV    + G +E+A  +   +    D V W ++++ 
Sbjct: 373 RSFF-QSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAA 430



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 166/394 (42%), Gaps = 44/394 (11%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H   V+ G   D  V+  L   Y  +  ++    +     +   + +TS +  ++   
Sbjct: 42  ELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRG 101

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLG------------------VLADEGIVATAV- 199
           ++   L L   M  EG+ P + T S  L                    L+ +  VATA+ 
Sbjct: 102 LHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLSLGRALHAYAFKLALSGDSYVATALL 161

Query: 200 ----------QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
                         +  +     V SV  A+++ Y     + DAR +FDG+  +D I WN
Sbjct: 162 SMYARAGDAAAARALFDEMPDPHVVSV-TAMLTCYANMGALDDARRLFDGLPRKDFICWN 220

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           +M+ GY  +    EA + F  M  + AE    T V V+   A    +   + LHS V KN
Sbjct: 221 AMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYV-KN 279

Query: 310 GIDFDHNIR--TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
                 N+R  T L+  Y KCG +EDA  +F  +   KD+V W AMI+G+  +G    A+
Sbjct: 280 SRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGN-KDIVVWNAMINGYAMHGDSRKAL 338

Query: 368 NFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALL 420
             F Q+  +G+ P   T+  +L A       +   S FQ   H  +   +        ++
Sbjct: 339 EMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEH--EYGIDPKIEHYGCMV 396

Query: 421 NAYVKKGILDEAAKVFE-LIDEKDIVAWSAMLAG 453
           +   + G+++EA  + + L    D V W ++LA 
Sbjct: 397 DLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAA 430


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/640 (35%), Positives = 340/640 (53%), Gaps = 81/640 (12%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            ++ ++ +++ C  +K L  A+++H   LKN  + D ++   L   Y  C ++  A ++F
Sbjct: 7   VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV--- 395
             +     V+ W  +I  +  NG  D A++ +  M   GVRPN +TY  +L A   +   
Sbjct: 67  DEIPN-PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125

Query: 396 -SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               ++H+H      E    V TAL++ Y K GIL EA ++F  +  +D+VAW+AM+AG 
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPN----------------------------EFTFSSVI 486
           +  G  + AV++  Q+  EG+ PN                            E ++S++I
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMI 245

Query: 487 NACTAPSAAVEQGKQFH-------------------ACSIKAKLNNALC----------- 516
               A     E    F                    ACS  A L +  C           
Sbjct: 246 GGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFA 305

Query: 517 ----VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               + +AL+ MYSK G I  A EVF R  + D+VSWN+MI GY  HG   +AL +F ++
Sbjct: 306 TDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDL 365

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
               L+ D ITFI ++++C+H+GLV EG+ +FD M  +  I P MEH  CMVD+  RAG+
Sbjct: 366 LALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGL 425

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNM 678
           +++A   I  MPF     +W  +L+ACR+               SL P  +  +VLLSN+
Sbjct: 426 IDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNI 485

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           Y+A G W + A +R    D  +KK  G SWIE+    ++F+ GD SH Q +QI  KLEEL
Sbjct: 486 YSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEEL 545

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVC 798
              +K  GY+ + S+V QD+++E KE IL  HSE+LAIAFG++   AG P+ + KNLRVC
Sbjct: 546 LVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVC 605

Query: 799 GDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           GDCHT IK ++ + +R+I VRD NRFHHFK G C+CGD+W
Sbjct: 606 GDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 225/494 (45%), Gaps = 52/494 (10%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            +++H   +K+    D +V   L  LY+  N V   RR+FD++   +V+ W  ++  YA 
Sbjct: 27  AKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAW 86

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           N   D  ++L+H M   G++PN +T+  VL   +    +   V++H+     G E    V
Sbjct: 87  NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
           C AL+  Y K  ++ +A+ +F  M  RD + WN+M+AG     L  +A +    M   G 
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
               ST V V+  C     L  AR                                   K
Sbjct: 207 CPNSSTIVGVLPTCQC---LLYAR-----------------------------------K 228

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           IF +M  +++ VSW+AMI G++ +  +  A++ F  M   G+ P+  T   +L A   ++
Sbjct: 229 IFDVM-GVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLA 287

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
             Q     H ++I   +     +  AL++ Y K G +  A +VF  +D  DIV+W+AM+ 
Sbjct: 288 ALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMII 347

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC----SIK 508
           GY   G    A+ ++  L + G+KP++ TF  ++++C+     +E    F A     SI 
Sbjct: 348 GYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIV 407

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALE 567
            ++ + +C    +V +  + G I+ A    +    + D+  W++++     H + +   E
Sbjct: 408 PRMEHCIC----MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEE 463

Query: 568 VFKEMRRQDLEFDG 581
           V K+++    E  G
Sbjct: 464 VSKKIQSLGPESTG 477



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 211/450 (46%), Gaps = 47/450 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P  + + +N+++  Y  +     A++L+  +  LG+     T   VLK C  L
Sbjct: 63  RRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGL 122

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G ++H      G   DV V T+LVD Y +   + + +R+F  M+  +VV+W +++
Sbjct: 123 LAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI 182

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G +   + D  ++L  +MQ EGI PNS   ST++GVL                      
Sbjct: 183 AGCSLYGLCDDAVQLIMQMQEEGICPNS---STIVGVL---------------------- 217

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                C  L+           AR +FD M  R+ ++W++M+ GYV ++   EA + F  M
Sbjct: 218 ---PTCQCLLY----------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMM 264

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L+G +   +T + V+  C+    L+     H  ++  G   D  I   L+  YSKCGK+
Sbjct: 265 QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKI 324

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A ++F+ M +  D+VSW AMI G+  +G    A+  F  +   G++P+  T+ I L +
Sbjct: 325 SFAREVFNRM-DRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITF-ICLLS 382

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSV------GTALLNAYVKKGILDEAAK-VFELIDEKDI 444
             + S   +   +      + FS+         +++   + G++DEA   +  +  E D+
Sbjct: 383 SCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDV 442

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
             WSA+L+      + E   ++ +++ S G
Sbjct: 443 RIWSALLSACRIHKNIELGEEVSKKIQSLG 472


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/563 (39%), Positives = 340/563 (60%), Gaps = 25/563 (4%)

Query: 300 RQLHSQVLKNGIDF-DHNIRTGL---MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           RQ+H+  +++G+   D  +   L   +V+      M  A K+FS + +  +V  W  +I 
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93

Query: 356 GHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYE 410
           G+ + G    A + + +M   G V P+  TY  ++ A   ++  +    +H+ +I++ + 
Sbjct: 94  GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
               V  +LL+ Y   G +  A KVF+ + EKD+VAW++++ G+A+ G  E A+ +Y ++
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
            S+G+KP+ FT  S+++AC A   A+  GK+ H   IK  L   L  S+ L+ +Y++ G 
Sbjct: 214 NSKGIKPDGFTIVSLLSAC-AKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-QDLEFDGITFIGVIT 589
           +E A  +F     ++ VSW S+I G A +G  K+A+E+FK M   + L    ITF+G++ 
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC+H G+V EG +YF  M  E+ I P +EH+ CMVDL +RAG ++KA + I  MP   + 
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392

Query: 650 TVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
            +WRT+L AC              +++ L+P+ S  YVLLSNMYA+   W +  ++RK M
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
               VKK  G+S +EV N+ + FL GD SHPQS+ IY+KL+E++ RL+  GY P  S V 
Sbjct: 453 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVY 512

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
            D+++E KE  +  HSE++AIAF L++TP  +P+ +VKNLRVC DCH  IKL+SK+  R+
Sbjct: 513 VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNRE 572

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           IVVRD +RFHHFK G CSC DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 42/377 (11%)

Query: 7   LKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF 66
           L SL +P    PP S     +SK ++ +       N   +N L+  Y        A +L+
Sbjct: 60  LVSLPSP----PPMSYAHKVFSKIEKPI-------NVFIWNTLIRGYAEIGNSISAFSLY 108

Query: 67  LGIRRLGLPLFGS-TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR 125
             +R  GL    + T   ++K    + D   G  +H   ++SGF   + V  SL+ LY  
Sbjct: 109 REMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN 168

Query: 126 TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
             +V    +VFD M E ++V+W S+++G+A N   +  L L+  M  +GIKP+ FT  ++
Sbjct: 169 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L   A  G +    +VH  +IK G        N L+ +Y +   V +A+ +FD M D++S
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           ++W S++ G   N    EA E F  M    GL   E+   TFV ++  C+          
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI---TFVGILYACS---------- 335

Query: 302 LHSQVLKNGIDFDHNIRT-----------GLMV-AYSKCGKMEDASKIFSMMREMKDVVS 349
            H  ++K G ++   +R            G MV   ++ G+++ A +    M    +VV 
Sbjct: 336 -HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394

Query: 350 WTAMISGHLQNGAIDLA 366
           W  ++     +G  DLA
Sbjct: 395 WRTLLGACTVHGDSDLA 411



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 188/401 (46%), Gaps = 39/401 (9%)

Query: 98  RQVHCECVKSGFA-RDVNVSTSLVDLYMRT----NNVEDGRRVFDDMNES-NVVSWTSLL 151
           RQ+H   ++ G +  D  +   L+  Y+ +      +    +VF  + +  NV  W +L+
Sbjct: 34  RQIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92

Query: 152 SGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            GYA    +     L+  M+V G ++P++ T+  ++  +     V     +H++VI++G 
Sbjct: 93  RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
             +  V N+L+ +Y     V  A  VFD M ++D + WNS++ G+  N    EA   +  
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M   G +    T VS++  CA    L L +++H  ++K G+  + +    L+  Y++CG+
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIIL 389
           +E+A  +F  M + K+ VSWT++I G   NG    A+  F  M + EG+ P   T+  IL
Sbjct: 273 VEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 331

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            A         H  ++K  +E            Y ++  + E  K+     E  I  +  
Sbjct: 332 YACS-------HCGMVKEGFE------------YFRR--MREEYKI-----EPRIEHFGC 365

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
           M+   A+ G  +   K Y  + S  ++PN   + +++ ACT
Sbjct: 366 MVDLLARAGQVK---KAYEYIKSMPMQPNVVIWRTLLGACT 403


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 243/685 (35%), Positives = 369/685 (53%), Gaps = 27/685 (3%)

Query: 179 SFTFSTVLGVLADEGIVATAVQ----VHTMVIKN-GGEVVTSVCNALISMYLKSKMVRDA 233
           S   +  LG+L    I  ++++    VH  ++K         + N LI+MY K      A
Sbjct: 2   SLLTADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA 61

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R V      R+ ++W S+V+G   N     A   F  M   G      TF  V K  A+ 
Sbjct: 62  RLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASL 121

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           +     +Q+H+  +K G   D  +       Y K    +DA K+F  + E +++ +W A 
Sbjct: 122 RLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE-RNLETWNAY 180

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS----PFQVHAHIIKTNY 409
           IS  + +G    A+  F +  R G +PN  T+   L A           Q+H  + ++ +
Sbjct: 181 ISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGF 240

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +   SV   L++ Y K   +  +  +F  +  K+ V+W +++A Y Q  + E A  +Y +
Sbjct: 241 DTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLR 300

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
              E V+ ++F  SSV++AC A  A +E G+  HA ++KA +   + V SALV MY K G
Sbjct: 301 SRKEIVETSDFMISSVLSAC-AGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCG 359

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM--RRQDLEFDGITFIGV 587
            IE + + F    +++LV+ NS+I GYA  G    AL +F++M  R      + +TF+ +
Sbjct: 360 CIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSL 419

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           ++AC+ AG V+ G + FD M + + I P  EHYSC+VD+  RAGM+E+A + I +MP   
Sbjct: 420 LSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKP 479

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           + +VW  +  ACR              L  L P DS  +VLLSN +AA G W E   VR+
Sbjct: 480 TISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVRE 539

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
            M    +KK AGYSWI VKN+ ++F A D SH  + +I + L +L  +++ AGYKPD   
Sbjct: 540 EMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKL 599

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
            L D+++E K A +S HSE+LA+AFGLVA P   P++I KNLR+CGDCH+  K +S   +
Sbjct: 600 SLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVK 659

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+I+VRD NRFH FK+G+CSC DYW
Sbjct: 660 REIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/474 (29%), Positives = 241/474 (50%), Gaps = 11/474 (2%)

Query: 96  FGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            GR VH   VK+        ++  L+++Y + ++ E  R V       NVVSWTSL+SG 
Sbjct: 24  LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGL 83

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A+N      L  F  M+ EG+ PN FTF  V   +A   +  T  Q+H + +K G  +  
Sbjct: 84  AQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDV 143

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  +   MY K+++  DAR +FD + +R+  TWN+ ++  VT+    EA E F      
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRI 203

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G +    TF   +  C+    L L  Q+H  V ++G D D ++  GL+  Y KC ++  +
Sbjct: 204 GGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSS 263

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             IF+ M  MK+ VSW ++++ ++QN   + A   + +  +E V  + F  S +L+A   
Sbjct: 264 EIIFAEM-GMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAG 322

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           ++  +    +HAH +K   E++  VG+AL++ Y K G ++++ + F+ + EK++V  +++
Sbjct: 323 MAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSL 382

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGV--KPNEFTFSSVINACTAPSAAVEQG-KQFHACSI 507
           + GYA  G  + A+ ++  +   G    PN  TF S+++AC+  + AVE G K F +   
Sbjct: 383 IGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSR-AGAVENGMKIFDSMKS 441

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHG 560
              +       S +V M  + G +E A E  K+   +  +S W ++      HG
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHG 495



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 189/402 (47%), Gaps = 12/402 (2%)

Query: 1   MTLSPALKSLINPQTKQPPKSLRSPF----YSKKDQSLFDR-----SPQRNFVEYNRLLF 51
           M L   + + I      PP    + +    YSK D     R     +P RN V +  L+ 
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVS 81

Query: 52  EYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR 111
              ++     AL  F  +RR G+     T   V K    L   V G+Q+H   VK G   
Sbjct: 82  GLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRIL 141

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           DV V  S  D+Y +T   +D R++FD++ E N+ +W + +S    +      +E F   +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFR 201

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
             G +PNS TF   L   +D  ++   +Q+H +V ++G +   SV N LI  Y K K +R
Sbjct: 202 RIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
            +  +F  M  +++++W S+VA YV N    +A   +        E +     SV+  CA
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACA 321

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
               L L R +H+  +K  ++ +  + + L+  Y KCG +ED+ + F  M E K++V+  
Sbjct: 322 GMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPE-KNLVTLN 380

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGV--RPNGFTYSIILTA 391
           ++I G+   G +D+A+  F  M   G    PN  T+  +L+A
Sbjct: 381 SLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSA 422


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/661 (35%), Positives = 369/661 (55%), Gaps = 23/661 (3%)

Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLA 190
            R +FD M   + +SWT+L++GY     +   L LF  M V  G + + F  S  L   A
Sbjct: 76  ARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACA 135

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
               +     +H   +K+G      V +ALI MY+K   +     VF+ M  R+ ++W +
Sbjct: 136 LGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTA 195

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           ++AG V    +ME    F+ M  +       TF   +K  A +  L   + +H+Q +K G
Sbjct: 196 IIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQG 255

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
            D    +   L   Y+KCGK +   ++F  MR M DVVSWT +IS ++Q G  + AV  F
Sbjct: 256 FDESSFVINTLATMYNKCGKPDYVMRLFEKMR-MPDVVSWTTLISTYVQMGEEEHAVEAF 314

Query: 371 CQMTREGVRPNGFTYSIILT--AQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
            +M +  V PN +T++ +++  A  A + +  Q+H H+++     + SV  +++  Y K 
Sbjct: 315 KRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKC 374

Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
           G+L  A+ VF  I  KDI++WS +++ Y+Q G  + A      +  EG KPNEF  SSV+
Sbjct: 375 GLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVL 434

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           + C    A +EQGKQ HA  +   +++   V SA+++MYSK G+++ AS++F   +  D+
Sbjct: 435 SVC-GSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDI 493

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           +SW +MI GYA+HG++++A+ +F+++    L+ D + FIGV+TAC HAG+VD G  YF +
Sbjct: 494 ISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFML 553

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------ 660
           M N + I P+ EHY C++DL  RAG L +A  II  MPF     VW T+L ACR      
Sbjct: 554 MTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVD 613

Query: 661 --------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                   L+ L P+ +  ++ L+N+YAA G W+E A +RKLM  + V KE G+SW+ V 
Sbjct: 614 RGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVN 673

Query: 713 NKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSE 772
           ++  +F+AGD +HPQS  I + L+ LS  + DA  + +   + +D++D     ILS  + 
Sbjct: 674 DQLNAFVAGDQAHPQSEHITTVLKLLSANIGDA--QQEIRSLHEDVEDLAYSCILSHGNA 731

Query: 773 R 773
           R
Sbjct: 732 R 732



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/465 (31%), Positives = 239/465 (51%), Gaps = 6/465 (1%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV-LKTC 88
           K + +FD+   R+ + +  L+  Y   S   EAL LF  +     P     + SV LK C
Sbjct: 75  KARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKAC 134

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               +  FG  +H   VKSG    V VS++L+D+YM+   +E G RVF+ M   NVVSWT
Sbjct: 135 ALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWT 194

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           ++++G      N   L  F  M    +  +S TF+  L   AD  ++     +HT  IK 
Sbjct: 195 AIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQ 254

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +  + V N L +MY K         +F+ M   D ++W ++++ YV       A E F
Sbjct: 255 GFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAF 314

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
             M  +     + TF +VI  CA     +   Q+H  VL+ G+    ++   ++  YSKC
Sbjct: 315 KRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKC 374

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G ++ AS +F  +   KD++SW+ +IS + Q G    A ++   M REG +PN F  S +
Sbjct: 375 GLLKSASLVFHGITR-KDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSV 433

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L+   +++      QVHAH++    +    V +A+++ Y K G + EA+K+F  +   DI
Sbjct: 434 LSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDI 493

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           ++W+AM+ GYA+ G ++ A+ ++ +++S G+KP+   F  V+ AC
Sbjct: 494 ISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTAC 538



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 237/435 (54%), Gaps = 16/435 (3%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N+ +   +K   +  AR +FD M  RD I+W +++AGYV      EA   F+NM +    
Sbjct: 61  NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120

Query: 278 LTRSTFVSV-IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                 +SV +K CA    +     LH   +K+G+     + + L+  Y K GK+E   +
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M   ++VVSWTA+I+G +  G     + +F +M R  V  +  T++I L A    S
Sbjct: 181 VFEKMMT-RNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSS 239

Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                  +H   IK  +++S  V   L   Y K G  D   ++FE +   D+V+W+ +++
Sbjct: 240 LLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLIS 299

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            Y Q+G+ E AV+ ++++    V PN++TF++VI++C A  AA + G+Q H   ++  L 
Sbjct: 300 TYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSC-ANLAAAKWGEQIHGHVLRLGLV 358

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           NAL V+++++T+YSK G ++SAS VF    ++D++SW+++I  Y+Q G+ K+A +    M
Sbjct: 359 NALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWM 418

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH----YSCMVDLYS 628
           RR+  + +      V++ C    L+++G+Q     V+ H +   ++H    +S ++ +YS
Sbjct: 419 RREGPKPNEFALSSVLSVCGSMALLEQGKQ-----VHAHLLCIGIDHEAMVHSAIISMYS 473

Query: 629 RAGMLEKAMDIINRM 643
           + G +++A  I N M
Sbjct: 474 KCGSVQEASKIFNGM 488



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 217/436 (49%), Gaps = 11/436 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG--CL 91
           +F++   RN V +  ++        + E L  F  + R  +     T +  LK      L
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             H  G+ +H + +K GF     V  +L  +Y +    +   R+F+ M   +VVSWT+L+
Sbjct: 241 LHH--GKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLI 298

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S Y +    +  +E F RM+   + PN +TF+ V+   A+        Q+H  V++ G  
Sbjct: 299 STYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLV 358

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              SV N++I++Y K  +++ A  VF G+  +D I+W+++++ Y       EAF+  + M
Sbjct: 359 NALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWM 418

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +       SV+ +C +   L   +Q+H+ +L  GID +  + + ++  YSKCG +
Sbjct: 419 RREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSV 478

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           ++ASKIF+ M+ + D++SWTAMI+G+ ++G    A+N F +++  G++P+   +  +LTA
Sbjct: 479 QEASKIFNGMK-INDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTA 537

Query: 392 --QPAVSPFQVHAHIIKTN-YEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKDIV 445
                +     +  ++ TN Y  S S      L++   + G L EA  +   +    D V
Sbjct: 538 CNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDV 597

Query: 446 AWSAMLAGYAQIGDTE 461
            WS +L      GD +
Sbjct: 598 VWSTLLRACRVHGDVD 613



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 114/235 (48%), Gaps = 9/235 (3%)

Query: 26  FYSK----KDQSL-FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            YSK    K  SL F    +++ + ++ ++  Y +    +EA +    +RR G       
Sbjct: 370 LYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFA 429

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           LSSVL  CG +     G+QVH   +  G   +  V ++++ +Y +  +V++  ++F+ M 
Sbjct: 430 LSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMK 489

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
            ++++SWT++++GYA +  +   + LF ++   G+KP+   F  VL      G+V     
Sbjct: 490 INDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGF- 548

Query: 201 VHTMVIKNGGEVVTSV--CNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMV 252
            + M++ N   +  S      LI +  ++  + +A  +   M    D + W++++
Sbjct: 549 YYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLL 603


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/672 (33%), Positives = 377/672 (56%), Gaps = 25/672 (3%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN 160
           H   VK G   DV    ++++ Y +   +     +FD+M   + VSW ++++G+      
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           +   ++   M+  G + + +TF ++L  +A  G+     QVH+++IK G        +AL
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           + MY K + + DA   F  +   ++++WN+M+ GY        AF   + M   G ++  
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
            T+  ++ L        L  QLH +++K+G++  + +   L+ +YSKCG ++DA +IF  
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS 260

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVS 396
              ++D+V+W ++++ +L     DLA      M   G  P+ ++Y+ I++A      + +
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNN 320

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKK--GILDEAAKVFELIDEKDIVAWSAMLAGY 454
              +H  +IK  +E+S  +  AL++ Y+K   G + EA  +FE ++ KD V+W+++L G 
Sbjct: 321 GRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGL 380

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +Q G +E AVK +  + S  +  + ++FS+V+ +C+   A  + G+Q H  ++K  L + 
Sbjct: 381 SQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCS-DLATFQLGQQIHVLALKYGLESN 439

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             VSS+L+ MYSK G IE A   F+   K   ++WN+++ GYAQHG    AL++F  M  
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEE 499

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           + ++ D ITF+ V+TAC+H GLV++G ++   M +++ + P MEHY+C VDLY R+G LE
Sbjct: 500 KKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLE 559

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A  +I  MPF    TVW+T L ACR              L+ ++P +   YVLLSNMY 
Sbjct: 560 EAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYG 619

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE---E 737
               W E+A+V++LM +R VKK  G+SWIEV N  ++F+A D SHP   QIY  LE   E
Sbjct: 620 NLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLLE 679

Query: 738 LSTRLKDA-GYK 748
             TR++DA G+K
Sbjct: 680 EITRMEDADGFK 691



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 274/550 (49%), Gaps = 23/550 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P R+ V +N ++  +      + + ++   +R  G  L   T  S+LK  G  F 
Sbjct: 55  LFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLK--GIAFA 112

Query: 94  HVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +F  G+QVH   +K G+A +V   ++L+D+Y +   +ED    F  +++ N VSW +++
Sbjct: 113 GMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMI 172

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYA+    +    L   M+ EG K +  T++ +L +L D        Q+H  +IK+G E
Sbjct: 173 NGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLE 232

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNN 270
           +V ++CNALI+ Y K   + DA+ +FD     RD +TWNS++A Y+       AF+   +
Sbjct: 233 LVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLID 292

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-- 328
           M   G E    ++ S+I  C         R LH  V+K G +    I   L+  Y K   
Sbjct: 293 MQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDY 352

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G M++A  IF  + E KD VSW ++++G  Q G+ + AV  F  M    +  + +++S +
Sbjct: 353 GSMKEALCIFESL-EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAV 411

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L +   ++ F    Q+H   +K   E +  V ++L+  Y K GI+++A + FE   +   
Sbjct: 412 LRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSS 471

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           + W+A++ GYAQ G    A+ ++  +  + VK +  TF +V+ AC+     VEQG +F  
Sbjct: 472 ITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHI-GLVEQGCKFLR 530

Query: 505 C-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
           C      +  ++ +  C     V +Y + G +E A  + +    K D   W + +     
Sbjct: 531 CMESDYGVPPRMEHYACA----VDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRS 586

Query: 559 HGHTKKALEV 568
            G+ + A +V
Sbjct: 587 CGNIELACQV 596



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 120/236 (50%), Gaps = 3/236 (1%)

Query: 22  LRSPFYSKKDQ-SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           L+S + S K+   +F+    ++ V +N +L    +    ++A+  FL +R   + +   +
Sbjct: 348 LKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYS 407

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            S+VL++C  L     G+Q+H   +K G   +  VS+SL+ +Y +   +ED RR F++ +
Sbjct: 408 FSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS 467

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           +++ ++W +L+ GYA++   +  L+LF  M+ + +K +  TF  VL   +  G+V    +
Sbjct: 468 KNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCK 527

Query: 201 -VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAG 254
            +  M    G           + +Y +S  + +A+A+ + M  + D+  W + +  
Sbjct: 528 FLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGA 583


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/607 (36%), Positives = 339/607 (55%), Gaps = 50/607 (8%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           ST+ ++I++C+ T+ L   +++H  +  +G      I   L+  Y+KCG + DA K+F  
Sbjct: 86  STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDE 145

Query: 341 M--REM----------------------------KDVVSWTAMISGHLQNGAIDLAVNFF 370
           M  R++                            KD  SWTAM++G+++    + A+  +
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205

Query: 371 CQMTR-EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
             M R    RPN FT SI + A  AV       ++H HI++   +    + ++L++ Y K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G +DEA  +F+ I EKD+V+W++M+  Y +         ++ +L     +PNE+TF+ V
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGV 325

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
           +NAC A     E GKQ H    +   +     SS+LV MY+K GNIESA  V     K D
Sbjct: 326 LNAC-ADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPD 384

Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
           LVSW S+I G AQ+G   +AL+ F  + +   + D +TF+ V++ACTHAGLV++G ++F 
Sbjct: 385 LVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444

Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------ 659
            +  +H +  T +HY+C+VDL +R+G  E+   +I+ MP   S  +W +VL  C      
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504

Query: 660 --------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
                    L  ++P +   YV ++N+YAA G W+E  ++RK M +  V K  G SW E+
Sbjct: 505 DLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564

Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
           K K + F+A D SHP  NQI   L EL  ++K+ GY P TS VL D++DE KE  L  HS
Sbjct: 565 KRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHS 624

Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
           E+LA+AF +++T  G  +++ KNLR C DCH  IK IS + +R I VRD+ RFH F+ G 
Sbjct: 625 EKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQ 684

Query: 832 CSCGDYW 838
           CSCGDYW
Sbjct: 685 CSCGDYW 691



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 123/525 (23%), Positives = 232/525 (44%), Gaps = 69/525 (13%)

Query: 31  DQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG--IRRLGLPLFG-------STL 81
           D+  F+ + +   V   RL    CR +   EA+++  G  + R  + L G       ST 
Sbjct: 33  DKKFFNPNHEDGGVVVERL----CRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTY 88

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV------ 135
            ++++ C        G++VH     SGF   + +   L+ +Y +  ++ D R+V      
Sbjct: 89  CNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN 148

Query: 136 -------------------------FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
                                    FD+M E +  SWT++++GY +    +  L L+  M
Sbjct: 149 RDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLM 208

Query: 171 Q-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           Q V   +PN FT S  +   A    +    ++H  +++ G +    + ++L+ MY K   
Sbjct: 209 QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGC 268

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           + +AR +FD + ++D ++W SM+  Y  +    E F  F+ +  +       TF  V+  
Sbjct: 269 IDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNA 328

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           CA      L +Q+H  + + G D      + L+  Y+KCG +E A  +     +  D+VS
Sbjct: 329 CADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK-PDLVS 387

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY 409
           WT++I G  QNG  D A+ +F  + + G +P+  T+  +L+A         HA +++   
Sbjct: 388 WTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA-------CTHAGLVEKGL 440

Query: 410 EKSFSVG------------TALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQ 456
           E  +S+             T L++   + G  ++   V  E+  +     W+++L G + 
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500

Query: 457 IGDTEGAVKIYRQLTSEGVKP-NEFTFSSVINACTAPSAAVEQGK 500
            G+ + A +  ++L    ++P N  T+ ++ N   A     E+GK
Sbjct: 501 YGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGK 543


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/583 (38%), Positives = 338/583 (57%), Gaps = 25/583 (4%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID--FDHNIRTGLMVAYSKCGKMEDAS 335
           L+ ++  S+++   +T+  RL R  H+Q++K  +D      I   L+  YSK  +   A 
Sbjct: 4   LSPNSLASLVESAVSTQCSRLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQ 62

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            + S+    + VV+WTA+I+G +QNG    A+  F  M R+ ++PN FT+     A  ++
Sbjct: 63  LLLSLTPN-RSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121

Query: 396 -SPF---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
            SP    QVHA  +K        VG +  + Y K G+ +EA K+F+ + E++I  W+A L
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +     G  + A+  + +   EG++P +F  SSV++AC   S  +E GK  H  ++KA +
Sbjct: 182 SNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSV-LEVGKSVHTLAVKACV 240

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
              + V SALV MY K G+IE A   F    +R+LV+WN+MI GYA  G    A+ +F E
Sbjct: 241 VGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDE 300

Query: 572 MR--RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           M      +  + +TF+ V++AC+ AG V+ G + F+ M   + I P  EHY+C+VDL  R
Sbjct: 301 MTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGR 360

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AGM+E+A   I +MP   + +VW  +L A +              L  L P DS  +VLL
Sbjct: 361 AGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLL 420

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SNM+AA G W+E   VRK M D  +KK AG SWI   N  + F A D SH ++++I + L
Sbjct: 421 SNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAML 480

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNL 795
            +L   ++ AGY PDTS+ L D+++E K   +  HSE++A+AFGL++ PAG P++I KNL
Sbjct: 481 AKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNL 540

Query: 796 RVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+CGDCH+ IK IS +  R+I+VRD N FH F++  CSC DYW
Sbjct: 541 RICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 178/385 (46%), Gaps = 39/385 (10%)

Query: 202 HTMVIKNGGEVVTS-VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           H  +IK     + S + N L++MY K      A+ +     +R  +TW +++AG V N  
Sbjct: 29  HAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGR 88

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
              A   F+NM     +    TF    K   + +   + +Q+H+  +K G   D  +   
Sbjct: 89  FTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCS 148

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
               YSK G  E+A K+F  M E +++ +W A +S  +  G  D A+  F +  +EG+ P
Sbjct: 149 AFDMYSKAGLTEEARKMFDEMPE-RNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEP 207

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             F  S +L+A   +S  +    VH   +K     +  VG+AL++ Y K G +++A + F
Sbjct: 208 TDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAF 267

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT--SEGVKPNEFTFSSVINACTAPSA 494
           + + E+++V W+AM+ GYA  G  + AV ++ ++T  S  V PN  TF  V++AC+   +
Sbjct: 268 DEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGS 327

Query: 495 ---------------AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
                           +E G + +AC               +V +  + G +E A +  K
Sbjct: 328 VNVGMEIFESMRGRYGIEPGAEHYAC---------------VVDLLGRAGMVEQAYQFIK 372

Query: 540 RQRKRDLVS-WNSMICGYAQHGHTK 563
           +   R  VS W +++      G ++
Sbjct: 373 KMPIRPTVSVWGALLGASKMFGKSE 397



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 150/348 (43%), Gaps = 8/348 (2%)

Query: 27  YSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
           YSK D     Q L   +P R+ V +  L+    ++     AL  F  +RR  +     T 
Sbjct: 52  YSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTF 111

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
               K  G L   + G+QVH   VK+G   DV V  S  D+Y +    E+ R++FD+M E
Sbjct: 112 PCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPE 171

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            N+ +W + LS        D  L  F   + EGI+P  F  S+VL   A   ++     V
Sbjct: 172 RNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSV 231

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           HT+ +K        V +AL+ MY K   + DA   FD M +R+ +TWN+M+ GY      
Sbjct: 232 HTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQA 291

Query: 262 MEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIR 318
             A   F+ M      +  +  TFV V+  C+    + +  ++  S   + GI+      
Sbjct: 292 DMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHY 351

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
             ++    + G +E A +    M     V  W A++      G  +L 
Sbjct: 352 ACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELG 399



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 168/375 (44%), Gaps = 10/375 (2%)

Query: 96  FGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            GR  H + +K+        +   LV++Y + +     + +       +VV+WT+L++G 
Sbjct: 24  LGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGS 83

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            +N      L  F  M+ + I+PN FTF                 QVH + +K G     
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  +   MY K+ +  +AR +FD M +R+  TWN+ ++  V    + +A   F      
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKE 203

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G E T     SV+  CA    L + + +H+  +K  +  +  + + L+  Y KCG +EDA
Sbjct: 204 GIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 263

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT--REGVRPNGFTYSIILTAQ 392
            + F  M E +++V+W AMI G+   G  D+AV  F +MT     V PN  T+  +L+A 
Sbjct: 264 ERAFDEMPE-RNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSAC 322

Query: 393 PAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA- 446
                  V   I ++       E        +++   + G++++A +  + +  +  V+ 
Sbjct: 323 SRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSV 382

Query: 447 WSAMLAGYAQIGDTE 461
           W A+L      G +E
Sbjct: 383 WGALLGASKMFGKSE 397


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 238/645 (36%), Positives = 364/645 (56%), Gaps = 33/645 (5%)

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
            S+   +IS Y +S  + DA  +FD M  RD ++WNSM++G V       A + F+ M  
Sbjct: 66  VSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEM-- 123

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
              E +  ++ +++  C     +  A +L  Q+    I         ++  Y + GK++D
Sbjct: 124 --PERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDI----AAWNAMVHGYLQFGKVDD 177

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K+F  M   K+V+SWT MI G  QN     A+N F  M R  ++    T++ ++TA  
Sbjct: 178 ALKLFKQMPR-KNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACA 236

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWS 448
               F    QVH  IIK+ +     V  +L+  Y      +++ KVF E++ EK +  W+
Sbjct: 237 NAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEK-VAVWT 295

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
           A+L+GY+     E A+ ++ ++    + PN+ TF+S +N+C+A    ++ GK+ H  ++K
Sbjct: 296 ALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSAL-GTLDWGKEIHGVAVK 354

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
             L     V ++LV MYS  GN+  A  VF    K+ +VSWNS+I G AQHG  K A  +
Sbjct: 355 LGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414

Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ-YFDIMVNEHHIYPTMEHYSCMVDLY 627
           F +M R + E D ITF G+++AC+H G + +G++ ++ I    +HI   ++HY+CMVD+ 
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDIL 474

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYV 673
            R G L++A  +I  M    +  VW  +L+ACR+               +L    SA YV
Sbjct: 475 GRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LLSN+YA+ G W   +++R  M  + + K+ G SW+ ++ K + F +GD   P   +I+ 
Sbjct: 535 LLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGD--RPHCLRIFE 592

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           KLE L  +LK+ GY PD    L D++DE KE +L  HSERLAIAFGL+ T  G+ + ++K
Sbjct: 593 KLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMK 652

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLRVC DCHTVIKLIS++    IV+RD  RFHHFK G+CSCGDYW
Sbjct: 653 NLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 213/457 (46%), Gaps = 45/457 (9%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           L+  ++    +++ R VFD +   +V  +T ++SGY R+      L LF  M +  +   
Sbjct: 41  LICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDV--- 97

Query: 179 SFTFSTVLGVLADEGIVATAVQ----------VHTMVIKNG----GEV------------ 212
             ++++++    + G + TAV+          V    + NG    G V            
Sbjct: 98  -VSWNSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPV 156

Query: 213 -VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
              +  NA++  YL+   V DA  +F  M  ++ I+W +M+ G   NE   EA   F NM
Sbjct: 157 KDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNM 216

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
                + T  TF  VI  CA      +  Q+H  ++K+G  ++  +   L+  Y+ C + 
Sbjct: 217 LRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRT 276

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           ED+ K+F  M   K V  WTA++SG+  N   + A+N F +M R  + PN  T++  L +
Sbjct: 277 EDSRKVFGEMVHEK-VAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNS 335

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             A+       ++H   +K        VG +L+  Y   G +++A  VF  I +K IV+W
Sbjct: 336 CSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSW 395

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS- 506
           ++++ G AQ G  + A  I+ Q+     +P+E TF+ +++AC+      +  K F+  S 
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISS 455

Query: 507 ----IKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
               I  K+ +  C    +V +  + G ++ A ++ +
Sbjct: 456 GLNHIDRKIQHYTC----MVDILGRCGELKEAEKLIE 488



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/548 (24%), Positives = 240/548 (43%), Gaps = 72/548 (13%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
           + +FD+ P  +   Y +++  Y R +   +ALNLF  +    +  + S +S  ++ CG  
Sbjct: 55  REVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVE-CGDI 113

Query: 90  ----CLFDHVFGRQVHC------ECVKSGFA------------RDVNVSTSLVDLYMRTN 127
                +FD +  R V         C + G              +D+    ++V  Y++  
Sbjct: 114 DTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQFG 173

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
            V+D  ++F  M   NV+SWT+++ G  +N+ +   L LF  M    IK  S TF+ V+ 
Sbjct: 174 KVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVIT 233

Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
             A+        QVH  +IK+G      V  +LI++Y   K   D+R VF  M       
Sbjct: 234 ACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAV 293

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           W ++++GY  N  H +A   F+ M        +STF S +  C+    L   +++H   +
Sbjct: 294 WTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAV 353

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           K G+     +   L+V YS  G + DA  +F  + + K +VSW ++I G  Q+G    A 
Sbjct: 354 KLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFK-KSIVSWNSIIVGCAQHGRGKWAF 412

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
             F QM R    P+  T+                               T LL+A    G
Sbjct: 413 VIFGQMIRLNKEPDEITF-------------------------------TGLLSACSHCG 441

Query: 428 ILDEAAKVFELID------EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
            L +  K+F  I       ++ I  ++ M+    + G+ + A K+   +    VKPNE  
Sbjct: 442 FLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMV---VKPNEMV 498

Query: 482 FSSVINACTAPSAAVEQGKQFHAC--SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
           + ++++AC   S  V++G++  A   ++ +K + A  +   L  +Y+  G   S S++  
Sbjct: 499 WLALLSACRMHS-DVDRGEKAAAAIFNLDSKSSAAYVL---LSNIYASAGRWSSVSKLRV 554

Query: 540 RQRKRDLV 547
           + +++ ++
Sbjct: 555 KMKQKGIM 562



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 145/312 (46%), Gaps = 54/312 (17%)

Query: 402 AHIIKTNYEKSFSVGT------ALLNAYVKKGILDEAAKVFE------------------ 437
           +H+I     +S+SV         L+  ++    LDEA +VF+                  
Sbjct: 18  SHVIHGKSFRSYSVTVEFQNREVLICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYT 77

Query: 438 ----------LIDE---KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
                     L DE   +D+V+W++M++G  + GD + AVK++ ++    V     ++++
Sbjct: 78  RSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSV----VSWTA 133

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           ++N C      V+Q ++   C +  K    +   +A+V  Y + G ++ A ++FK+  ++
Sbjct: 134 MVNGCFR-FGMVDQAERLF-CQMPVK---DIAAWNAMVHGYLQFGKVDDALKLFKQMPRK 188

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           +++SW +MICG  Q+  + +AL +FK M R  ++    TF  VITAC +A     G Q  
Sbjct: 189 NVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVH 248

Query: 605 DIMVNEHHIYPTMEHY--SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLI 662
             ++    +Y   E Y  + ++ LY+     E +  +   M     A VW  +L+   L 
Sbjct: 249 GFIIKSGFLY---EEYVTASLITLYANCKRTEDSRKVFGEMVHEKVA-VWTALLSGYSLN 304

Query: 663 SLQPHDSAIYVL 674
             + H+ A+ V 
Sbjct: 305 --RKHEDALNVF 314



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 80/168 (47%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           ++  + +F          +  LL  Y  +  H++ALN+F  + R  +    ST +S L +
Sbjct: 276 TEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNS 335

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  L    +G+++H   VK G      V  SLV +Y  + NV D   VF ++ + ++VSW
Sbjct: 336 CSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSW 395

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
            S++ G A++        +F +M     +P+  TF+ +L   +  G +
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443


>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
          Length = 653

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/570 (38%), Positives = 326/570 (57%), Gaps = 29/570 (5%)

Query: 296 LRLARQLHSQVLKNGI---DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           L L  QLH+Q +  G    D    + T ++  Y+ C + + A K+F  M   ++ V+W A
Sbjct: 86  LGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPR-RNAVTWNA 144

Query: 353 MISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTA--------QPAVSPFQVHA 402
           +I G+ Q G  + A+  F  M REG  V P+ +T+  +L+         +       +HA
Sbjct: 145 LIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHA 204

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           H+IK   E+   VG +L++ Y  +  L++A   F+ +   D + WS+M++ Y    + EG
Sbjct: 205 HVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEG 264

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ I+  +  + +KP +F +S+V + C      +E GKQ HA S+K+       + +AL+
Sbjct: 265 ALLIFFNMLCQDIKPTQFVYSTVFSVC-GRMGILEMGKQVHAHSLKSNTEKDAAMFNALL 323

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           TMYS  G I  A +VF      +++S+NSMI    QHG+ K+ALE F++M+   L  D +
Sbjct: 324 TMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEV 383

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           T + +I++  HAGLV EG Q F+ MV+   I P  +HY+C+VD+ +R+G + KAM  IN 
Sbjct: 384 TLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINE 443

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MPF A A +WR VL AC               L  ++P+++  Y+LL N+YA  G W E 
Sbjct: 444 MPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEA 503

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
            +VR LM +R V K+  +SWIE+  +TY F   D SHP S +IY  L+ L + +K AGY 
Sbjct: 504 EKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYV 563

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
           PD S+   +I  + KE  L  H E+LA AFG +A P+G  L+I+KNLRVCGDCH   K  
Sbjct: 564 PDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYF 623

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           S +  R+I++RD  RFHHF  G CSCGDYW
Sbjct: 624 SLVTGREIILRDNQRFHHFNSGFCSCGDYW 653



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 10/298 (3%)

Query: 96  FGRQVHCECVKSGF--ARDVNV-STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            G Q+H + V  GF    D  + +T+++  Y      +  R+VFD M   N V+W +L+ 
Sbjct: 88  LGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIK 147

Query: 153 GYARNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQV----HTMVI 206
           GYA+    +  + LF  M+ EG  + P+ +TF  +L  +  EG     +++    H  VI
Sbjct: 148 GYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVI 207

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G E    V  +L+S+Y   + + DA+  FD +   D I W+SM++ YV  E    A  
Sbjct: 208 KAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALL 267

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F NM     + T+  + +V  +C     L + +Q+H+  LK+  + D  +   L+  YS
Sbjct: 268 IFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYS 327

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
            CG + DA K+FS   +  +V+S+ +MIS   Q+G    A+  F QM   G+ P+  T
Sbjct: 328 DCGCINDAQKVFS-SNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVT 384



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 134/273 (49%), Gaps = 9/273 (3%)

Query: 21  SLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL---- 76
           S R P  ++K   +FD  P+RN V +N L+  Y +    +EA+ LF  ++R G  +    
Sbjct: 120 SCREPDLARK---VFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDR 176

Query: 77  --FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR 134
             F + LS + +  G       G  +H   +K+G  RD  V  SLV LY     +ED + 
Sbjct: 177 YTFPALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKV 236

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
            FD +  S+ + W+S++S Y   +  +  L +F  M  + IKP  F +STV  V    GI
Sbjct: 237 AFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGI 296

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +    QVH   +K+  E   ++ NAL++MY     + DA+ VF   +  + I++NSM++ 
Sbjct: 297 LEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISA 356

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
              +    EA E F  M  AG      T +++I
Sbjct: 357 LGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLI 389



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/324 (20%), Positives = 131/324 (40%), Gaps = 40/324 (12%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD+    + + ++ ++  Y      + AL +F  +    +       S+V   CG +   
Sbjct: 238 FDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGIL 297

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+QVH   +KS   +D  +  +L+ +Y     + D ++VF   +  NV+S+ S++S  
Sbjct: 298 EMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISAL 357

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            ++      LE F +M+  G+ P+  T   ++      G+V   +Q+             
Sbjct: 358 GQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMF------------ 405

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL- 273
              N+++ +     M +    V D +     I                +A +T N M   
Sbjct: 406 ---NSMVDIEGIKPMYQHYACVVDMLARSGEIG---------------KAMKTINEMPFE 447

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           A A L R     V+  C+  +++   +++ +++L     ++      L   Y++ G+  +
Sbjct: 448 AEAPLWR----IVLGACSKHRDIETGKRI-AEMLFEMEPYEATNYILLGNIYARLGRWTE 502

Query: 334 ASKIFSMMREM----KDVVSWTAM 353
           A K+ S+M E      D  SW  M
Sbjct: 503 AEKVRSLMGERGVYKDDAFSWIEM 526


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/579 (38%), Positives = 343/579 (59%), Gaps = 31/579 (5%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGI-----DFDHNIRTGLMVAYSKCGKMEDASKIF 338
           +S+++LC +++     +Q+H+  +++G+     DF+ ++   L+   S    M  A++IF
Sbjct: 38  ISLVQLCGSSQSK--LKQIHAFSIRHGVPPQNPDFNKHLIFALV---SLSAPMSFAAQIF 92

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSP 397
           + + +  ++ +W  MI G  ++     AV  F QM     + P+  T+  +  A   +  
Sbjct: 93  NQI-QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMD 151

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                 +H+ +++  ++    V  +L++ Y   G L  A +VFE++  +D VAW++++ G
Sbjct: 152 VSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVING 211

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +A  G    A+ +YR++ SEGV+P+ FT  S+++AC     A+  G++ H   +K  L  
Sbjct: 212 FALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVE-LGALALGERVHMYMVKVGLVQ 270

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
               S+AL+ +YSK GN   A +VF    +R +VSW S+I G A +G   +AL++F E+ 
Sbjct: 271 NQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELE 330

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           RQ L+   ITF+GV+ AC+H G++DEG  YF  M  E+ I P +EH+ CMVDL  RAG +
Sbjct: 331 RQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKV 390

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
             A D I  MP   +A +WRT+L AC               +  L+   S  +VLLSN+Y
Sbjct: 391 GDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLY 450

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A+   W +   VRK+M  + VKK  GYS +E+KN+ Y F+ GD SHPQS + Y+ L +++
Sbjct: 451 ASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKIT 510

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             LK  GY P T  VL DI++E KE  LS H+E++AIAF LV TP G P++I+KNLRVC 
Sbjct: 511 QLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCA 570

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH  IKLISK+  R+I+VRD +RFHHFK+G CSC DYW
Sbjct: 571 DCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 191/393 (48%), Gaps = 15/393 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCN-----ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           Q+H   I++G        N     AL+S+   S  +  A  +F+ ++  +  TWN+M+ G
Sbjct: 53  QIHAFSIRHGVPPQNPDFNKHLIFALVSL---SAPMSFAAQIFNQIQAPNIFTWNTMIRG 109

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           +  +E    A E F+ M  A + L  + TF  + K  A   ++ L   +HS V++NG D 
Sbjct: 110 FAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDS 169

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
              ++  L+  YS  G +  A ++F +M   +D V+W ++I+G   NG  + A+  + +M
Sbjct: 170 LRFVQNSLVHMYSVLGSLXSAYQVFEIM-SYRDRVAWNSVINGFALNGMPNEALTLYREM 228

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EGV P+GFT   +L+A   +       +VH +++K    ++     ALL+ Y K G  
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNF 288

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            +A KVF+ ++E+ +V+W++++ G A  G    A+K++ +L  +G+KP+E TF  V+ AC
Sbjct: 289 RDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVS 548
           +      E    F     +  +   +     +V +  + G +  A +  +      + V 
Sbjct: 349 SHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVI 408

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           W +++     HGH +       E++R +    G
Sbjct: 409 WRTLLGACTIHGHLELGEVARAEIQRLEQRHSG 441



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 139/259 (53%), Gaps = 2/259 (0%)

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADE 192
           ++F+ +   N+ +W +++ G+A ++     +ELF +M     I P++ TF  +   +A  
Sbjct: 90  QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             V+    +H++V++NG + +  V N+L+ MY     +  A  VF+ M  RD + WNS++
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVI 209

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            G+  N +  EA   +  MG  G E    T VS++  C     L L  ++H  ++K G+ 
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLV 269

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            + +    L+  YSKCG   DA K+F  M E + VVSWT++I G   NG  + A+  F +
Sbjct: 270 QNQHASNALLDLYSKCGNFRDAQKVFDEMEE-RSVVSWTSLIVGLAVNGLGNEALKLFGE 328

Query: 373 MTREGVRPNGFTYSIILTA 391
           + R+G++P+  T+  +L A
Sbjct: 329 LERQGLKPSEITFVGVLYA 347



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 28/301 (9%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   + K    L D   G  +H   V++GF     V  SLV +Y    ++    +VF+ M
Sbjct: 138 TFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIM 197

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +  + V+W S+++G+A N M +  L L+  M  EG++P+ FT  ++L    + G +A   
Sbjct: 198 SYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGE 257

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           +VH  ++K G        NAL+ +Y K    RDA+ VFD ME+R  ++W S++ G   N 
Sbjct: 258 RVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNG 317

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  EA + F  +   G + +  TFV V+  C+           H  +L  G ++   ++ 
Sbjct: 318 LGNEALKLFGELERQGLKPSEITFVGVLYACS-----------HCGMLDEGFNYFRRMKE 366

Query: 320 -----------GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAM-----ISGHLQNGA 362
                      G MV    + GK+ DA      M    + V W  +     I GHL+ G 
Sbjct: 367 EYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGE 426

Query: 363 I 363
           +
Sbjct: 427 V 427


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/700 (32%), Positives = 396/700 (56%), Gaps = 24/700 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LF + P  N V +N ++  + +    +EA++ FL +++ GL    S+L SVL     L
Sbjct: 263 RKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASL 322

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +G  VH + +K G   +V V ++LV++Y + + ++  ++VF+ + E N+V W ++L
Sbjct: 323 SMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAML 382

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G+A+N +   V+E F  M+  G +P+ FTF+++    A    +    Q+HT++IKN   
Sbjct: 383 GGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFT 442

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V NAL+ MY KS  +++AR  F+ M+  D+++WN+++ GYV  E + EAF  F  M
Sbjct: 443 SNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRM 502

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G      +  S++  CA  KE +  +Q H  ++K G+D      + L+  Y KCG +
Sbjct: 503 VSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVV 562

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             A  +F  M   ++VVS  A+I+G+  +  ++ A++ F ++   G++P   T++ +L  
Sbjct: 563 LAARDVFYSM-PYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDG 620

Query: 392 QPAVSPF----QVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
                      Q+H  ++K  +   S  V  +LL  Y+      ++  +F EL   K +V
Sbjct: 621 CDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLV 680

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
            W+A+++GYAQ    E A++ Y+ + S+ + P++ TF+SV+ AC   S +++ G++ H+ 
Sbjct: 681 VWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMS-SLQTGQEVHSL 739

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD-LVSWNSMICGYAQHGHTKK 564
                 N      S+L+ MY+K G+++ + +VF    +R+ ++SWNSMI G A++G+ ++
Sbjct: 740 IFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEE 799

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           ALE+FK+M +Q +  D +TF+GV++AC+HAG V EG++ FD+MVN + + P ++H  CMV
Sbjct: 800 ALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMV 859

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSA 670
           D+  R G L +A + IN++   A   +W T+L ACR              L+ L+P  S+
Sbjct: 860 DILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSSS 919

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
            YVLLS +YA + +W     +R+ M  + VKK  GYSWIE
Sbjct: 920 SYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWIE 959



 Score =  282 bits (721), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 169/575 (29%), Positives = 288/575 (50%), Gaps = 42/575 (7%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           Q  F R  +++   +N +L  Y    L    +  F+ +   G+     T + VL  C  L
Sbjct: 96  QKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGL 155

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  +G+QVHC   K GF         L+D+Y +  N+ D R VFD     + VSWT+L+
Sbjct: 156 QDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLI 215

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GY R+      +++F +MQ  G  P+     TV                          
Sbjct: 216 AGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTV-------------------------- 249

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                    I+ Y+    + DAR +F  + + + + WN M++G+       EA   F  +
Sbjct: 250 ---------INAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLEL 300

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G + TRS+  SV+   A+   L     +H+Q +K G+D +  + + L+  Y+KC KM
Sbjct: 301 KKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKM 360

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           + A ++F+ + E +++V W AM+ G  QNG     + FF  M R G +P+ FT++ I +A
Sbjct: 361 DAAKQVFNSLGE-RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSA 419

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             ++       Q+H  +IK  +  +  V  AL++ Y K G L EA K FE +   D V+W
Sbjct: 420 CASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSW 479

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           +A++ GY Q    + A  ++R++ S GV P+E + +S+++AC A     +QG+Q H   +
Sbjct: 480 NAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC-ANVKEFKQGQQCHCLLV 538

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           K  L+ + C  S+L+ MY K G + +A +VF     R++VS N++I GY    H ++A+ 
Sbjct: 539 KVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTM-SHLEEAIH 597

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           +F+E++   L+   +TF G++  C  A +++ G+Q
Sbjct: 598 LFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQ 632



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 166/552 (30%), Positives = 283/552 (51%), Gaps = 42/552 (7%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H + +K G      +   +VDLY++  NV+  ++ F  + + +V +W S+LS Y  +
Sbjct: 61  KVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDH 120

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
            +   V++ F  M   G++PN FTF+ VL   +    +    QVH  V K G    +   
Sbjct: 121 GLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQ 180

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
             LI MY K + +RDAR VFDG  + D+++W +++AGYV +   MEA + F+ M   G  
Sbjct: 181 GGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHV 240

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
             +   V+VI                                    AY   G++ DA K+
Sbjct: 241 PDQIALVTVIN-----------------------------------AYVALGRLADARKL 265

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F+ +    +VV+W  MISGH + G  + A++FF ++ + G++    +   +L+A  ++S 
Sbjct: 266 FTQIPN-PNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSM 324

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                 VHA  IK   + +  VG+AL+N Y K   +D A +VF  + E++IV W+AML G
Sbjct: 325 LNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGG 384

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +AQ G  +  ++ +  +   G +P+EFTF+S+ +AC A    ++ G Q H   IK K  +
Sbjct: 385 FAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSAC-ASLHYLDFGGQLHTVMIKNKFTS 443

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            L V++ALV MY+K G ++ A + F+  +  D VSWN++I GY Q  +  +A  +F+ M 
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
              +  D ++   +++AC +     +GQQ   ++V       T    S ++D+Y + G++
Sbjct: 504 SNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAG-SSLIDMYVKCGVV 562

Query: 634 EKAMDIINRMPF 645
             A D+   MP+
Sbjct: 563 LAARDVFYSMPY 574



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 166/633 (26%), Positives = 309/633 (48%), Gaps = 49/633 (7%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD +   + V +  L+  Y RD    EA+ +F  ++R+G                    
Sbjct: 199 VFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVG-------------------- 238

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           HV                D     ++++ Y+    + D R++F  +   NVV+W  ++SG
Sbjct: 239 HV---------------PDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISG 283

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +A+    +  +  F  ++  G+K    +  +VL  +A   ++     VH   IK G +  
Sbjct: 284 HAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDN 343

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V +AL++MY K   +  A+ VF+ + +R+ + WN+M+ G+  N L  E  E F+ M  
Sbjct: 344 VYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKR 403

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G +    TF S+   CA+   L    QLH+ ++KN    +  +   L+  Y+K G +++
Sbjct: 404 HGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKE 463

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A K F  M+ + D VSW A+I G++Q    D A   F +M   GV P+  + + I++A  
Sbjct: 464 ARKQFEFMK-IHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACA 522

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            V  F    Q H  ++K   + S   G++L++ YVK G++  A  VF  +  +++V+ +A
Sbjct: 523 NVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINA 582

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK- 508
           ++AGY  +   E A+ +++++   G+KP E TF+ +++ C   +  +  G+Q H   +K 
Sbjct: 583 LIAGYT-MSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDG-AFMLNLGRQIHGQVMKW 640

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALE 567
             L+++  V  +L+ MY        +  +F   Q  + LV W ++I GYAQ  H +KAL+
Sbjct: 641 GFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQ 700

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC--MVD 625
            ++ MR  ++  D  TF  V+ AC     +  GQ+   ++    H    M+  +C  ++D
Sbjct: 701 FYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIF---HTGFNMDEITCSSLID 757

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +Y++ G ++ ++ + + MP   S   W +++  
Sbjct: 758 MYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVG 790



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 227/442 (51%), Gaps = 34/442 (7%)

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           ++TA  +H+  +K G  +   + N ++ +Y+K   V  A+  F  +E +D   WNS+++ 
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
           Y+ + L     ++F  M   G      TF  V+  C+  +++   +Q+H  V K G  F 
Sbjct: 117 YLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFR 176

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
              + GL+  Y+KC  + DA  +F     + D VSWT +I+G++++G    AV  F +M 
Sbjct: 177 SFCQGGLIDMYAKCRNLRDARLVFDGALNL-DTVSWTTLIAGYVRDGFPMEAVKVFDKMQ 235

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           R G  P+          Q A+                       ++NAYV  G L +A K
Sbjct: 236 RVGHVPD----------QIAL---------------------VTVINAYVALGRLADARK 264

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F  I   ++VAW+ M++G+A+ G  E A+  + +L   G+K    +  SV++A  A  +
Sbjct: 265 LFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSA-IASLS 323

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
            +  G   HA +IK  L++ + V SALV MY+K   +++A +VF    +R++V WN+M+ 
Sbjct: 324 MLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
           G+AQ+G  ++ +E F  M+R   + D  TF  + +AC     +D G Q   +M+ ++   
Sbjct: 384 GFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMI-KNKFT 442

Query: 615 PTMEHYSCMVDLYSRAGMLEKA 636
             +   + +VD+Y+++G L++A
Sbjct: 443 SNLFVANALVDMYAKSGALKEA 464



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 56/108 (51%)

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A+   K  H+ S+K  +     + + +V +Y K GN++ A + F R  K+D+ +WNS++ 
Sbjct: 56  ALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLS 115

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
            Y  HG     ++ F  M    +  +  TF  V++AC+    ++ G+Q
Sbjct: 116 MYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQ 163


>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
           Japonica Group]
 gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 654

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/570 (38%), Positives = 326/570 (57%), Gaps = 29/570 (5%)

Query: 296 LRLARQLHSQVLKNGI---DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
           L L  QLH+Q +  G    D    + T ++  Y+ C + + A K+F  M   ++ V+W A
Sbjct: 87  LGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPR-RNAVTWNA 145

Query: 353 MISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTA--------QPAVSPFQVHA 402
           +I G+ Q G  + A+  F  M REG  V P+ +T+  +L+         +       +HA
Sbjct: 146 LIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHA 205

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           H+IK   E+   VG +L++ Y  +  L++A   F+ +   D + WS+M++ Y    + EG
Sbjct: 206 HVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEG 265

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           A+ I+  +  + +KP +F +S+V + C      +E GKQ HA S+K+       + +AL+
Sbjct: 266 ALLIFFNMLCQDIKPTQFVYSTVFSVC-GRMGILEMGKQVHAHSLKSNTEKDAAMFNALL 324

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
           TMYS  G I  A +VF      +++S+NSMI    QHG+ K+ALE F++M+   L  D +
Sbjct: 325 TMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEV 384

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           T + +I++  HAGLV EG Q F+ MV+   I P  +HY+C+VD+ +R+G + KAM  IN 
Sbjct: 385 TLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINE 444

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MPF A A +WR VL AC               L  ++P+++  Y+LL N+YA  G W E 
Sbjct: 445 MPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEA 504

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
            +VR LM +R V K+  +SWIE+  +TY F   D SHP S +IY  L+ L + +K AGY 
Sbjct: 505 EKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYV 564

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
           PD S+   +I  + KE  L  H E+LA AFG +A P+G  L+I+KNLRVCGDCH   K  
Sbjct: 565 PDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYF 624

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           S +  R+I++RD  RFHHF  G CSCGDYW
Sbjct: 625 SLVTGREIILRDNQRFHHFNSGFCSCGDYW 654



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 149/298 (50%), Gaps = 10/298 (3%)

Query: 96  FGRQVHCECVKSGF--ARDVNV-STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            G Q+H + V  GF    D  + +T+++  Y      +  R+VFD M   N V+W +L+ 
Sbjct: 89  LGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIK 148

Query: 153 GYARNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQV----HTMVI 206
           GYA+    +  + LF  M+ EG  + P+ +TF  +L  +  EG     +++    H  VI
Sbjct: 149 GYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVI 208

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           K G E    V  +L+S+Y   + + DA+  FD +   D I W+SM++ YV  E    A  
Sbjct: 209 KAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALL 268

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F NM     + T+  + +V  +C     L + +Q+H+  LK+  + D  +   L+  YS
Sbjct: 269 IFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYS 328

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
            CG + DA K+FS   +  +V+S+ +MIS   Q+G    A+  F QM   G+ P+  T
Sbjct: 329 DCGCINDAQKVFS-SNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVT 385



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 134/273 (49%), Gaps = 9/273 (3%)

Query: 21  SLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL---- 76
           S R P  ++K   +FD  P+RN V +N L+  Y +    +EA+ LF  ++R G  +    
Sbjct: 121 SCREPDLARK---VFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDR 177

Query: 77  --FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRR 134
             F + LS + +  G       G  +H   +K+G  RD  V  SLV LY     +ED + 
Sbjct: 178 YTFPALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTLEDAKV 237

Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
            FD +  S+ + W+S++S Y   +  +  L +F  M  + IKP  F +STV  V    GI
Sbjct: 238 AFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGI 297

Query: 195 VATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           +    QVH   +K+  E   ++ NAL++MY     + DA+ VF   +  + I++NSM++ 
Sbjct: 298 LEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISA 357

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
              +    EA E F  M  AG      T +++I
Sbjct: 358 LGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLI 390



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/324 (20%), Positives = 131/324 (40%), Gaps = 40/324 (12%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           FD+    + + ++ ++  Y      + AL +F  +    +       S+V   CG +   
Sbjct: 239 FDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGIL 298

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G+QVH   +KS   +D  +  +L+ +Y     + D ++VF   +  NV+S+ S++S  
Sbjct: 299 EMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISAL 358

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
            ++      LE F +M+  G+ P+  T   ++      G+V   +Q+             
Sbjct: 359 GQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMF------------ 406

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL- 273
              N+++ +     M +    V D +     I                +A +T N M   
Sbjct: 407 ---NSMVDIEGIKPMYQHYACVVDMLARSGEIG---------------KAMKTINEMPFE 448

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           A A L R     V+  C+  +++   +++ +++L     ++      L   Y++ G+  +
Sbjct: 449 AEAPLWR----IVLGACSKHRDIETGKRI-AEMLFEMEPYEATNYILLGNIYARLGRWTE 503

Query: 334 ASKIFSMMREM----KDVVSWTAM 353
           A K+ S+M E      D  SW  M
Sbjct: 504 AEKVRSLMGERGVYKDDAFSWIEM 527


>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
 gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
          Length = 719

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/709 (33%), Positives = 376/709 (53%), Gaps = 61/709 (8%)

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T+ +S  + NK    +  LF       I P + T +  + ++     +    Q+H  +I 
Sbjct: 54  TTTISKTSENKPKSSLSALF-------IPPTTPTEAHFISLIHGSKTILQLHQIHAQIII 106

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +     + +   LIS     K +  + AVF+  + ++  T+N+++ G  TN     A   
Sbjct: 107 HNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFH 166

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  M  +G +  R T+  V+K  A      L   +H  +L+ GI+ D  +R  L+  Y K
Sbjct: 167 FRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVK 226

Query: 328 CGKMEDASKIFSMMREMKDVVS----WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
             K+  A K+F    E  D  S    W  +I G  + G++  AV  F  M +        
Sbjct: 227 VEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPK-------- 278

Query: 384 TYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
                                 K N   S      L++ + K G +D A ++F+ + EK+
Sbjct: 279 ----------------------KENVSWS-----TLIDGFAKNGDMDRAMELFDQMPEKN 311

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+ M+ G+++ GD+E A+ ++ ++  EGV+PN FT  S ++AC A    +E G + H
Sbjct: 312 VVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSAC-AKIGGLEAGLRIH 370

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
                  L+    + +ALV MY+K GNIESASEVF    ++ + +W  MI G+A HGH++
Sbjct: 371 KYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSE 430

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
           +A+  FK+M    ++ D + F+ ++TAC H+G VD G  +FD M  ++ I P+M+HY+ +
Sbjct: 431 QAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLI 490

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
           VD+  R+G L++A+  I RMP      +W  +  ACR              L+ L+P  +
Sbjct: 491 VDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHT 550

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             Y+ LSN YAA G W++  RVR LM +R V K +G+S IEV+ + + F++GD  H  S 
Sbjct: 551 GNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSK 610

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            I  KLEE+       GY P T +VL +++ E KE +L  H E+LA+AF L+ T  G  +
Sbjct: 611 AICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPGMTI 670

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +IVKNL+VCGDCH+++K  SK+ +R+I++RD  RFHHFK+G CSC D+W
Sbjct: 671 RIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 218/479 (45%), Gaps = 54/479 (11%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H + +    +    ++T L+       ++     VF+     N+ ++ +L+ G   N 
Sbjct: 99  QIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNS 158

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                +  F  M   GIKP+  T+  VL  +A        + +H M+++ G E+ + V  
Sbjct: 159 HFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRV 218

Query: 219 ALISMYLKSKMVRDARAVFDGMEDR-----DSITWNSMVAGYVTNELHMEAFETFNNMGL 273
           +L+ MY+K + +  A  VFD   +R      ++ WN ++ G                   
Sbjct: 219 SLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKG------------------- 259

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR-TGLMVAYSKCGKME 332
                           C     ++ A +L   + K       N+  + L+  ++K G M+
Sbjct: 260 ----------------CCKAGSMKKAVKLFKAMPKK-----ENVSWSTLIDGFAKNGDMD 298

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
            A ++F  M E K+VVSWT M+ G  +NG  + A++ F +M  EGVRPN FT    L+A 
Sbjct: 299 RAMELFDQMPE-KNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSAC 357

Query: 393 PAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
             +    +  ++H +I       + ++GTAL++ Y K G ++ A++VF   ++K I  W+
Sbjct: 358 AKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWT 417

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH-ACSI 507
            M+ G+A  G +E A+  ++Q+   G+KP+E  F +++ AC   S  V+ G  F  +  +
Sbjct: 418 VMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMH-SGQVDIGLNFFDSMRL 476

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKA 565
              +  ++   + +V M  + G ++ A    +R     D V W ++ C    H  TK A
Sbjct: 477 DYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMA 535



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/400 (22%), Positives = 154/400 (38%), Gaps = 90/400 (22%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           ++F+    +N   +N L+     +S    A+  F  + R G+     T   VLK+   LF
Sbjct: 134 AVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLF 193

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD-------------- 138
               G  +HC  ++ G   D  V  SLVD+Y++   +    +VFD+              
Sbjct: 194 STELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLW 253

Query: 139 ----------------------MNESNVVSWTSLLSGYARNKMNDRVLEL---------- 166
                                 M +   VSW++L+ G+A+N   DR +EL          
Sbjct: 254 NVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVV 313

Query: 167 ---------------------FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
                                F +M  EG++PN+FT  + L   A  G +   +++H  +
Sbjct: 314 SWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYI 373

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
             NG  +  ++  AL+ MY K   +  A  VF   E +   TW  M+ G+  +    +A 
Sbjct: 374 KDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAI 433

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
             F  M  AG +     F++++  C           +HS  +  G++F  ++R    +  
Sbjct: 434 ACFKQMMFAGIKPDEVVFLALLTAC-----------MHSGQVDIGLNFFDSMRLDYCIEP 482

Query: 326 S------------KCGKMEDASKIFSMMREMKDVVSWTAM 353
           S            + G++++A +    M    D V W A+
Sbjct: 483 SMKHYTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGAL 522


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/645 (33%), Positives = 360/645 (55%), Gaps = 20/645 (3%)

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E  T + N L+  Y + K + DA A F  + +++  ++  M+  Y  N+LH +A + F  
Sbjct: 14  EKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKK 73

Query: 271 MGLAGAELTRSTFVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
                 +  ++T+V+V+K CA   E  L   +++H   +  G   D  ++  L+  Y+KC
Sbjct: 74  SINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKC 133

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G  + A+ +F  M E K+++S+T+MI  +        A   + +M  EG+ P+ + Y+  
Sbjct: 134 GSFKFAAGVFEKM-EPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAA 192

Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSV-GTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
           L   P +   +   H+   N+E+   V   AL+  Y + G +  A  VF+ I  KD+ ++
Sbjct: 193 LAVCPTIREGEA-IHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASY 251

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           + M+A +A+  D   A+ +Y ++    ++PN +TF+SV++AC+   A  E GK+ H    
Sbjct: 252 NNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTE-GKEIHKKVK 310

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
                  +  ++ALV MY+K G+   A  VF     +++ +W S++  Y+Q G ++  LE
Sbjct: 311 GGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLE 370

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
            ++ M  + +  D +TF  +  AC+H+GL DEG  YF  M  +H I P   HY+CM+DL 
Sbjct: 371 AYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLL 430

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYV 673
            R G L +A +++  MP++     W  +L+AC              R+  L P DS  Y+
Sbjct: 431 GRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYL 490

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           L+ NMYA  G W + A V+K++  R + K  G S IE + + + F+ GD +HP + +I +
Sbjct: 491 LMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRA 550

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
           +L+E+  +L  AGY+PDT  VL D+++E K  +L  HSER+A+  GL+ + AGA L IVK
Sbjct: 551 RLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVK 610

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLR+C DCH+  KL+SK+  R ++VRD++RFH F+ G CSCGDYW
Sbjct: 611 NLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/474 (23%), Positives = 216/474 (45%), Gaps = 22/474 (4%)

Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           ++  +   LV  Y R  +++D    F ++ E N  S+  ++  Y  N ++ + L+LF + 
Sbjct: 15  KETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKS 74

Query: 171 QVEGIKPNSFTFSTVLGVLA--DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK 228
             E ++ N  T+ TVL   A   E  +    ++H   I  G      V N+LI MY K  
Sbjct: 75  INEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCG 134

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
             + A  VF+ ME ++ I++ SM+  Y     H+EA+E +  M   G       + + + 
Sbjct: 135 SFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALA 194

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRT-----GLMVAYSKCGKMEDASKIFSMMRE 343
           +C T +E      +H ++       +H  RT      L+  Y + G++  A  +F  +R 
Sbjct: 195 VCPTIRE---GEAIHVKL------GNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIR- 244

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
            KD+ S+  MI+   +      A++ + +M    + PN +T++ +L A   +       +
Sbjct: 245 YKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKE 304

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           +H  +   +     +  TAL+N Y K G   EA  VF     K++  W+++++ Y+Q G 
Sbjct: 305 IHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQ 364

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
           ++  ++ Y+++  EGV P++ TF+++ NAC+      E    F A      +       +
Sbjct: 365 SQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYT 424

Query: 520 ALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            ++ +  + G +  A E+ +      D+V+W  ++     +G  K     +K +
Sbjct: 425 CMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRI 478



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 207/447 (46%), Gaps = 17/447 (3%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F    ++N   Y  ++  Y  + LH++AL LF       L    +T  +VLK+C  L + 
Sbjct: 40  FSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGED 99

Query: 95  VF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+++H   +  GF  D+ V  SL+ +Y +  + +    VF+ M   N++S+TS++ 
Sbjct: 100 YLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQ 159

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-E 211
            Y     +    EL+ +M  EGI P+ + ++  L V        T  +   + +K G  E
Sbjct: 160 AYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAV------CPTIREGEAIHVKLGNHE 213

Query: 212 VVTSVC-NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
             T VC NAL+ MY +   +  A+ VFDG+  +D  ++N+M+A +   +   +A   +  
Sbjct: 214 RRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIE 273

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M     E    TF SV+  C+    L   +++H +V       D    T L+  Y+KCG 
Sbjct: 274 MEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGS 333

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
             +A  +F+    +K+V +WT+++S + Q G     +  + +M  EGV P+  T++ I  
Sbjct: 334 THEARAVFNDCG-LKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFN 392

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVG-----TALLNAYVKKGILDEAAKVFELID-EKDI 444
           A              +   E  + V      T +++   + G L EA ++   +    D+
Sbjct: 393 ACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDV 452

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           V W+ +L+     GD +   + Y+++T
Sbjct: 453 VTWTILLSACKVYGDLKIGARAYKRIT 479



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/358 (22%), Positives = 156/358 (43%), Gaps = 35/358 (9%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
            +F++   +N + Y  ++  Y   + H EA  L+  +   G+       ++ L  C  + 
Sbjct: 141 GVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIR 200

Query: 93  DHVFGRQVHCECVKSGF--ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +   G  +H   VK G    R    S +LV +Y R   +   + VFD +   ++ S+ ++
Sbjct: 201 E---GEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNM 254

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++ +A+     + + L+  M+   ++PN +TF++VL   +  G +    ++H  V   GG
Sbjct: 255 IAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV--KGG 312

Query: 211 EVVTSVC--NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           +  T V    AL++MY K     +ARAVF+    ++  TW S+++ Y          E +
Sbjct: 313 DQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAY 372

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNI----- 317
             M   G      TF ++   C+           HS +   G+ +      DH I     
Sbjct: 373 QRMNCEGVIPDDVTFTAIFNACS-----------HSGLPDEGLLYFRAMREDHWIVPLQP 421

Query: 318 -RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
             T ++    + G++ +A ++   M    DVV+WT ++S     G + +    + ++T
Sbjct: 422 HYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRIT 479


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 239/693 (34%), Positives = 383/693 (55%), Gaps = 24/693 (3%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           + N V +   + +  R  L  +AL+ FL + R G+     T S+ +  C           
Sbjct: 3   ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           +HC  +K GF+  + VS+ L+ +Y + + +++ R +FDDM E + VSW S+++GY++  +
Sbjct: 63  LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122

Query: 160 NDRVLELFHRM--QVEGIK--PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
           N+    LF  M    E  K   + FT +TVL      G       VH   +K G +    
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF 182

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V  + + MY K  ++  A   FD +E++D + WN+M+ GY  N    EA E F  M L G
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG 242

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
            +   +TF  V+K      +  + R  H++VLK G   D  + T L+  YSK   +ED  
Sbjct: 243 FKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVE 302

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           + F  M + +++VS+ A+I+G+   G  + A+  + Q+  EG+ P+ FT+  + ++    
Sbjct: 303 RAFGEMSK-RNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVS 361

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
           S      QVH H +K   +   SVG +++N Y K G  D A + FE I+  + V W+ ++
Sbjct: 362 STVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGII 421

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +G+AQ G+ E A+  + ++     K +EF+ SSVI A  +  AAVEQG+  HA  +K+ L
Sbjct: 422 SGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKA-VSSWAAVEQGRHLHAHVMKSGL 480

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +  + V SA++ MYSK G +E A +VF    ++++VSWNSMI GYAQ+G  K+AL +F+E
Sbjct: 481 DCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQE 540

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M    +    +TF+G++ AC+HAGLV+EG+ ++++MV+ + I P+MEH +CMVDL  RAG
Sbjct: 541 MTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAG 600

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
            LE+A   +    F+    +W ++L+AC +              + L+PH S+ Y  LSN
Sbjct: 601 YLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSN 660

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
           +YA+   W E +R+R LM D  V+KE G SWIE
Sbjct: 661 IYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 169/515 (32%), Positives = 285/515 (55%), Gaps = 13/515 (2%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M E+NVV WTS ++  AR  + D+ L  F +M   GI+PN+ T+S  +   A     + A
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             +H +++K G      V + LISMY K   +++AR +FD M +RD ++WNSM+AGY   
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 259 ELHMEAFETFNNMGLAGAE-----LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
            L+ EA   F +M +   E     ++  T  +V+K C      R+ + +H   +K G D 
Sbjct: 121 GLNEEACGLFCSM-INSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDS 179

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  +    +  Y KCG ++ A   F  + E KD+V+W  MI+G+ QN   + A+  F QM
Sbjct: 180 DLFVSGSTVYMYCKCGILDMAGLAFDQI-ENKDIVAWNTMITGYAQNCYEEEAIELFYQM 238

Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EG +PN  T+  +L A  A+S   V    HA ++K        V TAL++ Y K   +
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           ++  + F  + ++++V+++A++ GY+ +G  E A+++Y QL SEG++P+ FTF  + ++C
Sbjct: 299 EDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC 358

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
           +  S+ V +G Q H  S+K  L++ + V +++V  YSK G  +SA E F+   + + V W
Sbjct: 359 SV-SSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCW 417

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
             +I G+AQ+G  +KAL  F +MR+   + D  +   VI A +    V++G ++    V 
Sbjct: 418 AGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQG-RHLHAHVM 476

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           +  +  T+   S ++D+YS+ GM+E A  + + MP
Sbjct: 477 KSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP 511



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 162/550 (29%), Positives = 286/550 (52%), Gaps = 27/550 (4%)

Query: 27  YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI----RRLGLPLF 77
           YSK D+      LFD  P+R+ V +N ++  Y +  L++EA  LF  +        L + 
Sbjct: 86  YSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVS 145

Query: 78  GSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
             TL++VLK CG L     G+ VH   VK GF  D+ VS S V +Y +   ++     FD
Sbjct: 146 DFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFD 205

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            +   ++V+W ++++GYA+N   +  +ELF++M++EG KPN  TF  VL         A 
Sbjct: 206 QIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAV 265

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
               H  V+K G  +   V  AL+ MY K   + D    F  M  R+ +++N+++ GY  
Sbjct: 266 GRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSL 325

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
              + EA   ++ +   G E    TFV +   C+ +  +    Q+H   +K G+D D ++
Sbjct: 326 MGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSV 385

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              ++  YSKCG  + A + F  +    + V W  +ISG  QNG  + A+  FC+M +  
Sbjct: 386 GNSIVNFYSKCGFTDSALEAFESINR-PNSVCWAGIISGFAQNGEGEKALMQFCKMRKFI 444

Query: 378 VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            + + F+ S ++ A  + +  +    +HAH++K+  + +  VG+A+++ Y K G++++A 
Sbjct: 445 DKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQ 504

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           KVF ++ EK++V+W++M+ GYAQ G  + A+ +++++TS G+ P   TF  ++ AC+  +
Sbjct: 505 KVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACS-HA 563

Query: 494 AAVEQGKQF-----HACSIKAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLV 547
             VE+G+ F     H   I   + +  C    +V +  + G +E A   +      ++  
Sbjct: 564 GLVEEGRNFYNLMVHNYGIPPSMEHCTC----MVDLLGRAGYLEEAEAFLLSSSFSKEPG 619

Query: 548 SWNSMI--CG 555
            W S++  CG
Sbjct: 620 IWGSLLSACG 629



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 189/425 (44%), Gaps = 34/425 (8%)

Query: 22  LRSPFYSKKD-QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           + S FY  +D +  F    +RN V +N L+  Y     ++EAL ++  ++  G+     T
Sbjct: 291 MYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFT 350

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
              +  +C        G QVH   VK G   DV+V  S+V+ Y +    +     F+ +N
Sbjct: 351 FVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN 410

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             N V W  ++SG+A+N   ++ L  F +M+    K + F+ S+V+  ++    V     
Sbjct: 411 RPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRH 470

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           +H  V+K+G +    V +A+I MY K  MV DA+ VF  M +++ ++WNSM+ GY  N  
Sbjct: 471 LHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGF 530

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRT 319
             EA   F  M  +G   T  TFV ++  C+    +   R  ++ ++ N GI       T
Sbjct: 531 CKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCT 590

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            ++    + G +E+A          K+   W +++S               C     GV 
Sbjct: 591 CMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSA--------------C-----GVH 631

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
            N    S    AQ        H   ++ +Y  S+   TAL N Y  K +  E +++ +L+
Sbjct: 632 KNSDVGS--RAAQ--------HCLFLEPHYSSSY---TALSNIYASKELWSEVSRIRDLM 678

Query: 440 DEKDI 444
            +  +
Sbjct: 679 KDMGV 683


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/672 (33%), Positives = 377/672 (56%), Gaps = 25/672 (3%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMN 160
           H   VK G   DV    ++++ Y +   +     +FD+M   + VSW ++++G+      
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
           +   ++   M+  G + + +TF ++L  +A  G+     QVH+++IK G        +AL
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           + MY K + + DA   F  +   ++++WN+M+ GY        AF   + M   G ++  
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
            T+  ++ L        L  QLH +++K+G++  + +   L+ +YSKCG ++DA +IF  
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS 260

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVS 396
              ++D+V+W ++++ +L     DLA      M   G  P+ ++Y+ I++A      + +
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNN 320

Query: 397 PFQVHAHIIKTNYEKSFSVGTALLNAYVKK--GILDEAAKVFELIDEKDIVAWSAMLAGY 454
              +H  +IK  +E+S  +  AL++ Y+K   G + EA  +FE ++ KD V+W+++L G 
Sbjct: 321 GRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGL 380

Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
           +Q G +E AVK +  + S  +  + ++FS+V+ +C+   A  + G+Q H  ++K  L + 
Sbjct: 381 SQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCS-DLATFQLGQQIHVLALKYGLESN 439

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
             VSS+L+ MYSK G IE A   F+   K   ++WN+++ GYAQHG    AL++F  M  
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEX 499

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
           + ++ D ITF+ V+TAC+H GLV++G ++   M +++ + P MEHY+C VDLY R+G LE
Sbjct: 500 KKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLE 559

Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
           +A  +I  MPF    TVW+T L ACR              L+ ++P +   YVLLSNMY 
Sbjct: 560 EAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYG 619

Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLE---E 737
               W E+A+V++LM +R VKK  G+SWIEV N  ++F+A D SHP   QIY  LE   E
Sbjct: 620 NLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLLE 679

Query: 738 LSTRLKDA-GYK 748
             TR++DA G+K
Sbjct: 680 EITRMEDADGFK 691



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 274/550 (49%), Gaps = 23/550 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P R+ V +N ++  +      + + ++   +R  G  L   T  S+LK  G  F 
Sbjct: 55  LFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLK--GIAFA 112

Query: 94  HVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +F  G+QVH   +K G+A +V   ++L+D+Y +   +ED    F  +++ N VSW +++
Sbjct: 113 GMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMI 172

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYA+    +    L   M+ EG K +  T++ +L +L D        Q+H  +IK+G E
Sbjct: 173 NGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLE 232

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVTNELHMEAFETFNN 270
           +V ++CNALI+ Y K   + DA+ +FD     RD +TWNS++A Y+       AF+   +
Sbjct: 233 LVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLID 292

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-- 328
           M   G E    ++ S+I  C         R LH  V+K G +    I   L+  Y K   
Sbjct: 293 MQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDY 352

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G M++A  IF  + E KD VSW ++++G  Q G+ + AV  F  M    +  + +++S +
Sbjct: 353 GSMKEALCIFESL-EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAV 411

Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           L +   ++ F    Q+H   +K   E +  V ++L+  Y K GI+++A + FE   +   
Sbjct: 412 LRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSS 471

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           + W+A++ GYAQ G    A+ ++  +  + VK +  TF +V+ AC+     VEQG +F  
Sbjct: 472 ITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHI-GLVEQGCKFLR 530

Query: 505 C-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
           C      +  ++ +  C     V +Y + G +E A  + +    K D   W + +     
Sbjct: 531 CMESDYGVPPRMEHYACA----VDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRS 586

Query: 559 HGHTKKALEV 568
            G+ + A +V
Sbjct: 587 CGNIELACQV 596



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 120/236 (50%), Gaps = 3/236 (1%)

Query: 22  LRSPFYSKKDQ-SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           L+S + S K+   +F+    ++ V +N +L    +    ++A+  FL +R   + +   +
Sbjct: 348 LKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYS 407

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
            S+VL++C  L     G+Q+H   +K G   +  VS+SL+ +Y +   +ED RR F++ +
Sbjct: 408 FSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS 467

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           +++ ++W +L+ GYA++   +  L+LF  M+ + +K +  TF  VL   +  G+V    +
Sbjct: 468 KNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCK 527

Query: 201 -VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAG 254
            +  M    G           + +Y +S  + +A+A+ + M  + D+  W + +  
Sbjct: 528 FLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGA 583


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/712 (32%), Positives = 387/712 (54%), Gaps = 30/712 (4%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK-- 207
           ++ G+A   + +  L  +  M   G +P+ FTF  V+   A  G +      H+  I+  
Sbjct: 78  VIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLG 137

Query: 208 -NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
             G EV T   N+L++ Y K  MV DA  VFDGM  RD +TWNSMV GYV+N L   A +
Sbjct: 138 LVGSEVYTG--NSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALD 195

Query: 267 TFNNM--GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            F  M  GL   +      ++ +  C     L   R++H+ V+++G++ D  + T L+  
Sbjct: 196 CFREMHEGLQ-VQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDM 254

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KCG +  A  +F+ M   + VV+W  MI G+  NG  + A + F QM  EG +    T
Sbjct: 255 YCKCGAIASAEGMFATMPS-RTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVT 313

Query: 385 YSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
              +L A    + ++    VH ++ ++ +     + TALL  Y K G +  +  +F  + 
Sbjct: 314 AINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMT 373

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            K +V+W+ M+A Y        A+ ++ +L ++ + P+ FT S+V+ A       + Q +
Sbjct: 374 NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVL-LGLLRQCR 432

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q H+  ++        V++A++ MY++ G++ S+ ++F +   +D++SWN++I GYA HG
Sbjct: 433 QMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHG 492

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
             K ALE+F EM+   L+ +  TF+ V+TAC+ +G+ DEG   F++M  ++ I P +EHY
Sbjct: 493 QGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHY 552

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQP 666
            CM DL  RAG L + +  I  +P   +  +W ++L              AA R+  L+ 
Sbjct: 553 GCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEH 612

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            ++  YV+LS+MYA  G W++  R+R  M ++ +++    S +E+   + SF+ GD++HP
Sbjct: 613 DNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHP 672

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           QS  I+   + LS ++ +  Y  + S  +       +  I ++HS RLA+ FGL+++ A 
Sbjct: 673 QSKTIHEVSDVLSRKIGETDYPRNLSDPISLT--SRRTIIPNKHSVRLAVVFGLISSEAR 730

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           AP+ + KN+R+C  CH  +KLISK  RR IVV DTN +H F +G C CGDYW
Sbjct: 731 APILVKKNVRICNHCHHALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGDYW 782



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 215/431 (49%), Gaps = 9/431 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           T   V+K C  L     GR  H   ++ G    +V    SL+  Y +   V D  RVFD 
Sbjct: 109 TFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDG 168

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVA 196
           M   ++V+W S++ GY  N +    L+ F  M  EG  ++ +       L     +  + 
Sbjct: 169 MPVRDIVTWNSMVDGYVSNGLGALALDCFREMH-EGLQVQHDGVGIIAALAACCLDSALM 227

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
              +VH  VI++G E    V  +L+ MY K   +  A  +F  M  R  +TWN M+ GY 
Sbjct: 228 QGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYA 287

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
            N    EAF+ F  M   G ++   T ++++  CA T+     R +H  V ++       
Sbjct: 288 LNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVV 347

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           + T L+  YSK GK++ +  IF  M   K +VSW  MI+ ++     + A+  F ++  +
Sbjct: 348 LETALLEMYSKVGKVKSSETIFGQMTN-KTLVSWNNMIAAYMYKEMYNEAITLFLELLNQ 406

Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
            + P+ FT S ++ A   +       Q+H++I++ +Y ++  V  A+++ Y + G +  +
Sbjct: 407 PLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSS 466

Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
            K+F+ +  KD+++W+ ++ GYA  G  + A++++ ++ S G++PNE TF SV+ AC+  
Sbjct: 467 RKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVS 526

Query: 493 SAAVEQGKQFH 503
             A E   QF+
Sbjct: 527 GMADEGWIQFN 537



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 207/421 (49%), Gaps = 14/421 (3%)

Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
           D+   N ++ G+    L   A   +  M  AGA   R TF  V+K CA    L   R  H
Sbjct: 71  DAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAH 130

Query: 304 SQVLKNGIDFDHNIRTG--LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNG 361
           S  ++ G+     + TG  L+  Y+K G + DA ++F  M  ++D+V+W +M+ G++ NG
Sbjct: 131 SAAIRLGL-VGSEVYTGNSLLAFYAKLGMVADAERVFDGM-PVRDIVTWNSMVDGYVSNG 188

Query: 362 AIDLAVNFFCQMTREG--VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSV 415
              LA++ F +M  EG  V+ +G      L A    S      +VHA++I+   E+   V
Sbjct: 189 LGALALDCFREM-HEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKV 247

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
           GT+LL+ Y K G +  A  +F  +  + +V W+ M+ GYA  G  E A   + Q+ +EG 
Sbjct: 248 GTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGH 307

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
           +    T  +++ AC    +++  G+  H    +++    + + +AL+ MYSK G ++S+ 
Sbjct: 308 QVEVVTAINLLAACAQTESSL-YGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSE 366

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
            +F +   + LVSWN+MI  Y       +A+ +F E+  Q L  D  T   V+ A    G
Sbjct: 367 TIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLG 426

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
           L+ + +Q    +V   +   T+   + M  +Y+R G +  +  I ++M        W T+
Sbjct: 427 LLRQCRQMHSYIVRLDYGENTLVTNAVM-HMYARCGDVVSSRKIFDKMA-GKDVISWNTI 484

Query: 656 L 656
           +
Sbjct: 485 I 485



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 177/378 (46%), Gaps = 19/378 (5%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY+K       + +FD  P R+ V +N ++  Y  + L   AL+ F  +   GL +    
Sbjct: 152 FYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHE-GLQVQHDG 210

Query: 81  LSSVLKTCGCLFDHVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           +  +     C  D     GR+VH   ++ G  +DV V TSL+D+Y +   +     +F  
Sbjct: 211 VGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFAT 270

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M    VV+W  ++ GYA N   +   + F +M+ EG +    T   +L   A        
Sbjct: 271 MPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYG 330

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             VH  V ++       +  AL+ MY K   V+ +  +F  M ++  ++WN+M+A Y+  
Sbjct: 331 RSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYK 390

Query: 259 ELHMEAFETF---NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
           E++ EA   F    N  L     T S  V    L      LR  RQ+HS +++  +D+  
Sbjct: 391 EMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGL---LRQCRQMHSYIVR--LDYGE 445

Query: 316 N--IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           N  +   +M  Y++CG +  + KIF  M   KDV+SW  +I G+  +G   +A+  F +M
Sbjct: 446 NTLVTNAVMHMYARCGDVVSSRKIFDKMAG-KDVISWNTIIMGYAIHGQGKIALEMFSEM 504

Query: 374 TREGVRPNGFTYSIILTA 391
              G++PN  T+  +LTA
Sbjct: 505 KSNGLQPNESTFVSVLTA 522



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 131/262 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F   P R  V +N ++  Y  +   +EA + F+ ++  G  +   T  ++L  C   
Sbjct: 265 EGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQT 324

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              ++GR VH    +S F   V + T+L+++Y +   V+    +F  M    +VSW +++
Sbjct: 325 ESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMI 384

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + Y   +M +  + LF  +  + + P+ FT S V+      G++    Q+H+ +++    
Sbjct: 385 AAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYG 444

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T V NA++ MY +   V  +R +FD M  +D I+WN+++ GY  +     A E F+ M
Sbjct: 445 ENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEM 504

Query: 272 GLAGAELTRSTFVSVIKLCATT 293
              G +   STFVSV+  C+ +
Sbjct: 505 KSNGLQPNESTFVSVLTACSVS 526



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 170/347 (48%), Gaps = 18/347 (5%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+++++  G+M DA    + +R   D      +I G    G  + A+  +  M   G RP
Sbjct: 49  LVLSHAAAGRMHDA---LAAVRSSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARP 105

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKS-FSVGTALLNAYVKKGILDEAAKV 435
           + FT+ +++     +   +     H+  I+     S    G +LL  Y K G++ +A +V
Sbjct: 106 DRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERV 165

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG--VKPNEFTFSSVINACTAPS 493
           F+ +  +DIV W++M+ GY   G    A+  +R++  EG  V+ +     + + AC   S
Sbjct: 166 FDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREM-HEGLQVQHDGVGIIAALAACCLDS 224

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
           A + QG++ HA  I+  L   + V ++L+ MY K G I SA  +F     R +V+WN MI
Sbjct: 225 ALM-QGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMI 283

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC--THAGLVDEGQQYFDIMVNEH 611
            GYA +G  ++A + F +M+ +  + + +T I ++ AC  T + L       +   V   
Sbjct: 284 GGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGY---VTRS 340

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
              P +   + ++++YS+ G ++ +  I  +M    +   W  ++AA
Sbjct: 341 QFLPHVVLETALLEMYSKVGKVKSSETIFGQMT-NKTLVSWNNMIAA 386



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 9/174 (5%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLK 86
           K  +++F +   +  V +N ++  Y    ++ EA+ LFL +  L  PL+    T+S+V+ 
Sbjct: 363 KSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLEL--LNQPLYPDYFTMSAVVP 420

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L      RQ+H   V+  +  +  V+ +++ +Y R  +V   R++FD M   +V+S
Sbjct: 421 AFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVIS 480

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV-----LADEGIV 195
           W +++ GYA +      LE+F  M+  G++PN  TF +VL       +ADEG +
Sbjct: 481 WNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWI 534


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/647 (35%), Positives = 361/647 (55%), Gaps = 35/647 (5%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N +++MY K   +  A  +FD M +++ ++W ++V+GY  +    E F  F  M L   +
Sbjct: 104 NHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGM-LIWHQ 162

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK-CGKMEDASK 336
            T   F SVI  C         RQ+H+  LK   D    +   L++ Y K CG  ++A  
Sbjct: 163 PTEFAFASVISACGGDDNC--GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWN 220

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           ++  M   +++VSW +MI+G    G  + A+  F QM   G+R +  T   I +    + 
Sbjct: 221 VYEAM-GFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMG 279

Query: 397 P-----FQVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAAKVF-ELIDEKDIVAWSA 449
                 FQ+    IKT +     V TAL+ AY    G + +  ++F EL   +D+V+W+ 
Sbjct: 280 DGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTG 339

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++A +A+  D + A+ I+RQ   E + P+   FS V+ AC A  A         +  +K 
Sbjct: 340 IIAAFAE-RDPKKALVIFRQFLRECLAPDRHMFSIVLKAC-AGLATERHALTVQSHVLKV 397

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              + + +++AL+   ++ G++  + +VF +   RD VSWNSM+  YA HG  K+AL +F
Sbjct: 398 GFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLF 457

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            +M   D + DG TF+ +++AC+HAG+ +EG + F+ M N H I P ++HY+CMVD+  R
Sbjct: 458 SQM---DAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGR 514

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG + +A ++I++MP    + VW  +L +CR              L  L P++S  YVL+
Sbjct: 515 AGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLM 574

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN++   G + E   +R+ M  + V+KE G SWIEV N+ + F +G   HP+   I ++L
Sbjct: 575 SNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARL 634

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP----AGAPLQI 791
           EEL  RLKD GY P  S  L DI+DEHKE  L  HSE+LA+AF L+       +G  ++I
Sbjct: 635 EELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKI 694

Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +KN+R+C DCH  +KL S+L   +IVVRD+NRFHHFK  +CSC DYW
Sbjct: 695 MKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 262/536 (48%), Gaps = 23/536 (4%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLKTCGCLFDHVFGRQ 99
           N + + RLL   C     QEAL LF  I     PL  S  T +++ + C        G+ 
Sbjct: 29  NLLHHIRLL---CSRGHLQEALKLFYSITPPP-PLVHSHHTYAALFQACARRSSLPEGQA 84

Query: 100 VHCECVKSGFARDVNV--STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           +H          D N+  +  +V++Y +  +++   ++FD+M E N+VSWT+L+SGYA++
Sbjct: 85  LHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQH 144

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
             ++    +F  M +   +P  F F++V+      G      QVH + +K   +    V 
Sbjct: 145 GRSNECFRVFRGMLIWH-QPTEFAFASVISACG--GDDNCGRQVHALALKTSFDSCVYVG 201

Query: 218 NALISMYLKSKMVRD-ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
           NALI MY KS    D A  V++ M  R+ ++WNSM+AG+        A E F+ M + G 
Sbjct: 202 NALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGI 261

Query: 277 ELTRSTFVSVIK-LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKMEDA 334
              R+T VS+   LC     L    QL    +K G      + T L+ AYS   G++ D 
Sbjct: 262 RFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDC 321

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            +IF  +   +DVVSWT +I+   +      A+  F Q  RE + P+   +SI+L A   
Sbjct: 322 YRIFLELDGRQDVVSWTGIIAAFAERDP-KKALVIFRQFLRECLAPDRHMFSIVLKACAG 380

Query: 395 VS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           ++       V +H++K  +E    +  AL++A  + G +  + +VF+ +  +D V+W++M
Sbjct: 381 LATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSM 440

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           L  YA  G  + A+ ++ Q+ ++   P+  TF ++++AC+    A E  K F   S    
Sbjct: 441 LKAYAMHGQGKEALLLFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHG 497

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVF-KRQRKRDLVSWNSMICGYAQHGHTKKA 565
           +   L   + +V +  + G I  A E+  K   + D V W++++    +HG TK A
Sbjct: 498 IVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLA 553



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 200/443 (45%), Gaps = 20/443 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
             +FD  P++N V +  L+  Y +     E   +F G+     P      +SV+  CG  
Sbjct: 120 HQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWHQPT-EFAFASVISACG-- 176

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRT-NNVEDGRRVFDDMNESNVVSWTSL 150
            D   GRQVH   +K+ F   V V  +L+ +Y ++    ++   V++ M   N+VSW S+
Sbjct: 177 GDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSM 236

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI-VATAVQVHTMVIKNG 209
           ++G+      +R LELF +M V GI+ +  T  ++   L   G  +    Q+  + IK G
Sbjct: 237 IAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTG 296

Query: 210 GEVVTSVCNALISMYLK-SKMVRDARAVFDGMEDR-DSITWNSMVAGYVTNELHMEAFET 267
             +   V  AL+  Y      V D   +F  ++ R D ++W  ++A +   +   +A   
Sbjct: 297 FILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERDPK-KALVI 355

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F           R  F  V+K CA     R A  + S VLK G + D  +   L+ A ++
Sbjct: 356 FRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACAR 415

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +  + ++F  M   +D VSW +M+  +  +G    A+  F QM     +P+G T+  
Sbjct: 416 CGSVALSKQVFDKMGS-RDTVSWNSMLKAYAMHGQGKEALLLFSQMD---AQPDGATFVA 471

Query: 388 ILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF---ELID---- 440
           +L+A       +  A I +T    +  +   L +      IL  A ++    ELID    
Sbjct: 472 LLSACSHAGMAEEGAKIFET-MSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPM 530

Query: 441 EKDIVAWSAMLAGYAQIGDTEGA 463
           E D V WSA+L    + G+T+ A
Sbjct: 531 EPDSVVWSALLGSCRKHGETKLA 553



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 111/199 (55%), Gaps = 7/199 (3%)

Query: 400 VHAHIIKTNYEKSFSV--GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           +H H+   N    F++     ++N Y K G LD A ++F+ + EK+IV+W+A+++GYAQ 
Sbjct: 85  LHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQH 144

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G +    +++R +     +P EF F+SVI+AC         G+Q HA ++K   ++ + V
Sbjct: 145 GRSNECFRVFRGMLIWH-QPTEFAFASVISACGGDDNC---GRQVHALALKTSFDSCVYV 200

Query: 518 SSALVTMYSKK-GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
            +AL+ MY K  G  + A  V++    R+LVSWNSMI G+   G   +ALE+F +M    
Sbjct: 201 GNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGG 260

Query: 577 LEFDGITFIGVITACTHAG 595
           + FD  T + + +     G
Sbjct: 261 IRFDRATLVSIFSCLCGMG 279



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 77/139 (55%), Gaps = 9/139 (6%)

Query: 458 GDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN--A 514
           G  + A+K++  +T    +  +  T++++  AC A  +++ +G+  H        N+   
Sbjct: 41  GHLQEALKLFYSITPPPPLVHSHHTYAALFQAC-ARRSSLPEGQALHRHMFLHNPNSDFN 99

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR- 573
           L +++ +V MY+K G+++ A ++F    ++++VSW +++ GYAQHG + +   VF+ M  
Sbjct: 100 LFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLI 159

Query: 574 -RQDLEFDGITFIGVITAC 591
             Q  EF    F  VI+AC
Sbjct: 160 WHQPTEF---AFASVISAC 175


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/562 (38%), Positives = 333/562 (59%), Gaps = 22/562 (3%)

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           LR   QLH++ LK     + ++ T L+  Y+KCG +  A ++F  M      V WTA+I+
Sbjct: 87  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPH-PSTVPWTALIT 145

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE----K 411
            ++  G +  AV+        G+RP+ FT   +LTA   ++       + +   +    +
Sbjct: 146 AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQ 205

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
           S  V TA ++ YVK G + +A +VF+ +  KD VAW AM+ GYA  G    A+ ++  + 
Sbjct: 206 SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 265

Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGN 530
           +EG+KP+ +  +  ++ACT    A++ G+Q          L+N + + +AL+ MY+K G+
Sbjct: 266 AEGMKPDCYAVAGALSACTR-LGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGS 323

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
              A  VF++ RK+D++ WN+MI G    GH K A  +  +M +  ++ +  TFIG++ +
Sbjct: 324 TVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCS 383

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           CTH GL+ +G++YF  M   +HI P +EHY CMVDL SRAG+L++A  +++ MP  A+A 
Sbjct: 384 CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAV 443

Query: 651 VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           +   +L  C+              LI L+P +S  YV+LSN+Y+  G W++ A++R  M 
Sbjct: 444 ILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 503

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
            + V+K    SW+E + K + F  GD SHP S+QIY KL+EL   +K  GY+P T  V+ 
Sbjct: 504 AKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 563

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D++DE KE  L  HSE+LAIAF L+ T  G  +++ KNLRVC DCHT IKL+S++  R+I
Sbjct: 564 DVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREI 623

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           +VRD NRFH F++G CSC DYW
Sbjct: 624 IVRDNNRFHCFRDGSCSCNDYW 645



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 185/414 (44%), Gaps = 9/414 (2%)

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGI---VATAVQVHTMVIKNGGEVVTSVCNALISM 223
            H ++V  + PN    +  + + +   +   +    Q+H   +K        V  +L+S+
Sbjct: 56  LHALRVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSL 115

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K  ++  A+ VFD M    ++ W +++  Y+      EA     N    G      T 
Sbjct: 116 YAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTA 175

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           V V+  CA   +L     +     + G+     + T  +  Y KCG+M  A ++F  MR 
Sbjct: 176 VRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRH 235

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAH 403
            KD V+W AM+ G+  NG    A++ F  M  EG++P+ +  +  L+A   +    +   
Sbjct: 236 -KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ 294

Query: 404 IIKTNYEKSF----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
            I+      F     +GTAL++ Y K G   EA  VF+ + +KDI+ W+AM+ G    G 
Sbjct: 295 AIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGH 354

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
            + A  +  Q+   GVK N+ TF  ++ +CT      +  + FH  +    ++  +    
Sbjct: 355 EKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYG 414

Query: 520 ALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +V + S+ G ++ A + V       + V   +++ G   H +T+ A  V K++
Sbjct: 415 CMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQL 468



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 170/383 (44%), Gaps = 13/383 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H   +K     + +V TSL+ LY +   +   +RVFD+M   + V WT+L++ Y  
Sbjct: 90  GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 149

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  + +       G++P+SFT   VL   A    +AT   V     + G      V
Sbjct: 150 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 209

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             A + +Y+K   +  AR VFD M  +D++ W +MV GY +N    EA + F  M   G 
Sbjct: 210 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 269

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +         +  C     L L RQ    V  +    +  + T L+  Y+KCG   +A  
Sbjct: 270 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 329

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQP 393
           +F  MR+ KD++ W AMI G    G   +A     QM + GV+ N  T+  +L   T   
Sbjct: 330 VFQQMRK-KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTG 388

Query: 394 AVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDE----KDIVAW 447
            +   + + H +   Y  S  +     +++   + G+L EA    +L+D+     + V  
Sbjct: 389 LIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA---HQLVDDMPMPANAVIL 445

Query: 448 SAMLAGYAQIGDTEGAVKIYRQL 470
            A+L G     +TE A  + +QL
Sbjct: 446 GALLGGCKIHRNTELAEHVLKQL 468



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 23/339 (6%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + Q +FD  P  + V +  L+  Y      +EA+++       G+     T   VL  C 
Sbjct: 124 RAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACA 183

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            + D   G  V     + G A+ V V+T+ VDLY++   +   R VFD M   + V+W +
Sbjct: 184 RIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGA 243

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GYA N      L+LF  MQ EG+KP+ +  +  L      G +    Q   MV  + 
Sbjct: 244 MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 303

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 +  ALI MY K     +A  VF  M  +D I WN+M+ G         AF    
Sbjct: 304 FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 363

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI-----------R 318
            M  +G +L  +TF+ +  LC+ T         H+ ++++G  + HN+            
Sbjct: 364 QMEKSGVKLNDNTFIGL--LCSCT---------HTGLIQDGRRYFHNMTKLYHISPRIEH 412

Query: 319 TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            G MV   S+ G +++A ++   M    + V   A++ G
Sbjct: 413 YGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGG 451



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+  T    + + +     +  G+Q HA S+K   +    V ++L+++Y+K G +  A  
Sbjct: 68  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF        V W ++I  Y   G  ++A+ V +      +  D  T + V+TAC     
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  G+  +     E  +  ++   +  VDLY + G + KA ++ ++M
Sbjct: 188 LATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 233


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/562 (38%), Positives = 333/562 (59%), Gaps = 22/562 (3%)

Query: 296  LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
            LR   QLH++ LK     + ++ T L+  Y+KCG +  A ++F  M      V WTA+I+
Sbjct: 566  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPH-PSTVPWTALIT 624

Query: 356  GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE----K 411
             ++  G +  AV+        G+RP+ FT   +LTA   ++       + +   +    +
Sbjct: 625  AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQ 684

Query: 412  SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            S  V TA ++ YVK G + +A +VF+ +  KD VAW AM+ GYA  G    A+ ++  + 
Sbjct: 685  SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 744

Query: 472  SEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGN 530
            +EG+KP+ +  +  ++ACT    A++ G+Q          L+N + + +AL+ MY+K G+
Sbjct: 745  AEGMKPDCYAVAGALSACTR-LGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGS 802

Query: 531  IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
               A  VF++ RK+D++ WN+MI G    GH K A  +  +M +  ++ +  TFIG++ +
Sbjct: 803  TVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCS 862

Query: 591  CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
            CTH GL+ +G++YF  M   +HI P +EHY CMVDL SRAG+L++A  +++ MP  A+A 
Sbjct: 863  CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAV 922

Query: 651  VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
            +   +L  C+              LI L+P +S  YV+LSN+Y+  G W++ A++R  M 
Sbjct: 923  ILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 982

Query: 697  DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
             + V+K    SW+E + K + F  GD SHP S+QIY KL+EL   +K  GY+P T  V+ 
Sbjct: 983  AKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 1042

Query: 757  DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
            D++DE KE  L  HSE+LAIAF L+ T  G  +++ KNLRVC DCHT IKL+S++  R+I
Sbjct: 1043 DVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREI 1102

Query: 817  VVRDTNRFHHFKEGLCSCGDYW 838
            +VRD NRFH F++G CSC DYW
Sbjct: 1103 IVRDNNRFHCFRDGSCSCNDYW 1124



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 185/414 (44%), Gaps = 9/414 (2%)

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGI---VATAVQVHTMVIKNGGEVVTSVCNALISM 223
            H ++V  + PN    +  + + +   +   +    Q+H   +K        V  +L+S+
Sbjct: 535 LHALRVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSL 594

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K  ++  A+ VFD M    ++ W +++  Y+      EA     N    G      T 
Sbjct: 595 YAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTA 654

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           V V+  CA   +L     +     + G+     + T  +  Y KCG+M  A ++F  MR 
Sbjct: 655 VRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRH 714

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAH 403
            KD V+W AM+ G+  NG    A++ F  M  EG++P+ +  +  L+A   +    +   
Sbjct: 715 -KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ 773

Query: 404 IIKTNYEKSF----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
            I+      F     +GTAL++ Y K G   EA  VF+ + +KDI+ W+AM+ G    G 
Sbjct: 774 AIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGH 833

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
            + A  +  Q+   GVK N+ TF  ++ +CT      +  + FH  +    ++  +    
Sbjct: 834 EKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYG 893

Query: 520 ALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +V + S+ G ++ A + V       + V   +++ G   H +T+ A  V K++
Sbjct: 894 CMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQL 947



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 170/383 (44%), Gaps = 13/383 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H   +K     + +V TSL+ LY +   +   +RVFD+M   + V WT+L++ Y  
Sbjct: 569 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 628

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  + +       G++P+SFT   VL   A    +AT   V     + G      V
Sbjct: 629 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 688

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             A + +Y+K   +  AR VFD M  +D++ W +MV GY +N    EA + F  M   G 
Sbjct: 689 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 748

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +         +  C     L L RQ    V  +    +  + T L+  Y+KCG   +A  
Sbjct: 749 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 808

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQP 393
           +F  MR+ KD++ W AMI G    G   +A     QM + GV+ N  T+  +L   T   
Sbjct: 809 VFQQMRK-KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTG 867

Query: 394 AVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDE----KDIVAW 447
            +   + + H +   Y  S  +     +++   + G+L EA    +L+D+     + V  
Sbjct: 868 LIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA---HQLVDDMPMPANAVIL 924

Query: 448 SAMLAGYAQIGDTEGAVKIYRQL 470
            A+L G     +TE A  + +QL
Sbjct: 925 GALLGGCKIHRNTELAEHVLKQL 947



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 23/339 (6%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + Q +FD  P  + V +  L+  Y      +EA+++       G+     T   VL  C 
Sbjct: 603 RAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACA 662

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            + D   G  V     + G A+ V V+T+ VDLY++   +   R VFD M   + V+W +
Sbjct: 663 RIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGA 722

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GYA N      L+LF  MQ EG+KP+ +  +  L      G +    Q   MV  + 
Sbjct: 723 MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 782

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 +  ALI MY K     +A  VF  M  +D I WN+M+ G         AF    
Sbjct: 783 FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 842

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI-----------R 318
            M  +G +L  +TF+ +  LC+ T         H+ ++++G  + HN+            
Sbjct: 843 QMEKSGVKLNDNTFIGL--LCSCT---------HTGLIQDGRRYFHNMTKLYHISPRIEH 891

Query: 319 TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            G MV   S+ G +++A ++   M    + V   A++ G
Sbjct: 892 YGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGG 930



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+  T    + + +     +  G+Q HA S+K   +    V ++L+++Y+K G +  A  
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF        V W ++I  Y   G  ++A+ V +      +  D  T + V+TAC     
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  G+  +     E  +  ++   +  VDLY + G + KA ++ ++M
Sbjct: 667 LATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 712


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/579 (38%), Positives = 343/579 (59%), Gaps = 31/579 (5%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGI-----DFDHNIRTGLMVAYSKCGKMEDASKIF 338
           +S+++LC +++     +Q+H+  +++G+     DF+ ++   L+   S    M  A++IF
Sbjct: 38  ISLVQLCGSSQSK--LKQIHAFSIRHGVPPQNPDFNKHLIFALV---SLSAPMSFAAQIF 92

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSP 397
           + + +  ++ +W  MI G  ++     AV  F QM     + P+  T+  +  A   +  
Sbjct: 93  NQI-QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMD 151

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                 +H+ +++  ++    V  +L++ Y   G  + A +VFE++  +D VAW++++ G
Sbjct: 152 VSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVING 211

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +A  G    A+ +YR++ SEGV+P+ FT  S+++AC     A+  G++ H   +K  L  
Sbjct: 212 FALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVE-LGALALGERVHMYMVKVGLVQ 270

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
               S+AL+ +YSK GN   A +VF    +R +VSW S+I G A +G   +AL++F E+ 
Sbjct: 271 NQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELE 330

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
           RQ L+   ITF+GV+ AC+H G++DEG  YF  M  E+ I P +EH+ CMVDL  RAG +
Sbjct: 331 RQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKV 390

Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
             A D I  MP   +A +WRT+L AC               +  L+   S  +VLLSN+Y
Sbjct: 391 GDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLY 450

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A+   W +   VRK+M  + VKK  GYS +E+KN+ Y F+ GD SHPQS + Y+ L +++
Sbjct: 451 ASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKIT 510

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
             LK  GY P T  VL DI++E KE  LS H+E++AIAF LV TP G P++I+KNLRVC 
Sbjct: 511 QLLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCA 570

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH  IKLISK+  R+I+VRD +RFHHFK+G CSC DYW
Sbjct: 571 DCHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 138/259 (53%), Gaps = 2/259 (0%)

Query: 134 RVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADE 192
           ++F+ +   N+ +W +++ G+A ++     +ELF +M     I P++ TF  +   +A  
Sbjct: 90  QIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKL 149

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             V+    +H++V++NG + +  V N+L+ MY        A  VF+ M  RD + WNS++
Sbjct: 150 MDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVI 209

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            G+  N +  EA   +  MG  G E    T VS++  C     L L  ++H  ++K G+ 
Sbjct: 210 NGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLV 269

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            + +    L+  YSKCG   DA K+F  M E + VVSWT++I G   NG  + A+  F +
Sbjct: 270 QNQHASNALLDLYSKCGNFRDAQKVFDEMEE-RSVVSWTSLIVGLAVNGLGNEALKLFGE 328

Query: 373 MTREGVRPNGFTYSIILTA 391
           + R+G++P+  T+  +L A
Sbjct: 329 LERQGLKPSEITFVGVLYA 347



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 191/393 (48%), Gaps = 15/393 (3%)

Query: 200 QVHTMVIKNGGEVVTSVCN-----ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG 254
           Q+H   I++G        N     AL+S+   S  +  A  +F+ ++  +  TWN+M+ G
Sbjct: 53  QIHAFSIRHGVPPQNPDFNKHLIFALVSL---SAPMSFAAQIFNQIQAPNIFTWNTMIRG 109

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
           +  +E    A E F+ M  A + L  + TF  + K  A   ++ L   +HS V++NG D 
Sbjct: 110 FAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDS 169

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
              ++  L+  YS  G  E A ++F +M   +D V+W ++I+G   NG  + A+  + +M
Sbjct: 170 LRFVQNSLVHMYSVFGFAESAYQVFEIM-SYRDRVAWNSVINGFALNGMPNEALTLYREM 228

Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EGV P+GFT   +L+A   +       +VH +++K    ++     ALL+ Y K G  
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNF 288

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            +A KVF+ ++E+ +V+W++++ G A  G    A+K++ +L  +G+KP+E TF  V+ AC
Sbjct: 289 RDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVS 548
           +      E    F     +  +   +     +V +  + G +  A +  +      + V 
Sbjct: 349 SHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVI 408

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           W +++     HGH +       E++R +    G
Sbjct: 409 WRTLLGACTIHGHLELGEVARAEIQRLEQRHSG 441



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 28/301 (9%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   + K    L D   G  +H   V++GF     V  SLV +Y      E   +VF+ M
Sbjct: 138 TFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIM 197

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           +  + V+W S+++G+A N M +  L L+  M  EG++P+ FT  ++L    + G +A   
Sbjct: 198 SYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGE 257

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           +VH  ++K G        NAL+ +Y K    RDA+ VFD ME+R  ++W S++ G   N 
Sbjct: 258 RVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNG 317

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
           L  EA + F  +   G + +  TFV V+  C+           H  +L  G ++   ++ 
Sbjct: 318 LGNEALKLFGELERQGLKPSEITFVGVLYACS-----------HCGMLDEGFNYFRRMKE 366

Query: 320 -----------GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAM-----ISGHLQNGA 362
                      G MV    + GK+ DA      M    + V W  +     I GHL+ G 
Sbjct: 367 EYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGE 426

Query: 363 I 363
           +
Sbjct: 427 V 427



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 7/173 (4%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           +++    +F+    R+ V +N ++  +  + +  EAL L+  +   G+   G T+ S+L 
Sbjct: 186 FAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLS 245

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L     G +VH   VK G  ++ + S +L+DLY +  N  D ++VFD+M E +VVS
Sbjct: 246 ACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVS 305

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL------GVLADEG 193
           WTSL+ G A N + +  L+LF  ++ +G+KP+  TF  VL      G+L DEG
Sbjct: 306 WTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGML-DEG 357


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 215/562 (38%), Positives = 333/562 (59%), Gaps = 22/562 (3%)

Query: 296  LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
            LR   QLH++ LK     + ++ T L+  Y+KCG +  A ++F  M      V WTA+I+
Sbjct: 542  LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPH-PSTVPWTALIT 600

Query: 356  GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE----K 411
             ++  G +  AV+        G+RP+ FT   +LTA   ++       + +   +    +
Sbjct: 601  AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQ 660

Query: 412  SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            S  V TA ++ YVK G + +A +VF+ +  KD VAW AM+ GYA  G    A+ ++  + 
Sbjct: 661  SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 720

Query: 472  SEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGN 530
            +EG+KP+ +  +  ++ACT    A++ G+Q          L+N + + +AL+ MY+K G+
Sbjct: 721  AEGMKPDCYAVAGALSACTR-LGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGS 778

Query: 531  IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
               A  VF++ RK+D++ WN+MI G    GH K A  +  +M +  ++ +  TFIG++ +
Sbjct: 779  TVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCS 838

Query: 591  CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
            CTH GL+ +G++YF  M   +HI P +EHY CMVDL SRAG+L++A  +++ MP  A+A 
Sbjct: 839  CTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAV 898

Query: 651  VWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
            +   +L  C+              LI L+P +S  YV+LSN+Y+  G W++ A++R  M 
Sbjct: 899  ILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMK 958

Query: 697  DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
             + V+K    SW+E + K + F  GD SHP S+QIY KL+EL   +K  GY+P T  V+ 
Sbjct: 959  AKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMF 1018

Query: 757  DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
            D++DE KE  L  HSE+LAIAF L+ T  G  +++ KNLRVC DCHT IKL+S++  R+I
Sbjct: 1019 DVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITHREI 1078

Query: 817  VVRDTNRFHHFKEGLCSCGDYW 838
            +VRD NRFH F++G CSC DYW
Sbjct: 1079 IVRDNNRFHCFRDGSCSCNDYW 1100



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 185/414 (44%), Gaps = 9/414 (2%)

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGI---VATAVQVHTMVIKNGGEVVTSVCNALISM 223
            H ++V  + PN    +  + + +   +   +    Q+H   +K        V  +L+S+
Sbjct: 511 LHALRVHCLLPNPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSL 570

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K  ++  A+ VFD M    ++ W +++  Y+      EA     N    G      T 
Sbjct: 571 YAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTA 630

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           V V+  CA   +L     +     + G+     + T  +  Y KCG+M  A ++F  MR 
Sbjct: 631 VRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRH 690

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAH 403
            KD V+W AM+ G+  NG    A++ F  M  EG++P+ +  +  L+A   +    +   
Sbjct: 691 -KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQ 749

Query: 404 IIKTNYEKSF----SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
            I+      F     +GTAL++ Y K G   EA  VF+ + +KDI+ W+AM+ G    G 
Sbjct: 750 AIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGH 809

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
            + A  +  Q+   GVK N+ TF  ++ +CT      +  + FH  +    ++  +    
Sbjct: 810 EKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYG 869

Query: 520 ALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
            +V + S+ G ++ A + V       + V   +++ G   H +T+ A  V K++
Sbjct: 870 CMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQL 923



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 170/383 (44%), Gaps = 13/383 (3%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G Q+H   +K     + +V TSL+ LY +   +   +RVFD+M   + V WT+L++ Y  
Sbjct: 545 GEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMD 604

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                  + +       G++P+SFT   VL   A    +AT   V     + G      V
Sbjct: 605 AGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFV 664

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
             A + +Y+K   +  AR VFD M  +D++ W +MV GY +N    EA + F  M   G 
Sbjct: 665 ATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGM 724

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +         +  C     L L RQ    V  +    +  + T L+  Y+KCG   +A  
Sbjct: 725 KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWV 784

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL---TAQP 393
           +F  MR+ KD++ W AMI G    G   +A     QM + GV+ N  T+  +L   T   
Sbjct: 785 VFQQMRK-KDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTG 843

Query: 394 AVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDE----KDIVAW 447
            +   + + H +   Y  S  +     +++   + G+L EA    +L+D+     + V  
Sbjct: 844 LIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEA---HQLVDDMPMPANAVIL 900

Query: 448 SAMLAGYAQIGDTEGAVKIYRQL 470
            A+L G     +TE A  + +QL
Sbjct: 901 GALLGGCKIHRNTELAEHVLKQL 923



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 23/339 (6%)

Query: 30  KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           + Q +FD  P  + V +  L+  Y      +EA+++       G+     T   VL  C 
Sbjct: 579 RAQRVFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACA 638

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            + D   G  V     + G A+ V V+T+ VDLY++   +   R VFD M   + V+W +
Sbjct: 639 RIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGA 698

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GYA N      L+LF  MQ EG+KP+ +  +  L      G +    Q   MV  + 
Sbjct: 699 MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 758

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 +  ALI MY K     +A  VF  M  +D I WN+M+ G         AF    
Sbjct: 759 FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 818

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI-----------R 318
            M  +G +L  +TF+ +  LC+ T         H+ ++++G  + HN+            
Sbjct: 819 QMEKSGVKLNDNTFIGL--LCSCT---------HTGLIQDGRRYFHNMTKLYHISPRIEH 867

Query: 319 TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            G MV   S+ G +++A ++   M    + V   A++ G
Sbjct: 868 YGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGG 906



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 1/167 (0%)

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           P+  T    + + +     +  G+Q HA S+K   +    V ++L+++Y+K G +  A  
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF        V W ++I  Y   G  ++A+ V +      +  D  T + V+TAC     
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +  G+  +     E  +  ++   +  VDLY + G + KA ++ ++M
Sbjct: 643 LATGETVWRAAEQE-GVAQSVFVATAAVDLYVKCGEMAKAREVFDKM 688


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/574 (36%), Positives = 340/574 (59%), Gaps = 21/574 (3%)

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
            VS+++ CA   ++ L R +H   +K  + +       L+  Y+KCG ++ A  +F +M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLM- 59

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
            ++ VV+WT++I+ + + G  D A+  F +M REGV P+ FT + +L A       +   
Sbjct: 60  SVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGK 119

Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            VH +I + + + +  V  AL++ Y K G +++A  VF  +  KDI++W+ M+ GY++  
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A+ ++  +  E +KP+  T + ++ AC A  A++++GK+ H   ++    +   V+
Sbjct: 180 LPNEALSLFGDMVLE-MKPDGTTLACILPAC-ASLASLDRGKEVHGHILRNGFFSDQQVA 237

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           +ALV MY K G    A  +F     +DL++W  MI GY  HG    A+  F EMR+  +E
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D ++FI ++ AC+H+GL+DEG ++F++M +E ++ P +EHY+C+VDL +R+G L  A  
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357

Query: 639 IINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGH 684
            I  MP    AT+W  +L+ CR+                L+P ++  YVLL+N YA    
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W+E  ++R+ +  R +KK  G SWIEVK+K + FLAG+ SHPQ+ +I   L+ L +++K+
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKE 477

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            GY P T Y L + D   KE  L  HSE+LA+AFG++  P    +++ KNLRVCGDCH +
Sbjct: 478 EGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEM 537

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            K ISK   R+IV+RD+NRFHHFK+G+C C  +W
Sbjct: 538 AKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 187/381 (49%), Gaps = 12/381 (3%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           + S+L+ C    D   GR VH   VK+          +L+D+Y +   ++    VFD M+
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
              VV+WTSL++ YAR  ++D  + LFH M  EG+ P+ FT +TVL   A  G +     
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH  + +N  +    VCNAL+ MY K   + DA +VF  M  +D I+WN+M+ GY  N L
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
             EA   F +M L   +   +T   ++  CA+   L   +++H  +L+NG   D  +   
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y KCG    A  +F M+   KD+++WT MI+G+  +G  + A+  F +M + G+ P
Sbjct: 240 LVDMYVKCGVPVLARLLFDMI-PTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEP 298

Query: 381 NGFTYSIILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           +  ++  IL A             F V     + N +        +++   + G L  A 
Sbjct: 299 DEVSFISILYACSHSGLLDEGWRFFNVMQD--ECNVKPKLEHYACIVDLLARSGKLAMAY 356

Query: 434 KVFELID-EKDIVAWSAMLAG 453
           K  + +  E D   W A+L+G
Sbjct: 357 KFIKSMPIEPDATIWGALLSG 377



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 162/335 (48%), Gaps = 24/335 (7%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD    R  V +  L+  Y R+ L  EA+ LF  + R G+     T+++VL  C C   
Sbjct: 55  VFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGS 114

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ VH    ++    ++ V  +L+D+Y +  ++ED   VF +M   +++SW +++ G
Sbjct: 115 LENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGG 174

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y++N + +  L LF  M +E +KP+  T + +L   A    +    +VH  +++NG    
Sbjct: 175 YSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSD 233

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V NAL+ MY+K  +   AR +FD +  +D ITW  M+AGY  +     A  TFN M  
Sbjct: 234 QQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ 293

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF------DHNIRTGL------ 321
           AG E    +F+S++  C+           HS +L  G  F      + N++  L      
Sbjct: 294 AGIEPDEVSFISILYACS-----------HSGLLDEGWRFFNVMQDECNVKPKLEHYACI 342

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
           +   ++ GK+  A K    M    D   W A++SG
Sbjct: 343 VDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 92/164 (56%), Gaps = 1/164 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
            S+F   P ++ + +N ++  Y ++SL  EAL+LF G   L +   G+TL+ +L  C  L
Sbjct: 154 NSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLF-GDMVLEMKPDGTTLACILPACASL 212

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G++VH   +++GF  D  V+ +LVD+Y++       R +FD +   ++++WT ++
Sbjct: 213 ASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMI 272

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           +GY  +   +  +  F+ M+  GI+P+  +F ++L   +  G++
Sbjct: 273 AGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLL 316


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/678 (32%), Positives = 376/678 (55%), Gaps = 23/678 (3%)

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM-NESNVV 145
           T G   + + G+ +H + V  G   ++ +  SL++LY   +  +  + VF  + N  ++ 
Sbjct: 204 TAGSALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDIT 263

Query: 146 SWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
            W  L++   +N +    LE+FHR+     +KP++FT+ +VL   +  G V     VHT 
Sbjct: 264 LWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTH 323

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           VIK+G  +   V ++ + MY K  +  DA  +FD M +RD  +WN++++ Y  +    +A
Sbjct: 324 VIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKA 383

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            E F  M ++G +    T  +VI  CA   +L   +++H +++++G   D  + + L+  
Sbjct: 384 LELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDM 443

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KCG +E A ++F  ++  K+VVSW +MI+G+   G     +  F +M  EG+RP   T
Sbjct: 444 YGKCGCLEMAKEVFEQIQR-KNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTT 502

Query: 385 YSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            S IL A       Q    +H +II+   E    V ++L++ Y K G +  A  VF+ + 
Sbjct: 503 LSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 562

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           + ++V+W+ M++GY ++G    A+ I+  +   GVKP+  TF+SV+ AC+   A +E+GK
Sbjct: 563 KTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQ-LAVLEKGK 621

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           + H   I++KL     V  AL+ MY+K G ++ A  +F +  +RD VSW SMI  Y  HG
Sbjct: 622 EIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHG 681

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
              +AL++F++M++ D + D +TF+ +++AC+HAGLVDEG  YF+ M+ E+   P +EHY
Sbjct: 682 QAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHY 741

Query: 621 SCMVDLYSRAGMLEKAMDIINRMP-FAASATVWRTVLAACR--------------LISLQ 665
           SC++DL  R G L +A +I+ R P       +  T+ +AC               LI   
Sbjct: 742 SCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKD 801

Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
           P D + Y++LSNMYA+   W E  +VR  + +  +KK  G SWIEV  + + F+  D SH
Sbjct: 802 PDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSH 861

Query: 726 PQSNQIYSKLEELSTRLK 743
           PQ++ IY  +  L++ ++
Sbjct: 862 PQADMIYECMSILASHVE 879



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/542 (29%), Positives = 283/542 (52%), Gaps = 12/542 (2%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTCGCLFDHVFGRQVHC 102
           +N L+    ++ +  E L +F   R L  P       T  SVLK C  L    +G+ VH 
Sbjct: 265 WNGLMAACTKNFIFIEGLEVFH--RLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHT 322

Query: 103 ECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDR 162
             +KSGFA DV V +S V +Y + N  ED  ++FD+M E +V SW +++S Y ++   ++
Sbjct: 323 HVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEK 382

Query: 163 VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS 222
            LELF  M+V G KP+S T +TV+   A    +    ++H  ++++G  +   V +AL+ 
Sbjct: 383 ALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVD 442

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
           MY K   +  A+ VF+ ++ ++ ++WNSM+AGY          E F  M   G   T +T
Sbjct: 443 MYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTT 502

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
             S++  C+ +  L+L + +H  +++N ++ D  + + L+  Y KCG +  A  +F  M 
Sbjct: 503 LSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 562

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
           +  +VVSW  MISG+++ G+   A+  F  M + GV+P+  T++ +L A   ++      
Sbjct: 563 K-TNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGK 621

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           ++H  II++  E +  V  ALL+ Y K G +DEA  +F  + E+D V+W++M+A Y   G
Sbjct: 622 EIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHG 681

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
               A+K++ ++     KP++ TF ++++AC+      E    F+    +     A+   
Sbjct: 682 QAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHY 741

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           S L+ +  + G +  A E+   QR  D+     ++       H  K L++ +++ R  +E
Sbjct: 742 SCLIDLLGRVGRLREAYEIL--QRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIE 799

Query: 579 FD 580
            D
Sbjct: 800 KD 801



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 200/358 (55%), Gaps = 1/358 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+R+   +N ++  Y +D   ++AL LF  ++  G      TL++V+ +C  L D
Sbjct: 355 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 414

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+++H E V+SGFA D  VS++LVD+Y +   +E  + VF+ +   NVVSW S+++G
Sbjct: 415 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 474

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y+    +   +ELF RM  EGI+P   T S++L   +    +     +H  +I+N  E  
Sbjct: 475 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 534

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V ++LI +Y K   +  A  VF  M   + ++WN M++GYV    ++EA   F +M  
Sbjct: 535 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 594

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG +    TF SV+  C+    L   +++H+ ++++ ++ +  +   L+  Y+KCG +++
Sbjct: 595 AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDE 654

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           A  IF+ + E +D VSWT+MI+ +  +G    A+  F +M +   +P+  T+  IL+A
Sbjct: 655 ALHIFNQLPE-RDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSA 711



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 141/260 (54%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F++  ++N V +N ++  Y      +  + LF  +   G+    +TLSS+L  C   
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 513

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G+ +H   +++    D+ V++SL+DLY +  N+     VF +M ++NVVSW  ++
Sbjct: 514 VNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMI 573

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +       L +F  M+  G+KP++ TF++VL   +   ++    ++H  +I++  E
Sbjct: 574 SGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLE 633

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V  AL+ MY K   V +A  +F+ + +RD ++W SM+A Y ++    EA + F  M
Sbjct: 634 INEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 693

Query: 272 GLAGAELTRSTFVSVIKLCA 291
             + A+  + TF++++  C+
Sbjct: 694 QQSDAKPDKVTFLAILSACS 713



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 1/212 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F   P+ N V +N ++  Y +   + EAL +F  +R+ G+     T +SVL  C  L
Sbjct: 555 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 614

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+++H   ++S    +  V  +L+D+Y +   V++   +F+ + E + VSWTS++
Sbjct: 615 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMI 674

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV-QVHTMVIKNGG 210
           + Y  +      L+LF +MQ    KP+  TF  +L   +  G+V       + M+ + G 
Sbjct: 675 AAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGF 734

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           +      + LI +  +   +R+A  +     D
Sbjct: 735 KPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 766


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/532 (39%), Positives = 322/532 (60%), Gaps = 29/532 (5%)

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG-------- 382
           +  A  +F  M   +D  SW+A++S H+++G    A+  + +M RE   P G        
Sbjct: 109 LASARALFDRM-PRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLRE---PGGSGADNEFT 164

Query: 383 --FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
                +    A+ A +  ++H H+++   +    V +AL + Y K G LD+A  VF+ + 
Sbjct: 165 ASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMP 224

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
            +D+V+W+AML  Y   G      +++ ++   G+ PNEFT++ V+ AC A   + + GK
Sbjct: 225 VRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRAC-AEFTSEKLGK 283

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q H    K++  ++    SALV MYSK G++ +A  VF+   K DLVSW +MI GYAQ+G
Sbjct: 284 QVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNG 343

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
              +AL  F  +       D +TF+GV++AC HAGLVD+G   F  + +++ I  T +HY
Sbjct: 344 QPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHY 403

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQP 666
           +C++DL SR+G+ E+A D+IN MP   +  +W ++L  CR              L  ++P
Sbjct: 404 ACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEP 463

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            + A YV L+N+YA+ G + E   +R+ M  R + K    SWIEV  + + FL GD SHP
Sbjct: 464 ENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHP 523

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           Q+ +IY+ L++L  ++++ GY  DT +VL D++DE K+  +  HSERLA+AFG++ATP G
Sbjct: 524 QAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKG 583

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           +P+++ KNLR+CGDCHT IKLISK+ +R+I+VRD+NRFHHFK G CSC DYW
Sbjct: 584 SPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 171/382 (44%), Gaps = 34/382 (8%)

Query: 112 DVNVSTSLVDLYMRT-NNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
           DV    +LV    R+   +   R +FD M   +  SW++++S + R+      L ++ RM
Sbjct: 91  DVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRM 150

Query: 171 QVE---GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
             E       N FT S+ L             ++H  V++ G +    V +AL  MY K 
Sbjct: 151 LREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKF 210

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
             + DAR+VFD M  RD ++W +M+  Y       E F  F  M  +G      T+  V+
Sbjct: 211 GRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVL 270

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           + CA     +L +Q+H ++ K+         + L+  YSK G M  A ++F  M +  D+
Sbjct: 271 RACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPK-PDL 329

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
           VSWTAMISG+ QNG  D A++ F  +   G RP+  T+  +L+A         HA ++  
Sbjct: 330 VSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSA-------CAHAGLV-- 380

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
             +K   +  ++ + Y  +   D  A V +L+    +                    +  
Sbjct: 381 --DKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFE------------------RAE 420

Query: 468 RQLTSEGVKPNEFTFSSVINAC 489
             + +  VKPN+F ++S++  C
Sbjct: 421 DMINTMPVKPNKFLWASLLGGC 442



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 156/344 (45%), Gaps = 16/344 (4%)

Query: 23  RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--- 79
           RSP      ++LFDR P+R+   ++ ++  + R    + AL ++   RR+     GS   
Sbjct: 104 RSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIY---RRMLREPGGSGAD 160

Query: 80  ---TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF 136
              T SS L           GR++HC  V+ G   D  V ++L D+Y +   ++D R VF
Sbjct: 161 NEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVF 220

Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           D M   +VVSWT++L  Y     +     LF RM   GI PN FT++ VL   A+     
Sbjct: 221 DRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEK 280

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
              QVH  + K+         +AL+ MY K   +  A  VF GM   D ++W +M++GY 
Sbjct: 281 LGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYA 340

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA----TTKELRLARQLHSQVLKNGID 312
            N    EA   F+ +  +G      TFV V+  CA      K L +    HS   K GI+
Sbjct: 341 QNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGI---FHSIKDKYGIE 397

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
              +    ++   S+ G  E A  + + M    +   W +++ G
Sbjct: 398 HTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGG 441


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 263/757 (34%), Positives = 398/757 (52%), Gaps = 59/757 (7%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           ++  +   W SL++  A  +     L  F RMQ   +  N+FTF  +L   A    +   
Sbjct: 13  ISHKDTFHWNSLIAKNA-TQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR--DSITWNSMVAGYV 256
           +QVH  + + G         AL+  Y K      A  VFD M +   D ++W ++++ Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 257 TNELHMEAFETFNNM----GLAGAELTRSTFVSV---IKLCAT---TKELRLARQLHSQV 306
           +N    EAF  F  M    G  G+E      VS+   +  CA    +  LR    +H  V
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR-EMKDVVSWTAMISGHLQNGAIDL 365
           +K G     ++   ++  YS C  +  A ++F+ +  E +DVVSW ++ISG   NG  + 
Sbjct: 192 VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAER 251

Query: 366 AVNFFCQMTREG---VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTN----YEKSFS 414
           A+  F  M  EG   V PN  T   +L +   +   +    VH +I   +      K   
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVV 311

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V TALL+ + + G L  A ++F+ ++ K++V WSAM+AGY Q    E A++++RQ+  EG
Sbjct: 312 VLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEG 371

Query: 475 ------VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
                 VKPN  T  SVI AC+   A+       H  ++   L+    ++SAL+ M +K 
Sbjct: 372 NMVGVEVKPNAVTLVSVIAACSRLGAS-RSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 529 GNIESASEVFKR--QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           G+IE   +VF    +  R +VSW+SMI     HG  K+ALE+F EMR    E + IT+I 
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V++AC+HAGLV++G+  F+ M  ++ + PT +HY+C+VDL  RAG L++A ++I  MP  
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 647 ASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
           A   +W ++LAAC L              +SL  +    +VLL+NMY   G W +  R+R
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG-YKPDT 751
             +    ++K  G S+IE+ N+ YSF+A D SHP+S  IY +L+ L  R++ A  Y  +T
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTET 670

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLV----------ATPAGAPLQIVKNLRVCGDC 801
              ++D D          HSERLAIAFGL+          +     P++I KNLRVC DC
Sbjct: 671 GLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDC 730

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           H   KL+SK+  R+++VRD +RFHHF++G CSCGDYW
Sbjct: 731 HAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 268/552 (48%), Gaps = 37/552 (6%)

Query: 60  QEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSL 119
           Q AL  F  ++   +P    T  ++LK C  L   +   QVH    + G A D   + +L
Sbjct: 34  QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAAL 93

Query: 120 VDLYMRTNNVEDGRRVFDDMNES--NVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIK 176
           VD Y +  +     +VFD+M E   +VVSWT+L+S Y+ N   D     F RM+ + G  
Sbjct: 94  VDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWD 153

Query: 177 PNSFTFSTV--LGVLADEGIVATAVQ-------VHTMVIKNGGEVVTSVCNALISMYLKS 227
            +      V  LG L     V            VH +V+K G  V T + N+++ MY   
Sbjct: 154 GSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSAC 213

Query: 228 KMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNM---GLAGAELTRST 282
           K V  A  VF+G  +E RD ++WNS+++G+  N     A  TF +M   G +  E  R T
Sbjct: 214 KDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVT 273

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNG----IDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            ++++K CA    +  +  +H  +        +  D  + T L+  +++CG +  A +IF
Sbjct: 274 VIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIF 333

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG------VRPNGFTYSIILTA- 391
             + E K+VV W+AMI+G+ Q    + A+  F QM  EG      V+PN  T   ++ A 
Sbjct: 334 DGV-EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAAC 392

Query: 392 ---QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE--KDIVA 446
                + S   +H + + T  ++   + +AL++   K G ++   +VF  +DE  + +V+
Sbjct: 393 SRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVS 452

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHAC 505
           WS+M+      G+ + A++++ ++ + G +PNE T+ SV++AC+  +  VEQGK  F++ 
Sbjct: 453 WSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACS-HAGLVEQGKSCFNSM 511

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEV-FKRQRKRDLVSWNSMICGYAQHGHTKK 564
                ++      + LV +  + G+++ A  V      K DL  W S++     HG+ K 
Sbjct: 512 EKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKL 571

Query: 565 ALEVFKEMRRQD 576
              V K++   D
Sbjct: 572 GEIVEKKILSLD 583



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 160/349 (45%), Gaps = 25/349 (7%)

Query: 34  LFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTC 88
           +F+  P  QR+ V +N L+  +  +   + AL  F  +   G         T+ ++LK+C
Sbjct: 222 VFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSC 281

Query: 89  ---GCL----FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
              GC+    + H +    H   +    A+DV V T+L+D++ R  N+   R +FD +  
Sbjct: 282 AELGCVETSSWVHEYISSRHSSLL---VAKDVVVLTALLDMHARCGNLALAREIFDGVEG 338

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG------IKPNSFTFSTVLGVLADEGIV 195
            NVV W+++++GY +    +  L LF +M +EG      +KPN+ T  +V+   +  G  
Sbjct: 339 KNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGAS 398

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVA 253
            +A  +H   +  G +    + +ALI M  K   +   R VF  M++  R  ++W+SM+ 
Sbjct: 399 RSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIG 458

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GID 312
               +     A E F+ M   G E    T++SV+  C+    +   +   + + K+ G+ 
Sbjct: 459 AEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMS 518

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG-HLQN 360
                   L+    + G +++A  +   M    D+  W ++++  HL  
Sbjct: 519 PTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHG 567



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 10/232 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG------LPLFGSTLSSVL 85
           + +FD    +N V ++ ++  Y + S  +EAL LF  +   G      +     TL SV+
Sbjct: 330 REIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVI 389

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES--N 143
             C  L        +H   V +G  +D  ++++L+D+  +  ++E GR+VF +M+ES   
Sbjct: 390 AACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRT 449

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VVSW+S++     +    R LELF  M+  G +PN  T+ +VL   +  G+V        
Sbjct: 450 VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFN 509

Query: 204 MVIKNGGEVVTSVCNA-LISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVA 253
            + K+ G   T    A L+ +  ++  + +A  V   M  + D   W S++A
Sbjct: 510 SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLA 561


>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
 gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
          Length = 438

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/434 (45%), Positives = 294/434 (67%), Gaps = 15/434 (3%)

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           +L+A+ K G L  AA++F   D   I  W+AM+A Y Q GD+  A++++ +L +  ++PN
Sbjct: 6   VLSAFAKVGNLHLAARIFARTDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRIEPN 65

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
             T   V++AC A  AA+  GK+ HA +    +++ + V++A+V MYSK G ++ A E F
Sbjct: 66  SVTLMEVLDAC-ASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAF 124

Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
            R  + D VSW +M+  +AQHGH  +AL  F+ M+ Q  + + +TF+ +++AC+H GLV+
Sbjct: 125 ARIERHDTVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKGLVE 184

Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           EG++YFD+M   + I P  +HY+CMVDL  RAG L++A D +NRMP A  A V +++L+A
Sbjct: 185 EGRKYFDLMTARYGIAPDAQHYACMVDLLGRAGYLDEAEDFLNRMPGAPHAAVLKSLLSA 244

Query: 659 CR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
           CR              ++     +S  YV+L+++Y A G W+E AR+R LM +R V+K+ 
Sbjct: 245 CRSYKDVDRGERIAKRMLESFWDESMPYVVLASIYRAAGKWEEAARIRSLMVERGVRKDP 304

Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
           G S IEV+ + + F+AGD+SH Q N I +KL+ELS+ +K+AGY PDTS VL D+ +E KE
Sbjct: 305 GRSAIEVEGRVFEFVAGDMSHVQMNPIRAKLQELSSAMKEAGYVPDTSLVLHDVAEEEKE 364

Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
            +L  HSE+LA+AFGL+ TPAG+P++++KNLRVC DCH   KLIS +E+R IV RD +RF
Sbjct: 365 QVLLWHSEKLAVAFGLLNTPAGSPIRVIKNLRVCKDCHDAAKLISAIEQRRIVFRDLSRF 424

Query: 825 HHFKEGLCSCGDYW 838
           HHF+ G+CSCGDYW
Sbjct: 425 HHFENGVCSCGDYW 438



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 140/302 (46%), Gaps = 43/302 (14%)

Query: 242 DRDSI-TWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
           DR  I  WN+M+A YV +    +A   F+ +     E    T + V+  CA+   LR  +
Sbjct: 27  DRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRIEPNSVTLMEVLDACASLAALRDGK 86

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
           ++H+    +G+D +  + T ++  YSKCG +++A + F+ + E  D VSWTAM++   Q+
Sbjct: 87  RVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARI-ERHDTVSWTAMLAAFAQH 145

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALL 420
           G ID A+  F +M  +G +PN  T+              VH                 LL
Sbjct: 146 GHIDRALATFQRMQEQGHKPNYVTF--------------VH-----------------LL 174

Query: 421 NAYVKKGILDEAAKVFELIDEK-----DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
           +A   KG+++E  K F+L+  +     D   ++ M+    + G  + A     ++     
Sbjct: 175 SACSHKGLVEEGRKYFDLMTARYGIAPDAQHYACMVDLLGRAGYLDEAEDFLNRMPG--- 231

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
            P+     S+++AC +    V++G++     +++  + ++     L ++Y   G  E A+
Sbjct: 232 APHAAVLKSLLSACRS-YKDVDRGERIAKRMLESFWDESMPY-VVLASIYRAAGKWEEAA 289

Query: 536 EV 537
            +
Sbjct: 290 RI 291



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 136/320 (42%), Gaps = 54/320 (16%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F R+ +     +N ++  Y +    ++A+ LF  +    +     TL  VL  C  L  
Sbjct: 22  IFARTDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRIEPNSVTLMEVLDACASLAA 81

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G++VH      G   +V V+T++VD+Y +   +++    F  +   + VSWT++L+ 
Sbjct: 82  LRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAA 141

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           +A++   DR L  F RMQ +G KPN  TF  +L   + +G                    
Sbjct: 142 FAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACSHKG-------------------- 181

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDR-----DSITWNSMV-----AGYVTNELHME 263
                          +V + R  FD M  R     D+  +  MV     AGY+      E
Sbjct: 182 ---------------LVEEGRKYFDLMTARYGIAPDAQHYACMVDLLGRAGYLD-----E 221

Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
           A +  N M   GA    +   S++  C + K++    ++  ++L++  D +      L  
Sbjct: 222 AEDFLNRM--PGAPHA-AVLKSLLSACRSYKDVDRGERIAKRMLESFWD-ESMPYVVLAS 277

Query: 324 AYSKCGKMEDASKIFSMMRE 343
            Y   GK E+A++I S+M E
Sbjct: 278 IYRAAGKWEEAARIRSLMVE 297



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 82/175 (46%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
            +++  + +  N+    R+F   + S +  W ++++ Y ++  + + + LF  +    I+
Sbjct: 4   VTVLSAFAKVGNLHLAARIFARTDRSYIFPWNAMIAAYVQHGDSRQAIRLFDELLARRIE 63

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           PNS T   VL   A    +    +VH +   +G +   +V  A++ MY K   + +A   
Sbjct: 64  PNSVTLMEVLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEA 123

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
           F  +E  D+++W +M+A +  +     A  TF  M   G +    TFV ++  C+
Sbjct: 124 FARIERHDTVSWTAMLAAFAQHGHIDRALATFQRMQEQGHKPNYVTFVHLLSACS 178


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 262/757 (34%), Positives = 400/757 (52%), Gaps = 59/757 (7%)

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           ++  +   W SL++  A  +     L  F RMQ   +  N+FTF  +L   A    +   
Sbjct: 13  ISHKDTFHWNSLIAKNA-TQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR--DSITWNSMVAGYV 256
           +QVH  + + G         AL+  Y K      A  VFD M +   D ++W ++++ Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 257 TNELHMEAFETFNNM----GLAGAELTRSTFVSV---IKLCAT---TKELRLARQLHSQV 306
           +N    EAF+ F  M    G  G+E      VS+   +  CA    +  LR    +H  V
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191

Query: 307 LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR-EMKDVVSWTAMISGHLQNGAIDL 365
           +K G     ++   ++  YS C  +  A ++F+ +  E +DVVSW ++ISG   NG  + 
Sbjct: 192 VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAER 251

Query: 366 AVNFFCQMTREG---VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTN----YEKSFS 414
           A+  F  M  EG   V PN  T   +L +   +   +    VH +I   +      K   
Sbjct: 252 ALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVV 311

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V TALL+ + + G L  A ++F+ ++ K++V WSAM+AGY Q    E A++++RQ+  EG
Sbjct: 312 VLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEG 371

Query: 475 ------VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
                 VKPN  T  SVI AC+   A+       H  ++   L+    ++SAL+ M +K 
Sbjct: 372 NMVGVEVKPNAVTLVSVIAACSRLGAS-RSASMIHKYAVATGLDQDARIASALIDMCAKC 430

Query: 529 GNIESASEVFKR--QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
           G+IE   +VF    +  R +VSW+SMI     HG  K+ALE+F EMR    E + IT+I 
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFA 646
           V++AC+HAGLV++G+  F+ M  ++ + PT +HY+C+VDL  RAG L++A ++I  MP  
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550

Query: 647 ASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVR 692
           A   +W ++LAAC              +++SL  +    +VLL+NMY   G W +  R+R
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610

Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG-YKPDT 751
             +    ++K  G S+IE+ N+ YSF+A D SHP+S  IY +L+ L  R++ A  Y  +T
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTET 670

Query: 752 SYVLQDIDDEHKEAILSQHSERLAIAFGLV----------ATPAGAPLQIVKNLRVCGDC 801
              ++D D          HSERLAIAFGL+          +     P++I KNLRVC DC
Sbjct: 671 GLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDC 730

Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           H   KL+SK+  R+++VRD +RFHHF++G CSCGDYW
Sbjct: 731 HAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 269/552 (48%), Gaps = 37/552 (6%)

Query: 60  QEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSL 119
           Q AL  F  ++   +P    T  ++LK C  L   +   QVH    + G A D   + +L
Sbjct: 34  QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAAL 93

Query: 120 VDLYMRTNNVEDGRRVFDDMNES--NVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIK 176
           VD Y +  +     +VFD+M E   +VVSWT+L+S Y+ N   D   + F RM+ + G  
Sbjct: 94  VDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWD 153

Query: 177 PNSFTFSTV--LGVLADEGIVATAVQ-------VHTMVIKNGGEVVTSVCNALISMYLKS 227
            +      V  LG L     V            VH +V+K G  V T + N+++ MY   
Sbjct: 154 GSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSAC 213

Query: 228 KMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNM---GLAGAELTRST 282
           K V  A  VF+G  +E RD ++WNS+++G+  N     A  TF +M   G +  E  R T
Sbjct: 214 KDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVT 273

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNG----IDFDHNIRTGLMVAYSKCGKMEDASKIF 338
            ++++K CA    +  +  +H  +        +  D  + T L+  +++CG +  A +IF
Sbjct: 274 VIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIF 333

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG------VRPNGFTYSIILTA- 391
             + E K+VV W+AMI+G+ Q    + A+  F QM  EG      V+PN  T   ++ A 
Sbjct: 334 DGV-EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAAC 392

Query: 392 ---QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE--KDIVA 446
                + S   +H + + T  ++   + +AL++   K G ++   +VF  +DE  + +V+
Sbjct: 393 SRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVS 452

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHAC 505
           WS+M+      G+ + A++++ ++ + G +PNE T+ SV++AC+  +  VEQGK  F++ 
Sbjct: 453 WSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACS-HAGLVEQGKSCFNSM 511

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEV-FKRQRKRDLVSWNSMICGYAQHGHTKK 564
                ++      + LV +  + G+++ A  V      K DL  W S++     HG+ K 
Sbjct: 512 EKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKL 571

Query: 565 ALEVFKEMRRQD 576
              V K++   D
Sbjct: 572 GEIVEKKILSLD 583



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 160/349 (45%), Gaps = 25/349 (7%)

Query: 34  LFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSSVLKTC 88
           +F+  P  QR+ V +N L+  +  +   + AL  F  +   G         T+ ++LK+C
Sbjct: 222 VFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSC 281

Query: 89  ---GCL----FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
              GC+    + H +    H   +    A+DV V T+L+D++ R  N+   R +FD +  
Sbjct: 282 AELGCVETSSWVHEYISSRHSSLL---VAKDVVVLTALLDMHARCGNLALAREIFDGVEG 338

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG------IKPNSFTFSTVLGVLADEGIV 195
            NVV W+++++GY +    +  L LF +M +EG      +KPN+ T  +V+   +  G  
Sbjct: 339 KNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGAS 398

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--RDSITWNSMVA 253
            +A  +H   +  G +    + +ALI M  K   +   R VF  M++  R  ++W+SM+ 
Sbjct: 399 RSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIG 458

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GID 312
               +     A E F+ M   G E    T++SV+  C+    +   +   + + K+ G+ 
Sbjct: 459 AEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMS 518

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG-HLQN 360
                   L+    + G +++A  +   M    D+  W ++++  HL  
Sbjct: 519 PTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHG 567



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 10/232 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLG------LPLFGSTLSSVL 85
           + +FD    +N V ++ ++  Y + S  +EAL LF  +   G      +     TL SV+
Sbjct: 330 REIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVI 389

Query: 86  KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES--N 143
             C  L        +H   V +G  +D  ++++L+D+  +  ++E GR+VF +M+ES   
Sbjct: 390 AACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRT 449

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VVSW+S++     +    R LELF  M+  G +PN  T+ +VL   +  G+V        
Sbjct: 450 VVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFN 509

Query: 204 MVIKNGGEVVTSVCNA-LISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVA 253
            + K+ G   T    A L+ +  ++  + +A  V   M  + D   W S++A
Sbjct: 510 SMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLA 561


>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
 gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
 gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
 gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
 gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
          Length = 632

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 344/590 (58%), Gaps = 56/590 (9%)

Query: 301 QLHSQVLKNGIDFDHN---IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           Q+H+ +L++ +        +   L  AY+  GK+  +  +F    +  D+  +TA I+  
Sbjct: 47  QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID-PDLFLFTAAINTA 105

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY-------- 409
             NG  D A   + Q+    + PN FT+S +L +    S   +H H++K           
Sbjct: 106 SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVAT 165

Query: 410 -----------------------EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
                                  E+S    TA++  Y K+G ++ A  +F+ + E+DIV+
Sbjct: 166 GLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVS 225

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           W+ M+ GYAQ G    A+ ++++L +EG  KP+E T  + ++AC+    A+E G+  H  
Sbjct: 226 WNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ-IGALETGRWIHVF 284

Query: 506 --SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
             S + +LN  +C  + L+ MYSK G++E A  VF    ++D+V+WN+MI GYA HG+++
Sbjct: 285 VKSSRIRLNVKVC--TGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342

Query: 564 KALEVFKEMRR-QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            AL +F EM+    L+   ITFIG + AC HAGLV+EG + F+ M  E+ I P +EHY C
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHD 668
           +V L  RAG L++A + I  M   A + +W +VL +C+L              I L   +
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           S IYVLLSN+YA+ G ++  A+VR LM ++ + KE G S IE++NK + F AGD  H +S
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKS 522

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            +IY+ L ++S R+K  GY P+T+ VLQD+++  KE  L  HSERLAIA+GL++T  G+P
Sbjct: 523 KEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSP 582

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+I KNLRVC DCHTV KLISK+  R IV+RD NRFHHF +G CSCGD+W
Sbjct: 583 LKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 162/400 (40%), Gaps = 70/400 (17%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR-------------- 125
           T SS+LK+C        G+ +H   +K G   D  V+T LVD+Y +              
Sbjct: 132 TFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187

Query: 126 -----------------TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
                              NVE  R +FD M E ++VSW  ++ GYA++   +  L LF 
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247

Query: 169 RMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
           ++  EG  KP+  T    L   +  G + T   +H  V  +   +   VC  LI MY K 
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSV 286
             + +A  VF+    +D + WN+M+AGY  +    +A   FN M G+ G + T  TF+  
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367

Query: 287 IKLCATTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++ CA    +    R   S   + GI         L+    + G+++ A +    M    
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHII 405
           D V W++++      G+  L  +F                         V   ++  ++I
Sbjct: 428 DSVLWSSVL------GSCKLHGDF-------------------------VLGKEIAEYLI 456

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
             N + S  +   L N Y   G  +  AKV  L+ EK IV
Sbjct: 457 GLNIKNS-GIYVLLSNIYASVGDYEGVAKVRNLMKEKGIV 495



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 104/463 (22%), Positives = 197/463 (42%), Gaps = 79/463 (17%)

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           Y     +     +F    + ++  +T+ ++  + N + D+   L+ ++    I PN FTF
Sbjct: 74  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133

Query: 183 STVLGVLADEGIVATAVQVHTMVIK------------------NGGEVVTS--------- 215
           S++L   + +    +   +HT V+K                   GG+VV++         
Sbjct: 134 SSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189

Query: 216 ----VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                  A+I+ Y K   V  ARA+FD M +RD ++WN M+ GY  +    +A   F  +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249

Query: 272 GLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
              G  +    T V+ +  C+    L   R +H  V  + I  +  + TGL+  YSKCG 
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIIL 389
           +E+A  +F+     KD+V+W AMI+G+  +G    A+  F +M    G++P   T+    
Sbjct: 310 LEEAVLVFNDTPR-KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITF---- 364

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----DI 444
                                    +GT  L A    G+++E  ++FE + ++      I
Sbjct: 365 -------------------------IGT--LQACAHAGLVNEGIRIFESMGQEYGIKPKI 397

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
             +  +++   + G  + A   Y  + +  +  +   +SSV+ +C      V  GK+   
Sbjct: 398 EHYGCLVSLLGRAGQLKRA---YETIKNMNMDADSVLWSSVLGSCKLHGDFV-LGKEIAE 453

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
             I   + N+  +   L  +Y+  G+ E  ++V    +++ +V
Sbjct: 454 YLIGLNIKNS-GIYVLLSNIYASVGDYEGVAKVRNLMKEKGIV 495



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 4/226 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           ++LFD   +R+ V +N ++  Y +     +AL LF  +   G P     T+ + L  C  
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +     GR +H     S    +V V T L+D+Y +  ++E+   VF+D    ++V+W ++
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331

Query: 151 LSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKN 208
           ++GYA +  +   L LF+ MQ + G++P   TF   L   A  G+V   +++  +M  + 
Sbjct: 332 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEY 391

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           G +        L+S+  ++  ++ A      M  D DS+ W+S++ 
Sbjct: 392 GIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/585 (38%), Positives = 344/585 (58%), Gaps = 28/585 (4%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           T+ TF  +I  C     L     +H +++ +G+D D  + T L+  Y   G ++ A K+F
Sbjct: 73  TKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVF 132

Query: 339 SMMREMKDVVSWTAMISG-HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QP 393
              RE K +  W A+     + +   DL V  + QM   G+  N FTY+ +L A    + 
Sbjct: 133 DETRE-KTIFVWNAIFRALAMASRGEDLLV-LYGQMNWIGIPSNRFTYTYVLKACVVSEL 190

Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
           ++ P     ++HAHI++  YE    V T LL+ Y + G +  A+ VF  + +K+IV+WSA
Sbjct: 191 SICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSA 250

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVK--PNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           M+A YA+      A+++++ +  E     PN  T  SV+ AC A  AA+E GK  HA  +
Sbjct: 251 MIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQAC-ASLAALEHGKLVHAYVL 309

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +  L++ L V + L+TMY + G I +   VF   +KRD++SWNS+I  Y  HG  KKA++
Sbjct: 310 RRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQ 369

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F+ M  + +    ITFI V+ AC+HAGLV+E +  F+ M+N++ I+P MEHY+CMVD+ 
Sbjct: 370 IFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDIL 429

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYV 673
            RA  L++A+++I  M F    TVW ++L +CR              L  L+P ++  YV
Sbjct: 430 GRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYV 489

Query: 674 LLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYS 733
           LLS++YA +  W +  RVRK +  R ++K    SWIEVK K YS ++ +  +PQ  ++ +
Sbjct: 490 LLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCA 549

Query: 734 KLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVK 793
            L  L T +K+ GY P T+ V  D+D+E KE I+  HS +LA+AFGL+ T  G  ++I  
Sbjct: 550 FLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISN 609

Query: 794 NLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           NLR+C DCH  +K +SK   R+I++RD NRFH FK+G+CSCGDYW
Sbjct: 610 NLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 158/301 (52%), Gaps = 7/301 (2%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  VH   V SG  +D  ++T L+++Y    +V+   +VFD+  E  +  W ++    A 
Sbjct: 93  GVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAM 152

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLG--VLADEGI--VATAVQVHTMVIKNGGEV 212
               + +L L+ +M   GI  N FT++ VL   V+++  I  +    ++H  ++++G E 
Sbjct: 153 ASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEG 212

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V   L+ +Y +   V  A +VF  M D++ ++W++M+A Y  NE+ M+A E F  M 
Sbjct: 213 HVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMM 272

Query: 273 LAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           L   +   +  T VSV++ CA+   L   + +H+ VL+ G+D    +   L+  Y +CG+
Sbjct: 273 LEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGE 332

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +    ++F  M++ +DV+SW ++IS +  +G    A+  F  M   GV P+  T+  +L 
Sbjct: 333 ISTGQRVFDYMKK-RDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLC 391

Query: 391 A 391
           A
Sbjct: 392 A 392



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/388 (22%), Positives = 184/388 (47%), Gaps = 12/388 (3%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           P   TF  ++    ++  ++  V VH  ++ +G +    +   LI+MY     V  A  V
Sbjct: 72  PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK-- 294
           FD   ++    WN++           +    +  M   G    R T+  V+K C  ++  
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELS 191

Query: 295 --ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              LR  +++H+ +L++G +   ++ T L+  Y++ G +  AS +F  M + K++VSW+A
Sbjct: 192 ICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPD-KNIVSWSA 250

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVR--PNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
           MI+ + +N     A+  F  M  E     PN  T   +L A  +++  +    VHA++++
Sbjct: 251 MIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLR 310

Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
              + +  V   L+  Y + G +    +VF+ + ++D+++W+++++ Y   G  + A++I
Sbjct: 311 RGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQI 370

Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
           +  + + GV P+  TF +V+ AC+      E    F +   K +++  +   + +V +  
Sbjct: 371 FENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILG 430

Query: 527 KKGNIESASEVFKRQR-KRDLVSWNSMI 553
           +   ++ A E+ +    K     W S++
Sbjct: 431 RANRLDEAIELIQNMDFKPGPTVWGSLL 458



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 10/282 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG---- 89
           +FD + ++    +N +       S  ++ L L+  +  +G+P    T + VLK C     
Sbjct: 131 VFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSEL 190

Query: 90  --CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
             C      G+++H   ++ G+   V+V T+L+D+Y R   V     VF  M + N+VSW
Sbjct: 191 SICPLRK--GKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSW 248

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIK--PNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           +++++ YA+N+M  + LELF  M +E     PN  T  +VL   A    +     VH  V
Sbjct: 249 SAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYV 308

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           ++ G +    V N LI+MY +   +   + VFD M+ RD I+WNS+++ Y  + L  +A 
Sbjct: 309 LRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAI 368

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           + F NM   G   +  TF++V+  C+    +  A+ L   +L
Sbjct: 369 QIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESML 410



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 2/174 (1%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSV 84
           Y     S+F   P +N V ++ ++  Y ++ +  +AL LF  + +          T+ SV
Sbjct: 229 YVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSV 288

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L+ C  L     G+ VH   ++ G    + V  +L+ +Y R   +  G+RVFD M + +V
Sbjct: 289 LQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDV 348

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           +SW SL+S Y  + +  + +++F  M   G+ P+  TF TVL   +  G+V  A
Sbjct: 349 ISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEA 402


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/673 (33%), Positives = 366/673 (54%), Gaps = 59/673 (8%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI   L S  ++ A  +FD + + D  TW  +++G+  +    +A + ++ +        
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           +   +SV K CA + +L +A+++H   ++ G + D  +   L+  + KC  +  A  +F 
Sbjct: 77  KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF- 398
            M  +KDVVSWT+M   ++  G     +  F +M   G+R N  T S IL   PA + + 
Sbjct: 137 DM-VVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSIL---PACADYI 192

Query: 399 ----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
               +VH  I++   E +  V +AL+N Y     L +A  VF+ +  +DIV+W+ ML  Y
Sbjct: 193 KLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAY 252

Query: 455 -----------------------------------AQIGDTEGAVKIYRQLTSEGVKPNE 479
                                               Q G  E A+ I  ++   G+KPN 
Sbjct: 253 FLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNR 312

Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
            T  S +  CT   + +  GK+ H    +      + +++ALV +Y+K G++E +  VF 
Sbjct: 313 ITIVSALPGCTNLES-LRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFN 371

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
              ++D+V+WN+MI   + HG   ++L +F +M    +E + +TFIGV++ C+H+ L DE
Sbjct: 372 TMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADE 431

Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT--------- 650
           G   F+ M +EH I P  +HYSCMVD+ SRAG LE+A D I +MP   +A          
Sbjct: 432 GLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGAC 491

Query: 651 -VWRTV----LAACRLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
            V++ V    LAA +L  ++P ++  YVLLSN+      W E + +RK+M D+ + K  G
Sbjct: 492 RVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPG 551

Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
            SW++VKNK YSF+ GD S+ Q + IY  L+E+  +++  GY+P+T +VLQ++D E +E 
Sbjct: 552 RSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREE 611

Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
            L  HSERLA+AFG++ +     +++ KNLR+CGDCH  IKLI+K+    I+VRD+ RFH
Sbjct: 612 TLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFH 671

Query: 826 HFKEGLCSCGDYW 838
           HF++G C+C D+W
Sbjct: 672 HFRDGYCTCNDFW 684



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 218/467 (46%), Gaps = 48/467 (10%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
           S  L+   + + +++    +FD + E ++ +WT L+SG+ ++    + ++++  +    +
Sbjct: 14  SIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNV 73

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
           +P+ F   +V    A  G +  A ++H   I+ G      + NALI M+ K K V  AR 
Sbjct: 74  RPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARC 133

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           VFD M  +D ++W SM   YV   +  +    F  MGL G      T  S++  CA    
Sbjct: 134 VFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY-- 191

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM-- 353
           ++L R++H  +L+N ++ +  + + L+  Y+    ++ A  +F  M   +D+VSW  M  
Sbjct: 192 IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYH-RDIVSWNVMLT 250

Query: 354 ---------------------------------ISGHLQNGAIDLAVNFFCQMTREGVRP 380
                                            ISG +QNG  +LA+   C+M   G++P
Sbjct: 251 AYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKP 310

Query: 381 NGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           N  T   I++A P  +         ++H ++ +  + +  ++ TAL+  Y K G L+ + 
Sbjct: 311 NRIT---IVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSR 367

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            VF  +  KD+VAW+ M+   +  G    ++ ++ ++   GV+PN  TF  V++ C+   
Sbjct: 368 HVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQ 427

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
            A E    F++ S +  +       S +V + S+ G +E A +  ++
Sbjct: 428 LADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRK 474



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 196/418 (46%), Gaps = 41/418 (9%)

Query: 12  NPQTKQPPKSLRSPFYS---KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG 68
           N Q  Q  K +++   S   K+   LFD+ P+ +   +  L+  + +    ++A++++  
Sbjct: 8   NLQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYST 67

Query: 69  IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN 128
           +    +      L SV K C    D V  +++H + ++ GF +D+ +  +L+D++ +   
Sbjct: 68  LLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKF 127

Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
           V   R VFDDM   +VVSWTS+   Y    M  + + LF  M + GI+ NS T S++L  
Sbjct: 128 VNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPA 187

Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
            AD   +    +VH  +++N  E    V +AL++MY  S  ++ AR VFD M  RD ++W
Sbjct: 188 CAD--YIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSW 245

Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGAEL------------------------------ 278
           N M+  Y  N+ +      F+ M   G +L                              
Sbjct: 246 NVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQD 305

Query: 279 -----TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                 R T VS +  C   + LR  +++H  V ++    D  I T L++ Y+KCG +E 
Sbjct: 306 SGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLEL 365

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +  +F+ M   KDVV+W  MI  +  +G    ++  F +M   GV PN  T+  +L+ 
Sbjct: 366 SRHVFNTMPR-KDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSG 422



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%)

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
           C S  L+      G+++ A  +F +  + DL +W  +I G+ QHG  KKA++++  +  +
Sbjct: 12  CQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSR 71

Query: 576 DLEFDGITFIGVITACTHAG 595
           ++  D    + V  AC  +G
Sbjct: 72  NVRPDKFVLLSVAKACAASG 91


>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
 gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/481 (42%), Positives = 307/481 (63%), Gaps = 23/481 (4%)

Query: 380 PNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYV----KKGILDE 431
           PN FTY  +L A   +        VH  ++K  +    +V   L++ Y      +G ++ 
Sbjct: 8   PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A KVF+ + + D V+WSAM+ GY ++G +  A+ ++R++  +GV P+E T  SV++ACT 
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
              A+E GK   +   K ++   + +S+AL+ M++K G+++ A+ +F+  R+R++VSW S
Sbjct: 128 -LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTS 186

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           +I G A HG   +A+ VF+EM R  +  D + FIG+++AC+H+GLVD+G++YFD M  + 
Sbjct: 187 VIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDF 246

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----------- 660
            I P +EHY CMVD+  RAG++++A+  +  MP   +  VWRT++ ACR           
Sbjct: 247 SIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKI 306

Query: 661 ---LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS 717
              LI  +P   + YVLLSN+YA    W+++ R+R+ M+ + +KK  G + IE+ N+ Y 
Sbjct: 307 TRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELDNEIYE 366

Query: 718 FLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIA 777
           F+AGD SH QS +IY  ++E+   +K AGY P T+ VL DIDDE KE  L++HSE+LAIA
Sbjct: 367 FVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRHSEKLAIA 426

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           F L+ TP G  ++IVKNLRVC DCH+  K ISK+  R+IVVRD NRFHHFK GLCSC D+
Sbjct: 427 FALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNGLCSCRDF 486

Query: 838 W 838
           W
Sbjct: 487 W 487



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 159/309 (51%), Gaps = 20/309 (6%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC----GKMEDASKI 337
           T+  V+K CA    L L + +H  V+K G   + N++  L+  Y  C    G +E A K+
Sbjct: 12  TYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKV 71

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  M +  D VSW+AMI G+++ G    A+N F +M  +GV P+  T   +L+A   +  
Sbjct: 72  FDEMYK-SDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGA 130

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            +    V +++ K   +K+  +  AL++ + K G +D+A  +F  + E++IV+W++++ G
Sbjct: 131 LELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGG 190

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIK 508
            A  G    AV ++ ++   GV P++  F  +++AC+  S  V++GK++        SI 
Sbjct: 191 LAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSH-SGLVDKGKRYFDSMRKDFSIV 249

Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALE 567
            K+ +  C    +V M  + G ++ A +  +      + V W ++I     HG  K   +
Sbjct: 250 PKIEHYGC----MVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEK 305

Query: 568 VFKEMRRQD 576
           + +++ R +
Sbjct: 306 ITRQLIRNE 314



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 145/311 (46%), Gaps = 25/311 (8%)

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSK----MVRD 232
           PN FT+  VL   A  G +     VH  V+K G     +V N L+ MY   +     +  
Sbjct: 8   PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEF 67

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           AR VFD M   DS++W++M+ GYV      +A   F  M + G      T VSV+  C  
Sbjct: 68  ARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTG 127

Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
              L L + + S V K  +  +  +   L+  ++KCG ++ A+ +F  MRE +++VSWT+
Sbjct: 128 LGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRE-RNIVSWTS 186

Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT----- 407
           +I G   +G    AV  F +M R GV P+   +  +L+A         H+ ++       
Sbjct: 187 VIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACS-------HSGLVDKGKRYF 239

Query: 408 -NYEKSFSVGT------ALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAMLAGYAQIGD 459
            +  K FS+         +++   + G++ EA K V E+  + + V W  ++      G+
Sbjct: 240 DSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGE 299

Query: 460 TEGAVKIYRQL 470
            +   KI RQL
Sbjct: 300 LKLGEKITRQL 310



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 5/301 (1%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG----RRV 135
           T   VLK C  + +   G+ VH   +K GF  +VNV  +LV +Y      E G    R+V
Sbjct: 12  TYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKV 71

Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           FD+M +S+ VSW++++ GY R   +   + LF  MQ++G+ P+  T  +VL      G +
Sbjct: 72  FDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGAL 131

Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
                V + V K   +    + NALI M+ K   V  A  +F  M +R+ ++W S++ G 
Sbjct: 132 ELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGL 191

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
             +   +EA   F  M  +G       F+ ++  C+ +  +   ++    + K+      
Sbjct: 192 AMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPK 251

Query: 316 NIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
               G MV    + G +++A K    M    + V W  +I+    +G + L      Q+ 
Sbjct: 252 IEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLI 311

Query: 375 R 375
           R
Sbjct: 312 R 312



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 4/224 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD   + + V ++ ++  Y R     +A+NLF  ++  G+     T+ SVL  C  L
Sbjct: 69  RKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGL 128

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ V     K    ++V +S +L+D++ +  +V+    +F  M E N+VSWTS++
Sbjct: 129 GALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVI 188

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A +      + +F  M   G+ P+   F  +L   +  G+V    +    + K+   
Sbjct: 189 GGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKD-FS 247

Query: 212 VVTSV--CNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMV 252
           +V  +     ++ M  ++ +V++A      M  D + + W +++
Sbjct: 248 IVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLI 291


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/709 (33%), Positives = 386/709 (54%), Gaps = 25/709 (3%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ G+A   +    L  +  M  +G +P+ FTF  V+   A  G +      H MVIK G
Sbjct: 78  MIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLG 137

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E     CN+L++ Y K  +V DA  VFDGM  RD +TWN MV GYV+N L   A   F 
Sbjct: 138 LEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQ 197

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELR--LARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            M  A  E+   +   +  L A   E      +++H  V+++G++ D  + T L+  Y K
Sbjct: 198 EMHDA-LEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCK 256

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG++  A  +F+ M  ++ VV+W  MI G+  N   D A + F QM  EG++    T   
Sbjct: 257 CGEVAYARSVFATM-PLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAIN 315

Query: 388 ILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L A    + ++    VH ++++  +     + TALL  Y K G ++ + K+F  I  K 
Sbjct: 316 LLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKT 375

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+ M+A Y        A+ ++ +L ++ + P+ FT S+V+ A      ++   +Q H
Sbjct: 376 LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVL-LGSLRHCRQIH 434

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           +  I         + +A++ MY++ G++ ++ E+F +   +D++SWN+MI GYA HG  K
Sbjct: 435 SYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGK 494

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            ALE+F EM+   L+ +  TF+ V+TAC+ +GLVDEG  +F++M+ E+ + P +EHY CM
Sbjct: 495 TALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCM 554

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQPHDS 669
            DL  R G L + +  I  MP   ++ VW ++L              AA R+  L+  ++
Sbjct: 555 TDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNT 614

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             Y++LS+MYA  G W++  RVR LM ++ +++    S +E+ +   SF  GD+SH QS 
Sbjct: 615 GCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSR 674

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            I+   + LS ++K+     + SY +          + ++HS RLA+ FGL+++  G+P+
Sbjct: 675 TIHEVSDILSRKIKETDDTRNQSYPVPVA--TRTTTMPNKHSVRLAVVFGLISSEIGSPI 732

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            + KN+R+C  CH  +KLIS+   R IVV D+  +H F +G C CGDYW
Sbjct: 733 LVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 211/425 (49%), Gaps = 7/425 (1%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K C  L     GR  H   +K G   DV    SLV  Y +   VED  RVFD M
Sbjct: 109 TFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGM 168

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATA 198
              ++V+W  ++ GY  N +    L  F  M     ++ +S      L     E      
Sbjct: 169 PVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQG 228

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            ++H  VI++G E    V  +L+ MY K   V  AR+VF  M  R  +TWN M+ GY  N
Sbjct: 229 KEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALN 288

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           E   EAF+ F  M   G ++   T ++++  CA T+     R +H  V++        + 
Sbjct: 289 ERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLE 348

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y K GK+E + KIF  +   K +VSW  MI+ ++       A+  F ++  + +
Sbjct: 349 TALLEMYGKVGKVESSEKIFGKIAN-KTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPL 407

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            P+ FT S ++ A   +       Q+H++II   Y ++  +  A+L+ Y + G +  + +
Sbjct: 408 YPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASRE 467

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F+ +  KD+++W+ M+ GYA  G  + A++++ ++   G++PNE TF SV+ AC+  S 
Sbjct: 468 IFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSV-SG 526

Query: 495 AVEQG 499
            V++G
Sbjct: 527 LVDEG 531



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 176/375 (46%), Gaps = 13/375 (3%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGS 79
           FY+K       + +FD  P R+ V +N ++  Y  + L   AL  F  +   L +     
Sbjct: 151 FYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSV 210

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
            + + L  C   F  + G+++H   ++ G  +D+ V TSL+D+Y +   V   R VF  M
Sbjct: 211 GIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATM 270

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
               VV+W  ++ GYA N+  D   + F +M+ EG++    T   +L   A         
Sbjct: 271 PLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGR 330

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            VH  V++        +  AL+ MY K   V  +  +F  + ++  ++WN+M+A Y+  E
Sbjct: 331 SVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKE 390

Query: 260 LHMEAFETF---NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           ++ EA   F    N  L     T ST V    L  +   LR  RQ+HS ++  G   +  
Sbjct: 391 MYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGS---LRHCRQIHSYIIGLGYAENTL 447

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           I   ++  Y++ G +  + +IF  M   KDV+SW  MI G+  +G    A+  F +M   
Sbjct: 448 IMNAVLHMYARSGDVVASREIFDKMVS-KDVISWNTMIMGYAIHGQGKTALEMFDEMKYN 506

Query: 377 GVRPNGFTYSIILTA 391
           G++PN  T+  +LTA
Sbjct: 507 GLQPNESTFVSVLTA 521



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 133/262 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F   P R  V +N ++  Y  +    EA + F+ +R  GL +   T  ++L  C   
Sbjct: 264 RSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQT 323

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              ++GR VH   V+  F   V + T+L+++Y +   VE   ++F  +    +VSW +++
Sbjct: 324 ESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMI 383

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + Y   +M    + LF  +  + + P+ FT STV+      G +    Q+H+ +I  G  
Sbjct: 384 AAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYA 443

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T + NA++ MY +S  V  +R +FD M  +D I+WN+M+ GY  +     A E F+ M
Sbjct: 444 ENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEM 503

Query: 272 GLAGAELTRSTFVSVIKLCATT 293
              G +   STFVSV+  C+ +
Sbjct: 504 KYNGLQPNESTFVSVLTACSVS 525



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLK 86
           +  + +F +   +  V +N ++  Y    ++ EA+ LFL +  L  PL+    T+S+V+ 
Sbjct: 362 ESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL--LNQPLYPDYFTMSTVVP 419

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L      RQ+H   +  G+A +  +  +++ +Y R+ +V   R +FD M   +V+S
Sbjct: 420 AFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVIS 479

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           W +++ GYA +      LE+F  M+  G++PN  TF +VL   +  G+V
Sbjct: 480 WNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLV 528



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           S +LV   + +G ++ A E     R  D    N MI G+A  G    AL  ++ M     
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLE 634
             D  TF  V+  C   G +DEG+    +++    EH +Y      + +V  Y++ G++E
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTC----NSLVAFYAKLGLVE 159

Query: 635 KAMDIINRMP 644
            A  + + MP
Sbjct: 160 DAERVFDGMP 169


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/592 (37%), Positives = 347/592 (58%), Gaps = 22/592 (3%)

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           M+A ++  + GL       +T+  +IK C + + +     +   +  NG      +   L
Sbjct: 46  MKAMDSLQSHGLWADS---ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVL 102

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           +  Y K   + DA ++F  M + ++V+SWT MIS + +      A+     M R+ VRPN
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161

Query: 382 GFTYSIILTAQPAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            +TYS +L +   +S  + +H  IIK   E    V +AL++ + K G  ++A  VF+ + 
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
             D + W++++ G+AQ   ++ A+++++++   G    + T +SV+ ACT   A +E G 
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL-ALLELGM 280

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q H   +K   +  L +++ALV MY K G++E A  VF + ++RD+++W++MI G AQ+G
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
           ++++AL++F+ M+    + + IT +GV+ AC+HAGL+++G  YF  M   + I P  EHY
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398

Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQP 666
            CM+DL  +AG L+ A+ ++N M     A  WRT+L ACR+              I+L P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458

Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
            D+  Y LLSN+YA +  W     +R  M DR +KKE G SWIEV  + ++F+ GD SHP
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518

Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
           Q  ++  KL +L  RL   GY P+T++VLQD++ E  E  L  HSE+LA+AFGL+  P  
Sbjct: 519 QIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIE 578

Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             ++I KNLR+CGDCH   KL SKLE R IV+R   R+HHF++G CSCGDYW
Sbjct: 579 KVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 221/450 (49%), Gaps = 38/450 (8%)

Query: 17  QPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL 76
           +P  +LR   YS  DQ+L          E+ RL ++  RD     A+     ++  GL  
Sbjct: 12  RPVVTLRCS-YSSTDQTLL-------LSEFTRLCYQ--RDL--PRAMKAMDSLQSHGLWA 59

Query: 77  FGSTLSSVLKTCGCLFDHVFGRQVH-----CECVK-SGFARDVNVSTSLVDLYMRTNNVE 130
             +T S ++K C      +  R VH     C  +  +G    + +   L+++Y++ N + 
Sbjct: 60  DSATYSELIKCC------ISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLN 113

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
           D  ++FD M + NV+SWT+++S Y++ K++ + LEL   M  + ++PN +T+S+VL    
Sbjct: 114 DAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173

Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
               ++    +H  +IK G E    V +ALI ++ K     DA +VFD M   D+I WNS
Sbjct: 174 G---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
           ++ G+  N     A E F  M  AG    ++T  SV++ C     L L  Q H  ++K  
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-- 288

Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
            D D  +   L+  Y KCG +EDA ++F+ M+E +DV++W+ MISG  QNG    A+  F
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLF 347

Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT------ALLNAYV 424
            +M   G +PN  T   +L A       +   +  ++  +K + +         +++   
Sbjct: 348 ERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS-MKKLYGIDPVREHYGCMIDLLG 406

Query: 425 KKGILDEAAKVF-ELIDEKDIVAWSAMLAG 453
           K G LD+A K+  E+  E D V W  +L  
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/661 (34%), Positives = 377/661 (57%), Gaps = 44/661 (6%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G+ +H + +KS  +  V ++ SLV+LY +   + + + VF+ +   +VVSW  +++GY++
Sbjct: 25  GKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQ 83

Query: 157 N--KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           +    +  V+ELF RM+ E   PN+ TF+ V    +     A     H + IK       
Sbjct: 84  HGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV 143

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V ++L++MY K+ +  +AR VFD M +R+S++W +M++GY + +L  EA   F  M   
Sbjct: 144 FVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE 203

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                   F SV+      + +   +Q+H   +KNG+    ++   L+  Y+KCG ++DA
Sbjct: 204 EEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDA 263

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA--- 391
            + F    + K+ ++W+AMI+G  Q+G  D A+  F  M   G+RP+ FT+  ++ A   
Sbjct: 264 LQTFETSSD-KNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSD 322

Query: 392 -QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
              A    QVH +++K  +E    V TAL++ Y K   + +A K F+ + E DIV W++M
Sbjct: 323 LGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSM 382

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
           + GY Q G+ E A+ +Y ++  EG+ PNE T +SV+ AC++  AA+EQGKQ HA ++K  
Sbjct: 383 IGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSL-AALEQGKQIHARTVKYG 441

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
               + + SAL TMY+K G ++  + VF+R   RD++SWN+MI G +Q+G  K+ALE+F+
Sbjct: 442 FGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFE 501

Query: 571 EMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
           EM+ +  + D +TF+ +++AC+H GLV+ G  YF +M +E  + P +EHY+CMVD+ SRA
Sbjct: 502 EMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRA 561

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERAR 690
           G L++A++      F  SAT+               H               G W++  R
Sbjct: 562 GKLKEAIE------FTESATI--------------DH---------------GMWEDVER 586

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           VR++M  R V KE G SWIE+K+  + F+  D  HPQ   I+ +L +LS ++KD GY+P 
Sbjct: 587 VRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPA 646

Query: 751 T 751
           T
Sbjct: 647 T 647



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/514 (30%), Positives = 269/514 (52%), Gaps = 17/514 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCR--DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +F+R   ++ V +N ++  Y +   S     + LF  +R         T + V      L
Sbjct: 62  VFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTL 121

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D   GR  H   +K    RDV V +SL+++Y +     + R+VFD M E N VSW +++
Sbjct: 122 VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMI 181

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGYA  K+    L LF  M+ E    N F F++VL  L    +V    Q+H + +KNG  
Sbjct: 182 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 241

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            + SV NAL++MY K   + DA   F+   D++SITW++M+ G   +    +A + F++M
Sbjct: 242 SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSM 301

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            L+G   +  TFV VI  C+        +Q+H  +LK G +    + T L+  Y+KC  +
Sbjct: 302 HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            DA K F  ++E  D+V WT+MI G++QNG  + A++ + +M  EG+ PN  T + +L A
Sbjct: 362 VDARKGFDYLQE-PDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKA 420

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
             +++      Q+HA  +K  +     +G+AL   Y K G L +   VF  +  +D+++W
Sbjct: 421 CSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISW 480

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG-----KQF 502
           +AM++G +Q G  + A++++ ++  EG KP+  TF ++++AC+     VE+G       F
Sbjct: 481 NAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACS-HMGLVERGWGYFRMMF 539

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
               +  ++ +  C    +V + S+ G ++ A E
Sbjct: 540 DEFGMDPRVEHYAC----MVDILSRAGKLKEAIE 569



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 201/364 (55%), Gaps = 9/364 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLP----LFGSTLSSVLKT 87
           + +FD  P+RN V +  ++  Y    L  EAL LF  +RR        +F S LS++  T
Sbjct: 163 RKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSAL--T 220

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
              L ++  G+Q+HC  VK+G    V+V  +LV +Y +  +++D  + F+  ++ N ++W
Sbjct: 221 LPELVNN--GKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITW 278

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +++++G A++  +D+ L+LF  M + GI+P+ FTF  V+   +D G      QVH  ++K
Sbjct: 279 SAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK 338

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G E    V  AL+ MY K   + DAR  FD +++ D + W SM+ GYV N  + +A   
Sbjct: 339 LGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSL 398

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           +  M + G      T  SV+K C++   L   +Q+H++ +K G   +  I + L   Y+K
Sbjct: 399 YGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAK 458

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG ++D + +F  M   +DV+SW AMISG  QNG    A+  F +M  EG +P+  T+  
Sbjct: 459 CGCLKDGTLVFRRM-PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVN 517

Query: 388 ILTA 391
           IL+A
Sbjct: 518 ILSA 521


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/656 (35%), Positives = 348/656 (53%), Gaps = 91/656 (13%)

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +Q+H  +I +G +   S+ + LI++Y        AR+VFD   +   I WNSM+  Y  +
Sbjct: 69  LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRS 127

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           + + EA E +  M                                  V K G++ D  I 
Sbjct: 128 KQYNEALEMYYCM----------------------------------VEKGGLERDVFIG 153

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
            GL+  YSK G ++ A ++F  M + +DVV+W AMI+G  Q+    +A   F QM  +  
Sbjct: 154 AGLVDMYSKMGDLKRAREVFDKMPK-RDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQ-- 210

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
                                              S GT ++  Y   G   E   V EL
Sbjct: 211 --------------------------------DDVSWGT-MMAGYAHNGCFVE---VLEL 234

Query: 439 IDEKDI--VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
            D+  +  V W+ ++A Y Q G  + A+  + Q+  E   PN  TF SV+ A  A  AA 
Sbjct: 235 FDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPA-AAYLAAF 293

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
            +G  FHAC I+    +   V ++L+ MY+K G ++ + ++F     +D VSWN+M+ GY
Sbjct: 294 REGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGY 353

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           A HGH  +A+ +F  M+   ++ D ++F+ V++AC HAGLV+EG++ F  M +++HI P 
Sbjct: 354 AVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPD 413

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LI 662
           +EHY+CMVDL  RAG+ ++ +  I  MP    A VW  +L +CR              L+
Sbjct: 414 LEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV 473

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            L+P + A +V+LS++YA +G W +  + R  MND  +KK  G SW+E+KNK ++F  GD
Sbjct: 474 KLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGD 533

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA 782
            SHPQ   ++     L  +++  GY PD S VLQ++++E KE  L  HSERLAI F L+ 
Sbjct: 534 KSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLN 593

Query: 783 TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           TP G+ +QIVKNLRVC DCHT  K ISK+  R I+VRD  RFHHF++G+CSC DYW
Sbjct: 594 TPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 199/453 (43%), Gaps = 52/453 (11%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q+H + + SGF    ++ T L++LY   +  +  R VFD     + + W S++  Y R+K
Sbjct: 70  QIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSK 128

Query: 159 MNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
             +  LE+++ M +  G++ + F  + ++ + +  G +  A +V   + K   +VV    
Sbjct: 129 QYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR--DVVA--W 184

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           NA+I+   +S+    AR VFD M D+D ++W +M+AGY  N   +E  E F+ M L    
Sbjct: 185 NAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVT 244

Query: 278 L------------------------------TRSTFVSVIKLCATTKELRLARQLHSQVL 307
                                             TFVSV+   A     R     H+ ++
Sbjct: 245 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 304

Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           + G   +  +   L+  Y+KCG+++ + K+F+ M + KD VSW AM+SG+  +G  D A+
Sbjct: 305 QMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM-DHKDTVSWNAMLSGYAVHGHGDRAI 363

Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNA 422
             F  M    V+ +  ++  +L+A       +      H+   K + +        +++ 
Sbjct: 364 ALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDL 423

Query: 423 YVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE-GAVKIYRQLTSEGVKPNEF 480
             + G+ DE     +++  E D   W A+L       + + G V +   +  E   P  F
Sbjct: 424 LGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHF 483

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
              S I A        + G+   A   ++K+N+
Sbjct: 484 VVLSSIYA--------QSGRWADAGKARSKMND 508



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 156/358 (43%), Gaps = 42/358 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLP---LFGSTLSSVLKT 87
           +S+FD +P  + + +N ++  Y R   + EAL ++   + + GL      G+ L  +   
Sbjct: 103 RSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSK 162

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
            G   D    R+V  +  K    RDV    +++    ++ +    RRVFD M + + VSW
Sbjct: 163 MG---DLKRAREVFDKMPK----RDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSW 215

Query: 148 TSLLSGYARNKMNDRVLELF------------------------------HRMQVEGIKP 177
            ++++GYA N     VLELF                              H+M++E   P
Sbjct: 216 GTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP 275

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           NS TF +VL   A        +  H  +I+ G    T V N+LI MY K   +  +  +F
Sbjct: 276 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLF 335

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
           + M+ +D+++WN+M++GY  +     A   F+ M  +  ++   +FVSV+  C     + 
Sbjct: 336 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVE 395

Query: 298 LARQL-HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
             R++ HS   K  I  D      ++    + G  ++      +M    D   W A++
Sbjct: 396 EGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL 453


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/650 (34%), Positives = 363/650 (55%), Gaps = 23/650 (3%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           DV +    ++  +++  + D   +FD M   NVV+WTS++SGY RN   +  L +F  M 
Sbjct: 47  DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
             G+ PN F  +  L   AD G +    QVH++ ++ G      + + LI MY +   + 
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
            A+ VFD M+  D + + S+++ +  N     A E    M   G +    T  +++  C 
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNI--RTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
                 L +Q+H  ++K       ++   T L+  YS+ G+ + A  +F  +   K+VVS
Sbjct: 227 RV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL-HCKNVVS 281

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-PFQVHAHIIKTN 408
           W +M+  ++++G ++ A+  F  M  EGV PN F  SI+L A  ++    Q+H   IK +
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHD 341

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                 V  ALL+ Y + G+++E   +   I+  D+V+W+  ++   Q G  E A+ +  
Sbjct: 342 LITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLC 401

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+ SEG  PN + FSSV+++C A  A+++QG QFH  ++K   ++ +C  +AL+ MYSK 
Sbjct: 402 QMHSEGFTPNGYAFSSVLSSC-ADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKC 460

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G + SA   F      D+ SWNS+I G+AQHG   KALEVF +MR   ++ D  TF+GV+
Sbjct: 461 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 520

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
             C H+G+V+EG+ +F +M++++   P   HY+CM+D+  R G  ++A+ +IN MPF   
Sbjct: 521 MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 580

Query: 649 ATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A +W+T+LA+C              RL+ L   DSA YVL+SN+YA  G W++  +VR+ 
Sbjct: 581 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 640

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           M++  VKK+AG SWIE+ N+ ++F + D+SHP S+ IY  L EL   ++D
Sbjct: 641 MDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 263/534 (49%), Gaps = 17/534 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFDR P++N V +  ++  Y R+   + AL +F  +   G+       ++ L  C  L  
Sbjct: 70  LFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGA 129

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G QVH   V++GFA D  + + L+++Y R  ++   + VFD M+  +VV +TSL+S 
Sbjct: 130 LRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA 189

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + RN   +   E   +M  +G+KPN  T +T+L             Q+H  +IK  G   
Sbjct: 190 FCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR----VLGQQIHGYLIKKIGLRS 245

Query: 214 TSV--CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            SV    ALI  Y ++   + A+AVFD +  ++ ++W SM+  Y+ +    EA + F +M
Sbjct: 246 QSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDM 305

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +        V+  C +   + L RQLH   +K+ +  D  +   L+  Y + G +
Sbjct: 306 ISEGVDPNEFALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLV 362

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E+   + + + E  D+VSWT  IS + QNG  + A+   CQM  EG  PNG+ +S +L++
Sbjct: 363 EELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSS 421

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              V+      Q H   +K   +     G AL+N Y K G +  A   F+++   D+ +W
Sbjct: 422 CADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSW 481

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++++ G+AQ GD   A++++ ++ S G+KP++ TF  V+  C   S  VE+G+ F    I
Sbjct: 482 NSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNH-SGMVEEGELFFRLMI 540

Query: 508 -KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
            +     A    + ++ M  + G  + A  +      + D + W +++     H
Sbjct: 541 DQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 218/491 (44%), Gaps = 54/491 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR    + V Y  L+  +CR+   + A    + + + GL     T++++L  C   
Sbjct: 169 KEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC--- 225

Query: 92  FDHVFGRQVHCECVKSGFARDVNV--STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
              V G+Q+H   +K    R  +V  ST+L+D Y R    +  + VFD ++  NVVSW S
Sbjct: 226 -PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCS 284

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++  Y R+   +  L++F  M  EG+ PN F  S VLG     G +    Q+H   IK+ 
Sbjct: 285 MMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHD 341

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V NAL+SMY ++ +V +  A+ + +E+ D ++W + ++    N    +A     
Sbjct: 342 LITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLC 401

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G       F SV+  CA    L    Q H   LK G D +      L+  YSKCG
Sbjct: 402 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 461

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +M  A   F +M    DV SW ++I GH Q+G  + A+  F +M   G++P+  T+  +L
Sbjct: 462 QMGSARLAFDVM-HTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 520

Query: 390 TA---QPAVSPFQVHAHIIKTNYEKSFSVGTA----LLNAYVKKGILDEAAKVF-ELIDE 441
                   V   ++   ++   Y  SF+   +    +++   + G  DEA ++  ++  E
Sbjct: 521 MGCNHSGMVEEGELFFRLMIDQY--SFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578

Query: 442 KDIVAWSAMLAG----------------------------------YAQIGDTEGAVKIY 467
            D + W  +LA                                   YA  G+ E A K+ 
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638

Query: 468 RQLTSEGVKPN 478
           R++   GVK +
Sbjct: 639 RRMDETGVKKD 649



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 8/270 (2%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYS+  +     ++FD    +N V +  ++  Y RD   +EAL +F  +   G+      
Sbjct: 257 FYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA 316

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           LS VL  CG +     GRQ+HC  +K     D+ VS +L+ +Y RT  VE+   + + + 
Sbjct: 317 LSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE 373

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             ++VSWT+ +S   +N   ++ + L  +M  EG  PN + FS+VL   AD   +   +Q
Sbjct: 374 NPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ 433

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
            H + +K G +      NALI+MY K   +  AR  FD M   D  +WNS++ G+  +  
Sbjct: 434 FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGD 493

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             +A E F+ M   G +   STF+ V+  C
Sbjct: 494 ANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/690 (32%), Positives = 390/690 (56%), Gaps = 23/690 (3%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMR--TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           HC+  KSG    + V+ +++  Y +  + ++    ++FD+M   + V+W ++++GY  + 
Sbjct: 22  HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
                 E    M+  G + + +TF ++L  +A         QVH++++K G E      +
Sbjct: 82  NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGS 141

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL+ MY K + V DA  VF GM  R+ ++WN+++ G+V       AF   + M   G  +
Sbjct: 142 ALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRV 201

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
              TF  ++ L    K  +L  QLH +++K+G++F + +    + AYS+CG +EDA ++F
Sbjct: 202 EDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVF 261

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-- 396
                 +D+V+W +M+  +L +   + A N F +M   G  P+ +TY+ +++A  A +  
Sbjct: 262 DGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHK 321

Query: 397 --PFQVHAHIIKTNYEKSFSVGTALLNAYVK--KGILDEAAKVFELIDEKDIVAWSAMLA 452
                 HA +IK   E+S ++  AL+  Y+K     ++ A  +F  +  KD V+W+++L 
Sbjct: 322 NYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILT 381

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G++Q+G +E A+K++  + S   + +++ +S+V+ +C+   A ++ G+Q H  ++K   +
Sbjct: 382 GFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCS-DLAILQLGQQIHLLTVKTGFD 440

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           +   V+S+L+ MYSK G IE A + F+   K   ++WNS++  YAQHG    AL++F  M
Sbjct: 441 SNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIM 500

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R ++++ D +TF+ V+TAC+H GLV++G+     M +++ I P MEHY+C VDL+ RAG 
Sbjct: 501 REREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGY 560

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNM 678
           LE+A  +I+ MPF  +A V +T+L ACR              L+ ++P +   YV+LSNM
Sbjct: 561 LEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNM 620

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           Y     W ++A V +LM +RKVKK  G+SWIEVKN+ ++F A D SHP S  +Y  L EL
Sbjct: 621 YGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILGEL 680

Query: 739 STRLKDAGYKPDTSYVLQDIDDEHKEAILS 768
              +K          ++ D++  +  + LS
Sbjct: 681 MEEMKRLHSLASFDSLMHDVNHMYPSSDLS 710



 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 235/474 (49%), Gaps = 9/474 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P ++ V +N ++  Y        A      ++R G    G T  S+LK       
Sbjct: 58  LFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACR 117

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           H  G+QVH   VK G+ + V   ++L+D+Y +   VED   VF  M   N VSW +L+ G
Sbjct: 118 HDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDG 177

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + +    D    L   MQ EG++    TF+ +L +L  +      +Q+H  +IK+G E  
Sbjct: 178 FVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFY 237

Query: 214 TSVCNALISMYLKSKMVRDARAVFDG-MEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
            ++CNA ++ Y +  ++ DA+ VFDG +  RD +TWNSM+  Y+ ++   +AF  F  M 
Sbjct: 238 NALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQ 297

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK-- 330
             G E    T+  VI  C         +  H+ V+K G++    I   L+  Y K     
Sbjct: 298 GFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKS 357

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           ME A  +F  M+  KD VSW ++++G  Q G  + A+  F  M       + + YS +L 
Sbjct: 358 MEAALNLFHSMKS-KDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLR 416

Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           +   ++      Q+H   +KT ++ +  V ++L+  Y K GI+++A K FE   ++  + 
Sbjct: 417 SCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSIT 476

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
           W++++  YAQ G  + A+ ++  +    VK +  TF +V+ AC+     VEQG+
Sbjct: 477 WNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACS-HVGLVEQGR 529


>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
          Length = 635

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/612 (38%), Positives = 346/612 (56%), Gaps = 60/612 (9%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           LT      ++  CAT   LR   +LH+  ++ G+D D  +   L  AY+   +++     
Sbjct: 33  LTADRVAGLLTGCAT---LRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLD---LT 86

Query: 338 FSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +++R   D   V +T+ I  H   G    A+    +M   G+ P   T S  L A   +
Sbjct: 87  VTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGL 146

Query: 396 SPFQ-VHAHIIK-----TNYEKSFSVG--------------------------TALLNAY 423
           +  + +HA+  K      +Y  +  +G                          TA+L  Y
Sbjct: 147 ALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCY 206

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K G LD+A ++F+ +  KD + W+AM+ GY Q G    A++++R +   GV P+E    
Sbjct: 207 AKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAII 266

Query: 484 SVINACTAPSAAVEQGKQFHAC---SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
             ++A  A     E G+  H+    S + +LN    V +AL+ MY K G++E A  VF  
Sbjct: 267 LALSA-VAQLGTAESGRWLHSYVKNSRRVQLNAR--VGTALIDMYCKCGSLEDAVSVFNS 323

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              +D+V WN+MI GYA HG ++KALE+F ++R Q L    ITFIG++ AC+H+GLVDEG
Sbjct: 324 IGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEG 383

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            Q+F  M  E+ I P +EHY CMVDL  RAG++E+A  ++  M  A    +W ++LAACR
Sbjct: 384 HQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACR 443

Query: 661 L-----ISLQPHD---------SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
           L     +  Q  D         S +Y+LLSN+YAA G+W+E ARVR +M    ++KE G 
Sbjct: 444 LHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGC 503

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           S IEV  K Y F+AGD+SHP++++IY+ LE+++  +K+ G+ P T  VL D+D+  KE  
Sbjct: 504 SAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKA 563

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           L+ HSE+LA+AFGL++T  G  ++IVKNLR C DCH V+KLISK+  R IV RD NRFHH
Sbjct: 564 LAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHH 623

Query: 827 FKEGLCSCGDYW 838
           F +G C+CGDYW
Sbjct: 624 FVDGSCTCGDYW 635



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 191/477 (40%), Gaps = 79/477 (16%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H   V++G   D  V   L   Y  ++ ++    +     +   V +TS +  ++   
Sbjct: 53  ELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRG 112

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGV------------------LADEGIVATAVQ 200
           ++   L L   M   G+ P S T S+ L                    LA +  VATA+ 
Sbjct: 113 LHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLALGRALHAYAFKLALAGDSYVATAL- 171

Query: 201 VHTMVIKNGGEVVTS-------------VCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
               +   GG+   +                A+++ Y K   + DAR +FDGM  +D I 
Sbjct: 172 --LGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFIC 229

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WN+M+ GY  +    EA   F  M  +G +      +  +   A        R LHS V 
Sbjct: 230 WNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV- 288

Query: 308 KNG--IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           KN   +  +  + T L+  Y KCG +EDA  +F+ + + KD+V W AMI+G+  +G    
Sbjct: 289 KNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGD-KDIVVWNAMINGYAMHGDSRK 347

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
           A+  F Q+  +G+ P   T+                                 LLNA   
Sbjct: 348 ALEMFSQLRSQGLWPTDITF-------------------------------IGLLNACSH 376

Query: 426 KGILDEAAKVFELIDEK-----DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
            G++DE  + F+ ++E+      I  +  M+    + G  E A  + + +T   + P+  
Sbjct: 377 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMT---IAPDTV 433

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
            + S++ AC      +  G+Q     +   L N+  +   L  +Y+  GN E  + V
Sbjct: 434 MWVSLLAACRL-HKNMALGQQIADYLVAGGLANS-GMYILLSNIYAAVGNWEEVARV 488



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 132/317 (41%), Gaps = 38/317 (11%)

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG 132
           GL     TLSS L  C  L     GR +H    K   A D  V+T+L+ +Y R  + +  
Sbjct: 128 GLIPTSHTLSSSLPACHGL---ALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAA 184

Query: 133 RRVFDDMNESNVVS-------------------------------WTSLLSGYARNKMND 161
           R +FD+M + +VV                                W +++ GY ++   +
Sbjct: 185 RALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPN 244

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS--VCNA 219
             L LF  M   G+ P+       L  +A  G   +   +H+ V KN   V  +  V  A
Sbjct: 245 EALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV-KNSRRVQLNARVGTA 303

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI MY K   + DA +VF+ + D+D + WN+M+ GY  +    +A E F+ +   G   T
Sbjct: 304 LIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPT 363

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIF 338
             TF+ ++  C+ +  +    Q    + +           G MV    + G +E+A  + 
Sbjct: 364 DITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLV 423

Query: 339 SMMREMKDVVSWTAMIS 355
             M    D V W ++++
Sbjct: 424 QSMTIAPDTVMWVSLLA 440



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 135/317 (42%), Gaps = 45/317 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P ++F+ +N ++  Y +     EAL LF  + R G+      +   L     L
Sbjct: 216 RELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQL 275

Query: 92  FDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                GR +H     S   + +  V T+L+D+Y +  ++ED   VF+ + + ++V W ++
Sbjct: 276 GTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAM 335

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++GYA +  + + LE+F +++ +G+ P   TF  +L   +  G+V    Q          
Sbjct: 336 INGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQ---------- 385

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT-----WNSMVAGYVTNELHMEAF 265
                                     F  ME+  +I      +  MV       L  EAF
Sbjct: 386 -------------------------FFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAF 420

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
               +M +A   +    +VS++  C   K + L +Q+   ++  G+  +  +   L   Y
Sbjct: 421 HLVQSMTIAPDTV---MWVSLLAACRLHKNMALGQQIADYLVAGGL-ANSGMYILLSNIY 476

Query: 326 SKCGKMEDASKIFSMMR 342
           +  G  E+ +++ SMM+
Sbjct: 477 AAVGNWEEVARVRSMMK 493


>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
 gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
 gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
          Length = 634

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/612 (38%), Positives = 346/612 (56%), Gaps = 60/612 (9%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           LT      ++  CAT   LR   +LH+  ++ G+D D  +   L  AY+   +++     
Sbjct: 32  LTADRVAGLLTGCAT---LRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLD---LT 85

Query: 338 FSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
            +++R   D   V +T+ I  H   G    A+    +M   G+ P   T S  L A   +
Sbjct: 86  VTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHGL 145

Query: 396 SPFQ-VHAHIIK-----TNYEKSFSVG--------------------------TALLNAY 423
           +  + +HA+  K      +Y  +  +G                          TA+L  Y
Sbjct: 146 ALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCY 205

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K G LD+A ++F+ +  KD + W+AM+ GY Q G    A++++R +   GV P+E    
Sbjct: 206 AKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAII 265

Query: 484 SVINACTAPSAAVEQGKQFHAC---SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
             ++A  A     E G+  H+    S + +LN    V +AL+ MY K G++E A  VF  
Sbjct: 266 LALSA-VAQLGTAESGRWLHSYVKNSRRVQLNAR--VGTALIDMYCKCGSLEDAVSVFNS 322

Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
              +D+V WN+MI GYA HG ++KALE+F ++R Q L    ITFIG++ AC+H+GLVDEG
Sbjct: 323 IGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEG 382

Query: 601 QQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
            Q+F  M  E+ I P +EHY CMVDL  RAG++E+A  ++  M  A    +W ++LAACR
Sbjct: 383 HQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACR 442

Query: 661 L-----ISLQPHD---------SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGY 706
           L     +  Q  D         S +Y+LLSN+YAA G+W+E ARVR +M    ++KE G 
Sbjct: 443 LHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGC 502

Query: 707 SWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
           S IEV  K Y F+AGD+SHP++++IY+ LE+++  +K+ G+ P T  VL D+D+  KE  
Sbjct: 503 SAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQTELVLHDLDEVTKEKA 562

Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
           L+ HSE+LA+AFGL++T  G  ++IVKNLR C DCH V+KLISK+  R IV RD NRFHH
Sbjct: 563 LAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKITGRKIVFRDRNRFHH 622

Query: 827 FKEGLCSCGDYW 838
           F +G C+CGDYW
Sbjct: 623 FVDGSCTCGDYW 634



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 191/477 (40%), Gaps = 79/477 (16%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           ++H   V++G   D  V   L   Y  ++ ++    +     +   V +TS +  ++   
Sbjct: 52  ELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRG 111

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGV------------------LADEGIVATAVQ 200
           ++   L L   M   G+ P S T S+ L                    LA +  VATA+ 
Sbjct: 112 LHLAALALLSEMLGRGLIPTSHTLSSSLPACHGLALGRALHAYAFKLALAGDSYVATAL- 170

Query: 201 VHTMVIKNGGEVVTS-------------VCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
               +   GG+   +                A+++ Y K   + DAR +FDGM  +D I 
Sbjct: 171 --LGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFIC 228

Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
           WN+M+ GY  +    EA   F  M  +G +      +  +   A        R LHS V 
Sbjct: 229 WNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV- 287

Query: 308 KNG--IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           KN   +  +  + T L+  Y KCG +EDA  +F+ + + KD+V W AMI+G+  +G    
Sbjct: 288 KNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGD-KDIVVWNAMINGYAMHGDSRK 346

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
           A+  F Q+  +G+ P   T+                                 LLNA   
Sbjct: 347 ALEMFSQLRSQGLWPTDITF-------------------------------IGLLNACSH 375

Query: 426 KGILDEAAKVFELIDEK-----DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
            G++DE  + F+ ++E+      I  +  M+    + G  E A  + + +T   + P+  
Sbjct: 376 SGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMT---IAPDTV 432

Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
            + S++ AC      +  G+Q     +   L N+  +   L  +Y+  GN E  + V
Sbjct: 433 MWVSLLAACRL-HKNMALGQQIADYLVAGGLANS-GMYILLSNIYAAVGNWEEVARV 487



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 132/317 (41%), Gaps = 38/317 (11%)

Query: 73  GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDG 132
           GL     TLSS L  C  L     GR +H    K   A D  V+T+L+ +Y R  + +  
Sbjct: 127 GLIPTSHTLSSSLPACHGL---ALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAA 183

Query: 133 RRVFDDMNESNVVS-------------------------------WTSLLSGYARNKMND 161
           R +FD+M + +VV                                W +++ GY ++   +
Sbjct: 184 RALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPN 243

Query: 162 RVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS--VCNA 219
             L LF  M   G+ P+       L  +A  G   +   +H+ V KN   V  +  V  A
Sbjct: 244 EALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYV-KNSRRVQLNARVGTA 302

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           LI MY K   + DA +VF+ + D+D + WN+M+ GY  +    +A E F+ +   G   T
Sbjct: 303 LIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPT 362

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIF 338
             TF+ ++  C+ +  +    Q    + +           G MV    + G +E+A  + 
Sbjct: 363 DITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLV 422

Query: 339 SMMREMKDVVSWTAMIS 355
             M    D V W ++++
Sbjct: 423 QSMTIAPDTVMWVSLLA 439



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/317 (22%), Positives = 135/317 (42%), Gaps = 45/317 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P ++F+ +N ++  Y +     EAL LF  + R G+      +   L     L
Sbjct: 215 RELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQL 274

Query: 92  FDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                GR +H     S   + +  V T+L+D+Y +  ++ED   VF+ + + ++V W ++
Sbjct: 275 GTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAM 334

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++GYA +  + + LE+F +++ +G+ P   TF  +L   +  G+V    Q          
Sbjct: 335 INGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQ---------- 384

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT-----WNSMVAGYVTNELHMEAF 265
                                     F  ME+  +I      +  MV       L  EAF
Sbjct: 385 -------------------------FFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAF 419

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
               +M +A   +    +VS++  C   K + L +Q+   ++  G+  +  +   L   Y
Sbjct: 420 HLVQSMTIAPDTV---MWVSLLAACRLHKNMALGQQIADYLVAGGL-ANSGMYILLSNIY 475

Query: 326 SKCGKMEDASKIFSMMR 342
           +  G  E+ +++ SMM+
Sbjct: 476 AAVGNWEEVARVRSMMK 492


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/646 (34%), Positives = 365/646 (56%), Gaps = 28/646 (4%)

Query: 218  NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
            N LI MY K +    A  VFD M +R+ ++W+++++G+V N     +   F+ MG  G  
Sbjct: 416  NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 475

Query: 278  LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                TF + +K C     L    Q+H   LK G +    +   L+  YSKCG++ +A K+
Sbjct: 476  PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 535

Query: 338  FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV--RPNGFTYSIILTAQPAV 395
            F  + + + ++SW AMI+G +  G    A++ F  M    +  RP+ FT + +L A  + 
Sbjct: 536  FRRIVD-RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 594

Query: 396  SPF----QVHAHIIKTNYE--KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
                   Q+H  ++++ +    S ++  +L++ YVK G L  A K F+ I EK +++WS+
Sbjct: 595  GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSS 654

Query: 450  MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
            ++ GYAQ G+   A+ ++++L     + + F  SS+I    A  A + QGKQ  A ++K 
Sbjct: 655  LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV-FADFALLRQGKQMQALAVKL 713

Query: 510  KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
                   V +++V MY K G ++ A + F   + +D++SW  +I GY +HG  KK++ +F
Sbjct: 714  PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 773

Query: 570  KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             EM R ++E D + ++ V++AC+H+G++ EG++ F  ++  H I P +EHY+C+VDL  R
Sbjct: 774  YEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR 833

Query: 630  AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
            AG L++A  +I+ MP   +  +W+T+L+ CR              L+ +   + A YV++
Sbjct: 834  AGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMM 893

Query: 676  SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
            SN+Y   G+W E+   R+L N + +KKEAG SW+E++ + + F +G+ SHP +  I   L
Sbjct: 894  SNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETL 953

Query: 736  EELSTRLKDA-GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA---TPAGAPLQI 791
            +E   RL++  GY     + L DIDDE KE  L  HSE+LAI   L        G  +++
Sbjct: 954  KEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRV 1013

Query: 792  VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
             KNLRVC DCH  IK +SK+ +   VVRD  RFH F++G CSCGDY
Sbjct: 1014 FKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 242/475 (50%), Gaps = 20/475 (4%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
           S  L+D+Y +        +VFD M E NVVSW++L+SG+  N      L LF  M  +GI
Sbjct: 415 SNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI 474

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
            PN FTFST L        +   +Q+H   +K G E++  V N+L+ MY K   + +A  
Sbjct: 475 YPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEK 534

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF--VSVIKLCATT 293
           VF  + DR  I+WN+M+AG+V      +A +TF  M  A  +     F   S++K C++T
Sbjct: 535 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 594

Query: 294 KELRLARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
             +   +Q+H  ++++G     +  I   L+  Y KCG +  A K F  ++E K ++SW+
Sbjct: 595 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWS 653

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKT 407
           ++I G+ Q G    A+  F ++     + + F  S I+      +      Q+ A  +K 
Sbjct: 654 SLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL 713

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
                 SV  ++++ Y+K G++DEA K F  +  KD+++W+ ++ GY + G  + +V+I+
Sbjct: 714 PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 773

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALV 522
            ++    ++P+E  + +V++AC+  S  +++G++  +       IK ++ +  CV    V
Sbjct: 774 YEMLRHNIEPDEVCYLAVLSACSH-SGMIKEGEELFSKLLETHGIKPRVEHYACV----V 828

Query: 523 TMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
            +  + G ++ A  +      K ++  W +++     HG  +   EV K + R D
Sbjct: 829 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 883



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 197/373 (52%), Gaps = 8/373 (2%)

Query: 23  RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS 82
           R P  + K   +FD  P+RN V ++ L+  +  +   + +L+LF  + R G+     T S
Sbjct: 426 REPLMAYK---VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFS 482

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           + LK CG L     G Q+H  C+K GF   V V  SLVD+Y +   + +  +VF  + + 
Sbjct: 483 TNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR 542

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK--PNSFTFSTVLGVLADEGIVATAVQ 200
           +++SW ++++G+       + L+ F  MQ   IK  P+ FT +++L   +  G++    Q
Sbjct: 543 SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQ 602

Query: 201 VHTMVIKNGGEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +H  ++++G    +S  +  +L+ +Y+K   +  AR  FD ++++  I+W+S++ GY   
Sbjct: 603 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQE 662

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
              +EA   F  +    +++      S+I + A    LR  +Q+ +  +K     + ++ 
Sbjct: 663 GEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL 722

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             ++  Y KCG +++A K F+ M ++KDV+SWT +I+G+ ++G    +V  F +M R  +
Sbjct: 723 NSVVDMYLKCGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 781

Query: 379 RPNGFTYSIILTA 391
            P+   Y  +L+A
Sbjct: 782 EPDEVCYLAVLSA 794



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 169/340 (49%), Gaps = 5/340 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLKTCG 89
           + +F R   R+ + +N ++  +       +AL+ F  ++   +       TL+S+LK C 
Sbjct: 533 EKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS 592

Query: 90  CLFDHVFGRQVHCECVKSGF--ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
                  G+Q+H   V+SGF       ++ SLVDLY++   +   R+ FD + E  ++SW
Sbjct: 593 STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISW 652

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           +SL+ GYA+       + LF R+Q    + +SF  S+++GV AD  ++    Q+  + +K
Sbjct: 653 SSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK 712

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
               + TSV N+++ MYLK  +V +A   F  M+ +D I+W  ++ GY  + L  ++   
Sbjct: 713 LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRI 772

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYS 326
           F  M     E     +++V+  C+ +  ++   +L S++L+ +GI         ++    
Sbjct: 773 FYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 832

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           + G++++A  +   M    +V  W  ++S    +G I+L 
Sbjct: 833 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELG 872



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 18/152 (11%)

Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
           L  S+ L+ MY K      A +VF    +R++VSW++++ G+  +G  K +L +F EM R
Sbjct: 412 LITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR 471

Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQY--------FDIMVNEHHIYPTMEHYSCMVDL 626
           Q +  +  TF   + AC     +++G Q         F++MV         E  + +VD+
Sbjct: 472 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV---------EVGNSLVDM 522

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           YS+ G + +A  +  R+    S   W  ++A 
Sbjct: 523 YSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 553


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 246/726 (33%), Positives = 399/726 (54%), Gaps = 27/726 (3%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           +N ++  + R  L  +AL  +  +   G+    ST   ++K C  L  +  G +   + V
Sbjct: 102 WNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL-KNFKGIEFLSDTV 160

Query: 106 KSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
            S    D N  V++SL+  Y+    ++   ++FD + + + V W  +L+GYA+   +D V
Sbjct: 161 SS-LGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSV 219

Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
           ++ F  M+++ I PN+ TF  VL V A + ++   VQ+H +V+ +G +   S+ N+L+SM
Sbjct: 220 IKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSM 279

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K     DA  +F  M   D++TWN M++GYV + L  E+   F  M  +G      TF
Sbjct: 280 YSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITF 339

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
            S++   +  + L   RQ+H  ++++ I  D  + + L+ AY KC  +  A KIFS    
Sbjct: 340 SSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNS 399

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
           + DVV +TAMISG+L NG    A+  F  + +  + PN  T   IL     +       +
Sbjct: 400 V-DVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRE 458

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           +H  IIK  ++   ++G A+++ Y K G ++ A ++F  + ++DIV+W++M+   AQ  +
Sbjct: 459 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDN 518

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACT-APSAAVEQGKQFHACSIKAKLNNALCVS 518
              A+ I+RQ+   G+  +  + S+ ++AC   PS +   GK  H   IK  L   +   
Sbjct: 519 PSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESF--GKAIHGFMIKHSLALDVYSE 576

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM-RRQDL 577
           S L+ MY+K GN+++A  VF   +++++VSWNS+I  Y  HG  K +L +F EM  +   
Sbjct: 577 STLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGN 636

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
             D ITF+ +I+ C H G VDEG ++F  M  ++ I P  EHY+C+VDL+ RAG L +A 
Sbjct: 637 RPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAY 696

Query: 638 DIINRMPFAASATVWRTVL--------------AACRLISLQPHDSAIYVLLSNMYAATG 683
           + +  MPF   A VW T+L              A+ RL+ L P +S  YVL+SN +A TG
Sbjct: 697 ETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTG 756

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W+   +VR LM +R+V+K  GYSWIE+   T+ F++GD++HP+S+ IYS L  L   L+
Sbjct: 757 EWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNHPESSHIYSLLNSLLEELR 816

Query: 744 DAGYKP 749
             GY P
Sbjct: 817 LEGYIP 822



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/552 (25%), Positives = 269/552 (48%), Gaps = 19/552 (3%)

Query: 27  YSKKDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
           Y K D +  LFDR  Q++ V +N +L  Y +       +  F  +R   +     T   V
Sbjct: 182 YGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCV 241

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L  C        G Q+H   V SG   + ++  SL+ +Y +    +D  ++F  M+ ++ 
Sbjct: 242 LSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADT 301

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           V+W  ++SGY ++ + +  L  F+ M   G+ P++ TFS++L  ++    +    Q+H  
Sbjct: 302 VTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCY 361

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           ++++   +   + +ALI  Y K + V  A+ +F      D + + +M++GY+ N L+++A
Sbjct: 362 IMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDA 421

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
            E F  +          T VS++ +      L+L R+LH  ++K G D   NI   ++  
Sbjct: 422 LEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 481

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y+KCG+M  A +IF  + + +D+VSW +MI+   Q+     A++ F QM   G+  +  +
Sbjct: 482 YAKCGRMNLAYEIFGRLSK-RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVS 540

Query: 385 YSIILTA---QPAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
            S  L+A    P+ S  + +H  +IK +        + L++ Y K G L  A  VF+ + 
Sbjct: 541 ISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMK 600

Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQG 499
           EK+IV+W++++A Y   G  + ++ ++ ++  + G +P++ TF  +I+ C      V++G
Sbjct: 601 EKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCH-VGDVDEG 659

Query: 500 KQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
            +F         I+ +  +  CV    V ++ + G +  A E  K      D   W +++
Sbjct: 660 VRFFRSMTQDYGIQPQQEHYACV----VDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLL 715

Query: 554 CGYAQHGHTKKA 565
                H + + A
Sbjct: 716 GASRLHKNVELA 727



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 181/358 (50%), Gaps = 7/358 (1%)

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM-REMKDVV 348
           C+    LR  +Q+H+ V+ N I  D      ++  Y+ CG   +  K+F  +   +  + 
Sbjct: 41  CSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIR 100

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHI 404
            W ++IS  ++ G ++ A+ F+ +M   GV P+  T+  ++ A  A+  F+    +   +
Sbjct: 101 PWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTV 160

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
                + +  V ++L+ AY++ G +D A K+F+ + +KD V W+ ML GYA+ G ++  +
Sbjct: 161 SSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVI 220

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           K +  +  + + PN  TF  V++ C A    ++ G Q H   + + L+    + ++L++M
Sbjct: 221 KGFSLMRMDQISPNAVTFDCVLSVC-ASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSM 279

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           YSK G  + A ++F+   + D V+WN MI GY Q G  +++L  F EM    +  D ITF
Sbjct: 280 YSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITF 339

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
             ++ + +    ++  +Q     +  H I   +   S ++D Y +   +  A  I ++
Sbjct: 340 SSLLPSVSKFENLEYCRQ-IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQ 396


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 226/690 (32%), Positives = 377/690 (54%), Gaps = 28/690 (4%)

Query: 175 IKPNSFT-------FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
           ++PN F          T+L +      +A+  Q++  ++ N           +   Y++ 
Sbjct: 1   MEPNPFPPISSRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQL 60

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
             +  A   F+ +   +  +WN+++A +  N+   +  + F  M   G  +     V  +
Sbjct: 61  GSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAV 120

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
           K C      + A+  HS  +K  ++ D  +   LM  Y++ G +E+A K+F  +  +K+ 
Sbjct: 121 KACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEV-PLKNS 179

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAH 403
           V W  MI GHL           F +M R G   + F    ++ A   V   +     H  
Sbjct: 180 VIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGL 239

Query: 404 IIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
            IK N+ + +F + T+L++ Y+K G LD A K+FE I  +D+V WSA++AG+A+ G    
Sbjct: 240 CIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALE 299

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           ++ ++RQ+ ++ V PN  TF+S++ AC++   +++QG+  H   I+  +   +   ++ +
Sbjct: 300 SISMFRQMLADSVTPNSVTFASIVLACSS-LGSLKQGRSVHGYMIRNGVELDVKNYTSFI 358

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY+K G I +A  VF +  ++++ SW++MI G+  HG   +AL +F EMR  +   + +
Sbjct: 359 DMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSV 418

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
           TF+ V++AC+H+G ++EG  +F  M  ++ I P  EHY+CMVDL  RAG +++A+  IN 
Sbjct: 419 TFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINN 478

Query: 643 MPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQER 688
           MP    A+ W  +L ACR              L+ L+   S +YV+LSN+YA  G W+  
Sbjct: 479 MPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMV 538

Query: 689 ARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
            + R  M ++ + K  G++ IE++ K Y F + D    ++ QI S    L  R+++ GY 
Sbjct: 539 KKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYV 598

Query: 749 PDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLI 808
           PD  +VL D+DDE K+ +L  HSE+LAI FGL+ +  G P++I KN+RVCGDCHT  K I
Sbjct: 599 PDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFI 658

Query: 809 SKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           S + RR I++RD  RFHH ++G+CSCGDYW
Sbjct: 659 SLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 228/480 (47%), Gaps = 7/480 (1%)

Query: 99  QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           Q++ + + +   R +     +   Y++  ++    + F+ +   N+ SW ++L+ +++NK
Sbjct: 33  QLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNK 92

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
               VL+LF RM  EG   +SF     +       +   A   H++ IK   E    V  
Sbjct: 93  CFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAP 152

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL+++Y +   + +A  VF+ +  ++S+ W  M+ G++        FE F+ M  +G EL
Sbjct: 153 ALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFEL 212

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVL-KNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
                  +I+ C      +  +  H   + KN ID +  ++T L+  Y KCG ++ A K+
Sbjct: 213 DPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKL 272

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
           F  +   +DVV W+A+I+G  +NG    +++ F QM  + V PN  T++ I+ A  ++  
Sbjct: 273 FEEI-SYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGS 331

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
            +    VH ++I+   E      T+ ++ Y K G +  A +VF  I EK++ +WS M+ G
Sbjct: 332 LKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMING 391

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           +   G    A+ ++ ++ S    PN  TF SV++AC+      E    F + S    +  
Sbjct: 392 FGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITP 451

Query: 514 ALCVSSALVTMYSKKGNIESA-SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
                + +V +  + G I+ A S +     +    +W +++     H   + A EV K++
Sbjct: 452 VEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKL 511



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 197/445 (44%), Gaps = 24/445 (5%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F+     N   +N +L  + ++    + L LF  + + G  +    L   +K C  L   
Sbjct: 70  FNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLF 129

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
              +  H   +K     D  V+ +L+++Y    ++E+  +VF+++   N V W  ++ G+
Sbjct: 130 QGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGH 189

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI-KNGGEVV 213
                   V ELF RM+  G + + F    ++    +          H + I KN  +  
Sbjct: 190 LNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSN 249

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +  +L+ MY+K   +  A  +F+ +  RD + W++++AG+  N   +E+   F  M  
Sbjct: 250 FFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLA 309

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
                   TF S++  C++   L+  R +H  +++NG++ D    T  +  Y+KCG +  
Sbjct: 310 DSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVT 369

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A ++F  + E K+V SW+ MI+G   +G    A+N F +M      PN  T+  +L+A  
Sbjct: 370 AYRVFCQIPE-KNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACS 428

Query: 392 -QPAVSPFQVHAHIIKTNY-----EKSFSVGTALLNAYVKKGILDEAAK-VFELIDEKDI 444
               +     H   +  +Y     E+ ++    LL    + G +DEA   +  +  E   
Sbjct: 429 HSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLG---RAGKIDEALSFINNMPTEPGA 485

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQ 469
            AW A+L          GA +I+R+
Sbjct: 486 SAWGALL----------GACRIHRR 500



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/329 (24%), Positives = 155/329 (47%), Gaps = 4/329 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           ++   +F+  P +N V +  ++  +   S       LF  +RR G  L    +  +++ C
Sbjct: 165 EEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQAC 224

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
           G ++    G+  H  C+K  F  D N  + TSLVD+YM+   ++   ++F++++  +VV 
Sbjct: 225 GNVYAGKEGKTFHGLCIKKNFI-DSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVV 283

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W+++++G+ARN      + +F +M  + + PNS TF++++   +  G +     VH  +I
Sbjct: 284 WSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMI 343

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
           +NG E+      + I MY K   +  A  VF  + +++  +W++M+ G+  + L  EA  
Sbjct: 344 RNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALN 403

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLA-RQLHSQVLKNGIDFDHNIRTGLMVAY 325
            F  M          TFVSV+  C+ +  +        S     GI         ++   
Sbjct: 404 LFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLL 463

Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMI 354
            + GK+++A    + M       +W A++
Sbjct: 464 GRAGKIDEALSFINNMPTEPGASAWGALL 492


>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
          Length = 656

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/639 (36%), Positives = 346/639 (54%), Gaps = 54/639 (8%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N LI++Y+K   +  AR VFD M  R+ ++ N +++GY ++  H +A        +A   
Sbjct: 54  NNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALALLR---VADFG 110

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
           L      S +   A  +   + RQ H   +K G+     + + ++  Y +C  M++A K 
Sbjct: 111 LNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVKY 170

Query: 338 F----SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
                   R M   V     + GH             C  T+E          ++L +Q 
Sbjct: 171 SKKHGEKCRAMGSCV--ICRVLGH-------------CASTKE----------VVLGSQ- 204

Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                 VH   +K   E +  VG+AL++ Y K     EA +VFE++ EK+IV+W+A++  
Sbjct: 205 ------VHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTA 258

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
           Y Q    E A++++  +  EGV+PNEFT++  +N+C A  A ++ G    AC++K     
Sbjct: 259 YTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSC-AGLATLKNGNALGACTMKTGHWG 317

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
            L V +AL+ MYSK G++E A  VF     RD+VSWNS+I GYA HG  ++A+E F +M 
Sbjct: 318 LLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDML 377

Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
             +     +TFIGV++AC   GLVDEG  Y +IM+ E  + P  EHY+CMV L  R G L
Sbjct: 378 FAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRL 437

Query: 634 EKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMY 679
           ++A   I           WR++L++C+              +  L+P D   YVLLSNMY
Sbjct: 438 DEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMY 497

Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
           A    W    +VR+LM +  V+KE G SWI+V ++ + F + D  HP   QI  KL+EL 
Sbjct: 498 AKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHVFTSEDKKHPYMEQITKKLQELI 557

Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
            ++K  GY P+ +  L D++DE KE  L  HSE+LA+AFGL+ TP G  ++I+KN+R+C 
Sbjct: 558 DKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALAFGLIRTPKGEAIRIMKNVRICD 617

Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           DCH  IKLIS    R IVVRDT RFH  ++G+CSC DYW
Sbjct: 618 DCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSCDDYW 656



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 227/497 (45%), Gaps = 58/497 (11%)

Query: 96  FGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            G+ VH   V++  AR DV    +L+ LY++   +   R+VFD M   N VS   L+SGY
Sbjct: 34  LGKAVHARVVRA--ARFDVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGY 91

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A +  +   L L   ++V     N +  S+ +   A         Q H   IK G     
Sbjct: 92  ASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM-EAFETFNNMGL 273
            VC+A++ MY +                                  HM EA +     G 
Sbjct: 149 YVCSAVLHMYCQCA--------------------------------HMDEAVKYSKKHGE 176

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
               +       V+  CA+TKE+ L  Q+H+Q LK  ++ +  + + L+  Y KC    +
Sbjct: 177 KCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHE 236

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
           A+++F ++ E K++VSWTA+++ + QN   + A+  F  M  EGVRPN FTY++ L +  
Sbjct: 237 ANRVFEVLPE-KNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCA 295

Query: 394 AVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
            ++  +    + A  +KT +     V  AL+N Y K G +++A +VF  +  +D+V+W++
Sbjct: 296 GLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNS 355

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HA 504
           ++ GYA  G    A++ +  +      P+  TF  V++AC A    V++G  +       
Sbjct: 356 IIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSAC-AQLGLVDEGFYYLNIMMKE 414

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICG---YAQHG 560
             +K    +  C    +V +  + G ++ A    +      D+V+W S++     Y  +G
Sbjct: 415 VGVKPGKEHYTC----MVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYG 470

Query: 561 HTKKALEVFKEMRRQDL 577
              +  E   +++ +D+
Sbjct: 471 LGHRVAEQIFQLKPKDV 487



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 149/280 (53%), Gaps = 7/280 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
            +  VL  C    + V G QVH + +K     +V V ++LVD+Y + +   +  RVF+ +
Sbjct: 185 VICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVL 244

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            E N+VSWT++++ Y +N++ +  L+LF  M++EG++PN FT++  L   A    +    
Sbjct: 245 PEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGN 304

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +    +K G   +  VCNAL++MY KS  V DAR VF  M  RD ++WNS++ GY  + 
Sbjct: 305 ALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHG 364

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ----LHSQVLKNGIDFDH 315
              EA E F++M  A    +  TF+ V+  CA   +L L  +    L+  + + G+    
Sbjct: 365 RAREAMEAFHDMLFAEEVPSYVTFIGVLSACA---QLGLVDEGFYYLNIMMKEVGVKPGK 421

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
              T ++    + G++++A +         DVV+W +++S
Sbjct: 422 EHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLS 461



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 184/441 (41%), Gaps = 69/441 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P RN V  N L+  Y     H++AL L L +   GL  +   LSS +     +
Sbjct: 70  RQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL-LRVADFGLNEY--VLSSAVAATAHV 126

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
             +  GRQ H   +K+G A    V ++++ +Y +  ++++  +                 
Sbjct: 127 RSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMDEAVK----------------- 169

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
             Y++ K  ++   +            S     VLG  A    V    QVHT  +K   E
Sbjct: 170 --YSK-KHGEKCRAM-----------GSCVICRVLGHCASTKEVVLGSQVHTQALKRRLE 215

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V +AL+ MY K     +A  VF+ + +++ ++W +++  Y  NEL  +A + F +M
Sbjct: 216 LNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDM 275

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
            + G      T+   +  CA    L+    L +  +K G      +   LM  YSK G +
Sbjct: 276 EMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSV 335

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM------------------ 373
           EDA ++F  M   +DVVSW ++I G+  +G    A+  F  M                  
Sbjct: 336 EDARRVFLSM-PCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSA 394

Query: 374 -TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
             + G+   GF Y  I+  +  V P + H               T ++    + G LDEA
Sbjct: 395 CAQLGLVDEGFYYLNIMMKEVGVKPGKEHY--------------TCMVGLLCRVGRLDEA 440

Query: 433 AKVFEL-IDEKDIVAWSAMLA 452
            +  E      D+VAW ++L+
Sbjct: 441 ERFIESNCIGTDVVAWRSLLS 461



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/362 (20%), Positives = 157/362 (43%), Gaps = 35/362 (9%)

Query: 295 ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
           EL L + +H++V++    FD      L+  Y KCG++  A ++F  M   ++ VS   ++
Sbjct: 31  ELSLGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPS-RNPVSGNLLM 88

Query: 355 SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFS 414
           SG+  +G    A+                  +++  A   ++ + + + +  T + +S+ 
Sbjct: 89  SGYASSGRHRDAL------------------ALLRVADFGLNEYVLSSAVAATAHVRSYD 130

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           +G       +K G+ +                 SA+L  Y Q    + AVK  ++   + 
Sbjct: 131 MGRQCHGYAIKAGLAEHP------------YVCSAVLHMYCQCAHMDEAVKYSKKHGEKC 178

Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESA 534
                     V+  C A +  V  G Q H  ++K +L   + V SALV MY K      A
Sbjct: 179 RAMGSCVICRVLGHC-ASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEA 237

Query: 535 SEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHA 594
           + VF+   ++++VSW +++  Y Q+   + AL++F +M  + +  +  T+   + +C   
Sbjct: 238 NRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGL 297

Query: 595 GLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRT 654
             +  G       +   H +  +   + ++++YS++G +E A  +   MP       W +
Sbjct: 298 ATLKNGNALGACTMKTGH-WGLLPVCNALMNMYSKSGSVEDARRVFLSMP-CRDVVSWNS 355

Query: 655 VL 656
           ++
Sbjct: 356 II 357


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/663 (35%), Positives = 369/663 (55%), Gaps = 28/663 (4%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRT--NNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           H   +KSG A     +  L+  Y R+  + +   RRVFD++   + VSW +LL+  A + 
Sbjct: 14  HASLLKSGVAAPTPWN-QLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASG 72

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
            +     L   M  +G+  N+F   + L   A     A   Q+ ++ +K+G        +
Sbjct: 73  AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL+ +Y K   VRDAR VFDGM +R++++WN+++AGY  +     A E F  M   G   
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAP 192

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
             +TF S++          L  QLH +++K G      +    + AYS+CG ++D+ +IF
Sbjct: 193 DEATFASLLT-AVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF 251

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTA--QPAV 395
             + +++D++SW AM+  +  NG  D A+ FF +M +E GV P+ ++++ I+++  +   
Sbjct: 252 DGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGH 311

Query: 396 SPFQ---VHAHIIKTNYEKSFSVGTALLNAYVKKG---ILDEAAKVFELIDEKDIVAWSA 449
              Q   +H  +IK+  E    V  AL+  Y +     ++++A K F  +  KD V+W++
Sbjct: 312 DDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNS 371

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ML GY+Q G +  A+K +R + SE V+ +E+ FS+ + + ++  A ++ GKQ H   I +
Sbjct: 372 MLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRS-SSELAVLQLGKQIHGLVIHS 430

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              +   VSS+L+ MYSK G I+ A + F+   K   V WN+MI GYAQHG  +    +F
Sbjct: 431 GFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILF 490

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            EM ++    D ITF+G+IT+C+HAGLVDEG +  + M  ++ +   MEHY+C VDLY R
Sbjct: 491 NEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGR 550

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L+KA  +I+ MPF   A VW T+L ACR              L   +P   + YVLL
Sbjct: 551 AGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLL 610

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           S+MY+  G W +RA V+++M  R + K  G+SWIEVKN+ +SF A D SHP+ ++IY  L
Sbjct: 611 SSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEML 670

Query: 736 EEL 738
             L
Sbjct: 671 RVL 673



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/571 (28%), Positives = 282/571 (49%), Gaps = 21/571 (3%)

Query: 10  LINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI 69
           L+   ++  P  L +       + +FD  P+R+ V +N LL        H EA  L   +
Sbjct: 31  LLTAYSRSSPDGLAAA------RRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAM 84

Query: 70  RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
              GL      L S L++         G Q+    +KSG A +V  +++L+D+Y +   V
Sbjct: 85  HAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRV 144

Query: 130 EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL 189
            D R+VFD M E N VSW +L++GY  +      LELF  M+ EG+ P+  TF+++L   
Sbjct: 145 RDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLL--T 202

Query: 190 ADEGIVATAV-QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSIT 247
           A EG     + Q+H  ++K G  +  +V NA I+ Y +   ++D+R +FDG+ D RD I+
Sbjct: 203 AVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262

Query: 248 WNSMVAGYVTNELHMEAFETF-NNMGLAGAELTRSTFVSVIKLCAT-TKELRLARQLHSQ 305
           WN+M+  Y  N +  EA + F   M  +G      +F S+I  C+    +    R +H  
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGK---MEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           V+K+ ++    +   L+  Y++  +   MEDA K F+ +  +KD VSW +M++G+ Q+G 
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLV-LKDTVSWNSMLTGYSQHGL 381

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
              A+ FF  M  E VR + + +S  L +   ++      Q+H  +I + +  +  V ++
Sbjct: 382 SADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSS 441

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           L+  Y K GI+D+A K FE  D+   V W+AM+ GYAQ G  E    ++ ++       +
Sbjct: 442 LIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLD 501

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
             TF  +I +C+      E  +  +    K  +   +   +  V +Y + G ++ A ++ 
Sbjct: 502 HITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLI 561

Query: 539 KRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
                + D + W +++     HG+ + A +V
Sbjct: 562 DSMPFEPDAMVWMTLLGACRIHGNVELASDV 592



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 223/455 (49%), Gaps = 22/455 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           + +FD  P+RN V +N L+  Y        AL LFL + R GL    +T +S+L      
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGP 207

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSW 147
            C   H    Q+H + VK G A  + V  + +  Y +  +++D RR+FD + +  +++SW
Sbjct: 208 SCFLMH----QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISW 263

Query: 148 TSLLSGYARNKMNDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMV 205
            ++L  Y  N M+D  ++ F R MQ  G+ P+ ++F++++   ++ G      +V H +V
Sbjct: 264 NAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLV 323

Query: 206 IKNGGEVVTSVCNALISMYLKSK---MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           IK+  E VT VCNALI+MY +     M+ DA   F+ +  +D+++WNSM+ GY  + L  
Sbjct: 324 IKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSA 383

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +A + F  M           F + ++  +    L+L +Q+H  V+ +G   +  + + L+
Sbjct: 384 DALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLI 443

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YSK G ++DA K F    +    V W AMI G+ Q+G  +     F +M +     + 
Sbjct: 444 FMYSKSGIIDDARKSFEEA-DKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDH 502

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL------LNAYVKKGILDEAAKVF 436
            T+  ++T+          + I+ T  E  + V   +      ++ Y + G LD+A K+ 
Sbjct: 503 ITFVGLITSCSHAGLVDEGSEILNT-METKYGVPLRMEHYACGVDLYGRAGQLDKAKKLI 561

Query: 437 ELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           + +  E D + W  +L      G+ E A  +   L
Sbjct: 562 DSMPFEPDAMVWMTLLGACRIHGNVELASDVASHL 596


>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
 gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
          Length = 605

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/534 (38%), Positives = 329/534 (61%), Gaps = 22/534 (4%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  +  CG ++ A ++FS M  ++DV SW  M+SG  +NGAI+ A   F  M       
Sbjct: 78  LLSCHFACGDIDGAWRVFSTM-PVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPAR---- 132

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV-GTALLNAYVKKGILDEAAKVFELI 439
           N  +++ ++ A+ +        ++ +   EK+ ++  TA+++ Y+  G + +A + F  +
Sbjct: 133 NAVSWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAM 192

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQ 498
             +++V+W+A++AGY +      A+++++ +  +  V+PN  T SSV+  C+  SA +  
Sbjct: 193 PVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSA-LGF 251

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G+Q H   +K  L  ++ V ++L++MY K G+++ A ++F     +D+V+WN+MI GYAQ
Sbjct: 252 GRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQ 311

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG  +KA+++F++M+ + +  D IT + V+TAC H GL D G Q F+ M   ++I P ++
Sbjct: 312 HGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVD 371

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISL 664
           HYSCMVDL  RAG+LE+A+++I+ MPF    + + T+L ACR              LI  
Sbjct: 372 HYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQ 431

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P ++  YV L+N+YA    W + +RVR+ M D  V K  GYSW+E+K   + F + D  
Sbjct: 432 DPQNAGAYVQLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRL 491

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           HPQ + I+ KL+ L   +K  GY PD  + L D+++  K  +L +HSE+LAIAFGL++T 
Sbjct: 492 HPQLDLIHDKLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTS 551

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G  L+I KNLR+CGDCH   KLISK+E R+I++RDT RFHHF+ G CSCGDYW
Sbjct: 552 PGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 186/387 (48%), Gaps = 53/387 (13%)

Query: 110 ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHR 169
           AR +   T+ V   +R  ++      F         ++  LL+GYA+     R+ +   R
Sbjct: 4   ARPLTTGTAAVAAAVRRRDLAGAEEAFASTQLKTTTTYNCLLAGYAKASGPGRLADA-RR 62

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNGGEVVTSVCNALISMYLKSK 228
           +      P++ +++T+L      G +  A +V  TM +++    VTS  N ++S   K+ 
Sbjct: 63  LFDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRD----VTSW-NTMVSGLSKNG 117

Query: 229 MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIK 288
            + +A A+F  M  R++++WN+MVA   ++           +MG A              
Sbjct: 118 AIEEAEAMFRAMPARNAVSWNAMVAARASS----------GDMGAA-------------- 153

Query: 289 LCATTKELRLARQLHSQVLKNGID-FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
                            + +N  +  D  + T ++  Y   G ++ A + F  M  ++++
Sbjct: 154 ---------------ENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAM-PVRNL 197

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF----QVHA 402
           VSW A+++G+++N     A+  F  M  +  V+PN  T S +L     +S      QVH 
Sbjct: 198 VSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQ 257

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
             +K    +S +VGT+LL+ Y K G LD+A K+F+ +  KDIVAW+AM++GYAQ G    
Sbjct: 258 WCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRK 317

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINAC 489
           A+K++ ++  EGV P+  T  +V+ AC
Sbjct: 318 AIKLFEKMKDEGVVPDWITLLAVLTAC 344



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 7/176 (3%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL----PLFGSTLSSV 84
           +K    F   P RN V +N ++  Y ++S   +AL +F  +    +    P   STLSSV
Sbjct: 183 QKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNP---STLSSV 239

Query: 85  LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
           L  C  L    FGRQVH  C+K    R + V TSL+ +Y +  +++D  ++FD+M+  ++
Sbjct: 240 LLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDI 299

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           V+W +++SGYA++    + ++LF +M+ EG+ P+  T   VL      G+    +Q
Sbjct: 300 VAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQ 355



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 1/183 (0%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D  + T++V  YM T NV+     F  M   N+VSW ++++GY +N      L +F  M 
Sbjct: 165 DAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVFKTMV 224

Query: 172 VEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
            + I +PN  T S+VL   ++   +    QVH   +K       +V  +L+SMY K   +
Sbjct: 225 EDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDL 284

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            DA  +FD M  +D + WN+M++GY  +    +A + F  M   G      T ++V+  C
Sbjct: 285 DDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAVLTAC 344

Query: 291 ATT 293
             T
Sbjct: 345 IHT 347



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/327 (21%), Positives = 130/327 (39%), Gaps = 80/327 (24%)

Query: 321 LMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
           L+  Y+K    G++ DA ++F  +    D VS+  ++S H   G ID A   F  M    
Sbjct: 44  LLAGYAKASGPGRLADARRLFDSIPH-PDAVSYNTLLSCHFACGDIDGAWRVFSTMPVRD 102

Query: 378 VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
           V                                   +    +++   K G ++EA  +F 
Sbjct: 103 V-----------------------------------TSWNTMVSGLSKNGAIEEAEAMFR 127

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            +  ++ V+W+AM+A  A  GD   A  ++R                      AP     
Sbjct: 128 AMPARNAVSWNAMVAARASSGDMGAAENLFRN---------------------APEK--- 163

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
                          +A+ + +A+V+ Y   GN++ A E F+    R+LVSWN+++ GY 
Sbjct: 164 --------------TDAI-LWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYV 208

Query: 558 QHGHTKKALEVFKEMRRQDL-EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
           ++     AL VFK M    + + +  T   V+  C++   +  G+Q     + +  +  +
Sbjct: 209 KNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCM-KLPLGRS 267

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +   + ++ +Y + G L+ A  + + M
Sbjct: 268 ITVGTSLLSMYCKCGDLDDACKLFDEM 294



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 9/197 (4%)

Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           +  + GTA + A V++  L  A + F     K    ++ +LAGYA+     G +   R+L
Sbjct: 5   RPLTTGTAAVAAAVRRRDLAGAEEAFASTQLKTTTTYNCLLAGYAK-ASGPGRLADARRL 63

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
                 P+  +++++++   A        + F    ++      +   + +V+  SK G 
Sbjct: 64  FDSIPHPDAVSYNTLLSCHFACGDIDGAWRVFSTMPVR-----DVTSWNTMVSGLSKNGA 118

Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           IE A  +F+    R+ VSWN+M+   A  G    A  +F   R    + D I +  +++ 
Sbjct: 119 IEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLF---RNAPEKTDAILWTAMVSG 175

Query: 591 CTHAGLVDEGQQYFDIM 607
               G V +  +YF  M
Sbjct: 176 YMDTGNVQKAMEYFRAM 192


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/656 (34%), Positives = 369/656 (56%), Gaps = 30/656 (4%)

Query: 208  NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            +G  ++TS  N LI MY K +    A  VFD M +R+ ++W ++++G+V N     +   
Sbjct: 400  SGLNLITS--NYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457

Query: 268  FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            F  MG  G      TF + +K C     L    Q+H   LK G +    +   L+  YSK
Sbjct: 458  FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517

Query: 328  CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV--RPNGFTY 385
            CG++ +A K+F  M   + ++SW AMI+G++  G    A+  F  M    +  RP+ FT 
Sbjct: 518  CGRINEAEKVFRWMVG-RSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTL 576

Query: 386  SIILTAQPAVSPF----QVHAHIIKTNYE--KSFSVGTALLNAYVKKGILDEAAKVFELI 439
            + +L A  +        Q+H  ++++ +    S ++  +L++ YVK G L  A K F+ I
Sbjct: 577  TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQI 636

Query: 440  DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             EK +++WS+++ GYAQ GD   A+ ++++L     + + F  SS+I    A  A ++QG
Sbjct: 637  KEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGV-FADFALLQQG 695

Query: 500  KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
            KQ  A  +K        VS++LV MY K G ++ A + F   + +D++SW  MI GY +H
Sbjct: 696  KQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKH 755

Query: 560  GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
            G  KKA+ +F +M R ++E D + ++ V++AC+H+G++ EG++ F  ++    I P +EH
Sbjct: 756  GLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEH 815

Query: 620  YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
            Y+C+VDL  RAG L++A  +++ MP   +  +W+T+L+ CR              L+ + 
Sbjct: 816  YACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 875

Query: 666  PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
              + A YV++SN+Y   G+W E+   R+L + + ++KEAG SW+E++ + + F +G+ SH
Sbjct: 876  GKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSH 935

Query: 726  PQSNQIYSKLEELSTRLKDA-GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVA-- 782
            P +  I   L+E+  RL++  GY     + L DIDDE KE  L  HSE+LAI   L    
Sbjct: 936  PLTLVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGG 995

Query: 783  -TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
                G  +++ KNLRVC DCH  IK +SK+ +   VVRD  RFH F++G CSCGDY
Sbjct: 996  LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 244/484 (50%), Gaps = 20/484 (4%)

Query: 107 SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLEL 166
           SG   ++  S  L+D+Y +        +VFD M E NVVSWT+L+SG+  N   +  L L
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457

Query: 167 FHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
           F  M  +GI PN FTFST L        +   +Q+H   +K G E++  V N+L+ MY K
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF--V 284
              + +A  VF  M  R  I+WN+M+AGYV       A  TF  M  A  +     F   
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHN--IRTGLMVAYSKCGKMEDASKIFSMMR 342
           S++K C++T  +   +Q+H  ++++G     +  I   L+  Y KCG +  A K F  ++
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
           E K ++SW+++I G+ Q G    A+  F ++     + + F  S I+      +      
Sbjct: 638 E-KTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGK 696

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           Q+ A ++K       SV  +L++ Y+K G++DEA K F  +  KD+++W+ M+ GY + G
Sbjct: 697 QMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHG 756

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA-----CSIKAKLNN 513
             + AV I+ ++    ++P+E  + +V++AC+  S  +++G++  +       IK ++ +
Sbjct: 757 LGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSH-SGMIKEGEELFSKLLETQGIKPRVEH 815

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             CV    V +  + G ++ A  +      K ++  W +++     HG  +   EV K +
Sbjct: 816 YACV----VDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 871

Query: 573 RRQD 576
            R D
Sbjct: 872 LRID 875



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 191/362 (52%), Gaps = 5/362 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  P+RN V +  L+  +  +     +L+LF  + R G+     T S+ LK CG L  
Sbjct: 426 VFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNA 485

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H  C+K GF   V V  SLVD+Y +   + +  +VF  M   +++SW ++++G
Sbjct: 486 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAG 545

Query: 154 YARNKMNDRVLELFHRMQVEGIK--PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           Y       R L  F  MQ   IK  P+ FT +++L   +  G++    Q+H  ++++G  
Sbjct: 546 YVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 605

Query: 212 VVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
             +S  +  +L+ +Y+K   +  AR  FD ++++  I+W+S++ GY      +EA   F 
Sbjct: 606 CPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFK 665

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            +    +++      S+I + A    L+  +Q+ + V+K     + ++   L+  Y KCG
Sbjct: 666 RLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCG 725

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
            +++A K F+ M ++KDV+SWT MI+G+ ++G    AV+ F +M R  + P+   Y  +L
Sbjct: 726 LVDEAEKCFAEM-QLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVL 784

Query: 390 TA 391
           +A
Sbjct: 785 SA 786



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 3/290 (1%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGF--ARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
           TL+S+LK C        G+Q+H   V+SGF       ++ SLVDLY++  N+   R+ FD
Sbjct: 575 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFD 634

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
            + E  ++SW+SL+ GYA+       + LF R+Q    + +SF  S+++GV AD  ++  
Sbjct: 635 QIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQ 694

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             Q+  +V+K    + TSV N+L+ MYLK  +V +A   F  M+ +D I+W  M+ GY  
Sbjct: 695 GKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGK 754

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHN 316
           + L  +A   FN M     E     +++V+  C+ +  ++   +L S++L+  GI     
Sbjct: 755 HGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVE 814

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               ++    + G++++A  +   M    +V  W  ++S    +G I+L 
Sbjct: 815 HYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELG 864


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/769 (31%), Positives = 407/769 (52%), Gaps = 24/769 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R    +N ++  Y  +     AL L+  +R  G+PL  S+  ++LK C  L
Sbjct: 99  EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
            D   G ++H   VK G+     +  +LV +Y + +++   RR+FD   E  + V W S+
Sbjct: 159 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 218

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           LS Y+ +  +   LELF  M + G  PNS+T  + L             ++H  V+K+  
Sbjct: 219 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 278

Query: 211 EVVT-SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 VCNALI+MY +   +  A  +   M + D +TWNS++ GYV N ++ EA E F+
Sbjct: 279 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 338

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
           +M  AG +    +  S+I        L    +LH+ V+K+G D +  +   L+  YSKC 
Sbjct: 339 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 398

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
                 + F  M + KD++SWT +I+G+ QN     A+  F  + ++ +  +      IL
Sbjct: 399 LTCYMGRAFLRMHD-KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 457

Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A   +       ++H HI++     +  +   L++ Y K   +  A +VFE I  KD+V
Sbjct: 458 RASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVV 516

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           +W++M++  A  G+   AV+++R++   G+  +       I +  A  +A+ +G++ H  
Sbjct: 517 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL-CILSAAASLSALNKGREIHCY 575

Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
            ++        ++ A+V MY+  G+++SA  VF R  ++ L+ + SMI  Y  HG  K A
Sbjct: 576 LLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAA 635

Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
           +E+F +MR +++  D I+F+ ++ AC+HAGL+DEG+ +  IM +E+ + P  EHY C+VD
Sbjct: 636 VELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVD 695

Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAI 671
           +  RA  + +A + +  M    +A VW  +LAAC              RL+ L+P +   
Sbjct: 696 MLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 755

Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
            VL+SN++A  G W +  +VR  M    ++K  G SWIE+  K + F A D SHP+S +I
Sbjct: 756 LVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEI 815

Query: 732 YSKLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
           Y KL E++ +L ++ GY  DT +VL ++D+  K  +L  HSER+AIA+G
Sbjct: 816 YEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 864



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 1/147 (0%)

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           NN+   + A V     K    S  +VF     R   +WN+MI  Y  +G    AL ++  
Sbjct: 76  NNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 135

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           MR + +     +F  ++ AC     +  G +   ++V   + + T    + +V +Y++  
Sbjct: 136 MRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGY-HSTGFIVNALVSMYAKND 194

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAA 658
            L  A  + +       A +W ++L++
Sbjct: 195 DLSAARRLFDGFQEKGDAVLWNSILSS 221


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/709 (33%), Positives = 387/709 (54%), Gaps = 25/709 (3%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ G+A   +    L  +  M  +G +P+ FTF  V+   A  G +      H MVIK G
Sbjct: 78  MIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLG 137

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E     CN+L++ Y K  +V DA  VFDGM  RD +TWN+MV GYV+N L   A   F 
Sbjct: 138 LEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQ 197

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELR--LARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            M  A  E+   +   +  L A   E+     +++H  V+++G++ D  + T L+  Y K
Sbjct: 198 EMHDA-LEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCK 256

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG++  A  +F+ M  ++ VV+W  MI G+  N   D A + F QM  EG++    T   
Sbjct: 257 CGEVAYARSVFATM-PLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAIN 315

Query: 388 ILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L A    + ++    VH ++++  +     + TALL  Y K G ++ + K+F  I  K 
Sbjct: 316 LLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKT 375

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           +V+W+ M+A Y        A+ ++ +L ++ + P+ FT S+V+ A      ++   +Q H
Sbjct: 376 LVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVL-LGSLRHCRQIH 434

Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
           +  I         + +A++ MY++ G++ ++ E+F +   +D++SWN+MI GYA HG  K
Sbjct: 435 SYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGK 494

Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
            ALE+F EM+   L+ +  TF+ V+TAC+ +GLVDEG  +F++M+ E+ + P +EHY CM
Sbjct: 495 TALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCM 554

Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQPHDS 669
            DL  R G L + +  I  MP   ++ VW ++L              AA R+  L+  ++
Sbjct: 555 TDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNT 614

Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
             Y++LS+MYA  G W++  RVR LM ++ +++    S +E+ +   SF  GD+SH QS 
Sbjct: 615 GCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSR 674

Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
            I+     LS ++++     + SY +          + ++HS RLA+ FGL+++  G+P+
Sbjct: 675 TIHEVSNILSRKIEETDDTRNQSYPVPVA--TRTTTMPNKHSVRLAVVFGLISSEIGSPI 732

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            + KN+R+C  CH  +KLIS+   R IVV D+  +H F +G C CGDYW
Sbjct: 733 LVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 212/425 (49%), Gaps = 7/425 (1%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K C  L     GR  H   +K G   DV    SLV  Y +   VED  RVFD M
Sbjct: 109 TFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGM 168

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATA 198
              ++V+W +++ GY  N +    L  F  M     ++ +S      L     E      
Sbjct: 169 PVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQG 228

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            ++H  VI++G E    V  +L+ MY K   V  AR+VF  M  R  +TWN M+ GY  N
Sbjct: 229 KEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALN 288

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           E   EAF+ F  M   G ++   T ++++  CA T+     R +H  V++        + 
Sbjct: 289 ERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLE 348

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y K GK+E + KIF  +   K +VSW  MI+ ++       A+  F ++  + +
Sbjct: 349 TALLEMYGKVGKVESSEKIFGKIAN-KTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPL 407

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            P+ FT S ++ A   +       Q+H++II   Y ++  +  A+L+ Y + G +  + +
Sbjct: 408 YPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASRE 467

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F+ +  KD+++W+ M+ GYA  G  + A++++ ++   G++PNE TF SV+ AC+  S 
Sbjct: 468 IFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSV-SG 526

Query: 495 AVEQG 499
            V++G
Sbjct: 527 LVDEG 531



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 13/375 (3%)

Query: 26  FYSK-----KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGS 79
           FY+K       + +FD  P R+ V +N ++  Y  + L   AL  F  +   L +     
Sbjct: 151 FYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSV 210

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
            + + L  C      + G+++H   ++ G  +D+ V TSL+D+Y +   V   R VF  M
Sbjct: 211 GIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATM 270

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
               VV+W  ++ GYA N+  D   + F +M+ EG++    T   +L   A         
Sbjct: 271 PLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGR 330

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            VH  V++        +  AL+ MY K   V  +  +F  + ++  ++WN+M+A Y+  E
Sbjct: 331 SVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKE 390

Query: 260 LHMEAFETF---NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           ++ EA   F    N  L     T ST V    L  +   LR  RQ+HS ++  G   +  
Sbjct: 391 MYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGS---LRHCRQIHSYIIGLGYAENTL 447

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           I   ++  Y++ G +  + +IF  M   KDV+SW  MI G+  +G    A+  F +M   
Sbjct: 448 IMNAVLHMYARSGDVVASREIFDKMVS-KDVISWNTMIMGYAIHGQGKTALEMFDEMKYN 506

Query: 377 GVRPNGFTYSIILTA 391
           G++PN  T+  +LTA
Sbjct: 507 GLQPNESTFVSVLTA 521



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 133/262 (50%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F   P R  V +N ++  Y  +    EA + F+ +R  GL +   T  ++L  C   
Sbjct: 264 RSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQT 323

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              ++GR VH   V+  F   V + T+L+++Y +   VE   ++F  +    +VSW +++
Sbjct: 324 ESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMI 383

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + Y   +M    + LF  +  + + P+ FT STV+      G +    Q+H+ +I  G  
Sbjct: 384 AAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYA 443

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
             T + NA++ MY +S  V  +R +FD M  +D I+WN+M+ GY  +     A E F+ M
Sbjct: 444 ENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEM 503

Query: 272 GLAGAELTRSTFVSVIKLCATT 293
              G +   STFVSV+  C+ +
Sbjct: 504 KYNGLQPNESTFVSVLTACSVS 525



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS--TLSSVLK 86
           +  + +F +   +  V +N ++  Y    ++ EA+ LFL +  L  PL+    T+S+V+ 
Sbjct: 362 ESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLEL--LNQPLYPDYFTMSTVVP 419

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               L      RQ+H   +  G+A +  +  +++ +Y R+ +V   R +FD M   +V+S
Sbjct: 420 AFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVIS 479

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           W +++ GYA +      LE+F  M+  G++PN  TF +VL   +  G+V
Sbjct: 480 WNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLV 528



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 8/142 (5%)

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           S +LV   + +G ++ A E     R  D    N MI G+A  G    AL  ++ M     
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLE 634
             D  TF  V+  C   G +DEG+    +++    EH +Y      + +V  Y++ G++E
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTC----NSLVAFYAKLGLVE 159

Query: 635 KAMDIINRMPFAASATVWRTVL 656
            A  + + MP     T W T++
Sbjct: 160 DAERVFDGMPVRDIVT-WNTMV 180


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/825 (28%), Positives = 432/825 (52%), Gaps = 39/825 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD    R    +  ++  + +      AL+LF  +   G      T SSV+++C  L
Sbjct: 78  RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            D  +G +VH   +K+GF  +  V +SL DLY +    ++   +F  +  ++ +SWT ++
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           S     +     L+ +  M   G+ PN FTF  +LG  +  G+      +H+ +I  G  
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIP 256

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   +  +L+  Y +   + DA  V +   ++D   W S+V+G+V N    EA  TF  M
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +    T+ +++ LC+  + L   +Q+HSQ +K G +   ++   L+  Y KC   
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSAS 376

Query: 332 E-DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           E +AS++F  M    +VVSWT +I G + +G +        +M +  V PN  T S +L 
Sbjct: 377 EVEASRVFGAMVS-PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR 435

Query: 391 AQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
           A   +       ++HA++++ + +    VG +L++AY     +D A  V   +  +D + 
Sbjct: 436 ACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           +++++  + ++G  E A+ +   +  +G++ ++ +    I+A +A   A+E GK  H  S
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA-SANLGALETGKHLHCYS 554

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           +K+  + A  V ++LV MYSK G++E A +VF+     D+VSWN ++ G A +G    AL
Sbjct: 555 VKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSAL 614

Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
             F+EMR ++ E D +TF+ +++AC++  L D G +YF +M   ++I P +EHY  +V +
Sbjct: 615 SAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGI 674

Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIY 672
             RAG LE+A  ++  M    +A +++T+L ACR               ++L P D A+Y
Sbjct: 675 LGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALY 734

Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH-PQSNQI 731
           +LL+++Y  +G  +   + R LM ++++ K+ G S +EV+ K +SF++ D++   ++N I
Sbjct: 735 ILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGI 794

Query: 732 YSKLEELSTRLKDAG--YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
           Y+++E +   +K  G  Y+ + +               S HS + A+ +G +     AP+
Sbjct: 795 YAEIESIKEEIKRFGSPYRGNEN--------------ASFHSAKQAVVYGFIYASPEAPV 840

Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
            +VKN  +C DCH  + ++++L  + I VRD N+ H FK G CSC
Sbjct: 841 HVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 287/559 (51%), Gaps = 23/559 (4%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           G  +HC  +K G   ++++  +L+ LY++T+ + + R++FD+M+   V +WT ++S + +
Sbjct: 42  GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
           ++     L LF  M   G  PN FTFS+V+   A    ++   +VH  VIK G E  + V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            ++L  +Y K    ++A  +F  +++ D+I+W  M++  V      EA + ++ M  AG 
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                TFV ++   ++   L   + +HS ++  GI  +  ++T L+  YS+  KMEDA +
Sbjct: 222 PPNEFTFVKLLG-ASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           + +   E +DV  WT+++SG ++N     AV  F +M   G++PN FTYS IL+   AV 
Sbjct: 281 VLNSSGE-QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD-EAAKVFELIDEKDIVAWSAML 451
                 Q+H+  IK  +E S  VG AL++ Y+K    + EA++VF  +   ++V+W+ ++
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
            G    G  +    +  ++    V+PN  T S V+ AC+     V +  + HA  ++  +
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLR-HVRRVLEIHAYLLRRHV 458

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           +  + V ++LV  Y+    ++ A  V +  ++RD +++ S++  + + G  + AL V   
Sbjct: 459 DGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINY 518

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS-------CMV 624
           M    +  D ++  G I+A  + G ++ G+          H Y     +S        +V
Sbjct: 519 MYGDGIRMDQLSLPGFISASANLGALETGKHL--------HCYSVKSGFSGAASVLNSLV 570

Query: 625 DLYSRAGMLEKAMDIINRM 643
           D+YS+ G LE A  +   +
Sbjct: 571 DMYSKCGSLEDAKKVFEEI 589



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 162/323 (50%), Gaps = 8/323 (2%)

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
           + ++  C +    R+   +H  V+K G+  + ++   L+  Y K   + +A K+F  M  
Sbjct: 28  IRILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----Q 399
            + V +WT MIS   ++     A++ F +M   G  PN FT+S ++ +   +       +
Sbjct: 87  -RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGR 145

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           VH  +IKT +E +  VG++L + Y K G   EA ++F  +   D ++W+ M++       
Sbjct: 146 VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARK 205

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
              A++ Y ++   GV PNEFTF  ++ A +     +E GK  H+  I   +   + + +
Sbjct: 206 WREALQFYSEMVKAGVPPNEFTFVKLLGASSF--LGLEFGKTIHSNIIVRGIPLNVVLKT 263

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           +LV  YS+   +E A  V     ++D+  W S++ G+ ++   K+A+  F EMR   L+ 
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323

Query: 580 DGITFIGVITACTHAGLVDEGQQ 602
           +  T+  +++ C+    +D G+Q
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQ 346


>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Brachypodium distachyon]
          Length = 892

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/615 (37%), Positives = 352/615 (57%), Gaps = 59/615 (9%)

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI--DFDHNIRTGLMVAYSKCGKMED 333
           A LT    VS++  C+T    R A +LH+ VL+ G+    D  +   L  AY+  G+++ 
Sbjct: 285 AVLTADRAVSLLTSCSTA---RRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDL 341

Query: 334 ASKIFSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +    +++R  +D   + +T+ I  H   G    A+     M  +G+ P   T S  L A
Sbjct: 342 S---LALLRRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPA 398

Query: 392 QPAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKG----------------------- 427
              +SP + +H +  K        V TALL  Y + G                       
Sbjct: 399 CRGLSPGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTA 458

Query: 428 ---------ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
                     LD+A  +F+ +  KD V W+AM+ GY Q G    A++++R++   GV+P+
Sbjct: 459 MLTCYADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPD 518

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAK-LNNALCVSSALVTMYSKKGNIESASEV 537
           E T   V++A  A    VE GK  H+    ++ +  ++ V +AL+ MY K G++  A +V
Sbjct: 519 EVTVVLVLSA-VAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDV 577

Query: 538 FKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLV 597
           F     +D+V WN+MI GYA HG ++KALE+F + R Q L    ITFIG++ AC+H+G+V
Sbjct: 578 FHGIGDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMV 637

Query: 598 DEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLA 657
           +EG+++F  M  E+ I P +EHY CMVDL  RAG++++A  ++  M     A +W ++LA
Sbjct: 638 EEGREFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLA 697

Query: 658 ACRL---ISLQPH-----------DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
           ACRL   +SL              +S +Y+LLSN+YAA G+W E ARVR +M    ++KE
Sbjct: 698 ACRLHKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKE 757

Query: 704 AGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHK 763
            G S IE+  + Y F+AGD+SHP++++IY  L++++  +K+ G+ P T  VL D+D+  K
Sbjct: 758 PGCSSIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATK 817

Query: 764 EAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNR 823
           E  L+ HSE+LA+AFGL++T  GA ++IVKNLR C DCH V+KLIS++  R IV RD NR
Sbjct: 818 EKALAVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRDRNR 877

Query: 824 FHHFKEGLCSCGDYW 838
           FHHF +G CSCGDYW
Sbjct: 878 FHHFVDGSCSCGDYW 892



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 45/333 (13%)

Query: 62  ALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVD 121
           AL L   +   GL     TLS+ L  C  L     GR +H    K   A D  V+T+L+ 
Sbjct: 373 ALALLSDMLAQGLLPTAHTLSASLPACRGLSP---GRALHGYAFKLALAGDSYVATALLG 429

Query: 122 LYMRTNN--------------------------------VEDGRRVFDDMNESNVVSWTS 149
           +Y R  +                                ++D R +FD +   + V W +
Sbjct: 430 MYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPTKDFVCWNA 489

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++ GY ++   +  L LF RM   G++P+  T   VL  +A  G V +   +H+ V KN 
Sbjct: 490 MIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGKWLHSYV-KNS 548

Query: 210 GEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
             V  S  V  ALI MY K   + DA  VF G+ D+D + WN+M+ GY  +    +A E 
Sbjct: 549 RRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMHGDSRKALEM 608

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GID--FDHNIRTGLMV- 323
           F      G   T  TF+ ++  C+ +  +   R+    + +  GID   +H    G MV 
Sbjct: 609 FVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEHY---GCMVD 665

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
              + G +++A  +   M+   D V W ++++ 
Sbjct: 666 LLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAA 698



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 111/226 (49%), Gaps = 3/226 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +SLFD  P ++FV +N ++  Y +     EAL LF  +   G+     T+  VL     L
Sbjct: 473 RSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQL 532

Query: 92  FDHVFGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G+ +H     S   +  V V T+L+D+Y +  ++ D   VF  + + ++V W ++
Sbjct: 533 GTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAM 592

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNG 209
           ++GYA +  + + LE+F + + +G+ P   TF  +L   +  G+V    +   +M  + G
Sbjct: 593 INGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYG 652

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAG 254
            +        ++ +  ++ ++++A  +   M+   D++ W S++A 
Sbjct: 653 IDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAA 698


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/604 (37%), Positives = 350/604 (57%), Gaps = 23/604 (3%)

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           AG+  + LH+   E  +      A+  + T    +K C+    L + R + +  +K G+ 
Sbjct: 96  AGHPEDALHL-FIEMLHAASACPAD--QHTAACALKSCSRMCALDVGRGVQAYAVKRGLV 152

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            D  + + L+  Y+ CG +  A  +F    E   VV W A+++ +L+NG     V  F  
Sbjct: 153 ADRFVLSSLIHMYASCGDVAAARLVFDAAEE-SGVVMWNAIVAAYLKNGDWMEVVEMFKG 211

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M   GV  +  T   ++TA   +   +    V  H+ +    ++  + TAL++ Y K G 
Sbjct: 212 MLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGE 271

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           + +A ++F+ +  +D+VAWSAM++GY Q      A+ ++ ++    V+PN+ T  SV++A
Sbjct: 272 IGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSA 331

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C A   A+E GK  H+   + +L+    + +ALV  Y+K G I+ A E F+    ++  +
Sbjct: 332 C-AVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWT 390

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           W ++I G A +G  ++ALE+F  MR   +E   +TFIGV+ AC+H+ LV+EG+++FD M 
Sbjct: 391 WTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMA 450

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------- 659
            ++ I P +EHY CMVDL  RAG++++A   I  MP   +A +WR +L++C         
Sbjct: 451 RDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIG 510

Query: 660 -----RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNK 714
                ++ISL P  S  YVLLSN+YA+ G W++ A VRK M DR ++K  G S IE+   
Sbjct: 511 EEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGV 570

Query: 715 TYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERL 774
            + F A D  HP+  +IY K+EE+  R+K AGY P+T+ V  ++++  KE  +S HSE+L
Sbjct: 571 VFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKL 630

Query: 775 AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           AIAFGL+    GA +++ KNLRVC DCH+  KLISK+  R+IVVRD N FHHFK+G CSC
Sbjct: 631 AIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSC 690

Query: 835 GDYW 838
            DYW
Sbjct: 691 NDYW 694



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 16/382 (4%)

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           V    +K G      V ++LI MY     V  AR VFD  E+   + WN++VA Y+ N  
Sbjct: 142 VQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
            ME  E F  M   G      T VSV+  C    + +L + +   V + G+  +  + T 
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA 261

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           LM  Y+KCG++  A ++F  M+  +DVV+W+AMISG+ Q      A+  F +M    V P
Sbjct: 262 LMDMYAKCGEIGKARRLFDGMQS-RDVVAWSAMISGYTQADQCREALGLFSEMQLARVEP 320

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           N  T   +L+A   +   +    VH+++ +     +  +GTAL++ Y K G +D+A + F
Sbjct: 321 NDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAF 380

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
           E +  K+   W+A++ G A  G    A++++  +   G++P + TF  V+ AC+  S  V
Sbjct: 381 ESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSH-SCLV 439

Query: 497 EQGKQ-FHACS----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWN 550
           E+G++ F + +    IK ++ +  C    +V +  + G ++ A +  +    + + V W 
Sbjct: 440 EEGRRHFDSMARDYGIKPRVEHYGC----MVDLLGRAGLVDEAYQFIRTMPIEPNAVIWR 495

Query: 551 SMICGYAQHGHTKKALEVFKEM 572
           +++   A H +     E  K++
Sbjct: 496 ALLSSCAVHRNVGIGEEALKQI 517



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 205/457 (44%), Gaps = 18/457 (3%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVE--YNRLLFEYCRDSLHQEALNLFLGIRRLG--LPLFGS 79
           SP       SLF   P+       YN L+  +      ++AL+LF+ +       P    
Sbjct: 62  SPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQH 121

Query: 80  TLSSVLKTCG--CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
           T +  LK+C   C  D   GR V    VK G   D  V +SL+ +Y    +V   R VFD
Sbjct: 122 TAACALKSCSRMCALD--VGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFD 179

Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
              ES VV W ++++ Y +N     V+E+F  M   G+  +  T  +V+      G    
Sbjct: 180 AAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKL 239

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
              V   V + G      +  AL+ MY K   +  AR +FDGM+ RD + W++M++GY  
Sbjct: 240 GKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQ 299

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
            +   EA   F+ M LA  E    T VSV+  CA    L   + +HS V +  +     +
Sbjct: 300 ADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTIL 359

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            T L+  Y+KCG ++DA + F  M  +K+  +WTA+I G   NG    A+  F  M   G
Sbjct: 360 GTALVDFYAKCGCIDDAVEAFESM-PVKNSWTWTALIKGMATNGRGREALELFSSMREAG 418

Query: 378 VRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEA 432
           + P   T+  +L A      V   + H   +  +Y     V     +++   + G++DEA
Sbjct: 419 IEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEA 478

Query: 433 AKVFELID-EKDIVAWSAMLAGYA---QIGDTEGAVK 465
            +    +  E + V W A+L+  A    +G  E A+K
Sbjct: 479 YQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALK 515


>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
          Length = 662

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/534 (40%), Positives = 326/534 (61%), Gaps = 22/534 (4%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  +   G  + A ++F+ M  ++DVVSW  M+SG  ++GA++ A   F  M    VR 
Sbjct: 135 LLSCHFASGDADGARRLFASM-PVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP---VR- 189

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV-GTALLNAYVKKGILDEAAKVFELI 439
           N  +++ +++               +   EK  +V  TA+++ Y+  G + +A + FE +
Sbjct: 190 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 249

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQ 498
             +++V+W+A++AGY +    + A++++R +  E  V+PN  T SSV+  C+  SA +  
Sbjct: 250 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA-LGF 308

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           GKQ H   +K  L+  L V ++LV+MY K G++ SA ++F     RD+V+WN+MI GYAQ
Sbjct: 309 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQ 368

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG  K+A+ +F+ M+ + +E + ITF+ V+TAC H GL D G + F+ M   + I P ++
Sbjct: 369 HGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVD 428

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISL 664
           HYSCMVDL  RAG LE+A+D+I  MPF    + + T+LAACR              LI  
Sbjct: 429 HYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEK 488

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P  +  YV L+N+YA    W + +RVR+ M D  V K  GYSWIE+K   + F + D  
Sbjct: 489 DPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRL 548

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           HPQ   I+ KL +L+ R+K  GY PD  +VL D+D+  K  +L +HSE+LAI+FGL++T 
Sbjct: 549 HPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTA 608

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G  L+I KNLRVCGDCH   K+ISK+E R+I++RDT RFHHF+ G CSCGDYW
Sbjct: 609 PGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 189/393 (48%), Gaps = 57/393 (14%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR--NKMNDR 162
           + S  +   ++ST  V   +R  ++      F         ++  LL+GYAR   ++ D 
Sbjct: 58  LASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLAD- 116

Query: 163 VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGGEVVTSVCNALI 221
              LF R+      P++ +++T+L      G    A ++  +M ++   +VV+   N ++
Sbjct: 117 ARHLFDRIPT----PDAVSYNTLLSCHFASGDADGARRLFASMPVR---DVVS--WNTMV 167

Query: 222 SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS 281
           S   KS  V +A+AVF  M  R+S++WN+MV+G+  +     A E F N    G      
Sbjct: 168 SGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG------ 221

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
                                           D  + T ++  Y   G +  A + F  M
Sbjct: 222 --------------------------------DAVLWTAMVSGYMDIGNVVKAIEYFEAM 249

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF-- 398
             ++++VSW A+++G+++N   D A+  F  M RE  V+PN  T S +L     +S    
Sbjct: 250 -PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 308

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             Q+H   +K    ++ +VGT+L++ Y K G L  A K+F  +  +D+VAW+AM++GYAQ
Sbjct: 309 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQ 368

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            GD + A+ ++ ++  EGV+PN  TF +V+ AC
Sbjct: 369 HGDGKEAINLFERMKDEGVEPNWITFVAVLTAC 401



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 48/378 (12%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +L+  +  + + +  RR+F  M   +VVSW +++SG +++   +    +F  M V     
Sbjct: 134 TLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR---- 189

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           NS +++ ++   A    ++ A +      + G  V+ +   A++S Y+    V  A   F
Sbjct: 190 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWT---AMVSGYMDIGNVVKAIEYF 246

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKEL 296
           + M  R+ ++WN++VAGYV N    +A   F  M   A  +   ST  SV+  C+    L
Sbjct: 247 EAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSAL 306

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
              +Q+H   +K  +  +  + T L+  Y KCG +  A K+F  M   +DVV+W AMISG
Sbjct: 307 GFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM-HTRDVVAWNAMISG 365

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG 416
           + Q+G    A+N F +M  EGV PN  T+                               
Sbjct: 366 YAQHGDGKEAINLFERMKDEGVEPNWITF------------------------------- 394

Query: 417 TALLNAYVKKGILDEAAKVFELID-----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            A+L A +  G+ D   + FE +      E  +  +S M+    + G  E AV + R + 
Sbjct: 395 VAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMP 454

Query: 472 SEGVKPNEFTFSSVINAC 489
            E   P+   + +++ AC
Sbjct: 455 FE---PHPSAYGTLLAAC 469



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 1/161 (0%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGCLFD 93
           F+  P RN V +N ++  Y ++S   +AL LF   +R   +    STLSSVL  C  L  
Sbjct: 246 FEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA 305

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG+Q+H  C+K   +R++ V TSLV +Y +  ++    ++F +M+  +VV+W +++SG
Sbjct: 306 LGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISG 365

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           YA++      + LF RM+ EG++PN  TF  VL      G+
Sbjct: 366 YAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 406



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 10/264 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           + LF   P R+ V +N ++    +    +EA  +FL      +P+  S + ++++    C
Sbjct: 149 RRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLA-----MPVRNSVSWNAMVSGFAC 203

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
             D     +      + G   D  + T++V  YM   NV      F+ M   N+VSW ++
Sbjct: 204 SRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAV 260

Query: 151 LSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++GY +N   D  L LF  M  E  ++PN+ T S+VL   ++   +    Q+H   +K  
Sbjct: 261 VAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLP 320

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                +V  +L+SMY K   +  A  +F  M  RD + WN+M++GY  +    EA   F 
Sbjct: 321 LSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFE 380

Query: 270 NMGLAGAELTRSTFVSVIKLCATT 293
            M   G E    TFV+V+  C  T
Sbjct: 381 RMKDEGVEPNWITFVAVLTACIHT 404



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 67/291 (23%)

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI---------------- 457
           S+ T  + A V++G L  A + F     K    ++ +LAGYA+                 
Sbjct: 67  SLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT 126

Query: 458 ----------------GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
                           GD +GA +++  +    V     +++++++  +  S AVE+ K 
Sbjct: 127 PDAVSYNTLLSCHFASGDADGARRLFASMPVRDV----VSWNTMVSGLSK-SGAVEEAKA 181

Query: 502 -FHACSIKAKLNNALCVS---------------------------SALVTMYSKKGNIES 533
            F A  ++  ++    VS                           +A+V+ Y   GN+  
Sbjct: 182 VFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVK 241

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACT 592
           A E F+    R+LVSWN+++ GY ++ H   AL +F+ M R+ +++ +  T   V+  C+
Sbjct: 242 AIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCS 301

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +   +  G+Q     + +  +   +   + +V +Y + G L  A  +   M
Sbjct: 302 NLSALGFGKQIHQWCM-KLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM 351


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/581 (39%), Positives = 343/581 (59%), Gaps = 26/581 (4%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T+  +I  C     L  A+++H  +L+NG D D  + T L+  YS    +++A K+F   
Sbjct: 72  TYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKT 131

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF--- 398
           R  + +  + A+       G  +  +N + +M   G+  + FTY+ +L A  A   F   
Sbjct: 132 RN-RTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSL 190

Query: 399 -----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                ++HAHI++  Y+    + T L++ Y K G +  A+ VF  +  K++V+WSAM+A 
Sbjct: 191 LNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIAC 250

Query: 454 YAQIGDTEGAVKIYRQLT--SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           YA+ G    A++++R+L   ++ + PN  T  SV+ A  A  AA+EQG+  H   ++  L
Sbjct: 251 YAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQA-CAALAALEQGRLIHGYILRKGL 309

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
           ++ L V SALVTMY++ G +E    VF +  KRD+VSWNS+I  Y  HG  KKA+ +F+E
Sbjct: 310 DSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEE 369

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M    +E   I+F+ V+ AC+HAGLVDEG+  F+ M   H I P++EHY+CMVDL  RA 
Sbjct: 370 MTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRAN 429

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
            LE+A  II  M       VW ++L +CR              L  L+P ++  YVLL++
Sbjct: 430 RLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLAD 489

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA  G W    RV+KL+  R ++K  G SWIEVK K YSF++ D  +P+  Q+++ L +
Sbjct: 490 IYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVK 549

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           LS  LK+ GY P T  VL D+    KE I+  HSE+LA+AFGL+ +  G  ++I K+LR+
Sbjct: 550 LSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRL 609

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH+  K ISK   ++I+VRD NRFHHF++G+CSCGDYW
Sbjct: 610 CEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 193/394 (48%), Gaps = 17/394 (4%)

Query: 4   SPALKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEAL 63
           SP    L +  T  P  SL+ P  S         +P  +  + N+L+   C+     +AL
Sbjct: 6   SPKTTLLPSNATFLPRPSLKPPICS------ITLNPTASTADNNKLIQSLCKQGNLTQAL 59

Query: 64  NLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY 123
            L      L       T   ++ +C      +  ++VH   +++GF +D  ++T L+++Y
Sbjct: 60  ELL----SLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMY 115

Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
              +++++ R+VFD      +  + +L    +     + VL ++ RM   GI  + FT++
Sbjct: 116 SFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYT 175

Query: 184 TVL-GVLADEGIVA---TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
            VL   +A E  V+      ++H  ++++G +    +   L+ MY K   V +A  VF+ 
Sbjct: 176 YVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQ 235

Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELR 297
           M  ++ ++W++M+A Y  N    EA E F  + L   +L  +  T VSV++ CA    L 
Sbjct: 236 MPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALE 295

Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
             R +H  +L+ G+D    + + L+  Y++CGK+E   ++F  M + +DVVSW ++IS +
Sbjct: 296 QGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQM-DKRDVVSWNSLISSY 354

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
             +G    A+  F +MT  GV P+  ++  +L A
Sbjct: 355 GVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGA 388



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 171/350 (48%), Gaps = 9/350 (2%)

Query: 26  FYSKKDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS 83
           F+   D +  +FD++  R    YN L          +E LN++  +  +G+P    T + 
Sbjct: 117 FFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTY 176

Query: 84  VLKTC---GCLFDHVF-GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           VLK C    C    +  GR++H   ++ G+   V++ T+LVD+Y +   V +   VF+ M
Sbjct: 177 VLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQM 236

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE--GIKPNSFTFSTVLGVLADEGIVAT 197
              NVVSW+++++ YA+N      LELF  + +E   + PNS T  +VL   A    +  
Sbjct: 237 PVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQ 296

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
              +H  +++ G + +  V +AL++MY +   +   + VFD M+ RD ++WNS+++ Y  
Sbjct: 297 GRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGV 356

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHN 316
           +    +A   F  M   G E +  +FVSV+  C+    +   + L +S  + +GI     
Sbjct: 357 HGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVE 416

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
               ++    +  ++E+A+KI   MR       W +++     +  ++LA
Sbjct: 417 HYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELA 466


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/624 (34%), Positives = 344/624 (55%), Gaps = 86/624 (13%)

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH--------------NIRTG-- 320
           +L   T+ SV++LCA  K ++  R++HS +  N ++ D               ++R G  
Sbjct: 98  DLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRR 157

Query: 321 ---------------LMVAYSKCGKMEDASKIFSMMREM-----------------KDVV 348
                          LM  Y+K G   ++  +F  MRE+                 +DV+
Sbjct: 158 IFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVI 217

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTN 408
           SW +MISG++ NG  +  ++ F QM   G+  +                       + T 
Sbjct: 218 SWNSMISGYVSNGLSEKGLDLFEQMLLLGINTD-----------------------LATM 254

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                ++   LL+ Y K G L+ A +VFE + E+ +V+W++M+AGYA+ G ++ +V+++ 
Sbjct: 255 VSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFH 314

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           ++  E + PN  T + ++ AC A  AA+E+G++ H   ++   +    V++ALV MY K 
Sbjct: 315 EMEKEDLFPNSITMACILPAC-ASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKC 373

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G +  A  +F    ++DLVSW  MI GY  HG+  +A+  F EMR   +E D ++FI ++
Sbjct: 374 GALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 433

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
            AC+H+GL+DEG  +F++M N   I P  EHY+C+VDL +RAG L KA   I  MP    
Sbjct: 434 YACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPD 493

Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           AT+W  +L  CR+                L+P ++  YVLL+N+YA    W+E  ++R+ 
Sbjct: 494 ATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRER 553

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           +  R ++K  G SWIE+K K + F+ GD SHP +N+I   L++  TR+K+ G+ P   Y 
Sbjct: 554 IGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYA 613

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
           L   DD  KE  L  HSE++A+AFG+++ P G  +++ KNLRVCGDCH + K +SK+ +R
Sbjct: 614 LIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKR 673

Query: 815 DIVVRDTNRFHHFKEGLCSCGDYW 838
           DI++RD+NRFHHFK+G CSC  +W
Sbjct: 674 DIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 242/536 (45%), Gaps = 97/536 (18%)

Query: 43  FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHC 102
             +YN  +  +C     + A+ L     +  L L   T  SVL+ C  L     GR++H 
Sbjct: 68  ITDYNIEICRFCELGNLRRAMELINQSPKPDLEL--RTYCSVLQLCADLKSIQDGRRIHS 125

Query: 103 ECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDR 162
               +    D  + + LV +Y+   ++ +GRR+FD +    V  W  L++GYA+      
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185

Query: 163 VLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS 222
            L LF RM+  GI                                               
Sbjct: 186 SLSLFKRMRELGI----------------------------------------------- 198

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
                + V  AR +FD + DRD I+WNSM++GYV+N L  +  + F  M L G     +T
Sbjct: 199 -----RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLAT 253

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
            VSV        EL L                      L+  YSK G +  A ++F  M 
Sbjct: 254 MVSV--------ELTL-------------------NNCLLDMYSKSGNLNSAIQVFETMG 286

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF---- 398
           E + VVSWT+MI+G+ + G  D++V  F +M +E + PN  T + IL A  +++      
Sbjct: 287 E-RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQ 345

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           ++H HI++  +     V  AL++ Y+K G L  A  +F++I EKD+V+W+ M+AGY   G
Sbjct: 346 EIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 405

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-----HACSIKAKLNN 513
               A+  + ++ + G++P+E +F S++ AC+  S  +++G  F     + C I+ K  +
Sbjct: 406 YGSEAIAAFNEMRNSGIEPDEVSFISILYACSH-SGLLDEGWGFFNMMRNNCCIEPKSEH 464

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
             C+    V + ++ GN+  A +  K    + D   W +++CG   +   K A +V
Sbjct: 465 YACI----VDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKV 516



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 50/337 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD    R+ + +N ++  Y  + L ++ L+LF  +  LG+    +T+ SV       
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV------- 257

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                               ++ ++  L+D+Y ++ N+    +VF+ M E +VVSWTS++
Sbjct: 258 --------------------ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMI 297

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYAR  ++D  + LFH M+ E + PNS T + +L   A    +    ++H  +++NG  
Sbjct: 298 AGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFS 357

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V NAL+ MYLK   +  AR +FD + ++D ++W  M+AGY  +    EA   FN M
Sbjct: 358 LDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEM 417

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA------- 324
             +G E    +F+S++  C+           HS +L  G  F + +R    +        
Sbjct: 418 RNSGIEPDEVSFISILYACS-----------HSGLLDEGWGFFNMMRNNCCIEPKSEHYA 466

Query: 325 -----YSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
                 ++ G +  A K   MM    D   W A++ G
Sbjct: 467 CIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 503


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/823 (29%), Positives = 412/823 (50%), Gaps = 114/823 (13%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD+  +RN   +  ++  YC    ++E + LF  +   G+         V K C  L +
Sbjct: 146 MFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKN 205

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
           +  G+ V+   +  GF  +  V  S++D++++   ++  RR F+++   +V  W  ++SG
Sbjct: 206 YRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSG 265

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y       + L+    M++ G+KP+  T+                               
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTW------------------------------- 294

Query: 214 TSVCNALISMYLKSKMVRDARAVF---DGMED--RDSITWNSMVAGYVTNELHMEAFETF 268
               NA+IS Y +S    +A   F    G++D   + ++W +++AG   N    EA   F
Sbjct: 295 ----NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVF 350

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSK 327
             M L G +    T  S +  C     LR  R++H   +K   +D D  +   L+  Y+K
Sbjct: 351 RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 410

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           C  +E A + F M+++  D+VSW AM++G+   G+ + A+    +M  +G+ P+  T++ 
Sbjct: 411 CRSVEVARRKFGMIKQ-TDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469

Query: 388 ILTA-------QPAVSPFQ--------------------------------VHAHIIKTN 408
           ++T        + A+  FQ                                +H ++++ +
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH 529

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
            E S  VG+AL++ Y     L+ A  VF  +  +D+V W+++++  AQ G +  A+ + R
Sbjct: 530 IELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLR 589

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           ++    V+ N  T  S + AC+   AA+ QGK+ H   I+  L+    + ++L+ MY + 
Sbjct: 590 EMNLSNVEVNTVTMVSALPACSKL-AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRC 648

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G+I+ +  +F    +RDLVSWN MI  Y  HG    A+ +F+  R   L+ + ITF  ++
Sbjct: 649 GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLL 708

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
           +AC+H+GL++EG +YF +M  E+ + P +E Y+CMVDL SRAG   + ++ I +MPF  +
Sbjct: 709 SACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 768

Query: 649 ATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A VW ++L ACR              L  L+P  S  YVL++N+Y+A G W++ A++R L
Sbjct: 769 AAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCL 828

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
           M +R V K  G SWIEVK K +SF+ GD SHP   QI  K  +L                
Sbjct: 829 MKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKL---------------- 872

Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
             D+D++ KE  L  HSE++A+AFGL++T  G PL+I+KNLRV
Sbjct: 873 --DVDEDEKEFSLCGHSEKIALAFGLISTTXGTPLRIIKNLRV 913



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 296/607 (48%), Gaps = 81/607 (13%)

Query: 82  SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           +S+L+ C  L++   G QVH + V +G      + + L+++Y +T  VED RR+FD M+E
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            NV SWT+++  Y      +  ++LF+ M  EG++P+ F F  V    ++         V
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           +  ++  G E  + V  +++ M++K   +  AR  F+ +E +D   WN MV+GY +    
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            +A +  ++M L+G +  + T+ ++I                                  
Sbjct: 273 KKALKCISDMKLSGVKPDQVTWNAIIS--------------------------------- 299

Query: 322 MVAYSKCGKMEDASKIFSMMREMKD----VVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              Y++ G+ E+ASK F  M  +KD    VVSWTA+I+G  QNG    A++ F +M  EG
Sbjct: 300 --GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEA 432
           V+PN  T +  ++A   +S      ++H + IK    +    VG +L++ Y K   ++ A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 433 AKVFELIDEKDIVAWSAMLAGYA-----------------------------------QI 457
            + F +I + D+V+W+AMLAGYA                                   Q 
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           GD + A++ ++++ S G+ PN  T S  + AC      ++ GK+ H   ++  +  +  V
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAAC-GQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            SAL++MYS   ++E A  VF     RD+V WNS+I   AQ G +  AL++ +EM   ++
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           E + +T +  + AC+    + +G++    ++    +       + ++D+Y R G ++K+ 
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFII-RCGLDTCNFILNSLIDMYGRCGSIQKSR 655

Query: 638 DIINRMP 644
            I + MP
Sbjct: 656 RIFDLMP 662



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 235/500 (47%), Gaps = 74/500 (14%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH  ++ NG +V   + + L+ +Y ++  V DAR +FD M +R+  +W +++  Y    
Sbjct: 110 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
            + E  + F  M   G       F  V K C+  K  R+ + ++  +L  G + +  ++ 
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
            ++  + KCG+M+ A + F  + E KDV  W  M+SG+   G    A+     M   GV+
Sbjct: 230 SILDMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVK 288

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-EL 438
           P+  T++                               A+++ Y + G  +EA+K F E+
Sbjct: 289 PDQVTWN-------------------------------AIISGYAQSGQFEEASKYFLEM 317

Query: 439 IDEKD----IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
              KD    +V+W+A++AG  Q G    A+ ++R++  EGVKPN  T +S ++ACT  S 
Sbjct: 318 GGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSL 377

Query: 495 AVEQGKQFHACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            +  G++ H   IK + L++ L V ++LV  Y+K  ++E A   F   ++ DLVSWN+M+
Sbjct: 378 -LRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIM------ 607
            GYA  G  ++A+E+  EM+ Q +E D IT+ G++T  T  G      ++F  M      
Sbjct: 437 AGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMD 496

Query: 608 ----------------------------VNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
                                       V  +HI  +    S ++ +YS    LE A  +
Sbjct: 497 PNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV 556

Query: 640 INRMPFAASATVWRTVLAAC 659
            + +       VW ++++AC
Sbjct: 557 FSELS-TRDVVVWNSIISAC 575



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 138/278 (49%), Gaps = 4/278 (1%)

Query: 398 FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
           FQVHA ++    +    +G+ LL  Y + G +++A ++F+ + E+++ +W+A++  Y  +
Sbjct: 109 FQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGL 168

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           GD E  +K++  + +EGV+P+ F F  V  AC+        GK  +   +        CV
Sbjct: 169 GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK-NYRVGKDVYDYMLSIGFEGNSCV 227

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
             +++ M+ K G ++ A   F+    +D+  WN M+ GY   G  KKAL+   +M+   +
Sbjct: 228 KGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D +T+  +I+    +G  +E  +YF  M       P +  ++ ++    + G   +A+
Sbjct: 288 KPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEAL 347

Query: 638 DIINRMPFAA---SATVWRTVLAACRLISLQPHDSAIY 672
            +  +M       ++    + ++AC  +SL  H   I+
Sbjct: 348 SVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 81/173 (46%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           S+F     R+ V +N ++    +      AL+L   +    + +   T+ S L  C  L 
Sbjct: 555 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 614

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
               G+++H   ++ G      +  SL+D+Y R  +++  RR+FD M + ++VSW  ++S
Sbjct: 615 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 674

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
            Y  +      + LF   +  G+KPN  TF+ +L   +  G++    +   M+
Sbjct: 675 VYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           +K + +FD  PQR+ V +N ++  Y       +A+NLF   R +GL     T +++L  C
Sbjct: 652 QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSAC 711

Query: 89  --GCLFDHVFGRQVHCECVKSGFARDVNVS--TSLVDLYMRTNNVEDGRRVFDDMN-ESN 143
               L +  +    + + +K+ +A D  V     +VDL  R     +     + M  E N
Sbjct: 712 SHSGLIEEGWK---YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPN 768

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
              W SLL G  R   N  + E   R   E ++P S
Sbjct: 769 AAVWGSLL-GACRIHCNPDLAEYAARYLFE-LEPQS 802


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/689 (33%), Positives = 382/689 (55%), Gaps = 29/689 (4%)

Query: 79  STLSSVLKTCGCLFDHVF---GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRV 135
           + L S+LKTC    D  +   G+ +H + V  G   ++ +  SL++LY   +  +  + V
Sbjct: 4   TKLLSLLKTC---IDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 136 FDDM-NESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEG 193
           F  + N  ++  W  L++   +N +    LE+FHR+     +KP++FT+ +VL   +  G
Sbjct: 61  FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
            V     VHT VIK+G  +   V ++ + MY K  +  DA  +FD M +RD  +WN++++
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180

Query: 254 GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF 313
            Y  +    +A E F  M ++G +    T  +VI  CA   +L   +++H +++++G   
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240

Query: 314 DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
           D  + + L+  Y KCG +E A ++F  ++  K+VVSW +MI+G+   G     +  F +M
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQR-KNVVSWNSMIAGYSLKGDSKSCIELFRRM 299

Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
             EG+RP   T S IL A       Q    +H +II+   E    V ++L++ Y K G +
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             A  VF+ + + ++V+W+ M++GY ++G    A+ I+  +   GVKP+  TF+SV+ AC
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 419

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
           +   A +E+GK+ H   I++KL     V  AL+ MY+K G ++ A  +F +  +RD VSW
Sbjct: 420 SQ-LAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSW 478

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
            SMI  Y  HG   +AL++F++M++ D + D +TF+ +++AC+HAGLVDEG  YF+ M+ 
Sbjct: 479 TSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIA 538

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP-FAASATVWRTVLAACR-------- 660
           E+   P +EHYSC++DL  R G L +A +I+ R P       +  T+ +AC         
Sbjct: 539 EYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLG 598

Query: 661 ------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNK 714
                 LI   P D + Y++LSNMYA+   W E  +VR  + +  +KK  G SWIEV  +
Sbjct: 599 EQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKR 658

Query: 715 TYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            + F+  D SHPQ++ IY  +  L++ ++
Sbjct: 659 IHPFVVEDKSHPQADMIYECMSILASHVE 687



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 200/358 (55%), Gaps = 1/358 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD  P+R+   +N ++  Y +D   ++AL LF  ++  G      TL++V+ +C  L D
Sbjct: 163 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 222

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+++H E V+SGFA D  VS++LVD+Y +   +E  + VF+ +   NVVSW S+++G
Sbjct: 223 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 282

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y+    +   +ELF RM  EGI+P   T S++L   +    +     +H  +I+N  E  
Sbjct: 283 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 342

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V ++LI +Y K   +  A  VF  M   + ++WN M++GYV    ++EA   F +M  
Sbjct: 343 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 402

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
           AG +    TF SV+  C+    L   +++H+ ++++ ++ +  +   L+  Y+KCG +++
Sbjct: 403 AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDE 462

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           A  IF+ + E +D VSWT+MI+ +  +G    A+  F +M +   +P+  T+  IL+A
Sbjct: 463 ALHIFNQLPE-RDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSA 519



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 141/260 (54%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +F++  ++N V +N ++  Y      +  + LF  +   G+    +TLSS+L  C   
Sbjct: 262 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 321

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            +   G+ +H   +++    D+ V++SL+DLY +  N+     VF +M ++NVVSW  ++
Sbjct: 322 VNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMI 381

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY +       L +F  M+  G+KP++ TF++VL   +   ++    ++H  +I++  E
Sbjct: 382 SGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLE 441

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +   V  AL+ MY K   V +A  +F+ + +RD ++W SM+A Y ++    EA + F  M
Sbjct: 442 INEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 501

Query: 272 GLAGAELTRSTFVSVIKLCA 291
             + A+  + TF++++  C+
Sbjct: 502 QQSDAKPDKVTFLAILSACS 521



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 1/212 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +++F   P+ N V +N ++  Y +   + EAL +F  +R+ G+     T +SVL  C  L
Sbjct: 363 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 422

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+++H   ++S    +  V  +L+D+Y +   V++   +F+ + E + VSWTS++
Sbjct: 423 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMI 482

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV-QVHTMVIKNGG 210
           + Y  +      L+LF +MQ    KP+  TF  +L   +  G+V       + M+ + G 
Sbjct: 483 AAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGF 542

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMED 242
           +      + LI +  +   +R+A  +     D
Sbjct: 543 KPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 574


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/662 (33%), Positives = 362/662 (54%), Gaps = 64/662 (9%)

Query: 200 QVHTMVIKNG--------GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
           Q H ++++ G        G +V S  N   + YL       +  VFD +   +   WN M
Sbjct: 53  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLS---FESSLRVFDFVRKPNVFLWNCM 109

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +   + N    +A   +  M +A +   + T+ +V+K C+ +  +    Q+H+ ++K+G+
Sbjct: 110 IKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGL 169

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
             D +I +  +  Y+  G++ +A +I        D V W AMI G+L+ G ++ A   F 
Sbjct: 170 GGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFE 229

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
            M    +                                   S   A+++ + + G+++ 
Sbjct: 230 GMPDRSM----------------------------------ISTWNAMISGFSRCGMVEV 255

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A + F+ + E+D ++WSAM+ GY Q G    A++I+ Q+  E ++P +F   SV++AC A
Sbjct: 256 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC-A 314

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
              A++QG+  H  + +  +     + ++LV MY+K G I+ A EVF++   +++ SWN+
Sbjct: 315 NLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNA 374

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           MI G A HG  + A+++F +M   D+  + ITF+GV+ AC H GLV +G   F+ M  E+
Sbjct: 375 MIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEY 431

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----------- 660
            + P +EHY C+VDL  RAG+L +A  +++ +P   +  VW  +L ACR           
Sbjct: 432 GVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERV 491

Query: 661 ---LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV-KNKTY 716
              L+ L+P +S  Y LLSN+YA  G W+E   VRKLM +R +K   G S I++ + + +
Sbjct: 492 GKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVH 551

Query: 717 SFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAI 776
            F+ GD SHPQ   IY  L+++  RL+  GY+PD S VL DID+E KE  + QHSE+LAI
Sbjct: 552 KFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAI 611

Query: 777 AFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
            FGL+ T  G  ++IVKNLRVC DCH+  KLIS++  R+I+VRD  R+HHF+ G CSC D
Sbjct: 612 GFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKD 671

Query: 837 YW 838
           +W
Sbjct: 672 FW 673



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 183/439 (41%), Gaps = 79/439 (17%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYM-----RTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           +Q H   +++G  +D  ++ SLV  Y      R  + E   RVFD + + NV  W  ++ 
Sbjct: 52  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--- 209
               N    + + L++ M V   +PN +T+  VL   +D G+VA  VQVH  ++K+G   
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGG 171

Query: 210 ----------------------------GEVVTSVC-NALISMYLKSKMVRDARAVFDGM 240
                                       G  V +VC NA+I  YL+   V  AR +F+GM
Sbjct: 172 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 231

Query: 241 ED--------------------------------RDSITWNSMVAGYVTNELHMEAFETF 268
            D                                RD I+W++M+ GY+     MEA E F
Sbjct: 232 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 291

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + M        +    SV+  CA    L   R +H+   +N I  D  + T L+  Y+KC
Sbjct: 292 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC 351

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G+++ A ++F  M   K+V SW AMI G   +G  + A++ F +M    + PN  T+  +
Sbjct: 352 GRIDLAWEVFEKMSN-KEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGV 407

Query: 389 LTAQPAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EK 442
           L A       Q    I  +       E        +++   + G+L EA KV   I  E 
Sbjct: 408 LNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEP 467

Query: 443 DIVAWSAMLAGYAQIGDTE 461
               W A+L    + G+ E
Sbjct: 468 TPAVWGALLGACRKHGNVE 486



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 148/333 (44%), Gaps = 36/333 (10%)

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           ++   +++  + R   VE  R  FD+M E + +SW++++ GY +       LE+FH+MQ 
Sbjct: 237 ISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQK 296

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
           E I+P  F   +VL   A+ G +     +HT   +N  ++   +  +L+ MY K   +  
Sbjct: 297 EKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDL 356

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  VF+ M +++  +WN+M+ G   +    +A + F+ M +   E+   TFV V+  CA 
Sbjct: 357 AWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEI---TFVGVLNACAH 413

Query: 293 TKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
              ++    + + + K  G++        ++    + G + +A K+ S +        W 
Sbjct: 414 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 473

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK 411
           A++    ++G ++L         R G         I+L  +P  S            Y  
Sbjct: 474 ALLGACRKHGNVELG-------ERVG--------KILLELEPQNS----------GRY-- 506

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
                T L N Y K G  +E  +V +L+ E+ I
Sbjct: 507 -----TLLSNIYAKAGRWEEVGEVRKLMKERGI 534



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 3/179 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +  FD   +R+ + ++ ++  Y ++    EAL +F  +++  +      L SVL  C  L
Sbjct: 257 REFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANL 316

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR +H    ++    D  + TSLVD+Y +   ++    VF+ M+   V SW +++
Sbjct: 317 GALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMI 376

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            G A +   +  ++LF +M    I PN  TF  VL   A  G+V   + +   + K  G
Sbjct: 377 GGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 432


>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
 gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/443 (46%), Positives = 284/443 (64%), Gaps = 15/443 (3%)

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           EKS    TA++  Y K G++DEA  +F+ ++E+D + W+ M+ GYAQ G     + ++RQ
Sbjct: 3   EKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
           + +  V+PNE T  +V++AC   + A+E G+  H+      +   + V ++L+ MYSK G
Sbjct: 63  MLNAKVRPNEVTVLAVLSAC-GQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCG 121

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVIT 589
           ++E A  VF+R   +D+V+WNSM+ GYA HG ++ AL +FKEM     +   ITFIGV+ 
Sbjct: 122 SLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLN 181

Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
           AC+HAGLV EG ++F  M +E+ I P +EHY CMV+L  RAG LE+A +++  M      
Sbjct: 182 ACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDP 241

Query: 650 TVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
            +W T+L ACRL              +S    +S  YVLLSN+YAA G+W+  ARVR LM
Sbjct: 242 VLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLM 301

Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
            +   +KE G S IEV NK + FLAGD+ HP+S +IY  LEE++  LK  GY P T  VL
Sbjct: 302 KESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVL 361

Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
            D++D  KE  L  HSE+LA+AFGL+ T  G  ++IVKNLRVC DCH V KLISK+  R 
Sbjct: 362 HDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRK 421

Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
           +V+RD NRFHHF  GLCSCGDYW
Sbjct: 422 VVMRDRNRFHHFVNGLCSCGDYW 444



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 141/272 (51%), Gaps = 14/272 (5%)

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T ++  Y+K G +++A  +F  + E +D + W  MI G+ Q+G  +  +  F QM    V
Sbjct: 10  TAMITCYAKYGMIDEARVLFDGLEE-RDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68

Query: 379 RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           RPN  T   +L+A       +    VH++I       +  VGT+L++ Y K G L++A  
Sbjct: 69  RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARL 128

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VFE I  KD+VAW++M+ GYA  G ++ A+++++++   G +P + TF  V+NAC+    
Sbjct: 129 VFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGL 188

Query: 495 AVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSW 549
             E  K F++      I+ K+ +  C    +V +  + G +E A E+ K     +D V W
Sbjct: 189 VSEGWKFFYSMKDEYGIEPKVEHYGC----MVNLLGRAGYLEEAYELVKNMEIDQDPVLW 244

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
            +++     HG+     ++ + +  Q+L   G
Sbjct: 245 GTLLGACRLHGNIALGEQIAEYLVSQNLANSG 276



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 139/309 (44%), Gaps = 24/309 (7%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           T+++  Y +   +++ R +FD + E + + W  ++ GYA++ + +  L LF +M    ++
Sbjct: 10  TAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVR 69

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           PN  T   VL      G + T   VH+ +  NG  +   V  +LI MY K   + DAR V
Sbjct: 70  PNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLV 129

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           F+ + ++D + WNSMV GY  +    +A   F  M + G + T  TF+ V+  C+     
Sbjct: 130 FERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACS----- 184

Query: 297 RLARQLHSQVLKNGIDFDHNIRT-----------GLMV-AYSKCGKMEDASKIFSMMREM 344
                 H+ ++  G  F ++++            G MV    + G +E+A ++   M   
Sbjct: 185 ------HAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEID 238

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHI 404
           +D V W  ++     +G I L       +  + +  +G TY ++     A   ++  A +
Sbjct: 239 QDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSG-TYVLLSNIYAAAGNWEGVARV 297

Query: 405 IKTNYEKSF 413
                E  F
Sbjct: 298 RTLMKESGF 306



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 111/222 (50%), Gaps = 2/222 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFD   +R+ + +N ++  Y +  L  E L LF  +    +     T+ +VL  CG    
Sbjct: 28  LFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGA 87

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              GR VH     +G   +V V TSL+D+Y +  ++ED R VF+ ++  +VV+W S++ G
Sbjct: 88  LETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVG 147

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGGEV 212
           YA +  +   L LF  M + G +P   TF  VL   +  G+V+   +  ++M  + G E 
Sbjct: 148 YAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEP 207

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
                  ++++  ++  + +A  +   ME D+D + W +++ 
Sbjct: 208 KVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLG 249


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/668 (34%), Positives = 363/668 (54%), Gaps = 23/668 (3%)

Query: 98  RQVHCECVKSGFA-RDVNV-STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           + VH   +KS F  +D+ V       +Y + +       VFD+M + NV SWT ++ G  
Sbjct: 84  KAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGST 143

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            + +     + F  M   GI P+ F +S ++        +     VH  ++  G      
Sbjct: 144 EHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIF 203

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           V  +L++MY K   + D+  VF+ M + + ++WN+M++G  +N LH+EAF+ F  M    
Sbjct: 204 VSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGA 263

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 T VSV K      ++ + +++ +   + GI+ +  + T L+  YSKCG + DA 
Sbjct: 264 CTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDAR 323

Query: 336 KIFSMMREMKDV-VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
            +F        V   W AMISG+ Q+G    A+  + QM + G+  + +TY  +  A  A
Sbjct: 324 SVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAA 383

Query: 395 VSPFQ----VHAHIIKTNYE-KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
               Q    VH  ++K   +    SV  A+ +AY K G L++  KVF+ ++E+DIV+W+ 
Sbjct: 384 SKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTT 443

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++  Y+Q    E A+  +  +  EG  PN+FTFSSV+ +C A    +E G+Q H    KA
Sbjct: 444 LVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC-ASLCFLEYGRQVHGLLCKA 502

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L+   C+ SAL+ MY+K G+I  A +VF +    D+VSW ++I GYAQHG  + AL++F
Sbjct: 503 GLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLF 562

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
           + M    ++ + +T + V+ AC+H G+V+EG  YF  M + + + P MEHY+C++DL  R
Sbjct: 563 RRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGR 622

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
            G L+ AM+ I +MP   +  VW+T+L  CR              ++S++P  SA YVLL
Sbjct: 623 VGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLL 682

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN Y  TG +++   +R +M D+ VKKE GYSWI VK + + F +GD  HPQ  +IY KL
Sbjct: 683 SNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKL 742

Query: 736 EELSTRLK 743
           EEL  ++K
Sbjct: 743 EELREKIK 750



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 165/546 (30%), Positives = 276/546 (50%), Gaps = 25/546 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +FD  PQRN   +  ++       L  +    F  +   G+       S+++++C  L  
Sbjct: 123 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 182

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+ VH + V  GFA  + VSTSL+++Y +  ++ED   VF+ M E N VSW +++SG
Sbjct: 183 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 242

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTV---LGVLADEGIVATAVQVHTMVIKNGG 210
              N ++    +LF RM+     PN +T  +V   +G L D   V    +V     + G 
Sbjct: 243 CTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVD---VNMGKEVQNCASELGI 299

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETF 268
           E    V  ALI MY K   + DAR+VFD   +    +  WN+M++GY  +    EA E +
Sbjct: 300 EGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELY 359

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-DHNIRTGLMVAYSK 327
             M   G      T+ SV    A +K L+  R +H  VLK G+D    ++   +  AYSK
Sbjct: 360 VQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSK 419

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG +ED  K+F  M E +D+VSWT +++ + Q+   + A+  FC M  EG  PN FT+S 
Sbjct: 420 CGFLEDVRKVFDRMEE-RDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSS 478

Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
           +L +  ++       QVH  + K   +    + +AL++ Y K G + EA KVF+ I   D
Sbjct: 479 VLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPD 538

Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
           IV+W+A+++GYAQ G  E A++++R++   G+K N  T   V+ AC+     VE+G  + 
Sbjct: 539 IVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSH-GGMVEEGLFYF 597

Query: 504 -----ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYA 557
                   +  ++ +  C+    + +  + G ++ A E  ++   + + + W +++ G  
Sbjct: 598 QQMEDGYGVVPEMEHYACI----IDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCR 653

Query: 558 QHGHTK 563
            HG+ +
Sbjct: 654 VHGNVE 659



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 97/164 (59%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR  +R+ V +  L+  Y + SL +EAL  F  +R  G      T SSVL +C  L
Sbjct: 427 RKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASL 486

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
               +GRQVH    K+G   +  + ++L+D+Y +  ++ +  +VFD ++  ++VSWT+++
Sbjct: 487 CFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAII 546

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           SGYA++ + +  L+LF RM++ GIK N+ T   VL   +  G+V
Sbjct: 547 SGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMV 590


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/650 (34%), Positives = 363/650 (55%), Gaps = 23/650 (3%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           DV +    ++  +++  + D   +FD M   NVV+WTS++SGY RN   +  L +F  M 
Sbjct: 47  DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
             G+ PN F  +  L   AD G +    QVH++ ++ G      + + LI MY +   + 
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
            A+ VFD M+  D + + S+++ +  N     A E    M   G +    T  +++  C 
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNI--RTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
                 L +Q+H  ++K       ++   T L+  YS+ G+ + A  +F  +   K+VVS
Sbjct: 227 RV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL-HCKNVVS 281

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-PFQVHAHIIKTN 408
           W +M+  ++++G ++ A+  F  M  EGV PN F  SI+L A  ++    Q+H   IK +
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHD 341

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                 V  ALL+ Y + G+++E   +   I+  D+V+W+  ++   Q G  E A+ +  
Sbjct: 342 LITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLC 401

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
           Q+ SEG  PN + FSSV+++C A  A+++QG QFH  ++K   ++ +C  +AL+ MYSK 
Sbjct: 402 QMHSEGFTPNGYAFSSVLSSC-ADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKC 460

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
           G + SA   F      D+ SWNS+I G+AQHG   KALEVF +MR   ++ D  TF+GV+
Sbjct: 461 GQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 520

Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
             C H+G+V+EG+ +F +M++++   P   HY+CM+D+  R G  ++A+ +IN MPF   
Sbjct: 521 MGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 580

Query: 649 ATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
           A +W+T+LA+C              RL+ L   DSA YVL+SN+YA  G W++  +VR+ 
Sbjct: 581 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 640

Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           M++  VKK+AG SWIE+ N+ ++F + D+SHP S+ IY  L EL   ++D
Sbjct: 641 MDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 263/534 (49%), Gaps = 17/534 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LFDR P++N V +  ++  Y R+   + AL +F  +   G+       ++ L  C  L  
Sbjct: 70  LFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGA 129

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G QVH   V++GFA D  + + L+++Y R  ++   + VFD M+  +VV +TSL+S 
Sbjct: 130 LRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISA 189

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + RN   +   E   +M  +G+KPN  T +T+L             Q+H  +IK  G   
Sbjct: 190 FCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPR----VLGQQIHGYLIKKIGLRS 245

Query: 214 TSV--CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            SV    ALI  Y ++   + A+AVFD +  ++ ++W SM+  Y+ +    EA + F +M
Sbjct: 246 QSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDM 305

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G +        V+  C +   + L RQLH   +K+ +  D  +   L+  Y + G +
Sbjct: 306 ISEGVDPNEFALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLV 362

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E+   + + + E  D+VSWT  IS + QNG  + A+   CQM  EG  PNG+ +S +L++
Sbjct: 363 EELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSS 421

Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              V+      Q H   +K   +     G AL+N Y K G +  A   F+++   D+ +W
Sbjct: 422 CADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSW 481

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++++ G+AQ GD   A++++ ++ S G+KP++ TF  V+  C   S  VE+G+ F    I
Sbjct: 482 NSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNH-SGMVEEGELFFRLMI 540

Query: 508 -KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
            +     A    + ++ M  + G  + A  +      + D + W +++     H
Sbjct: 541 DQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH 594



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 217/489 (44%), Gaps = 54/489 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR    + V Y  L+  +CR+   + A    + + + GL     T++++L  C   
Sbjct: 169 KEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC--- 225

Query: 92  FDHVFGRQVHCECVKSGFARDVNV--STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
              V G+Q+H   +K    R  +V  ST+L+D Y R    +  + VFD ++  NVVSW S
Sbjct: 226 -PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCS 284

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++  Y R+   +  L++F  M  EG+ PN F  S VLG     G +    Q+H   IK+ 
Sbjct: 285 MMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHD 341

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V NAL+SMY ++ +V +  A+ + +E+ D ++W + ++    N    +A     
Sbjct: 342 LITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLC 401

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M   G       F SV+  CA    L    Q H   LK G D +      L+  YSKCG
Sbjct: 402 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 461

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
           +M  A   F +M    DV SW ++I GH Q+G  + A+  F +M   G++P+  T+  +L
Sbjct: 462 QMGSARLAFDVM-HTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVL 520

Query: 390 TA---QPAVSPFQVHAHIIKTNYEKSFSVGTA----LLNAYVKKGILDEAAKVF-ELIDE 441
                   V   ++   ++   Y  SF+   +    +++   + G  DEA ++  ++  E
Sbjct: 521 MGCNHSGMVEEGELFFRLMIDQY--SFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578

Query: 442 KDIVAWSAMLAG----------------------------------YAQIGDTEGAVKIY 467
            D + W  +LA                                   YA  G+ E A K+ 
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638

Query: 468 RQLTSEGVK 476
           R++   GVK
Sbjct: 639 RRMDETGVK 647



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 8/270 (2%)

Query: 26  FYSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYS+  +     ++FD    +N V +  ++  Y RD   +EAL +F  +   G+      
Sbjct: 257 FYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFA 316

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           LS VL  CG +     GRQ+HC  +K     D+ VS +L+ +Y RT  VE+   + + + 
Sbjct: 317 LSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE 373

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
             ++VSWT+ +S   +N   ++ + L  +M  EG  PN + FS+VL   AD   +   +Q
Sbjct: 374 NPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ 433

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
            H + +K G +      NALI+MY K   +  AR  FD M   D  +WNS++ G+  +  
Sbjct: 434 FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGD 493

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
             +A E F+ M   G +   STF+ V+  C
Sbjct: 494 ANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523


>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
 gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/708 (34%), Positives = 389/708 (54%), Gaps = 70/708 (9%)

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKN 208
           LLS + RN   D    LF++M   G+      ++ ++G  ADEG +  A+++ + M +K 
Sbjct: 56  LLSFHLRNGRIDEARSLFNKMSSPGVN----LYTMMIGGYADEGRLEDALKLFYEMPVK- 110

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
             ++++   N+++   LK   +  A  +FD M +R+ ++W +++ G +            
Sbjct: 111 --DLIS--WNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLL------------ 154

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
                   E  R      +     TK++     +      NG                  
Sbjct: 155 --------EFGRVEVAECLFRVMPTKDVTAWNSMVHGFFSNG------------------ 188

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
            ++EDA ++F  M   ++V+SWT++I G   NG    A+  F +M     +    T +  
Sbjct: 189 -RVEDAIELFEKMPN-RNVISWTSVIGGLDHNGRSFEALVVFHKMLAS-FKATSSTLACA 245

Query: 389 LTAQPAV-SPF---QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           LTA   + +PF   Q+H  I+KT Y  +  +  +L++ Y    ++D A+ +F     +++
Sbjct: 246 LTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNV 305

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
           V W+A+L GY        A+++++ +    V PN+ + +S +N+C    A V++G++ HA
Sbjct: 306 VVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEA-VDRGREVHA 364

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKK 564
            + K  L + + VS++LV MY+K G+I     VF R  ++++VSWNS+I G AQHG  + 
Sbjct: 365 VAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRW 424

Query: 565 ALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMV 624
           AL +F +M R  ++ D IT  G+++AC H+G++ +G+ +F        I  T EHYS MV
Sbjct: 425 ALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMV 484

Query: 625 DLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLISLQPHDSA 670
           DL  R G LE+A  +I+ MP  A+  VW  +L              AA  ++ LQP+ SA
Sbjct: 485 DLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSA 544

Query: 671 IYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQ 730
            Y LLSN+YA+TG W E +++RK M D  + K+ G SWI +K   ++F++GD SHP S +
Sbjct: 545 AYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRK 604

Query: 731 IYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
           IY KLE L  +LK+ GY PD  +   D++ E KE +LS HSERLAI FGL++T  G+ + 
Sbjct: 605 IYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTII 664

Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++KNLR+CGDCH  +KL SK+  R+IVVRD +RFHHF  G CSCGDYW
Sbjct: 665 VMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDYW 712



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 216/472 (45%), Gaps = 42/472 (8%)

Query: 18  PPKSLRSPFYSKKDQ-----SLFDR--SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR 70
           PP +    F+ +  +     SLF++  SP  N   Y  ++  Y  +   ++AL LF  + 
Sbjct: 51  PPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNL--YTMMIGGYADEGRLEDALKLFYEMP 108

Query: 71  RLGLPLFGSTLSSVLK----TCGC-LFDHV-----------------FGRQVHCECV-KS 107
              L  + S L   LK    T  C +FD +                 FGR    EC+ + 
Sbjct: 109 VKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRV 168

Query: 108 GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELF 167
              +DV    S+V  +     VED   +F+ M   NV+SWTS++ G   N  +   L +F
Sbjct: 169 MPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVF 228

Query: 168 HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
           H+M +   K  S T +  L   A+       VQ+H +++K G      +  +LIS Y   
Sbjct: 229 HKM-LASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANC 287

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVI 287
           K++ +A ++F+    R+ + W +++ GY  N  H +A + F  M        +S+  S +
Sbjct: 288 KLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSAL 347

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
             C   + +   R++H+   K G++ D  +   L+V Y+KCG + D   +F+ M   K+V
Sbjct: 348 NSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSR-KNV 406

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
           VSW ++I G  Q+G    A+  F QM R  V P+  T + +L+A    S           
Sbjct: 407 VSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSA-CGHSGMLTKGRCFFK 465

Query: 408 NYEKSFSVG------TALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLA 452
           ++ K+F +       +++++   + G L+EA  +  ++  K + + W A+L+
Sbjct: 466 HFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLS 517



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 148/334 (44%), Gaps = 2/334 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF++ P RN + +  ++     +    EAL +F  +         STL+  L  C  +  
Sbjct: 196 LFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKMLA-SFKATSSTLACALTACANICT 254

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G Q+H   VK+G+  +  +S SL+  Y     +++   +F+D    NVV WT+LL+G
Sbjct: 255 PFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTG 314

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           Y  N  +   L++F  M    + PN  + ++ L        V    +VH +  K G E  
Sbjct: 315 YGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESD 374

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             V N+L+ MY K   + D  AVF  M  ++ ++WNS++ G   +     A   F  M  
Sbjct: 375 IFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIR 434

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKME 332
              +    T   ++  C  +  L   R       KN GI+  +   + ++    + G++E
Sbjct: 435 TRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLE 494

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +A  +  +M    + + W A++S  + +  + +A
Sbjct: 495 EAEALIHIMPGKANYMVWLALLSSSINHSNVHVA 528


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/661 (35%), Positives = 366/661 (55%), Gaps = 57/661 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL--TRSTFVSVIKLC 290
           AR VFD +   +  +WN ++    T+   +++   F  M L  +     + TF  +IK  
Sbjct: 192 ARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRM-LHDSPFGPNKFTFPVLIKAV 250

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR-EMKDVVS 349
           A  +   + + +H   +K     D  +   L+  Y+ CG ++ A  +F M+    KD+VS
Sbjct: 251 AERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVS 310

Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
           W +M++G +Q G  D A++ F +M  EGV PN  T   +++A           +V  +I 
Sbjct: 311 WNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYID 370

Query: 406 KTNYEKSFSVGTALLNAYVKKG----------------------ILDEAAK--------- 434
           +     + +V  A ++ +VK G                      I+D  AK         
Sbjct: 371 RNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARD 430

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR--QLTSEGVKPNEFTFSSVINACTAP 492
           +F+ +  KDI AW+ +++GY Q G  + A+ I+R  QLT  G +P++ T  S ++AC A 
Sbjct: 431 IFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC-AQ 489

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
             A++ G+  H    K ++     ++++L+ MYSK G++E A EVF     +D+  W++M
Sbjct: 490 LGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAM 549

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I G A HG  + A+E+F +M+   ++ + +TF  ++ AC+H+GLVDEG++ FD M   + 
Sbjct: 550 IAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYG 609

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------------- 659
           + P  +HYSCMVD+  RAG LE+A+  I  MP A SA+VW  +L AC             
Sbjct: 610 VVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKAC 669

Query: 660 -RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
            RL+ ++P +   YVLLSN+YA TG W+  + +R+ M D  +KKE G S IE+    + F
Sbjct: 670 SRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEF 729

Query: 719 LAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH-KEAILSQHSERLAIA 777
           + GD +HP S  IY+KL+E+  RL+  GY  +T  +LQ +++E  KE  L  HSE++AIA
Sbjct: 730 IVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIA 789

Query: 778 FGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           FGL+   +   ++IVKNLRVC DCHTV K++SK+  RDIV+RD  RFHHF  G CSC DY
Sbjct: 790 FGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDY 849

Query: 838 W 838
           W
Sbjct: 850 W 850



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 255/558 (45%), Gaps = 79/558 (14%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS---TLSS 83
           Y++K   +FD+ PQ N   +N L+      S   +++ +F  IR L    FG    T   
Sbjct: 191 YARK---VFDQIPQPNLYSWNILIRALATSSDPIQSVLVF--IRMLHDSPFGPNKFTFPV 245

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--DMNE 141
           ++K        + G+ VH   +K+ F  DV V  SL+  Y    +++    VF+  + N 
Sbjct: 246 LIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNN 305

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            ++VSW S+++G+ +    D+ L+LF RM+ EG+ PN+ T  +V+   A    +    +V
Sbjct: 306 KDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKV 365

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
              + +N   +  +VCNA I M++K   V  AR +FD ME RD ++W +++ GY     H
Sbjct: 366 CDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEH 425

Query: 262 MEAFETFNNMG----------LAGAE----------------LTRS-------TFVSVIK 288
             A + F++M           ++G E                LT+S       T +S + 
Sbjct: 426 GIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLS 485

Query: 289 LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVV 348
            CA    + +   +H  + K  I  + N+ T L+  YSK G +E A ++F  +   KDV 
Sbjct: 486 ACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGN-KDVF 544

Query: 349 SWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTN 408
            W+AMI+G   +G  + A+  F  M    V+PN  T++ +L A         H+ ++   
Sbjct: 545 VWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACS-------HSGLVDEG 597

Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
                            K + DE  +V+ ++ +     +S M+    + G  E A+K   
Sbjct: 598 -----------------KRLFDEMERVYGVVPKTK--HYSCMVDVLGRAGHLEEALKFIE 638

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT-MYSK 527
            +    + P+   + +++ AC      +E  ++  ACS   ++      +  L++ +Y+K
Sbjct: 639 GMP---LAPSASVWGALLGACCI-HGNLELAEK--ACSRLLEIEPGNHGAYVLLSNLYAK 692

Query: 528 KGNIESASEVFKRQRKRD 545
            G+ E  SE+  RQ+ RD
Sbjct: 693 TGDWEGVSEL--RQQMRD 708



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 200/416 (48%), Gaps = 49/416 (11%)

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA--YSKCGKMEDASKIFSMMR 342
           ++ + C + K+L+   Q+H+Q+L+     D    + L  A  +S    ++ A K+F  + 
Sbjct: 144 ALFQQCTSFKQLK---QIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIP 200

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPF--- 398
           +  ++ SW  +I     +     +V  F +M  +    PN FT+ +++ A      F   
Sbjct: 201 Q-PNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVG 259

Query: 399 -QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID--EKDIVAWSAMLAGYA 455
             VH   IKT++     V  +L++ Y   G LD A  VFE+I+   KDIV+W++M+ G+ 
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFV 319

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q G  + A+ ++ ++ +EGV PN  T  SV++AC A +  +  G++      + ++   L
Sbjct: 320 QGGYPDKALDLFERMRNEGVHPNAVTMVSVMSAC-AKTMNLTLGRKVCDYIDRNEMMMNL 378

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVS--------------------------- 548
            V +A + M+ K G +E A  +F    KRD+VS                           
Sbjct: 379 NVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRK 438

Query: 549 ----WNSMICGYAQHGHTKKALEVFKEMR--RQDLEFDGITFIGVITACTHAGLVDEGQQ 602
               WN +I GY Q G  K+AL +F+E++  +     D +T +  ++AC   G +D G +
Sbjct: 439 DIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG-E 497

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           +    + +  I       + ++D+YS++G +EKA+++ + +       VW  ++A 
Sbjct: 498 WIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAG 552


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/595 (36%), Positives = 345/595 (57%), Gaps = 22/595 (3%)

Query: 263 EAFETFNNMGLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           EA E F  + L GA ++   T+ +++  C   K +R  +++ + ++ +G+D D  +R  +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           ++ + KCG M DA ++F  M E K+++SW  +I G +  G    A   F  M ++     
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPE-KNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAG 231

Query: 382 GFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
              +  ++ A   +       Q+H+  +KT       V  AL++ Y K G +++A  VF+
Sbjct: 232 SRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFD 291

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            + EK  V W++++AGYA  G +E A+ +Y ++   GVK + FTFS +I  C A  A++E
Sbjct: 292 QMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRIC-ARLASLE 350

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
             KQ HA  ++      +  ++ALV +YSK G IE A  VF     ++++SWN++I GY 
Sbjct: 351 HAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
            HG   +A+E+F+ M  + +  + +TF+ V++AC+++GL D G + F+ M  +H I P  
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LIS 663
            HY+CM++L  R G+L++A  +I   PF  +  +W  +L ACR              L  
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           + P   + YV+L N+Y  +G  +E A V + +  R ++     SWIE+K + Y F++GD 
Sbjct: 531 MGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
            H QS +IY KL+EL   +   GY P   ++L D+ DE +E +L  HSE+LAIAFGL+ T
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDV-DEQEERVLLYHSEKLAIAFGLINT 649

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
               PLQIV++ R+CGDCH+ IKLI+ + RR+IVVRD +RFHHFK+G CSCGDYW
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 206/444 (46%), Gaps = 36/444 (8%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           + SG   D  +   ++ ++++   + D RR+FD+M E N++SW +++ G           
Sbjct: 158 INSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAF 217

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
            LF  M  +     S  F T++   A  G++    Q+H+  +K G      V  ALI MY
Sbjct: 218 RLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMY 277

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
            K   + DA+ VFD M ++ ++ WNS++AGY  +    EA   +  M  +G ++   TF 
Sbjct: 278 SKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFS 337

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
            +I++CA    L  A+Q H+ ++++G   D    T L+  YSK G++EDA  +F MM   
Sbjct: 338 IIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPH- 396

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHI 404
           K+V+SW A+I+G+  +G    AV  F +M  EG+ PN  T+                   
Sbjct: 397 KNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTF------------------- 437

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM-LAGYAQIGDTEGA 463
                        A+L+A    G+ D   ++FE +     +   AM  A   ++   EG 
Sbjct: 438 ------------LAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGL 485

Query: 464 V-KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           + + +  +     KP    +++++ AC       E GK F A  +       L     L+
Sbjct: 486 LDEAFALIKDAPFKPTVNMWAALLTACRV-HKNFELGK-FAAEKLYGMGPEKLSNYVVLL 543

Query: 523 TMYSKKGNIESASEVFKRQRKRDL 546
            +Y++ G +E A+ V +  ++R L
Sbjct: 544 NIYNRSGRLEEAAAVIQTLKRRGL 567



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 192/420 (45%), Gaps = 45/420 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P++N + +N ++        + EA  LFL + +           ++++    L
Sbjct: 186 RRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGL 245

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQ+H   +K+G   DV V+ +L+D+Y +  ++ED + VFD M E   V W S++
Sbjct: 246 GLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSII 305

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYA +  ++  L +++ M+  G+K ++FTFS ++ + A    +  A Q H  ++++G  
Sbjct: 306 AGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFG 365

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +      AL+ +Y K   + DA+ VFD M  ++ I+WN+++AGY  +   +EA E F  M
Sbjct: 366 LDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERM 425

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G      TF++V+  C+ +       ++   + +     DH I+   M         
Sbjct: 426 LHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSR-----DHKIKPRAM--------- 471

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
                             +  MI    + G +D A   F  +     +P    ++ +LTA
Sbjct: 472 -----------------HYACMIELLGREGLLDEA---FALIKDAPFKPTVNMWAALLTA 511

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVG-------TALLNAYVKKGILDEAAKVFELIDEKDI 444
                 F++     K   EK + +G         LLN Y + G L+EAA V + +  + +
Sbjct: 512 CRVHKNFELG----KFAAEKLYGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGL 567


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/663 (35%), Positives = 356/663 (53%), Gaps = 83/663 (12%)

Query: 200 QVHTMVIKNGGEVVTSVCNALIS----MYLKSKMVRD---ARAVFDGMEDRDSITWNSMV 252
           Q+H+  IK G      +CN +I      +  S+   D   AR +FD + +    +WN M 
Sbjct: 32  QIHSRTIKTG-----IICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMF 86

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
            GY            +  M     +    T+  + K    +  L+L R+LH  V+K G+D
Sbjct: 87  KGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLD 146

Query: 313 ---FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
              F HN    L+  YS CG ++ A  IF M  +  DVV+W AMISG+            
Sbjct: 147 SNVFAHN---ALINMYSLCGLIDMARGIFDMSCK-SDVVTWNAMISGY------------ 190

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
                                                   +K     TA++  +V  G +
Sbjct: 191 -------------------------------------NRIKKDVISWTAIVTGFVNTGQV 213

Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           D A K F  + E+D V+W+AM+ GY ++   + A+ ++R++ +  +KP+EFT  SV+ AC
Sbjct: 214 DAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTAC 273

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW 549
            A   A+E G+       K K+ N   V +AL+ MY K GN+E A  +F    +RD  +W
Sbjct: 274 -AQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTW 332

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN 609
            +M+ G A +G  ++AL +F +M +  +  D +T++GV++ACTH G+VDEG+++F  M  
Sbjct: 333 TAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTA 392

Query: 610 EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------- 661
            H I P + HY CMVDL  +AG L++A +II  MP   ++ VW  +L ACR+        
Sbjct: 393 RHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAE 452

Query: 662 ------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKT 715
                 + L+P++ A+YVL  N+YAA   W +   +R++M DR +KK  G S IE+    
Sbjct: 453 RAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIV 512

Query: 716 YSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLA 775
           + F+AGD SHPQ+ +IY KL ++++ LK AGY P+TS V  DI +E KE  + +HSE+LA
Sbjct: 513 HEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLA 572

Query: 776 IAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCG 835
           IAFGL+ +  G  ++IVKNLR+C DCH V KL+SK+  R+++VRD  RFHHF+ G CSC 
Sbjct: 573 IAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCK 632

Query: 836 DYW 838
           DYW
Sbjct: 633 DYW 635



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/470 (22%), Positives = 188/470 (40%), Gaps = 93/470 (19%)

Query: 75  PLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYM--RTNNVEDG 132
           P+  +   S+ +TC  ++ H+  +Q+H   +K+G   +  +   ++         ++   
Sbjct: 11  PVTENPPLSLFETCKSMY-HL--KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYA 67

Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
           R++FD + E +V SW  +  GY+R       + L+  M    +KP+ +T+  +       
Sbjct: 68  RQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRS 127

Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
             +    ++H  V+K G +      NALI+MY    ++  AR +FD     D +TWN+M+
Sbjct: 128 VALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMI 187

Query: 253 AGY-------------VTN-----------------------------------ELHMEA 264
           +GY             VT                                      + EA
Sbjct: 188 SGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEA 247

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F  M  +  +    T VSV+  CA    L L   + + + KN +  D  +   L+  
Sbjct: 248 LMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDM 307

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           Y KCG +E A  IF+ + + +D  +WTAM+ G   NG  + A+N F QM +  V P+  T
Sbjct: 308 YFKCGNVEMALSIFNTLPQ-RDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVT 366

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID---- 440
           Y                                 +L+A    G++DE  K F  +     
Sbjct: 367 Y-------------------------------VGVLSACTHTGMVDEGKKFFASMTARHG 395

Query: 441 -EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
            E +I  +  M+    + G  + A +I + +    +KPN   + +++ AC
Sbjct: 396 IEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMP---MKPNSIVWGALLGAC 442



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 104/222 (46%), Gaps = 2/222 (0%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDH 94
           F + P+R+ V +  ++  Y R + ++EAL LF  ++   +     T+ SVL  C  L   
Sbjct: 220 FHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGAL 279

Query: 95  VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
             G  +     K+    D  V  +L+D+Y +  NVE    +F+ + + +  +WT+++ G 
Sbjct: 280 ELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGL 339

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGGEVV 213
           A N   +  L +F +M    + P+  T+  VL      G+V    +   +M  ++G E  
Sbjct: 340 AINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPN 399

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAG 254
            +    ++ +  K+  +++A  +   M  + +SI W +++  
Sbjct: 400 IAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGA 441


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/742 (32%), Positives = 404/742 (54%), Gaps = 25/742 (3%)

Query: 47  NRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           N  +   C+   ++EAL  F   ++        ST +S++  C       + +++H   +
Sbjct: 127 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVL 186

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           KS +   + +   ++++Y +  +++D R+VFD M   NVVSWTS++SGY++N   +  + 
Sbjct: 187 KSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAII 246

Query: 166 LFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-GEVVTSVCNALISMY 224
           ++ +M   G  P+  TF +V+      G +    Q+H  VIK+  G  +TS  NALISMY
Sbjct: 247 MYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQ-NALISMY 305

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA-ELTRSTF 283
                +  A  VF  +  +D I+W +M+ GY+     +EA   F ++   G  +     F
Sbjct: 306 TNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIF 365

Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
            SV   C++  EL   +Q+H   +K G+  +      L   Y+K G +  A   F  ++ 
Sbjct: 366 GSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKN 425

Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY-SIILTAQPAV---SPFQ 399
             D+VSW A+I+    NG  + A++FF QM   G+ P+  TY S++ T    V      Q
Sbjct: 426 -PDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQ 484

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIG 458
           +H++I+K  ++K  +V  +LL  Y K   L +A  VF  I    ++V+W+A+L+   Q  
Sbjct: 485 IHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKK 544

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
                 ++Y+++   G KP+  T ++++  C A   ++  G Q H  SIK+ L   + V 
Sbjct: 545 QEGETFRLYKEMHFSGNKPDSITITTLLGTC-AELTSLGVGNQVHCYSIKSGLILDVSVC 603

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           + L+ MY+K G+++ A +VF   +  D+VSW+S+I GYAQ G   +AL +F+ M    ++
Sbjct: 604 NGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQ 663

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            + +T++G ++AC+H GLV+EG + +  M  EH I PT EH+SC+VDL +RAG L +A  
Sbjct: 664 PNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAET 723

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
            I +    A  T W+T+LAAC+              ++ L P +SA  V+L N++A+ G+
Sbjct: 724 FIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGN 783

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W+E A++RKLM    V+K  G SWIEVK+K + F + D SHPQ N IY+ LEEL +++ D
Sbjct: 784 WEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLD 843

Query: 745 AGYKPDTSYVLQDIDDEHKEAI 766
            GY P  S  +Q++  + K  I
Sbjct: 844 DGYDPCQSCYIQNMYLKKKNYI 865



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 160/327 (48%), Gaps = 2/327 (0%)

Query: 42  NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVH 101
           + V +N ++  +  +    EA++ F  +  +GL     T  S+L TCG       GRQ+H
Sbjct: 427 DIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIH 486

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSLLSGYARNKMN 160
              VK GF +++ V  SL+ +Y + +++ D   VF D++  +N+VSW ++LS   + K  
Sbjct: 487 SYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQE 546

Query: 161 DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNAL 220
                L+  M   G KP+S T +T+LG  A+   +    QVH   IK+G  +  SVCN L
Sbjct: 547 GETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGL 606

Query: 221 ISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           I MY K   ++ AR VFD  ++ D ++W+S++ GY    L  EA   F  M   G +   
Sbjct: 607 IDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNE 666

Query: 281 STFVSVIKLCATTKELRLARQLH-SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
            T++  +  C+    +    +L+ S   ++GI       + ++   ++ G + +A     
Sbjct: 667 VTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQ 726

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLA 366
                 D+ +W  +++    +  +D+A
Sbjct: 727 KSGLDADITAWKTLLAACKTHNNVDIA 753



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 123/264 (46%), Gaps = 20/264 (7%)

Query: 36  DRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV 95
           D S   N V +N +L    +     E   L+  +   G      T++++L TC  L    
Sbjct: 523 DISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLG 582

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            G QVHC  +KSG   DV+V   L+D+Y +  +++  R VFD     ++VSW+SL+ GYA
Sbjct: 583 VGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYA 642

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGGEVVT 214
           +  +    L LF  M   G++PN  T+   L   +  G+V    +++ +M  ++G     
Sbjct: 643 QCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTR 702

Query: 215 SVCNALISMYLKSKMVRDARAVFD--GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              + ++ +  ++  + +A       G+ D D   W +++A          A +T NN+ 
Sbjct: 703 EHFSCIVDLLARAGCLHEAETFIQKSGL-DADITAWKTLLA----------ACKTHNNVD 751

Query: 273 LA--GA----ELTRSTFVSVIKLC 290
           +A  GA    +L  S   +++ LC
Sbjct: 752 IAERGAGNILKLDPSNSAAMVMLC 775


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 256/813 (31%), Positives = 420/813 (51%), Gaps = 66/813 (8%)

Query: 83  SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDM 139
           S LK C  + D +  +  H    K G   DV+  T LV         E     + VF++ 
Sbjct: 36  SSLKNCKTI-DEL--KMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENG 92

Query: 140 NE-SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
                   + SL+ GYA + +    + LF RM   GI P+ +TF   L V A        
Sbjct: 93  ESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNG 152

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           +Q+H ++IK        V N+L+  Y +   +  AR VFD M +R+ ++W SM+ GY   
Sbjct: 153 IQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARR 212

Query: 259 ELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           E   +A + F  M      +  S T V VI  CA  ++L    +++  +  +GI+ +  +
Sbjct: 213 EFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLM 272

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            + L+  Y KC  ++ A ++F       ++    AM S +++ G    A+     M   G
Sbjct: 273 ISALVDMYMKCNAIDIAKRLFDEYGA-SNLDLCNAMASNYVRQGLTKEALGVLNLMMDSG 331

Query: 378 VRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLNAYVKKGILD 430
           +RP+  +   +L+A  + S  +        H ++++  +E   ++  AL++ Y+K    D
Sbjct: 332 IRPDRIS---MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 388

Query: 431 EAAKVFELIDEKDIVAWSAMLAGYAQIGDT------------------------------ 460
            A ++F+ +  K +V W++++AGY + G+                               
Sbjct: 389 TAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENM 448

Query: 461 -EGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
            E A++++  + S E V  +  T  S+ +AC     A++  K  +    K ++   + + 
Sbjct: 449 YEEAIEVFHYMQSQECVNVDGVTMMSIASAC-GHLGALDLAKWIYYYIEKNRIQLDVRLG 507

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           + LV M+S+ G+ ESA  +F     RD+ +W + I   A  G+ ++A+E+F EM  Q L+
Sbjct: 508 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLK 567

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            DG+ FIG +TAC H GLV +G++ F+ M   H + P   HY CMVDL  RAG+LE+A+ 
Sbjct: 568 PDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQ 627

Query: 639 IINRMPFAASATVWRTVLAACRLIS--------------LQPHDSAIYVLLSNMYAATGH 684
           +I  MP   +  +W ++LAACR+                L P  +  YVLLSN+YA+ G 
Sbjct: 628 LIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGR 687

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W + A+VR  M ++ ++K  G S I+++ KT+ F +GD SHP+  +I + L+ELS R  D
Sbjct: 688 WNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASD 747

Query: 745 AGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTV 804
            G+ PD S VL D+D++ K  +LS+HSE+LA+AFGL+++  G  ++IVKNLRVC  CH+ 
Sbjct: 748 LGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSF 807

Query: 805 IKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
            K  SK+  R+I++RD NRFH  ++G CSC D+
Sbjct: 808 AKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 261/559 (46%), Gaps = 41/559 (7%)

Query: 46  YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
           YN L+  Y    L +EA+ LF+ +   G+     T    L  C    D   G Q+H   +
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160

Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
           K  +A+D+ V  SLV  Y     ++  R+VFD+M+E NVVSWTS++ GYAR +     ++
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220

Query: 166 LFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
           LF RM + E + PNS T   V+   A    + T  +V+  +  +G EV   + +AL+ MY
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMY 280

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
           +K   +  A+ +FD     +    N+M + YV   L  EA    N M  +G    R + +
Sbjct: 281 MKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISML 340

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
           S I  C+  + +   +  H  VL+NG +   NI   L+  Y KC + + A +IF  M   
Sbjct: 341 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN- 399

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQM------------------------------- 373
           K VV+W ++++G+++NG +D A   F  M                               
Sbjct: 400 KTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYM 459

Query: 374 -TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
            ++E V  +G T   I +A   +        ++ +I K   +    +GT L++ + + G 
Sbjct: 460 QSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGD 519

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
            + A  +F  +  +D+ AW+A +   A  G+ E A++++ ++  +G+KP+   F   + A
Sbjct: 520 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTA 579

Query: 489 CTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDL 546
           C      V+QGK+ F++      ++        +V +  + G +E A ++ K    + + 
Sbjct: 580 C-CHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPND 638

Query: 547 VSWNSMICGYAQHGHTKKA 565
           V WNS++      G+ + A
Sbjct: 639 VIWNSLLAACRVQGNVEMA 657



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 217/472 (45%), Gaps = 42/472 (8%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           + +FD   +RN V +  ++  Y R    ++A++LF  + R    +  S T+  V+  C  
Sbjct: 188 RKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAK 247

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L D   G +V+     SG   +  + ++LVD+YM+ N ++  +R+FD+   SN+    ++
Sbjct: 248 LEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAM 307

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            S Y R  +    L + + M   GI+P+  +  + +   +    +      H  V++NG 
Sbjct: 308 ASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 367

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E   ++CNALI MY+K      A  +FD M ++  +TWNS+VAGY+ N     A+ETFN 
Sbjct: 368 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNT 427

Query: 271 M-------------GLAGAELTRS-------------------TFVSVIKLCATTKELRL 298
           M              L    +                      T +S+   C     L L
Sbjct: 428 MPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDL 487

Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
           A+ ++  + KN I  D  + T L+  +S+CG  E A  IF+ +   +DV +WTA I    
Sbjct: 488 AKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMA 546

Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT- 417
             G ++ A+  F +M  +G++P+G  +   LTA       Q    I  +  EK   V   
Sbjct: 547 MAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNS-MEKLHGVSPE 605

Query: 418 -----ALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGA 463
                 +++   + G+L+EA ++  ++  E + V W+++LA     G+ E A
Sbjct: 606 DVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMA 657



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 5/177 (2%)

Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
           TS+   PN+   +    +       +++ K FH    K  L++ +   + LV    + G 
Sbjct: 19  TSKPSLPNQSKRTKATPSSLKNCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGT 78

Query: 531 IES---ASEVFKR-QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIG 586
            ES   A EVF+  +       +NS+I GYA  G  K+A+ +F  M    +  D  TF  
Sbjct: 79  RESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPF 138

Query: 587 VITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
            ++ C  +     G Q   +++   +        S +V  Y+  G L+ A  + + M
Sbjct: 139 GLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNS-LVHFYAECGELDCARKVFDEM 194


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/604 (36%), Positives = 349/604 (57%), Gaps = 24/604 (3%)

Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGID 312
           AG+  + LH+        + +A     + T    +K C+    L + R + +  +K G+ 
Sbjct: 96  AGHPEDALHL----FVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLM 151

Query: 313 FDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQ 372
            D  + + L+  Y+ C  +  A  +F  + E   VV W A+I+ +++NG     V  F  
Sbjct: 152 ADRFVLSSLIHMYASCRDVAAAQLLFDAVEE-NGVVMWNAIITAYMKNGNWMEVVEMFKG 210

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF----SVGTALLNAYVKKGI 428
           M   GV  +  T   ++TA   +   ++   + +   EK      ++ TAL++ Y K G 
Sbjct: 211 MLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGE 270

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
           L +A ++F+ +  +D+VAWSAM++GY Q      A+ ++ ++    V+PN+ T  SV++A
Sbjct: 271 LGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSA 330

Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
           C A   A+E GK  H+   + +L+  + + +ALV  Y+K G I+ A E F+    ++  +
Sbjct: 331 C-AVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWT 389

Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMV 608
           W ++I G A +G  ++ALE+F  MR+  +E   +TFIGV+ AC+H+ LV+EG+++FD M 
Sbjct: 390 WTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMT 449

Query: 609 NEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------- 659
            ++ I P  EHY C+VDL  RAG++++A   I  MP   +A +WR +L++C         
Sbjct: 450 QDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIG 509

Query: 660 -----RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNK 714
                +++SL P  S  Y+LLSN+YA+ G W+  A +RK M DR ++K  G S IE+   
Sbjct: 510 EEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGV 569

Query: 715 TYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERL 774
              F A D  HPQ  +IY K+EE+  R+K AGY P+T+ V  ++D+  KE  +S HSE+L
Sbjct: 570 VVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEKL 629

Query: 775 AIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
           AIAFGL+    GA +++ KNLRVC DCH+  KLISK+  R+IVVRD NRFHHFK+G CSC
Sbjct: 630 AIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRNRFHHFKDGTCSC 689

Query: 835 GDYW 838
            DYW
Sbjct: 690 NDYW 693



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 204/420 (48%), Gaps = 17/420 (4%)

Query: 164 LELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALIS 222
           L LF  M  V  + P+  T +  L   +    +     +    +K G      V ++LI 
Sbjct: 103 LHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIH 162

Query: 223 MYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
           MY   + V  A+ +FD +E+   + WN+++  Y+ N   ME  E F  M   G      T
Sbjct: 163 MYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEIT 222

Query: 283 FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
            VSV+  C    + +L + +   V + G+  + N+ T L+  Y+KCG++  A ++F  M+
Sbjct: 223 LVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQ 282

Query: 343 EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
             +DVV+W+AMISG+ Q      A+  F +M    V PN  T   +L+A   +   +   
Sbjct: 283 S-RDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGK 341

Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
            VH++I +     +  +GTAL++ Y K G +D+A + FE +  K+   W+A++ G A  G
Sbjct: 342 WVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 401

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACS----IKAKLNN 513
               A++++  +    ++P + TF  V+ AC+  S  VE+G++ F + +    IK +  +
Sbjct: 402 RGREALELFSSMRKASIEPTDVTFIGVLMACSH-SCLVEEGRRHFDSMTQDYGIKPRAEH 460

Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             CV    V +  + G I+ A +  +    + + V W +++   A H + +   E  K++
Sbjct: 461 YGCV----VDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQI 516



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 211/461 (45%), Gaps = 16/461 (3%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVE--YNRLLFEYCRDSLHQEALNLFLGIRRLG-LPLFGST 80
           SP       SLF   P+       YN L+         ++AL+LF+ +  +  +     T
Sbjct: 62  SPTLLPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHT 121

Query: 81  LSSVLKTCG--CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           ++  LK+C   C  D   GR +    VK G   D  V +SL+ +Y    +V   + +FD 
Sbjct: 122 VACALKSCSRMCTLD--VGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDA 179

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           + E+ VV W ++++ Y +N     V+E+F  M   G+  +  T  +V+      G     
Sbjct: 180 VEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLG 239

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             V   V + G     ++  ALI MY K   +  AR +FDGM+ RD + W++M++GY   
Sbjct: 240 KWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQA 299

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
           +   EA   F+ M LA  E    T VSV+  CA    L   + +HS + +  +     + 
Sbjct: 300 DQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILG 359

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y+KCG ++DA + F  M  +K+  +WTA+I G   NG    A+  F  M +  +
Sbjct: 360 TALVDFYAKCGCIDDAVEAFESM-PVKNSWTWTALIKGMATNGRGREALELFSSMRKASI 418

Query: 379 RPNGFTYSIILTA---QPAVSPFQVHAHIIKTNY---EKSFSVGTALLNAYVKKGILDEA 432
            P   T+  +L A      V   + H   +  +Y    ++   G  +++   + G++DEA
Sbjct: 419 EPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYG-CVVDLLGRAGLIDEA 477

Query: 433 AKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            +    +  E + V W A+L+  A   + E   +  +Q+ S
Sbjct: 478 YQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVS 518


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/595 (36%), Positives = 344/595 (57%), Gaps = 22/595 (3%)

Query: 263 EAFETFNNMGLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           EA E F  + L GA ++   T+ +++  C   K +R  +++ + ++ +G+D D  +R  +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           ++ + KCG M DA ++F  M E K+++SW  +I G +  G    A   F  M +      
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPE-KNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAG 231

Query: 382 GFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
              +  ++ A   +       Q+H+  +KT       V  AL++ Y K G +++A  VF+
Sbjct: 232 SRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFD 291

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
            + EK  V W++++AGYA  G +E A+ +Y ++   GVK + FTFS +I  C A  A++E
Sbjct: 292 QMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRIC-ARLASLE 350

Query: 498 QGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYA 557
             KQ HA  ++      +  ++ALV +YSK G IE A  VF     ++++SWN++I GY 
Sbjct: 351 HAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYG 410

Query: 558 QHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
            HG   +A+E+F+ M  + +  + +TF+ V++AC+++GL D G + F+ M  +H I P  
Sbjct: 411 NHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRA 470

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LIS 663
            HY+CM++L  R G+L++A  +I   PF  +  +W  +L ACR              L  
Sbjct: 471 MHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYG 530

Query: 664 LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDI 723
           + P   + YV+L N+Y  +G  +E A V + +  R ++     SWIE+K + Y F++GD 
Sbjct: 531 MGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDK 590

Query: 724 SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT 783
            H QS +IY KL+EL   +   GY P   ++L D+ DE +E +L  HSE+LAIAFGL+ T
Sbjct: 591 CHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDV-DEQEERVLLYHSEKLAIAFGLINT 649

Query: 784 PAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
               PLQIV++ R+CGDCH+ IKLI+ + RR+IVVRD +RFHHFK+G CSCGDYW
Sbjct: 650 SDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 204/444 (45%), Gaps = 36/444 (8%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           + SG   D  +   ++ ++++   + D RR+FD+M E N++SW +++ G           
Sbjct: 158 INSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAF 217

Query: 165 ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
            LF  M        S  F T++   A  G++    Q+H+  +K G      V  ALI MY
Sbjct: 218 RLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMY 277

Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
            K   + DA+ VFD M ++ ++ WNS++AGY  +    EA   +  M  +G ++   TF 
Sbjct: 278 SKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFS 337

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
            +I++CA    L  A+Q H+ ++++G   D    T L+  YSK G++EDA  +F MM   
Sbjct: 338 IIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPH- 396

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHI 404
           K+V+SW A+I+G+  +G    AV  F +M  EG+ PN  T+                   
Sbjct: 397 KNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTF------------------- 437

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM-LAGYAQIGDTEGA 463
                        A+L+A    G+ D   ++FE +     +   AM  A   ++   EG 
Sbjct: 438 ------------LAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGL 485

Query: 464 V-KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           + + +  +     KP    +++++ AC       E GK F A  +       L     L+
Sbjct: 486 LDEAFALIKDAPFKPTVNMWAALLTACRV-HKNFELGK-FAAEKLYGMGPEKLSNYVVLL 543

Query: 523 TMYSKKGNIESASEVFKRQRKRDL 546
            +Y+  G +E A+ V +  ++R L
Sbjct: 544 NIYNXSGRLEEAAAVIQTLKRRGL 567



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 191/420 (45%), Gaps = 45/420 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P++N + +N ++        + EA  LFL + +           ++++    L
Sbjct: 186 RRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGL 245

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GRQ+H   +K+G   DV V+ +L+D+Y +  ++ED + VFD M E   V W S++
Sbjct: 246 GLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSII 305

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +GYA +  ++  L +++ M+  G+K ++FTFS ++ + A    +  A Q H  ++++G  
Sbjct: 306 AGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFG 365

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
           +      AL+ +Y K   + DA+ VFD M  ++ I+WN+++AGY  +   +EA E F  M
Sbjct: 366 LDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERM 425

Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
              G      TF++V+  C+ +       ++   + +     DH I+   M         
Sbjct: 426 LHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSR-----DHKIKPRAM--------- 471

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
                             +  MI    + G +D A   F  +     +P    ++ +LTA
Sbjct: 472 -----------------HYACMIELLGREGLLDEA---FALIKDAPFKPTVNMWAALLTA 511

Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVG-------TALLNAYVKKGILDEAAKVFELIDEKDI 444
                 F++     K   EK + +G         LLN Y   G L+EAA V + +  + +
Sbjct: 512 CRVHKNFELG----KFAAEKLYGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGL 567


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/657 (36%), Positives = 360/657 (54%), Gaps = 77/657 (11%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVT 257
           Q+H   +K        V + L+++Y   K+  +  AR++FD ++ R  I WN+++  YV 
Sbjct: 34  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 93

Query: 258 NELHMEAFETFNNMGLAGAELTRS-TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           N+   +    F+   L    L  + T   VIK CA    ++  +Q+H   LK G   D  
Sbjct: 94  NQFSHDGIVLFHE--LVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 151

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           ++  L+  YSKCG+++ A K+F  M + KDVV W         N  ID            
Sbjct: 152 VQGSLVNMYSKCGEIDCARKVFDGMID-KDVVLW---------NSLID------------ 189

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
                                     +++  N         A++N Y+K G  D A ++F
Sbjct: 190 -------------------------GNLVSWN---------AMINGYMKSGDFDSALELF 215

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             +   D+V W+ M+AGY   G    AVK++  +   G +P+  T  SV++A +   A +
Sbjct: 216 YQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG-LAVL 274

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
            +G+  H+   K        + ++L+ MY+K G IESA  VF+  +K+ +  W ++I G 
Sbjct: 275 GKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGL 334

Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
             HG    AL +F EM +  L+ + I FIGV+ AC HAGLVD+G+QYFD+M+NE+ I PT
Sbjct: 335 GIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPT 394

Query: 617 MEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL--------------AACRLI 662
           +EHY C+VD+  RAG LE+A + I  MP + +  +W ++L              AA R+I
Sbjct: 395 LEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVI 454

Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGD 722
            + P     Y+LLSNMYAA+G W++ + VR++M  R  +K+ G S +E K   + F+ GD
Sbjct: 455 EVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGD 514

Query: 723 ISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDE-HKEAILSQHSERLAIAFGLV 781
           ISHPQ+ +IY+K+ E+  +LK  G+ PDT+ VL  I+ E  KEA L  HSERLAIAFGL+
Sbjct: 515 ISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLI 574

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
               G P++I+KNLRVC DCH+V KL+SK+  R+I+VRD  RFHHFK G CSC DYW
Sbjct: 575 NVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 183/406 (45%), Gaps = 52/406 (12%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYM--RTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
            Q+H   +K+       VS+ L+ LY   + N++   R +FD +   +++ W +++  Y 
Sbjct: 33  EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 92

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            N+ +   + LFH +  E + P++FT   V+   A  G+V    Q+H + +K G      
Sbjct: 93  ENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 151

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS------------------------- 250
           V  +L++MY K   +  AR VFDGM D+D + WNS                         
Sbjct: 152 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSA 211

Query: 251 -----------------MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
                            M+AGY  N   M+A + F  M   G+  + +T VSV+   +  
Sbjct: 212 LELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGL 271

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
             L   R +HS + KNG + D  + T L+  Y+KCG +E A  +F  +++ K V  WTA+
Sbjct: 272 AVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQK-KKVGHWTAI 330

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNY- 409
           I G   +G  + A+  F +M + G++PN   +  +L A      V   + +  ++   Y 
Sbjct: 331 IVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYK 390

Query: 410 -EKSFSVGTALLNAYVKKGILDEAAKVFE-LIDEKDIVAWSAMLAG 453
            E +      L++   + G L+EA    E +    + V W ++L G
Sbjct: 391 IEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGG 436



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 178/427 (41%), Gaps = 49/427 (11%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+FDR  +R+ + +N ++  Y  +    + + LF  +    LP    TL  V+K C  L
Sbjct: 70  RSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARL 128

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS-- 149
                G+Q+H   +K GF  DV V  SLV++Y +   ++  R+VFD M + +VV W S  
Sbjct: 129 GVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLI 188

Query: 150 ----------------------------------------LLSGYARNKMNDRVLELFHR 169
                                                   +++GY  N      +++F  
Sbjct: 189 DGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFM 248

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M   G +P+  T  +VL  ++   ++     +H+ + KNG E+   +  +LI MY K   
Sbjct: 249 MLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 308

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
           +  A  VF  ++ +    W +++ G   + +   A   F  M   G +     F+ V+  
Sbjct: 309 IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNA 368

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIR-TGLMV-AYSKCGKMEDASKIFSMMREMKDV 347
           C     +   RQ +  ++ N    +  +   G +V    + G +E+A      M    + 
Sbjct: 369 CNHAGLVDDGRQ-YFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNK 427

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP-FQVHAHIIK 406
           V W +++ G   +G ID+   +  Q   E V P      I+L+   A S  ++  +H+ +
Sbjct: 428 VIWMSLLGGSRNHGKIDIG-EYAAQRVIE-VAPETIGCYILLSNMYAASGMWEKVSHVRE 485

Query: 407 TNYEKSF 413
             Y++ F
Sbjct: 486 MMYKRGF 492



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS--KKGNIESASEVFKRQ 541
           S+   C+AP    ++ +Q HA S+K  + N   VSS L+ +YS  K  ++  A  +F R 
Sbjct: 21  SLFQTCSAP----QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI 76

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
           ++R L+ WN++I  Y ++  +   + +F E+  + L  D  T   VI  C   G+V EG+
Sbjct: 77  QRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARLGVVQEGK 135

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           Q   + +            S +V++YS+ G ++ A  + + M       +W +++
Sbjct: 136 QIHGLALKIGFGSDVFVQGS-LVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLI 188


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 235/658 (35%), Positives = 361/658 (54%), Gaps = 54/658 (8%)

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL-TRSTFVSVIKLCA 291
           A+ VF+ +   +   WN+++ GY ++    ++F  F +M  + +E   + TF  + K  +
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
             K L L   LH  V+K  +  D  I   L+  Y   G  + A ++F+ M   KDVVSW 
Sbjct: 185 RLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPG-KDVVSWN 243

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
           AMI+     G  D A+  F +M  + V+PN  T   +L+A       +    + ++I   
Sbjct: 244 AMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN 303

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
            + +   +  A+L+ YVK G +++A  +F  + EKDIV+W+ ML G+A++G+ + A  I+
Sbjct: 304 GFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIF 363

Query: 468 RQLT--------------------------------SEGVKPNEFTFSSVINACTAPSAA 495
             +                                 S+  KP+E T    + A +A   A
Sbjct: 364 DAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCA-SAQLGA 422

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           ++ G   H    K  +N    ++++L+ MY+K GN+  A EVF    ++D+  W++MI  
Sbjct: 423 IDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGA 482

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            A +G  K AL++F  M    ++ + +TF  ++ AC HAGLV+EG+Q F+ M   + I P
Sbjct: 483 LAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVP 542

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RL 661
            ++HY C+VD++ RAG+LEKA   I +MP   +A VW  +L AC               L
Sbjct: 543 QIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNL 602

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + L+P +   +VLLSN+YA  G W++ + +RKLM D  VKKE   S I+V    + FL G
Sbjct: 603 LELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVG 662

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ-DIDDEHKEAILSQHSERLAIAFGL 780
           D SHP S +IYSKL+E+S + K  GYKPD S +LQ   +D   E  L+ HSE+LAIAFGL
Sbjct: 663 DNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGL 722

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++T +  P++IVKN+R+CGDCH   KL+S+L  RDI++RD  RFHHF+ G CSC DYW
Sbjct: 723 ISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/493 (23%), Positives = 218/493 (44%), Gaps = 70/493 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI--------RRLGLPLFGSTLSS 83
           +++F++ PQ N   +N L+  Y   S   ++  +FL +         +   P F    +S
Sbjct: 126 KNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFP-FLFKAAS 184

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
            LK          G  +H   +K+  + D+ +  SL++ Y  +   +   RVF +M   +
Sbjct: 185 RLKVLH------LGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKD 238

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           VVSW ++++ +A   + D+ L LF  M+++ +KPN  T  +VL   A +  +     + +
Sbjct: 239 VVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICS 298

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT----NE 259
            +  NG      + NA++ MY+K   + DA+ +F+ M ++D ++W +M+ G+      +E
Sbjct: 299 YIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDE 358

Query: 260 LH-----------------MEAFET----------FNNMGLA-GAELTRSTFVSVIKLCA 291
            H                 + A+E           F+ M L+  A+    T +  +   A
Sbjct: 359 AHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASA 418

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
               +     +H  + K+ I+ + ++ T L+  Y+KCG +  A ++F  + E KDV  W+
Sbjct: 419 QLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAV-ERKDVYVWS 477

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK 411
           AMI      G    A++ F  M    ++PN  T++ IL A         HA ++    E+
Sbjct: 478 AMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACN-------HAGLVNEG-EQ 529

Query: 412 SFSVGTAL-------------LNAYVKKGILDEAAKVFELIDEKDIVA-WSAMLAGYAQI 457
            F     L             ++ + + G+L++AA   E +      A W A+L   ++ 
Sbjct: 530 LFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRH 589

Query: 458 GDTEGAVKIYRQL 470
           G+ E A   Y+ L
Sbjct: 590 GNVELAELAYQNL 602


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 233/663 (35%), Positives = 370/663 (55%), Gaps = 28/663 (4%)

Query: 101 HCECVKSGFARDVNVSTSLVDLYMRT--NNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
           H   +KSGFA     +  L+  Y R+  + +   RRVFD++   + VSW +LL+ +A + 
Sbjct: 14  HASLLKSGFAAPTPWN-QLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72

Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
            +     L   M  +G+  N+F   + L   A     A   Q+ ++ +K+G        +
Sbjct: 73  AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
           AL+ +Y K   VRDAR VFDGM +R++++WN+++AGY  +     A E F  M   G   
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVP 192

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
             +TF S++          L  QLH +++K G      +    + AYS+CG ++D+ +IF
Sbjct: 193 DEATFASLLT-AVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF 251

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTA--QPAV 395
             + +++D++SW AM+  +  NG  D A+ FF +M +E GV P+ ++++ I+++  +   
Sbjct: 252 DGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGH 311

Query: 396 SPFQ---VHAHIIKTNYEKSFSVGTALLNAYVKKG---ILDEAAKVFELIDEKDIVAWSA 449
              Q   +H  +IK+  E    V  AL+  Y +     ++++A K F  +  KD V+W++
Sbjct: 312 DDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNS 371

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ML GY+Q G +  A+K +R + SE V+ +E+ FS+ + + ++  A ++ GKQ H   I +
Sbjct: 372 MLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRS-SSELAVLQLGKQIHGLVIHS 430

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
              +   VSS+L+ MYSK G I+ A + F+   K   V WN+MI GYAQHG  +    +F
Sbjct: 431 GFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILF 490

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            EM ++    D ITF+G+IT+C+HAGLVDEG +  + M  ++ +   MEHY+C VDLY R
Sbjct: 491 NEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGR 550

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLL 675
           AG L+KA  +I+ MPF   A VW T+L ACR              L   +P   + YVLL
Sbjct: 551 AGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLL 610

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           S+MY+  G W +RA V+++M  R + K  G+S IEVKN+ +SF A D SHP+ ++IY  L
Sbjct: 611 SSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEVKNEVHSFNAEDKSHPKMDEIYEML 670

Query: 736 EEL 738
             L
Sbjct: 671 RVL 673



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/571 (28%), Positives = 283/571 (49%), Gaps = 21/571 (3%)

Query: 10  LINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI 69
           L+   ++  P  L +       + +FD  P+R+ V +N LL  +     H EA  L   +
Sbjct: 31  LLTAYSRSSPDGLAAA------RRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAM 84

Query: 70  RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
              GL      L S L++         G Q+    +KSG A +V  +++L+D+Y +   V
Sbjct: 85  HAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRV 144

Query: 130 EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL 189
            D R+VFD M E N VSW +L++GY  +      LELF  M+ EG+ P+  TF+++L   
Sbjct: 145 RDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLL--T 202

Query: 190 ADEGIVATAV-QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSIT 247
           A EG     + Q+H  ++K G  +  +V NA I+ Y +   ++D+R +FDG+ D RD I+
Sbjct: 203 AVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262

Query: 248 WNSMVAGYVTNELHMEAFETF-NNMGLAGAELTRSTFVSVIKLCAT-TKELRLARQLHSQ 305
           WN+M+  Y  N +  EA + F   M  +G      +F S+I  C+    +    R +H  
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGK---MEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           V+K+ ++    +   L+  Y++  +   MEDA K F+ +  +KD VSW +M++G+ Q+G 
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLV-LKDTVSWNSMLTGYSQHGL 381

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
              A+ FF  M  E VR + + +S  L +   ++      Q+H  +I + +  +  V ++
Sbjct: 382 SADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSS 441

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           L+  Y K GI+D+A K FE  D+   V W+AM+ GYAQ G  E    ++ ++       +
Sbjct: 442 LIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLD 501

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
             TF  +I +C+      E  +  +    K  +   +   +  V +Y + G ++ A ++ 
Sbjct: 502 HITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLI 561

Query: 539 KRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
                + D + W +++     HG+ + A +V
Sbjct: 562 DSMPFEPDAMVWMTLLGACRIHGNVELASDV 592



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 223/455 (49%), Gaps = 22/455 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           + +FD  P+RN V +N L+  Y        AL LFL + R GL    +T +S+L      
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGP 207

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSW 147
            C   H    Q+H + VK G A  + V  + +  Y +  +++D RR+FD + +  +++SW
Sbjct: 208 SCFLMH----QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISW 263

Query: 148 TSLLSGYARNKMNDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMV 205
            ++L  Y  N M+D  ++ F R MQ  G+ P+ ++F++++   ++ G      +V H +V
Sbjct: 264 NAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLV 323

Query: 206 IKNGGEVVTSVCNALISMYLKSK---MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           IK+  E VT VCNALI+MY +     M+ DA   F+ +  +D+++WNSM+ GY  + L  
Sbjct: 324 IKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSA 383

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +A + F  M           F + ++  +    L+L +Q+H  V+ +G   +  + + L+
Sbjct: 384 DALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLI 443

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YSK G ++DA K F    +    V W AMI G+ Q+G  +     F +M +     + 
Sbjct: 444 FMYSKSGIIDDARKSFEEA-DKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDH 502

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL------LNAYVKKGILDEAAKVF 436
            T+  ++T+          + I+ T  E  + V   +      ++ Y + G LD+A K+ 
Sbjct: 503 ITFVGLITSCSHAGLVDEGSEILNT-METKYGVPLRMEHYACGVDLYGRAGQLDKAKKLI 561

Query: 437 ELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           + +  E D + W  +L      G+ E A  +   L
Sbjct: 562 DSMPFEPDAMVWMTLLGACRIHGNVELASDVASHL 596


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/678 (35%), Positives = 380/678 (56%), Gaps = 26/678 (3%)

Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
           TFS +L    DE  ++    +   ++K+G  V  S  + L+   LK   +  AR +FDGM
Sbjct: 49  TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGM 107

Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
            +R  +TWNS++A Y+ +    EA E +  M          T  SV K  +     + A+
Sbjct: 108 PERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQ 167

Query: 301 QLHSQVLKNGIDFDHN-IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           + H   +  G++  +  + + L+  Y K GK  +A  +   + E KDVV  TA+I G+ Q
Sbjct: 168 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE-KDVVLITALIVGYSQ 226

Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSV 415
            G    AV  F  M  E V+PN +TY+ +L +   +        +H  ++K+ +E + + 
Sbjct: 227 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 286

Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
            T+LL  Y++  ++D++  VF+ I   + V W+++++G  Q G  E A+  +R++  + V
Sbjct: 287 QTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSV 346

Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
           KPN FT SS +  C+   A  E+G+Q H    K   +      S L+ +Y K G  + A 
Sbjct: 347 KPNSFTLSSALRGCSNL-AMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMAR 405

Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
            VF    + D++S N+MI  YAQ+G  ++ALE+F+ M    L+ + +T + V+ AC ++G
Sbjct: 406 LVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSG 465

Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
           LV+EG + FD    +  I  T +HY+CMVD+  RAG LE+A  +I  +       +WRT+
Sbjct: 466 LVEEGCELFD-SFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVT-NPDLVLWRTL 523

Query: 656 LAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
           L+AC+              ++ + P D    +LLSN+YA+TG W+    ++  M + K+K
Sbjct: 524 LSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLK 583

Query: 702 KEAGYSWIEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDD 760
           K    SW+E+  +T++F+AGD+ SHP S QI   LEEL  + KD GY  D S V QD+++
Sbjct: 584 KNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDMEE 643

Query: 761 EHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRD 820
             KE  L QHSE+LAIAF  V    G  ++I+KNLRVC DCH+ IK++S++ +R+I+ RD
Sbjct: 644 TAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRIIKREIICRD 702

Query: 821 TNRFHHFKEGLCSCGDYW 838
           + RFHHF++G CSCGDYW
Sbjct: 703 SKRFHHFRDGSCSCGDYW 720



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 253/487 (51%), Gaps = 12/487 (2%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +  + +KSGF  +++  + LVD  ++   +   R++FD M E ++V+W S+++ Y ++
Sbjct: 67  KNIQAQMLKSGFPVELS-GSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKH 125

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS-V 216
           + +   +E++  M    + P+ +T S+V    +D  +   A + H + +  G EV    V
Sbjct: 126 RRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFV 185

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            +AL+ MY+K    R+A+ V D +E++D +   +++ GY       EA + F +M +   
Sbjct: 186 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 245

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    T+ SV+  C   K++   + +H  ++K+G +     +T L+  Y +C  ++D+  
Sbjct: 246 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLL 305

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  ++   + V+WT++ISG +QNG  + A+  F +M R+ V+PN FT S  L     ++
Sbjct: 306 VFKCIK-YPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLA 364

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
            F    QVH  + K  +++    G+ L+  Y K G  D A  VF+ + E D+++ + M+ 
Sbjct: 365 MFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIY 424

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            YAQ G    A++++ ++ + G++PN+ T  SV+ AC   S  VE+G +      K K+ 
Sbjct: 425 SYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACN-NSGLVEEGCELFDSFRKDKIM 483

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
                 + +V M  + G +E A  +       DLV W +++     H    + +E+ + +
Sbjct: 484 LTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLSACKVH----RKVEMAERI 539

Query: 573 RRQDLEF 579
            R+ LE 
Sbjct: 540 TRKILEI 546



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 211/445 (47%), Gaps = 8/445 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGC 90
           + LFD  P+R+ V +N ++  Y +    +EA+ ++ L I    LP    TLSSV K    
Sbjct: 101 RQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLP-DEYTLSSVFKAFSD 159

Query: 91  LFDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
           L      ++ H   V  G    +V V ++LVD+Y++     + + V D + E +VV  T+
Sbjct: 160 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 219

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           L+ GY++   +   ++ F  M VE ++PN +T+++VL    +   +     +H +++K+G
Sbjct: 220 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 279

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
            E   +   +L++MYL+  +V D+  VF  ++  + +TW S+++G V N     A   F 
Sbjct: 280 FESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFR 339

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
            M     +    T  S ++ C+        RQ+H  V K G D D    +GL+  Y KCG
Sbjct: 340 KMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCG 399

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
             + A  +F  + E+ DV+S   MI  + QNG    A+  F +M   G++PN  T   +L
Sbjct: 400 CSDMARLVFDTLSEV-DVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVL 458

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVG----TALLNAYVKKGILDEAAKVFELIDEKDIV 445
            A       +    +  +  +    +       +++   + G L+EA  +   +   D+V
Sbjct: 459 LACNNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLV 518

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQL 470
            W  +L+        E A +I R++
Sbjct: 519 LWRTLLSACKVHRKVEMAERITRKI 543



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 1/329 (0%)

Query: 28  SKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           +++ + + DR  +++ V    L+  Y +     EA+  F  +    +     T +SVL +
Sbjct: 199 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 258

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           CG L D   G+ +H   VKSGF   +   TSL+ +Y+R + V+D   VF  +   N V+W
Sbjct: 259 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTW 318

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           TSL+SG  +N   +  L  F +M  + +KPNSFT S+ L   ++  +     QVH +V K
Sbjct: 319 TSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSK 378

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
            G +      + LI +Y K      AR VFD + + D I+ N+M+  Y  N    EA E 
Sbjct: 379 YGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALEL 438

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  M   G +    T +SV+  C  +  +    +L     K+ I   ++    ++    +
Sbjct: 439 FERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGR 498

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISG 356
            G++E+A  + + +    D+V W  ++S 
Sbjct: 499 AGRLEEAEMLITEVTN-PDLVLWRTLLSA 526


>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 613

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 217/534 (40%), Positives = 326/534 (61%), Gaps = 22/534 (4%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  +   G  + A ++F+ M  ++DVVSW  M+SG  ++GA++ A   F  M    VR 
Sbjct: 86  LLSCHFASGDADGARRLFASM-PVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMP---VR- 140

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV-GTALLNAYVKKGILDEAAKVFELI 439
           N  +++ +++               +   EK  +V  TA+++ Y+  G + +A + FE +
Sbjct: 141 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM 200

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQ 498
             +++V+W+A++AGY +    + A++++R +  E  V+PN  T SSV+  C+  SA +  
Sbjct: 201 PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA-LGF 259

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           GKQ H   +K  L+  L V ++LV+MY K G++ SA ++F     RD+V+WN+MI GYAQ
Sbjct: 260 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQ 319

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG  K+A+ +F+ M+ + +E + ITF+ V+TAC H GL D G + F+ M   + I P ++
Sbjct: 320 HGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVD 379

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISL 664
           HYSCMVDL  RAG LE+A+D+I  MPF    + + T+LAACR              LI  
Sbjct: 380 HYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEK 439

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P  +  YV L+N+YA    W + +RVR+ M D  V K  GYSWIE+K   + F + D  
Sbjct: 440 DPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRL 499

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           HPQ   I+ KL +L+ R+K  GY PD  +VL D+D+  K  +L +HSE+LAI+FGL++T 
Sbjct: 500 HPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLISTA 559

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G  L+I KNLRVCGDCH   K+ISK+E R+I++RDT RFHHF+ G CSCGDYW
Sbjct: 560 PGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 57/396 (14%)

Query: 102 CECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR--NKM 159
           C  + S  +   ++ST  V   +R  ++      F         ++  LL+GYAR   ++
Sbjct: 6   CPFLASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRL 65

Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNGGEVVTSVCN 218
            D    LF R+      P++ +++T+L      G    A ++  +M ++   +VV+   N
Sbjct: 66  AD-ARHLFDRIPT----PDAVSYNTLLSCHFASGDADGARRLFASMPVR---DVVSW--N 115

Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
            ++S   KS  V +A+AVF  M  R+S++WN+MV+G+  +     A E F N    G   
Sbjct: 116 TMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG--- 172

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
                                              D  + T ++  Y   G +  A + F
Sbjct: 173 -----------------------------------DAVLWTAMVSGYMDIGNVVKAIEYF 197

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSP 397
             M  ++++VSW A+++G+++N   D A+  F  M RE  V+PN  T S +L     +S 
Sbjct: 198 EAM-PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA 256

Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                Q+H   +K    ++ +VGT+L++ Y K G L  A K+F  +  +D+VAW+AM++G
Sbjct: 257 LGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISG 316

Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           YAQ GD + A+ ++ ++  EGV+PN  TF +V+ AC
Sbjct: 317 YAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC 352



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 48/378 (12%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +L+  +  + + +  RR+F  M   +VVSW +++SG +++   +    +F  M V     
Sbjct: 85  TLLSCHFASGDADGARRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR---- 140

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
           NS +++ ++   A    ++ A +      + G  V+ +   A++S Y+    V  A   F
Sbjct: 141 NSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWT---AMVSGYMDIGNVVKAIEYF 197

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKEL 296
           + M  R+ ++WN++VAGYV N    +A   F  M   A  +   ST  SV+  C+    L
Sbjct: 198 EAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSAL 257

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
              +Q+H   +K  +  +  + T L+  Y KCG +  A K+F  M   +DVV+W AMISG
Sbjct: 258 GFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM-HTRDVVAWNAMISG 316

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG 416
           + Q+G    A+N F +M  EGV PN  T+                               
Sbjct: 317 YAQHGDGKEAINLFERMKDEGVEPNWITF------------------------------- 345

Query: 417 TALLNAYVKKGILDEAAKVFELID-----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
            A+L A +  G+ D   + FE +      E  +  +S M+    + G  E AV + R + 
Sbjct: 346 VAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMP 405

Query: 472 SEGVKPNEFTFSSVINAC 489
            E   P+   + +++ AC
Sbjct: 406 FE---PHPSAYGTLLAAC 420



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 92/161 (57%), Gaps = 1/161 (0%)

Query: 35  FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGCLFD 93
           F+  P RN V +N ++  Y ++S   +AL LF   +R   +    STLSSVL  C  L  
Sbjct: 197 FEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSA 256

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
             FG+Q+H  C+K   +R++ V TSLV +Y +  ++    ++F +M+  +VV+W +++SG
Sbjct: 257 LGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISG 316

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGI 194
           YA++      + LF RM+ EG++PN  TF  VL      G+
Sbjct: 317 YAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGL 357



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 122/264 (46%), Gaps = 10/264 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           + LF   P R+ V +N ++    +    +EA  +FL      +P+  S + ++++    C
Sbjct: 100 RRLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLA-----MPVRNSVSWNAMVSGFAC 154

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
             D     +      + G   D  + T++V  YM   NV      F+ M   N+VSW ++
Sbjct: 155 SRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAV 211

Query: 151 LSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
           ++GY +N   D  L LF  M  E  ++PN+ T S+VL   ++   +    Q+H   +K  
Sbjct: 212 VAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLP 271

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                +V  +L+SMY K   +  A  +F  M  RD + WN+M++GY  +    EA   F 
Sbjct: 272 LSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFE 331

Query: 270 NMGLAGAELTRSTFVSVIKLCATT 293
            M   G E    TFV+V+  C  T
Sbjct: 332 RMKDEGVEPNWITFVAVLTACIHT 355



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/291 (20%), Positives = 120/291 (41%), Gaps = 67/291 (23%)

Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI---------------- 457
           S+ T  + A V++G L  A + F     K    ++ +LAGYA+                 
Sbjct: 18  SLSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT 77

Query: 458 ----------------GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
                           GD +GA +++  +    V     +++++++   + S AVE+ K 
Sbjct: 78  PDAVSYNTLLSCHFASGDADGARRLFASMPVRDV----VSWNTMVSG-LSKSGAVEEAKA 132

Query: 502 -FHACSIKAKLNNALCVS---------------------------SALVTMYSKKGNIES 533
            F A  ++  ++    VS                           +A+V+ Y   GN+  
Sbjct: 133 VFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVK 192

Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACT 592
           A E F+    R+LVSWN+++ GY ++ H   AL +F+ M R+ +++ +  T   V+  C+
Sbjct: 193 AIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCS 252

Query: 593 HAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
           +   +  G+Q     + +  +   +   + +V +Y + G L  A  +   M
Sbjct: 253 NLSALGFGKQIHQWCM-KLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM 302


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/662 (33%), Positives = 360/662 (54%), Gaps = 64/662 (9%)

Query: 200 QVHTMVIKNG--------GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSM 251
           Q H ++++ G        G +V S  N   + YL       +  VFD +   +   WN M
Sbjct: 52  QAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLS---FESSLRVFDFVRKPNVFLWNCM 108

Query: 252 VAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI 311
           +   + N    +A   +  M +A     + T+ +V+K C+    +    Q+H+ ++K+G+
Sbjct: 109 IKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGL 168

Query: 312 DFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFC 371
             D +I +  +  Y+  G++ +A +I        D V W AMI G+L+ G ++ A   F 
Sbjct: 169 GGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFE 228

Query: 372 QMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
            M    +                                   S   A+++ + + G+++ 
Sbjct: 229 GMPDRSM----------------------------------ISTWNAMISGFSRCGMVEV 254

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A + F+ + E+D ++WSAM+ GY Q G    A++I+ Q+  E ++P +F   SV++AC A
Sbjct: 255 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC-A 313

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNS 551
              A++QG+  H  + +  +     + ++LV MY+K G I+ A EVF++   +++ SWN+
Sbjct: 314 NLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNA 373

Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
           MI G A HG  + A+++F +M   D+  + ITF+GV+ AC H GLV +G   F+ M  E+
Sbjct: 374 MIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEY 430

Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR----------- 660
            + P +EHY C+VDL  RAG+L +A  +++ +P   +  VW  +L ACR           
Sbjct: 431 GVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERV 490

Query: 661 ---LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV-KNKTY 716
              L+ L+P +S  Y LLSN+YA  G W+E   VRKLM +R +K   G S I++ + + +
Sbjct: 491 GKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVH 550

Query: 717 SFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAI 776
            F+ GD SHPQ   IY  L+++  RL+  GY+PD S VL DID+E KE  + QHSE+LAI
Sbjct: 551 KFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAI 610

Query: 777 AFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
            FGL+ T  G  ++IVKNLRVC DCH+  KLIS++  R+I+VRD  R+HHF+ G CSC D
Sbjct: 611 GFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKD 670

Query: 837 YW 838
           +W
Sbjct: 671 FW 672



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 183/439 (41%), Gaps = 79/439 (17%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYM-----RTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           +Q H   +++G  +D  ++ SLV  Y      R  + E   RVFD + + NV  W  ++ 
Sbjct: 51  KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 110

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG--- 209
               N    + + L++ M V   +PN +T+  VL   +D G+VA  VQVH  ++K+G   
Sbjct: 111 VCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGG 170

Query: 210 ----------------------------GEVVTSVC-NALISMYLKSKMVRDARAVFDGM 240
                                       G  V +VC NA+I  YL+   V  AR +F+GM
Sbjct: 171 DGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM 230

Query: 241 ED--------------------------------RDSITWNSMVAGYVTNELHMEAFETF 268
            D                                RD I+W++M+ GY+     MEA E F
Sbjct: 231 PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIF 290

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + M        +    SV+  CA    L   R +H+   +N I  D  + T L+  Y+KC
Sbjct: 291 HQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC 350

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G+++ A ++F  M   K+V SW AMI G   +G  + A++ F +M    + PN  T+  +
Sbjct: 351 GRIDLAWEVFEKMSN-KEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGV 406

Query: 389 LTAQPAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EK 442
           L A       Q    I  +       E        +++   + G+L EA KV   I  E 
Sbjct: 407 LNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEP 466

Query: 443 DIVAWSAMLAGYAQIGDTE 461
               W A+L    + G+ E
Sbjct: 467 TPAVWGALLGACRKHGNVE 485



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 148/333 (44%), Gaps = 36/333 (10%)

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           ++   +++  + R   VE  R  FD+M E + +SW++++ GY +       LE+FH+MQ 
Sbjct: 236 ISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQK 295

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
           E I+P  F   +VL   A+ G +     +HT   +N  ++   +  +L+ MY K   +  
Sbjct: 296 EKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDL 355

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
           A  VF+ M +++  +WN+M+ G   +    +A + F+ M +   E+   TFV V+  CA 
Sbjct: 356 AWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDINPNEI---TFVGVLNACAH 412

Query: 293 TKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
              ++    + + + K  G++        ++    + G + +A K+ S +        W 
Sbjct: 413 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 472

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK 411
           A++    ++G ++L         R G         I+L  +P  S            Y  
Sbjct: 473 ALLGACRKHGNVELG-------ERVG--------KILLELEPQNS----------GRY-- 505

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
                T L N Y K G  +E  +V +L+ E+ I
Sbjct: 506 -----TLLSNIYAKAGRWEEVGEVRKLMKERGI 533



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 3/179 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +  FD   +R+ + ++ ++  Y ++    EAL +F  +++  +      L SVL  C  L
Sbjct: 256 REFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANL 315

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                GR +H    ++    D  + TSLVD+Y +   ++    VF+ M+   V SW +++
Sbjct: 316 GALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMI 375

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
            G A +   +  ++LF +M    I PN  TF  VL   A  G+V   + +   + K  G
Sbjct: 376 GGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 431



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 6/172 (3%)

Query: 490 TAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG-----NIESASEVFKRQRKR 544
           T  + ++   KQ HA  ++        ++ +LV  Y+        + ES+  VF   RK 
Sbjct: 41  TQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP 100

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           ++  WN MI    ++    KA+ ++ EM       +  T+  V+ AC+ AG+V EG Q  
Sbjct: 101 NVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVH 160

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
             +V +H +       S  + +Y+  G L +A  I++       A  W  ++
Sbjct: 161 AHLV-KHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMI 211


>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/371 (52%), Positives = 260/371 (70%), Gaps = 15/371 (4%)

Query: 482 FSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ 541
            + ++ AC A  AA+EQGKQ HA  IK      + VS+ LV MY K G IE A EVF + 
Sbjct: 1   MAGILRAC-ASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKL 59

Query: 542 RKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQ 601
            + D+ SWN+MI G AQHG  K+A+ +F++M +  ++ + ITF+ V++ C+HAGLVDEG+
Sbjct: 60  LEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGR 119

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
            YFD M  +H I P  EHYSCMVDL+ RAG L++A++ IN+MP   +A+VW ++L ACR 
Sbjct: 120 NYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRV 179

Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                        LI L P +   YVLLSN+YAA G W +  +VRK+M DR VKKE G S
Sbjct: 180 HGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCS 239

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
           WIEV+NK + F+ GD SHPQ  +IY  LE L+ ++K AGY P+T++VL D+++E KE IL
Sbjct: 240 WIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWIL 299

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
             HSE+LAIAFG+++TP G  +++VKNLRVCGDCHT  K IS++  R+IV+RDT+RFHHF
Sbjct: 300 GHHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHF 359

Query: 828 KEGLCSCGDYW 838
           K+G CSCGDYW
Sbjct: 360 KDGQCSCGDYW 370



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 26/220 (11%)

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
            +++ CA+   L   +Q+H+ ++K G + D ++  GL+  Y KCG++EDA ++FS + E 
Sbjct: 3   GILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLE- 61

Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHI 404
            DV SW AMISG  Q+G    AV  F QM + GV+PN  T+ ++L+          HA +
Sbjct: 62  PDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCS-------HAGL 114

Query: 405 IKT--NYEKSFSVG----------TALLNAYVKKGILDEAAK-VFELIDEKDIVAWSAML 451
           +    NY  S +            + +++ + + G LDEA   + ++  E +   W ++L
Sbjct: 115 VDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLL 174

Query: 452 AG---YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
                +  I   E AV+   +LT E   P  +   S I A
Sbjct: 175 GACRVHGNIELAERAVEQLIELTPE--NPGTYVLLSNIYA 212



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 48/270 (17%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           ++ +L+ C  +     G+QVH + +K GF  DV+VS  LVD+Y +   +ED + VF  + 
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           E +V SW +++SG A++      + LF +M   G+KPN  TF  VL   +  G       
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAG------- 113

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT-----WNSMVAGY 255
                                       +V + R  FD M     I+     ++ MV  +
Sbjct: 114 ----------------------------LVDEGRNYFDSMTRDHGISPKAEHYSCMVDLF 145

Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
                  EA    N M +   E   S + S++  C     + LA +   Q+++   +   
Sbjct: 146 GRAGCLDEALNFINQMPV---EPNASVWGSLLGACRVHGNIELAERAVEQLIELTPE--- 199

Query: 316 NIRTGLMVA--YSKCGKMEDASKIFSMMRE 343
           N  T ++++  Y+  G+ +DA K+  MM++
Sbjct: 200 NPGTYVLLSNIYAAAGRWDDAGKVRKMMKD 229



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 18/189 (9%)

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
           QVHA IIK  +E   SV   L++ Y K G +++A +VF  + E D+ +W+AM++G AQ G
Sbjct: 19  QVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHG 78

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF-------HACSIKAKL 511
             + AV ++ Q+   GVKPN+ TF  V++ C+  +  V++G+ +       H  S KA+ 
Sbjct: 79  CGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSH-AGLVDEGRNYFDSMTRDHGISPKAEH 137

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGH---TKKALE 567
                  S +V ++ + G ++ A     +       S W S++     HG+    ++A+E
Sbjct: 138 ------YSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVE 191

Query: 568 VFKEMRRQD 576
              E+  ++
Sbjct: 192 QLIELTPEN 200



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 37/248 (14%)

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
           QVH  +IK G E+  SV N L+ MY K   + DA+ VF  + + D  +WN+M++G   + 
Sbjct: 19  QVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHG 78

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
              EA   F  M   G +  + TFV V+  C+    +   R     + +     DH I  
Sbjct: 79  CGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTR-----DHGISP 133

Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
                     K E                 ++ M+    + G +D A+NF  QM    V 
Sbjct: 134 ----------KAE----------------HYSCMVDLFGRAGCLDEALNFINQMP---VE 164

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYE-KSFSVGTALL--NAYVKKGILDEAAKVF 436
           PN   +  +L A       ++    ++   E    + GT +L  N Y   G  D+A KV 
Sbjct: 165 PNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVR 224

Query: 437 ELIDEKDI 444
           +++ ++ +
Sbjct: 225 KMMKDRSV 232


>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 232/568 (40%), Positives = 340/568 (59%), Gaps = 29/568 (5%)

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGL-----MVAYSKCGKMEDASKIFSMMREMKDVVSW 350
           +R+ RQ+H+++L + +    +I  GL       A S  G ++ A K+FS ++   ++ SW
Sbjct: 1   MRVLRQIHARLLTHAMPIS-SISFGLCKIIGFCALSPYGDIDYARKLFSQIQR-PNIFSW 58

Query: 351 TAMISGHLQNGAIDL-AVNFFCQMTREGV-RPNGFTYSIILTAQPAVSPF----QVHAHI 404
            +MI G  Q+       V  F +M R G   PN FT + +L A   VS      QVHA++
Sbjct: 59  NSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANV 118

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           +K+ +  S  V TAL+N Y K   +  A+KVF+ I ++++VAWS M++GYA+IG    A+
Sbjct: 119 LKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEAL 178

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
            ++R +   GV P+E T  SVI+AC A S A++ GK  HA   K  +   L +S+ALV M
Sbjct: 179 GLFRDMQKAGVVPDEVTMVSVISACAA-SGALDTGKWVHAYINKQLIETDLELSTALVNM 237

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K G IE A EVF     +D  +W+SMI G A +G  + ALE F  M    ++ + +TF
Sbjct: 238 YAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTF 297

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           IGV++AC H+GLV EG++Y+  M+ E  I P+ME Y CMVDL  RA ++E A  ++  MP
Sbjct: 298 IGVLSACAHSGLVSEGRRYWSSML-EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMP 356

Query: 645 FAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERAR 690
            + +  +WRT+L  C              RL+ L+PH++  Y+LLSN+YA+   W++ ++
Sbjct: 357 ISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQ 416

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPD 750
           VRK M    +K   G S IEV    + F+ GD SHP++ ++   L ++S R+   G++P 
Sbjct: 417 VRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPG 476

Query: 751 TSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISK 810
            S VL ++ DE KE  L +HSERLAIA+GL+ T     ++IVKNLRVCGDCH V K+IS 
Sbjct: 477 ISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISA 536

Query: 811 LERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             RR+I+VRD  RFH F  G CSC D+W
Sbjct: 537 EYRREIIVRDRVRFHKFVNGSCSCRDFW 564



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 11/348 (3%)

Query: 24  SPF----YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSL--HQEALNLFLGIRRLGLPLF 77
           SP+    Y++K   LF +  + N   +N ++   C  S    +E + LF  + R G P  
Sbjct: 35  SPYGDIDYARK---LFSQIQRPNIFSWNSMI-RGCSQSQTPSKEPVILFRKMVRRGYPNP 90

Query: 78  GS-TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF 136
            + T++ VLK C  +     G+QVH   +KSGF     V T+LV+ Y +  ++    +VF
Sbjct: 91  NTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVF 150

Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
           D++ + N+V+W++++SGYAR  + +  L LF  MQ  G+ P+  T  +V+   A  G + 
Sbjct: 151 DEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALD 210

Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
           T   VH  + K   E    +  AL++MY K   +  A+ VFD M  +D+  W+SM+ G  
Sbjct: 211 TGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLA 270

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
            N L  +A E F  M  A  +    TF+ V+  CA +  +   R+  S +L+ GI     
Sbjct: 271 INGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSME 330

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
           +   ++    +   +EDA  +   M    + V W  ++ G  ++  +D
Sbjct: 331 LYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLD 378



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 141/266 (53%), Gaps = 3/266 (1%)

Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDR-VLELFHRMQVEGI-KPNSFTFSTV 185
           +++  R++F  +   N+ SW S++ G ++++   +  + LF +M   G   PN+FT + V
Sbjct: 39  DIDYARKLFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFV 98

Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
           L   +    +    QVH  V+K+G      V  AL++ Y K + +  A  VFD + DR+ 
Sbjct: 99  LKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNL 158

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           + W++M++GY    L  EA   F +M  AG      T VSVI  CA +  L   + +H+ 
Sbjct: 159 VAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAY 218

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           + K  I+ D  + T L+  Y+KCG +E A ++F  M  +KD  +W++MI G   NG  + 
Sbjct: 219 INKQLIETDLELSTALVNMYAKCGCIERAKEVFDAM-PVKDTKAWSSMIVGLAINGLAED 277

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTA 391
           A+  F +M    V+PN  T+  +L+A
Sbjct: 278 ALEEFFRMEEAKVKPNHVTFIGVLSA 303


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/643 (37%), Positives = 357/643 (55%), Gaps = 55/643 (8%)

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
           S+ N LI  YLK   V  AR VFD +  R  + WNSM+A Y+ N    EA + +  M   
Sbjct: 112 SLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD 171

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN-IRTGLMVAYSKCGKMED 333
           G      TF SV K  +    +   ++ H Q +  G+   +  + + L+  Y+K GKM D
Sbjct: 172 GILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRD 231

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
           A ++ S     KDVV +TA+I G+  +G    ++  F  MT++G+  N +T S +L    
Sbjct: 232 A-RLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCG 290

Query: 392 --QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
             +   S   +H  I+K   E +                                V W++
Sbjct: 291 NLEDLTSGRLIHGLIVKAGLESA--------------------------------VTWTS 318

Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           ++ G  Q G  E A+  +RQ+    + PN FT SSV+ AC++  A +EQGKQ HA  +K 
Sbjct: 319 VIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSL-AMLEQGKQIHAIVMKF 377

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            L+    V +AL+  Y K G+ E A  VF    + D+VS NSMI  YAQ+G   +AL++F
Sbjct: 378 GLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLF 437

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
             M+   LE + +T++GV++AC +AGL++EG   F    N  +I  T +HY+CMVDL  R
Sbjct: 438 SGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGR 497

Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLL 675
           AG L++A  +IN++  +    +WRT+L+ACR+              I L P D   +VLL
Sbjct: 498 AGRLKEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLL 556

Query: 676 SNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKL 735
           SN+YA+TG+W +   ++  M + ++KK    SW++V+ + ++F+AGD SHP    I  KL
Sbjct: 557 SNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKL 616

Query: 736 EELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV-ATPAGAPLQIVKN 794
           EEL  ++K+ GY PDT +VLQD+D+E K   L  HSE+LA+AF L  +      ++I+KN
Sbjct: 617 EELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKN 676

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDY 837
           LRVCGDCHT +K +SK+  RDI+ RD  RFHHF+ GLCSCGDY
Sbjct: 677 LRVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 242/513 (47%), Gaps = 59/513 (11%)

Query: 78  GSTLSSVLKTCGCLFDHVFG-------RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE 130
           G++ S  L+    L     G        ++    +K GF    ++   L+D Y++  +V 
Sbjct: 71  GASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHH--SLGNKLIDAYLKCGSVV 128

Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
             R+VFD++   ++V+W S+++ Y RN  +   ++++ RM  +GI P+ FTFS+V    +
Sbjct: 129 YARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFS 188

Query: 191 DEGIVATAVQVHTMVIKNG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWN 249
           D G+V    + H   +  G G     V +AL+ MY K   +RDAR V D +  +D + + 
Sbjct: 189 DLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFT 248

Query: 250 SMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
           +++ GY  +    E+ + F NM   G E    T  SV+  C   ++L   R +H  ++K 
Sbjct: 249 ALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKA 308

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
           G++                                   V+WT++I G +QNG  ++A+  
Sbjct: 309 GLE---------------------------------SAVTWTSVIVGLVQNGREEIALLK 335

Query: 370 FCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVK 425
           F QM R  + PN FT S +L A  +++      Q+HA ++K   +    VG AL++ Y K
Sbjct: 336 FRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGK 395

Query: 426 KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
            G  + A  VF  + E D+V+ ++M+  YAQ G    A++++  +   G++PN  T+  V
Sbjct: 396 CGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGV 455

Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVS------SALVTMYSKKGNIESASEVFK 539
           ++AC   +  +E+G     C I +   N+  +       + +V +  + G ++ A  +  
Sbjct: 456 LSACN-NAGLLEEG-----CHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLIN 509

Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
           +    D+V W +++     HG  + A  V   +
Sbjct: 510 QVNISDVVIWRTLLSACRIHGDVEMAKRVMNRV 542



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 207/453 (45%), Gaps = 42/453 (9%)

Query: 24  SPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSS 83
           S  Y++K   +FD  P R+ V +N ++  Y R+   +EA++++  +   G+     T SS
Sbjct: 126 SVVYARK---VFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSS 182

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFA-RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
           V K    L     G++ H + V  G    +V V ++LVD+Y +   + D R V D +   
Sbjct: 183 VFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGK 242

Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
           +VV +T+L+ GY+ +  +   L++F  M  +GI+ N +T S+VL    +   + +   +H
Sbjct: 243 DVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIH 302

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
            +++K G E                                 ++TW S++ G V N    
Sbjct: 303 GLIVKAGLE--------------------------------SAVTWTSVIVGLVQNGREE 330

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
            A   F  M  +       T  SV++ C++   L   +Q+H+ V+K G+D D  +   L+
Sbjct: 331 IALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALI 390

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y KCG  E A  +F+ + E+ DVVS  +MI  + QNG    A+  F  M   G+ PN 
Sbjct: 391 DFYGKCGSTEIARSVFNGLLEV-DVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNN 449

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKT-----NYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
            T+  +L+A       +   HI  +     N E +      +++   + G L EA  +  
Sbjct: 450 VTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLIN 509

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
            ++  D+V W  +L+     GD E A ++  ++
Sbjct: 510 QVNISDVVIWRTLLSACRIHGDVEMAKRVMNRV 542



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 190/392 (48%), Gaps = 54/392 (13%)

Query: 264 AFETFNNMGLAGAELTRST--FVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
           A ++F      GA  + S   + S+I+ C   K +    ++ S  LK G  F H++   L
Sbjct: 60  AAKSFFATAHNGASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRG--FHHSLGNKL 117

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
           + AY KCG +  A K+F  +   + +V+W +MI+ +++NG    A++ + +M  +G+ P+
Sbjct: 118 IDAYLKCGSVVYARKVFDEVPH-RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 176

Query: 382 GFTYSIILTAQPAVSPFQVH----AH----IIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            FT+S +  A   +    VH    AH    ++       F VG+AL++ Y K G + +A 
Sbjct: 177 EFTFSSVFKAFSDLG--LVHEGQRAHGQSVVLGVGVSNVF-VGSALVDMYAKFGKMRDAR 233

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
            V + +  KD+V ++A++ GY+  G+   +++++R +T +G++ NE+T SSV+  C    
Sbjct: 234 LVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVL-VCCGNL 292

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
             +  G+  H   +KA L +A                                V+W S+I
Sbjct: 293 EDLTSGRLIHGLIVKAGLESA--------------------------------VTWTSVI 320

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
            G  Q+G  + AL  F++M R  +  +  T   V+ AC+   ++++G+Q   I++     
Sbjct: 321 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMK---F 377

Query: 614 YPTMEHY--SCMVDLYSRAGMLEKAMDIINRM 643
              ++ Y  + ++D Y + G  E A  + N +
Sbjct: 378 GLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 409


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/576 (38%), Positives = 323/576 (56%), Gaps = 57/576 (9%)

Query: 319 TGLMVAYSKCGKMEDASKIFSMMRE---MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR 375
           + L+ A++  G  E A  +   MR      +V++W  ++SG  ++G    AV    +M  
Sbjct: 90  SALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHG 149

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           EG  P+    S  L+A   V       Q+H +++K        V TAL++ Y K G  DE
Sbjct: 150 EGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADE 209

Query: 432 AAKVF--------------------------------ELID---EKDIVAWSAMLAGYAQ 456
             +VF                                E +    E ++V+W++++A   Q
Sbjct: 210 IVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQ 269

Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
            G    AV ++R++ SEG++PN  T   V+ A  A  AA+  G+  H  S++   ++ + 
Sbjct: 270 NGRDLEAVDLFREMQSEGIEPNSVTIPCVLPA-FANIAALMHGRSAHCFSLRKGFHHDIY 328

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V SALV MY+K G +  A  +F+    R++VSWN+MI GYA HG  + A+ +F+ M+   
Sbjct: 329 VGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSK 388

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
            + D +TF  V+ AC+ AG  +EG+ YF+ M ++H I P MEHY+CMV L  RAG L+ A
Sbjct: 389 EKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDA 448

Query: 637 MDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAAT 682
            DIIN+MPF     +W ++L +CR              L  L+P ++  YVLLSN+YA+ 
Sbjct: 449 YDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASK 508

Query: 683 GHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRL 742
             W    R+R +M    +KKE G SWIE+KNK +  LAGD SHP    I  KL+ L+  +
Sbjct: 509 KMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEM 568

Query: 743 KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCH 802
           +  G+ P T YVL D++++ K+ ILS HSE+LA+A GL++T  G PLQ++KNLR+CGDCH
Sbjct: 569 RRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSHGTPLQVIKNLRICGDCH 628

Query: 803 TVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             +K IS  ERR+I VRDTNRFHHFK+G CSC DYW
Sbjct: 629 EAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 181/466 (38%), Gaps = 92/466 (19%)

Query: 69  IRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN 128
           +R +  P     L S LK+C  L               +G +RD  V++SL+  Y+R   
Sbjct: 14  LRHVSFPPDPRLLPSALKSCSALRLARALHAAA---AVAGVSRDAFVASSLLHAYLRFGA 70

Query: 129 VEDGRRVFDDMN-----------------------------------ESNVVSWTSLLSG 153
             D R V D M                                    E NV++W  L+SG
Sbjct: 71  TADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSG 130

Query: 154 YARN-KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
             R+ +  D VL L  RM  EG  P++   S  L  + D G VA   Q+H  V+K G  +
Sbjct: 131 LNRSGRARDAVLALV-RMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRL 189

Query: 213 VTSVCNALISMYLKSKMVRDARAVFD---------------------------------- 238
              V  ALI MY K     +   VFD                                  
Sbjct: 190 DACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFV 249

Query: 239 --GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
             G+E  + ++W S+VA  V N   +EA + F  M   G E    T   V+   A    L
Sbjct: 250 GRGIE-LNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAAL 308

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
              R  H   L+ G   D  + + L+  Y+KCG++ DA  IF  M   ++VVSW AMI G
Sbjct: 309 MHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAM-PYRNVVSWNAMIGG 367

Query: 357 HLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-------QPAVSPFQ--VHAHIIKT 407
           +  +G  + AV  F  M     +P+  T++ +L A       +   S F    H H I  
Sbjct: 368 YAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISP 427

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLA 452
             E  ++    LL    + G LD+A  +  ++  E D   W ++L 
Sbjct: 428 RMEH-YACMVTLLG---RAGKLDDAYDIINQMPFEPDGCIWGSLLG 469



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 157/363 (43%), Gaps = 36/363 (9%)

Query: 40  QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
           + N + +N L+    R    ++A+   + +   G     + +S  L   G + D   G Q
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQ 177

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN------------------- 140
           +H   VK+G   D  V+T+L+D+Y +    ++  RVFD+ +                   
Sbjct: 178 LHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQ 237

Query: 141 ----------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
                           E NVVSWTS+++   +N  +   ++LF  MQ EGI+PNS T   
Sbjct: 238 VSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPC 297

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           VL   A+   +      H   ++ G      V +AL+ MY K   VRDAR +F+ M  R+
Sbjct: 298 VLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRN 357

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
            ++WN+M+ GY  +     A   F +M  +  +    TF  V+  C+        R   +
Sbjct: 358 VVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFN 417

Query: 305 QVL-KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           ++  K+GI         ++    + GK++DA  I + M    D   W +++     +G +
Sbjct: 418 EMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNV 477

Query: 364 DLA 366
            LA
Sbjct: 478 VLA 480



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 35/253 (13%)

Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
           V ++LL+AY++ G   +A  V + +  + +V WSA++A +A  GD EGA  +  ++ S+G
Sbjct: 57  VASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDG 116

Query: 475 VKPNEFTFSSVINA-------------------------CTAPSAA---------VEQGK 500
           V+PN  T++ +++                           T  S A         V  G+
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGE 176

Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
           Q H   +KA      CV++AL+ MY K G  +    VF      D+ S N+++ G +++ 
Sbjct: 177 QLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNA 236

Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
              +AL +F+E   + +E + +++  ++  C   G   E    F  M +E  I P     
Sbjct: 237 QVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSE-GIEPNSVTI 295

Query: 621 SCMVDLYSRAGML 633
            C++  ++    L
Sbjct: 296 PCVLPAFANIAAL 308



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 2/219 (0%)

Query: 37  RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
           R  + N V +  ++    ++    EA++LF  ++  G+     T+  VL     +   + 
Sbjct: 251 RGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMH 310

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
           GR  HC  ++ GF  D+ V ++LVD+Y +   V D R +F+ M   NVVSW +++ GYA 
Sbjct: 311 GRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAM 370

Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ-VHTMVIKNGGEVVTS 215
           +   +  + LF  MQ    KP+  TF+ VLG  +  G         + M  K+G      
Sbjct: 371 HGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRME 430

Query: 216 VCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
               ++++  ++  + DA  + + M  + D   W S++ 
Sbjct: 431 HYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLG 469



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 18/175 (10%)

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V+S+L+  Y + G    A  V      R +V W+++I  +A HG  + A  + + MR   
Sbjct: 57  VASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDG 116

Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
           +E + IT+ G+++    +G   +       M  E  + P     SC +      G +   
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFL-PDATGVSCALSAVGDVGDVAVG 175

Query: 637 MDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSNMYAATGHWQERARV 691
             +   +           V A CRL      D+ +   L +MY   G   E  RV
Sbjct: 176 EQLHGYV-----------VKAGCRL------DACVATALIDMYGKCGRADEIVRV 213


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/658 (37%), Positives = 363/658 (55%), Gaps = 56/658 (8%)

Query: 200 QVHTMVIKNGGEVVTSVCNALI--SMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           QVH  V K G +    +   L+  S       +  AR +F    + D    N+++ G   
Sbjct: 23  QVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAE 82

Query: 258 NELHMEAFETFNNMGL-AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
           ++    +  TF  M     A L   +F  ++K  A+ + L    QLH Q + +G+D    
Sbjct: 83  SDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLF 142

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
           + T L+  YS+CG +  A K+F  M E  +VV+W A+++   + G +  A   F +M   
Sbjct: 143 VGTTLVSMYSECGFVAFAKKVFEEMFE-PNVVAWNAVVTACFRCGDVKGADMMFNRM--- 198

Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
                               PF            ++ +    +L  Y K G L+ A K+F
Sbjct: 199 --------------------PF------------RNLTSWNVMLAGYTKAGELELARKLF 226

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             +  KD V+WS M+ G+A  G    A   +R+L   G++PNE + +  ++AC A + A+
Sbjct: 227 LEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSAC-ADAGAI 285

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICG 555
           E GK  H    K+     + V++AL+  YSK GN+  A  VF+R   KR +VSW SMI G
Sbjct: 286 EFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAG 345

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            A HG+ ++A+++F EM    +  DGI FI ++ AC+HAGL+++G +YF  M + ++I P
Sbjct: 346 LAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEP 405

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RL 661
            +EHY CMVDLY RAG L+KA + I  MP   +A +WRT+L AC              RL
Sbjct: 406 AIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERL 465

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
             L P++S  +VLLSN+YA  G W++ A VR+ M D+++ K  G+S IEV    YSF+AG
Sbjct: 466 SELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAG 525

Query: 722 DISHPQSNQIYSKLEELSTRLKDAG-YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
           ++ +  + + Y KL+E+  +L+  G Y P+   VL DI+DE KE  +S+HSE+LA+AFG+
Sbjct: 526 EVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGI 585

Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
                G+ ++IVKNLRVC DCHTV+KLISK+   +IVVRD +RFH FK G CSC DYW
Sbjct: 586 ARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 195/464 (42%), Gaps = 68/464 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKTCGC 90
           + LF   P  +   +N L+         Q +L  F+ +RR L  PL   + + +LK    
Sbjct: 59  RRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAAS 118

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                 G Q+HC+ +  G    + V T+LV +Y     V   ++VF++M E NVV+W ++
Sbjct: 119 YRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAV 178

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           ++   R         +F+RM    +                                   
Sbjct: 179 VTACFRCGDVKGADMMFNRMPFRNL----------------------------------- 203

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
               +  N +++ Y K+  +  AR +F  M  +D ++W++M+ G+  N    EAF  F  
Sbjct: 204 ----TSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRE 259

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           +   G      +    +  CA    +   + LH  + K+G  +  ++   L+  YSKCG 
Sbjct: 260 LQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGN 319

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +  A  +F  M E + +VSWT+MI+G   +G  + A+  F +M   G+RP+G  +  IL 
Sbjct: 320 VGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILY 379

Query: 391 AQPAVSPFQVHAHIIKTNYEKSFSVGT------------ALLNAYVKKGILDEAAKVFEL 438
           A         HA +I+  YE  + +               +++ Y + G LD+A   +E 
Sbjct: 380 ACS-------HAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKA---YEF 429

Query: 439 IDEKDI----VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           I    +    + W  +L   +  G+ + A ++  +L+   + PN
Sbjct: 430 IIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSE--LDPN 471


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/573 (38%), Positives = 342/573 (59%), Gaps = 40/573 (6%)

Query: 293 TKELRLARQLHSQVLK-NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
            K  R AR+L  ++ + N I ++     GL+  Y + G + +A K+F  M E ++VVSWT
Sbjct: 7   NKRPREARKLFDKMPETNTISWN-----GLVSGYVQNGMISEARKVFDKMPE-RNVVSWT 60

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK 411
           AMI G++Q G I+ A   F +M    V     +++++L              +      K
Sbjct: 61  AMIRGYVQEGLIEEAELLFWRMPERNV----VSWTVMLGGLIEDGRVDEARQLFDMMPVK 116

Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ-- 469
                T +++    +G L EA ++F+ + ++++VAW++M++G    G     +KIY +  
Sbjct: 117 DVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKG 176

Query: 470 -----------LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS 518
                      +  EGV+P+  +  SV++ C +  A+++ G+Q H+  ++++ +  + VS
Sbjct: 177 FELEALALFSLMQREGVRPSFPSVISVLSVCGS-LASLDHGRQVHSQLVRSQFDIDIYVS 235

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           S L+TMY K G++ +A  VF R   +D+V WNS+I GYAQHG  +KALEVF +M    + 
Sbjct: 236 SVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIA 295

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D ITFIGV++AC++ G V EG + F+ M +++ + P  EHY+CMVDL  RAG L +AM+
Sbjct: 296 PDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMN 355

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           +I  MP  A A VW  +L ACR              L+ L+P+++  Y+LLSN+Y++   
Sbjct: 356 LIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSR 415

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL-AGDISHPQSNQIYSKLEELSTRLK 743
           W++   +RK M  + ++K  G SWIEV  K + F   G  SHP+   I  KL +L   L+
Sbjct: 416 WKDVVELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLR 475

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
           +AGY PD S+V+ D+D+E K   L  HSE+LA+A+GL+  P G P++++KNLRVCGD H+
Sbjct: 476 EAGYCPDGSFVMHDVDEEEKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHS 535

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGD 836
            IKLI+++  R+I++RDTNRFHHFK+GLCSC D
Sbjct: 536 TIKLIAQVTGREIILRDTNRFHHFKDGLCSCSD 568



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 181/369 (49%), Gaps = 31/369 (8%)

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E  T   N L+S Y+++ M+ +AR VFD M +R+ ++W +M+ GYV   L  EA   F  
Sbjct: 22  ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWR 81

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRL--ARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           M        R+     + L    ++ R+  ARQL   +    +    N+  GL       
Sbjct: 82  MP------ERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSE---- 131

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-------------AVNFFCQMTR 375
           G++ +A +IF  M + ++VV+WT+MISG   +G                 A+  F  M R
Sbjct: 132 GRLIEAREIFDEMPQ-RNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQR 190

Query: 376 EGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
           EGVRP+  +   +L+   +++      QVH+ ++++ ++    V + L+  Y+K G L  
Sbjct: 191 EGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVT 250

Query: 432 AAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA 491
           A +VF+    KDIV W++++AGYAQ G  E A++++  + S  + P+E TF  V++AC+ 
Sbjct: 251 AKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSY 310

Query: 492 PSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWN 550
                E  + F +   K +++      + +V +  + G +  A  + +    + D + W 
Sbjct: 311 TGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWG 370

Query: 551 SMICGYAQH 559
           +++     H
Sbjct: 371 ALLGACRTH 379



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 181/381 (47%), Gaps = 31/381 (8%)

Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
           LV  Y++   + + R+VFD M E NVVSWT+++ GY +  + +    LF RM     + N
Sbjct: 31  LVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMP----ERN 86

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
             +++ +LG L ++G V  A Q+  M+        T++ + L S   + +++ +AR +FD
Sbjct: 87  VVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCS---EGRLI-EAREIFD 142

Query: 239 GMEDRDSITWNSMVAG-------------YVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
            M  R+ + W SM++G             Y      +EA   F+ M   G   +  + +S
Sbjct: 143 EMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVIS 202

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           V+ +C +   L   RQ+HSQ++++  D D  + + L+  Y KCG +  A ++F      K
Sbjct: 203 VLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSS-K 261

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHI- 404
           D+V W ++I+G+ Q+G  + A+  F  M    + P+  T+  +L+A       +    I 
Sbjct: 262 DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIF 321

Query: 405 --IKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAG---YAQ 456
             +K+ Y+          +++   + G L+EA  + E +  E D + W A+L     +  
Sbjct: 322 ESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKN 381

Query: 457 IGDTEGAVKIYRQLTSEGVKP 477
           +   E A K   QL      P
Sbjct: 382 LDLAEIAAKKLLQLEPNNAGP 402



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 169/357 (47%), Gaps = 38/357 (10%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC- 90
           + +FD+ P+RN V +  ++  Y ++ L +EA  LF  +    +  +   L  +++     
Sbjct: 45  RKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVD 104

Query: 91  ----LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
               LFD +               +DV  ST+++D       + + R +FD+M + NVV+
Sbjct: 105 EARQLFDMMP-------------VKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVA 151

Query: 147 WTSLLSG-------------YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEG 193
           WTS++SG             Y R       L LF  MQ EG++P   +F +V+ VL+  G
Sbjct: 152 WTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRP---SFPSVISVLSVCG 208

Query: 194 IVAT---AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
            +A+     QVH+ ++++  ++   V + LI+MY+K   +  A+ VFD    +D + WNS
Sbjct: 209 SLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNS 268

Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKN 309
           ++AGY  +    +A E F++M  +       TF+ V+  C+ T +++   ++  S   K 
Sbjct: 269 IIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKY 328

Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            +D        ++    + GK+ +A  +   M    D + W A++     +  +DLA
Sbjct: 329 QVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLA 385



 Score = 46.2 bits (108), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 82/204 (40%), Gaps = 40/204 (19%)

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL------- 577
           Y +      A ++F +  + + +SWN ++ GY Q+G   +A +VF +M  +++       
Sbjct: 4   YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMI 63

Query: 578 --------------------EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTM 617
                               E + +++  ++      G VDE +Q FD+M  +  +  T 
Sbjct: 64  RGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVAST- 122

Query: 618 EHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAIYVLLSN 677
                M+D     G L +A +I + MP        R V+A   +IS +  D   +  +  
Sbjct: 123 ----NMIDGLCSEGRLIEAREIFDEMP-------QRNVVAWTSMISGE-KDDGTWSTMIK 170

Query: 678 MYAATGHWQERARVRKLMNDRKVK 701
           +Y   G   E   +  LM    V+
Sbjct: 171 IYERKGFELEALALFSLMQREGVR 194


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/575 (36%), Positives = 341/575 (59%), Gaps = 21/575 (3%)

Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
           ++++F  +++ CA + E +L    H Q++K G ++D  ++TGL+  Y+K G ++ A ++F
Sbjct: 9   SKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVF 68

Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
             M   +DVV+  AMIS   ++G ++ A N F  MT      N  +++ ++T    +   
Sbjct: 69  MGMPR-RDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLGDI 123

Query: 399 QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE-KDIVAWSAMLAGYAQI 457
                +   N  K      A+++ Y K   L  A ++F L+   ++ V W+ M++ Y Q 
Sbjct: 124 NSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQC 183

Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
           G+   A+ +++Q+ SE VKP E T  S+++AC A   A++ G+  H      +L   + +
Sbjct: 184 GEFGTAISMFQQMQSENVKPTEVTMVSLLSAC-AHLGALDMGEWIHGYIRTKRLKIDVVL 242

Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
            +AL+ MY K G +E+A +VF    ++++  WNS+I G   +G  ++A+  F  M ++ +
Sbjct: 243 GNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGI 302

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + DG+TF+G+++ C+H+GL+  GQ+YF  M+  + + P +EHY CMVDL  RAG L++A+
Sbjct: 303 KPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEAL 362

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
           ++I  MP   ++ V  ++L AC+              L+ L P D   YV LSN+YA+  
Sbjct: 363 ELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLS 422

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            W +    RKLM  R V K  G S IEV N  + F+AGD SHPQ  QI + L+E++  LK
Sbjct: 423 RWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELK 482

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
             G+ P+T+ VL DI++E KE  +  HSER+A+AFGL++TP G  +++VKNLR C DCH+
Sbjct: 483 GQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHS 542

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +KLIS   +R+I+VRD  RFHHF+ G CSC DYW
Sbjct: 543 AMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 189/412 (45%), Gaps = 39/412 (9%)

Query: 79  STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           ++ S +L++C    +   G   HC+ +K GF  D+ + T L+D Y +  +++  +RVF  
Sbjct: 11  TSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMG 70

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M   +VV+  +++S  +++   +    LF  M     + NS ++++++      G + +A
Sbjct: 71  MPRRDVVANNAMISALSKHGYVEEARNLFDNMT----ERNSCSWNSMITCYCKLGDINSA 126

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSITWNSMVAGYVT 257
                M   N  + V S  NA+I  Y KSK +  A+ +F  M   R+S+TWN+M++ YV 
Sbjct: 127 ---RLMFDCNPVKDVVSW-NAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQ 182

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                 A   F  M     + T  T VS++  CA    L +   +H  +    +  D  +
Sbjct: 183 CGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVL 242

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              L+  Y KCG +E A  +F  +   K++  W ++I G   NG  + A+  F  M +EG
Sbjct: 243 GNALIDMYCKCGALEAAIDVFHGLSR-KNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEG 301

Query: 378 VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFE 437
           ++P+G T+  IL+          H+ ++    ++ FS                E   V+ 
Sbjct: 302 IKPDGVTFVGILSGCS-------HSGLLSAG-QRYFS----------------EMLGVYG 337

Query: 438 LIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           L  E  +  +  M+    + G  + A+++ R +    +KPN     S++ AC
Sbjct: 338 L--EPGVEHYGCMVDLLGRAGYLKEALELIRAMP---MKPNSMVLGSLLRAC 384



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 187/413 (45%), Gaps = 21/413 (5%)

Query: 175 IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDAR 234
           + P+  +FS +L   A  G        H  ++K G E    +   L+  Y K   ++ A+
Sbjct: 6   VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65

Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTK 294
            VF GM  RD +  N+M++    +    EA   F+NM     E    ++ S+I       
Sbjct: 66  RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITCYCKLG 121

Query: 295 ELRLAR-QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           ++  AR       +K+ + ++      ++  Y K  ++  A ++F +M   ++ V+W  M
Sbjct: 122 DINSARLMFDCNPVKDVVSWN-----AIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTM 176

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNY 409
           IS ++Q G    A++ F QM  E V+P   T   +L+A   +        +H +I     
Sbjct: 177 ISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRL 236

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +    +G AL++ Y K G L+ A  VF  +  K+I  W++++ G    G  E A+  +  
Sbjct: 237 KIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIV 296

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA-KLNNALCVSSALVTMYSKK 528
           +  EG+KP+  TF  +++ C+  S  +  G+++ +  +    L   +     +V +  + 
Sbjct: 297 MEKEGIKPDGVTFVGILSGCSH-SGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRA 355

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICG-YAQHGHTKKALEVFKEMRRQDLEFD 580
           G ++ A E+ +    +     NSM+ G   +     K  ++ +++ +Q LE D
Sbjct: 356 GYLKEALELIRAMPMKP----NSMVLGSLLRACQIHKDTKLGEQVTQQLLELD 404



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 126/288 (43%), Gaps = 14/288 (4%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FY+K       + +F   P+R+ V  N ++    +    +EA NLF  +       + S 
Sbjct: 54  FYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSM 113

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           +     TC C    +   ++  +C      +DV    +++D Y ++  +   + +F  M 
Sbjct: 114 I-----TCYCKLGDINSARLMFDCNP---VKDVVSWNAIIDGYCKSKQLVAAQELFLLMG 165

Query: 141 ES-NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + N V+W +++S Y +       + +F +MQ E +KP   T  ++L   A  G +    
Sbjct: 166 SARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE 225

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
            +H  +     ++   + NALI MY K   +  A  VF G+  ++   WNS++ G   N 
Sbjct: 226 WIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNG 285

Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
              EA   F  M   G +    TFV ++  C+ +  L   ++  S++L
Sbjct: 286 RGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEML 333


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 228/645 (35%), Positives = 362/645 (56%), Gaps = 27/645 (4%)

Query: 119 LVDLYMRT--NNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           L+  Y R+  + +   RRVFD++   + VSW +LL+  A +  +     L   M  +G+ 
Sbjct: 31  LLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLA 90

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
            N+F   + L   A     A   Q+ ++ +K+G        +AL+ +Y K   VRDAR V
Sbjct: 91  SNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQV 150

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FDGM +R++++WN+++AGY  +     A E F  M   G     +TF S++         
Sbjct: 151 FDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLT-AVEGPSC 209

Query: 297 RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISG 356
            L  QLH +++K G      +    + AYS+CG ++D+ +IF  + +++D++SW AM+  
Sbjct: 210 FLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGA 269

Query: 357 HLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTA--QPAVSPFQ---VHAHIIKTNYE 410
           +  NG  D A+ FF +M +E GV P+ ++++ I+++  +      Q   +H  +IK+  E
Sbjct: 270 YTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALE 329

Query: 411 KSFSVGTALLNAYVKKG---ILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
               V  AL+  Y +     ++++A K F  +  KD V+W++ML GY+Q G +  A+K +
Sbjct: 330 GVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFF 389

Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
           R + SE V+ +E+ FS+ + + ++  A ++ GKQ H   I +   +   VSS+L+ MYSK
Sbjct: 390 RCMCSENVRTDEYAFSAALRS-SSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSK 448

Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
            G I+ A + F+   K   V WN+MI GYAQHG  +    +F EM ++    D ITF+G+
Sbjct: 449 SGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGL 508

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           IT+C+HAGLVDEG +  + M  ++ +   MEHY+C VDLY RAG L+KA  +I+ MPF  
Sbjct: 509 ITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEP 568

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
            A VW T+L ACR              L   +P   + YVLLS+MY+  G W +RA V++
Sbjct: 569 DAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQR 628

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           +M  R + K  G+SWIEVKN+ +SF A D SHP+ ++IY  L  L
Sbjct: 629 VMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/571 (28%), Positives = 282/571 (49%), Gaps = 21/571 (3%)

Query: 10  LINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI 69
           L+   ++  P  L +       + +FD  P+R+ V +N LL        H EA  L   +
Sbjct: 31  LLTAYSRSSPDGLAAA------RRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAM 84

Query: 70  RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
              GL      L S L++         G Q+    +KSG A +V  +++L+D+Y +   V
Sbjct: 85  HAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRV 144

Query: 130 EDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL 189
            D R+VFD M E N VSW +L++GY  +      LELF  M+ EG+ P+  TF+++L   
Sbjct: 145 RDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLL--T 202

Query: 190 ADEGIVATAV-QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED-RDSIT 247
           A EG     + Q+H  ++K G  +  +V NA I+ Y +   ++D+R +FDG+ D RD I+
Sbjct: 203 AVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262

Query: 248 WNSMVAGYVTNELHMEAFETF-NNMGLAGAELTRSTFVSVIKLCAT-TKELRLARQLHSQ 305
           WN+M+  Y  N +  EA + F   M  +G      +F S+I  C+    +    R +H  
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGK---MEDASKIFSMMREMKDVVSWTAMISGHLQNGA 362
           V+K+ ++    +   L+  Y++  +   MEDA K F+ +  +KD VSW +M++G+ Q+G 
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLV-LKDTVSWNSMLTGYSQHGL 381

Query: 363 IDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTA 418
              A+ FF  M  E VR + + +S  L +   ++      Q+H  +I + +  +  V ++
Sbjct: 382 SADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSS 441

Query: 419 LLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
           L+  Y K GI+D+A K FE  D+   V W+AM+ GYAQ G  E    ++ ++       +
Sbjct: 442 LIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLD 501

Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
             TF  +I +C+      E  +  +    K  +   +   +  V +Y + G ++ A ++ 
Sbjct: 502 HITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLI 561

Query: 539 KRQR-KRDLVSWNSMICGYAQHGHTKKALEV 568
                + D + W +++     HG+ + A +V
Sbjct: 562 DSMPFEPDAMVWMTLLGACRIHGNVELASDV 592



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 223/455 (49%), Gaps = 22/455 (4%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
           + +FD  P+RN V +N L+  Y        AL LFL + R GL    +T +S+L      
Sbjct: 148 RQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGP 207

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSW 147
            C   H    Q+H + VK G A  + V  + +  Y +  +++D RR+FD + +  +++SW
Sbjct: 208 SCFLMH----QLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISW 263

Query: 148 TSLLSGYARNKMNDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMV 205
            ++L  Y  N M+D  ++ F R MQ  G+ P+ ++F++++   ++ G      +V H +V
Sbjct: 264 NAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLV 323

Query: 206 IKNGGEVVTSVCNALISMYLKSK---MVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
           IK+  E VT VCNALI+MY +     M+ DA   F+ +  +D+++WNSM+ GY  + L  
Sbjct: 324 IKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSA 383

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +A + F  M           F + ++  +    L+L +Q+H  V+ +G   +  + + L+
Sbjct: 384 DALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLI 443

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             YSK G ++DA K F    +    V W AMI G+ Q+G  +     F +M +     + 
Sbjct: 444 FMYSKSGIIDDARKSFEEA-DKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDH 502

Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL------LNAYVKKGILDEAAKVF 436
            T+  ++T+          + I+ T  E  + V   +      ++ Y + G LD+A K+ 
Sbjct: 503 ITFVGLITSCSHAGLVDEGSEILNT-METKYGVPLRMEHYACGVDLYGRAGQLDKAKKLI 561

Query: 437 ELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
           + +  E D + W  +L      G+ E A  +   L
Sbjct: 562 DSMPFEPDAMVWMTLLGACRIHGNVELASDVASHL 596


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/608 (36%), Positives = 358/608 (58%), Gaps = 53/608 (8%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           +++  +KLC   +    A+++H+Q++K+G++    +   L+ AY KC  ++DA  +F  M
Sbjct: 4   SYLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEM 63

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSPF-- 398
            + +D VSW ++++ + Q    +  ++ F  M T + ++P+ F Y+ +L A  ++     
Sbjct: 64  PQ-RDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRL 122

Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
             QVHA  + + +     V ++L++ Y K G+   A  VF+ I  K  V+W+AML+GYA+
Sbjct: 123 GKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYAR 182

Query: 457 IGDTEGAVKIY-----RQLTS--------------------------EGVK-PNEFTFSS 484
            G  + A++++     R L S                          EGV   +    SS
Sbjct: 183 SGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSS 242

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           V+ AC A  A +  GKQ H   I +   + L +S+ALV MY+K  +I +A  VF R   R
Sbjct: 243 VVGAC-ANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHR 301

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           D+VSW S+I G AQHG  K+AL+++ +M   +++ + +TF+G+I AC+HAGLV +G++ F
Sbjct: 302 DVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLF 361

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----- 659
             M+ ++ I P+++ ++C +DL SR+G L +A D+I  MP       W  +L+AC     
Sbjct: 362 KAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGN 421

Query: 660 ---------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                    RL+SL  H+ + YVLLSN+YA  G W++ +RVRKLM D +VK++ GYS I+
Sbjct: 422 TEMGVRIADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSID 481

Query: 711 VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
           +  ++  F AG+  HP  ++I+  L+EL   ++  GY PDTSYVL D++++ KE  L  H
Sbjct: 482 LGKESQVFHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWH 541

Query: 771 SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           SER A+A+GL+    G  ++IVKNLR+CGDCHT +KL S +  ++I+VRD  R+HHFK+G
Sbjct: 542 SERWAVAYGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDG 601

Query: 831 LCSCGDYW 838
            CSC D+W
Sbjct: 602 RCSCNDFW 609



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 195/410 (47%), Gaps = 41/410 (10%)

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           A ++H  ++K+G      + N L+  Y K  +++DA  +FD M  RD ++W S++  Y  
Sbjct: 21  AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFV--SVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
            +L  +    F+ M      L    FV  +++K CA+   LRL +Q+H++ + +    D 
Sbjct: 81  AKLPNKTLSIFHYM-FTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDD 139

Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF----- 370
            +++ L+  Y+KCG    A  +F  +  +K  VSWTAM+SG+ ++G  D A+  F     
Sbjct: 140 VVKSSLVDMYAKCGLPSIARSVFDSIL-VKTSVSWTAMLSGYARSGLKDEAMELFLRTPV 198

Query: 371 --------------------------CQMTREGVR---PNGFTYSIILTAQPAVSPF--Q 399
                                      +M REGV    P   +  +   A  AV     Q
Sbjct: 199 RNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQ 258

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           +H  +I + YE    +  AL++ Y K   +  A  VF  +  +D+V+W++++ G AQ G 
Sbjct: 259 IHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGR 318

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
            + A+ +Y Q+    +KPNE TF  +I AC+      +  K F A     +++ +L + +
Sbjct: 319 AKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFT 378

Query: 520 ALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGHTKKALEV 568
             + + S+ G++  A ++ K    K D  +W +++     HG+T+  + +
Sbjct: 379 CFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRI 428



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 206/432 (47%), Gaps = 41/432 (9%)

Query: 97  GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
            +++H + VKSG  +   +  +L+D Y + N ++D   +FD+M + + VSW S+L+ Y +
Sbjct: 21  AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDHVSWASILTAYNQ 80

Query: 157 NKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            K+ ++ L +FH M   + ++P+ F ++T+L   A    +    QVH   + +       
Sbjct: 81  AKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDV 140

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF-----NN 270
           V ++L+ MY K  +   AR+VFD +  + S++W +M++GY  + L  EA E F      N
Sbjct: 141 VKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRN 200

Query: 271 M--------GLAGA-----------ELTRS--------TFVSVIKLCATTKELRLARQLH 303
           +        GL  +           E+ R            SV+  CA    L L +Q+H
Sbjct: 201 LYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIH 260

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
             V+ +G +    I   L+  Y+KC  +  A  +F+ M   +DVVSWT++I G  Q+G  
Sbjct: 261 GLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLH-RDVVSWTSIIVGAAQHGRA 319

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE-----KSFSVGTA 418
             A++ + QM    ++PN  T+  ++ A            + K   E      S  + T 
Sbjct: 320 KEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTC 379

Query: 419 LLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV-K 476
            L+   + G L+EA  + + +  K D   W+A+L+     G+TE  V+I  +L S  + +
Sbjct: 380 FLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHE 439

Query: 477 PNEFTFSSVINA 488
           P+ +   S + A
Sbjct: 440 PSTYVLLSNVYA 451



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 169/370 (45%), Gaps = 38/370 (10%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF---LGIRRLGLPLFGSTLSSVLKTCGC 90
           LFD  PQR+ V +  +L  Y +  L  + L++F       RL    F    +++LK C  
Sbjct: 59  LFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHF--VYATLLKACAS 116

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           L     G+QVH   V S F  D  V +SLVD+Y +       R VFD +     VSWT++
Sbjct: 117 LCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAM 176

Query: 151 LSGYARNKMNDRVLELFHR-------------------------------MQVEGIK-PN 178
           LSGYAR+ + D  +ELF R                               M+ EG+   +
Sbjct: 177 LSGYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVD 236

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
               S+V+G  A+  ++    Q+H +VI +G E    + NAL+ MY K   +  AR VF+
Sbjct: 237 PLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFN 296

Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
            M  RD ++W S++ G   +    EA + ++ M LA  +    TFV +I  C+    +  
Sbjct: 297 RMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSK 356

Query: 299 ARQLHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
            R+L   ++++  I     + T  +   S+ G + +A  +   M    D  +W A++S  
Sbjct: 357 GRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSAC 416

Query: 358 LQNGAIDLAV 367
             +G  ++ V
Sbjct: 417 KHHGNTEMGV 426



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 98/182 (53%), Gaps = 3/182 (1%)

Query: 30  KDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLK 86
           KD++  LF R+P RN   +  L+    +     +   +F+ +RR G+ +     LSSV+ 
Sbjct: 186 KDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVG 245

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L     G+Q+H   + SG+   + +S +LVD+Y + +++   R VF+ M   +VVS
Sbjct: 246 ACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVS 305

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           WTS++ G A++      L+L+ +M +  IKPN  TF  ++   +  G+V+   ++   +I
Sbjct: 306 WTSIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMI 365

Query: 207 KN 208
           ++
Sbjct: 366 ED 367


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 249/802 (31%), Positives = 416/802 (51%), Gaps = 62/802 (7%)

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D    + VH   +K     D ++S +L+  Y++ N      R+F  +   NVVS+T+L+S
Sbjct: 79  DTHLAKTVHATLLKRD-EEDTHLSNALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLIS 137

Query: 153 GYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADE-GIVATAVQVHTMVIKNGG 210
             ++++ +   L LF RM     + PN +T+  VL   +         +Q+H   +K   
Sbjct: 138 FLSKHRQH-HALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAH 196

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
                V NAL+S+Y K      A  +F+ +  RD  +WN++++  + + L+  AF  F N
Sbjct: 197 FDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRN 256

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M    A       +S+  L   +  L   +Q+H+  +K G++ D N+  GL+  YSK G 
Sbjct: 257 MQATDAFRVDDFTLSI--LLTASASLMEGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGN 314

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVN---------------------- 368
           ++D   +F  MR ++DV++WT M++ +++ G ++LA+                       
Sbjct: 315 VDDVEWLFEGMR-VRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCR 373

Query: 369 ---------FFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSV 415
                     F +M  EG+    F+ + ++ A   +  +    QVH   +K  +  +  V
Sbjct: 374 NEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYV 433

Query: 416 GTALLNAYVKKGILDEAAKVFEL--IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
             ALL+ Y + G + +A K+F    ++E   V W+AM+ GYA+ G  E A+ ++    S+
Sbjct: 434 EAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSD 493

Query: 474 G-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
           G V  +E   +S++  C      ++ GKQ H   IK  L   L V +A+V+MY K G+++
Sbjct: 494 GKVIMDEVAAASMLGLC-GTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVD 552

Query: 533 SASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC- 591
            A +VF      D+V+WN++I G   H    +ALE++ EM  + ++ + +TF+ +I+A  
Sbjct: 553 DAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYR 612

Query: 592 -THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
            T+  LVD+ +  F+ M   + I PT  HY+  + +    G+L++A++ IN MPF  SA 
Sbjct: 613 QTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSAL 672

Query: 651 VWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMN 696
           VWR +L  CRL              ++L+P D + ++L+SN+Y+A+G W     VR+ M 
Sbjct: 673 VWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMR 732

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
           ++  +K    SWI  + K  SF   D SHPQ   I   LE L       GY+PDTS+VL 
Sbjct: 733 EKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGLEILILECLKIGYEPDTSFVLH 792

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           ++++ HK+  L  HS +LA  +G++ T  G P++IVKN+ +CGDCH  +K  S + +RDI
Sbjct: 793 EVEEHHKKIFLFHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVTKRDI 852

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
            +RD++ FH F  G CSC D W
Sbjct: 853 FLRDSSGFHCFSNGQCSCKDCW 874



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 228/504 (45%), Gaps = 62/504 (12%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVLKTCGCLF 92
           LF   P  N V Y  L+    +   H  AL+LFL +  R  LP    T  +VL  C  L 
Sbjct: 120 LFLSLPSPNVVSYTTLISFLSKHRQHH-ALHLFLRMTTRSHLPPNEYTYVAVLTACSSLL 178

Query: 93  DHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
            H  FG Q+H   +K+       V+ +LV LY +  +     ++F+ +   ++ SW +++
Sbjct: 179 HHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTII 238

Query: 152 SGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           S   ++ + D    LF  MQ  +  + + FT S +L   A    +    QVH   +K G 
Sbjct: 239 SAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASAS---LMEGQQVHAHAVKLGL 295

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV------------------ 252
           E   +V N LI  Y K   V D   +F+GM  RD ITW  MV                  
Sbjct: 296 ETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDE 355

Query: 253 -------------AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
                        AG+  NE   EA   F  M   G ELT  +  SV+  C    + +++
Sbjct: 356 MPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVS 415

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM--MREMKDVVSWTAMISGH 357
           +Q+H   +K G   +  +   L+  Y++CG+M DA K+F    + E   VV WTAMI G+
Sbjct: 416 KQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVV-WTAMICGY 474

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------------QVHAHI 404
            +NG  + A+  F     +G         +I+    A S               Q+H H+
Sbjct: 475 ARNGQPEEAIYLFHVGRSDG--------KVIMDEVAAASMLGLCGTIGHLDMGKQIHCHV 526

Query: 405 IKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAV 464
           IK     +  VG A+++ Y K G +D+A KVF  +   DIV W+ +++G       + A+
Sbjct: 527 IKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRAL 586

Query: 465 KIYRQLTSEGVKPNEFTFSSVINA 488
           +I+ ++  EG+KPN+ TF  +I+A
Sbjct: 587 EIWVEMLGEGIKPNQVTFVLIISA 610



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 158/304 (51%), Gaps = 18/304 (5%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           + +  + + + + +  LA+ +H+ +LK   + D ++   L+  Y K      A ++F  +
Sbjct: 66  SLLHALHVSSRSGDTHLAKTVHATLLKRDEE-DTHLSNALISTYLKLNLFPHALRLFLSL 124

Query: 342 REMKDVVSWTAMIS---GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV--- 395
               +VVS+T +IS    H Q+ A+ L   F    TR  + PN +TY  +LTA  ++   
Sbjct: 125 PS-PNVVSYTTLISFLSKHRQHHALHL---FLRMTTRSHLPPNEYTYVAVLTACSSLLHH 180

Query: 396 --SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
                Q+HA  +KT +  S  V  AL++ Y K      A K+F  I  +DI +W+ +++ 
Sbjct: 181 FHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISA 240

Query: 454 YAQIGDTEGAVKIYRQL-TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
             Q    + A +++R +  ++  + ++FT S ++ A    SA++ +G+Q HA ++K  L 
Sbjct: 241 ALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTA----SASLMEGQQVHAHAVKLGLE 296

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
             L V + L+  YSK GN++    +F+  R RD+++W  M+  Y + G    AL+VF EM
Sbjct: 297 TDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEM 356

Query: 573 RRQD 576
             ++
Sbjct: 357 PEKN 360


>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
 gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
          Length = 760

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 234/761 (30%), Positives = 406/761 (53%), Gaps = 29/761 (3%)

Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
           +++G+   + +S +L+  Y+R  +    R +FD M   +VV+W +L++GYA        L
Sbjct: 2   IRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSAL 61

Query: 165 ELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
             F   + +G +  + FT++ VL      G   +    H + + +G      V N++I M
Sbjct: 62  GAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVIDM 121

Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
           Y K +M+ + R  FD  E+RD ++WN +++ YV       A      M  +G EL     
Sbjct: 122 YAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFAL 181

Query: 284 VSVIKLCATTKELR-LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR 342
             ++K C+  ++   + R LH  V+K G+D D  + + ++  Y+K G +E+A K+F  + 
Sbjct: 182 GGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSIP 241

Query: 343 EMKDVVSWTAMISGHLQNG-----AIDL-AVNFFCQMTREGVRPNGFTYSIILTA---QP 393
             ++VV +  MI+G  + G      I + AV  +  M R  +RP+ FT+  +L       
Sbjct: 242 S-QNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTN 300

Query: 394 AVSPF-QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
           AV  + Q+HAH+I   +E    +G AL+N Y K  ++D++ + F    +++I  W++M+ 
Sbjct: 301 AVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMIT 360

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
            + +   ++ A+ +++ L   GV+P++FT SSV+NAC   S  +   +Q H  ++K+  +
Sbjct: 361 AFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPI-ACEQIHCYAVKSGFD 419

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
                 ++ + MY   G++++A + F+R    D  SW+ MI  YA HGH ++AL +FK+M
Sbjct: 420 RFTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKM 479

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
           R   +  +   F+ V+ AC+H GL+DEG ++++ MV+++   P ++H +CMVDL    G 
Sbjct: 480 RDCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGK 539

Query: 633 LEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNM 678
           +  A D IN       + +W T+L ACR              L++L+P  ++ YV+L N+
Sbjct: 540 VADAEDFINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPFAASSYVMLYNL 599

Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
           Y   G      R R  M +R + KE+G SW E       F+ GD S  Q +  +++LEEL
Sbjct: 600 YMDAGKISLAMRTRGQMRERGMTKESGVSWAEFGGSCQHFVDGDNSCSQKDATFTRLEEL 659

Query: 739 STRLKDAGYKPDTS-YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
             R+K    +   + + L   + +  E  + +H E LA+A GL   P  AP++++KN R+
Sbjct: 660 LVRVKQKTERSSMNVWELGFQNRKVSENSIGKHGELLAVALGLSTLPNTAPVRVMKNQRM 719

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             + H  +KL+S+ E R+I++RD  RFHHF +G CSC  YW
Sbjct: 720 SWEGHETLKLLSESENREIIIRDPTRFHHFSQGSCSCRGYW 760



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 6/264 (2%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCR------DSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT 87
           +F   P +N V YN ++  + R        +  EA+ ++  + R  +     T  SVL+ 
Sbjct: 236 VFGSIPSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEV 295

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C         RQ+H   +  GF  D  +  +L++LY +   V+D  R F    +  + +W
Sbjct: 296 CNLTNAVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTW 355

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           TS+++ + RN+ +D+ L LF  ++  G++P+ FT S+V+   AD  +     Q+H   +K
Sbjct: 356 TSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVK 415

Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
           +G +  T   N+ I MY  +  ++ A+  F+ +   D+ +W+ M+  Y  +    EA   
Sbjct: 416 SGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLL 475

Query: 268 FNNMGLAGAELTRSTFVSVIKLCA 291
           F  M      +    F++V+  C+
Sbjct: 476 FKKMRDCSVIINEFAFLAVLVACS 499



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 129/264 (48%), Gaps = 3/264 (1%)

Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
           +I+  Y     +   LL AYV+      A  +F+ +  +D+V W+ ++AGYA  G    A
Sbjct: 1   MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60

Query: 464 VKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
           +  +R    +G V  + FT+++V+ AC   +     G+  H  ++ + L     VS++++
Sbjct: 61  LGAFRDARRDGAVAVDRFTYAAVLAACGG-AGDWRSGRAAHGLAVVSGLARTAFVSNSVI 119

Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
            MY+K   I+     F R  +RD VSWN ++  Y + G  + A  V   M R  +E D  
Sbjct: 120 DMYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAF 179

Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINR 642
              G++ AC+     ++ ++     V +  +   +   S MVD+Y++ G LE+A+ +   
Sbjct: 180 ALGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGS 239

Query: 643 MPFAASATVWRTVLAACRLISLQP 666
           +P + +  ++ T++A    +   P
Sbjct: 240 IP-SQNVVIYNTMIAGFARLGNDP 262



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 5/175 (2%)

Query: 26  FYSKK---DQSL--FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
            YSK    D SL  F R+P++    +  ++  + R+    +ALNLF G+R  G+     T
Sbjct: 330 LYSKARLVDDSLRCFHRTPKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFT 389

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           +SSV+  C  L   +   Q+HC  VKSGF R      S +++Y  T +++  ++ F+ + 
Sbjct: 390 MSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERIP 449

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
             +  SW+ ++  YA +      L LF +M+   +  N F F  VL   + +G++
Sbjct: 450 SLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVIINEFAFLAVLVACSHQGLI 504


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/575 (36%), Positives = 333/575 (57%), Gaps = 22/575 (3%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           ++  V +       L+L  Q+H+ +L  G+     + + ++  Y+  G ++ +  +F+  
Sbjct: 72  SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFN-- 129

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVH 401
             + D  ++  ++   ++  ++ +       + R G++ + +  + ++            
Sbjct: 130 -GIGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDA 188

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
             +      +  S   ALL  Y K G +D A  +FE +  ++IV+W+ M++GY+Q G  +
Sbjct: 189 GKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQ 248

Query: 462 GAVKIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
            A+ ++ ++  E  GV+PN  T  SV+ AC A  + +E+G+Q H  + +  LN+   V  
Sbjct: 249 QALSLFDEMVKEDSGVRPNWVTIMSVLPAC-AQLSTLERGRQIHELACRMGLNSNASVLI 307

Query: 520 ALVTMYSKKGNIESASEVFKR--QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
           AL  MY+K G++  A   F +  + +++L++WN+MI  YA +GH  +A+  F+EM +  +
Sbjct: 308 ALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGI 367

Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
           + D ITF G+++ C+H+GLVD G +YF+ M   + I P +EHY+C+ DL  RAG L +A 
Sbjct: 368 QPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEAS 427

Query: 638 DIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATG 683
            ++  MP  A  ++W ++LAACR              L  L+P ++  YVLLSNMYA  G
Sbjct: 428 KLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAG 487

Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
            WQE  ++R ++  +  KK  G SWIE+  K + FL GD SHPQ  +IY  LE L  ++K
Sbjct: 488 RWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMK 547

Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
            AGY PDTSYVL DI +E KE  L  HSE+LA+AFG++ TPA   L++ KNLR+CGDCHT
Sbjct: 548 AAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHT 607

Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            +  IS++  R+++VRD NRFHHFK G CSCGDYW
Sbjct: 608 AMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 642



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 179/424 (42%), Gaps = 78/424 (18%)

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
            P   +++ V   L    ++    QVH  ++  G +    V + +++ Y  S  +  + +
Sbjct: 67  PPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVS 126

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           VF+G+ D                                       TF  V+K       
Sbjct: 127 VFNGIGD-------------------------------------YFTFPFVLKSSVELLS 149

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMR------------- 342
           + + + +H  +L+ G+ FD  + T L++ Y KCG++ DA K+F  M              
Sbjct: 150 VWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAG 209

Query: 343 -----------------EMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE--GVRPNGF 383
                              +++VSWT MISG+ Q+G    A++ F +M +E  GVRPN  
Sbjct: 210 YTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWV 269

Query: 384 TYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           T   +L A   +S      Q+H    +     + SV  AL   Y K G L +A   F+ +
Sbjct: 270 TIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKL 329

Query: 440 --DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVE 497
             +EK+++AW+ M+  YA  G    AV  +R++   G++P++ TF+ +++ C+  S  V+
Sbjct: 330 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSH-SGLVD 388

Query: 498 QG-KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICG 555
            G K F+  S    +N  +   + +  +  + G +  AS++          S W S++  
Sbjct: 389 VGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 448

Query: 556 YAQH 559
             +H
Sbjct: 449 CRKH 452



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 145/334 (43%), Gaps = 58/334 (17%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   VLK+   L     G+ VH   ++ G   D+ V+TSL+ LY +   + D  +VFD+M
Sbjct: 136 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 195

Query: 140 N-------------------------------ESNVVSWTSLLSGYARNKMNDRVLELFH 168
                                             N+VSWT+++SGY+++ +  + L LF 
Sbjct: 196 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 255

Query: 169 RMQVE--GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK 226
            M  E  G++PN  T  +VL   A    +    Q+H +  + G     SV  AL +MY K
Sbjct: 256 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 315

Query: 227 SKMVRDARAVFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
              + DAR  FD +   +++ I WN+M+  Y +    ++A  TF  M  AG +    TF 
Sbjct: 316 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 375

Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV------------AYSKCGKME 332
            ++  C+           HS ++  G+ + +++ T   +               + G++ 
Sbjct: 376 GLLSGCS-----------HSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLA 424

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           +ASK+   M        W ++++   ++  +++A
Sbjct: 425 EASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMA 458



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 145/305 (47%), Gaps = 21/305 (6%)

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW-----TSL 150
            G QVH   +  G      V + +V  Y  + +++    VF+ + +     +       L
Sbjct: 88  LGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDYFTFPFVLKSSVEL 147

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIKNG 209
           LS +    ++  +L +       G++ + +  ++++ +    G +  A +V   M I++ 
Sbjct: 148 LSVWMGKCVHGLILRI-------GLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRD- 199

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                S  NAL++ Y KS  +  A A+F+ M  R+ ++W +M++GY  + L  +A   F+
Sbjct: 200 ----VSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 255

Query: 270 NMGL--AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
            M    +G      T +SV+  CA    L   RQ+H    + G++ + ++   L   Y+K
Sbjct: 256 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 315

Query: 328 CGKMEDASKIFSMM-REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           CG + DA   F  + R  K++++W  MI+ +   G    AV+ F +M + G++P+  T++
Sbjct: 316 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 375

Query: 387 IILTA 391
            +L+ 
Sbjct: 376 GLLSG 380



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 4/172 (2%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR--LGLPLFGSTLSSVLKTCGC 90
           ++F+R P RN V +  ++  Y +  L Q+AL+LF  + +   G+     T+ SVL  C  
Sbjct: 221 AIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQ 280

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN--ESNVVSWT 148
           L     GRQ+H    + G   + +V  +L  +Y +  ++ D R  FD +N  E N+++W 
Sbjct: 281 LSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWN 340

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
           ++++ YA      + +  F  M   GI+P+  TF+ +L   +  G+V   ++
Sbjct: 341 TMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLK 392


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 232/671 (34%), Positives = 357/671 (53%), Gaps = 48/671 (7%)

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
           V+   A  G +A   ++H ++ + G      V N L+ MY K   + +AR VF+    ++
Sbjct: 40  VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE-LRLARQLH 303
             +W  ++     +    EA   F  M   G +    +F + I  C+   E L   R LH
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
           + + + G        T L+  YSKCG +E++ + F  M E  + VSW AMI+   ++   
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTE-PNAVSWNAMIAAFAEHRRG 218

Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAY 423
             A+    +M  EG+R                                   VGT L+N Y
Sbjct: 219 LEALRTLQKMFLEGIRAC-----------------------------SDVVVGTTLVNMY 249

Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
            K   L +A   F  + E +I+ W+ +++ Y Q    + A++++R++   G++ +E TF 
Sbjct: 250 AKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFI 309

Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKL-NNALCVSSALVTMYSKKGNIESASEVFKRQR 542
           +++ AC  P  A+E G+  HAC  +  L +N   + + ++ MY K G+++ A  +FK   
Sbjct: 310 NILGACCVP-VALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMS 368

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA-CTHAGLVDEGQ 601
           + D+++WN+MI  Y QHGHT +AL  ++ M+ + +  D  T++ VI A C +AGL +E  
Sbjct: 369 QPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAH 428

Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
            YF  M  +H + P   HY CMV+   +AG L  A  +I  MPF      W + LA CR 
Sbjct: 429 AYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRS 488

Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
                         I + P  S  YV L+ ++A  G +QE +R+RKLM DR ++K AG S
Sbjct: 489 HGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGRS 548

Query: 708 WIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAIL 767
            I++    Y F AGD S+P+S +I+ +L+ L   +K AGY PD ++V  D++   KE +L
Sbjct: 549 IIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVAHDVEAGQKEPLL 608

Query: 768 SQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHF 827
             HSERLAIAFG+++T  G PL+I+KNLRVCGDCHT+ KL SK+ RR+I+VRD+NRFHHF
Sbjct: 609 FAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREIIVRDSNRFHHF 668

Query: 828 KEGLCSCGDYW 838
           K G CSC D+W
Sbjct: 669 KNGSCSCKDFW 679



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 238/509 (46%), Gaps = 54/509 (10%)

Query: 84  VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
           V+++C  L     GR++H    + G   DV VS  LV +Y +  ++E+ R VF+     N
Sbjct: 40  VIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99

Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL-ADEGIVATAVQVH 202
           V SWT L++  A++  +   L LF+ M  +GI+P+S +F+  +    A    +     +H
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALH 159

Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
            ++ + G +       +L+SMY K   + ++   F+ M + ++++WN+M+A +  +   +
Sbjct: 160 ALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGL 219

Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           EA  T   M L G           I+ C+                      D  + T L+
Sbjct: 220 EALRTLQKMFLEG-----------IRACS----------------------DVVVGTTLV 246

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             Y+KC  + DA+  F  ++E  ++++W  +IS ++Q+     A+  F +M   G+  + 
Sbjct: 247 NMYAKCSGLHDANAAFVKLQE-PNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLEMDE 305

Query: 383 FTYSIILTAQPAVSPFQ----VHA----HIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            T+  IL A       +    +HA    H + +N+    +V   +LN Y K G L +A  
Sbjct: 306 VTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENV---ILNMYGKCGSLQDAEA 362

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           +F+ + + D++AW+ M+A Y Q G T  A++ Y  +  EGV P+++T+ SVI+A  A + 
Sbjct: 363 MFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAG 422

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSA----LVTMYSKKGNIESASEVFK-RQRKRDLVSW 549
             E+    HA  +  + ++ +         +V    K G +  A  + +    + D+++W
Sbjct: 423 LPEEA---HAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTW 479

Query: 550 NSMICGYAQHGHTKKALEVFKEMRRQDLE 578
            S +     HG  K+     K   R D E
Sbjct: 480 TSFLANCRSHGDMKRGKLAAKGAIRIDPE 508



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 211/449 (46%), Gaps = 50/449 (11%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+ +P +N   +  L+    +    QEAL LF  + + G+     + ++ +  C    +
Sbjct: 91  VFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPE 150

Query: 94  HV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
            +  GR +H    + GF   V  +TSLV +Y +  ++E+  R F+ M E N VSW ++++
Sbjct: 151 FLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIA 210

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            +A ++     L    +M +EGI+  S                               +V
Sbjct: 211 AFAEHRRGLEALRTLQKMFLEGIRACS-------------------------------DV 239

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
           V  V   L++MY K   + DA A F  +++ + ITWN +++ YV +    EA E F  M 
Sbjct: 240 V--VGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRML 297

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAYSKCGKM 331
           L G E+   TF++++  C     L   R +H+ V ++ +  +H  +   ++  Y KCG +
Sbjct: 298 LLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSL 357

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           +DA  +F  M +  DV++W  MI+ + Q+G    A+ F+  M  EGV P+ +TY  ++ A
Sbjct: 358 QDAEAMFKSMSQ-PDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDA 416

Query: 392 QPAVS--PFQVHAHIIKTNYEKSFSVGTA----LLNAYVKKGILDEAAKVFELID-EKDI 444
             A +  P + HA+ +    +     G      ++ +  K G L +A  + + +  E D+
Sbjct: 417 SCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDV 476

Query: 445 VAWSAMLAGYAQIGD-------TEGAVKI 466
           + W++ LA     GD        +GA++I
Sbjct: 477 LTWTSFLANCRSHGDMKRGKLAAKGAIRI 505



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 6/211 (2%)

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           S +L+   Q+G    A+   ++     +K        VI +C A   A+ +G++ H    
Sbjct: 7   STLLSKRQQLGQIAAAIDALQKRKDADLK----ECVRVIQSC-ARLGALAEGRRIHQLMR 61

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +  L + + VS+ LV MY K G++E A  VF+    +++ SW  +I   AQHG +++AL 
Sbjct: 62  RVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALA 121

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLY 627
           +F EM +Q ++   ++F   I AC+         +    ++  +     +   + +V +Y
Sbjct: 122 LFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMY 181

Query: 628 SRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
           S+ G LE++M     M    +A  W  ++AA
Sbjct: 182 SKCGSLEESMRTFESMT-EPNAVSWNAMIAA 211


>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/573 (39%), Positives = 318/573 (55%), Gaps = 54/573 (9%)

Query: 283 FVSVIKLCA---TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           F+S  +L      +K +    Q+H+ + ++G+D    +   L  +Y+  G+++ +  +F 
Sbjct: 27  FISTNRLAVLIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFG 86

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ 399
             +    V  WTA+I GH   G +  A   F  M                          
Sbjct: 87  RTQN-PSVFFWTAIIHGHALRGDVVSAQQLFDTMP------------------------- 120

Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
                     EKS    TA+L  Y K G LD A  +F+ ++E+D V W+ M+ GY Q G 
Sbjct: 121 ----------EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGM 170

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
              A+ ++R++     KPNE T  SV++AC     A+E G+  H+      +   + V +
Sbjct: 171 PNEALVLFRRMLKAKAKPNEVTVLSVLSAC-GQLGALESGRWVHSYIENNGIQFNVHVGT 229

Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
           ALV MYSK G++E A  VF +   +D+V+WNSMI GYA HG +++AL++FK M R  L  
Sbjct: 230 ALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHP 289

Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
             ITFIG+++AC H+G V EG   F+ M +E+ I P +EHY CMV+L  RAG +E+A ++
Sbjct: 290 TNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYEL 349

Query: 640 INRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHW 685
           +  M       +W T+L ACRL              +     +S  Y+LLSN+YAA G+W
Sbjct: 350 VKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNW 409

Query: 686 QERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA 745
              AR+R +M D  VKKE G S IEV NK + FLAG ++HP+  +IY  LEE++  LK  
Sbjct: 410 DGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSH 469

Query: 746 GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVI 805
           GY P T  VL DI +  KE  L  HSE+LAIAFGL+ T  G  ++IVKNLRVC DCH V 
Sbjct: 470 GYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVT 529

Query: 806 KLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           KLISK+  R IVVRD NRFHHF  G CSCGDYW
Sbjct: 530 KLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 3/252 (1%)

Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
           T+++  Y +   ++  R +FD M E + V W  ++ GY +N M +  L LF RM     K
Sbjct: 128 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 187

Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
           PN  T  +VL      G + +   VH+ +  NG +    V  AL+ MY K   + DAR V
Sbjct: 188 PNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLV 247

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKEL 296
           FD ++D+D + WNSM+ GY  +    EA + F +M   G   T  TF+ ++  C  +  +
Sbjct: 248 FDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWV 307

Query: 297 RLARQLHSQVLKNGIDFDHNIR-TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMI 354
                + ++ +K+    +  I   G MV    + G +E A ++   M    D V W  ++
Sbjct: 308 TEGWDIFNK-MKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 366

Query: 355 SGHLQNGAIDLA 366
                +G I L 
Sbjct: 367 GACRLHGKIALG 378


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/743 (32%), Positives = 404/743 (54%), Gaps = 34/743 (4%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVL 85
           Y++K   +F++ P+RN V ++ ++        ++E+L +FL   R          LSS +
Sbjct: 97  YARK---VFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFI 153

Query: 86  KTCGCLFDHVFGR----QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
           + C  L     GR    Q+    VKS F RDV V T L+D Y++  N++  R VFD + E
Sbjct: 154 QACSGLDGS--GRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPE 211

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            + V+WT+++SG  +   +   L+LF+++    + P+ +  STVL   +    +    Q+
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQI 271

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H  +++ G E   S+ N LI  Y+K   VR A  +FDGM +++ I+W ++++GY  N LH
Sbjct: 272 HAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLH 331

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
            EA E F +M   G +       S++  CA+   L    Q+H+  +K  +  D  +   L
Sbjct: 332 KEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSL 391

Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA---IDLAVNFFCQMTREGV 378
           +  Y+KC  + +A K+F +     DVV + AMI G+ + G    +  A+N F  M    +
Sbjct: 392 IDMYAKCDCLTEARKVFDIF-AADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLI 450

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           RP+  T+  +L A  +++      Q+H  + K         G+AL+  Y     L ++  
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRL 510

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
           VF+ +  KD+V W++M +GY Q  + E A+ ++ +L     +P+EFTF  ++ A     A
Sbjct: 511 VFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTA-AGNLA 569

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           +++ G++FH   +K  L     +++AL+ MY+K G+ E A + F     RD+V WNS+I 
Sbjct: 570 SLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            YA HG  +KAL++ ++M  + +E + ITF+GV++AC+HAGLV++G + F++M+    I 
Sbjct: 630 SYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIE 688

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------R 660
           P  EHY CMV L  RAG L +A ++I +MP   +A VWR++L+ C               
Sbjct: 689 PETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEM 748

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
            I   P DS  + LLSN+YA+ G W +  +VR+ M    V KE G SWIE+  + + FL+
Sbjct: 749 AILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLS 808

Query: 721 GDISHPQSNQIYSKLEELSTRLK 743
            D SH ++NQIY  L++L  +++
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQIR 831



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 159/574 (27%), Positives = 288/574 (50%), Gaps = 24/574 (4%)

Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
           VH + + SG   D  +S  L++LY R   +   R+VF+ M E N+V+W++++S    +  
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 160 NDRVLELFHRM-QVEGIKPNSFTFSTVLGVLA--DEGIVATAVQVHTMVIKNGGEVVTSV 216
            +  L +F    +     PN +  S+ +   +  D        Q+ + ++K+  +    V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
              LI  YLK   +  AR VFD + ++ ++TW +M++G V       + + F  +     
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
                   +V+  C+    L   +Q+H+ +L+ G + D ++   L+ +Y KCG++  A K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F  M   K+++SWT ++SG+ QN     A+  F  M + G++P+ F  S ILT+  ++ 
Sbjct: 306 LFDGMPN-KNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLH 364

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 QVHA+ IK N      V  +L++ Y K   L EA KVF++    D+V ++AM+ 
Sbjct: 365 ALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIE 424

Query: 453 GYAQIG---DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
           GY+++G   +   A+ I+  +    ++P+  TF S++ A +A   ++   KQ H    K 
Sbjct: 425 GYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA-SASLTSLGLSKQIHGLMFKF 483

Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
            LN  +   SAL+ +YS    ++ +  VF   + +DLV WNSM  GY Q    ++AL +F
Sbjct: 484 GLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLF 543

Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDL 626
            E++      D  TF+ ++TA  +   +  GQ++   ++    E + Y T    + ++D+
Sbjct: 544 LELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYIT----NALLDM 599

Query: 627 YSRAGMLEKAMDIINRMPFAASATV--WRTVLAA 658
           Y++ G  E A    +    AAS  V  W +V+++
Sbjct: 600 YAKCGSPEDAHKAFDS---AASRDVVCWNSVISS 630



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 196/383 (51%), Gaps = 20/383 (5%)

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
           R  F  +++L A    L     +H Q++ +G++ D  +   LM  YS+ G M  A K+F 
Sbjct: 44  RREFARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFE 103

Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSP- 397
            M E +++V+W+ M+S    +G  + ++  F    R     PN +  S  + A   +   
Sbjct: 104 KMPE-RNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGS 162

Query: 398 -----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                FQ+ + ++K+ +++   VGT L++ Y+K+G +D A  VF+ + EK  V W+ M++
Sbjct: 163 GRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMIS 222

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
           G  ++G +  +++++ QL    V P+ +  S+V++AC+     +E GKQ HA  ++    
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSIL-PFLEGGKQIHAHILRYGHE 281

Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
               + + L+  Y K G + +A ++F     ++++SW +++ GY Q+   K+A+E+F  M
Sbjct: 282 KDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSM 341

Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS----CMVDLYS 628
            +  L+ D      ++T+C     ++ G Q     V+ + I   + + S     ++D+Y+
Sbjct: 342 PKFGLKPDMFACSSILTSCASLHALEFGTQ-----VHAYTIKANLGNDSYVTNSLIDMYA 396

Query: 629 RAGMLEKAMDIINRMPFAASATV 651
           +   L +A  + +   FAA   V
Sbjct: 397 KCDCLTEARKVFD--IFAADDVV 417



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 77/149 (51%), Gaps = 11/149 (7%)

Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-- 574
           +S+ L+ +YS+ G +  A +VF++  +R+LV+W++M+     HG  +++L VF +  R  
Sbjct: 81  LSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTR 140

Query: 575 --QDLEFDGITFIGVITACTHAG--LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
                E+   +FI   +    +G  +V + Q +      +  +Y      + ++D Y + 
Sbjct: 141 KNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVG----TLLIDFYLKE 196

Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC 659
           G ++ A  + + +P  ++ T W T+++ C
Sbjct: 197 GNIDYARLVFDALPEKSTVT-WTTMISGC 224


>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
 gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/486 (41%), Positives = 306/486 (62%), Gaps = 21/486 (4%)

Query: 373 MTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
           M   GV  N  TY  +L+        +    VH+ +     E    VGTAL+N Y K   
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS--EGVKPNEFTFSSVI 486
           ++EA   FE I   ++V+WSAMLA YAQ G    A+++YR++ S  +G+ PN  TF +++
Sbjct: 61  VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120

Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
           +AC+   A  E G++ HA   +   +  L V +ALV  Y + G++  A  VF   R+RD+
Sbjct: 121 DACSFLGALAE-GRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDV 179

Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
           +SW+SMI  +AQ G   +A+E++  M  +    D I FI V+ AC+++G+V+    +F  
Sbjct: 180 ISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRS 239

Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLIS--- 663
           +V +  + PT+EHY+CMVD+  RAG L  A D++  MPF     ++ T+L+AC+L +   
Sbjct: 240 IVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVE 299

Query: 664 -----------LQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVK 712
                      L P +S+ Y+ L+N+Y+A    ++ AR+RKLM +R +KK+ G SWIEV 
Sbjct: 300 RGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVL 359

Query: 713 NKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSE 772
           ++ + F+AGD  HPQ ++IY++++ L  ++K+AGY  DT  VLQD++++ KE +L  HSE
Sbjct: 360 DRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSE 419

Query: 773 RLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLC 832
           +LAIAFGL++TP GAPL+IVKNLRVC DCH   K+ISK+  R+I+VRDTNRFHHF +G+C
Sbjct: 420 KLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMC 479

Query: 833 SCGDYW 838
           SC DYW
Sbjct: 480 SCNDYW 485



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 162/352 (46%), Gaps = 13/352 (3%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
           M++ G++ N  T+ TVL      G +    +VH+ V   G EV   V  AL++MY K + 
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA--GAELTRSTFVSVI 287
           V +ARA F+ +   + ++W++M+A Y  N     A E +  MG A  G    R TF++++
Sbjct: 61  VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120

Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
             C+    L   R++H+ V + G D D  +   L+  Y +CG + DA  +F  MR  +DV
Sbjct: 121 DACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRR-RDV 179

Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIK- 406
           +SW++MIS   Q G +D A+  + +M  EG  P+   +  +L A       +      + 
Sbjct: 180 ISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRS 239

Query: 407 ----TNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAG---YAQIG 458
               T  E +      +++   + G L +A  +  L+      + +  ML+    Y  + 
Sbjct: 240 IVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVE 299

Query: 459 DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
             E A ++  +L  E   P   T +++ +A   P  A    K      IK K
Sbjct: 300 RGEAAAEVVFELDPENSSPY-ITLANIYSAAKRPKDAARIRKLMEERGIKKK 350



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 6/265 (2%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T+ S   T G L +   GR+VH     +G   DV V T+LV++Y +  +VE+ R  F+ +
Sbjct: 15  TVLSGFTTPGSLEE---GRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKI 71

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQV--EGIKPNSFTFSTVLGVLADEGIVAT 197
           +  NVVSW+++L+ YA+N      LEL+  M    +G+ PN  TF T+L   +  G +A 
Sbjct: 72  SRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAE 131

Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
             ++H  V + G +    VCNAL++ Y +   + DA+ VFDGM  RD I+W+SM++ +  
Sbjct: 132 GRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQ 191

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHN 316
                EA E ++ M   G       F+SV+  C+ +  +  +      ++ +  ++    
Sbjct: 192 RGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLE 251

Query: 317 IRTGLMVAYSKCGKMEDASKIFSMM 341
               ++    + GK+ DA  +  +M
Sbjct: 252 HYACMVDVLGRAGKLRDAEDLLRLM 276



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 2/166 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSVLKTCG 89
           ++ F++  + N V ++ +L  Y ++   + AL L+  +G  R G+     T  ++L  C 
Sbjct: 65  RAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACS 124

Query: 90  CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
            L     GR++H    + GF  D+ V  +LV+ Y R  ++ D + VFD M   +V+SW+S
Sbjct: 125 FLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSS 184

Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           ++S +A+    D  +EL+HRM  EG  P+   F +VL   ++ G+V
Sbjct: 185 MISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVV 230


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/689 (35%), Positives = 361/689 (52%), Gaps = 22/689 (3%)

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
           L S+L+TC        GRQ H + + +G   +  + T L+ +Y+      D + +F  + 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
                 W  ++ G+      D  L  + +M   G  P+ +TF  V+        VA    
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
           VH  +   G E+   V ++LI  Y ++  + DAR +FD M  +D + WN M+ GYV N  
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT- 319
              A   F  M          TF  V+ +CA+   +    QLH  V+ +G++ D  +   
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 320 -GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             L+  Y KC  +E A KIF   R   D+V  TAMISG++ NG  + A+  F  + +E +
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQ-RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 347

Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
           R N  T + +L A   ++      ++H HI+K  +  S  VG+A+++ Y K G LD A +
Sbjct: 348 RANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQ 407

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
            F  I +KD V W++M+   +Q G  E A+ ++RQ+   G K +  + S+ ++AC A   
Sbjct: 408 TFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC-ANLP 466

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
           A+  GK+ HA  ++    + L   SAL+ MYSK GN++ A  VF    +++ VSWNS+I 
Sbjct: 467 ALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIA 526

Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
            Y  HG  K +L +F  M    ++ D +TF+ +I+AC HAG VDEG  YF  M  E  I 
Sbjct: 527 AYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIM 586

Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
             MEHY+CMVDL+ RAG L +A  +IN MPF+  A VW T+L ACR              
Sbjct: 587 ARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRN 646

Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
           L  L P +S  YVLLSN++A  G W+   ++R LM +R V+K  G SWI+V N T+ F+A
Sbjct: 647 LFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVA 706

Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKP 749
            D SHPQS+QIY  L+ L   L+  GY P
Sbjct: 707 ADRSHPQSSQIYLLLKNLFLELRKEGYVP 735



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 250/498 (50%), Gaps = 18/498 (3%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K CG L     GR VH +    GF  DV V +SL+  Y     + D R +FD M
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
              + V W  +L+GY +N   D    +F  M+     PNS TF+ VL V A E ++    
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 200 QVHTMVIKNGGEVVTSVCN--ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
           Q+H +V+ +G E+ + V N  ALI +Y K + V  AR +FD     D +   +M++GYV 
Sbjct: 269 QLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVL 328

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
           N ++  A E F  +          T  SV+  CA    L L ++LH  +LKNG      +
Sbjct: 329 NGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYV 388

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
            + +M  Y+KCG+++ A + F  + + KD V W +MI+   QNG  + A++ F QM   G
Sbjct: 389 GSAIMDMYAKCGRLDLAHQTFIGISD-KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAG 447

Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
            + +  + S  L+A   +       ++HA +++  +       +AL++ Y K G LD A 
Sbjct: 448 TKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLAC 507

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
           +VF+ ++EK+ V+W++++A Y   G  + ++ ++  +  +G++P+  TF ++I+AC   +
Sbjct: 508 RVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISAC-GHA 566

Query: 494 AAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLV 547
             V++G  +  C      I A++ +  C    +V ++ + G +  A  +        D  
Sbjct: 567 GQVDEGIHYFRCMTEELGIMARMEHYAC----MVDLFGRAGRLNEAFGMINSMPFSPDAG 622

Query: 548 SWNSMICGYAQHGHTKKA 565
            W +++     HG+ + A
Sbjct: 623 VWGTLLGACRLHGNVELA 640



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 221/461 (47%), Gaps = 20/461 (4%)

Query: 26  FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
           FYS+       + LFDR P ++ V +N +L  Y ++     A  +F+ +RR        T
Sbjct: 191 FYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVT 250

Query: 81  LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTS--LVDLYMRTNNVEDGRRVFDD 138
            + VL  C       FG Q+H   V SG   D  V+ +  L+D+Y +  +VE  R++FD 
Sbjct: 251 FACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQ 310

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
               ++V  T+++SGY  N MN+  LE+F  +  E ++ NS T ++VL   A    +   
Sbjct: 311 RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLG 370

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
            ++H  ++KNG      V +A++ MY K   +  A   F G+ D+D++ WNSM+     N
Sbjct: 371 KELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQN 430

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               EA + F  MG+AG +    +  + +  CA    L   +++H+ +++     D    
Sbjct: 431 GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAE 490

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           + L+  YSKCG ++ A ++F  M E K+ VSW ++I+ +  +G +  ++N F  M  +G+
Sbjct: 491 SALIDMYSKCGNLDLACRVFDTMEE-KNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGI 549

Query: 379 RPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVG-----TALLNAYVKKGILDEAA 433
           +P+  T+  I++A           H  +   E+   +        +++ + + G L+EA 
Sbjct: 550 QPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEA- 608

Query: 434 KVFELID----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
             F +I+      D   W  +L      G+ E A    R L
Sbjct: 609 --FGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNL 647


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/581 (37%), Positives = 339/581 (58%), Gaps = 25/581 (4%)

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM--VAYSKCGKMEDAS 335
           L + + V+ IK C    +L+    + + +++  +  D  + + L+   A +  G +  A 
Sbjct: 5   LDQGSLVAAIKRCTRVGDLK---AIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAH 61

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           +IFS      ++  W  +I G+  + +   A+  +  M   G+ PN +T+  +L A   +
Sbjct: 62  RIFSCTHH-PNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKL 120

Query: 396 SPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
                  ++H+ I+K   +    +   L+  Y   G +D A  +F+ + E D  +WS M+
Sbjct: 121 LRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMV 180

Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
           +GYAQ G    A+K++R++ +E V  + FT +SV+  C     A++ GK  H+   K  +
Sbjct: 181 SGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVC-GDLGALDLGKWVHSYMDKEGV 239

Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
              + + +ALV MYSK G++++A +VF+   +RD+ +W++MI GYA HGH +KAL++F  
Sbjct: 240 KIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDA 299

Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
           M+R     + +TF  V++AC+H+GLV++G Q F+ M  E+ I P ++HY CMVDL+ RAG
Sbjct: 300 MKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAG 359

Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
           M+  A   I  MP   +  +WRT+L AC+              ++ L P     YVL+SN
Sbjct: 360 MVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSN 419

Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
           +YA+ G W    +VR LM D+  KK+ G+S IE+    + F+ GD SHP+  +IY  L +
Sbjct: 420 VYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQ 479

Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
           ++ +LK  G+   T  VL DID+E KE  L  HSERLAIA+GL+ TP G+P++IVKNLRV
Sbjct: 480 MARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRV 539

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           C DCH VIKLIS++  R+I+VRD  RFHHF+E  CSC DYW
Sbjct: 540 CRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 179/356 (50%), Gaps = 8/356 (2%)

Query: 227 SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
           S  V  A  +F      +   WN+++ GY  ++  + A   + +M L G      TF  V
Sbjct: 54  SGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFV 113

Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
           +K C     L   ++LHSQ++K G+DF+  +  GL+  Y+ CG M+ A  +F  M E  D
Sbjct: 114 LKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPE-PD 172

Query: 347 VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHA 402
             SW+ M+SG+ QNG    A+  F +M  E V  + FT + ++     +        VH+
Sbjct: 173 SASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHS 232

Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
           ++ K   +    +GTAL+  Y K G LD A KVF+ + E+D+ AWS M+AGYA  G  E 
Sbjct: 233 YMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEK 292

Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSAL 521
           A++++  +      PN  TF+SV++AC+  S  VE+G Q F     + K+   +     +
Sbjct: 293 ALQLFDAMKRSKTIPNCVTFTSVLSACSH-SGLVEKGHQIFETMWTEYKITPQIKHYGCM 351

Query: 522 VTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
           V ++ + G +  A +  +    + ++V W +++     HG+      + +++ + D
Sbjct: 352 VDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLD 407



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 180/375 (48%), Gaps = 14/375 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRT--NNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
           + +    V++   +D  +++ L++    T   +V    R+F   +  N+  W +++ GY+
Sbjct: 24  KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYS 83

Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS 215
            +      + L+  M + GI PNS+TF  VL        +    ++H+ ++K G +  T 
Sbjct: 84  ISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETP 143

Query: 216 VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
           + N LI +Y     +  A  +FD M + DS +W++MV+GY  N   +EA + F  M    
Sbjct: 144 LVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAEN 203

Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
                 T  SV+ +C     L L + +HS + K G+  D  + T L+  YSKCG +++A 
Sbjct: 204 VSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNAL 263

Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
           K+F  M E +DV +W+ MI+G+  +G  + A+  F  M R    PN  T++ +L+A    
Sbjct: 264 KVFQGMAE-RDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHS 322

Query: 396 SPFQVHAHIIKTNYEK-----SFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSA 449
              +    I +T + +            +++ + + G++  A K  + +  E ++V W  
Sbjct: 323 GLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRT 382

Query: 450 MLA-----GYAQIGD 459
           +L      GY  +G+
Sbjct: 383 LLGACKTHGYKDLGE 397



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 152/334 (45%), Gaps = 1/334 (0%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F  +   N   +N ++  Y        A+ L+  +   G+     T   VLK C  L  
Sbjct: 63  IFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLR 122

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
              G+++H + VK G   +  +   L+ LY     ++    +FD+M E +  SW++++SG
Sbjct: 123 LCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSG 182

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           YA+N      L+LF  MQ E +  ++FT ++V+GV  D G +     VH+ + K G ++ 
Sbjct: 183 YAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKID 242

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +  AL+ MY K   + +A  VF GM +RD   W++M+AGY  +    +A + F+ M  
Sbjct: 243 VVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKR 302

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKME 332
           +       TF SV+  C+ +  +    Q+   +             G MV  + + G + 
Sbjct: 303 SKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVG 362

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
            A K    M    +VV W  ++     +G  DL 
Sbjct: 363 HAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLG 396


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/719 (33%), Positives = 395/719 (54%), Gaps = 27/719 (3%)

Query: 54  CRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
           C+   ++EAL+ F    +   + L  ST  +++  C  +    +G+++H   +KS    D
Sbjct: 132 CKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPD 191

Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQV 172
           + +   ++++Y +  +++D R+ FD M   NVVSWT ++SGY++N   +  + ++ +M  
Sbjct: 192 LVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQ 251

Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
            G  P+  TF +++      G +    Q+H  VIK+G +      NALISMY +   +  
Sbjct: 252 SGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVH 311

Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCA 291
           A  VF  +  +D I+W SM+ G+      +EA   F +M   G  +     F SV   C 
Sbjct: 312 ASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACR 371

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
           +  E    RQ+H    K G+  +      L   Y+K G +  A + F  + E  D+VSW 
Sbjct: 372 SLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQI-ESPDLVSWN 430

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF------QVHAHII 405
           A+I+    +G ++ A+ FFCQM   G+ P+G T+  +L A    SP       Q+H++II
Sbjct: 431 AIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCA--CGSPVTINQGTQIHSYII 488

Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAV 464
           K   +K  +V  +LL  Y K   L +A  VF+ + E  ++V+W+A+L+   Q        
Sbjct: 489 KIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVF 548

Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTM 524
           ++++ +     KP+  T ++++  C A  A++E G Q H  S+K+ L   + VS+ L+ M
Sbjct: 549 RLFKLMLFSENKPDNITITTILGTC-AELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDM 607

Query: 525 YSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
           Y+K G+++ A +VF   +  D+VSW+S+I GYAQ G   +AL +F+ M+   ++ + +T+
Sbjct: 608 YAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTY 667

Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
           +GV++AC+H GLV+EG  +++ M  E  I PT EH SCMVDL +RAG L +A + I +M 
Sbjct: 668 LGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMG 727

Query: 645 FAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERAR 690
           F    T+W+T+LA+C+              ++ L P +SA  VLLSN++A+ G+W+E AR
Sbjct: 728 FNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVAR 787

Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKP 749
           +R LM    V+K  G SWI VK++ + F + D SH Q   IY+ LE+L  ++ D GY P
Sbjct: 788 LRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDP 846



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 256/556 (46%), Gaps = 10/556 (1%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  +  FD    RN V +  ++  Y ++    +A+ +++ + + G      T  S++K C
Sbjct: 209 KDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKAC 268

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
               D   GRQ+H   +KSG+   +    +L+ +Y R   +     VF  ++  +++SW 
Sbjct: 269 CIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWA 328

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           S+++G+ +       L LF  M  +G  +PN F F +V              Q+H M  K
Sbjct: 329 SMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAK 388

Query: 208 NG-GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
            G G  V + C +L  MY K   +  A   F  +E  D ++WN+++A +  +    EA  
Sbjct: 389 FGLGRNVFAGC-SLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIY 447

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
            F  M   G      TF+S++  C +   +    Q+HS ++K G+D +  +   L+  Y+
Sbjct: 448 FFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYT 507

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
           KC  + DA  +F  + E  ++VSW A++S  LQ+         F  M     +P+  T +
Sbjct: 508 KCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITIT 567

Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
            IL     ++      QVH   +K+      SV   L++ Y K G L  A  VF      
Sbjct: 568 TILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNP 627

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           DIV+WS+++ GYAQ G    A+ ++R + + GV+PNE T+  V++AC+     VE+G  F
Sbjct: 628 DIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSH-IGLVEEGWHF 686

Query: 503 H-ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
           +    I+  +       S +V + ++ G +  A    K+     D+  W +++     HG
Sbjct: 687 YNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHG 746

Query: 561 HTKKALEVFKEMRRQD 576
           +   A    + + + D
Sbjct: 747 NVDIAERAAENILKLD 762


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/581 (37%), Positives = 347/581 (59%), Gaps = 32/581 (5%)

Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++  C+  + L   +Q+H  V K G D    +   ++  YSKCG + +A+++F+ +  ++
Sbjct: 10  ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTL-PVR 68

Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVH 401
           +V+SW AMI+G+      + A+N F +M  +G  P+G+TYS  L A      A    Q+H
Sbjct: 69  NVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIH 128

Query: 402 AHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
           A +I+    Y    +V  AL++ YVK   + EA KVF+ I+EK +++WS ++ GYAQ  +
Sbjct: 129 AALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDN 188

Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN-ALCVS 518
            + A+ ++R+L     + + F  SS+I    A  A +EQGKQ HA +IK       + V+
Sbjct: 189 LKEAMDLFRELRESRHRMDGFVLSSII-GVFADFALLEQGKQMHAYTIKVPYGLLEMSVA 247

Query: 519 SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
           ++++ MY K G    A  +F+   +R++VSW  MI GY +HG   KA+E+F EM+   +E
Sbjct: 248 NSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIE 307

Query: 579 FDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMD 638
            D +T++ V++AC+H+GL+ EG++YF I+ +   I P +EHY+CMVDL  R G L++A +
Sbjct: 308 PDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKN 367

Query: 639 IINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGH 684
           +I +MP   +  +W+T+L+ CR              L+  + ++ A YV++SNMYA  G+
Sbjct: 368 LIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGY 427

Query: 685 WQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKD 744
           W+E  ++R+ +  + +KKEAG SW+E+  + + F  GD  HP   +I+  L+E+  R+K+
Sbjct: 428 WKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVKE 487

Query: 745 A-GYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ------IVKNLRV 797
             GY    ++ L D+++E K   L  HSE+LAI  GLV    G  L+      I KNLRV
Sbjct: 488 EMGYVHSINFSLHDVEEESKMESLRVHSEKLAI--GLVLVRRGLKLKGERVIRIFKNLRV 545

Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           CGDCH  IK +SK+ +   VVRD NRFH F+ GLCSCGDYW
Sbjct: 546 CGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 244/514 (47%), Gaps = 55/514 (10%)

Query: 81  LSSVLKTCGC--LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDD 138
           L+ +L  C    L D   G+QVH    K GF     V  S++D+Y +   V +  RVF+ 
Sbjct: 7   LNKILNKCSKRRLLDQ--GKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNT 64

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           +   NV+SW ++++GY   +  +  L LF  M+ +G  P+ +T+S+ L   +        
Sbjct: 65  LPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEG 124

Query: 199 VQVHTMVIKNGGEVV--TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
           +Q+H  +I++G   +  ++V  AL+ +Y+K + + +AR VFD +E++  ++W++++ GY 
Sbjct: 125 MQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYA 184

Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLK--NGIDFD 314
             +   EA + F  +  +   +      S+I + A    L   +Q+H+  +K   G+  +
Sbjct: 185 QEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL-LE 243

Query: 315 HNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT 374
            ++   ++  Y KCG   +A  +F  M E ++VVSWT MI+G+ ++G  + AV  F +M 
Sbjct: 244 MSVANSVLDMYMKCGLTVEADALFREMLE-RNVVSWTVMITGYGKHGIGNKAVELFNEMQ 302

Query: 375 REGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
             G+ P+  TY  +L+A         H+ +IK   +K FS+  +  N  +K         
Sbjct: 303 ENGIEPDSVTYLAVLSACS-------HSGLIKEG-KKYFSILCS--NQKIK--------- 343

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
                    +  ++ M+    + G  + A  +  ++    +KPN   + ++++ C     
Sbjct: 344 -------PKVEHYACMVDLLGRGGRLKEAKNLIEKMP---LKPNVGIWQTLLSVCRM-HG 392

Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVT-MYSKKG---NIESASEVFKRQ--RKRDLVS 548
            VE GKQ     ++ + NN    +  +V+ MY+  G     E   E  KR+  +K    S
Sbjct: 393 DVEMGKQVGEILLRREGNNP--ANYVMVSNMYAHAGYWKESEKIRETLKRKGLKKEAGRS 450

Query: 549 WNSM-------ICGYAQHGHTKKALEVFKEMRRQ 575
           W  M         G   H   ++  EV KEM ++
Sbjct: 451 WVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKR 484



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 178/356 (50%), Gaps = 5/356 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+  P RN + +N ++  Y  +   +EALNLF  +R  G    G T SS LK C C   
Sbjct: 61  VFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADA 120

Query: 94  HVFGRQVHCECVKSGFA--RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
              G Q+H   ++ GF       V+ +LVDLY++   + + R+VFD + E +V+SW++L+
Sbjct: 121 AGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLI 180

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-G 210
            GYA+       ++LF  ++    + + F  S+++GV AD  ++    Q+H   IK   G
Sbjct: 181 LGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYG 240

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
            +  SV N+++ MY+K  +  +A A+F  M +R+ ++W  M+ GY  + +  +A E FN 
Sbjct: 241 LLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNE 300

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCG 329
           M   G E    T+++V+  C+ +  ++  ++  S +  N            MV    + G
Sbjct: 301 MQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGG 360

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF-CQMTREGVRPNGFT 384
           ++++A  +   M    +V  W  ++S    +G +++        + REG  P  + 
Sbjct: 361 RLKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYV 416



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 103/181 (56%), Gaps = 7/181 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FDR  +++ + ++ L+  Y ++   +EA++LF  +R     + G  LSS++   G  
Sbjct: 162 RKVFDRIEEKSVMSWSTLILGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSII---GVF 218

Query: 92  FDHVF---GRQVHCECVKSGFA-RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
            D      G+Q+H   +K  +   +++V+ S++D+YM+     +   +F +M E NVVSW
Sbjct: 219 ADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSW 278

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
           T +++GY ++ + ++ +ELF+ MQ  GI+P+S T+  VL   +  G++    +  +++  
Sbjct: 279 TVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCS 338

Query: 208 N 208
           N
Sbjct: 339 N 339


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/685 (34%), Positives = 367/685 (53%), Gaps = 27/685 (3%)

Query: 179 SFTFSTVLGVLADEGIVATAVQ----VHTMVIKN-GGEVVTSVCNALISMYLKSKMVRDA 233
           S   +  LG+L    I A++++    VH  ++K         + N LI+MY K      A
Sbjct: 2   SLLSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESA 61

Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
           R V      R+ ++W S+++G   N     A   F  M   G      TF    K  A+ 
Sbjct: 62  RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL 121

Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
           +     +Q+H+  +K G   D  +       Y K    +DA K+F  + E +++ +W A 
Sbjct: 122 RLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE-RNLETWNAF 180

Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
           IS  + +G    A+  F +  R    PN  T+   L A           Q+H  ++++ +
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240

Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
           +   SV   L++ Y K   +  +  +F  +  K+ V+W +++A Y Q  + E A  +Y +
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300

Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKG 529
              + V+ ++F  SSV++AC A  A +E G+  HA ++KA +   + V SALV MY K G
Sbjct: 301 SRKDIVETSDFMISSVLSAC-AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359

Query: 530 NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM--RRQDLEFDGITFIGV 587
            IE + + F    +++LV+ NS+I GYA  G    AL +F+EM  R      + +TF+ +
Sbjct: 360 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419

Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
           ++AC+ AG V+ G + FD M + + I P  EHYSC+VD+  RAGM+E+A + I +MP   
Sbjct: 420 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 479

Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
           + +VW  +  ACR              L  L P DS  +VLLSN +AA G W E   VR+
Sbjct: 480 TISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVRE 539

Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
            +    +KK AGYSWI VKN+ ++F A D SH  + +I + L +L   ++ AGYKPD   
Sbjct: 540 ELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKL 599

Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
            L D+++E K A +S HSE+LA+AFGL++ P   P++I KNLR+CGDCH+  K +S   +
Sbjct: 600 SLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVK 659

Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
           R+I+VRD NRFH FK+G+CSC DYW
Sbjct: 660 REIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 248/495 (50%), Gaps = 11/495 (2%)

Query: 96  FGRQVHCECVKS-GFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
            GR VH   VK+        ++  L+++Y + ++ E  R V       NVVSWTSL+SG 
Sbjct: 24  LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83

Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
           A+N      L  F  M+ EG+ PN FTF      +A   +  T  Q+H + +K G  +  
Sbjct: 84  AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143

Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
            V  +   MY K+++  DAR +FD + +R+  TWN+ ++  VT+    EA E F      
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
                  TF + +  C+    L L  QLH  VL++G D D ++  GL+  Y KC ++  +
Sbjct: 204 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS 263

Query: 335 SKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA 394
             IF+ M   K+ VSW ++++ ++QN   + A   + +  ++ V  + F  S +L+A   
Sbjct: 264 EIIFTEM-GTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322

Query: 395 VSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
           ++  +    +HAH +K   E++  VG+AL++ Y K G ++++ + F+ + EK++V  +++
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382

Query: 451 LAGYAQIGDTEGAVKIYRQLTSEGV--KPNEFTFSSVINACTAPSAAVEQG-KQFHACSI 507
           + GYA  G  + A+ ++ ++   G    PN  TF S+++AC+  + AVE G K F +   
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR-AGAVENGMKIFDSMRS 441

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKAL 566
              +       S +V M  + G +E A E  K+   +  +S W ++      HG  +  L
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501

Query: 567 EVFKEMRRQDLEFDG 581
              + + + D +  G
Sbjct: 502 LAAENLFKLDPKDSG 516



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 187/402 (46%), Gaps = 12/402 (2%)

Query: 1   MTLSPALKSLINPQTKQPPKSLRSPF----YSKKDQSLFDR-----SPQRNFVEYNRLLF 51
           M L   + + I      PP    + +    YSK D     R     +P RN V +  L+ 
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81

Query: 52  EYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR 111
              ++     AL  F  +RR G+     T     K    L   V G+Q+H   VK G   
Sbjct: 82  GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           DV V  S  D+Y +T   +D R++FD++ E N+ +W + +S    +      +E F   +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVR 231
                PNS TF   L   +D   +   +Q+H +V+++G +   SVCN LI  Y K K +R
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261

Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
            +  +F  M  +++++W S+VA YV N    +A   +        E +     SV+  CA
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321

Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
               L L R +H+  +K  ++    + + L+  Y KCG +ED+ + F  M E K++V+  
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE-KNLVTRN 380

Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGV--RPNGFTYSIILTA 391
           ++I G+   G +D+A+  F +M   G    PN  T+  +L+A
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 147/339 (43%), Gaps = 3/339 (0%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+RN   +N  +     D   +EA+  F+  RR+       T  + L  C   
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G Q+H   ++SGF  DV+V   L+D Y +   +     +F +M   N VSW SL+
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           + Y +N  +++   L+ R + + ++ + F  S+VL   A    +     +H   +K   E
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
               V +AL+ MY K   + D+   FD M +++ +T NS++ GY        A   F  M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402

Query: 272 GLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKC 328
              G   T +  TFVS++  C+    +    ++   +    GI+      + ++    + 
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
           G +E A +    M     +  W A+ +    +G   L +
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 230/670 (34%), Positives = 367/670 (54%), Gaps = 60/670 (8%)

Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
           L+  +L ++ + +ARA+FD +       +  M+  Y  N    EA + F  +        
Sbjct: 61  LLFHHLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDV--- 117

Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
             ++ S+IK C    ++  AR+L  ++ +  +     +  GL+    + G +++A  +F 
Sbjct: 118 -VSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLL----RLGIVQEAETLFW 172

Query: 340 MMREM-KDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE----------GVRPNGFTYSII 388
            M  M +DV +W AMI G+  NG +D A+  FCQM             G+  NG +   +
Sbjct: 173 AMEPMDRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQAL 232

Query: 389 LTAQPAVSP-------------------------FQVHAHIIKT-NYEKSFSVGTALLNA 422
           +  +  V+                           Q+H  + K  ++     V  +L+  
Sbjct: 233 VLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTF 292

Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
           Y     ++ A +VF  +  K +V W+A+L GY        A++++ ++    V PNE +F
Sbjct: 293 YAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSF 352

Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
           +S +N+C      +E+GK  HA ++K  L +   V  +LV MYSK G +  A  VFK   
Sbjct: 353 TSALNSCCGLED-IERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGIN 411

Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
           ++++VSWNS+I G AQHG    AL +F +M R+ ++ DGIT  G+++AC+H+G++ + + 
Sbjct: 412 EKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARC 471

Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-- 660
           +F     +  +  T+EHY+ MVD+  R G LE+A  ++  MP  A++ VW  +L+ACR  
Sbjct: 472 FFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKH 531

Query: 661 ------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSW 708
                       +  ++P  SA YVLLSN+YA++  W E A +R+ M    V K+ G SW
Sbjct: 532 SNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSW 591

Query: 709 IEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILS 768
           + +K + + FL+ D SHP + +IY KLE L  +LK+ GY PD  + L D++ E KE +LS
Sbjct: 592 LTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLS 651

Query: 769 QHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFK 828
            HSERLAIAFGL++T  G+ + ++KNLRVCGDCH  IKL++K+  R+IVVRD++RFH FK
Sbjct: 652 YHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFK 711

Query: 829 EGLCSCGDYW 838
            G+CSCGDYW
Sbjct: 712 NGICSCGDYW 721



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 224/494 (45%), Gaps = 42/494 (8%)

Query: 122 LYMRTNN--VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI---- 175
           L+   NN  +++ R +FD +   +V  +T +L  YA+N      ++LF R+  + +    
Sbjct: 62  LFHHLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWN 121

Query: 176 -----------------------KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
                                  +    +++T++  L   GIV  A  +   +     +V
Sbjct: 122 SIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDV 181

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             +  NA+I  Y  +  V DA  +F  M  RD I+W+SM+AG   N    +A   F +M 
Sbjct: 182 --AAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMV 239

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGKM 331
            +G  L+    V  +   A     R+  Q+H  V K G   FD  +   L+  Y+ C +M
Sbjct: 240 ASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQM 299

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           E A ++F  +   K VV WTA+++G+  N     A+  F +M R  V PN  +++  L +
Sbjct: 300 EAACRVFGEV-VYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNS 358

Query: 392 QPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
              +   +    +HA  +K   E    VG +L+  Y K G + +A  VF+ I+EK++V+W
Sbjct: 359 CCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSW 418

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
           ++++ G AQ G    A+ ++ Q+  EGV P+  T + +++AC+      +    F     
Sbjct: 419 NSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQ 478

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
           K  +   +   +++V +  + G +E A   V     K + + W +++    +H +    L
Sbjct: 479 KRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSN----L 534

Query: 567 EVFKEMRRQDLEFD 580
           ++ K    Q  E +
Sbjct: 535 DLAKRAANQIFEIE 548



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 191/434 (44%), Gaps = 55/434 (12%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+R  V +  L+    R  + QEA  LF  +  +                   
Sbjct: 137 RKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMD------------------ 178

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                              RDV    +++  Y     V+D  ++F  M   +V+SW+S++
Sbjct: 179 -------------------RDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMI 219

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG-- 209
           +G   N  +++ L LF  M   G+  +S      L   A        +Q+H  V K G  
Sbjct: 220 AGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDW 279

Query: 210 --GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
              E V++   +L++ Y   K +  A  VF  +  +  + W +++ GY  N+ H EA E 
Sbjct: 280 HFDEFVSA---SLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEV 336

Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
           F  M         S+F S +  C   +++   + +H+  +K G++    +   L+V YSK
Sbjct: 337 FGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSK 396

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
           CG + DA  +F  + E K+VVSW ++I G  Q+G    A+  F QM REGV P+G T + 
Sbjct: 397 CGYVSDAVYVFKGINE-KNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTG 455

Query: 388 ILTA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA-AKVFELI 439
           +L+A       Q A   F+      K +   +    T++++   + G L+EA A V  + 
Sbjct: 456 LLSACSHSGMLQKARCFFRYFGQ--KRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMP 513

Query: 440 DEKDIVAWSAMLAG 453
            + + + W A+L+ 
Sbjct: 514 MKANSMVWLALLSA 527



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 154/337 (45%), Gaps = 6/337 (1%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           LF + P R+ + ++ ++     +   ++AL LF  +   G+ L    L   L     +  
Sbjct: 203 LFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPA 262

Query: 94  HVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
              G Q+HC   K G +  D  VS SLV  Y     +E   RVF ++   +VV WT+LL+
Sbjct: 263 WRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLT 322

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
           GY  N  +   LE+F  M    + PN  +F++ L        +     +H   +K G E 
Sbjct: 323 GYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLES 382

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
              V  +L+ MY K   V DA  VF G+ +++ ++WNS++ G   +   M A   FN M 
Sbjct: 383 GGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQML 442

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLAR---QLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
             G +    T   ++  C+ +  L+ AR   +   Q     +  +H   T ++    +CG
Sbjct: 443 REGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEH--YTSMVDVLGRCG 500

Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           ++E+A  +   M    + + W A++S   ++  +DLA
Sbjct: 501 ELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLA 537


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/571 (39%), Positives = 334/571 (58%), Gaps = 53/571 (9%)

Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
           C+T  EL+   Q HSQ+++ G+  D++                           M  V+ 
Sbjct: 30  CSTMAELK---QYHSQIIRLGLSADND--------------------------AMGRVIK 60

Query: 350 WTAMI-SGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHI 404
           + A+  SG+L+       +  + +M  + V PN FTY  ++ A           Q+HAH+
Sbjct: 61  FCAISKSGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHV 120

Query: 405 IKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD--IVAWSAMLAGYAQIGDTE 461
           +K  +    FS+   L++ YV    L++A +VF+ + ++D   V+W+AM+A Y Q     
Sbjct: 121 LKFGFGADGFSLNN-LIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLH 179

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A  ++ ++  E V  ++F  +S+++ACT    A+EQGK  H    K+ +     +++ +
Sbjct: 180 EAFALFDRMRLENVVLDKFVAASMLSACTG-LGALEQGKWIHGYIEKSGIELDSKLATTV 238

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           + MY K G +E ASEVF    ++ + SWN MI G A HG  + A+E+FKEM R+ +  DG
Sbjct: 239 IDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDG 298

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           ITF+ V++AC H+GLV+EG+ YF  M     + P MEH+ CMVDL  RAG+LE+A  +IN
Sbjct: 299 ITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLIN 358

Query: 642 RMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQE 687
            MP    A V   ++ ACR+              I L+PH+S  YVLL+N+YA+ G W++
Sbjct: 359 EMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWED 418

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
            A+VRKLMNDR VKK  G+S IE ++    F+AG  +HPQ+ +IY+KL+E+   ++  GY
Sbjct: 419 VAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGY 478

Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
            PDT  VL DID+E KE  L  HSE+LAIAFGL+ T  G  L+I KNLR+C DCH   KL
Sbjct: 479 VPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKL 538

Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ISK+  R+I++RD NRFHHF+ G CSC DYW
Sbjct: 539 ISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 162/331 (48%), Gaps = 17/331 (5%)

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           SGY R ++    + ++ RM  + + PN FT+  ++     +  +    Q+H  V+K G  
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGM--EDRDSITWNSMVAGYV-TNELHMEAFETF 268
                 N LI MY+  + +  AR VFD M   DR+S++WN+M+A YV +N LH EAF  F
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLH-EAFALF 185

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
           + M L    L +    S++  C     L   + +H  + K+GI+ D  + T ++  Y KC
Sbjct: 186 DRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKC 245

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G +E AS++F+ + + K + SW  MI G   +G  + A+  F +M RE V P+G T+  +
Sbjct: 246 GCLEKASEVFNELPQ-KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNV 304

Query: 389 LTAQPAVSPFQVHAHIIKTNYE--------KSFSVGTALLNAYVKKGILDEAAKVF-ELI 439
           L+A       +   H  +   E        + F     LL    + G+L+EA K+  E+ 
Sbjct: 305 LSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLG---RAGLLEEARKLINEMP 361

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
              D     A++      G+TE   +I +++
Sbjct: 362 VNPDAGVLGALVGACRIHGNTELGEQIGKKV 392



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 11/285 (3%)

Query: 90  CLFDHVF--GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM--NESNVV 145
           C  D+    G+Q+H   +K GF  D     +L+ +Y+   ++E  RRVFD+M   + N V
Sbjct: 104 CCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSV 163

Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           SW ++++ Y ++        LF RM++E +  + F  +++L      G +     +H  +
Sbjct: 164 SWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYI 223

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
            K+G E+ + +   +I MY K   +  A  VF+ +  +   +WN M+ G   +     A 
Sbjct: 224 EKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAI 283

Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATT---KELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           E F  M          TFV+V+  CA +   +E +   Q  ++VL      +H    G M
Sbjct: 284 ELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEH---FGCM 340

Query: 323 V-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           V    + G +E+A K+ + M    D     A++     +G  +L 
Sbjct: 341 VDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELG 385



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 2/169 (1%)

Query: 29  KKDQSLFDRSPQR--NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           ++ + +FD  PQR  N V +N ++  Y + +   EA  LF  +R   + L     +S+L 
Sbjct: 146 EQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLS 205

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C  L     G+ +H    KSG   D  ++T+++D+Y +   +E    VF+++ +  + S
Sbjct: 206 ACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISS 265

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIV 195
           W  ++ G A +   +  +ELF  M+ E + P+  TF  VL   A  G+V
Sbjct: 266 WNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLV 314


>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/565 (39%), Positives = 337/565 (59%), Gaps = 21/565 (3%)

Query: 282 TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM 341
           T+  VIK C  +        +H+ V+K+G + D  I   L+  Y+    +  A ++FS+ 
Sbjct: 2   TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61

Query: 342 REMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVH 401
            + +DVVSW AMI G+++ G +      F +M    V     +++ I+     V      
Sbjct: 62  SD-RDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV----ISWNTIINGYAIVGKIDEA 116

Query: 402 AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTE 461
             +     E++     ++L+ +VK G ++EA  +F  +  +D+V+W++MLA YAQ G   
Sbjct: 117 KRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPN 176

Query: 462 GAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSAL 521
            A+ ++ Q+ + GVKP E T  S+++AC A   A+++G   H      ++     V +AL
Sbjct: 177 EALALFDQMRAVGVKPTEATVVSLLSAC-AHLGALDKGLHLHTYINDNRIEVNSIVGTAL 235

Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
           V MY+K G I  A++VF     +D+++WN++I G A HGH K+A ++FKEM+   +E + 
Sbjct: 236 VDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPND 295

Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
           ITF+ +++AC+HAG+VDEGQ+  D M + + I P +EHY C++DL +RAG+LE+AM++I 
Sbjct: 296 ITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIG 355

Query: 642 RMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQE 687
            MP   + +    +L  C              RLI+LQP  S  Y+LLSN+YAA   W +
Sbjct: 356 TMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDD 415

Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA-G 746
             +VR LM    + K  G S IE+K   + F+AGD SHP+SN+IY KL E+ TRLK A G
Sbjct: 416 ARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIG 475

Query: 747 YKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIK 806
           Y  DT  VL D+++E KE  L+ HSE+LAIA+GL+   +   ++IVKNLRVC DCH V K
Sbjct: 476 YSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTK 535

Query: 807 LISKLERRDIVVRDTNRFHHFKEGL 831
           LISK+  R+I+VRD NRFHHF++G 
Sbjct: 536 LISKVYGREIIVRDRNRFHHFEDGF 560



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 193/400 (48%), Gaps = 17/400 (4%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           T   V+K C       FG  VH   VKSGF  D  +  SL+ LY    ++   +++F   
Sbjct: 2   TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
           ++ +VVSW +++ GY +         +F RM    +     +++T++   A  G +  A 
Sbjct: 62  SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDV----ISWNTIINGYAIVGKIDEAK 117

Query: 200 QV-HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
           ++   M  +N   +V+   N+++S ++K   V +A  +F  M  RD ++WNSM+A Y   
Sbjct: 118 RLFDEMPERN---LVS--WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQC 172

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               EA   F+ M   G + T +T VS++  CA    L     LH+ +  N I+ +  + 
Sbjct: 173 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 232

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
           T L+  Y+KCGK+  A+++F+ M E KDV++W  +I+G   +G +  A   F +M    V
Sbjct: 233 TALVDMYAKCGKISLATQVFNAM-ESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASV 291

Query: 379 RPNGFTYSIILTA---QPAVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAA 433
            PN  T+  +L+A      V   Q     + ++Y  E        +++   + G+L+EA 
Sbjct: 292 EPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAM 351

Query: 434 KVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
           ++   +  E +  A  A+L G    G+ E    + ++L +
Sbjct: 352 ELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLIN 391



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 31/195 (15%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEY-----------------CRDSLH--------------Q 60
           + LFD  P+RN V +N +L  +                 CRD +                
Sbjct: 117 KRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPN 176

Query: 61  EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLV 120
           EAL LF  +R +G+    +T+ S+L  C  L     G  +H     +    +  V T+LV
Sbjct: 177 EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALV 236

Query: 121 DLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
           D+Y +   +    +VF+ M   +V++W ++++G A +       +LF  M+   ++PN  
Sbjct: 237 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDI 296

Query: 181 TFSTVLGVLADEGIV 195
           TF  +L   +  G+V
Sbjct: 297 TFVAMLSACSHAGMV 311


>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 686

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/682 (34%), Positives = 381/682 (55%), Gaps = 37/682 (5%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL   LK C    D   G Q+H      GF   V VS +++ +Y +    ++   +F+++
Sbjct: 5   TLCLALKACRG--DLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENL 62

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
            + +VVSW ++LSG+  N++    L    RM+  G+  ++FT+ST L            +
Sbjct: 63  VDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGL 119

Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT-N 258
           Q+ + V+K+G E    V N+ I+MY +S   R AR VFD M  +D I+WNS+++G     
Sbjct: 120 QLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEG 179

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
               EA   F +M   G EL   +F SVI  C    +L+LARQ+H   +K G +    + 
Sbjct: 180 TFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 239

Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
             LM  YSKCG +E    +F  M E ++VVSWT MIS +      D AV+ F  M  +GV
Sbjct: 240 NILMSRYSKCGVLEAVKSVFYQMSE-RNVVSWTTMISSNR-----DDAVSIFLNMRLDGV 293

Query: 379 RPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
            PN  T+  +L A    +      ++H   IKT +    SVG + +  Y K   L++A K
Sbjct: 294 YPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKK 353

Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-APS 493
            F+ I  ++I++W+AM++G+AQ G +  A+K++   T+E + PNE+TF SV+NA   A  
Sbjct: 354 AFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETM-PNEYTFGSVLNAIAFAED 412

Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
            +V+ G++ HA  +K  LN+   VSSAL+ MY+K+GNI  + +VF    +R+   W S+I
Sbjct: 413 ISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSII 472

Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
             Y+ HG     + +F EM ++++  D +TF+ V+TAC   G+VD+G +  ++M+ ++++
Sbjct: 473 SAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNL 532

Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL------------ 661
            P+ EHYSCMVD+  RAG L++A ++++ +P     ++ +++L +CRL            
Sbjct: 533 EPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAE 592

Query: 662 --ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS-- 717
             + ++P  S  YV + N+YA    W + A +RK M  + V KEAG+SWI+V +   S  
Sbjct: 593 LAMEMKPELSGSYVQMYNIYAEKEQWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLT 652

Query: 718 ---FLAGDISHPQSNQIYSKLE 736
              F +GD SHP+S++IY  +E
Sbjct: 653 MQGFSSGDKSHPKSDEIYRMVE 674



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 195/363 (53%), Gaps = 14/363 (3%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRD-SLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
           +FD  P ++ + +N LL    ++ +   EA+ +F  + R G+ L   + +SV+ TC    
Sbjct: 156 VFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHET 215

Query: 93  DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
           D    RQ+H  C+K G+   + V   L+  Y +   +E  + VF  M+E NVVSWT+++S
Sbjct: 216 DLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMIS 275

Query: 153 GYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
               N+  D  + +F  M+++G+ PN  TF  +L  +     +   +++H + IK G   
Sbjct: 276 ---SNR--DDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVS 330

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
             SV N+ I+MY K + + DA+  FD +  R+ I+WN+M++G+  N    EA + F +  
Sbjct: 331 EPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLS-- 388

Query: 273 LAGAEL--TRSTFVSVIKLCATTKELRL--ARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
            A AE      TF SV+   A  +++ +   ++ H+ +LK G++    + + L+  Y+K 
Sbjct: 389 -ATAETMPNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKR 447

Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
           G + ++ K+F+ M +    V WT++IS +  +G  +  +N F +M +E V P+  T+  +
Sbjct: 448 GNINESEKVFNEMSQRNQFV-WTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSV 506

Query: 389 LTA 391
           LTA
Sbjct: 507 LTA 509



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 153/311 (49%), Gaps = 9/311 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F +  +RN V +  ++      S   +A+++FL +R  G+     T   +L    C 
Sbjct: 256 KSVFYQMSERNVVSWTTMI-----SSNRDDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCN 310

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G ++H  C+K+GF  + +V  S + +Y +   +ED ++ FDD+    ++SW +++
Sbjct: 311 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMI 370

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL--ADEGIVATAVQVHTMVIKNG 209
           SG+A+N  +   L++F     E + PN +TF +VL  +  A++  V    + H  ++K G
Sbjct: 371 SGFAQNGFSHEALKMFLSATAETM-PNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLG 429

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V +AL+ MY K   + ++  VF+ M  R+   W S+++ Y ++         F+
Sbjct: 430 LNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFH 489

Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSKC 328
            M          TF+SV+  C     +    ++ + ++++  ++  H   + ++    + 
Sbjct: 490 EMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHEHYSCMVDMLGRA 549

Query: 329 GKMEDASKIFS 339
           G++++A ++ S
Sbjct: 550 GRLKEAEELMS 560


>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
 gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/597 (36%), Positives = 352/597 (58%), Gaps = 24/597 (4%)

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
             T NN+  +     R+   + + L      L    Q+H+ +LK G+  +  + T     
Sbjct: 11  LRTINNVLASSTPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASI 70

Query: 325 YSKCGKME-DASKIFSMMREMK--DVVSWTAMISGHLQNG-AIDLAVNFFCQMTREGVRP 380
            S     +  AS +FS   + +  D   +  +I  + Q G + D A+  +  M  + + P
Sbjct: 71  SSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILP 130

Query: 381 NGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAY-VKKGILDEAAKV 435
           N FTY  +L A   +        VH  ++K  ++    V   +++ Y    G ++ A KV
Sbjct: 131 NKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKV 190

Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
           F+ + + D V WSAM+ GYA++G +  AV ++R++    V P+E T  S+++ACT    A
Sbjct: 191 FDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACT-DLGA 249

Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
           +E GK   A   + +++  + VS+AL+ M++K G+I  A ++F+   ++ +VSW S+I G
Sbjct: 250 LELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVG 309

Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
            A HG  ++A  +F+EM    +  D + FIG+++AC+H+GLV+ G++YF  M+ ++ + P
Sbjct: 310 MAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVP 369

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------L 661
            +EHY CMVD+Y R G++++A++ +  MP   +  + RT+++ACR              L
Sbjct: 370 KIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLL 429

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           +  +P   + YVLLSN+YA T  W+++ ++R++M  + +KK  G + IE+ N+ Y F+AG
Sbjct: 430 MKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAG 489

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D SH Q  +IY  ++E+   +K +GY+P TS VL DI++E KE  L++HSE+LAIAFGL+
Sbjct: 490 DKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLL 549

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            TP G P++IVKNLRVC DCH+  K ISK+  R+I++RD NRFHHFK G CSCGD+W
Sbjct: 550 RTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 158/345 (45%), Gaps = 32/345 (9%)

Query: 147 WTSLLSGYARNKMN-DRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           + +L+  YA+   + D+ L L+  M  + I PN FT+  VL   A   ++     VH  V
Sbjct: 99  FNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSV 158

Query: 206 IKNGGEVVTSVCNALISMY-LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
           +K G +    V N ++ MY   +  +  AR VFD M   DS+TW++M+ GY       EA
Sbjct: 159 VKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEA 218

Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
              F  M +A       T VS++  C     L L + + + + ++ I     +   L+  
Sbjct: 219 VALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDM 278

Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
           ++KCG +  A K+F  M E K +VSWT++I G   +G    A   F +MT  GV P+   
Sbjct: 279 FAKCGDISKALKLFRAMNE-KTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVA 337

Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
           +  +L+A         H+ +++         G     + +KK         ++L+ +  I
Sbjct: 338 FIGLLSACS-------HSGLVER--------GREYFGSMMKK---------YKLVPK--I 371

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
             +  M+  Y + G  + A++  R +    ++PN     ++++AC
Sbjct: 372 EHYGCMVDMYCRTGLVKEALEFVRNMP---IEPNPVILRTLVSAC 413



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 11/254 (4%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY-MRTNNVEDGRRVFDD 138
           T   VLK C  L     G+ VH   VK GF  D++V  ++V +Y      +   R+VFD+
Sbjct: 134 TYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDE 193

Query: 139 MNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
           M +S+ V+W++++ GYAR   +   + LF  MQ+  + P+  T  ++L    D G +   
Sbjct: 194 MPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELG 253

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
             +   + ++       V NALI M+ K   +  A  +F  M ++  ++W S++ G   +
Sbjct: 254 KWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMH 313

Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN--------- 309
               EA   F  M  +G       F+ ++  C+ +  +   R+    ++K          
Sbjct: 314 GRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEH 373

Query: 310 -GIDFDHNIRTGLM 322
            G   D   RTGL+
Sbjct: 374 YGCMVDMYCRTGLV 387



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 96/204 (47%), Gaps = 3/204 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P+ + V ++ ++  Y R     EA+ LF  ++   +     T+ S+L  C  L
Sbjct: 188 RKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDL 247

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ +     +    + V VS +L+D++ +  ++    ++F  MNE  +VSWTS++
Sbjct: 248 GALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVI 307

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A +        LF  M   G+ P+   F  +L   +  G+V    +    ++K   +
Sbjct: 308 VGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKK-YK 366

Query: 212 VVTSV--CNALISMYLKSKMVRDA 233
           +V  +     ++ MY ++ +V++A
Sbjct: 367 LVPKIEHYGCMVDMYCRTGLVKEA 390


>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
          Length = 633

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/622 (37%), Positives = 342/622 (54%), Gaps = 65/622 (10%)

Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDA 334
           G  LT     +++  CA+      A ++H+  ++  +D D  +   L  AY+  G+++ A
Sbjct: 19  GGALTADRAAALLAGCASASR---AAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLA 75

Query: 335 SKIFSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQM--TREGVRPNGFTYSIILT 390
               +++R   D   V +T+ I  H   G    A+    +M  +R G+ P   T S  L 
Sbjct: 76  ---VALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLP 132

Query: 391 AQPAVSPFQ-VHAHIIKTNYEKSFSVGTALL----------------------------- 420
           A   ++  + +H + +K        V TALL                             
Sbjct: 133 ACGCLAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVT 192

Query: 421 ---NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
              + Y K G LD+A  +F+ +  KD+V W+AM+ GY Q G    A++++RQ+   GV+P
Sbjct: 193 AMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEP 252

Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHA----CSIKAKLNNALCVSSALVTMYSKKGNIES 533
           +E +    ++A  A     E G+  H+       +A++     V +ALV MY K G++E 
Sbjct: 253 DEVSVVLALSA-VAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEE 311

Query: 534 ASEVFKR---QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITA 590
           A  VF+       RD+V+WN+MI GYA HG +++ALE F ++R Q L    ITFIGV+ A
Sbjct: 312 AVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNA 371

Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
           C+H+GLVDEG+  F  M  E+ I P +EHY CMVDL  RAG +E+A D++  M     A 
Sbjct: 372 CSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAA 431

Query: 651 VWRTVLAACRL---ISLQPH-----------DSAIYVLLSNMYAATGHWQERARVRKLMN 696
           +W ++L ACRL   ++L              +S  YVLLSNMYAA G W+E  RVR +M 
Sbjct: 432 MWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMR 491

Query: 697 DRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQ 756
              V+KE G S +EV  +   F+AGD SHP+S +IY+KLEE+++  +  G+ P T  VL 
Sbjct: 492 ASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTELVLH 551

Query: 757 DIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDI 816
           D+DD  KE  L+ HSE+LA+AFGL++TP    ++IVKNLR C DCH V+KL+S+   R I
Sbjct: 552 DLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATGRKI 611

Query: 817 VVRDTNRFHHFKEGLCSCGDYW 838
           V RD NRFHHF +G CSCGDYW
Sbjct: 612 VFRDRNRFHHFVDGSCSCGDYW 633



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 156/366 (42%), Gaps = 47/366 (12%)

Query: 33  SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF--LGIRRLGLPLFGSTLSSVLKTCGC 90
           +L  R+P    V Y   +  +    LH+ AL L   + + R GL     TLS+ L  CGC
Sbjct: 77  ALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGC 136

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLY---------------MRTN-------- 127
           L     GR +H   VK   + +  V+T+L+ +Y               MR +        
Sbjct: 137 L---AVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTA 193

Query: 128 ---------NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
                     ++D R +FD +   ++V W +++ GY ++      L LF +M   G++P+
Sbjct: 194 MLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPD 253

Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGG-----EVVTSVCNALISMYLKSKMVRDA 233
             +    L  +A  G   +   +H+ V  NGG      +   V  AL+ MY K   + +A
Sbjct: 254 EVSVVLALSAVAQLGTAESGRWLHSFV-ANGGRRARVRLNARVGTALVDMYYKCGSLEEA 312

Query: 234 RAVF---DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            AVF    G  DRD + WN+M+ GY  +    EA E F  +   G   T  TF+ V+  C
Sbjct: 313 VAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNAC 372

Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVS 349
           + +  +   R L + + +           G MV    + G++E+A  +   M+   D   
Sbjct: 373 SHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAM 432

Query: 350 WTAMIS 355
           W +++ 
Sbjct: 433 WASLLG 438



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 185/426 (43%), Gaps = 58/426 (13%)

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF 237
            + T      +LA     + A ++H   ++   +   +V   L   Y  S  +  A A+ 
Sbjct: 20  GALTADRAAALLAGCASASRAAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALL 79

Query: 238 DGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA--GAELTRSTFVSVIKLCATTKE 295
               D  ++ + S +  + +  LH  A    + M L+  G   T  T  + +  C     
Sbjct: 80  RRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGC--- 136

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           L + R LH   +K  +  +  + T L+  Y++ G+   A  +F  MR    VVS TAM+S
Sbjct: 137 LAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLS 196

Query: 356 -------------------------------GHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
                                          G+ Q+G    A+  F QM R GV P+  +
Sbjct: 197 CYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVS 256

Query: 385 YSIILTA----QPAVSPFQVHAHII----KTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             + L+A      A S   +H+ +     +     +  VGTAL++ Y K G L+EA  VF
Sbjct: 257 VVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVF 316

Query: 437 ELI---DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
             +    ++D+VAW+AM+ GYA  G +  A++ + QL ++G+ P + TF  V+NAC+  S
Sbjct: 317 RDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACS-HS 375

Query: 494 AAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLV 547
             V++G+   A       I  K+ +  C    +V +  + G +E A ++ +  + K D  
Sbjct: 376 GLVDEGRALFAAMEEEYGIVPKVEHYGC----MVDLLGRAGRVEEAFDLVQSMKAKPDAA 431

Query: 548 SWNSMI 553
            W S++
Sbjct: 432 MWASLL 437



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 147/330 (44%), Gaps = 65/330 (19%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P+++ V +N ++  Y +     EAL LF  + R G+     ++   L     L
Sbjct: 208 RGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQL 267

Query: 92  FDHVFGRQVHCECVKSG-FAR---DVNVSTSLVDLYMRTNNVEDGRRVFDDM---NESNV 144
                GR +H      G  AR   +  V T+LVD+Y +  ++E+   VF D+    + +V
Sbjct: 268 GTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDV 327

Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
           V+W ++++GYA +  +   LE F +++ +G+ P   TF   +GVL               
Sbjct: 328 VAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITF---IGVL--------------- 369

Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT-----WNSMV-----AG 254
                     + C+        S +V + RA+F  ME+   I      +  MV     AG
Sbjct: 370 ----------NACS-------HSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAG 412

Query: 255 YVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFD 314
            V      EAF+   +M    A+   + + S++  C   K L L +++   ++ NG+   
Sbjct: 413 RVE-----EAFDLVQSM---KAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLA-- 462

Query: 315 HNIRTGLMVA--YSKCGKMEDASKIFSMMR 342
            N  T ++++  Y+  GK  +  ++ SMMR
Sbjct: 463 -NSGTYVLLSNMYAAAGKWREVGRVRSMMR 491


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 246/704 (34%), Positives = 380/704 (53%), Gaps = 37/704 (5%)

Query: 170 MQVEGIKPNSFTFSTVLGVLADEGIVATAVQV----HTMVIKNG---GEVVTSVCNALIS 222
           M   G    SFT  +VL  ++     A AV++    H   +KNG   G    +  NAL+S
Sbjct: 1   MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAF-NALLS 59

Query: 223 MYLKSKMVRDARAVFDGMEDR--DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTR 280
           MY +  +V DA+ +F G      D +TWN+MV+  V + +  EA +T  +M   G     
Sbjct: 60  MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 119

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
            TF S +  C+  + L + R++H+ V+K+  +  +  + + L+  Y+   ++  A ++F 
Sbjct: 120 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 179

Query: 340 MMREM-KDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTAQPAVSP 397
           M+ +  K +  W AMI G+ Q G  + A+  F +M  E G  P   T + +L A      
Sbjct: 180 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 239

Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
           F     VH +++K     +  V  AL++ Y + G  D A ++F ++D  D+V+W+ ++ G
Sbjct: 240 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 299

Query: 454 YAQIGDTEGAVKIYR---QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAK 510
               G    A ++ R   QL   GV PN  T  +++  C A  AA  +GK+ H  +++  
Sbjct: 300 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC-AILAAPARGKEIHGYAVRHA 358

Query: 511 LNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFK 570
           L+  + V SALV MY+K G +  +  VF R  +R+ ++WN +I  Y  HG   +A  +F 
Sbjct: 359 LDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFD 418

Query: 571 EMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSR 629
            M    +   + +TF+  + AC+H+G+VD G Q F  M  +H + PT +  +C+VD+  R
Sbjct: 419 RMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGR 478

Query: 630 AGMLEKAMDIINRMPFA-ASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
           AG L++A  ++  M       + W T+L ACRL              + L+P +++ YVL
Sbjct: 479 AGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVL 538

Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
           L N+Y+A G W   A VR  M  R V KE G SWIEV    + F+AG+ +HP S ++++ 
Sbjct: 539 LCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAH 598

Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
           +E L   +   GY PDTS VL D+DD  K A+L  HSE+LAIAFGL+    GA +++ KN
Sbjct: 599 MEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKN 658

Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           LRVC DCH   K +SK+  R+IV+RD  RFHHF+ G CSCGDYW
Sbjct: 659 LRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 242/505 (47%), Gaps = 27/505 (5%)

Query: 73  GLPLFGSTLSSVLKTCGCLFDHV----FGRQVHCECVKSGF--ARDVNVSTSLVDLYMRT 126
           G PL   TL SVL+    L         GR+ H   +K+G           +L+ +Y R 
Sbjct: 5   GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 64

Query: 127 NNVEDGRRVFDDM--NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
             V D +R+F        +VV+W +++S   ++ M D  ++  + M   G++P+  TF++
Sbjct: 65  GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 124

Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTS-VCNALISMYLKSKMVRDARAVFDGMED- 242
            L   +   ++    ++H  VIK+      S V +AL+ MY   + V  AR VFD + D 
Sbjct: 125 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 184

Query: 243 -RDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLAR 300
            +    WN+M+ GY    +  EA   F  M   AG     +T  SV+  CA ++      
Sbjct: 185 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 244

Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            +H  V+K G+  +  ++  LM  Y++ GK + A +IF+M+ ++ DVVSW  +I+G +  
Sbjct: 245 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMV-DLPDVVSWNTLITGCVVQ 303

Query: 361 GAIDLAVNF---FCQMTREGVRPNGFTYSIILT-----AQPAVSPFQVHAHIIKTNYEKS 412
           G +  A        Q+   GV PN  T   +L      A PA    ++H + ++   +  
Sbjct: 304 GHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGK-EIHGYAVRHALDTD 362

Query: 413 FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
            +VG+AL++ Y K G L  +  VF+ +  ++ + W+ ++  Y   G    A  ++ ++T+
Sbjct: 363 VAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTA 422

Query: 473 EG-VKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGN 530
            G  +PNE TF + + AC+  S  V++G Q FHA      +     + + +V +  + G 
Sbjct: 423 SGEARPNEVTFMAALAACS-HSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGR 481

Query: 531 IESASEVFKRQR--KRDLVSWNSMI 553
           ++ A  +       ++ + +W++M+
Sbjct: 482 LDEAYAMVTSMEAGEQQVSAWSTML 506



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 205/456 (44%), Gaps = 28/456 (6%)

Query: 32  QSLF-DRSPQR-NFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
           Q LF   +P R + V +N ++    +  +  EA+     +  LG+   G T +S L  C 
Sbjct: 71  QRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACS 130

Query: 90  CLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVS 146
            L     GR++H   +K    A +  V+++LVD+Y     V   R+VFD + +S   +  
Sbjct: 131 RLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGM 190

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
           W +++ GYA+  M++  L LF RM+ E G  P   T ++VL   A     A    VH  V
Sbjct: 191 WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYV 250

Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAF 265
           +K G      V NAL+ MY +      AR +F  ++  D ++WN+++ G V      +AF
Sbjct: 251 VKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAF 310

Query: 266 ETFNNMGL---AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
           +    M      G      T ++++  CA        +++H   +++ +D D  + + L+
Sbjct: 311 QLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALV 370

Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPN 381
             Y+KCG +  +  +F  +   ++ ++W  +I  +  +G    A   F +MT  G  RPN
Sbjct: 371 DMYAKCGCLALSRAVFDRLPR-RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPN 429

Query: 382 GFTYSIILTAQPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
             T+   L A              HA       E +  +   +++   + G LDEA  + 
Sbjct: 430 EVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMV 489

Query: 437 ELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
             ++  E+ + AWS ML          GA +++R +
Sbjct: 490 TSMEAGEQQVSAWSTML----------GACRLHRNV 515



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 9/335 (2%)

Query: 30  KDQSLFDRSPQ--RNFVEYNRLLFEYCRDSLHQEALNLFLGIR-RLGLPLFGSTLSSVLK 86
           K + +FD  P   +    +N ++  Y +  + +EAL LF  +    G     +T++SVL 
Sbjct: 173 KARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLP 232

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C           VH   VK G A +  V  +L+D+Y R    +  RR+F  ++  +VVS
Sbjct: 233 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVS 292

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQV---EGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
           W +L++G           +L   MQ     G+ PN+ T  T+L   A     A   ++H 
Sbjct: 293 WNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG 352

Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
             +++  +   +V +AL+ MY K   +  +RAVFD +  R++ITWN ++  Y  + L  E
Sbjct: 353 YAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGE 412

Query: 264 AFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGL 321
           A   F+ M  +G A     TF++ +  C+ +  +    QL H+    +G++   +I   +
Sbjct: 413 ATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACV 472

Query: 322 MVAYSKCGKMEDA-SKIFSMMREMKDVVSWTAMIS 355
           +    + G++++A + + SM    + V +W+ M+ 
Sbjct: 473 VDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 507


>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
 gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 565

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/537 (38%), Positives = 326/537 (60%), Gaps = 21/537 (3%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y + G + +A K+F  M + K + +W AMI+G +Q    +  ++ F +M   G  P
Sbjct: 31  LINGYVRAGDLVNARKVFDEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSP 89

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + +T   + +    +       Q+H + IK   E    V ++L + Y++ G L +   V 
Sbjct: 90  DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             +  +++VAW+ ++ G AQ G  E  + +Y+ +   G +PN+ TF +V+++C+   A  
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS-DLAIR 208

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
            QG+Q HA +IK   ++ + V S+L++MYSK G +  A++ F  +   D V W+SMI  Y
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268

Query: 557 AQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
             HG   +A+E+F  M  Q ++E + + F+ ++ AC+H+GL D+G + FD+MV ++   P
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RL 661
            ++HY+C+VDL  RAG L++A  II  MP      +W+T+L+AC               +
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + + P+DSA YVLL+N++A+   W++ + VRK M D+ VKKEAG SW E K + + F  G
Sbjct: 389 LQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMG 448

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D S  +S +IYS L+EL+  +K  GYKPDT+ VL D+D+E KE+ L QHSE+LA+AF L+
Sbjct: 449 DRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALM 508

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             P GAP++I+KNLRVC DCH   K IS ++ R+I +RD +RFHHF  G CSCGDYW
Sbjct: 509 ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 156/329 (47%), Gaps = 8/329 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R    +N ++    +   ++E L+LF  +  LG      TL SV      L
Sbjct: 45  RKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 104

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +K G   D+ V++SL  +YMR   ++DG  V   M   N+V+W +L+
Sbjct: 105 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 164

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A+N   + VL L+  M++ G +PN  TF TVL   +D  I     Q+H   IK G  
Sbjct: 165 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 224

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V +V ++LISMY K   + DA   F   ED D + W+SM++ Y  +    EA E FN M
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284

Query: 272 G-LAGAELTRSTFVSVIKLCATT----KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
                 E+    F++++  C+ +    K L L   +   V K G        T ++    
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM---VEKYGFKPGLKHYTCVVDLLG 341

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           + G ++ A  I   M    D+V W  ++S
Sbjct: 342 RAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 180/373 (48%), Gaps = 14/373 (3%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
           S  L++ Y+R  ++ + R+VFD+M +  + +W ++++G  + + N+  L LF  M   G 
Sbjct: 28  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
            P+ +T  +V    A    V+   Q+H   IK G E+   V ++L  MY+++  ++D   
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           V   M  R+ + WN+++ G   N         +  M ++G    + TFV+V+  C+    
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               +Q+H++ +K G      + + L+  YSKCG + DA+K FS  RE +D V W++MIS
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS-EREDEDEVMWSSMIS 266

Query: 356 GHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTA-------QPAVSPFQVHAHIIKT 407
            +  +G  D A+  F  M  +  +  N   +  +L A          +  F +     K 
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE--KY 324

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKI 466
            ++      T +++   + G LD+A  +   +  K DIV W  +L+      + E A ++
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384

Query: 467 YRQLTSEGVKPNE 479
           ++++    + PN+
Sbjct: 385 FKEILQ--IDPND 395



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 5/207 (2%)

Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
           S   V+  + K NY  S      L+N YV+ G L  A KVF+ + ++ +  W+AM+AG  
Sbjct: 12  SAVAVYGRMRKKNYMSS----NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLI 67

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q    E  + ++R++   G  P+E+T  SV +  +A   +V  G+Q H  +IK  L   L
Sbjct: 68  QFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSG-SAGLRSVSIGQQIHGYTIKYGLELDL 126

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V+S+L  MY + G ++    V +    R+LV+WN++I G AQ+G  +  L ++K M+  
Sbjct: 127 VVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS 186

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQ 602
               + ITF+ V+++C+   +  +GQQ
Sbjct: 187 GCRPNKITFVTVLSSCSDLAIRGQGQQ 213



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 63/176 (35%), Gaps = 53/176 (30%)

Query: 522 VTMYSKKGNIESASEVFKRQRK-------------------------------RDLVSWN 550
           ++MYSK G+  SA  V+ R RK                               R L +WN
Sbjct: 1   MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60

Query: 551 SMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY------- 603
           +MI G  Q    ++ L +F+EM       D  T   V +       V  GQQ        
Sbjct: 61  AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120

Query: 604 ---FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
               D++VN           S +  +Y R G L+    +I  MP   +   W T++
Sbjct: 121 GLELDLVVN-----------SSLAHMYMRNGKLQDGEIVIRSMP-VRNLVAWNTLI 164


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/608 (35%), Positives = 338/608 (55%), Gaps = 52/608 (8%)

Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
           ST+ ++I++C+ T+ L   +++H  +  +G      I   ++  Y+KCG + DA K+F  
Sbjct: 88  STYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDE 147

Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE------------------------ 376
           M E +DV SW  M++G+ + G ++ A N F +M                           
Sbjct: 148 MPE-RDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVL 206

Query: 377 --------GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYV 424
                     +PN FT S  + A  A+       ++H HI++   +    + ++L++ Y 
Sbjct: 207 YSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYG 266

Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
           K G +DEA  +F+ I +KD+V+W++M+  Y +         ++ +L     +PNE+TFS 
Sbjct: 267 KCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSG 326

Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
           V+NAC A     E G+Q H    +   +     SS+L+ MY+K GNIESA  V     K 
Sbjct: 327 VLNAC-ADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKP 385

Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
           DLVS  S+I GYAQ+G   +AL+ F  + +   + D +TF+ V++ACTHAGLV++G ++F
Sbjct: 386 DLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 445

Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----- 659
             +  +H +  T +HY+C+VDL +R+G  E+   +++ MP   S  +W +VL  C     
Sbjct: 446 YSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGN 505

Query: 660 ---------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
                     L  ++P +   YV ++N+YAA G W+E  ++RK M +  + K+ G SW E
Sbjct: 506 IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTE 565

Query: 711 VKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQH 770
           +K K + F+A D SHP  NQI   L EL  ++K+ GY P TS VL D++DE KE  L  H
Sbjct: 566 IKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYH 625

Query: 771 SERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEG 830
           SE+LA+AF +++T  G  +++ KNLR C DCH+ IK ISK+ +R I +RD+ RFH F+ G
Sbjct: 626 SEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENG 685

Query: 831 LCSCGDYW 838
            CSC DYW
Sbjct: 686 QCSCRDYW 693



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/537 (24%), Positives = 239/537 (44%), Gaps = 72/537 (13%)

Query: 22  LRSPFYSKK---DQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG--IRRLGLPL 76
           L S + S+K   D+  FD   +   V   RL    CR +   EA+++  G  + R  + L
Sbjct: 23  LSSSYASQKRFSDKKFFDSKLEDGGVVVERL----CRANRFGEAIDVLCGQKLLREAVQL 78

Query: 77  FG-------STLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
            G       ST  ++++ C        G++VH     SGF   + +   ++ +Y +  ++
Sbjct: 79  LGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSL 138

Query: 130 EDGRRVFDDMNESNVV-------------------------------SWTSLLSGYARNK 158
            D R+VFD+M E +V                                SWT++++GY +  
Sbjct: 139 VDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKD 198

Query: 159 MNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
             +  L L+  MQ V   KPN FT S+ +   A    +    ++H  +++ G +    + 
Sbjct: 199 QPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLW 258

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           ++L+ MY K   + +AR +FD + D+D ++W SM+  Y  +    E F  F+ +  +   
Sbjct: 259 SSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCER 318

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               TF  V+  CA      L RQ+H  + + G D      + L+  Y+KCG +E A  +
Sbjct: 319 PNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHV 378

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
                +  D+VS T++I G+ QNG  D A+ +F  + + G +P+  T+  +L+A      
Sbjct: 379 VDGCPK-PDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSA------ 431

Query: 398 FQVHAHIIKTNYEKSFSVG------------TALLNAYVKKGILDEAAKVF-ELIDEKDI 444
              HA +++   E  +S+             T L++   + G  ++   V  E+  +   
Sbjct: 432 -CTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSK 490

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP-NEFTFSSVINACTAPSAAVEQGK 500
             W+++L G +  G+ + A +  ++L    ++P N  T+ ++ N   A     E+GK
Sbjct: 491 FLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGK 545


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/677 (33%), Positives = 379/677 (55%), Gaps = 38/677 (5%)

Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
           +++++    ++  + T   +HT ++K+G  + +   + LI  Y+K  ++ +AR +FD M 
Sbjct: 4   YTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62

Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
           +R  +TWNSM++ +V+     EA E ++NM   G      TF ++ K  +     R  ++
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 302 LHSQVLKNGIDF-DHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
            H   +  G +  D  + TG++  Y+K GKM+DA  +F  + + KDVV +TA+I G+ Q+
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLD-KDVVLFTALIVGYNQH 181

Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVG 416
           G    A+  F  M    ++PN +T + +L +       V+   +H  ++K   E   +  
Sbjct: 182 GLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQ 241

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
           T+LL  Y K  +++++ KVF  +     V W++ + G  Q G  E A+ ++R++    + 
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSIS 301

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
           PN FT SS+++AC++  A +E G+Q HA ++K  ++    V +AL+ +Y K GN+E A  
Sbjct: 302 PNHFTLSSILHACSSL-AMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARS 360

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF    + D+VS N+MI  YAQ+G   +ALE+F+ +++  LE + +TFI ++ AC +AGL
Sbjct: 361 VFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGL 420

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V+EG Q F ++ N H I  T +HY+CM+DL  RA   E+A  +I           WRT+L
Sbjct: 421 VEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLL 479

Query: 657 AAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            AC              +++   P D   ++LL+N+YA+ G W     ++    D ++KK
Sbjct: 480 NACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKK 539

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
               SW+++  + ++F+AGD+SHP++++I   L EL  ++   GY PDT +VLQD+++E 
Sbjct: 540 TPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEK 599

Query: 763 KEAILSQHSERLAIAFGLVATPA-GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDT 821
           K + L  HSE+LAIAF L  T      ++I KNLRVCGD               I+ RD 
Sbjct: 600 KISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDY--------------IIARDA 645

Query: 822 NRFHHFKEGLCSCGDYW 838
            RFHHFK G+CSC DYW
Sbjct: 646 KRFHHFKGGICSCKDYW 662



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/511 (28%), Positives = 262/511 (51%), Gaps = 18/511 (3%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           + +H   +KSG          L+D Y++ + + + R++FD+M   ++V+W S++S +   
Sbjct: 21  KSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTS-V 216
                 +EL+  M  EG+ P+++TFS +    ++ G+     + H + +  G EV    V
Sbjct: 80  GKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
              ++ MY K   ++DAR VFD + D+D + + +++ GY  + L  EA E F +M  +  
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRI 199

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           +    T  SV+  C    +L   + +H  V+K G++     +T L+  YSKC  +ED+ K
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIK 259

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
           +F+ +      V+WT+ I G +QNG  ++A++ F +M R  + PN FT S IL A  +++
Sbjct: 260 VFNSLAYASH-VTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLA 318

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 Q+HA  +K   + +  V  AL++ Y K G +++A  VF+ + E DIV+ + M+ 
Sbjct: 319 MLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIY 378

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SI 507
            YAQ G    A++++ +L   G++PN  TF S++ AC   +  VE+G Q  +      SI
Sbjct: 379 AYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACN-NAGLVEEGCQIFSLIRNNHSI 437

Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
           +   ++  C    ++ +  +    E A+ + +  +  D++ W +++     HG  + A +
Sbjct: 438 ELTRDHYTC----MIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEK 493

Query: 568 VFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
             K+M  Q    DG T I +      AG  D
Sbjct: 494 FMKKMLDQAPR-DGGTHILLTNIYASAGKWD 523



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 212/449 (47%), Gaps = 7/449 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + LFD  P R+ V +N ++  +      +EA+ L+  +   G+     T S++ K    +
Sbjct: 55  RKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEM 114

Query: 92  FDHVFGRQVHCECVKSGF-ARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
                G++ H   V  GF   D  V+T +VD+Y +   ++D R VFD + + +VV +T+L
Sbjct: 115 GVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTAL 174

Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
           + GY ++ ++   LE+F  M    IKPN +T ++VL    + G +     +H +V+K G 
Sbjct: 175 IVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGL 234

Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
           E V +   +L++MY K  MV D+  VF+ +     +TW S + G V N     A   F  
Sbjct: 235 ESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFRE 294

Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
           M          T  S++  C++   L    Q+H+  +K G+D +  +   L+  Y KCG 
Sbjct: 295 MMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGN 354

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
           +E A  +F  + E+ D+VS   MI  + QNG    A+  F ++ + G+ PN  T+  IL 
Sbjct: 355 VEKARSVFDSLTEL-DIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILL 413

Query: 391 AQPAVSPFQVHAHI---IKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDEKDIV 445
           A       +    I   I+ N+    +    T +++   +    +EA  + E     D++
Sbjct: 414 ACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVI 473

Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
            W  +L      G+ E A K  +++  + 
Sbjct: 474 QWRTLLNACKIHGEVEMAEKFMKKMLDQA 502



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 172/355 (48%), Gaps = 2/355 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
           K  + +FDR   ++ V +  L+  Y +  L  EAL +F  +    +     TL+SVL +C
Sbjct: 154 KDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSC 213

Query: 89  GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
           G L D V G+ +H   VK G    V   TSL+ +Y + N VED  +VF+ +  ++ V+WT
Sbjct: 214 GNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWT 273

Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
           S + G  +N   +  L +F  M    I PN FT S++L   +   ++    Q+H + +K 
Sbjct: 274 SFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKL 333

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
           G +    V  ALI +Y K   V  AR+VFD + + D ++ N+M+  Y  N    EA E F
Sbjct: 334 GVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELF 393

Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN-GIDFDHNIRTGLMVAYSK 327
             +   G E    TF+S++  C     +    Q+ S +  N  I+   +  T ++    +
Sbjct: 394 ERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGR 453

Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
             + E+A+ +    +   DV+ W  +++    +G +++A  F  +M  +  R  G
Sbjct: 454 AKRFEEATMLIEEGKN-PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGG 507


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/664 (35%), Positives = 360/664 (54%), Gaps = 51/664 (7%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N L++MY K   +  AR +FD M  R+ ++W  +V+GY    L  E F  F+ M LA   
Sbjct: 119 NNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGM-LACFR 177

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG-------- 329
                F SV+  C   ++++   Q+H+  LK  +DF   +   L+  YSKC         
Sbjct: 178 PNEFAFASVLCAC-EEQDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCD 236

Query: 330 -KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
              +DA  +F  M E ++++SW +MISG    G  D A+  F  M   G+R N  T   +
Sbjct: 237 QTTDDAWMVFKSM-EYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGV 295

Query: 389 LTA--------------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK-KGILDEAA 433
           L++                  + FQ+H   +K+       V TAL+ +Y    G + +  
Sbjct: 296 LSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCF 355

Query: 434 KVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
           K+F +   E DIV+W+A+++ +A+  D E A  ++ QL  E    +  TFS  + AC A 
Sbjct: 356 KLFLDTSGEHDIVSWTAIISVFAE-RDPEQAFLLFCQLHRENFVLDRHTFSIALKAC-AY 413

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
               +   + H+  +K   +N   VS+AL+  Y + G++  + +VF      DLVSWNSM
Sbjct: 414 FVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSM 473

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           +  YA HG  K AL++FK+M   D+  D  TF+ ++ AC+HAGLV+EG Q F+ M   H 
Sbjct: 474 LKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHG 530

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------------ 660
           I P ++HYSCMVDLY RAG + +A ++I +MP    + +W ++L +CR            
Sbjct: 531 IAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAA 590

Query: 661 --LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
                L P +S  Y+ +SN+Y++ G + E   +RK M D KV+K  G SW+EV  + + F
Sbjct: 591 DKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEF 650

Query: 719 LAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAF 778
            +G   HP+   I S+LE L  +LK+ GY P+    L DI+ EH E  L  HSE++A+ F
Sbjct: 651 TSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVF 710

Query: 779 GL----VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSC 834
            +    ++  AG  ++I+KN+R+C DCH  +KL SKL +++IVVRD+NRFHHFK   CSC
Sbjct: 711 AIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKYATCSC 770

Query: 835 GDYW 838
            DYW
Sbjct: 771 NDYW 774



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 245/488 (50%), Gaps = 36/488 (7%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D+ ++ +L+++Y +  +++  R +FD M   N VSWT L+SGYA+  +      LF  M 
Sbjct: 114 DIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGM- 172

Query: 172 VEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK----- 226
           +   +PN F F++VL    +E  V   +QVH   +K   +    V NALI+MY K     
Sbjct: 173 LACFRPNEFAFASVL-CACEEQDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGF 231

Query: 227 ----SKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRST 282
                +   DA  VF  ME R+ I+WNSM++G+    L  +A   F +M   G     +T
Sbjct: 232 GGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTT 291

Query: 283 FVSV---IKLCATTKE-------LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC-GKM 331
            + V   +  C +T +       L+   QLH   +K+G+  +  + T L+ +Y+   G +
Sbjct: 292 LLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHI 351

Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
            D  K+F       D+VSWTA+IS   +    + A   FCQ+ RE    +  T+SI L A
Sbjct: 352 SDCFKLFLDTSGEHDIVSWTAIISVFAERDP-EQAFLLFCQLHRENFVLDRHTFSIALKA 410

Query: 392 QPAV----SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
                   +  +VH+ ++K  +     V  AL++AY + G L  + +VF  +   D+V+W
Sbjct: 411 CAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSW 470

Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACS 506
           ++ML  YA  G  + A+ +++Q+    V P+  TF +++ AC+  +  VE+G Q F++ +
Sbjct: 471 NSMLKSYAIHGRAKDALDLFKQMD---VHPDSATFVALLAACS-HAGLVEEGTQIFNSMT 526

Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMICGYAQHGH---T 562
               +   L   S +V +Y + G I  A E+ ++   K D V W+S++    +HG     
Sbjct: 527 ESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLA 586

Query: 563 KKALEVFK 570
           K A + FK
Sbjct: 587 KLAADKFK 594



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 214/489 (43%), Gaps = 81/489 (16%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLP---LFGSTLSSVLKTCGC 90
           LFD+ P+RNFV +  L+  Y +  L +E   LF G+     P    F S L      C C
Sbjct: 137 LFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLACFRPNEFAFASVL------CAC 190

Query: 91  LFDHV-FGRQVHCECVKSGFARDVNVSTSLVDLYMRTN---------NVEDGRRVFDDMN 140
               V +G QVH   +K      V V+ +L+ +Y + +           +D   VF  M 
Sbjct: 191 EEQDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSME 250

Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA---------- 190
             N++SW S++SG+    + D+ + LF  M   GI+ NS   +T+LGVL+          
Sbjct: 251 YRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNS---TTLLGVLSSLNHCMSTSD 307

Query: 191 ---DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLK-SKMVRDARAVF-DGMEDRDS 245
              +   +    Q+H + +K+G      V  AL+  Y      + D   +F D   + D 
Sbjct: 308 DINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDI 367

Query: 246 ITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ 305
           ++W ++++ +   +   +AF  F  +      L R TF   +K CA     + A ++HSQ
Sbjct: 368 VSWTAIISVFAERDPE-QAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQ 426

Query: 306 VLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL 365
           V+K G   D  +   L+ AY + G +  + ++F+ M    D+VSW +M+  +  +G    
Sbjct: 427 VMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEM-GCHDLVSWNSMLKSYAIHGRAKD 485

Query: 366 AVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVK 425
           A++ F QM    V P+  T+                                ALL A   
Sbjct: 486 ALDLFKQMD---VHPDSATF-------------------------------VALLAACSH 511

Query: 426 KGILDEAAKVFELIDEKDIVA-----WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
            G+++E  ++F  + E   +A     +S M+  Y + G    A ++ R++    +KP+  
Sbjct: 512 AGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMP---MKPDSV 568

Query: 481 TFSSVINAC 489
            +SS++ +C
Sbjct: 569 IWSSLLGSC 577



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 17/346 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKT---CGC 90
           +F     RN + +N ++  +    L  +A+ LF  +   G+    +TL  VL +   C  
Sbjct: 245 VFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMS 304

Query: 91  LFDHVFGR-------QVHCECVKSGFARDVNVSTSLVDLYMRTN-NVEDGRRVF-DDMNE 141
             D +          Q+HC  VKSG   +V V T+LV  Y     ++ D  ++F D   E
Sbjct: 305 TSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGE 364

Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
            ++VSWT+++S +A        L LF ++  E    +  TFS  L   A       A +V
Sbjct: 365 HDIVSWTAIISVFAERDPEQAFL-LFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEV 423

Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
           H+ V+K G    T V NALI  Y +S  +  +  VF  M   D ++WNSM+  Y  +   
Sbjct: 424 HSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRA 483

Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTG 320
            +A + F  M +       +TFV+++  C+    +    Q+ +S    +GI    +  + 
Sbjct: 484 KDALDLFKQMDV---HPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSC 540

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
           ++  Y + GK+ +A ++   M    D V W++++    ++G  DLA
Sbjct: 541 MVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLA 586


>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 630

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/590 (38%), Positives = 341/590 (57%), Gaps = 56/590 (9%)

Query: 301 QLHSQVLKNGIDFDHN---IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
           Q+H+ +L++ +        +   L  AY+  GK+  +  +F    +  D+  +TA I+  
Sbjct: 45  QIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID-PDLFLFTAAINTA 103

Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNY-------- 409
             NG  D A   + Q+    + PN FT+S IL +    S   +H H++K           
Sbjct: 104 SINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKSGKLIHTHVLKFGLGLDPYVAT 163

Query: 410 -----------------------EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
                                  E+S    TA++  Y K+G ++ A  +F+ + E+DIV+
Sbjct: 164 GLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVS 223

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
           W+ M+ GY+Q G    A+ ++++L ++G  KP+E T  + ++AC+    A+E G+  H  
Sbjct: 224 WNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQ-IGALETGRWIHVF 282

Query: 506 --SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
             S + +LN  +C  +AL+ MYSK G++E A  VF    ++D+V+WN+MI GYA HG+++
Sbjct: 283 VNSSRIRLNVKVC--TALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQ 340

Query: 564 KALEVFKEMRR-QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
            AL +F EM+    L+   ITFIG + AC HAGLV+EG Q F+ M  E+ I P +EHY C
Sbjct: 341 DALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGC 400

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHD 668
           +V L  RAG L++A +II  M   A + +W +VL +C+L              I     +
Sbjct: 401 LVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISN 460

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
           S IYVLLSN+YA  G ++  A+VR LM ++ + KE G S IE+ NK + F AGD  H +S
Sbjct: 461 SGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLKS 520

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            +IY+ L ++S R+K  GY P+T+ VL D+++  KE  L  HSERLAIA+GL++T  G+P
Sbjct: 521 KEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGSP 580

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           L+I KNLRVC DCHTV KLISK+  R IV+RD NRFHHF +G CSC D+W
Sbjct: 581 LKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 38/309 (12%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR-------------- 125
           T SS+LK+C        G+ +H   +K G   D  V+T LVD+Y +              
Sbjct: 130 TFSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRM 185

Query: 126 -----------------TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFH 168
                              NVE  R +FD M E ++VSW  ++ GY+++      L LF 
Sbjct: 186 PERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQ 245

Query: 169 RMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKS 227
           ++  +G  KP+  T    L   +  G + T   +H  V  +   +   VC ALI MY K 
Sbjct: 246 KLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKC 305

Query: 228 KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSV 286
             + +A  VF+    +D + WN+M+ GY  +    +A   F+ M G+ G + T  TF+  
Sbjct: 306 GSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGT 365

Query: 287 IKLCATTKELRLARQL-HSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
           ++ CA    +    Q+  S   + GI         L+    + G+++ A +I   M    
Sbjct: 366 LQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEA 425

Query: 346 DVVSWTAMI 354
           D V W++++
Sbjct: 426 DSVLWSSVL 434



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/463 (22%), Positives = 197/463 (42%), Gaps = 79/463 (17%)

Query: 123 YMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTF 182
           Y     +     +F    + ++  +T+ ++  + N + D+   L+ ++    I PN FTF
Sbjct: 72  YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFTF 131

Query: 183 STVLGVLADEGIVATAVQVHTMVIK------------------NGGEVVTS--------- 215
           S++L   + +    +   +HT V+K                   GG+VV++         
Sbjct: 132 SSILKSCSTK----SGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPE 187

Query: 216 ----VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
                  A+I+ Y K   V  ARA+FD M +RD ++WN M+ GY  +    +A   F  +
Sbjct: 188 RSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKL 247

Query: 272 GLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
              G  +    T V+ +  C+    L   R +H  V  + I  +  + T L+  YSKCG 
Sbjct: 248 LADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGS 307

Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIIL 389
           +E+A  +F+     KD+V+W AMI+G+  +G    A+  F +M    G++P   T+    
Sbjct: 308 LEEAVLVFNDTPR-KDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITF---- 362

Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----DI 444
                                    +GT  L A    G+++E  ++FE + ++      I
Sbjct: 363 -------------------------IGT--LQACAHAGLVNEGIQIFESMGQEYGIKPKI 395

Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
             +  +++   + G  + A +I + +  E    +   +SSV+ +C         GK+   
Sbjct: 396 EHYGCLVSLLGRAGQLKRAYEIIKNMNMEA---DSVLWSSVLGSCKL-HGEFMLGKEIAE 451

Query: 505 CSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
             I   ++N+  +   L  +Y+  G+ E  ++V    +++ +V
Sbjct: 452 YLIGQNISNS-GIYVLLSNIYALVGDYEGVAKVRNLMKEKGIV 493



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 113/226 (50%), Gaps = 4/226 (1%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVLKTCGC 90
           ++LFDR  +R+ V +N ++  Y +     +AL LF  +   G P     T+ + L  C  
Sbjct: 210 RALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQ 269

Query: 91  LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
           +     GR +H     S    +V V T+L+D+Y +  ++E+   VF+D    ++V+W ++
Sbjct: 270 IGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 329

Query: 151 LSGYARNKMNDRVLELFHRMQ-VEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKN 208
           ++GYA +  +   L LF  MQ + G++P   TF   L   A  G+V   +Q+  +M  + 
Sbjct: 330 ITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEY 389

Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVA 253
           G +        L+S+  ++  ++ A  +   M  + DS+ W+S++ 
Sbjct: 390 GIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLG 435


>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
 gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
          Length = 688

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 240/693 (34%), Positives = 390/693 (56%), Gaps = 39/693 (5%)

Query: 80  TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
           TL   LK C    D   G Q+H     SGF   V VS +++ +Y +    ++   +F+++
Sbjct: 5   TLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL 62

Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV-LADEGIVATA 198
            + +VVSW ++LSG+  N++    L    RM+  G+  ++FT+ST L   +  EG +   
Sbjct: 63  VDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL-LG 118

Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT- 257
           +Q+ + V+K G E    V N+ I+MY +S   R AR VFD M  +D I+WNS+++G    
Sbjct: 119 LQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 178

Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
                EA   F +M   G EL   +F SVI  C    +L+LARQ+H   +K G +    +
Sbjct: 179 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV 238

Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
              LM  YSKCG +E    +F  M E ++VVSWT MIS +      D AV+ F  M  +G
Sbjct: 239 GNILMSRYSKCGVLEAVKSVFHQMSE-RNVVSWTTMISSNK-----DDAVSIFLNMRFDG 292

Query: 378 VRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
           V PN  T+  ++ A    +      ++H   IKT +    SVG + +  Y K   L++A 
Sbjct: 293 VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 352

Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-AP 492
           K FE I  ++I++W+AM++G+AQ G +  A+K++    +E + PNE+TF SV+NA   A 
Sbjct: 353 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAE 411

Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
             +V+QG++ HA  +K  LN+   VSSAL+ MY+K+GNI+ + +VF    +++   W S+
Sbjct: 412 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 471

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
           I  Y+ HG  +  + +F +M ++++  D +TF+ V+TAC   G+VD+G + F++M+  ++
Sbjct: 472 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYN 531

Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----------- 661
           + P+ EHYSCMVD+  RAG L++A ++++ +P     ++ +++L +CRL           
Sbjct: 532 LEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVA 591

Query: 662 ---ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS- 717
              + ++P  S  YV + N+YA    W + A +RK M  + V KEAG+SWI+V +   S 
Sbjct: 592 ELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSL 651

Query: 718 ----FLAGDISHPQSNQIYSKLEELSTRLKDAG 746
               F +GD SHP+S++IY  +E +   +   G
Sbjct: 652 TMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 684



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 151/554 (27%), Positives = 265/554 (47%), Gaps = 23/554 (4%)

Query: 34  LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
           +F+     + V +N +L  +     +Q ALN  + ++  G+     T S+ L  C     
Sbjct: 58  IFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 114

Query: 94  HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            + G Q+    VK+G   D+ V  S + +Y R+ +    RRVFD+M+  +++SW SLLSG
Sbjct: 115 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 174

Query: 154 YAR-NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
            ++        + +F  M  EG++ +  +F++V+     E  +  A Q+H + IK G E 
Sbjct: 175 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 234

Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
           +  V N L+S Y K  ++   ++VF  M +R+ ++W +M++         +A   F NM 
Sbjct: 235 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMR 289

Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
             G      TFV +I      ++++   ++H   +K G   + ++    +  Y+K   +E
Sbjct: 290 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALE 349

Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
           DA K F  +   ++++SW AMISG  QNG    A+  F     E   PN +T+  +L A 
Sbjct: 350 DAKKAFEDIT-FREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAI 407

Query: 393 PAVSPFQV------HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
                  V      HAH++K        V +ALL+ Y K+G +DE+ KVF  + +K+   
Sbjct: 408 AFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFV 467

Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
           W+++++ Y+  GD E  + ++ ++  E V P+  TF SV+ AC      V++G +     
Sbjct: 468 WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK-GMVDKGYEIFNMM 526

Query: 507 IKA-KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW-NSMICGYAQHGHTK- 563
           I+   L  +    S +V M  + G ++ A E+          S   SM+     HG+ K 
Sbjct: 527 IEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKM 586

Query: 564 --KALEVFKEMRRQ 575
             K  E+  EM+ +
Sbjct: 587 GAKVAELAMEMKPE 600



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           +S+F +  +RN V +  ++      S   +A+++FL +R  G+     T   ++    C 
Sbjct: 256 KSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 310

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G ++H  C+K+GF  + +V  S + LY +   +ED ++ F+D+    ++SW +++
Sbjct: 311 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 370

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL--ADEGIVATAVQVHTMVIKNG 209
           SG+A+N  +   L++F     E + PN +TF +VL  +  A++  V    + H  ++K G
Sbjct: 371 SGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLG 429

Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
                 V +AL+ MY K   + ++  VF+ M  ++   W S+++ Y ++         F+
Sbjct: 430 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFH 489

Query: 270 NMGLAGAELTRSTFVSVIKLC 290
            M          TF+SV+  C
Sbjct: 490 KMIKENVAPDLVTFLSVLTAC 510


>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/537 (38%), Positives = 326/537 (60%), Gaps = 21/537 (3%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  Y + G + +A K+F  M + K + +W AMI+G +Q    +  ++ F +M   G  P
Sbjct: 29  LINGYVRAGDLVNARKVFDEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSP 87

Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
           + +T   + +    +       Q+H + IK   E    V ++L + Y++ G L +   V 
Sbjct: 88  DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 147

Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
             +  +++VAW+ ++ G AQ G  E  + +Y+ +   G +PN+ TF +V+++C+   A  
Sbjct: 148 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS-DLAIR 206

Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
            QG+Q HA +IK   ++ + V S+L++MYSK G +  A++ F  +   D V W+SMI  Y
Sbjct: 207 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 266

Query: 557 AQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
             HG   +A+E+F  M  Q ++E + + F+ ++ AC+H+GL D+G + FD+MV ++   P
Sbjct: 267 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 326

Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RL 661
            ++HY+C+VDL  RAG L++A  II  MP      +W+T+L+AC               +
Sbjct: 327 GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 386

Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
           + + P+DSA YVLL+N++A+   W++ + VRK M D+ VKKEAG SW E K + + F  G
Sbjct: 387 LQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMG 446

Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
           D S  +S +IYS L+EL+  +K  GYKPDT+ VL D+D+E KE+ L QHSE+LA+AF L+
Sbjct: 447 DRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALM 506

Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
             P GAP++I+KNLRVC DCH   K IS ++ R+I +RD +RFHHF  G CSCGDYW
Sbjct: 507 ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 156/329 (47%), Gaps = 8/329 (2%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD  P R    +N ++    +   ++E L+LF  +  LG      TL SV      L
Sbjct: 43  RKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 102

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+Q+H   +K G   D+ V++SL  +YMR   ++DG  V   M   N+V+W +L+
Sbjct: 103 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 162

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
            G A+N   + VL L+  M++ G +PN  TF TVL   +D  I     Q+H   IK G  
Sbjct: 163 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 222

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
            V +V ++LISMY K   + DA   F   ED D + W+SM++ Y  +    EA E FN M
Sbjct: 223 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 282

Query: 272 G-LAGAELTRSTFVSVIKLCATT----KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
                 E+    F++++  C+ +    K L L   +   V K G        T ++    
Sbjct: 283 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM---VEKYGFKPGLKHYTCVVDLLG 339

Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           + G ++ A  I   M    D+V W  ++S
Sbjct: 340 RAGCLDQAEAIIRSMPIKTDIVIWKTLLS 368



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 180/373 (48%), Gaps = 14/373 (3%)

Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
           S  L++ Y+R  ++ + R+VFD+M +  + +W ++++G  + + N+  L LF  M   G 
Sbjct: 26  SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 85

Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARA 235
            P+ +T  +V    A    V+   Q+H   IK G E+   V ++L  MY+++  ++D   
Sbjct: 86  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 145

Query: 236 VFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKE 295
           V   M  R+ + WN+++ G   N         +  M ++G    + TFV+V+  C+    
Sbjct: 146 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 205

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
               +Q+H++ +K G      + + L+  YSKCG + DA+K FS  RE +D V W++MIS
Sbjct: 206 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS-EREDEDEVMWSSMIS 264

Query: 356 GHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTA-------QPAVSPFQVHAHIIKT 407
            +  +G  D A+  F  M  +  +  N   +  +L A          +  F +     K 
Sbjct: 265 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE--KY 322

Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-DIVAWSAMLAGYAQIGDTEGAVKI 466
            ++      T +++   + G LD+A  +   +  K DIV W  +L+      + E A ++
Sbjct: 323 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 382

Query: 467 YRQLTSEGVKPNE 479
           ++++    + PN+
Sbjct: 383 FKEILQ--IDPND 393



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 5/207 (2%)

Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
           S   V+  + K NY  S      L+N YV+ G L  A KVF+ + ++ +  W+AM+AG  
Sbjct: 10  SAVAVYGRMRKKNYMSS----NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLI 65

Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
           Q    E  + ++R++   G  P+E+T  SV +  +A   +V  G+Q H  +IK  L   L
Sbjct: 66  QFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSG-SAGLRSVSIGQQIHGYTIKYGLELDL 124

Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
            V+S+L  MY + G ++    V +    R+LV+WN++I G AQ+G  +  L ++K M+  
Sbjct: 125 VVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKIS 184

Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQ 602
               + ITF+ V+++C+   +  +GQQ
Sbjct: 185 GCRPNKITFVTVLSSCSDLAIRGQGQQ 211



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 61/174 (35%), Gaps = 53/174 (30%)

Query: 524 MYSKKGNIESASEVFKRQRK-------------------------------RDLVSWNSM 552
           MYSK G+  SA  V+ R RK                               R L +WN+M
Sbjct: 1   MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 60

Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY--------- 603
           I G  Q    ++ L +F+EM       D  T   V +       V  GQQ          
Sbjct: 61  IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 120

Query: 604 -FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
             D++VN           S +  +Y R G L+    +I  MP   +   W T++
Sbjct: 121 ELDLVVN-----------SSLAHMYMRNGKLQDGEIVIRSMP-VRNLVAWNTLI 162


>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Cucumis sativus]
          Length = 610

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 211/556 (37%), Positives = 331/556 (59%), Gaps = 21/556 (3%)

Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
           R++H++V K+ +  D  I   L+  Y+K G  EDA K+F  M   KD+VSW ++ISG  +
Sbjct: 59  REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH-KDLVSWNSLISGFSR 117

Query: 360 NGAIDLAVNFFCQMTRE-GVRPNGFT-YSIILTAQPAVSPFQ-VHAHIIKTNYEKSFSVG 416
              + +++  F  M  E  V+PN  T  S+I     A+   + +H   IK        V 
Sbjct: 118 --CLHMSLTAFYTMKFEMSVKPNEVTILSMISACNGALDAGKYIHGFGIKVGGTLEVKVA 175

Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
            +L+N Y K G L  A ++FE I + + V+W++++A     G     +  + ++   G++
Sbjct: 176 NSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIE 235

Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
            +E T  +++ AC       +  +  H           + +++AL+  Y+K G + ++  
Sbjct: 236 QDEGTILALLQACLHLGVG-KLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYG 294

Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
           VF      D V+W +M+ GYA HG  ++A+++F+ M  + LE D +TF  +++AC+H+GL
Sbjct: 295 VFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGL 354

Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
           V+EG+ YF++M   + I P ++HYSCMVDL  R G+L  A ++I  MP   +A VW  +L
Sbjct: 355 VNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALL 414

Query: 657 AACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKK 702
            ACR              LI+++P D   Y++LSNMY+A+  W++ A+VR L+ +R +K+
Sbjct: 415 GACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKR 474

Query: 703 EAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEH 762
             GYS IE  NK + F  GD SHP++ +IYSKLEEL  +++ AGY   T YVLQD+++E 
Sbjct: 475 TPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYVLQDVEEEV 534

Query: 763 KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTN 822
           KE ++++HSE+LAIAFGL+ +  G  L I KNLR+CGDCH+  KLIS +E+R I++RD  
Sbjct: 535 KEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKRTIIIRDPK 594

Query: 823 RFHHFKEGLCSCGDYW 838
           RFHHF +G CSC DYW
Sbjct: 595 RFHHFSDGFCSCADYW 610



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 192/397 (48%), Gaps = 17/397 (4%)

Query: 98  RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
           R++H    KS   RD  +   LV  Y +    ED  ++FDDM   ++VSW SL+SG++R 
Sbjct: 59  REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR- 117

Query: 158 KMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
                 L  F+ M+ E  +KPN  T  +++   A  G +     +H   IK GG +   V
Sbjct: 118 -CLHMSLTAFYTMKFEMSVKPNEVTILSMIS--ACNGALDAGKYIHGFGIKVGGTLEVKV 174

Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
            N+LI+MY KS  +  A  +F+ + D ++++WNS++A  VTN    E  + FN M   G 
Sbjct: 175 ANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGI 234

Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           E    T +++++ C      +LA  +H  +   G      I T L+  Y+K G++  +  
Sbjct: 235 EQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYG 294

Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA----- 391
           +F+ +    D V+WTAM++G+  +G    A+  F  M  +G+ P+  T++ +L+A     
Sbjct: 295 VFTEV-GFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSG 353

Query: 392 --QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWS 448
                 S F V + +     E      + +++   + G+L++A +V + +  E +   W 
Sbjct: 354 LVNEGKSYFNVMSEVY--GIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWG 411

Query: 449 AMLAGYAQIGDTEGAVKIYRQLTS-EGVKPNEFTFSS 484
           A+L      G+ E   ++   L + E + P  +   S
Sbjct: 412 ALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLS 448



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 154/343 (44%), Gaps = 8/343 (2%)

Query: 27  YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
           Y++    LFD  P ++ V +N L+  + R  LH      +     + +     T+ S++ 
Sbjct: 89  YAEDALKLFDDMPHKDLVSWNSLISGFSR-CLHMSLTAFYTMKFEMSVKPNEVTILSMIS 147

Query: 87  TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
            C    D   G+ +H   +K G   +V V+ SL+++Y ++ ++    R+F+ + + N VS
Sbjct: 148 ACNGALDA--GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVS 205

Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
           W S+++    N      ++ F++M+  GI+ +  T   +L      G+   A  +H ++ 
Sbjct: 206 WNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMF 265

Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
             G     ++  AL+  Y K   +  +  VF  +   D + W +M+AGY  + L  EA +
Sbjct: 266 CTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIK 325

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATT---KELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
            F +M   G E    TF  ++  C+ +    E +    + S+V       DH   + ++ 
Sbjct: 326 LFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDH--YSCMVD 383

Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
              +CG + DA ++   M    +   W A++     +G I+L 
Sbjct: 384 LLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVHGNIELG 426



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 17/195 (8%)

Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
            L  +   P     + +I   + PS  +   ++ HA   K+ L     +   LVT Y+K 
Sbjct: 30  HLVRQCATPEAIVSALLIAVNSCPS--ISNCREIHARVFKSLLYRDGFIGDQLVTCYNKL 87

Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR-RQDLEFDGITFIGV 587
           G  E A ++F     +DLVSWNS+I G+++  H   +L  F  M+    ++ + +T + +
Sbjct: 88  GYAEDALKLFDDMPHKDLVSWNSLISGFSRCLHM--SLTAFYTMKFEMSVKPNEVTILSM 145

Query: 588 ITACTHAGLVDEGQ--QYFDIMVNEHHIYPTME--HYSCMVDLYSRAGMLEKAMDIINRM 643
           I+AC   G +D G+    F I V       T+E    + ++++Y ++G L  A  +   +
Sbjct: 146 ISACN--GALDAGKYIHGFGIKVG-----GTLEVKVANSLINMYGKSGDLTSACRLFEAI 198

Query: 644 PFAASATVWRTVLAA 658
           P   + + W +++AA
Sbjct: 199 PDPNTVS-WNSIIAA 212


>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
          Length = 610

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/534 (38%), Positives = 324/534 (60%), Gaps = 22/534 (4%)

Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
           L+  +  CG ++ A ++FS M  +KDV SW  M+SG  +NGA + A   F  M    VR 
Sbjct: 83  LLSCHFACGDIDGARRVFSTM-PVKDVTSWNTMVSGLSKNGASEEAAAMFRIMP---VR- 137

Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV-GTALLNAYVKKGILDEAAKVFELI 439
           N  +++ ++ A            + +   EK+ ++  TA+++ Y+  G + +A + F  +
Sbjct: 138 NAVSWNAMVAALACSGDMGAAEDLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAM 197

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQ 498
             +++V+W+A++AGY +    + A+++++ +  +  V+PN  T SSV+  C+  SA +  
Sbjct: 198 PVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSA-LGF 256

Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
           G+Q H   +K  L+  + V ++L++MY K G++  A +VF     +D+V+WN+MI GYAQ
Sbjct: 257 GRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQ 316

Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
           HG   +A+++F++M+ + +  D IT + V+TAC H GL D G Q F+ M   + I P ++
Sbjct: 317 HGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQID 376

Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISL 664
           HYSCMVDL  RAG+LE+A+++I+ MPF    + + T+L ACR              LI  
Sbjct: 377 HYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQ 436

Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
            P ++  YV L+N+YA    W + +RVR+ M D  V K  GYSW+E+K   + F + D  
Sbjct: 437 DPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRL 496

Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
           HPQ   I+ KL+ L   +K  GY PD  + L D++D  K  +L +HSE+LAIAFGL++T 
Sbjct: 497 HPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTS 556

Query: 785 AGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
            G  L+I KNLR+CGDCH   KLISK+E R+I++RDT RFHHF+ G CSCGDYW
Sbjct: 557 PGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 146/277 (52%), Gaps = 13/277 (4%)

Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
           N L+S +     +  AR VF  M  +D  +WN+MV+G   N    EA   F  M +  A 
Sbjct: 81  NTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNA- 139

Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
               ++ +++   A + ++  A  L     +     D  + T ++  Y   G ++ A + 
Sbjct: 140 ---VSWNAMVAALACSGDMGAAEDLFRNAPEKT---DAILWTAMVSGYMDTGNVQKAMEF 193

Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVS 396
           F  M  ++++VSW A+++G+++N   D A+  F  M  +  V+PN  T S +L     +S
Sbjct: 194 FGAM-PVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLS 252

Query: 397 PF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
                 QVH   +K    ++ +VGT+LL+ Y K G L++A KVF+ +  KDIVAW+AM++
Sbjct: 253 ALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMIS 312

Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
           GYAQ G    A+K++ ++  EGV P+  T  +V+ AC
Sbjct: 313 GYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTAC 349



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 140/276 (50%), Gaps = 11/276 (3%)

Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKP 177
           +L+  +    +++  RRVF  M   +V SW +++SG ++N  ++    +F  M V     
Sbjct: 82  TLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVR---- 137

Query: 178 NSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC-NALISMYLKSKMVRDARAV 236
           N+ +++ ++  LA  G +  A  +     +N  E   ++   A++S Y+ +  V+ A   
Sbjct: 138 NAVSWNAMVAALACSGDMGAAEDL----FRNAPEKTDAILWTAMVSGYMDTGNVQKAMEF 193

Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKE 295
           F  M  R+ ++WN++VAGYV N    +A   F  M      +   ST  SV+  C+    
Sbjct: 194 FGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSA 253

Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
           L   RQ+H   +K  +  +  + T L+  Y KCG + DA K+F  M   KD+V+W AMIS
Sbjct: 254 LGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEM-STKDIVAWNAMIS 312

Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
           G+ Q+G    A+  F +M  EGV P+  T   +LTA
Sbjct: 313 GYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTA 348



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 96/173 (55%), Gaps = 1/173 (0%)

Query: 29  KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKT 87
           +K    F   P RN V +N ++  Y ++S   +AL +F  +    +     STLSSVL  
Sbjct: 188 QKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLG 247

Query: 88  CGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
           C  L    FGRQVH  C+K   +R+V V TSL+ +Y +  ++ D  +VFD+M+  ++V+W
Sbjct: 248 CSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAW 307

Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
            +++SGYA++    + ++LF +M+ EG+ P+  T   VL      G+    +Q
Sbjct: 308 NAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQ 360



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 1/183 (0%)

Query: 112 DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQ 171
           D  + T++V  YM T NV+     F  M   N+VSW ++++GY +N   D  L +F  M 
Sbjct: 170 DAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMV 229

Query: 172 VEGI-KPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
            + I +PN+ T S+VL   ++   +    QVH   +K       +V  +L+SMY K   +
Sbjct: 230 EDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDL 289

Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
            DA  VFD M  +D + WN+M++GY  +   M+A + F  M   G      T ++V+  C
Sbjct: 290 NDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTAC 349

Query: 291 ATT 293
             T
Sbjct: 350 IHT 352



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 40/224 (17%)

Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
           P+  +Y+ +L+   A         +  T   K  +    +++   K G  +EAA +F ++
Sbjct: 75  PDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIM 134

Query: 440 DEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQG 499
             ++ V+W+AM+A  A  GD   A  ++R                      AP       
Sbjct: 135 PVRNAVSWNAMVAALACSGDMGAAEDLFRN---------------------APEK----- 168

Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQH 559
                        +A+ + +A+V+ Y   GN++ A E F     R+LVSWN+++ GY ++
Sbjct: 169 ------------TDAI-LWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKN 215

Query: 560 GHTKKALEVFKEMRRQDL-EFDGITFIGVITACTHAGLVDEGQQ 602
                AL VFK M    + + +  T   V+  C++   +  G+Q
Sbjct: 216 SRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQ 259


>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 224/590 (37%), Positives = 335/590 (56%), Gaps = 33/590 (5%)

Query: 278 LTRSTFVSVIKL-CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
           LT  T ++++   C T  +L    Q+H+ +LK G+  +  I T      S    +  A+ 
Sbjct: 15  LTEQTILTLLNSHCNTLSKLT---QIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATS 71

Query: 337 IF-------SMMREMKDVVSWTAMISGHLQN-GAIDLAVNFFCQMTREGVRPNGFTYSII 388
                    S      D   +  +I  + Q   +   +  F+  M R GV PN FT+  +
Sbjct: 72  FLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFV 131

Query: 389 LTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI--LDEAAKVFELIDEK 442
           L     +   +    VH  ++K  +E+   V   L++ Y   G    + A KVF+   + 
Sbjct: 132 LKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKM 191

Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
           D V WSAM+AG+ ++G +  AV ++R++   GV P+E T  SV++AC A   A+E GK  
Sbjct: 192 DTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSAC-ADLGALELGKWV 250

Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
            +   K  +  ++ + +AL+ M++K GN++ A ++F++   R +VSW S+I G A HG  
Sbjct: 251 ESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRG 310

Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC 622
             A+ +F EM    +  D + FIGV++AC+H+GLVD+G+ YF  M     I P +EHY C
Sbjct: 311 LDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGC 370

Query: 623 MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHD 668
           MVDL  R G +++A + + +MPF  +  +WRT++ AC               LI  +P  
Sbjct: 371 MVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMH 430

Query: 669 SAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQS 728
            + YVLLSN+YA    W+++ +VR++M+ R +KK  G + IEV N+ Y F+AGD SH Q 
Sbjct: 431 ESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQY 490

Query: 729 NQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAP 788
            +IY  ++E+   +K AGY P TS VL DID+E KE  L +HSE+LAIAF L+ TP G  
Sbjct: 491 KEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLNTPPGTS 550

Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
           ++IVKNLRVC DCH+  K ISK+  R+IVVRD NRFHHFK GLCSC D+W
Sbjct: 551 IRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCRDFW 600



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 182/413 (44%), Gaps = 48/413 (11%)

Query: 38  SPQRNFVEYNRLLFEY--CRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV 95
           +P  +   +N L+  Y   RDS     L  +  + R G+     T   VLK C  +    
Sbjct: 84  TPSYDAFLFNTLIRAYSQTRDSKSNSFL-FYRTMLRYGVTPNKFTFPFVLKGCAGIGSLR 142

Query: 96  FGRQVHCECVKSGFARDVNVSTSLVDLY--MRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
            G+ VH   VK GF  DV+V  +L+ +Y  +  +  E   +VFDD  + + V+W+++++G
Sbjct: 143 LGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAG 202

Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
           + R   + R ++LF  MQV G+ P+  T  +VL   AD G +     V + V K      
Sbjct: 203 FVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKS 262

Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
             +CNALI M+ K   V  A  +F  M+ R  ++W S++AG   +   ++A   F+ M  
Sbjct: 263 VELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVE 322

Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
            G       F+ V+  C+           HS ++  G  +               G ME 
Sbjct: 323 NGITPDDVAFIGVLSACS-----------HSGLVDKGRYY--------------FGSME- 356

Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
             + FS++ +   V  +  M+    + G +  A  F  +M  E   PN   +  I+TA  
Sbjct: 357 --RNFSIVPK---VEHYGCMVDLLCRGGFVKEAFEFVQKMPFE---PNQIIWRTIITACH 408

Query: 394 AVSPFQ----VHAHIIKTN--YEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
           A    +    +   +IK+   +E ++ +   L N Y K    ++  KV E++D
Sbjct: 409 ATGELKLGESISKELIKSEPMHESNYVL---LSNIYAKLRQWEKKTKVREMMD 458



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 133/323 (41%), Gaps = 46/323 (14%)

Query: 32  QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
           + +FD SP+ + V ++ ++  + R      A++LF  ++ +G+     T+ SVL  C  L
Sbjct: 182 EKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADL 241

Query: 92  FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
                G+ V     K    + V +  +L+D++ +  NV+   ++F  M+   +VSWTS++
Sbjct: 242 GALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVI 301

Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
           +G A +      + LF  M   GI P+   F   +GVL                      
Sbjct: 302 AGLAMHGRGLDAVSLFDEMVENGITPDDVAF---IGVL---------------------- 336

Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT-----WNSMVAGYVTNELHMEAFE 266
              S C+        S +V   R  F  ME   SI      +  MV          EAFE
Sbjct: 337 ---SACS-------HSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFE 386

Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
               M     ++   T   +I  C  T EL+L   +  +++K+    + N    L   Y+
Sbjct: 387 FVQKMPFEPNQIIWRT---IITACHATGELKLGESISKELIKSEPMHESNY-VLLSNIYA 442

Query: 327 KCGKMEDASKIFSM--MREMKDV 347
           K  + E  +K+  M  MR MK V
Sbjct: 443 KLRQWEKKTKVREMMDMRGMKKV 465


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.134    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,496,469,547
Number of Sequences: 23463169
Number of extensions: 499199594
Number of successful extensions: 1535745
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9468
Number of HSP's successfully gapped in prelim test: 2923
Number of HSP's that attempted gapping in prelim test: 1255082
Number of HSP's gapped (non-prelim): 79391
length of query: 838
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 687
effective length of database: 8,816,256,848
effective search space: 6056768454576
effective search space used: 6056768454576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)