BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046257
(838 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/822 (63%), Positives = 640/822 (77%), Gaps = 15/822 (1%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+LFD+SP R+ Y LLF + RD QEA LFL I RLG+ + S SSVLK L
Sbjct: 47 HNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATL 106
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
D +FGRQ+HC+C+K GF DV+V TSLVD YM+ +N +DGR+VFD+M E NVV+WT+L+
Sbjct: 107 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI 166
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
SGYARN MND VL LF RMQ EG +PNSFTF+ LGVLA+EG+ +QVHT+V+KNG +
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
V N+LI++YLK VR AR +FD E + +TWNSM++GY N L +EA F +M
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
L L+ S+F SVIKLCA KELR QLH V+K G FD NIRT LMVAYSKC M
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
DA ++F + + +VVSWTAMISG LQN + AV+ F +M R+GVRPN FTYS+ILTA
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
P +SP +VHA ++KTNYE+S +VGTALL+AYVK G ++EAAKVF ID+KDIVAWSAML
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
AGYAQ G+TE A+K++ +LT G+KPNEFTFSS++N C A +A++ QGKQFH +IK++L
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
+++LCVSSAL+TMY+KKGNIESA EVFKRQR++DLVSWNSMI GYAQHG KAL+VFKE
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
M+++ ++ DG+TFIGV ACTHAGLV+EG++YFDIMV + I PT EH SCMVDLYSRAG
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSN 677
LEKAM +I MP A +T+WRT+LAACR +I+++P DSA YVLLSN
Sbjct: 647 QLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSN 706
Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
MYA +G WQERA+VRKLMN+R VKKE GYSWIEVKNKTYSFLAGD SHP +QIY KLE+
Sbjct: 707 MYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLED 766
Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
LSTRLKD GY+PDTSYVLQDIDDEHKEA+L+QHSERLAIAFGL+ATP G+PL I+KNLRV
Sbjct: 767 LSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRV 826
Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHF-KEGLCSCGDYW 838
CGDCH VIKLI+K+E R+IVVRD+NRFHHF +G+CSCGD+W
Sbjct: 827 CGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 266 bits (679), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 294/524 (56%), Gaps = 25/524 (4%)
Query: 29 KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
K + +FD +RN V + L+ Y R+S++ E L LF+ ++ G T ++ L
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL--- 201
Query: 89 GCLFDH-VFGR--QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVV 145
G L + V GR QVH VK+G + + VS SL++LY++ NV R +FD +VV
Sbjct: 202 GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 261
Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
+W S++SGYA N ++ L +F+ M++ ++ + +F++V+ + A+ + Q+H V
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 206 IKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTNELHMEA 264
+K G ++ AL+ Y K + DA +F + + ++W +M++G++ N+ EA
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 265 FETFNNM---GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
+ F+ M G+ E T S ++ + + + + ++H+QV+K + + T L
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPS-------EVHAQVVKTNYERSSTVGTAL 434
Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
+ AY K GK+E+A+K+FS + + KD+V+W+AM++G+ Q G + A+ F ++T+ G++PN
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDD-KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 382 GFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
FT+S IL A + Q H IK+ + S V +ALL Y KKG ++ A +VF
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
+ EKD+V+W++M++GYAQ G A+ +++++ VK + TF V ACT + V
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT-HAGLV 612
Query: 497 EQGKQFHACSIK-AKLNNALCVSSALVTMYSKKGNIESASEVFK 539
E+G+++ ++ K+ +S +V +YS+ G +E A +V +
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/589 (28%), Positives = 293/589 (49%), Gaps = 39/589 (6%)
Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA 190
+ +FD + S+ SLL G++R+ LF + G++ + FS+VL V A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
Q+H IK G SV +L+ Y+K +D R VFD M++R+ +TW +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
+++GY N ++ E F M G + TF + + + A Q+H+ V+KNG
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDL-AVNF 369
+D + L+ Y KCG + A +F E+K VV+W +MISG+ NG +DL A+
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKT-EVKSVVTWNSMISGYAANG-LDLEALGM 282
Query: 370 FCQMTREGVR--PNGFTYSIILTAQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVK 425
F M VR + F I L A F Q+H ++K + ++ TAL+ AY K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 426 KGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
+ +A ++F+ I ++V+W+AM++G+ Q E AV ++ ++ +GV+PNEFT+S
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
++ A S + + HA +K + V +AL+ Y K G +E A++VF +
Sbjct: 403 ILTALPVISPS-----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK 457
Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC--THAGLVDEGQQ 602
D+V+W++M+ GYAQ G T+ A+++F E+ + ++ + TF ++ C T+A + +G+Q
Sbjct: 458 DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM-GQGKQ 516
Query: 603 YFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLI 662
+ + + + ++ S ++ +Y++ G +E A ++ R W ++++
Sbjct: 517 FHGFAI-KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISG---- 570
Query: 663 SLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
YA G + V K M RKVK + G ++I V
Sbjct: 571 ----------------YAQHGQAMKALDVFKEMKKRKVKMD-GVTFIGV 602
Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 233/441 (52%), Gaps = 29/441 (6%)
Query: 29 KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
+K + LFD++ ++ V +N ++ Y + L EAL +F +R + L S+ +SV+K C
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 89 GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSW 147
L + F Q+HC VK GF D N+ T+L+ Y + + D R+F ++ NVVSW
Sbjct: 306 ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSW 365
Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
T+++SG+ +N + ++LF M+ +G++PN FT+S +L L V + +VH V+K
Sbjct: 366 TAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVK 421
Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
E ++V AL+ Y+K V +A VF G++D+D + W++M+AGY A +
Sbjct: 422 TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKM 481
Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
F + G + TF S++ +CA T + +Q H +K+ +D + + L+ Y+
Sbjct: 482 FGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 541
Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
K G +E A ++F RE KD+VSW +MISG+ Q+G A++ F +M + V+ +G T+
Sbjct: 542 KKGNIESAEEVFKRQRE-KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600
Query: 387 IILTAQPAVSPFQVHAHIIKTNYEKSFSV-------------GTALLNAYVKKGILDEAA 433
+ A HA +++ EK F + + +++ Y + G L++A
Sbjct: 601 GVFAA-------CTHAGLVEEG-EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652
Query: 434 KVFE-LIDEKDIVAWSAMLAG 453
KV E + + W +LA
Sbjct: 653 KVIENMPNPAGSTIWRTILAA 673
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 231/459 (50%), Gaps = 17/459 (3%)
Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
+ NG V C +S S + +A +FD RD ++ S++ G+ + EA
Sbjct: 22 IYANGVAQVRIYCFGTVS----SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEA 77
Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
F N+ G E+ S F SV+K+ AT + RQLH Q +K G D ++ T L+
Sbjct: 78 KRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDT 137
Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
Y K +D K+F M+E ++VV+WT +ISG+ +N D + F +M EG +PN FT
Sbjct: 138 YMKGSNFKDGRKVFDEMKE-RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFT 196
Query: 385 YSIIL--TAQPAVS--PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
++ L A+ V QVH ++K +K+ V +L+N Y+K G + +A +F+ +
Sbjct: 197 FAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256
Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
K +V W++M++GYA G A+ ++ + V+ +E +F+SVI C A + +
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC-ANLKELRFTE 315
Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
Q H +K + +AL+ YSK + A +FK ++VSW +MI G+ Q+
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 560 GHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEH 619
++A+++F EM+R+ + + T+ ++TA ++ + + ++ + T+
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG- 431
Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
+ ++D Y + G +E+A + + + W +LA
Sbjct: 432 -TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/827 (37%), Positives = 472/827 (57%), Gaps = 25/827 (3%)
Query: 33 SLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
S+F R SP +N +N ++ + ++ L EAL + +R + T SV+K C L
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
FD G V+ + + GF D+ V +LVD+Y R + R+VFD+M ++VSW SL+
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
SGY+ + + LE++H ++ I P+SFT S+VL + +V +H +K+G
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF-NN 270
V V N L++MYLK + DAR VFD M+ RDS+++N+M+ GY+ E+ E+ F N
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299
Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
+ +L T SV++ C ++L LA+ +++ +LK G + +R L+ Y+KCG
Sbjct: 300 LDQFKPDLL--TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGD 357
Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
M A +F+ M E KD VSW ++ISG++Q+G + A+ F M + + TY ++++
Sbjct: 358 MITARDVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Query: 391 AQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
++ + +H++ IK+ SV AL++ Y K G + ++ K+F + D V
Sbjct: 417 VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT 476
Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
W+ +++ + GD +++ Q+ V P+ TF + C A AA GK+ H C
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC-ASLAAKRLGKEIHCCL 535
Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
++ + L + +AL+ MYSK G +E++S VF+R +RD+V+W MI Y +G +KAL
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
E F +M + + D + FI +I AC+H+GLVDEG F+ M + I P +EHY+C+VDL
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIY 672
SR+ + KA + I MP A++W +VL AC R+I L P D
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYS 715
Query: 673 VLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIY 732
+L SN YAA W + + +RK + D+ + K GYSWIEV + F +GD S PQS IY
Sbjct: 716 ILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIY 775
Query: 733 SKLEELSTRLKDAGYKPDTSYVLQDI-DDEHKEAILSQHSERLAIAFGLVATPAGAPLQI 791
LE L + + GY PD V Q++ ++E K ++ HSERLAIAFGL+ T G PLQ+
Sbjct: 776 KSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQV 835
Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
+KNLRVCGDCH V KLISK+ R+I+VRD NRFH FK+G CSC D W
Sbjct: 836 MKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 276/548 (50%), Gaps = 7/548 (1%)
Query: 30 KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
+ + +FD P R+ V +N L+ Y ++EAL ++ ++ + T+SSVL G
Sbjct: 159 RARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFG 218
Query: 90 CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
L G+ +H +KSG V V+ LV +Y++ D RRVFD+M+ + VS+ +
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNT 278
Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
++ GY + +M + + +F ++ KP+ T S+VL ++ A ++ ++K G
Sbjct: 279 MICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
+ ++V N LI +Y K + AR VF+ ME +D+++WNS+++GY+ + MEA + F
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
M + + T++ +I + +L+ + LHS +K+GI D ++ L+ Y+KCG
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCG 457
Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
++ D+ KIFS M D V+W +IS ++ G + QM + V P+ T+ + L
Sbjct: 458 EVGDSLKIFSSM-GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Query: 390 TAQPAVSP----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
+++ ++H +++ YE +G AL+ Y K G L+ +++VFE + +D+V
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576
Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
W+ M+ Y G+ E A++ + + G+ P+ F ++I AC+ E F
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKK 564
K++ + + +V + S+ I A E + K D W S++ G +
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 565 ALEVFKEM 572
A V + +
Sbjct: 697 AERVSRRI 704
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 197/382 (51%), Gaps = 10/382 (2%)
Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
S F+S + +++ L R++H+ V+ G+D L+ YS + + +F
Sbjct: 7 SPFIS--RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64
Query: 341 MREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ- 399
+ K+V W ++I +NG A+ F+ ++ V P+ +T+ ++ A + +
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 400 ---VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
V+ I+ +E VG AL++ Y + G+L A +VF+ + +D+V+W+++++GY+
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
G E A++IY +L + + P+ FT SSV+ A V+QG+ H ++K+ +N+ +
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPA-FGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
V++ LV MY K A VF RD VS+N+MICGY + ++++ +F E Q
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ- 302
Query: 577 LEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKA 636
+ D +T V+ AC H + + ++ M+ + + + ++D+Y++ G + A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR-NILIDVYAKCGDMITA 361
Query: 637 MDIINRMPFAASATVWRTVLAA 658
D+ N M + + W ++++
Sbjct: 362 RDVFNSMECKDTVS-WNSIISG 382
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 535 bits (1378), Expect = e-151, Method: Compositional matrix adjust.
Identities = 288/839 (34%), Positives = 463/839 (55%), Gaps = 36/839 (4%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQ----------------EALNLFLGIRRLGLPLF 77
L D + FV+ R +F+ R H EA+ LF + LG+
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 78 GSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
SSVL C + G Q+H +K GF+ D V +LV LY N+ +F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
+M++ + V++ +L++G ++ ++ +ELF RM ++G++P+S T ++++ + +G +
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
Q+H K G + AL+++Y K + A F E + + WN M+ Y
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
+ +F F M + + T+ S++K C +L L Q+HSQ++K + +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
+ L+ Y+K GK++ A I + KDVVSWT MI+G+ Q D A+ F QM G
Sbjct: 528 CSVLIDMYAKLGKLDTAWDIL-IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 378 VRPN--GFTYSIILTA--QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
+R + G T ++ A Q Q+HA + + AL+ Y + G ++E+
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
FE + D +AW+A+++G+ Q G+ E A++++ ++ EG+ N FTF S + A + +
Sbjct: 647 LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA-ASET 705
Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMI 553
A ++QGKQ HA K ++ V +AL++MY+K G+I A + F ++ VSWN++I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 554 CGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHI 613
Y++HG +AL+ F +M ++ + +T +GV++AC+H GLVD+G YF+ M +E+ +
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 614 YPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC-------------- 659
P EHY C+VD+ +RAG+L +A + I MP A VWRT+L+AC
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 660 RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
L+ L+P DSA YVLLSN+YA + W R R+ M ++ VKKE G SWIEVKN +SF
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945
Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
GD +HP +++I+ ++L+ R + GY D +L ++ E K+ I+ HSE+LAI+FG
Sbjct: 946 VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFG 1005
Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
L++ PA P+ ++KNLRVC DCH IK +SK+ R+I+VRD RFHHF+ G CSC DYW
Sbjct: 1006 LLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/610 (29%), Positives = 308/610 (50%), Gaps = 12/610 (1%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GC 90
+FD P+R +N+++ E +L E LF+ + + T S VL+ C
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 91 LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
FD V Q+H + G V L+DLY R V+ RRVFD + + SW ++
Sbjct: 202 AFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
+SG ++N+ + LF M V GI P + FS+VL + Q+H +V+K G
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
T VCNAL+S+Y + A +F M RD++T+N+++ G +A E F
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
M L G E +T S++ C+ L +QLH+ K G ++ I L+ Y+KC
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
+E A F + E+++VV W M+ + + + F QM E + PN +TY IL
Sbjct: 440 IETALDYF-LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 391 AQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVA 446
+ Q+H+ IIKTN++ + V + L++ Y K G LD A + KD+V+
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
W+ M+AGY Q + A+ +RQ+ G++ +E ++ ++AC A A+++G+Q HA +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC-AGLQALKEGQQIHAQA 617
Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
+ ++ L +ALVT+YS+ G IE + F++ D ++WN+++ G+ Q G+ ++AL
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
VF M R+ ++ + TF + A + + +G+Q ++ + T E + ++ +
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET-EVCNALISM 736
Query: 627 YSRAGMLEKA 636
Y++ G + A
Sbjct: 737 YAKCGSISDA 746
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/561 (30%), Positives = 275/561 (49%), Gaps = 11/561 (1%)
Query: 81 LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
L LKT G L + GR++H + +K G + +S L D Y+ ++ +VFD+M
Sbjct: 91 LEGCLKTNGSLDE---GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP 147
Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV- 199
E + +W ++ A + V LF RM E + PN TFS VL + V
Sbjct: 148 ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE 207
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
Q+H ++ G T VCN LI +Y ++ V AR VFDG+ +D +W +M++G NE
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
EA F +M + G T F SV+ C + L + QLH VLK G D +
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
L+ Y G + A IFS M + +D V++ +I+G Q G + A+ F +M +G+
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
P+ T + ++ A A Q+HA+ K + + + ALLN Y K ++ A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
F + +++V W+ ML Y + D + +I+RQ+ E + PN++T+ S++ C
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL-GD 505
Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
+E G+Q H+ IK V S L+ MY+K G +++A ++ R +D+VSW +MI G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
Y Q+ KAL F++M + + D + ++AC + EGQQ
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSS 624
Query: 616 TMEHYSCMVDLYSRAGMLEKA 636
+ + +V LYSR G +E++
Sbjct: 625 DLPFQNALVTLYSRCGKIEES 645
Score = 226 bits (577), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 257/541 (47%), Gaps = 22/541 (4%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--- 88
+ +F QR+ V YN L+ + ++A+ LF + GL +TL+S++ C
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 89 GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
G LF G+Q+H K GFA + + +L++LY + ++E F + NVV W
Sbjct: 403 GTLFR---GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
+L Y +F +MQ+E I PN +T+ ++L G + Q+H+ +IK
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
++ VC+ LI MY K + A + +D ++W +M+AGY +A TF
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
M G + + CA + L+ +Q+H+Q +G D + L+ YS+C
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
GK+E++ F E D ++W A++SG Q+G + A+ F +M REG+ N FT+
Sbjct: 640 GKIEESYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698
Query: 389 LTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDI 444
+ A + QVHA I KT Y+ V AL++ Y K G + +A K F + K+
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 445 VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHA 504
V+W+A++ Y++ G A+ + Q+ V+PN T V++AC+ V++G +
Sbjct: 759 VSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI-GLVDKGIAYFE 817
Query: 505 C-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQ 558
+ K + +CV V M ++ G + A E + K D + W +++
Sbjct: 818 SMNSEYGLSPKPEHYVCV----VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 873
Query: 559 H 559
H
Sbjct: 874 H 874
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 41/305 (13%)
Query: 377 GVRPNGFTYSIIL-----TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDE 431
G+RPN T +L T ++H+ I+K + + + L + Y+ KG L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 432 AAKVFELIDEKDIVAWSAM---LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
A KVF+ + E+ I W+ M LA IG+ G ++ ++ SE V PNE TFS V+ A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFG---LFVRMVSENVTPNEGTFSGVLEA 195
Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS 548
C S A + +Q HA + L ++ V + L+ +YS+ G ++ A VF R +D S
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ------ 602
W +MI G +++ +A+ +F +M + F V++AC ++ G+Q
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 603 -----------------YFDI--MVNEHHIYPTMEH-----YSCMVDLYSRAGMLEKAMD 638
YF + +++ HI+ M Y+ +++ S+ G EKAM+
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 639 IINRM 643
+ RM
Sbjct: 376 LFKRM 380
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 12/178 (6%)
Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
+ G++PN T ++ C + ++++G++ H+ +K L++ C+S L Y KG++
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
A +VF +R + +WN MI A + +F M +++ + TF GV+ AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 592 THAGLVDEGQQYFDIMVNEHH--IYPTMEHYSC----MVDLYSRAGMLEKAMDIINRM 643
G FD++ H +Y + + ++DLYSR G ++ A + + +
Sbjct: 197 RG------GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust.
Identities = 272/757 (35%), Positives = 437/757 (57%), Gaps = 19/757 (2%)
Query: 99 QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
Q H + + GF D+++ T L + R +F + +V + L+ G++ N+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 159 MNDRVLELF-HRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
L +F H + +KPNS T++ + + +H + +G + +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGA 276
+ ++ MY K V DAR VFD M ++D+I WN+M++GY NE+++E+ + F ++ +
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
L +T + ++ A +ELRL Q+HS K G + TG + YSKCGK++ S
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY-SIILTAQPAV 395
+F R+ D+V++ AMI G+ NG +L+++ F ++ G R T S++ + +
Sbjct: 278 LFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYA 455
+ +H + +K+N+ SV TAL Y K ++ A K+F+ EK + +W+AM++GY
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 456 QIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNAL 515
Q G TE A+ ++R++ PN T + +++AC A A+ GK H +++
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSAC-AQLGALSLGKWVHDLVRSTDFESSI 455
Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
VS+AL+ MY+K G+I A +F K++ V+WN+MI GY HG ++AL +F EM
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
+ +TF+ V+ AC+HAGLV EG + F+ M++ + P+++HY+CMVD+ RAG L++
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 636 AMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAA 681
A+ I M ++VW T+L ACR L L P + +VLLSN+++A
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635
Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
++ + A VR+ RK+ K GY+ IE+ + F +GD SHPQ +IY KLE+L +
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGK 695
Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
+++AGY+P+T L D+++E +E ++ HSERLAIAFGL+AT G ++I+KNLRVC DC
Sbjct: 696 MREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDC 755
Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
HTV KLISK+ R IVVRD NRFHHFK+G+CSCGDYW
Sbjct: 756 HTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 209 bits (532), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 247/495 (49%), Gaps = 10/495 (2%)
Query: 46 YNRLLFEYCRDSLHQEALNLFLGIRR-LGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCEC 104
+N L+ + + +L++F +R+ L ST + + D GR +H +
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 105 VKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVL 164
V G ++ + +++V +Y + VED R+VFD M E + + W +++SGY +N+M +
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 165 ELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
++F + E + ++ T +L +A+ + +Q+H++ K G V IS+
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265
Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
Y K ++ A+F D + +N+M+ GY +N + F + L+GA L ST
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
VS++ + + L L +H LK+ ++ T L YSK ++E A K+F E
Sbjct: 326 VSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---- 399
K + SW AMISG+ QNG + A++ F +M + PN T + IL+A +
Sbjct: 383 -KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW 441
Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
VH + T++E S V TAL+ Y K G + EA ++F+L+ +K+ V W+ M++GY G
Sbjct: 442 VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQ 501
Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
+ A+ I+ ++ + G+ P TF V+ AC+ E + F++ + ++ +
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 520 ALVTMYSKKGNIESA 534
+V + + G+++ A
Sbjct: 562 CMVDILGRAGHLQRA 576
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 178/368 (48%), Gaps = 6/368 (1%)
Query: 26 FYSKKD-QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSS 83
F+ +D + +FDR P+++ + +N ++ Y ++ ++ E++ +F I L +TL
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 84 VLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESN 143
+L L + G Q+H K+G V T + LY + ++ G +F + + +
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT 203
+V++ +++ GY N + L LF + + G + S ST++ ++ G + +H
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS---STLVSLVPVSGHLMLIYAIHG 343
Query: 204 MVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
+K+ SV AL ++Y K + AR +FD ++ +WN+M++GY N L +
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMV 323
A F M + T ++ CA L L + +H V + + T L+
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 324 AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGF 383
Y+KCG + +A ++F +M + K+ V+W MISG+ +G A+N F +M G+ P
Sbjct: 464 MYAKCGSIAEARRLFDLMTK-KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPV 522
Query: 384 TYSIILTA 391
T+ +L A
Sbjct: 523 TFLCVLYA 530
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 3/263 (1%)
Query: 29 KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
K +LF + + V YN ++ Y + + +L+LF + G L STL S++
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 89 GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
G L + +H C+KS F +VST+L +Y + N +E R++FD+ E ++ SW
Sbjct: 333 GHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
+++SGY +N + + + LF MQ PN T + +L A G ++ VH +V
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
E V ALI MY K + +AR +FD M ++ +TWN+M++GY + EA F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
Query: 269 NNMGLAGAELTRSTFVSVIKLCA 291
M +G T TF+ V+ C+
Sbjct: 510 YEMLNSGITPTPVTFLCVLYACS 532
Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 92/179 (51%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ LFD SP+++ +N ++ Y ++ L ++A++LF +++ T++ +L C L
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
G+ VH + F + VST+L+ +Y + ++ + RR+FD M + N V+W +++
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
SGY + L +F+ M GI P TF VL + G+V ++ +I G
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYG 552
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
S ++ Q HA I N + + + L S G I A ++F ++ D+ +N +
Sbjct: 30 STSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVL 89
Query: 553 ICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACT-----HAGLVDEGQQYFDI 606
+ G++ + +L VF +R+ DL+ + T+ I+A + AG V GQ D
Sbjct: 90 MRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG 149
Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR 660
+E + S +V +Y + +E A + +RMP +W T+++ R
Sbjct: 150 CDSE------LLLGSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYR 196
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust.
Identities = 307/830 (36%), Positives = 469/830 (56%), Gaps = 35/830 (4%)
Query: 41 RNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF--DHVFGR 98
+N V +N ++ Y + + A +F ++ G T S++ T L D
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 99 QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
Q+ C KSG D+ V + LV + ++ ++ R+VF+ M N V+ L+ G R K
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 159 MNDRVLELFHRMQ-VEGIKPNSFTF---STVLGVLADEGIVATAVQVHTMVIKNG-GEVV 213
+ +LF M + + P S+ S LA+E + +VH VI G + +
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348
Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
+ N L++MY K + DAR VF M D+DS++WNSM+ G N +EA E + +M
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
T +S + CA+ K +L +Q+H + LK GID + ++ LM Y++ G + +
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNE 468
Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDL--AVNFFCQMTREGVRPNGFTYSIILTA 391
KIFS M E D VSW ++I G L L AV F R G + N T+S +L+A
Sbjct: 469 CRKIFSSMPE-HDQVSWNSII-GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 392 QPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVA 446
++S Q+H +K N + AL+ Y K G +D K+F + + +D V
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 447 WSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACS 506
W++M++GY A+ + + G + + F +++V++A A A +E+G + HACS
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA-FASVATLERGMEVHACS 645
Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKAL 566
++A L + + V SALV MYSK G ++ A F R+ SWNSMI GYA+HG ++AL
Sbjct: 646 VRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEAL 705
Query: 567 EVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
++F+ M+ D +TF+GV++AC+HAGL++EG ++F+ M + + + P +EH+SCM D
Sbjct: 706 KLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMAD 765
Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC----------------RLISLQPHDS 669
+ RAG L+K D I +MP + +WRTVL AC L L+P ++
Sbjct: 766 VLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENA 825
Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
YVLL NMYAA G W++ + RK M D VKKEAGYSW+ +K+ + F+AGD SHP ++
Sbjct: 826 VNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDAD 885
Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGA-P 788
IY KL+EL+ +++DAGY P T + L D++ E+KE ILS HSE+LA+AF L A + P
Sbjct: 886 VIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLP 945
Query: 789 LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
++I+KNLRVCGDCH+ K ISK+E R I++RD+NRFHHF++G CSC D+W
Sbjct: 946 IRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 239 bits (611), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 186/648 (28%), Positives = 316/648 (48%), Gaps = 30/648 (4%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +FD P RN V + ++ Y R+ H+EAL + + G+ SVL+ C +
Sbjct: 56 RKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEI 115
Query: 92 --FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR-TNNVEDGRRVFDDMNESNVVSWT 148
+FGRQ+H K +A D VS L+ +Y + +V F D+ N VSW
Sbjct: 116 GSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWN 175
Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD--EGIVATAVQVHTMVI 206
S++S Y++ +F MQ +G +P +TF +++ E V Q+ +
Sbjct: 176 SIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ 235
Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
K+G V + L+S + KS + AR VF+ ME R+++T N ++ G V + EA +
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 267 TFNNMGLAGAELTRSTFVSVIK-----LCATTKELRLARQLHSQVLKNG-IDFDHNIRTG 320
F +M + +++ ++V ++ A L+ R++H V+ G +DF I G
Sbjct: 296 LFMDMN-SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
L+ Y+KCG + DA ++F M + KD VSW +MI+G QNG AV + M R + P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 381 NGFTYSIILTAQPAVS----PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
FT L++ ++ Q+H +K + + SV AL+ Y + G L+E K+F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 437 ELIDEKDIVAWSAMLAGYAQIGDT-EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
+ E D V+W++++ A+ + AV + G K N TFSSV++A ++ S
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533
Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQ-RKRDLVSWNSMIC 554
E GKQ H ++K + + +AL+ Y K G ++ ++F R +RD V+WNSMI
Sbjct: 534 -ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592
Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
GY + KAL++ M + D + V++A ++ G + V+ +
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGME-----VHACSVR 647
Query: 615 PTMEH----YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
+E S +VD+YS+ G L+ A+ N MP S + W ++++
Sbjct: 648 ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISG 694
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/578 (28%), Positives = 289/578 (50%), Gaps = 22/578 (3%)
Query: 98 RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
R H K+ +DV + +L++ Y+ T + R+VFD+M N VSW ++SGY+RN
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT--AVQVHTMVIKNGGEVVTS 215
+ L M EGI N + F +VL + G V Q+H ++ K V
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 216 VCNALISMYLKS-KMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
V N LISMY K V A F +E ++S++WNS+++ Y AF F++M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 275 GAELTRSTFVSVIKL-CATTK-ELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
G+ T TF S++ C+ T+ ++RL Q+ + K+G+ D + +GL+ A++K G +
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIILTA 391
A K+F+ M E ++ V+ ++ G ++ + A F M V P +Y I+L++
Sbjct: 261 YARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSS 317
Query: 392 QPAVS---------PFQVHAHIIKTNY-EKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
P S +VH H+I T + +G L+N Y K G + +A +VF + +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
KD V+W++M+ G Q G AV+ Y+ + + P FT S +++C + A + G+Q
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA-KLGQQ 436
Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
H S+K ++ + VS+AL+T+Y++ G + ++F + D VSWNS+I A+
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496
Query: 562 T-KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
+ +A+ F +R + + ITF V++A + + G+Q + + +++I
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL-KNNIADEATTE 555
Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
+ ++ Y + G ++ I +RM W ++++
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 32 QSLFDR-SPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
+ +F R + +R+ V +N ++ Y + L +AL+L + + G L ++VL
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 91 LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
+ G +VH V++ DV V ++LVD+Y + ++ R F+ M N SW S+
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691
Query: 151 LSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIV 195
+SGYAR+ + L+LF M+++G P+ TF VL + G++
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 301/829 (36%), Positives = 466/829 (56%), Gaps = 54/829 (6%)
Query: 29 KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
K+ + LF+ P R+ V +N +L Y +EA++L GL TL
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLR------ 250
Query: 89 GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
L + G VKS FA N ++S+ ++ R
Sbjct: 251 --LLARISGDDSDAGQVKS-FANG-NDASSVSEIIFRNKG-------------------- 286
Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
LS Y + +L+ F M ++ + TF +L +A QVH M +K
Sbjct: 287 --LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKL 344
Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
G +++ +V N+LI+MY K + AR VFD M +RD I+WNS++AG N L +EA F
Sbjct: 345 GLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLF 404
Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKE-LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
+ G + + T SV+K ++ E L L++Q+H +K D + T L+ AYS+
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
M++A +F R D+V+W AM++G+ Q+ + F M ++G R + FT +
Sbjct: 465 NRCMKEAEILFE--RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
+ + QVHA+ IK+ Y+ V + +L+ YVK G + A F+ I D
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFH 503
VAW+ M++G + G+ E A ++ Q+ GV P+EFT +++ A + +A +EQG+Q H
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA-LEQGRQIH 641
Query: 504 ACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTK 563
A ++K N V ++LV MY+K G+I+ A +FKR ++ +WN+M+ G AQHG K
Sbjct: 642 ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGK 701
Query: 564 KALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCM 623
+ L++FK+M+ ++ D +TFIGV++AC+H+GLV E ++ M ++ I P +EHYSC+
Sbjct: 702 ETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCL 761
Query: 624 VDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDS 669
D RAG++++A ++I M ASA+++RT+LAACR L+ L+P DS
Sbjct: 762 ADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDS 821
Query: 670 AIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSN 729
+ YVLLSNMYAA W E R +M KVKK+ G+SWIEVKNK + F+ D S+ Q+
Sbjct: 822 SAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTE 881
Query: 730 QIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPL 789
IY K++++ +K GY P+T + L D+++E KE L HSE+LA+AFGL++TP P+
Sbjct: 882 LIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPI 941
Query: 790 QIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
+++KNLRVCGDCH +K I+K+ R+IV+RD NRFH FK+G+CSCGDYW
Sbjct: 942 RVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 173/638 (27%), Positives = 300/638 (47%), Gaps = 53/638 (8%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLH-----QEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
+FD+ P R+ V +N +L Y + S Q+A LF +R+ + TLS +LK C
Sbjct: 96 VFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLC 155
Query: 89 GCLFDHVFGRQ-VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
+V+ + H K G D V+ +LV++Y++ V++G+ +F++M +VV W
Sbjct: 156 -LHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
+L Y + ++L G+ PN T + + D+ + A QV +
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDD---SDAGQVKSFANG 271
Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
N V+ + I N ++ Y+ + + +
Sbjct: 272 NDASSVSEI-----------------------------IFRNKGLSEYLHSGQYSALLKC 302
Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSK 327
F +M + E + TF+ ++ L L +Q+H LK G+D + L+ Y K
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 328 CGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
K A +F M E +D++SW ++I+G QNG AV F Q+ R G++P+ +T +
Sbjct: 363 LRKFGFARTVFDNMSE-RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 388 ILTAQPAVSPF-----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
+L A ++ QVH H IK N V TAL++AY + + EA +FE
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNF 480
Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
D+VAW+AM+AGY Q D +K++ + +G + ++FT ++V C A+ QGKQ
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC-GFLFAINQGKQV 539
Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
HA +IK+ + L VSS ++ MY K G++ +A F D V+W +MI G ++G
Sbjct: 540 HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEE 599
Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-- 620
++A VF +MR + D T + A + +++G+Q I N + T + +
Sbjct: 600 ERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ---IHANALKLNCTNDPFVG 656
Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
+ +VD+Y++ G ++ A + R+ + T W +L
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVG 693
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 259/563 (46%), Gaps = 69/563 (12%)
Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE-------LFHRM 170
+L+ +Y + ++ RRVFD M + ++VSW S+L+ YA++ ++ V+E LF +
Sbjct: 79 NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQS--SECVVENIQQAFLLFRIL 136
Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
+ + + + T S +L + G V + H K G + V AL+++YLK V
Sbjct: 137 RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKV 196
Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE---TFNNMGLAGAELTRSTFVSVI 287
++ + +F+ M RD + WN M+ Y+ EA + F++ GL E+T
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT-------- 248
Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
LRL ++ +G D D G + +++ DAS + ++
Sbjct: 249 --------LRLLARI------SGDDSD----AGQVKSFANGN---DASSV-------SEI 280
Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
+ +S +L +G + F M V + T+ ++L V QVH
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
+K + +V +L+N Y K A VF+ + E+D+++W++++AG AQ G A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVT 523
V ++ QL G+KP+++T +SV+ A ++ + KQ H +IK + VS+AL+
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID 460
Query: 524 MYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGIT 583
YS+ ++ A +F+R DLV+WN+M+ GY Q K L++F M +Q D T
Sbjct: 461 AYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 584 FIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY-------SCMVDLYSRAGMLEKA 636
V C +++G+Q H Y Y S ++D+Y + G + A
Sbjct: 520 LATVFKTCGFLFAINQGKQV--------HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 637 MDIINRMPFAASATVWRTVLAAC 659
+ +P W T+++ C
Sbjct: 572 QFAFDSIP-VPDDVAWTTMISGC 593
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 205/459 (44%), Gaps = 47/459 (10%)
Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN-----ELHMEAFETFNNMG 272
N LISMY K + AR VFD M DRD ++WNS++A Y + E +AF F +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
+R T ++KLC + + + H K G+D D + L+ Y K GK++
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ 392
+ +F M +DVV W M+ +L+ G + A++ G+ PN T ++
Sbjct: 198 EGKVLFEEM-PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA--- 253
Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
++ KSF+ G ++A+ V E+I + L+
Sbjct: 254 ------RISGDDSDAGQVKSFANG-------------NDASSVSEIIFR------NKGLS 288
Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
Y G +K + + V+ ++ TF ++ A ++ G+Q H ++K L+
Sbjct: 289 EYLHSGQYSALLKCFADMVESDVECDQVTFILML-ATAVKVDSLALGQQVHCMALKLGLD 347
Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
L VS++L+ MY K A VF +RDL+SWNS+I G AQ+G +A+ +F ++
Sbjct: 348 LMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL 407
Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYF-DIMVNEHHIYPTMEHY--SCMVDLYSR 629
R L+ D T V+ A A + EG + V+ I + + + ++D YSR
Sbjct: 408 LRCGLKPDQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHD 668
+++A + R F A W ++A Q HD
Sbjct: 465 NRCMKEAEILFERHNFDLVA--WNAMMAG----YTQSHD 497
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 43/320 (13%)
Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
T+ +L L + H+++L + + + L+ YSKCG + A ++F M + +D+VSW
Sbjct: 51 TSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-RDLVSWN 109
Query: 352 AMISGHLQNGA-----IDLAVNFFCQMTREGVRPNGFTYS----IILTAQPAVSPFQVHA 402
++++ + Q+ I A F + ++ V + T S + L + + H
Sbjct: 110 SILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHG 169
Query: 403 HIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEG 462
+ K + V AL+N Y+K G + E +FE + +D+V W+ ML Y ++G E
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 229
Query: 463 AVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALV 522
A+ + S G+ PNE T + A G A +K+
Sbjct: 230 AIDLSSAFHSSGLNPNEITLRLL---------ARISGDDSDAGQVKS------------- 267
Query: 523 TMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
++ + S SE+ R N + Y G L+ F +M D+E D +
Sbjct: 268 --FANGNDASSVSEIIFR---------NKGLSEYLHSGQYSALLKCFADMVESDVECDQV 316
Query: 583 TFIGVITACTHAGLVDEGQQ 602
TFI ++ + GQQ
Sbjct: 317 TFILMLATAVKVDSLALGQQ 336
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/669 (40%), Positives = 404/669 (60%), Gaps = 49/669 (7%)
Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA-GA 276
N L+ Y K+ ++ + + F+ + DRD +TWN ++ GY + L A + +N M A
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
LTR T ++++KL ++ + L +Q+H QV+K G + + + L+ Y+ G + DA K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 337 IF----------------------------SMMREM-KDVVSWTAMISGHLQNGAIDLAV 367
+F + R M KD VSW AMI G QNG A+
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAY 423
F +M +G++ + + + +L A + Q+HA II+TN++ VG+AL++ Y
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFS 483
K L A VF+ + +K++V+W+AM+ GY Q G E AVKI+ + G+ P+ +T
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 484 SVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK 543
I+AC A +++E+G QFH +I + L + + VS++LVT+Y K G+I+ ++ +F
Sbjct: 376 QAISAC-ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
RD VSW +M+ YAQ G + +++F +M + L+ DG+T GVI+AC+ AGLV++GQ+Y
Sbjct: 435 RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY 494
Query: 604 FDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--- 660
F +M +E+ I P++ HYSCM+DL+SR+G LE+AM IN MPF A W T+L+ACR
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 661 -----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWI 709
LI L PH A Y LLS++YA+ G W A++R+ M ++ VKKE G SWI
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Query: 710 EVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
+ K K +SF A D S P +QIY+KLEEL+ ++ D GYKPDTS+V D+++ K +L+
Sbjct: 615 KWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNY 674
Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
HSERLAIAFGL+ P+G P+++ KNLRVC DCH K IS + R+I+VRD RFH FK+
Sbjct: 675 HSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKD 734
Query: 830 GLCSCGDYW 838
G CSCGD+W
Sbjct: 735 GTCSCGDFW 743
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 240/515 (46%), Gaps = 48/515 (9%)
Query: 118 SLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVE-GIK 176
+L+ Y + + + F+ + + + V+W L+ GY+ + + ++ ++ M +
Sbjct: 77 NLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSAN 136
Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
T T+L + + G V+ Q+H VIK G E V + L+ MY + DA+ V
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196
Query: 237 FDGMEDR------------------------------DSITWNSMVAGYVTNELHMEAFE 266
F G++DR DS++W +M+ G N L EA E
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
F M + G ++ + F SV+ C + +Q+H+ +++ + + L+ Y
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
KC + A +F M++ K+VVSWTAM+ G+ Q G + AV F M R G+ P+ +T
Sbjct: 317 KCKCLHYAKTVFDRMKQ-KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLG 375
Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
++A VS Q H I + +V +L+ Y K G +D++ ++F ++ +
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ- 501
D V+W+AM++ YAQ G ++++ ++ G+KP+ T + VI+AC+ + VE+G++
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR-AGLVEKGQRY 494
Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHG 560
F + + + ++ S ++ ++S+ G +E A D + W +++ G
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 561 HTKKALEVFKEMRRQDLEFD-----GITFIGVITA 590
+ LE+ K +E D G T + I A
Sbjct: 555 N----LEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 220/467 (47%), Gaps = 38/467 (8%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGC 90
+S F++ P R+ V +N L+ Y L A+ + +R L TL ++LK
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 91 LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVF---DDMN------- 140
G+Q+H + +K GF + V + L+ +Y + D ++VF DD N
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 141 --------------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSF 180
E + VSW +++ G A+N + +E F M+V+G+K + +
Sbjct: 212 MGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 181 TFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGM 240
F +VL G + Q+H +I+ + V +ALI MY K K + A+ VFD M
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
Query: 241 EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
+ ++ ++W +MV GY EA + F +M +G + T I CA L
Sbjct: 332 KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGS 391
Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
Q H + + +G+ + L+ Y KCG ++D++++F+ M ++D VSWTAM+S + Q
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQF 450
Query: 361 GAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHIIKTNYEKSFSVG- 416
G + F +M + G++P+G T + +++A V Q + ++ + Y S+G
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 417 -TALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTE 461
+ +++ + + G L+EA + + D + W+ +L+ G+ E
Sbjct: 511 YSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 160/331 (48%), Gaps = 1/331 (0%)
Query: 37 RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
R +++ V + ++ ++ L +EA+ F ++ GL + SVL CG L
Sbjct: 229 RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 97 GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
G+Q+H +++ F + V ++L+D+Y + + + VFD M + NVVSWT+++ GY +
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
+ +++F MQ GI P+ +T + A+ + Q H I +G +V
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
N+L+++Y K + D+ +F+ M RD+++W +MV+ Y +E + F+ M G
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 277 ELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
+ T VI C+ + + R + GI + ++ +S+ G++E+A
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
+ + M D + WT ++S G +++
Sbjct: 529 RFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust.
Identities = 287/803 (35%), Positives = 462/803 (57%), Gaps = 40/803 (4%)
Query: 68 GIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN 127
GIR P+ T SS+LK+C D G+ VH ++ D + SL+ LY ++
Sbjct: 56 GIR----PMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 128 NVEDGRRVFDDM---NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
+ VF+ M + +VVSW+++++ Y N +++F G+ PN + ++
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 185 VLGVLADEGIVATAVQVHTMVIKNGG-EVVTSVCNALISMYLKSK-MVRDARAVFDGMED 242
V+ ++ V ++K G E V +LI M++K + +A VFD M +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
+ +TW M+ + EA F +M L+G E + T SV CA + L L +QL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKC---GKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
HS +++G+ D + L+ Y+KC G ++D K+F M E V+SWTA+I+G+++
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMK 348
Query: 360 NGAIDL-AVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSF---- 413
N + A+N F +M +G V PN FT+S A +S +V ++ +++
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
SV ++++ +VK +++A + FE + EK++V+++ L G + + E A K+ ++T
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
+ + FTF+S+++ A ++ +G+Q H+ +K L+ V +AL++MYSK G+I++
Sbjct: 469 ELGVSAFTFASLLSG-VANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTH 593
AS VF R+++SW SMI G+A+HG + LE F +M + ++ + +T++ +++AC+H
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 594 AGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWR 653
GLV EG ++F+ M +H I P MEHY+CMVDL RAG+L A + IN MPF A VWR
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 654 TVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRK 699
T L ACR ++ L P++ A Y+ LSN+YA G W+E +R+ M +R
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 700 VKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDID 759
+ KE G SWIEV +K + F GD +HP ++QIY +L+ L T +K GY PDT VL ++
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLE 767
Query: 760 DEHKEA----ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
+E+ EA +L QHSE++A+AFGL++T P+++ KNLRVCGDCH +K IS + R+
Sbjct: 768 EENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGRE 827
Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
IV+RD NRFHHFK+G CSC DYW
Sbjct: 828 IVLRDLNRFHHFKDGKCSCNDYW 850
Score = 219 bits (557), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/572 (26%), Positives = 285/572 (49%), Gaps = 30/572 (5%)
Query: 28 SKKDQSLFD---RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
S K + +F+ R +R+ V ++ ++ Y + +A+ +F+ LGL ++V
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172
Query: 85 LKTCGCLFDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMR-TNNVEDGRRVFDDMNES 142
++ C GR +K+G F DV V SL+D++++ N+ E+ +VFD M+E
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232
Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
NVV+WT +++ + + F M + G + + FT S+V A+ ++ Q+H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKM---VRDARAVFDGMEDRDSITWNSMVAGYVTN- 258
+ I++G +V V +L+ MY K V D R VFD MED ++W +++ GY+ N
Sbjct: 293 SWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNC 350
Query: 259 ELHMEAFETFNNMGLAG-AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
L EA F+ M G E TF S K C + R+ +Q+ Q K G+ + ++
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSV 410
Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
++ + K +MEDA + F + E K++VS+ + G +N + A ++T
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSE-KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
+ + FT++ +L+ V Q+H+ ++K + V AL++ Y K G +D A+
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
+VF ++ +++++W++M+ G+A+ G ++ + Q+ EGVKPNE T+ ++++AC+
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Query: 494 AAVEQGKQFHAC----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVS 548
E + F++ IK K+ + C +V + + G + A E + D++
Sbjct: 590 LVSEGWRHFNSMYEDHKIKPKMEHYAC----MVDLLCRAGLLTDAFEFINTMPFQADVLV 645
Query: 549 WNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
W + + H +T E+ K R+ LE D
Sbjct: 646 WRTFLGACRVHSNT----ELGKLAARKILELD 673
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 256/532 (48%), Gaps = 65/532 (12%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
+FD+ + N V + ++ + +EA+ FL + G TLSSV C L +
Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELEN 284
Query: 94 HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTN---NVEDGRRVFDDMNESNVVSWTSL 150
G+Q+H ++SG DV SLVD+Y + + +V+D R+VFD M + +V+SWT+L
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 151 LSGYARN-KMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
++GY +N + + LF M +G ++PN FTFS+ + QV K
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
G +SV N++ISM++KS + DA+ F+ + +++ +++N+ + G N +AF+
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
+ + ++ TF S++ A +R Q+HSQV+K G+ + + L+ YSKC
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
G ++ AS++F+ M E ++V+SWT+MI+G ++G + F QM EGV+PN TY I
Sbjct: 523 GSIDTASRVFNFM-ENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581
Query: 389 LTAQPAVSPFQ---------VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELI 439
L+A V H IK E +++ + G+L +A FE I
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY----ACMVDLLCRAGLLTDA---FEFI 634
Query: 440 D----EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
+ + D++ W L +TE R++ + PNE P+A
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNE------------PAAY 680
Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLV 547
++ L +Y+ G E ++E+ ++ ++R+LV
Sbjct: 681 IQ-----------------------LSNIYACAGKWEESTEMRRKMKERNLV 709
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 151/305 (49%), Gaps = 19/305 (6%)
Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRP-NGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
+I HL G + AV+ M R+G+RP + T+S +L + F+ VHA +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELI---DEKDIVAWSAMLAGYAQIGDTEGAV 464
+ E + +L++ Y K G +A VFE + ++D+V+WSAM+A Y G A+
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 465 KIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK-AKLNNALCVSSALVT 523
K++ + G+ PN++ +++VI AC+ S V G+ +K + +CV +L+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACS-NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210
Query: 524 MYSKKGN-IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGI 582
M+ K N E+A +VF + + ++V+W MI Q G ++A+ F +M E D
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 583 TFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSC-MVDLYSRA---GMLEKAMD 638
T V +AC + G+Q + + + C +VD+Y++ G ++
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLV----DDVECSLVDMYAKCSADGSVDDCRK 326
Query: 639 IINRM 643
+ +RM
Sbjct: 327 VFDRM 331
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 515 bits (1326), Expect = e-145, Method: Compositional matrix adjust.
Identities = 276/759 (36%), Positives = 441/759 (58%), Gaps = 21/759 (2%)
Query: 98 RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
RQ+ K+G ++ T LV L+ R +V++ RVF+ ++ V + ++L G+A+
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
D+ L+ F RM+ + ++P + F+ +L V DE + ++H +++K+G +
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
L +MY K + V +AR VFD M +RD ++WN++VAGY N + A E +M +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
+ T VSV+ + + + + +++H +++G D NI T L+ Y+KCG +E A ++
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
F M E ++VVSW +MI ++QN A+ F +M EGV+P + L A +
Sbjct: 294 FDGMLE-RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 352
Query: 398 FQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
+ +H ++ +++ SV +L++ Y K +D AA +F + + +V+W+AM+ G
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
+AQ G A+ + Q+ S VKP+ FT+ SVI A A + K H +++ L+
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA-IAELSITHHAKWIHGVVMRSCLDK 471
Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
+ V++ALV MY+K G I A +F +R + +WN+MI GY HG K ALE+F+EM+
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQ 531
Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
+ ++ +G+TF+ VI+AC+H+GLV+ G + F +M + I +M+HY MVDL RAG L
Sbjct: 532 KGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591
Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
+A D I +MP + V+ +L AC RL L P D +VLL+N+Y
Sbjct: 592 NEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIY 651
Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
A W++ +VR M + ++K G S +E+KN+ +SF +G +HP S +IY+ LE+L
Sbjct: 652 RAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLI 711
Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
+K+AGY PDT+ VL ++++ KE +LS HSE+LAI+FGL+ T AG + + KNLRVC
Sbjct: 712 CHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCA 770
Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
DCH K IS + R+IVVRD RFHHFK G CSCGDYW
Sbjct: 771 DCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 256 bits (653), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 279/523 (53%), Gaps = 13/523 (2%)
Query: 44 VEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCE 103
V Y+ +L + + S +AL F+ +R + + +LK CG + G+++H
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 104 CVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
VKSGF+ D+ T L ++Y + V + R+VFD M E ++VSW ++++GY++N M
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
LE+ M E +KP+ T +VL ++ +++ ++H +++G + + ++ AL+ M
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
Y K + AR +FDGM +R+ ++WNSM+ YV NE EA F M G + T +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
+ + CA +L R +H ++ G+D + ++ L+ Y KC +++ A+ +F ++
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ---- 399
+ +VSW AMI G QNG A+N+F QM V+P+ FTY ++TA +S
Sbjct: 401 -RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
+H ++++ +K+ V TAL++ Y K G + A +F+++ E+ + W+AM+ GY G
Sbjct: 460 IHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGF 519
Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS- 518
+ A++++ ++ +KPN TF SVI+AC+ S VE G + C K N ++ +S
Sbjct: 520 GKAALELFEEMQKGTIKPNGVTFLSVISACSH-SGLVEAGLK---CFYMMKENYSIELSM 575
Query: 519 ---SALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
A+V + + G + A + + + V+ + G Q
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 223/435 (51%), Gaps = 14/435 (3%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +FDR P+R+ V +N ++ Y ++ + + AL + + L T+ SVL L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
G+++H ++SGF VN+ST+LVD+Y + ++E R++FD M E NVVSW S++
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
Y +N+ + +F +M EG+KP + L AD G + +H + ++ G +
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
SV N+LISMY K K V A ++F ++ R ++WN+M+ G+ N ++A F+ M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
+ T+VSVI A A+ +H V+++ +D + + T L+ Y+KCG +
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
A IF MM E + V +W AMI G+ +G A+ F +M + ++PNG T+ +++A
Sbjct: 490 MIARLIFDMMSE-RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 392 -------QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELIDEK 442
+ + F +++K NY S+ A+++ + G L+EA + K
Sbjct: 549 CSHSGLVEAGLKCF----YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK 604
Query: 443 DIVAWSAMLAGYAQI 457
V + G QI
Sbjct: 605 PAVNVYGAMLGACQI 619
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 188/321 (58%), Gaps = 11/321 (3%)
Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
+++ C++ KELR Q+ V KNG+ +H +T L+ + + G +++A+++F +
Sbjct: 43 LLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 346 DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT-----AQPAVSPFQV 400
+V+ T M+ G + +D A+ FF +M + V P + ++ +L A+ V ++
Sbjct: 100 NVLYHT-MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK-EI 157
Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
H ++K+ + T L N Y K ++EA KVF+ + E+D+V+W+ ++AGY+Q G
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
A+++ + + E +KP+ T SV+ A +A + GK+ H ++++ ++ + +S+A
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALR-LISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
LV MY+K G++E+A ++F +R++VSWNSMI Y Q+ + K+A+ +F++M + ++
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 581 GITFIGVITACTHAGLVDEGQ 601
++ +G + AC G ++ G+
Sbjct: 337 DVSVMGALHACADLGDLERGR 357
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 512 bits (1318), Expect = e-144, Method: Compositional matrix adjust.
Identities = 279/780 (35%), Positives = 444/780 (56%), Gaps = 25/780 (3%)
Query: 80 TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
TL SVL+ C G++V +GF D N+ + L +Y ++++ RVFD++
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
+ W L++ A++ + LF +M G++ +S+TFS V + V
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
Q+H ++K+G SV N+L++ YLK++ V AR VFD M +RD I+WNS++ GYV+N
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
L + F M ++G E+ +T VSV CA ++ + L R +HS +K +
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
L+ YSKCG ++ A +F REM D VVS+T+MI+G+ + G AV F +M EG
Sbjct: 336 TLLDMYSKCGDLDSAKAVF---REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 378 VRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
+ P+ +T + +L +VH I + + V AL++ Y K G + EA
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAP 492
VF + KDI++W+ ++ GY++ A+ ++ L E P+E T + V+ AC +
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
SA ++G++ H ++ + V+++LV MY+K G + A +F +DLVSW M
Sbjct: 513 SA-FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 571
Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
I GY HG K+A+ +F +MR+ +E D I+F+ ++ AC+H+GLVDEG ++F+IM +E
Sbjct: 572 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 631
Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----------- 661
I PT+EHY+C+VD+ +R G L KA I MP AT+W +L CR+
Sbjct: 632 IEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 691
Query: 662 ---ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSF 718
L+P ++ YVL++N+YA W++ R+RK + R ++K G SWIE+K + F
Sbjct: 692 EKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIF 751
Query: 719 LAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAF 778
+AGD S+P++ I + L ++ R+ + GY P T Y L D ++ KE L HSE+LA+A
Sbjct: 752 VAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMAL 811
Query: 779 GLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
G++++ G +++ KNLRVCGDCH + K +SKL RR+IV+RD+NRFH FK+G CSC +W
Sbjct: 812 GIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 281/551 (50%), Gaps = 17/551 (3%)
Query: 29 KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
K+ +FD + +N L+ E + ++ LF + G+ + T S V K+
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSF 205
Query: 89 GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
L G Q+H +KSGF +V SLV Y++ V+ R+VFD+M E +V+SW
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265
Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
S+++GY N + ++ L +F +M V GI+ + T +V AD +++ VH++ +K
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
CN L+ MY K + A+AVF M DR +++ SM+AGY L EA + F
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
M G T +V+ CA + L +++H + +N + FD + LM Y+KC
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSI 387
G M++A +FS MR +KD++SW +I G+ +N + A++ F + E P+ T +
Sbjct: 446 GSMQEAELVFSEMR-VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
+L A ++S F ++H +I++ Y V +L++ Y K G L A +F+ I KD
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF- 502
+V+W+ M+AGY G + A+ ++ Q+ G++ +E +F S++ AC+ S V++G +F
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS-HSGLVDEGWRFF 623
Query: 503 ----HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYA 557
H C I+ + + C+ V M ++ G++ A + D W +++CG
Sbjct: 624 NIMRHECKIEPTVEHYACI----VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Query: 558 QHGHTKKALEV 568
H K A +V
Sbjct: 680 IHHDVKLAEKV 690
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 284/828 (34%), Positives = 454/828 (54%), Gaps = 24/828 (2%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +FD P R +N ++ Y + AL L+ +R G+PL S+ ++LK C L
Sbjct: 136 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 195
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
D G ++H VK G+ + +LV +Y + +++ RR+FD E + V W S+
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
LS Y+ + + LELF M + G PNS+T + L ++H V+K+
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 211 EVVT-SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
VCNALI+MY + + A + M + D +TWNS++ GYV N ++ EA E F+
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
+M AG + + S+I L +LH+ V+K+G D + + L+ YSKC
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435
Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
+ F M + KD++SWT +I+G+ QN A+ F + ++ + + IL
Sbjct: 436 LTCYMGRAFLRMHD-KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494
Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
A + ++H HI++ + + L++ Y K + A +VFE I KD+V
Sbjct: 495 RASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVV 553
Query: 446 AWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC 505
+W++M++ A G+ AV+++R++ G+ + I + A +A+ +G++ H
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL-CILSAAASLSALNKGREIHCY 612
Query: 506 SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKA 565
++ ++ A+V MY+ G+++SA VF R ++ L+ + SMI Y HG K A
Sbjct: 613 LLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAA 672
Query: 566 LEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVD 625
+E+F +MR +++ D I+F+ ++ AC+HAGL+DEG+ + IM +E+ + P EHY C+VD
Sbjct: 673 VELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVD 732
Query: 626 LYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAI 671
+ RA + +A + + M +A VW +LAACR L+ L+P +
Sbjct: 733 MLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 792
Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQI 731
VL+SN++A G W + +VR M ++K G SWIE+ K + F A D SHP+S +I
Sbjct: 793 LVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEI 852
Query: 732 YSKLEELSTRL-KDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQ 790
Y KL E++ +L ++ GY DT +VL ++D+ K +L HSER+AIA+GL+ TP A L+
Sbjct: 853 YEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLR 912
Query: 791 IVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
I KNLRVC DCHT KL+SKL RRDIV+RD NRFHHF+ GLCSCGD W
Sbjct: 913 ITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/574 (26%), Positives = 296/574 (51%), Gaps = 25/574 (4%)
Query: 84 VLKTCGCLFDHVFGRQVHCECVKSGFARDVN-VSTSLVDLYMRTNNVEDGRRVFDDMNES 142
VL+ CG GRQ+H K+ + +++ ++ LV +Y + +++D +VFD+M +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
+W +++ Y N L L+ M+VEG+ +F +L A + + ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWNSMVAGYVTNELH 261
++++K G + NAL+SMY K+ + AR +FDG +++ D++ WNS+++ Y T+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGI-DFDHNIRTG 320
+E E F M + G T VS + C +L +++H+ VLK+ + +
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
L+ Y++CGKM A +I M DVV+W ++I G++QN A+ FF M G +
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNN-ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384
Query: 381 NGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
+ + + I+ A +S ++HA++IK ++ + VG L++ Y K + + F
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444
Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAV 496
+ +KD+++W+ ++AGYAQ A++++R + + ++ +E S++ A + + +
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 504
Query: 497 EQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGY 556
K+ H ++ L + + + + LV +Y K N+ A+ VF+ + +D+VSW SMI
Sbjct: 505 IV-KEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562
Query: 557 AQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPT 616
A +G+ +A+E+F+ M L D + + +++A +++G+ E H Y
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGR--------EIHCYLL 614
Query: 617 MEHYS-------CMVDLYSRAGMLEKAMDIINRM 643
+ + +VD+Y+ G L+ A + +R+
Sbjct: 615 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 648
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 217/437 (49%), Gaps = 8/437 (1%)
Query: 161 DRVL-ELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV-VTSVCN 218
D VL E F R+ V F+ VL + V+ Q+H+ + K + +
Sbjct: 61 DGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG 120
Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
L+ MY K + DA VFD M DR + WN+M+ YV+N A + NM + G L
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
S+F +++K CA +++R +LHS ++K G I L+ Y+K + A ++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS-- 396
+E D V W +++S + +G + F +M G PN +T LTA S
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 397 --PFQVHAHIIKTNYEKS-FSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
++HA ++K++ S V AL+ Y + G + +A ++ ++ D+V W++++ G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
Y Q + A++ + + + G K +E + +S+I A + + + G + HA IK ++
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII-AASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
L V + L+ MYSK F R +DL+SW ++I GYAQ+ +ALE+F+++
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 574 RQDLEFDGITFIGVITA 590
++ +E D + ++ A
Sbjct: 480 KKRMEIDEMILGSILRA 496
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust.
Identities = 279/757 (36%), Positives = 423/757 (55%), Gaps = 117/757 (15%)
Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME--------------- 241
TA VH VIK+G + N L+++Y K+ AR +FD M
Sbjct: 32 TAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYS 91
Query: 242 ----------------DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVS 285
RDS++W +M+ GY + +A +M G E T+ T +
Sbjct: 92 KRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 286 VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMK 345
V+ A T+ + +++HS ++K G+ + ++ L+ Y+KCG A +F M ++
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM-VVR 210
Query: 346 DVVSWTAMISGHLQNGAIDLA-------------------------------VNFFCQMT 374
D+ SW AMI+ H+Q G +DLA ++ F +M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 375 REGV-RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSV-------------- 415
R+ + P+ FT + +L+A + Q+H+HI+ T ++ S V
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 416 -------------------GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
TALL+ Y+K G +++A +F + ++D+VAW+AM+ GY Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALC 516
G A+ ++R + G +PN +T +++++ + A++ GKQ H ++K+ ++
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV-ASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 517 VSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ 575
VS+AL+TMY+K GNI SAS F R +RD VSW SMI AQHGH ++ALE+F+ M +
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 576 DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEK 635
L D IT++GV +ACTHAGLV++G+QYFD+M + I PT+ HY+CMVDL+ RAG+L++
Sbjct: 510 GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 636 AMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAA 681
A + I +MP W ++L+ACR L+ L+P +S Y L+N+Y+A
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629
Query: 682 TGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTR 741
G W+E A++RK M D +VKKE G+SWIEVK+K + F D +HP+ N+IY ++++
Sbjct: 630 CGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDE 689
Query: 742 LKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDC 801
+K GY PDT+ VL D+++E KE IL HSE+LAIAFGL++TP L+I+KNLRVC DC
Sbjct: 690 IKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDC 749
Query: 802 HTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
HT IK ISKL R+I+VRDT RFHHFK+G CSC DYW
Sbjct: 750 HTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 227/510 (44%), Gaps = 90/510 (17%)
Query: 27 YSKKDQ-----SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTL 81
YSK+ FD+ PQR+ V + ++ Y + +A+ + + + G+ TL
Sbjct: 90 YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTL 149
Query: 82 SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD---- 137
++VL + G++VH VK G +V+VS SL+++Y + + + VFD
Sbjct: 150 TNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 138 ---------------------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
M E ++V+W S++SG+ + + R L++F +M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 171 QVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKM 229
+ + P+ FT ++VL A+ + Q+H+ ++ G ++ V NALISMY +
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 230 VRDAR-----------------AVFDG----------------MEDRDSITWNSMVAGYV 256
V AR A+ DG ++DRD + W +M+ GY
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
+ + EA F +M G T +++ + ++ L +Q+H +K+G + +
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
+ L+ Y+K G + AS+ F ++R +D VSWT+MI Q+G + A+ F M E
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME 509
Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYE------------KSFSVGTALLNAYV 424
G+RP+ TY + +A HA ++ + + S +++ +
Sbjct: 510 GLRPDHITYVGVFSA-------CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFG 562
Query: 425 KKGILDEAAKVFELID-EKDIVAWSAMLAG 453
+ G+L EA + E + E D+V W ++L+
Sbjct: 563 RAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 277/775 (35%), Positives = 430/775 (55%), Gaps = 25/775 (3%)
Query: 83 SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
++L+ C D + + +HC+ +K G D+ + L++ Y++ +D +FD+M E
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPER 113
Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
N VS+ +L GYA + L+ R+ EG + N F++ L + +H
Sbjct: 114 NNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLH 169
Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
+ ++K G + V ALI+ Y V AR VF+G+ +D + W +V+ YV N
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229
Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
++ + + M +AG TF + +K A+ +H Q+LK D + GL+
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLL 289
Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
Y++ G M DA K+F+ M + DVV W+ MI+ QNG + AV+ F +M V PN
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPK-NDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 383 FTYSIILT--AQPAVSPF--QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFEL 438
FT S IL A S Q+H ++K ++ V AL++ Y K +D A K+F
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 439 IDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQ 498
+ K+ V+W+ ++ GY +G+ A ++R+ V E TFSS + AC A A+++
Sbjct: 409 LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC-ASLASMDL 467
Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQ 558
G Q H +IK + VS++L+ MY+K G+I+ A VF D+ SWN++I GY+
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 559 HGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME 618
HG ++AL + M+ +D + +G+TF+GV++ C++AGL+D+GQ+ F+ M+ +H I P +E
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 619 HYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISL 664
HY+CMV L R+G L+KAM +I +P+ S +WR +L+A ++ +
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647
Query: 665 QPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDIS 724
P D A YVL+SNMYA W A +RK M + VKKE G SWIE + + F G
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSD 707
Query: 725 HPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATP 784
HP I LE L+ + AGY PD + VL D+DDE K+ L HSERLA+A+GLV P
Sbjct: 708 HPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMP 767
Query: 785 AGAP-LQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
+ + I+KNLR+C DCH+ +K+IS + +RD+V+RD NRFHHF G+CSCGD+W
Sbjct: 768 SSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/533 (27%), Positives = 248/533 (46%), Gaps = 12/533 (2%)
Query: 27 YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
+ K +LFD P+RN V + L Y Q+ + L+ + R G L +S LK
Sbjct: 99 FDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLK 154
Query: 87 TCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
L +H VK G+ + V +L++ Y +V+ R VF+ + ++V
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
W ++S Y N + L+L M++ G PN++TF T L G A VH ++
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
K + V L+ +Y + + DA VF+ M D + W+ M+A + N EA +
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334
Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
F M A T S++ CA K L QLH V+K G D D + L+ Y+
Sbjct: 335 LFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYA 394
Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
KC KM+ A K+F+ + K+ VSW +I G+ G A + F + R V T+S
Sbjct: 395 KCEKMDTAVKLFAELSS-KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453
Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
L A +++ QVH IKTN K +V +L++ Y K G + A VF ++
Sbjct: 454 SALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI 513
Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
D+ +W+A+++GY+ G A++I + KPN TF V++ C+ + ++QG++
Sbjct: 514 DVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSN-AGLIDQGQEC 572
Query: 503 HACSIKAK-LNNALCVSSALVTMYSKKGNIESASEVFKR-QRKRDLVSWNSMI 553
I+ + L + +V + + G ++ A ++ + + ++ W +M+
Sbjct: 573 FESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 201/427 (47%), Gaps = 7/427 (1%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+++F+ ++ V + ++ Y + +++L L +R G T + LK L
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGL 260
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
F + VH + +K+ + D V L+ LY + ++ D +VF++M +++VV W+ ++
Sbjct: 261 GAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMI 320
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
+ + +N + ++LF RM+ + PN FT S++L A Q+H +V+K G +
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
+ V NALI +Y K + + A +F + ++ ++WN+++ GY +AF F
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
+T TF S + CA+ + L Q+H +K + L+ Y+KCG +
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
+ A +F+ M E DV SW A+ISG+ +G A+ M +PNG T+ +L+
Sbjct: 501 KFAQSVFNEM-ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
Query: 392 QPAVSPFQ-----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIV 445
+ I E T ++ + G LD+A K+ E I E ++
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619
Query: 446 AWSAMLA 452
W AML+
Sbjct: 620 IWRAMLS 626
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 160/327 (48%), Gaps = 1/327 (0%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
+F+ P+ + V ++ ++ +C++ EA++LF+ +R + TLSS+L C
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 94 HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
G Q+H VK GF D+ VS +L+D+Y + ++ ++F +++ N VSW +++ G
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
Y + +F + TFS+ LG A + VQVH + IK
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
+V N+LI MY K ++ A++VF+ ME D +WN++++GY T+ L +A + M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
+ TF+ V+ C+ + ++ S + +GI+ T ++ + G+++
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQ 359
A K+ + V+ W AM+S +
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMN 630
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 186/389 (47%), Gaps = 20/389 (5%)
Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
L + ++++ C + A+ +H +LK G D L+ AY K G +DA +
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTA---Q 392
F M E ++ VS+ + G+ A + + ++ REG + P+ FT + L +
Sbjct: 107 FDEMPE-RNNVSFVTLAQGY----ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161
Query: 393 PAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
+ P+ +H+ I+K Y+ + VG AL+NAY G +D A VFE I KDIV W+ +++
Sbjct: 162 AEICPW-LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
Y + G E ++K+ + G PN +TF + + A + A + K H +K
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA-SIGLGAFDFAKGVHGQILKTCYV 279
Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
V L+ +Y++ G++ A +VF K D+V W+ MI + Q+G +A+++F M
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSR 629
R + + T ++ C G+Q ++V + IY + + ++D+Y++
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS----NALIDVYAK 395
Query: 630 AGMLEKAMDIINRMPFAASATVWRTVLAA 658
++ A+ + + + + W TV+
Sbjct: 396 CEKMDTAVKLFAELS-SKNEVSWNTVIVG 423
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 502 bits (1292), Expect = e-141, Method: Compositional matrix adjust.
Identities = 262/741 (35%), Positives = 422/741 (56%), Gaps = 77/741 (10%)
Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
++ Y+R E R++FD+M E ++VSW ++ GY RN+ + ELF I
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFE------IM 152
Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC--NALISMYLKSKMVRDAR 234
P VC N ++S Y ++ V DAR
Sbjct: 153 PER-----------------------------------DVCSWNTMLSGYAQNGCVDDAR 177
Query: 235 AVFDGMEDRDSITWNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCA 291
+VFD M +++ ++WN++++ YV N EA F++ N L FV
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK------ 231
Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
K++ ARQ + + + I TG Y++ GK+++A ++F ++DV +WT
Sbjct: 232 -KKKIVEARQFFDSMNVRDVVSWNTIITG----YAQSGKIDEARQLFDE-SPVQDVFTWT 285
Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEK 411
AM+SG++QN ++ A F +M N +++ +L ++ + +
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR 341
Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
+ S ++ Y + G + EA +F+ + ++D V+W+AM+AGY+Q G + A++++ Q+
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
EG + N +FSS ++ C A A+E GKQ H +K V +AL+ MY K G+I
Sbjct: 402 REGGRLNRSSFSSALSTC-ADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
E A+++FK +D+VSWN+MI GY++HG + AL F+ M+R+ L+ D T + V++AC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 592 THAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATV 651
+H GLVD+G+QYF M ++ + P +HY+CMVDL RAG+LE A +++ MPF A +
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 652 WRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMND 697
W T+L A R + +++P +S +YVLLSN+YA++G W + ++R M D
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 698 RKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQD 757
+ VKK GYSWIE++NKT++F GD HP+ ++I++ LEEL R+K AGY TS VL D
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
Query: 758 IDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
+++E KE ++ HSERLA+A+G++ +G P++++KNLRVC DCH IK ++++ R I+
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760
Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
+RD NRFHHFK+G CSCGDYW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 219/440 (49%), Gaps = 31/440 (7%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+S+FDR P++N V +N LL Y ++S +EA LF L + L +K
Sbjct: 177 RSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI- 235
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
V RQ S RDV +++ Y ++ +++ R++FD+ +V +WT+++
Sbjct: 236 ---VEARQF----FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIVATAVQVHTMVIKNGG 210
SGY +N+M + ELF +M + N +++ +L G + E + M +N
Sbjct: 289 SGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN-- 342
Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
S N +I+ Y + + +A+ +FD M RD ++W +M+AGY + EA F
Sbjct: 343 ---VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
M G L RS+F S + CA L L +QLH +++K G + + L++ Y KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
+E+A+ +F M KD+VSW MI+G+ ++G ++A+ FF M REG++P+ T +L+
Sbjct: 460 IEEANDLFKEM-AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 391 A---QPAVSPFQVHAHIIKTNY-----EKSFSVGTALLNAYVKKGILDEAAKVFELID-E 441
A V + + + + +Y + ++ LL + G+L++A + + + E
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG---RAGLLEDAHNLMKNMPFE 575
Query: 442 KDIVAWSAMLAGYAQIGDTE 461
D W +L G+TE
Sbjct: 576 PDAAIWGTLLGASRVHGNTE 595
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust.
Identities = 278/833 (33%), Positives = 451/833 (54%), Gaps = 32/833 (3%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGCLF 92
+FD +N ++N ++ Y R+ L+ E L F+ I L T V+K C +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 93 DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLS 152
D G VH VK+G DV V +LV Y V D ++FD M E N+VSW S++
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 153 GYARNKMNDRVLELFHRMQVE----GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
++ N ++ L M E P+ T TVL V A E + VH +K
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
+ + NAL+ MY K + +A+ +F +++ ++WN+MV G+ F+
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 269 NNMGLAGAELTRS---TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
M LAG E ++ T ++ + +C L ++LH LK ++ + + +Y
Sbjct: 382 RQM-LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
+KCG + A ++F +R K V SW A+I GH Q+ L+++ QM G+ P+ FT
Sbjct: 441 AKCGSLSYAQRVFHGIRS-KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTV 499
Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
+L+A + +VH II+ E+ V ++L+ Y+ G L +F+ +++
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMED 559
Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTA-PSAAVEQGK 500
K +V+W+ ++ GY Q G + A+ ++RQ+ G++ + V AC+ PS + G+
Sbjct: 560 KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS--LRLGR 617
Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
+ HA ++K L + ++ +L+ MY+K G+I +S+VF +++ SWN+MI GY HG
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
K+A+++F+EM+R D +TF+GV+TAC H+GL+ EG +Y D M + + P ++HY
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737
Query: 621 SCMVDLYSRAGMLEKAMDII-NRMPFAASATVWRTVLAACR--------------LISLQ 665
+C++D+ RAG L+KA+ ++ M A +W+++L++CR L L+
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 797
Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
P YVLLSN+YA G W++ +VR+ MN+ ++K+AG SWIE+ K +SF+ G+
Sbjct: 798 PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFL 857
Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
+I S L ++ GY+PDT V D+ +E K L HSE+LA+ +GL+ T
Sbjct: 858 DGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSE 917
Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
G +++ KNLR+C DCH KLISK+ R+IVVRD RFHHFK G+CSCGDYW
Sbjct: 918 GTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 239 bits (611), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 168/597 (28%), Positives = 292/597 (48%), Gaps = 24/597 (4%)
Query: 76 LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNV-STSLVDLYMRTNNVEDGRR 134
L L +L+ G D GR++H S R+ +V T ++ +Y + +D R
Sbjct: 82 LVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 141
Query: 135 VFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEG 193
VFD + N+ W +++S Y+RN++ D VLE F M + P+ FT+ V+ A
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 194 IVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA 253
V + VH +V+K G V NAL+S Y V DA +FD M +R+ ++WNSM+
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 254 GYVTNELHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN 309
+ N E+F M G +T V+V+ +CA +E+ L + +H +K
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
+D + + LM YSKCG + +A IF M K+VVSW M+ G G +
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 370 FCQMTREG--VRPNGFTYSIILTAQPAV-------SPFQVHAHIIKTNYEKSFSVGTALL 420
QM G V+ + T IL A P S ++H + +K + + V A +
Sbjct: 381 LRQMLAGGEDVKADEVT---ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFV 437
Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
+Y K G L A +VF I K + +W+A++ G+AQ D ++ + Q+ G+ P+ F
Sbjct: 438 ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 497
Query: 481 TFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
T S+++AC+ ++ GK+ H I+ L L V +++++Y G + + +F
Sbjct: 498 TVCSLLSACSKLK-SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556
Query: 541 QRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEG 600
+ LVSWN++I GY Q+G +AL VF++M ++ GI+ + V AC+ + G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 601 QQYFDIMVNEHHIYPTMEHYSC-MVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
++ + H+ +C ++D+Y++ G + ++ + N + ++A+ W ++
Sbjct: 617 REAHAYALK--HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMI 670
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 158/327 (48%), Gaps = 4/327 (1%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
Q +F + +N L+ + + + + +L+ L ++ GL T+ S+L C L
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
G++VH +++ RD+ V S++ LY+ + + +FD M + ++VSW +++
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
+GY +N DR L +F +M + GI+ + V G + + + H +K+ E
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 629
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
+ +LI MY K+ + + VF+G++++ + +WN+M+ GY + L EA + F M
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKCG 329
G TF+ V+ C + + + Q +K+ N++ ++ + G
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ-MKSSFGLKPNLKHYACVIDMLGRAG 748
Query: 330 KMEDASKIFS-MMREMKDVVSWTAMIS 355
+++ A ++ + M E DV W +++S
Sbjct: 749 QLDKALRVVAEEMSEEADVGIWKSLLS 775
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/764 (35%), Positives = 431/764 (56%), Gaps = 38/764 (4%)
Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
+H V S ++V +S LV+LY NV R FD + +V +W ++SGY R
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 160 NDRVLELFHR-MQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
+ V+ F M G+ P+ TF +VL V ++H + +K G V
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAA 189
Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
+LI +Y + K V +AR +FD M RD +WN+M++GY + EA N + +
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAM 245
Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
T VS++ C + +HS +K+G++ + + L+ Y++ G++ D K+F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SII-----L 389
M ++D++SW ++I + N A++ F +M ++P+ T SI+ +
Sbjct: 306 DRMY-VRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
A +V F + K + + ++G A++ Y K G++D A VF + D+++W+
Sbjct: 365 RACRSVQGFTLR----KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
+++GYAQ G A+++Y + EG + N+ T+ SV+ AC+ + A+ QG + H +K
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS-QAGALRQGMKLHGRLLK 479
Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
L + V ++L MY K G +E A +F + + + V WN++I + HGH +KA+ +
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
FKEM + ++ D ITF+ +++AC+H+GLVDEGQ F++M ++ I P+++HY CMVD+Y
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
RAG LE A+ I M A++W +L+ACR L ++P +VL
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659
Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
LSNMYA+ G W+ +R + + + ++K G+S +EV NK F G+ +HP ++Y +
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
L L +LK GY PD +VLQD++D+ KE IL HSERLAIAF L+ATPA ++I KN
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779
Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
LRVCGDCH+V K ISK+ R+I+VRD+NRFHHFK G+CSCGDYW
Sbjct: 780 LRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 260/537 (48%), Gaps = 18/537 (3%)
Query: 35 FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF-LGIRRLGLPLFGSTLSSVLKTCGCLFD 93
FD R+ +N ++ Y R E + F L + GL T SVLK C + D
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 168
Query: 94 HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
G ++HC +K GF DV V+ SL+ LY R V + R +FD+M ++ SW +++SG
Sbjct: 169 ---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 225
Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
Y ++ L L + ++ +S T ++L + G V +H+ IK+G E
Sbjct: 226 YCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
V N LI +Y + +RD + VFD M RD I+WNS++ Y NE + A F M L
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL 341
Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-DHNIRTGLMVAYSKCGKME 332
+ + T +S+ + + ++R R + L+ G D I ++V Y+K G ++
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVD 401
Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTA 391
A +F+ + DV+SW +ISG+ QNG A+ + M EG + N T+ +L A
Sbjct: 402 SARAVFNWLPN-TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPA 460
Query: 392 QPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAW 447
++H ++K V T+L + Y K G L++A +F I + V W
Sbjct: 461 CSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 520
Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACS 506
+ ++A + G E AV +++++ EGVKP+ TF ++++AC+ S V++G+ F
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS-HSGLVDEGQWCFEMMQ 579
Query: 507 IKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGHT 562
+ +L +V MY + G +E+A + K + D W +++ HG+
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 220/428 (51%), Gaps = 15/428 (3%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
LFD P R+ +N ++ YC+ +EAL L G+R + T+ S+L C D
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGD 262
Query: 94 HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
G +H +K G ++ VS L+DLY + D ++VFD M +++SW S++
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG--E 211
Y N+ R + LF M++ I+P+ T ++ +L+ G + V ++ G E
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
+T + NA++ MY K +V ARAVF+ + + D I+WN++++GY N EA E +N M
Sbjct: 383 DIT-IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 272 GLAGA-ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
G + T+VSV+ C+ LR +LH ++LKNG+ D + T L Y KCG+
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT 390
+EDA +F + + V W +I+ H +G + AV F +M EGV+P+ T+ +L+
Sbjct: 502 LEDALSLFYQIPRVNS-VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 391 A---QPAVSPFQVHAHIIKTNYEKSFSVG--TALLNAYVKKGILDEAAKVFELID-EKDI 444
A V Q +++T+Y + S+ +++ Y + G L+ A K + + + D
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 445 VAWSAMLA 452
W A+L+
Sbjct: 621 SIWGALLS 628
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 25/349 (7%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
Q +FDR R+ + +N ++ Y + A++LF +R + TL S+ L
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 92 FDHVFGRQVHCECVKSG-FARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
D R V ++ G F D+ + ++V +Y + V+ R VF+ + ++V+SW ++
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 151 LSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
+SGYA+N +E+++ M+ EG I N T+ +VL + G + +++H ++KNG
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG 481
Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
+ V +L MY K + DA ++F + +S+ WN+++A + + +A F
Sbjct: 482 LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG------IDFDHNI-----R 318
M G + TFV+++ C+ HS ++ G + D+ I
Sbjct: 542 EMLDEGVKPDHITFVTLLSACS-----------HSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 319 TGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
G MV Y + G++E A K M D W A++S +G +DL
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
++ K HA + +K +C+S+ LV +Y GN+ A F + RD+ +WN MI G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 556 YAQHGHTKKALEVFKE-MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
Y + G++ + + F M L D TF V+ AC V +G + + + ++
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMW 183
Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
S ++ LYSR + A + + MP
Sbjct: 184 DVYVAAS-LIHLYSRYKAVGNARILFDEMP 212
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust.
Identities = 282/839 (33%), Positives = 470/839 (56%), Gaps = 45/839 (5%)
Query: 37 RSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVF 96
RSP+ + LL R +L +EA+ ++ + LG+ ++LK L D
Sbjct: 60 RSPEW----WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 97 GRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
G+Q+H K G+ D V V+ +LV+LY + + +VFD ++E N VSW SL+S
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLAD----EGIVATAVQVHTMVIKNGGE 211
+ + LE F M E ++P+SFT +V+ ++ EG++ QVH ++ G E
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKG-E 233
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
+ + + N L++MY K + ++ + RD +TWN++++ NE +EA E M
Sbjct: 234 LNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM 293
Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG-IDFDHNIRTGLMVAYSKCGK 330
L G E T SV+ C+ + LR ++LH+ LKNG +D + + + L+ Y C +
Sbjct: 294 VLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ 353
Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIIL 389
+ ++F M + K + W AMI+G+ QN A+ F M G+ N T + ++
Sbjct: 354 VLSGRRVFDGMFDRK-IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 390 TAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
A F +H ++K ++ V L++ Y + G +D A ++F ++++D+V
Sbjct: 413 PACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLV 472
Query: 446 AWSAMLAGYAQIGDTEGAV-----------KIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
W+ M+ GY E A+ K+ + + +KPN T +++ +C A SA
Sbjct: 473 TWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSA 532
Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
+ +GK+ HA +IK L + V SALV MY+K G ++ + +VF + ++++++WN +I
Sbjct: 533 -LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
Y HG+ ++A+++ + M Q ++ + +TFI V AC+H+G+VDEG + F +M ++ +
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS-ATVWRTVLAACR------------- 660
P+ +HY+C+VDL RAG +++A ++N MP + A W ++L A R
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711
Query: 661 -LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFL 719
LI L+P+ ++ YVLL+N+Y++ G W + VR+ M ++ V+KE G SWIE ++ + F+
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFV 771
Query: 720 AGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFG 779
AGD SHPQS ++ LE L R++ GY PDTS VL +++++ KE +L HSE+LAIAFG
Sbjct: 772 AGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFG 831
Query: 780 LVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
++ T G +++ KNLRVC DCH K ISK+ R+I++RD RFH FK G CSCGDYW
Sbjct: 832 ILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/746 (34%), Positives = 426/746 (57%), Gaps = 25/746 (3%)
Query: 116 STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM--QVE 173
+ +++ +++T +V R +FD M + VV+WT L+ YARN D +LF +M
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 174 GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV--VTSVCNALISMYLKSKMVR 231
P+ TF+T+L D QVH +K G + +V N L+ Y + + +
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 232 DARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA 291
A +F+ + ++DS+T+N+++ GY + L+ E+ F M +G + + TF V+K
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 292 TTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWT 351
+ L +QLH+ + G D ++ ++ YSK ++ + +F M E+ D VS+
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYN 320
Query: 352 AMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKT 407
+IS + Q + +++FF +M G F ++ +L+ +S Q +H +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLA 380
Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
+ VG +L++ Y K + +EA +F+ + ++ V+W+A+++GY Q G +K++
Sbjct: 381 TADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
++ ++ ++ TF++V+ A +A A++ GKQ HA I++ + S LV MY+K
Sbjct: 441 TKMRGSNLRADQSTFATVLKA-SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
G+I+ A +VF+ R+ VSWN++I +A +G + A+ F +M L+ D ++ +GV
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
+TAC+H G V++G +YF M + I P +HY+CM+DL R G +A +++ MPF
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 648 SATVWRTVLAACR--------------LISLQP-HDSAIYVLLSNMYAATGHWQERARVR 692
+W +VL ACR L S++ D+A YV +SN+YAA G W++ V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 693 KLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTS 752
K M +R +KK YSW+EV +K + F + D +HP ++I K+ EL+ ++ GYKPDTS
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Query: 753 YVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLE 812
V+QD+D++ K L HSERLA+AF L++TP G P+ ++KNLR C DCH IKLISK+
Sbjct: 740 SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIV 799
Query: 813 RRDIVVRDTNRFHHFKEGLCSCGDYW 838
+R+I VRDT+RFHHF EG+CSCGDYW
Sbjct: 800 KREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 225/426 (52%), Gaps = 11/426 (2%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
LF+ P+++ V +N L+ Y +D L+ E+++LFL +R+ G T S VLK L D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 94 HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
G+Q+H V +GF+RD +V ++D Y + + V + R +FD+M E + VS+ ++S
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
Y++ + L F MQ G +F F+T+L + A+ + Q+H + + +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
V N+L+ MY K +M +A +F + R +++W ++++GYV LH + F M
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
+ +STF +V+K A+ L L +QLH+ ++++G + +GL+ Y+KCG ++D
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA-- 391
A ++F M + ++ VSW A+IS H NG + A+ F +M G++P+ + +LTA
Sbjct: 506 AVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 392 -----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIV 445
+ FQ + I +K +L+ + G EA K+ E+ E D +
Sbjct: 565 HCGFVEQGTEYFQAMSPIYGITPKKKHYA--CMLDLLGRNGRFAEAEKLMDEMPFEPDEI 622
Query: 446 AWSAML 451
WS++L
Sbjct: 623 MWSSVL 628
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 157/593 (26%), Positives = 282/593 (47%), Gaps = 49/593 (8%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR---LGLPLFGSTLSSVLKTC 88
+ LFD P R V + L+ Y R+S EA LF + R LP T +++L C
Sbjct: 99 RDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH-VTFTTLLPGC 157
Query: 89 GCLFDHVFGRQVHCECVKSGFARD--VNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
QVH VK GF + + VS L+ Y ++ +F+++ E + V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVI 206
+ +L++GY ++ + + LF +M+ G +P+ FTFS VL + A Q+H + +
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
G SV N ++ Y K V + R +FD M + D +++N +++ Y + + +
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
F M G + F +++ + A L++ RQLH Q L D ++ L+ Y+
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
KC E+A IF + + + VSWTA+ISG++Q G + F +M +R + T++
Sbjct: 398 KCEMFEEAELIFKSLPQ-RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFA 456
Query: 387 IILTAQPAVSPF----QVHAHIIKT-NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
+L A + + Q+HA II++ N E FS G+ L++ Y K G + +A +VFE + +
Sbjct: 457 TVLKASASFASLLLGKQLHAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEMPD 515
Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT----------- 490
++ V+W+A+++ +A GD E A+ + ++ G++P+ + V+ AC+
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575
Query: 491 ----APSAAVEQGKQFHACSIKAKLNNA------------------LCVSSAL--VTMYS 526
+P + K+ +AC + N + SS L ++
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHK 635
Query: 527 KKGNIESASE-VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLE 578
+ E A+E +F ++ RD ++ SM YA G +K +V K MR + ++
Sbjct: 636 NQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 239/498 (47%), Gaps = 43/498 (8%)
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG----- 254
+V +IK G + T N ++ L+ V AR V+D M +++++ N+M++G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 255 --------------------------YVTNELHMEAFETFNNMGLAGAELTRS--TFVSV 286
Y N EAF+ F M + + TF ++
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDH--NIRTGLMVAYSKCGKMEDASKIFSMMREM 344
+ C Q+H+ +K G D + + L+ +Y + +++ A +F + E
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE- 212
Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QV 400
KD V++ +I+G+ ++G +++ F +M + G +P+ FT+S +L A + F Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 401 HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDT 460
HA + T + + SVG +L+ Y K + E +F+ + E D V+++ +++ Y+Q
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQY 332
Query: 461 EGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
E ++ +R++ G F F++++ + A ++++ G+Q H ++ A ++ L V ++
Sbjct: 333 EASLHFFREMQCMGFDRRNFPFATML-SIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
LV MY+K E A +FK +R VSW ++I GY Q G L++F +MR +L D
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
TF V+ A + G+Q ++ ++ S +VD+Y++ G ++ A+ +
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVF 510
Query: 641 NRMPFAASATVWRTVLAA 658
MP +A W +++A
Sbjct: 511 EEMP-DRNAVSWNALISA 527
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 178/404 (44%), Gaps = 56/404 (13%)
Query: 291 ATTKELRL--------ARQLHSQVLKNGIDFDHNIRTGLMVA-YSKCGKMEDASKIFSMM 341
AT ++LR R++ ++++K G D D R+ +V + G++ A K++ M
Sbjct: 16 ATLRQLRQPSPATFLDTRRVDARIIKTGFDTD-TCRSNFIVEDLLRRGQVSAARKVYDEM 74
Query: 342 REMKDVVSWTAMISGHLQNGAI-------------------------------DLAVNFF 370
K+ VS MISGH++ G + D A F
Sbjct: 75 PH-KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLF 133
Query: 371 CQMTREG--VRPNGFTYSIILT----AQPAVSPFQVHAHIIKTNYEKS--FSVGTALLNA 422
QM R P+ T++ +L A P + QVHA +K ++ + +V LL +
Sbjct: 134 RQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKS 193
Query: 423 YVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTF 482
Y + LD A +FE I EKD V ++ ++ GY + G ++ ++ ++ G +P++FTF
Sbjct: 194 YCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
S V+ A G+Q HA S+ + V + ++ YSK + +F
Sbjct: 254 SGVLKAVVGLH-DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQ 602
+ D VS+N +I Y+Q + +L F+EM+ + F +++ + + G+Q
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 603 YF--DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
++ I + + +VD+Y++ M E+A I +P
Sbjct: 373 LHCQALLATADSI---LHVGNSLVDMYAKCEMFEEAELIFKSLP 413
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 268/794 (33%), Positives = 412/794 (51%), Gaps = 70/794 (8%)
Query: 113 VNVSTSLVDLYMRTNNVEDGRRVFDDMNESN--VVSWTSLLSGYARNKMNDRVLELFHRM 170
+N+++ L+ Y+ + + S+ V W SL+ Y N ++ L LF M
Sbjct: 59 LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118
Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
P+++TF V + V H + + G V NAL++MY + + +
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL 178
Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM-GLAGAELTRSTFVSVIKL 289
DAR VFD M D ++WNS++ Y A E F+ M G T V+V+
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
CA+ L +QLH + + + + + L+ Y+KCG M++A+ +FS M +KDVVS
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVVS 297
Query: 350 WTAMISGHLQNGAIDLAVNFF----------------------------------C-QMT 374
W AM++G+ Q G + AV F C QM
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 375 REGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK-------TNYEKSFSVGTALLNAY 423
G++PN T +L+ +V ++H + IK + V L++ Y
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 424 VKKGILDEAAKVFELID--EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG--VKPNE 479
K +D A +F+ + E+D+V W+ M+ GY+Q GD A+++ ++ E +PN
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA-LCVSSALVTMYSKKGNIESASEVF 538
FT S + AC A AA+ GKQ HA +++ + N L VS+ L+ MY+K G+I A VF
Sbjct: 478 FTISCALVAC-ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
++ V+W S++ GY HG+ ++AL +F EMRR + DG+T + V+ AC+H+G++D
Sbjct: 537 DNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMID 596
Query: 599 EGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAA 658
+G +YF+ M + P EHY+C+VDL RAG L A+ +I MP VW L+
Sbjct: 597 QGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSC 656
Query: 659 CRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEA 704
CR+ L + Y LLSN+YA G W++ R+R LM + VKK
Sbjct: 657 CRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRP 716
Query: 705 GYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKE 764
G SW+E T +F GD +HP + +IY L + R+KD GY P+T + L D+DDE K+
Sbjct: 717 GCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKD 776
Query: 765 AILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRF 824
+L +HSE+LA+A+G++ TP GA ++I KNLRVCGDCHT +S++ DI++RD++RF
Sbjct: 777 DLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRF 836
Query: 825 HHFKEGLCSCGDYW 838
HHFK G CSC YW
Sbjct: 837 HHFKNGSCSCKGYW 850
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 148/525 (28%), Positives = 240/525 (45%), Gaps = 58/525 (11%)
Query: 33 SLFDRSPQRN--FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGC 90
SL R P + +N L+ Y + + L LF + L T V K CG
Sbjct: 80 SLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 139
Query: 91 LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
+ G H + +GF +V V +LV +Y R ++ D R+VFD+M+ +VVSW S+
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199
Query: 151 LSGYARNKMNDRVLELFHRMQVE-GIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
+ YA+ LE+F RM E G +P++ T VL A G + Q+H + +
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS- 258
Query: 210 GEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVA-------------- 253
E++ + V N L+ MY K M+ +A VF M +D ++WN+MVA
Sbjct: 259 -EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRL 317
Query: 254 ---------------------GYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
GY L EA M +G + T +SV+ CA+
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 293 TKELRLARQLHSQVLKNGIDFDHN-------IRTGLMVAYSKCGKMEDASKIF-SMMREM 344
L +++H +K ID N + L+ Y+KC K++ A +F S+ +
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 345 KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG--VRPNGFTYSIILTAQPAVSPF---- 398
+DVV+WT MI G+ Q+G + A+ +M E RPN FT S L A +++
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 399 QVHAHIIKTNYEK-SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQI 457
Q+HA+ ++ V L++ Y K G + +A VF+ + K+ V W++++ GY
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Query: 458 GDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
G E A+ I+ ++ G K + T V+ AC+ S ++QG ++
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSH-SGMIDQGMEY 601
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 188/408 (46%), Gaps = 49/408 (12%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI-RRLGLPLFGSTLSSVLKTCGC 90
+ +FD + V +N ++ Y + + AL +F + G TL +VL C
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 91 LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR------TNNV--------------- 129
L H G+Q+HC V S +++ V LVD+Y + N V
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 130 ----------EDGRRVFDDMNES----NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGI 175
ED R+F+ M E +VV+W++ +SGYA+ + L + +M GI
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 176 KPNSFTFSTVLGVLADEGIVATAVQVHTMVI-------KNGGEVVTSVCNALISMYLKSK 228
KPN T +VL A G + ++H I KNG V N LI MY K K
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 229 MVRDARAVFDGM--EDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSV 286
V ARA+FD + ++RD +TW M+ GY + +A E + M + + F
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 287 IKL--CATTKELRLARQLHSQVLKNGID-FDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
L CA+ LR+ +Q+H+ L+N + + L+ Y+KCG + DA +F M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA 391
K+ V+WT++++G+ +G + A+ F +M R G + +G T ++L A
Sbjct: 542 -KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 165/319 (51%), Gaps = 17/319 (5%)
Query: 287 IKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKD 346
I C T +++L +H ++L GI N+ + L+ Y G + A S++R
Sbjct: 35 IHKCKTISQVKL---IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHA---VSLLRRFPP 87
Query: 347 ----VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ--- 399
V W ++I + NG + + F M P+ +T+ + A +S +
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 400 -VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
HA + T + + VG AL+ Y + L +A KVF+ + D+V+W++++ YA++G
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 459 DTEGAVKIYRQLTSE-GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
+ A++++ ++T+E G +P+ T +V+ C A GKQ H ++ +++ + V
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPC-ASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
+ LV MY+K G ++ A+ VF +D+VSWN+M+ GY+Q G + A+ +F++M+ + +
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 578 EFDGITFIGVITACTHAGL 596
+ D +T+ I+ GL
Sbjct: 327 KMDVVTWSAAISGYAQRGL 345
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 160/351 (45%), Gaps = 35/351 (9%)
Query: 40 QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQ 99
+ + V ++ + Y + L EAL + + G+ TL SVL C + + G++
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 100 VHCECVK-------SGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN--ESNVVSWTSL 150
+HC +K +G + V L+D+Y + V+ R +FD ++ E +VV+WT +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 151 LSGYARNKMNDRVLELFHRMQVEG--IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
+ GY+++ ++ LEL M E +PN+FT S L A + Q+H ++N
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 209 GGEVVT-SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
V V N LI MY K + DAR VFD M ++ +TW S++ GY + EA
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA--- 324
F+ M G +L T + V+ C+ HS ++ G+++ + ++T V+
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACS-----------HSGMIDQGMEYFNRMKTVFGVSPGP 615
Query: 325 ---------YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
+ G++ A ++ M V W A +S +G ++L
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 37/332 (11%)
Query: 386 SIILTAQPAVSPFQVHA----HIIKTNYEKSFSVGTALLN-------AYVKKGILDEAAK 434
S+ T+ P ++P +H +K ++K S G LN Y+ G L A
Sbjct: 21 SLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVS 80
Query: 435 VFELIDEKD--IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
+ D + W++++ Y G + ++ + S P+ +TF V AC
Sbjct: 81 LLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI 140
Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
S+ V G+ HA S+ + + V +ALV MYS+ ++ A +VF D+VSWNS+
Sbjct: 141 SS-VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199
Query: 553 ICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
I YA+ G K ALE+F M + D IT + V+ C G G+Q V
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
Query: 612 HIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRLISLQPHDSAI 671
I M +C+VD+Y++ GM+++A + + M W ++A
Sbjct: 260 MI-QNMFVGNCLVDMYAKCGMMDEANTVFSNMS-VKDVVSWNAMVAG------------- 304
Query: 672 YVLLSNMYAATGHWQERARVRKLMNDRKVKKE 703
Y+ G +++ R+ + M + K+K +
Sbjct: 305 -------YSQIGRFEDAVRLFEKMQEEKIKMD 329
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC--GCL 91
+FD +N V + L+ Y +EAL +F +RR+G L G TL VL C +
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGM 594
Query: 92 FDH---VFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVVSW 147
D F R V G LVDL R + R+ ++M E V W
Sbjct: 595 IDQGMEYFNRMKTVFGVSPGPEH----YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 148 TSLLS 152
+ LS
Sbjct: 651 VAFLS 655
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/579 (40%), Positives = 364/579 (62%), Gaps = 25/579 (4%)
Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG--LMVAYSKCGKMEDASKI 337
R + +++K C K L R +H+ +L++ F H+I G L+ Y+KCG +E+A K+
Sbjct: 60 RRFYNTLLKKCTVFKLLIQGRIVHAHILQS--IFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA--- 394
F M + +D V+WT +ISG+ Q+ A+ FF QM R G PN FT S ++ A A
Sbjct: 118 FEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 395 -VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
Q+H +K ++ + VG+ALL+ Y + G++D+A VF+ ++ ++ V+W+A++AG
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
+A+ TE A+++++ + +G +P+ F+++S+ AC++ + +EQGK HA IK+
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS-TGFLEQGKWVHAYMIKSGEKL 295
Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
+ L+ MY+K G+I A ++F R KRD+VSWNS++ YAQHG K+A+ F+EMR
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
R + + I+F+ V+TAC+H+GL+DEG Y+++M + I P HY +VDL RAG L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHYVTVVDLLGRAGDL 414
Query: 634 EKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMY 679
+A+ I MP +A +W+ +L ACR+ L P D +V+L N+Y
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
A+ G W + ARVRK M + VKKE SW+E++N + F+A D HPQ +I K EE+
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVL 534
Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
++K+ GY PDTS+V+ +D + +E L HSE++A+AF L+ TP G+ + I KN+RVCG
Sbjct: 535 AKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCG 594
Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
DCHT IKL SK+ R+I+VRDTNRFHHFK+G CSC DYW
Sbjct: 595 DCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 209/414 (50%), Gaps = 43/414 (10%)
Query: 82 SSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
+++LK C + GR VH ++S F D+ + +L+++Y + ++E+ R+VF+ M +
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
+ V+WT+L+SGY+++ L F++M G PN FT S+V+ A E Q+
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
H +K G + V +AL+ +Y + ++ DA+ VFD +E R+ ++WN+++AG+
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
+A E F M G + ++ S+ C++T L + +H+ ++K+G L
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
+ Y+K G + DA KIF + + +DVVSW ++++ + Q+G AV +F +M R G+RPN
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAK-RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 382 GFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
++ +LTA G+LDE +EL+ +
Sbjct: 363 EISFLSVLTACS-------------------------------HSGLLDEGWHYYELMKK 391
Query: 442 KDIV--AWSAM----LAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
IV AW + L G A GD A++ ++ ++P + +++NAC
Sbjct: 392 DGIVPEAWHYVTVVDLLGRA--GDLNRALRFIEEMP---IEPTAAIWKALLNAC 440
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 164/325 (50%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +F++ PQR+FV + L+ Y + +AL F + R G TLSSV+K
Sbjct: 115 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 174
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
G Q+H CVK GF +V+V ++L+DLY R ++D + VFD + N VSW +L+
Sbjct: 175 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 234
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
+G+AR ++ LELF M +G +P+ F+++++ G + G + VH +IK+G +
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
+V N L+ MY KS + DAR +FD + RD ++WNS++ Y + EA F M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
G +F+SV+ C+ + L + + K+GI + ++ + G +
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 332 EDASKIFSMMREMKDVVSWTAMISG 356
A + M W A+++
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNA 439
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/657 (37%), Positives = 383/657 (58%), Gaps = 20/657 (3%)
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
Q+H +I + T + N L+ L + + + +F + + +NS++ G+V N
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNH 90
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
L E + F ++ G L TF V+K C +L LHS V+K G + D T
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
L+ YS G++ DA K+F + + + VV+WTA+ SG+ +G A++ F +M GV+
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 380 PNGFTYSIILTAQPAVSPFQVHAHIIK----TNYEKSFSVGTALLNAYVKKGILDEAAKV 435
P+ + +L+A V I+K +K+ V T L+N Y K G +++A V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
F+ + EKDIV WS M+ GYA + ++++ Q+ E +KP++F+ +++C A A
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSC-ASLGA 328
Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
++ G+ + + + L +++AL+ MY+K G + EVFK +++D+V N+ I G
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
A++GH K + VF + + + DG TF+G++ C HAGL+ +G ++F+ + + +
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 616 TMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL-------------- 661
T+EHY CMVDL+ RAGML+ A +I MP +A VW +L+ CRL
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 662 ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAG 721
I+L+P ++ YV LSN+Y+ G W E A VR +MN + +KK GYSWIE++ K + FLA
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568
Query: 722 DISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLV 781
D SHP S++IY+KLE+L ++ G+ P T +V D+++E KE +L HSE+LA+A GL+
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLI 628
Query: 782 ATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
+T G +++VKNLRVCGDCH V+KLISK+ RR+IVVRD NRFH F G CSC DYW
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 228/465 (49%), Gaps = 23/465 (4%)
Query: 23 RSPFYSKKDQS--LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST 80
R+ F+ + S LF + N YN L+ + + L E L+LFL IR+ GL L G T
Sbjct: 54 RTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFT 113
Query: 81 LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN 140
VLK C G +H VK GF DV TSL+ +Y + + D ++FD++
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP 173
Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
+ +VV+WT+L SGY + + ++LF +M G+KP+S+ VL G + +
Sbjct: 174 DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW 233
Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
+ + + + + V L+++Y K + AR+VFD M ++D +TW++M+ GY +N
Sbjct: 234 IVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
E E F M + + + V + CA+ L L S + ++ + +
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 321 LMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRP 380
L+ Y+KCG M ++F M+E KD+V A ISG +NG + L+ F Q + G+ P
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
Query: 381 NGFTYSIILTAQPAVSPFQVHAHIIKTN--YEKSFSVGTAL----------LNAYVKKGI 428
+G T+ +L VHA +I+ + + S AL ++ + + G+
Sbjct: 413 DGSTFLGLLCG-------CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGM 465
Query: 429 LDEAAKVF-ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTS 472
LD+A ++ ++ + + W A+L+G + DT+ A + ++L +
Sbjct: 466 LDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIA 510
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 226/493 (45%), Gaps = 8/493 (1%)
Query: 85 LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
L + C +H+ +Q+H + D + L+ + + +F N+
Sbjct: 19 LISVACTVNHL--KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNI 76
Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
+ SL++G+ N + L+LF ++ G+ + FTF VL + +H++
Sbjct: 77 FLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136
Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
V+K G + +L+S+Y S + DA +FD + DR +TW ++ +GY T+ H EA
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
+ F M G + V V+ C +L + + + + + +RT L+
Sbjct: 197 IDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL 256
Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
Y+KCGKME A +F M E KD+V+W+ MI G+ N + F QM +E ++P+ F+
Sbjct: 257 YAKCGKMEKARSVFDSMVE-KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 385 YSIILTAQPAVSPFQVH----AHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
L++ ++ + + I + + + + AL++ Y K G + +VF+ +
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK 375
Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
EKDIV +A ++G A+ G + + ++ Q G+ P+ TF ++ C + +
Sbjct: 376 EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR 435
Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQH 559
F+A S L + +V ++ + G ++ A + R + + W +++ G
Sbjct: 436 FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLV 495
Query: 560 GHTKKALEVFKEM 572
T+ A V KE+
Sbjct: 496 KDTQLAETVLKEL 508
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/727 (33%), Positives = 392/727 (53%), Gaps = 90/727 (12%)
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
Q H ++K+G + + LI+ Y DA V + D +++S++ +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
L ++ F+ M G ++ K+CA ++ +Q+H +G+D D ++
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
+ Y +CG+M DA K+F M + KDVV+ +A++ + + G ++ V +M G+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSD-KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 380 PNGFTYSIILTA-------QPAVSPFQ--------------------------------V 400
N +++ IL+ + AV FQ +
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 401 HAHIIKTNYEKSFSVGTALL---------------------------NAYV----KKGIL 429
H ++IK K V +A++ NAY+ + G++
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 430 DEAAKVFELIDEK----DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSV 485
D+A ++FEL E+ ++V+W++++AG AQ G A++++R++ GVKPN T S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 486 INACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRD 545
+ AC AA+ G+ H +++ L + + V SAL+ MY+K G I + VF ++
Sbjct: 395 LPAC-GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 546 LVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFD 605
LV WNS++ G++ HG K+ + +F+ + R L+ D I+F +++AC GL DEG +YF
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL---- 661
+M E+ I P +EHYSCMV+L RAG L++A D+I MPF + VW +L +CRL
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 662 ----------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
L+P + YVLLSN+YAA G W E +R M +KK G SWI+V
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
KN+ Y+ LAGD SHPQ +QI K++E+S ++ +G++P+ + L D++++ +E +L HS
Sbjct: 634 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHS 693
Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
E+LA+ FGL+ TP G PLQ++KNLR+CGDCH VIK IS R+I +RDTNRFHHFK+G+
Sbjct: 694 EKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGI 753
Query: 832 CSCGDYW 838
CSCGD+W
Sbjct: 754 CSCGDFW 760
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/532 (22%), Positives = 231/532 (43%), Gaps = 80/532 (15%)
Query: 99 QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
Q H +KSG D +S L+ Y N D V + + + S++SL+ + K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
+ + + +F RM G+ P+S + V A+ Q+H + +G ++ V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSIT------------------------------- 247
++ MY++ + DAR VFD M D+D +T
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 248 ----WNSMVAGYVTNELHMEA---FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLAR 300
WN +++G+ + H EA F+ +++G ++T S SV+ ++ L + R
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS---SVLPSVGDSEMLNMGR 272
Query: 301 QLHSQVLKNGIDFDHNIRTGLMVAYSKCGK------------------------------ 330
+H V+K G+ D + + ++ Y K G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 331 -MEDASKIFSMMREMK---DVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
++ A ++F + +E +VVSWT++I+G QNG A+ F +M GV+PN T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
+L A ++ H ++ + + VG+AL++ Y K G ++ + VF ++ K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
++V W++++ G++ G + + I+ L +KP+ +F+S+++AC E K F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMI 553
S + + L S +V + + G ++ A ++ K + D W +++
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 137/635 (21%), Positives = 256/635 (40%), Gaps = 130/635 (20%)
Query: 39 PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
P ++ L++ + L +++ +F + GL L ++ K C L G+
Sbjct: 77 PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGK 136
Query: 99 QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN------------------ 140
Q+HC SG D V S+ +YMR + D R+VFD M+
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG 196
Query: 141 -----------------ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
E+N+VSW +LSG+ R+ + + +F ++ G P+ T S
Sbjct: 197 CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS 256
Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVF------ 237
+VL + D ++ +H VIK G V +A+I MY KS V ++F
Sbjct: 257 SVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMM 316
Query: 238 --------------DGMEDR---------------DSITWNSMVAGYVTNELHMEAFETF 268
+G+ D+ + ++W S++AG N +EA E F
Sbjct: 317 EAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELF 376
Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
M +AG + T S++ C L R H ++ + + ++ + L+ Y+KC
Sbjct: 377 REMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC 436
Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
G++ + +F+MM K++V W ++++G +G ++ F + R ++P+ ++
Sbjct: 437 GRINLSQIVFNMM-PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF--- 492
Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK-----D 443
T+LL+A + G+ DE K F+++ E+
Sbjct: 493 ----------------------------TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR 524
Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS----AAVEQG 499
+ +S M+ + G + A + +++ E P+ + +++N+C + A +
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDSCVWGALLNSCRLQNNVDLAEIAAE 581
Query: 500 KQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSW-------NSM 552
K FH L A M+++ +I + E +K SW ++
Sbjct: 582 KLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGL-KKNPGCSWIQVKNRVYTL 640
Query: 553 ICGYAQHGH----TKKALEVFKEMR----RQDLEF 579
+ G H T+K E+ KEMR R +L+F
Sbjct: 641 LAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDF 675
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 36 DRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHV 95
+++ + N V + ++ ++ EAL LF ++ G+ T+ S+L CG +
Sbjct: 346 EQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALG 405
Query: 96 FGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYA 155
GR H V+ +V+V ++L+D+Y + + + VF+ M N+V W SL++G++
Sbjct: 406 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFS 465
Query: 156 RNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV-----LADEG 193
+ V+ +F + +KP+ +F+++L L DEG
Sbjct: 466 MHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/658 (35%), Positives = 378/658 (57%), Gaps = 21/658 (3%)
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
Q+H ++ G + + LI + AR VFD + WN+++ GY N
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
+A ++NM LA TF ++K C+ L++ R +H+QV + G D D ++
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 320 GLMVAYSKCGKMEDASKIF-SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
GL+ Y+KC ++ A +F + + +VSWTA++S + QNG A+ F QM + V
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 379 RPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
+P+ +L A + + +HA ++K E + +L Y K G + A
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
+F+ + +++ W+AM++GYA+ G A+ ++ ++ ++ V+P+ + +S I+AC A
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC-AQVG 337
Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
++EQ + + ++ + + +SSAL+ M++K G++E A VF R RD+V W++MI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
GY HG ++A+ +++ M R + + +TF+G++ AC H+G+V EG +F+ M +H I
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKIN 456
Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR-------------- 660
P +HY+C++DL RAG L++A ++I MP TVW +L+AC+
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
L S+ P ++ YV LSN+YAA W A VR M ++ + K+ G SW+EV+ + +F
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 721 GDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGL 780
GD SHP+ +I ++E + +RLK+ G+ + L D++DE E L HSER+AIA+GL
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGL 636
Query: 781 VATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
++TP G PL+I KNLR C +CH KLISKL R+IVVRDTNRFHHFK+G+CSCGDYW
Sbjct: 637 ISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 217 bits (552), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 238/473 (50%), Gaps = 9/473 (1%)
Query: 98 RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
+Q+H + G + T L+ ++ R+VFDD+ + W +++ GY+RN
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVC 217
L ++ MQ+ + P+SFTF +L + + VH V + G + V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 218 NALISMYLKSKMVRDARAVFDG--MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAG 275
N LI++Y K + + AR VF+G + +R ++W ++V+ Y N MEA E F+ M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 276 AELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
+ VSV+ ++L+ R +H+ V+K G++ + ++ L Y+KCG++ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
+F M+ +++ W AMISG+ +NG A++ F +M + VRP+ + + ++A V
Sbjct: 278 ILFDKMKS-PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 396 SPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
+ ++ ++ +++Y + +AL++ + K G ++ A VF+ ++D+V WSAM+
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
GY G A+ +YR + GV PN+ TF ++ AC S V +G F K+
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH-SGMVREGWWFFNRMADHKI 455
Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTK 563
N + ++ + + G+++ A EV K + V+ W +++ +H H +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 177/362 (48%), Gaps = 3/362 (0%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +FD P+ +N ++ Y R++ Q+AL ++ ++ + T +LK C L
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--DMNESNVVSWTS 149
GR VH + + GF DV V L+ LY + + R VF+ + E +VSWT+
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
++S YA+N LE+F +M+ +KP+ +VL + +H V+K G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
E+ + +L +MY K V A+ +FD M+ + I WN+M++GY N EA + F+
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
M + S I CA L AR ++ V ++ D I + L+ ++KCG
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
+E A +F + +DVV W+AMI G+ +G A++ + M R GV PN T+ +L
Sbjct: 373 SVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 390 TA 391
A
Sbjct: 432 MA 433
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 153/328 (46%)
Query: 39 PQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGR 98
P+R V + ++ Y ++ EAL +F +R++ + L SVL CL D GR
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 99 QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
+H VK G + ++ SL +Y + V + +FD M N++ W +++SGYA+N
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCN 218
+++FH M + ++P++ + ++ + A G + A ++ V ++ + +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362
Query: 219 ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAEL 278
ALI M+ K V AR VFD DRD + W++M+ GY + EA + M G
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
TF+ ++ C + +R +++ + I+ ++ + G ++ A ++
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLA 366
M V W A++S ++ ++L
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELG 510
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 148/302 (49%), Gaps = 33/302 (10%)
Query: 374 TREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
T G+ + F S+I +A Q+HA ++ + S + T L++A G + A
Sbjct: 14 TNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFAR 73
Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPS 493
+VF+ + I W+A++ GY++ + A+ +Y + V P+ FTF ++ AC+ S
Sbjct: 74 QVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLS 133
Query: 494 AAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK--RQRKRDLVSWNS 551
++ G+ HA + + + V + L+ +Y+K + SA VF+ +R +VSW +
Sbjct: 134 -HLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 552 MICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACT-----------HAGLVDEG 600
++ YAQ+G +ALE+F +MR+ D++ D + + V+ A T HA +V G
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 601 QQY-FDIMVNEHHIY------------------PTMEHYSCMVDLYSRAGMLEKAMDIIN 641
+ D++++ + +Y P + ++ M+ Y++ G +A+D+ +
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 642 RM 643
M
Sbjct: 313 EM 314
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 262/744 (35%), Positives = 418/744 (56%), Gaps = 25/744 (3%)
Query: 29 KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
K + LF + V +N ++ + + A+ F +R+ + STL SVL
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 89 GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
G + + G VH E +K G A ++ V +SLV +Y + +E +VF+ + E N V W
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
+++ GYA N + +V+ELF M+ G + FTF+++L A + Q H+++IK
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
V NAL+ MY K + DAR +F+ M DRD++TWN+++ YV +E EAF+ F
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
M L G + S +K C L +Q+H +K G+D D + + L+ YSKC
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
G ++DA K+FS + E VVS A+I+G+ QN ++ AV F +M GV P+ T++ I
Sbjct: 578 GIIKDARKVFSSLPEWS-VVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATI 635
Query: 389 LTA----QPAVSPFQVHAHIIKTNYEKSFS-VGTALLNAYVKKGILDEAAKVF-ELIDEK 442
+ A + Q H I K + +G +LL Y+ + EA +F EL K
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK 695
Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
IV W+ M++G++Q G E A+K Y+++ +GV P++ TF +V+ C+ S ++ +G+
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS-SLREGRAI 754
Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR-DLVSWNSMICGYAQHGH 561
H+ + S+ L+ MY+K G+++ +S+VF R+R ++VSWNS+I GYA++G+
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
+ AL++F MR+ + D ITF+GV+TAC+HAG V +G++ F++M+ ++ I ++H +
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874
Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPH 667
CMVDL R G L++A D I A +W ++L ACR LI L+P
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ 934
Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
+S+ YVLLSN+YA+ G W++ +RK+M DR VKK GYSWI+V+ +T+ F AGD SH +
Sbjct: 935 NSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSE 994
Query: 728 SNQIYSKLEELSTRLK-DAGYKPD 750
+I LE+L +K DA PD
Sbjct: 995 IGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 269 bits (687), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 276/552 (50%), Gaps = 43/552 (7%)
Query: 97 GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
G+ VH + + G + + ++VDLY + V + FD + E +V +W S+LS Y+
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
+VL F + I PN FTFS VL A E V Q+H +IK G E +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
AL+ MY K + DAR VF+ + D +++ W + +GYV L EA F M G
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
FV+VI Y + GK++DA
Sbjct: 258 RPDHLAFVTVIN-----------------------------------TYIRLGKLKDARL 282
Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVS 396
+F M DVV+W MISGH + G +A+ +F M + V+ T +L+A V+
Sbjct: 283 LFGEMSS-PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 397 PFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
VHA IK + VG++L++ Y K ++ AAKVFE ++EK+ V W+AM+
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
GYA G++ ++++ + S G ++FTF+S+++ C A S +E G QFH+ IK KL
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA-SHDLEMGSQFHSIIIKKKLA 460
Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
L V +ALV MY+K G +E A ++F+R RD V+WN++I Y Q + +A ++FK M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
+ DG + ACTH + +G+Q + V + + + S ++D+YS+ G+
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV-KCGLDRDLHTGSSLIDMYSKCGI 579
Query: 633 LEKAMDIINRMP 644
++ A + + +P
Sbjct: 580 IKDARKVFSSLP 591
Score = 266 bits (680), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 264/528 (50%), Gaps = 42/528 (7%)
Query: 80 TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
T S VL TC + FGRQ+HC +K G R+ +LVD+Y + + + D RRVF+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
+ N V WT L SGY + + + + +F RM+ EG +P+ F TV
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV-------------- 267
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
I+ Y++ ++DAR +F M D + WN M++G+
Sbjct: 268 ---------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
A E F NM + + TRST SV+ L L +H++ +K G+ + + +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
L+ YSKC KME A+K+F + E DV W AMI G+ NG + F M G
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
+ FT++ +L+ A Q H+ IIK K+ VG AL++ Y K G L++A ++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
FE + ++D V W+ ++ Y Q + A +++++ G+ + +S + ACT
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH-G 544
Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
+ QGKQ H S+K L+ L S+L+ MYSK G I+ A +VF + +VS N++I G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQY 603
Y+Q+ + ++A+ +F+EM + + ITF ++ AC + G Q+
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Score = 249 bits (636), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 290/549 (52%), Gaps = 16/549 (2%)
Query: 117 TSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK 176
++++ Y+R ++D R +F +M+ +VV+W ++SG+ + +E F M+ +K
Sbjct: 265 VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 177 PNSFTFSTVLGVLADEGIVAT---AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDA 233
T +VL + GIVA + VH IK G V ++L+SMY K + + A
Sbjct: 325 STRSTLGSVLSAI---GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA 381
Query: 234 RAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATT 293
VF+ +E+++ + WN+M+ GY N + E F +M +G + TF S++ CA +
Sbjct: 382 AKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 294 KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAM 353
+L + Q HS ++K + + + L+ Y+KCG +EDA +IF M + +D V+W +
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTI 500
Query: 354 ISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNY 409
I ++Q+ A + F +M G+ +G + L A V QVH +K
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL 560
Query: 410 EKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQ 469
++ G++L++ Y K GI+ +A KVF + E +V+ +A++AGY+Q + E AV ++++
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQE 619
Query: 470 LTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN-ALCVSSALVTMY-SK 527
+ + GV P+E TF++++ AC P ++ G QFH K ++ + +L+ MY +
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPE-SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
+G E+ + + + +V W M+ G++Q+G ++AL+ +KEMR + D TF+ V
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
+ C+ + EG+ ++ + H + + ++D+Y++ G ++ + + + M +
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTS-NTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Query: 648 SATVWRTVL 656
+ W +++
Sbjct: 798 NVVSWNSLI 806
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 42/309 (13%)
Query: 296 LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
LR+ + +HS+ L GID + + ++ Y+KC ++ A K F + KDV +W +M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAWNSMLS 133
Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILT--AQPAVSPF--QVHAHIIKTNYEK 411
+ G + F + + PN FT+SI+L+ A+ F Q+H +IK E+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
+ G AL++ Y K + +A +VFE I + + V W+ + +GY + G E AV ++ ++
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
EG +P+ F +VIN Y + G +
Sbjct: 254 DEGHRPDHLAFVTVINT------------------------------------YIRLGKL 277
Query: 532 ESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
+ A +F D+V+WN MI G+ + G A+E F MR+ ++ T V++A
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 592 THAGLVDEG 600
+D G
Sbjct: 338 GIVANLDLG 346
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 27/362 (7%)
Query: 400 VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGD 459
VH+ + + +G A+++ Y K + A K F+ + EKD+ AW++ML+ Y+ IG
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGK 140
Query: 460 TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSS 519
++ + L + PN+FTFS V++ C A VE G+Q H IK L
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTC-ARETNVEFGRQIHCSMIKMGLERNSYCGG 199
Query: 520 ALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEF 579
ALV MY+K I A VF+ + V W + GY + G ++A+ VF+ MR +
Sbjct: 200 ALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP 259
Query: 580 DGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDI 639
D + F+ VI G + + + F M + P + ++ M+ + + G A++
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEY 314
Query: 640 INRM---PFAASATVWRTVLAACRLIS-----LQPHDSAIYV-LLSNMYAATGHWQERAR 690
M ++ + +VL+A +++ L H AI + L SN+Y + ++
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 691 VRKLMNDRKVKKEAGYSWIEVKNKTY--SFLAGDISHPQSNQIYSKLEELSTRLKDAGYK 748
K+ KV + +E KN + + + G + +S+ K+ EL +K +GY
Sbjct: 375 CEKMEAAAKV-----FEALEEKNDVFWNAMIRGYAHNGESH----KVMELFMDMKSSGYN 425
Query: 749 PD 750
D
Sbjct: 426 ID 427
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/593 (38%), Positives = 362/593 (61%), Gaps = 22/593 (3%)
Query: 266 ETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAY 325
E M + G E+ + +++ C + LR +++H+ ++K +RT L++ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
KC +EDA K+ M E K+VVSWTAMIS + Q G A+ F +M R +PN FT+
Sbjct: 98 GKCDCLEDARKVLDEMPE-KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 386 SIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDE 441
+ +LT+ S Q+H I+K NY+ VG++LL+ Y K G + EA ++FE + E
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 442 KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ 501
+D+V+ +A++AGYAQ+G E A++++ +L SEG+ PN T++S++ A + A ++ GKQ
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSG-LALLDHGKQ 275
Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
H ++ +L + ++L+ MYSK GN+ A +F +R +SWN+M+ GY++HG
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 562 TKKALEVFKEMRRQD-LEFDGITFIGVITACTHAGLVDEGQQYFDIMV-NEHHIYPTMEH 619
++ LE+F+ MR + ++ D +T + V++ C+H + D G FD MV E+ P EH
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQ 665
Y C+VD+ RAG +++A + I RMP +A V ++L ACR LI ++
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 666 PHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISH 725
P ++ YV+LSN+YA+ G W + VR +M + V KE G SWI+ + + F A D +H
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 515
Query: 726 PQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPA 785
P+ ++ +K++E+S ++K AGY PD S VL D+D+E KE +L HSE+LA+ FGL+AT
Sbjct: 516 PRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGE 575
Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
G P+++ KNLR+C DCH K+ SK+ R++ +RD NRFH +G+CSCGDYW
Sbjct: 576 GIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 179/361 (49%), Gaps = 11/361 (3%)
Query: 35 FDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC---GCL 91
F SP ++ + + C + QEAL L + LG + ++L C L
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRAL 68
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
D G++VH +K+ + + T L+ Y + + +ED R+V D+M E NVVSWT+++
Sbjct: 69 RD---GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 125
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
S Y++ + L +F M KPN FTF+TVL + Q+H +++K +
Sbjct: 126 SRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
V ++L+ MY K+ +++AR +F+ + +RD ++ +++AGY L EA E F+ +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKM 331
G T+ S++ + L +Q H VL+ + F ++ L+ YSKCG +
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 332 EDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILT 390
A ++F M E + +SW AM+ G+ ++G + F M E V+P+ T +L+
Sbjct: 306 SYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 391 A 391
Sbjct: 365 G 365
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 141/266 (53%), Gaps = 16/266 (6%)
Query: 18 PPKSLRSP---FYSKKD-----QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI 69
P LR+ FY K D + + D P++N V + ++ Y + EAL +F +
Sbjct: 85 PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 144
Query: 70 RRL-GLP---LFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR 125
R G P F + L+S ++ G G+Q+H VK + + V +SL+D+Y +
Sbjct: 145 MRSDGKPNEFTFATVLTSCIRASGL----GLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 200
Query: 126 TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
+++ R +F+ + E +VVS T++++GYA+ +++ LE+FHR+ EG+ PN T++++
Sbjct: 201 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASL 260
Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
L L+ ++ Q H V++ + N+LI MY K + AR +FD M +R +
Sbjct: 261 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA 320
Query: 246 ITWNSMVAGYVTNELHMEAFETFNNM 271
I+WN+M+ GY + L E E F M
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLM 346
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 10/174 (5%)
Query: 29 KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
K+ + +F+ P+R+ V ++ Y + L +EAL +F + G+ T +S+L
Sbjct: 205 KEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL 264
Query: 89 G--CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVS 146
L DH G+Q HC ++ + SL+D+Y + N+ RR+FD+M E +S
Sbjct: 265 SGLALLDH--GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 147 WTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVL-----GVLADEGI 194
W ++L GY+++ + VLELF M+ E +KP++ T VL G + D G+
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 264/802 (32%), Positives = 422/802 (52%), Gaps = 24/802 (2%)
Query: 54 CRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDV 113
C + +EA+ L ++ L + + ++++ C G +V+ + S + V
Sbjct: 70 CANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGV 129
Query: 114 NVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM-QV 172
+ + + +++R N+ D VF M+E N+ SW L+ GYA+ D + L+HRM V
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWV 189
Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
G+KP+ +TF VL +A +VH V++ G E+ V NALI+MY+K V+
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 233 ARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCAT 292
AR +FD M RD I+WN+M++GY N + E E F M + T SVI C
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
+ RL R +H+ V+ G D ++ L Y G +A K+FS M E KD+VSWT
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKDIVSWTT 368
Query: 353 MISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTN 408
MISG+ N D A++ + M ++ V+P+ T + +L+A + ++H IK
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 409 YEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
V L+N Y K +D+A +F I K++++W++++AG A+ R
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 469 QLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKK 528
Q+ ++PN T ++ + A A A+ GK+ HA ++ + + +AL+ MY +
Sbjct: 489 QMKMT-LQPNAITLTAALAA-CARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRC 546
Query: 529 GNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVI 588
G + +A F Q+K D+ SWN ++ GY++ G +E+F M + + D ITFI ++
Sbjct: 547 GRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLL 605
Query: 589 TACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAAS 648
C+ + +V +G YF M ++ + P ++HY+C+VDL RAG L++A I +MP
Sbjct: 606 CGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPD 664
Query: 649 ATVWRTVLAACRL--------------ISLQPHDSAIYVLLSNMYAATGHWQERARVRKL 694
VW +L ACR+ L Y+LL N+YA G W+E A+VR++
Sbjct: 665 PAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRM 724
Query: 695 MNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
M + + +AG SW+EVK K ++FL+ D HPQ+ +I + LE ++ + G +
Sbjct: 725 MKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESS 784
Query: 755 LQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERR 814
D + ++ I HSER AIAFGL+ T G P+ + KNL +C +CH +K ISK RR
Sbjct: 785 SMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRR 844
Query: 815 DIVVRDTNRFHHFKEGLCSCGD 836
+I VRD FHHFK+G CSCGD
Sbjct: 845 EISVRDAEHFHHFKDGECSCGD 866
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/761 (33%), Positives = 393/761 (51%), Gaps = 123/761 (16%)
Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED--------------- 242
A VH +I G + + N LI +Y KS + AR +FD + +
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 243 ------------------RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
RD++ +N+M+ G+ N A F M G + TF
Sbjct: 93 SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFA 152
Query: 285 SVIK-LCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK----MEDASKIFS 339
SV+ L + + Q H+ LK+G + ++ L+ YSKC + A K+F
Sbjct: 153 SVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFD 212
Query: 340 MMREMKDVVSWTAMISGHLQNGAIDL--------------------------------AV 367
+ E KD SWT M++G+++NG DL A+
Sbjct: 213 EILE-KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEAL 271
Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAY 423
+M G+ + FTY ++ A Q VHA++++ + SF +L++ Y
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLY 330
Query: 424 VKKGILDEAAKVFELIDEKDIVAWSAMLAGY----------------------------- 454
K G DEA +FE + KD+V+W+A+L+GY
Sbjct: 331 YKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390
Query: 455 --AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
A+ G E +K++ + EG +P ++ FS I +C A A G+Q+HA +K +
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC-AVLGAYCNGQQYHAQLLKIGFD 449
Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
++L +AL+TMY+K G +E A +VF+ D VSWN++I QHGH +A++V++EM
Sbjct: 450 SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM 509
Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGM 632
++ + D IT + V+TAC+HAGLVD+G++YFD M + I P +HY+ ++DL R+G
Sbjct: 510 LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGK 569
Query: 633 LEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNM 678
A +I +PF +A +W +L+ CR L L P Y+LLSNM
Sbjct: 570 FSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNM 629
Query: 679 YAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEEL 738
+AATG W+E ARVRKLM DR VKKE SWIE++ + ++FL D SHP++ +Y L++L
Sbjct: 630 HAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689
Query: 739 STRLKDAGYKPDTSYVLQDID-DEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
++ GY PDTS+VL D++ D HKE +L+ HSE++A+AFGL+ P G ++I KNLR
Sbjct: 690 GKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRT 749
Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
CGDCH + +S + +RDI++RD RFHHF+ G CSCG++W
Sbjct: 750 CGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 169/650 (26%), Positives = 287/650 (44%), Gaps = 148/650 (22%)
Query: 71 RLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVE 130
RL LPL ++L R VH + GF ++ L+D+Y +++ +
Sbjct: 20 RLCLPLRRTSLQ-------------LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELN 66
Query: 131 DGRRVFDDMNESNVVSWTSLLSGYARNK---------------MNDRVL----------- 164
R++FD+++E + ++ T+++SGY + M D V+
Sbjct: 67 YARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHN 126
Query: 165 -------ELFHRMQVEGIKPNSFTFSTVLGVLA----DEGIVATAVQVHTMVIKNGGEVV 213
LF +M+ EG KP++FTF++VL LA DE VQ H +K+G +
Sbjct: 127 NDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDE---KQCVQFHAAALKSGAGYI 183
Query: 214 TSVCNALISMYLK----SKMVRDARAVFDGMEDRDSITW--------------------- 248
TSV NAL+S+Y K ++ AR VFD + ++D +W
Sbjct: 184 TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 249 -----------NSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
N+M++GYV + EA E M +G EL T+ SVI+ CAT L+
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303
Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMM---------------- 341
L +Q+H+ VL+ DF + L+ Y KCGK ++A IF M
Sbjct: 304 LGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYV 362
Query: 342 ------------REMKD--VVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSI 387
+EMK+ ++SW MISG +NG + + F M REG P + +S
Sbjct: 363 SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422
Query: 388 ILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKD 443
+ + + + Q HA ++K ++ S S G AL+ Y K G+++EA +VF + D
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 482
Query: 444 IVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQ-F 502
V+W+A++A Q G AV +Y ++ +G++P+ T +V+ AC+ + V+QG++ F
Sbjct: 483 SVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH-AGLVDQGRKYF 541
Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGH 561
+ ++ + L+ + + G A V + + W +++ G HG+
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEH 611
+ +G+I A GL+ E + ++ N H
Sbjct: 602 ME---------------------LGIIAADKLFGLIPEHDGTYMLLSNMH 630
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 213/482 (44%), Gaps = 110/482 (22%)
Query: 283 FVSVIKLCATTKE--LRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
+ + ++LC + L+LAR +H ++ G +I L+ Y K ++ A ++F
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 341 MRE--------------------------------MKDVVSWTAMISGHLQNGAIDLAVN 368
+ E M+D V + AMI+G N A+N
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 369 FFCQMTREGVRPNGFTYSIILTAQPAVSP-----FQVHAHIIKTNYEKSFSVGTALLNAY 423
FC+M EG +P+ FT++ +L V+ Q HA +K+ SV AL++ Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 424 VK----KGILDEAAKVFELIDEKD--------------------------------IVAW 447
K +L A KVF+ I EKD +VA+
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 448 SAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
+AM++GY G + A+++ R++ S G++ +EFT+ SVI AC A + ++ GKQ HA +
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC-ATAGLLQLGKQVHAYVL 313
Query: 508 KAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALE 567
+ + + + ++LV++Y K G + A +F++ +DLVSWN+++ GY GH +A
Sbjct: 314 R-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 568 VFKE-------------------------------MRRQDLEFDGITFIGVITACTHAGL 596
+FKE M+R+ E F G I +C G
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
GQQY ++ + ++ + ++ +Y++ G++E+A + MP S + W ++
Sbjct: 433 YCNGQQYHAQLL-KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WNALI 490
Query: 657 AA 658
AA
Sbjct: 491 AA 492
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 226/513 (44%), Gaps = 92/513 (17%)
Query: 32 QSLFDRSP--QRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
+ +F+++P R+ V YN ++ + ++ A+NLF ++ G T +SVL
Sbjct: 100 RGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 90 CLF-DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNN----VEDGRRVFDDMNESNV 144
+ D Q H +KSG +VS +LV +Y + + + R+VFD++ E +
Sbjct: 160 LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDE 219
Query: 145 VSWTSLLSGYARN-----------KMNDRV---------------------LELFHRMQV 172
SWT++++GY +N M+D + LE+ RM
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 173 EGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRD 232
GI+ + FT+ +V+ A G++ QVH V++ + N+L+S+Y K +
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDE 338
Query: 233 ARAVFDGMEDRDSITWNSMVAGYVT-------------------------------NELH 261
ARA+F+ M +D ++WN++++GYV+ N
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398
Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
E + F+ M G E F IK CA +Q H+Q+LK G D + L
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNAL 458
Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
+ Y+KCG +E+A ++F M + D VSW A+I+ Q+G AV+ + +M ++G+RP+
Sbjct: 459 ITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 382 GFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTA------------LLNAYVKKGIL 429
T +LTA HA ++ + S+ T L++ + G
Sbjct: 518 RITLLTVLTACS-------HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKF 570
Query: 430 DEAAKVFELIDEKDIVA-WSAMLAGYAQIGDTE 461
+A V E + K W A+L+G G+ E
Sbjct: 571 SDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 155/358 (43%), Gaps = 35/358 (9%)
Query: 43 FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHC 102
V YN ++ Y +QEAL + + G+ L T SV++ C G+QVH
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 103 ---------------------ECVKSGFAR---------DVNVSTSLVDLYMRTNNVEDG 132
+C K AR D+ +L+ Y+ + ++ +
Sbjct: 311 YVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 133 RRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADE 192
+ +F +M E N++SW ++SG A N + L+LF M+ EG +P + FS + A
Sbjct: 371 KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVL 430
Query: 193 GIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMV 252
G Q H ++K G + S NALI+MY K +V +AR VF M DS++WN+++
Sbjct: 431 GAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALI 490
Query: 253 AGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQ---VLKN 309
A + EA + + M G R T ++V+ C+ + R+ V +
Sbjct: 491 AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRI 550
Query: 310 GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
DH R L+ + GK DA + + W A++SG +G ++L +
Sbjct: 551 PPGADHYAR--LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/713 (34%), Positives = 403/713 (56%), Gaps = 39/713 (5%)
Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHT---MVI 206
L+S K+N+ E M G+ +S+++ + + ++ +H M I
Sbjct: 55 LVSLSKHRKLNE-AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGI 113
Query: 207 KNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFE 266
+N ++ N ++ MY + + + DA +FD M + ++++ +M++ Y + +A
Sbjct: 114 ENPSVLLQ---NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170
Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
F+ M +G + S + +++K + L RQ+H+ V++ G+ + +I TG++ Y
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYS 386
KCG + A ++F M +K V+ T ++ G+ Q G A+ F + EGV + F +S
Sbjct: 231 KCGWLVGAKRVFDQM-AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFS 289
Query: 387 IILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
++L A ++ Q+HA + K E SVGT L++ Y+K + A + F+ I E
Sbjct: 290 VVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREP 349
Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP-NEFTFSSVINACTAPSAAVEQGKQ 501
+ V+WSA+++GY Q+ E AVK ++ L S+ N FT++S+ AC+ A G Q
Sbjct: 350 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL-ADCNIGGQ 408
Query: 502 FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGH 561
HA +IK L + SAL+TMYSK G ++ A+EVF+ D+V+W + I G+A +G+
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 562 TKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS 621
+AL +F++M ++ + +TFI V+TAC+HAGLV++G+ D M+ ++++ PT++HY
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528
Query: 622 CMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPH 667
CM+D+Y+R+G+L++A+ + MPF A W+ L+ C L L P
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588
Query: 668 DSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQ 727
D+A YVL N+Y G W+E A + KLMN+R +KKE SWI+ K K + F+ GD HPQ
Sbjct: 589 DTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQ 648
Query: 728 SNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVAT--PA 785
+ +IY KL+E ++ ++ + + E +E +L HSERLAIAFGL++ A
Sbjct: 649 TQEIYEKLKEFDGFMEGDMFQCNMT--------ERREQLL-DHSERLAIAFGLISVHGNA 699
Query: 786 GAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
AP+++ KNLR C DCH K +S + +IV+RD+ RFHHFKEG CSC DYW
Sbjct: 700 PAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 233 bits (594), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 163/556 (29%), Positives = 282/556 (50%), Gaps = 14/556 (2%)
Query: 61 EALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFAR-DVNVSTSL 119
EA + + G+ + + + + C L GR +H + ++ G V + +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQNCV 124
Query: 120 VDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNS 179
+ +Y ++ED ++FD+M+E N VS T+++S YA + D+ + LF M G KP S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 180 FTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDG 239
++T+L L + + Q+H VI+ G TS+ +++MY+K + A+ VFD
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 240 MEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
M + + ++ GY +A + F ++ G E F V+K CA+ +EL L
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
+Q+H+ V K G++ + ++ T L+ Y KC E A + F +RE D VSW+A+ISG+ Q
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND-VSWSAIISGYCQ 363
Query: 360 NGAIDLAVNFFCQM-TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFS 414
+ AV F + ++ N FTY+ I A ++ QVHA IK + S
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 415 VGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEG 474
+AL+ Y K G LD+A +VFE +D DIVAW+A ++G+A G+ A++++ ++ S G
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483
Query: 475 VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS--SALVTMYSKKGNIE 532
+KPN TF +V+ AC+ + VEQGK ++ K N A + ++ +Y++ G ++
Sbjct: 484 MKPNSVTFIAVLTACSH-AGLVEQGKHCLDTMLR-KYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 533 SASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITAC 591
A + K + D +SW + G H + + +E+R+ D E D ++
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE-DTAGYVLPFNLY 600
Query: 592 THAGLVDEGQQYFDIM 607
T AG +E + +M
Sbjct: 601 TWAGKWEEAAEMMKLM 616
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 162/345 (46%), Gaps = 18/345 (5%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +FD+ + V L+ Y + ++AL LF+ + G+ S VLK C L
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
+ G+Q+H K G +V+V T LVD Y++ ++ E R F ++ E N VSW++++
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKP-NSFTFSTVL---GVLADEGIVATAVQVHTMVIK 207
SGY + + ++ F ++ + NSFT++++ VLAD I QVH IK
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNI---GGQVHADAIK 415
Query: 208 N---GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
G + S ALI+MY K + DA VF+ M++ D + W + ++G+ EA
Sbjct: 416 RSLIGSQYGES---ALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472
Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKN---GIDFDHNIRTGL 321
F M G + TF++V+ C+ + + +L+ DH +
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDH--YDCM 530
Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
+ Y++ G +++A K M D +SW +SG + ++L
Sbjct: 531 IDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELG 575
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/625 (38%), Positives = 362/625 (57%), Gaps = 35/625 (5%)
Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
D +WNS++A + EA F++M TRS+F IK C++ ++ +Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
Q G D + + L+V YS CGK+EDA K+F + + +++VSWT+MI G+ NG
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMIRGYDLNGNA 158
Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ-------------VHAHIIKTNYE 410
AV+ F + V N ++ L + VS +H+ +IK ++
Sbjct: 159 LDAVSLFKDLL---VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 411 KSFSVGTALLNAYVK--KGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYR 468
+ SVG LL+AY K +G + A K+F+ I +KD V+++++++ YAQ G + A +++R
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 469 QLTSEGVKP-NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
+L V N T S+V+ A + S A+ GK H I+ L + + V ++++ MY K
Sbjct: 276 RLVKNKVVTFNAITLSTVLLA-VSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
G +E+A + F R + +++ SW +MI GY HGH KALE+F M + + ITF+ V
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAA 647
+ AC+HAGL EG ++F+ M + P +EHY CMVDL RAG L+KA D+I RM
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 648 SATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRK 693
+ +W ++LAACR L L + Y+LLS++YA G W++ RVR
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514
Query: 694 LMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSY 753
+M +R + K G+S +E+ + + FL GD HPQ +IY L EL+ +L +AGY +TS
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574
Query: 754 VLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLER 813
V D+D+E KE L HSE+LAIAFG++ T G+ + +VKNLRVC DCH VIKLISK+
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVD 634
Query: 814 RDIVVRDTNRFHHFKEGLCSCGDYW 838
R+ VVRD RFHHFK+G CSCGDYW
Sbjct: 635 REFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 219/438 (50%), Gaps = 19/438 (4%)
Query: 33 SLFDRSPQRNFV-EYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+LF+R + V +N ++ + R EAL F +R+L L S+ +K C L
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
FD G+Q H + G+ D+ VS++L+ +Y +ED R+VFD++ + N+VSWTS++
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVL----ADEGIVATAV--QVHTMV 205
GY N + LF + V+ + F +G++ A + A + +H+ V
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 206 IKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVTNELHME 263
IK G + SV N L+ Y K V AR +FD + D+D +++NS+++ Y + + E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 264 AFETFNNMGLAGAELTRSTFVSVIKLCAT-TKELRLARQLHSQVLKNGIDFDHNIRTGLM 322
AFE F + + +S + L + + LR+ + +H QV++ G++ D + T ++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 323 VAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNG 382
Y KCG++E A K F M+ K+V SWTAMI+G+ +G A+ F M GVRPN
Sbjct: 330 DMYCKCGRVETARKAFDRMKN-KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 383 FTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL------LNAYVKKGILDEAAKVF 436
T+ +L A + + V + F V L ++ + G L +A +
Sbjct: 389 ITFVSVLAA-CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLI 447
Query: 437 ELIDEK-DIVAWSAMLAG 453
+ + K D + WS++LA
Sbjct: 448 QRMKMKPDSIIWSSLLAA 465
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 169/348 (48%), Gaps = 16/348 (4%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGI------RRLGLPLFGSTLSSVL 85
+ +FD P+RN V + ++ Y + +A++LF + + L L SV+
Sbjct: 131 RKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190
Query: 86 KTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR--TNNVEDGRRVFDDMNESN 143
C + +H +K GF R V+V +L+D Y + V R++FD + + +
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250
Query: 144 VVSWTSLLSGYARNKMNDRVLELFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVH 202
VS+ S++S YA++ M++ E+F R+ + + + N+ T STVL ++ G + +H
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310
Query: 203 TMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM 262
VI+ G E V ++I MY K V AR FD M++++ +W +M+AGY +
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 263 EAFETFNNMGLAGAELTRSTFVSVIKLCATTK-ELRLARQLHSQVLKNGID--FDHNIRT 319
+A E F M +G TFVSV+ C+ + R ++ + G++ +H
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH---Y 427
Query: 320 GLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
G MV + G ++ A + M+ D + W+++++ + ++LA
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/699 (33%), Positives = 390/699 (55%), Gaps = 61/699 (8%)
Query: 196 ATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGY 255
+ A Q+H I+ TS + +IS+Y K++ +A +F ++ + W S++ +
Sbjct: 22 SQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 256 VTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
L +A +F M +G + F SV+K C +LR +H +++ G+D D
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 316 NIRTGLMVAYSKCGKMEDASKIFSMMREM------------------------------- 344
LM Y+K M + ++ EM
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 345 ----KDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-- 398
KDVVS+ +I+G+ Q+G + A+ +M ++P+ FT S +L P S +
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL---PIFSEYVD 257
Query: 399 -----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
++H ++I+ + +G++L++ Y K ++++ +VF + +D ++W++++AG
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 454 YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNN 513
Y Q G A++++RQ+ + VKP FSSVI AC A A + GKQ H ++ +
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC-AHLATLHLGKQLHGYVLRGGFGS 376
Query: 514 ALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
+ ++SALV MYSK GNI++A ++F R D VSW ++I G+A HGH +A+ +F+EM+
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 574 RQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGML 633
RQ ++ + + F+ V+TAC+H GLVDE YF+ M + + +EHY+ + DL RAG L
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 634 EKAMDIINRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMY 679
E+A + I++M + +VW T+L++C ++ ++ + YVL+ NMY
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556
Query: 680 AATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELS 739
A+ G W+E A++R M + ++K+ SWIE+KNKT+ F++GD SHP ++I L+ +
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVM 616
Query: 740 TRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCG 799
+++ GY DTS VL D+D+EHK +L HSERLA+AFG++ T G +++ KN+R+C
Sbjct: 617 EQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICT 676
Query: 800 DCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
DCH IK ISK+ R+I+VRD +RFHHF G CSCGDYW
Sbjct: 677 DCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/474 (30%), Positives = 224/474 (47%), Gaps = 66/474 (13%)
Query: 53 YCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD 112
+ SL +AL F+ +R G + SVLK+C + D FG VH V+ G D
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 113 VNVSTSLVDLY--------------------MRTNN----------------VEDGRRVF 136
+ +L+++Y RT+N ++ RRVF
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 137 DDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVA 196
+ M +VVS+ ++++GYA++ M + L + M +KP+SFT S+VL + ++ V
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259
Query: 197 TAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYV 256
++H VI+ G + + ++L+ MY KS + D+ VF + RD I+WNS+VAGYV
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 257 TNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
N + EA F M A + F SVI CA L L +QLH VL+ G +
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
I + L+ YSKCG ++ A KIF M + D VSWTA+I GH +G AV+ F +M R+
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 377 GVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF 436
GV+PN + +LTA H ++ + G + KV+
Sbjct: 439 GVKPNQVAFVAVLTACS-------HVGLVDEAW-----------------GYFNSMTKVY 474
Query: 437 ELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
L E + A A L G A G E A Y ++ V+P +S+++++C+
Sbjct: 475 GLNQELEHYAAVADLLGRA--GKLEEA---YNFISKMCVEPTGSVWSTLLSSCS 523
Score = 145 bits (367), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 184/400 (46%), Gaps = 38/400 (9%)
Query: 25 PFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSV 84
PF + +F+ P+++ V YN ++ Y + ++++AL + + L TLSSV
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 85 LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNV 144
L D + G+++H ++ G DV + +SLVD+Y ++ +ED RVF + +
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 145 VSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTM 204
+SW SL++GY +N + L LF +M +KP + FS+V+ A + Q+H
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 205 VIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEA 264
V++ G + +AL+ MY K ++ AR +FD M D ++W +++ G+ + EA
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 265 FETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA 324
F M G + + FV+V+ C+ GL+
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACS--------------------------HVGLV-- 460
Query: 325 YSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFT 384
G +K++ + +E++ + ++ + G ++ A NF +M V P G
Sbjct: 461 DEAWGYFNSMTKVYGLNQELEHYAAVADLLG---RAGKLEEAYNFISKMC---VEPTGSV 514
Query: 385 YSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
+S +L++ ++ + EK F+V + + AYV
Sbjct: 515 WSTLLSSCSVHKNLELAEKVA----EKIFTVDSENMGAYV 550
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 191/408 (46%), Gaps = 50/408 (12%)
Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
+++ ++IK K A+QLH+Q ++ H + ++ Y+ + +A +F
Sbjct: 4 SKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLF 62
Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF 398
++ V++W ++I A+ F +M G P+ + +L + +
Sbjct: 63 KTLKS-PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 399 Q----VHAHIIKTNYEKSFSVGTALLNAYVK----------KGILDEAA----------- 433
+ VH I++ + G AL+N Y K + DE
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 434 ---------------KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPN 478
+VFE++ KD+V+++ ++AGYAQ G E A+++ R++ + +KP+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 479 EFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVF 538
FT SSV+ + V +GK+ H I+ +++ + + S+LV MY+K IE + VF
Sbjct: 242 SFTLSSVL-PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 539 KRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVD 598
R RD +SWNS++ GY Q+G +AL +F++M ++ + F VI AC H +
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 599 EGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRM 643
G+Q ++ +I+ S +VD+YS+ G ++ A I +RM
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIA----SALVDMYSKCGNIKAARKIFDRM 404
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/691 (35%), Positives = 383/691 (55%), Gaps = 54/691 (7%)
Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRD---ARAVFDGMEDRDSITWNSMVAGYVT 257
+H +IK G + LI + S A +VF +++ + + WN+M G+
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
+ + A + + M G TF V+K CA +K + +Q+H VLK G D D +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 318 RTGLMVAYSKCGKMEDASKIF--SMMREM----------------------------KDV 347
T L+ Y + G++EDA K+F S R++ KDV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAH 403
VSW AMISG+ + G A+ F M + VRP+ T +++A QVH
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 404 IIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGA 463
I + + + AL++ Y K G L+ A +FE + KD+++W+ ++ GY + + A
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 464 VKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK--AKLNNALCVSSAL 521
+ +++++ G PN+ T S++ AC A A++ G+ H K + NA + ++L
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPAC-AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDG 581
+ MY+K G+IE+A +VF + L SWN+MI G+A HG + ++F MR+ ++ D
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 582 ITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIIN 641
ITF+G+++AC+H+G++D G+ F M ++ + P +EHY CM+DL +G+ ++A ++IN
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 530
Query: 642 RMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQE 687
M +W ++L AC+ LI ++P + YVLLSN+YA+ G W E
Sbjct: 531 MMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNE 590
Query: 688 RARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGY 747
A+ R L+ND+ +KK G S IE+ + + F+ GD HP++ +IY LEE+ L+ AG+
Sbjct: 591 VAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGF 650
Query: 748 KPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKL 807
PDTS VLQ++++E KE L HSE+LAIAFGL++T G L IVKNLRVC +CH KL
Sbjct: 651 VPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKL 710
Query: 808 ISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
ISK+ +R+I+ RD RFHHF++G+CSC DYW
Sbjct: 711 ISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 233/516 (45%), Gaps = 45/516 (8%)
Query: 98 RQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDMNESNVVSWTSLLSGY 154
R +H + +K G + L++ + + + E VF + E N++ W ++ G+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
A + L+L+ M G+ PNS+TF VL A Q+H V+K G ++
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDR------------------------------- 243
V +LISMY+++ + DA VFD R
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
D ++WN+M++GY + EA E F +M ST V+V+ CA + + L RQ+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
+ +G + I L+ YSKCG++E A +F + KDV+SW +I G+
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL-PYKDVISWNTLIGGYTHMNLY 348
Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK--TNYEKSFSVGT 417
A+ F +M R G PN T IL A + +H +I K + S+ T
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
+L++ Y K G ++ A +VF I K + +W+AM+ G+A G + + ++ ++ G++P
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 478 NEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
++ TF +++AC+ S ++ G+ F + K+ L ++ + G + A E
Sbjct: 469 DDITFVGLLSACSH-SGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 537 VFKRQRKR-DLVSWNSMICGYAQHGHTKKALEVFKE 571
+ D V W S++ HG+ + E F E
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNVELG-ESFAE 562
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 189/408 (46%), Gaps = 34/408 (8%)
Query: 33 SLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLF 92
S+F + N + +N + + S AL L++ + LGL T VLK+C
Sbjct: 89 SVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK 148
Query: 93 DHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD--------------- 137
G+Q+H +K G D+ V TSL+ +Y++ +ED +VFD
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 138 ----------------DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFT 181
++ +VVSW +++SGYA LELF M ++P+ T
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
TV+ A G + QVH + +G + NALI +Y K + A +F+ +
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
+D I+WN+++ GY L+ EA F M +G T +S++ CA + + R
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 302 LHSQVLK--NGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
+H + K G+ ++RT L+ Y+KCG +E A ++F+ + K + SW AMI G
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH-KSLSSWNAMIFGFAM 447
Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
+G D + + F +M + G++P+ T+ +L+A + HI +T
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 9/356 (2%)
Query: 20 KSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS 79
K S Y + Q LFD P ++ V +N ++ Y ++EAL LF + + + S
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 80 TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
T+ +V+ C GRQVH GF ++ + +L+DLY + +E +F+ +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
+V+SW +L+ GY + L LF M G PN T ++L A G +
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Query: 200 QVHTMVIK--NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
+H + K G +S+ +LI MY K + A VF+ + + +WN+M+ G+
Sbjct: 388 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH---SQVLKNGIDFD 314
+ +F+ F+ M G + TFV ++ C+ + L L R + +Q K +
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLE 507
Query: 315 HNIRTGLMV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNF 369
H G M+ G ++A ++ +MM D V W +++ +G ++L +F
Sbjct: 508 H---YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/641 (35%), Positives = 369/641 (57%), Gaps = 23/641 (3%)
Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
N+LI++Y+K + AR +FD M +R+ ++W +M+ GY + E + F +M +G E
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSG-E 131
Query: 278 LTRSTFVS--VIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDAS 335
+ FV+ V K C+ + + +Q H LK G+ +R L+ YS C +A
Sbjct: 132 SRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI 191
Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY----SIILTA 391
++ + D+ +++ +SG+L+ GA ++ + E N TY +
Sbjct: 192 RVLDDL-PYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 392 QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAML 451
+ QVH+ +++ + AL+N Y K G + A +VF+ ++I + ++
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 452 AGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKL 511
Y Q E A+ ++ ++ ++ V PNE+TF+ ++N+ A + ++QG H +K+
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNS-IAELSLLKQGDLLHGLVLKSGY 369
Query: 512 NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKE 571
N + V +ALV MY+K G+IE A + F RD+V+WN+MI G + HG ++ALE F
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 572 MRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAG 631
M + ITFIGV+ AC+H G V++G YF+ ++ + + P ++HY+C+V L S+AG
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 632 MLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVLLSN 677
M + A D + P WRT+L AC + I P+DS +YVLLSN
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSN 549
Query: 678 MYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEE 737
++A + W+ A+VR LMN+R VKKE G SWI ++N+T+ FLA D HP+ IY+K++E
Sbjct: 550 IHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKE 609
Query: 738 LSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRV 797
+ +++K GY PD + D+D+E +E LS HSE+LA+A+GL+ TP +PL + KN+R+
Sbjct: 610 VMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRI 669
Query: 798 CGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
C DCH+ IKLISK+ +R IV+RD+NRFHHF +G CSC DYW
Sbjct: 670 CDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 234/489 (47%), Gaps = 12/489 (2%)
Query: 75 PLFGSTLSSVLKTCGCLFDHVFGRQVHCECV---KSGFARDVNVSTSLVDLYMRTNNVED 131
P L+ +LK C G +H + +S A D SL++LY++
Sbjct: 28 PFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR 87
Query: 132 GRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLA 190
R++FD M E NVVSW +++ GY + + VL+LF M G +PN F + V +
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
+ G + Q H +K G V N L+ MY +A V D + D ++S
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
++GY+ E + T++S ++L + ++L LA Q+HS++++ G
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG 267
Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
+ + L+ Y KCGK+ A ++F +++ T ++ + Q+ + + A+N F
Sbjct: 268 FNAEVEACGALINMYGKCGKVLYAQRVFDDT-HAQNIFLNTTIMDAYFQDKSFEEALNLF 326
Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKK 426
+M + V PN +T++I+L + +S + +H ++K+ Y VG AL+N Y K
Sbjct: 327 SKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
G +++A K F + +DIV W+ M++G + G A++ + ++ G PN TF V+
Sbjct: 387 GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVL 446
Query: 487 NACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-KR 544
AC+ VEQG F+ K + + + +V + SK G + A + + +
Sbjct: 447 QACSHI-GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW 505
Query: 545 DLVSWNSMI 553
D+V+W +++
Sbjct: 506 DVVAWRTLL 514
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 16/319 (5%)
Query: 53 YCRDSLHQEALNLFL--GIRRLGLPLFGSTLS-----------SVLKTCGCLFDHVFGRQ 99
YC S+ AL+ +L G + GL + T + S L+ L D Q
Sbjct: 199 YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQ 258
Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
VH V+ GF +V +L+++Y + V +RVFDD + N+ T+++ Y ++K
Sbjct: 259 VHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKS 318
Query: 160 NDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNA 219
+ L LF +M + + PN +TF+ +L +A+ ++ +H +V+K+G V NA
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378
Query: 220 LISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELT 279
L++MY KS + DAR F GM RD +TWN+M++G + L EA E F+ M G
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438
Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR--TGLMVAYSKCGKMEDASKI 337
R TF+ V++ C+ + +Q++K D +I+ T ++ SK G +DA
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAGMFKDAEDF 497
Query: 338 FSMMREMKDVVSWTAMISG 356
DVV+W +++
Sbjct: 498 MRTAPIEWDVVAWRTLLNA 516
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 186/430 (43%), Gaps = 10/430 (2%)
Query: 30 KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVL-KTC 88
+ + LFD P+RN V + ++ Y E L LF + G +++V+ K+C
Sbjct: 87 RARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSC 146
Query: 89 GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
G+Q H +K G V +LV +Y + + RV DD+ ++ ++
Sbjct: 147 SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206
Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKN 208
S LSGY L++ + E N+ T+ + L + ++ + A+QVH+ +++
Sbjct: 207 SALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRF 266
Query: 209 GGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETF 268
G C ALI+MY K V A+ VFD ++ +++ Y ++ EA F
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLF 326
Query: 269 NNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKC 328
+ M TF ++ A L+ LH VLK+G + L+ Y+K
Sbjct: 327 SKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKS 386
Query: 329 GKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSII 388
G +EDA K FS M +D+V+W MISG +G A+ F +M G PN T+ +
Sbjct: 387 GSIEDARKAFSGM-TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445
Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID-------E 441
L A + + H K F V + + G+L +A + D E
Sbjct: 446 LQACSHIGFVEQGLHYF-NQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 442 KDIVAWSAML 451
D+VAW +L
Sbjct: 505 WDVVAWRTLL 514
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/793 (31%), Positives = 413/793 (52%), Gaps = 79/793 (9%)
Query: 96 FGRQVHCECVKSGFAR-DVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGY 154
G +H +K G D V ++ + Y R ++ ++FD+M + + ++W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 155 ARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVT 214
R+ ++ +ELF MQ G K T +L V +++ A Q+H V++ G E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDR------------------------------- 243
S+CN+LI MY ++ + +R VF+ M+DR
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 244 ----DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLA 299
D +TWNS+++GY + L +A M +AG + + S+ S+++ A L+L
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 300 RQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
+ +H +L+N + +D + T L+ Y K G + A +F MM + K++V+W +++SG
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM-DAKNIVAWNSLVSGLSY 303
Query: 360 NGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTAL 419
+ A +M +EG++P+ T++ S + G A
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWN-------------------------SLASGYAT 338
Query: 420 LNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
L K LD K+ E ++V+W+A+ +G ++ G+ A+K++ ++ EGV PN
Sbjct: 339 LGKPEKA--LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNA 396
Query: 480 FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
T S+++ S + GK+ H ++ L V++ALV MY K G+++SA E+F
Sbjct: 397 ATMSTLLKILGCLSL-LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455
Query: 540 RQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDE 599
+ + L SWN M+ GYA G ++ + F M +E D ITF V++ C ++GLV E
Sbjct: 456 GIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 600 GQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC 659
G +YFD+M + + I PT+EH SCMVDL R+G L++A D I M AT+W L++C
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSC 575
Query: 660 --------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAG 705
RL L+PH+SA Y+++ N+Y+ W++ R+R LM + +V+ +
Sbjct: 576 KIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDL 635
Query: 706 YSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEA 765
+SWI++ + F A +HP IY +L +L + +K +GY PDTS + QDI D KE
Sbjct: 636 WSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEK 695
Query: 766 ILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFH 825
+L H+E+LA+ +GL+ AP+++VKN +C D HTV K +S L R+IV+++ R H
Sbjct: 696 LLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVH 755
Query: 826 HFKEGLCSCGDYW 838
HF++G CSC D W
Sbjct: 756 HFRDGKCSCNDSW 768
Score = 203 bits (516), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 151/583 (25%), Positives = 256/583 (43%), Gaps = 78/583 (13%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
LFD P+R+ + +N ++ R ++A+ LF ++ G + ST+ +L+ C
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG 104
Query: 94 HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL-- 151
GRQ+H ++ G +V++ SL+ +Y R +E R+VF+ M + N+ SW S+L
Sbjct: 105 FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSS 164
Query: 152 ---------------------------------SGYARNKMNDRVLELFHRMQVEGIKPN 178
SGYA ++ + + RMQ+ G+KP+
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
+ + S++L +A+ G + +H +++N V LI MY+K+ + AR VFD
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 239 GMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRL 298
M+ ++ + WNS+V+ GL+ A L L+
Sbjct: 285 MMDAKNIVAWNSLVS------------------GLSYACL-----------------LKD 309
Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE---MKDVVSWTAMIS 355
A L ++ K GI D L Y+ GK E A + M+E +VVSWTA+ S
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 356 GHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEK 411
G +NG A+ F +M EGV PN T S +L +S +VH ++ N
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 412 SFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLT 471
V TAL++ Y K G L A ++F I K + +W+ ML GYA G E + + +
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 472 SEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNI 531
G++P+ TF+SV++ C E K F + + + S +V + + G +
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 532 ESASEVFKRQR-KRDLVSWNSMICGYAQHGHTKKALEVFKEMR 573
+ A + + K D W + + H + A +K ++
Sbjct: 550 DEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQ 592
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 357/578 (61%), Gaps = 20/578 (3%)
Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
R+ +++LCA + A+ H ++++ ++ D + L+ AYSKCG +E A ++F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQ----PA 394
M E + +VSW MI + +N A++ F +M EG + + FT S +L+A A
Sbjct: 120 DGMLE-RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDA 178
Query: 395 VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGY 454
+ ++H +KT + + VGTALL+ Y K G++ +A +VFE + +K V WS+M+AGY
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238
Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
Q + E A+ +YR+ ++ N+FT SSVI AC+ +A +E GKQ HA K+ +
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE-GKQMHAVICKSGFGSN 297
Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
+ V+S+ V MY+K G++ + +F ++++L WN++I G+A+H K+ + +F++M++
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
+ + +TF +++ C H GLV+EG+++F +M + + P + HYSCMVD+ RAG+L
Sbjct: 358 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 417
Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
+A ++I +PF +A++W ++LA+CR L L+P ++ +VLLSN+YA
Sbjct: 418 EAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 477
Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
A W+E A+ RKL+ D VKK G SWI++K+K ++F G+ HP+ +I S L+ L
Sbjct: 478 ANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVI 537
Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
+ + GYKP + L D++ KE +L QHSE+LA+ FGL+ P +P++I+KNLR+C D
Sbjct: 538 KFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVD 597
Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
CH +K S RR I+VRD NRFHHF +G CSCGD+W
Sbjct: 598 CHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 176/322 (54%), Gaps = 6/322 (1%)
Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
+L + A G V A H +I+ E ++ N LI+ Y K V AR VFDGM +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
++WN+M+ Y N + EA + F M G + + T SV+ C + ++LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
+K ID + + T L+ Y+KCG ++DA ++F M++ K V+W++M++G++QN +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD-KSSVTWSSMVAGYVQNKNYE 245
Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALL 420
A+ + + R + N FT S ++ A ++ Q+HA I K+ + + V ++ +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 421 NAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEF 480
+ Y K G L E+ +F + EK++ W+ +++G+A+ + + ++ ++ +G+ PNE
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 481 TFSSVINACTAPSAAVEQGKQF 502
TFSS+++ C + VE+G++F
Sbjct: 366 TFSSLLSVC-GHTGLVEEGRRF 386
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 206/421 (48%), Gaps = 11/421 (2%)
Query: 97 GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYAR 156
+ H + ++ DV + L++ Y + VE R+VFD M E ++VSW +++ Y R
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 157 NKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSV 216
N+M L++F M+ EG K + FT S+VL ++H + +K ++ V
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGA 276
AL+ +Y K M++DA VF+ M+D+ S+TW+SMVAGYV N+ + EA +
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259
Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASK 336
E + T SVI C+ L +Q+H+ + K+G + + + + Y+KCG + ++
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319
Query: 337 IFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QP 393
IFS ++E K++ W +ISG ++ + F +M ++G+ PN T+S +L+
Sbjct: 320 IFSEVQE-KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 394 AVSPFQVHAHIIKTNYEKSFSV--GTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAM 450
V + +++T Y S +V + +++ + G+L EA ++ + I + W ++
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 451 LAG---YAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSI 507
LA Y + E A + +L E N S++ A + K C +
Sbjct: 439 LASCRVYKNLELAEVAAEKLFELEPENAG-NHVLLSNIYAANKQWEEIAKSRKLLRDCDV 497
Query: 508 K 508
K
Sbjct: 498 K 498
Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 146/271 (53%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +FD +R+ V +N ++ Y R+ + EAL++FL +R G T+SSVL CG
Sbjct: 116 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVN 175
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
D + +++HC VK+ ++ V T+L+DLY + ++D +VF+ M + + V+W+S++
Sbjct: 176 CDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMV 235
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
+GY +NK + L L+ R Q ++ N FT S+V+ ++ + Q+H ++ K+G
Sbjct: 236 AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
V ++ + MY K +R++ +F +++++ WN++++G+ + E F M
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Query: 272 GLAGAELTRSTFVSVIKLCATTKELRLARQL 302
G TF S++ +C T + R+
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 368/647 (56%), Gaps = 29/647 (4%)
Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAE 277
N ++ Y K + AR +FD + D++++N++++GY A F M G E
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 278 LTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKI 337
+ T +I C + L +QLH + G D ++ + YSK G + +A +
Sbjct: 138 VDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 338 FSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP 397
F M E++D VSW +MI + Q+ A+ + +M +G + + FT + +L A ++
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 398 F----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILD---EAAKVFELIDEKDIVAWSAM 450
Q H +IK + ++ VG+ L++ Y K G D ++ KVF+ I D+V W+ M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 451 LAGYAQIGD-TEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
++GY+ + +E AVK +RQ+ G +P++ +F V +AC+ S+ Q KQ H +IK+
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP-SQCKQIHGLAIKS 374
Query: 510 KL-NNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
+ +N + V++AL+++Y K GN++ A VF R + + VS+N MI GYAQHGH +AL +
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
++ M + + ITF+ V++AC H G VDEGQ+YF+ M I P EHYSCM+DL
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
RAG LE+A I+ MP+ + W +L ACR L+ +QP + YV+
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVM 554
Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
L+NMYA W+E A VRK M ++++K+ G SWIEVK K + F+A D SHP ++
Sbjct: 555 LANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614
Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI---LSQHSERLAIAFGLVATPAGAPLQI 791
LEE+ ++K GY D + + D+ + L HSE+LA+AFGL++T G L +
Sbjct: 615 LEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVV 674
Query: 792 VKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
VKNLR+CGDCH IK +S + R+I+VRD RFH FK+G CSCGDYW
Sbjct: 675 VKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 256/508 (50%), Gaps = 27/508 (5%)
Query: 73 GLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTS---------LVDLY 123
G L + S++ + L +H ++ +C + +AR ST +V Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFV--NLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAY 84
Query: 124 MRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFS 183
+ + + R++FD++ + + VS+ +L+SGYA + + LF RM+ G + + FT S
Sbjct: 85 AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMED- 242
++ D V Q+H + G + +SV NA ++ Y K ++R+A +VF GM++
Sbjct: 145 GLIAACCDR--VDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDEL 202
Query: 243 RDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQL 302
RD ++WNSM+ Y ++ +A + M G ++ T SV+ + L RQ
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 303 HSQVLKNGIDFDHNIRTGLMVAYSKCG---KMEDASKIFSMMREMKDVVSWTAMISGHLQ 359
H +++K G + ++ +GL+ YSKCG M D+ K+F + D+V W MISG+
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS-PDLVVWNTMISGYSM 321
Query: 360 NGAI-DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSP----FQVHAHIIKTNYEKS-F 413
N + + AV F QM R G RP+ ++ + +A +S Q+H IK++ +
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381
Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
SV AL++ Y K G L +A VF+ + E + V+++ M+ GYAQ G A+ +Y+++
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQ-FHACSIKAKLNNALCVSSALVTMYSKKGNIE 532
G+ PN+ TF +V++AC A V++G++ F+ K+ S ++ + + G +E
Sbjct: 442 GIAPNKITFVAVLSAC-AHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLE 500
Query: 533 SASEVFKRQ-RKRDLVSWNSMICGYAQH 559
A K V+W +++ +H
Sbjct: 501 EAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 207/434 (47%), Gaps = 15/434 (3%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ LFD PQ + V YN L+ Y A+ LF +R+LG + G TLS ++ C
Sbjct: 94 RQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR 153
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE-SNVVSWTSL 150
D + +Q+HC V GF +V+ + V Y + + + VF M+E + VSW S+
Sbjct: 154 VDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSM 211
Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
+ Y ++K + L L+ M +G K + FT ++VL L + Q H +IK G
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 211 EVVTSVCNALISMYLK---SKMVRDARAVFDGMEDRDSITWNSMVAGYVTN-ELHMEAFE 266
+ V + LI Y K + D+ VF + D + WN+M++GY N EL EA +
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVK 331
Query: 267 TFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDH-NIRTGLMVAY 325
+F M G +FV V C+ +Q+H +K+ I + ++ L+ Y
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLY 391
Query: 326 SKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTY 385
K G ++DA +F M E+ + VS+ MI G+ Q+G A+ + +M G+ PN T+
Sbjct: 392 YKSGNLQDARWVFDRMPEL-NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITF 450
Query: 386 SIILTAQP---AVSPFQVHAHIIKTNY--EKSFSVGTALLNAYVKKGILDEAAKVFELID 440
+L+A V Q + + +K + E + +++ + G L+EA + + +
Sbjct: 451 VAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP 510
Query: 441 EK-DIVAWSAMLAG 453
K VAW+A+L
Sbjct: 511 YKPGSVAWAALLGA 524
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 20/245 (8%)
Query: 26 FYSK--------KDQSLFDRSPQRNFVEYNRLLFEYC-RDSLHQEALNLFLGIRRLGLPL 76
FYSK + +F + V +N ++ Y + L +EA+ F ++R+G
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 77 FGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARD-VNVSTSLVDLYMRTNNVEDGRRV 135
+ V C L +Q+H +KS + ++V+ +L+ LY ++ N++D R V
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 136 FDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLA----- 190
FD M E N VS+ ++ GYA++ L L+ RM GI PN TF VL A
Sbjct: 404 FDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKV 463
Query: 191 DEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR-DSITWN 249
DEG T I+ E + +I + ++ + +A D M + S+ W
Sbjct: 464 DEGQEYFNTMKETFKIEPEAEHYS----CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519
Query: 250 SMVAG 254
+++
Sbjct: 520 ALLGA 524
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 48/198 (24%)
Query: 499 GKQFHACSIKAKLNNALCVSSALVTMYSKKG----------------------------- 529
GK HA +K+ + ++ +S+ V +YSK G
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 530 --NIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
I A ++F + D VS+N++I GYA T A+ +FK MR+ E DG T G+
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 588 ITACTHAGLVDEGQQYFDIMVNEHHIYPT---MEHYS----CMVDLYSRAGMLEKAMDII 640
I AC VD ++ + H + + YS V YS+ G+L +A+ +
Sbjct: 147 IAACCDR--VD--------LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 641 NRMPFAASATVWRTVLAA 658
M W +++ A
Sbjct: 197 YGMDELRDEVSWNSMIVA 214
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/693 (35%), Positives = 381/693 (54%), Gaps = 56/693 (8%)
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKM--VRDARAVFDGMEDRDSITWNSMVAGYVT 257
Q H +I+ G + L +M S + AR VFD + +S WN+++ Y +
Sbjct: 48 QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 258 NELHMEAFETFNNM-GLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
+ + F +M + + TF +IK A L L + LH +K+ + D
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVF 167
Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
+ L+ Y CG ++ A K+F+ ++E KDVVSW +MI+G +Q G+ D A+ F +M E
Sbjct: 168 VANSLIHCYFSCGDLDSACKVFTTIKE-KDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 377 GVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
V+ + T +L+A + QV ++I + + ++ A+L+ Y K G +++A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV--------------KPN 478
++F+ ++EKD V W+ ML GYA D E A ++ + + + KPN
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 479 E------------------FTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSA 520
E T S ++AC A A+E G+ H+ K + V+SA
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSAC-AQVGALELGRWIHSYIKKHGIRMNFHVTSA 405
Query: 521 LVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFD 580
L+ MYSK G++E + EVF KRD+ W++MI G A HG +A+++F +M+ +++ +
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
G+TF V AC+H GLVDE + F M + + I P +HY+C+VD+ R+G LEKA+ I
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 641 NRMPFAASATVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQ 686
MP S +VW +L AC RL+ L+P + +VLLSN+YA G W+
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWE 585
Query: 687 ERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAG 746
+ +RK M +KKE G S IE+ + FL+GD +HP S ++Y KL E+ +LK G
Sbjct: 586 NVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645
Query: 747 YKPDTSYVLQDIDDEH-KEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVI 805
Y+P+ S VLQ I++E KE L+ HSE+LAI +GL++T A ++++KNLRVCGDCH+V
Sbjct: 646 YEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVA 705
Query: 806 KLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
KLIS+L R+I+VRD RFHHF+ G CSC D+W
Sbjct: 706 KLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 229/493 (46%), Gaps = 59/493 (11%)
Query: 21 SLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS- 79
S S Y++K +FD P+ N +N L+ Y ++ FL +
Sbjct: 76 SFASLEYARK---VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKY 132
Query: 80 TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
T ++K + G+ +H VKS DV V+ SL+ Y +++ +VF +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAV 199
E +VVSW S+++G+ + D+ LELF +M+ E +K + T VL A +
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 200 QVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
QV + + +N V ++ NA++ MY K + DA+ +FD ME++D++TW +M+ GY +E
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 260 LHMEAFETFNNM---------GLAGA-----------------------ELTRSTFVSVI 287
+ A E N+M L A +L + T VS +
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 288 KLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDV 347
CA L L R +HS + K+GI + ++ + L+ YSKCG +E + ++F+ + E +DV
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EKRDV 431
Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA---QPAVSPFQVHAHI 404
W+AMI G +G + AV+ F +M V+PNG T++ + A V + H
Sbjct: 432 FVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQ 491
Query: 405 IKTNY-----EKSFSVGTALLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIG 458
+++NY EK ++ +++ + G L++A K E + W A+L
Sbjct: 492 MESNYGIVPEEKHYA---CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL------- 541
Query: 459 DTEGAVKIYRQLT 471
GA KI+ L
Sbjct: 542 ---GACKIHANLN 551
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 214/446 (47%), Gaps = 42/446 (9%)
Query: 98 RQVHCECVKSGFARDVNVSTSLVDLYMRTN--NVEDGRRVFDDMNESNVVSWTSLLSGYA 155
+Q H +++G D ++ L + ++ ++E R+VFD++ + N +W +L+ YA
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 156 RNKMNDRVLEL--FHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEV 212
D VL + F M E PN +TF ++ A+ ++ +H M +K+
Sbjct: 107 SGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS 164
Query: 213 VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMG 272
V N+LI Y + A VF ++++D ++WNSM+ G+V +A E F M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 273 LAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
+ + T V V+ CA + L RQ+ S + +N ++ + + ++ Y+KCG +E
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 333 DASKIFSMMRE------------------------------MKDVVSWTAMISGHLQNGA 362
DA ++F M E KD+V+W A+IS + QNG
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 363 IDLAVNFFCQMT-REGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGT 417
+ A+ F ++ ++ ++ N T L+A V + +H++I K +F V +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
AL++ Y K G L+++ +VF ++++D+ WSAM+ G A G AV ++ ++ VKP
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 478 NEFTFSSVINACTAPSAAVEQGKQFH 503
N TF++V AC+ E FH
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFH 490
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 210/443 (47%), Gaps = 49/443 (11%)
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
L + F+N RS +S+I+ C + ++L+ Q H +++ G D +
Sbjct: 10 LSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSAS 66
Query: 320 GL--MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
L M A S +E A K+F + + + +W +I + L++ F M E
Sbjct: 67 KLFAMAALSSFASLEYARKVFDEIPK-PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 125
Query: 378 -VRPNGFTYSIILTAQPAVSPFQV----HAHIIKTNYEKSFSVGTALLNAYVKKGILDEA 432
PN +T+ ++ A VS + H +K+ V +L++ Y G LD A
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 185
Query: 433 AKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAP 492
KVF I EKD+V+W++M+ G+ Q G + A+++++++ SE VK + T V++AC A
Sbjct: 186 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC-AK 244
Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
+E G+Q + + ++N L +++A++ MY+K G+IE A +F ++D V+W +M
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 553 ICGYA-------------------------------QHGHTKKALEVFKEMRRQ-DLEFD 580
+ GYA Q+G +AL VF E++ Q +++ +
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLN 364
Query: 581 GITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDII 640
IT + ++AC G ++ G ++ + +H I S ++ +YS+ G LEK+ ++
Sbjct: 365 QITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 423
Query: 641 N----RMPFAASATVWRTVLAAC 659
N R F SA + + C
Sbjct: 424 NSVEKRDVFVWSAMIGGLAMHGC 446
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 33/366 (9%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
+F +++ V +N ++ + + +AL LF + + T+ VL C + +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 94 HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
FGRQV ++ ++ ++ +++D+Y + ++ED +R+FD M E + V+WT++L G
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 154 YA-------------------------------RNKMNDRVLELFHRMQVE-GIKPNSFT 181
YA +N + L +FH +Q++ +K N T
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
+ L A G + +H+ + K+G + V +ALI MY K + +R VF+ +E
Sbjct: 368 LVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE 427
Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ 301
RD W++M+ G + EA + F M A + TF +V C+ T + A
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 302 LHSQVLKN-GIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQN 360
L Q+ N GI + ++ + G +E A K M W A++ +
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Query: 361 GAIDLA 366
++LA
Sbjct: 548 ANLNLA 553
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 233/681 (34%), Positives = 382/681 (56%), Gaps = 28/681 (4%)
Query: 184 TVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
++L V +G+ QVH ++K+G + N LI MY K + A VFD M +R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
+ ++W+++++G+V N + F+ MG G TF + +K C L Q+H
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
LK G + + L+ YSKCG++ +A K+F + + + ++SW AMI+G + G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYG 189
Query: 364 DLAVNFFCQMTREGV--RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYE--KSFSV 415
A++ F M + RP+ FT + +L A + Q+H ++++ + S ++
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 416 GTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGV 475
+L++ YVK G L A K F+ I EK +++WS+++ GYAQ G+ A+ ++++L
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 476 KPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESAS 535
+ + F SS+I A A + QGKQ A ++K V +++V MY K G ++ A
Sbjct: 310 QIDSFALSSIIGV-FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 536 EVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAG 595
+ F + +D++SW +I GY +HG KK++ +F EM R ++E D + ++ V++AC+H+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 596 LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTV 655
++ EG++ F ++ H I P +EHY+C+VDL RAG L++A +I+ MP + +W+T+
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 656 LAACR--------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVK 701
L+ CR L+ + + A YV++SN+Y G+W E+ R+L N + +K
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 702 KEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDA-GYKPDTSYVLQDIDD 760
KEAG SW+E++ + + F +G+ SHP + I L+E RL++ GY + L DIDD
Sbjct: 549 KEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDD 608
Query: 761 EHKEAILSQHSERLAIAFGLVA---TPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIV 817
E KE L HSE+LAI L G +++ KNLRVC DCH IK +SK+ + V
Sbjct: 609 ESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYV 668
Query: 818 VRDTNRFHHFKEGLCSCGDYW 838
VRD RFH F++G CSCGDYW
Sbjct: 669 VRDAVRFHSFEDGCCSCGDYW 689
Score = 219 bits (558), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 261/513 (50%), Gaps = 24/513 (4%)
Query: 80 TLSSVLKTC--GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFD 137
L S+L+ C L D G QVHC +KSG ++ S L+D+Y + +VFD
Sbjct: 8 NLVSILRVCTRKGLSDQ--GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 138 DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVAT 197
M E NVVSW++L+SG+ N L LF M +GI PN FTFST L +
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 198 AVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT 257
+Q+H +K G E++ V N+L+ MY K + +A VF + DR I+WN+M+AG+V
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 258 NELHMEAFETFNNMGLAGAELTRSTF--VSVIKLCATTKELRLARQLHSQVLKNGIDFDH 315
+A +TF M A + F S++K C++T + +Q+H ++++G
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 316 N--IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM 373
+ I L+ Y KCG + A K F ++E K ++SW+++I G+ Q G A+ F ++
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 374 TREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGIL 429
+ + F S I+ + Q+ A +K SV ++++ Y+K G++
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 430 DEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINAC 489
DEA K F + KD+++W+ ++ GY + G + +V+I+ ++ ++P+E + +V++AC
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 490 TAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR-K 543
+ S +++G++ + IK ++ + CV V + + G ++ A + K
Sbjct: 425 S-HSGMIKEGEELFSKLLETHGIKPRVEHYACV----VDLLGRAGRLKEAKHLIDTMPIK 479
Query: 544 RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQD 576
++ W +++ HG + EV K + R D
Sbjct: 480 PNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 512
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 197/373 (52%), Gaps = 8/373 (2%)
Query: 23 RSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS 82
R P + K +FD P+RN V ++ L+ + + + +L+LF + R G+ T S
Sbjct: 55 REPLMAYK---VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFS 111
Query: 83 SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
+ LK CG L G Q+H C+K GF V V SLVD+Y + + + +VF + +
Sbjct: 112 TNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDR 171
Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIK--PNSFTFSTVLGVLADEGIVATAVQ 200
+++SW ++++G+ + L+ F MQ IK P+ FT +++L + G++ Q
Sbjct: 172 SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQ 231
Query: 201 VHTMVIKNGGEVVTS--VCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
+H ++++G +S + +L+ +Y+K + AR FD ++++ I+W+S++ GY
Sbjct: 232 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQE 291
Query: 259 ELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIR 318
+EA F + +++ S+I + A LR +Q+ + +K + ++
Sbjct: 292 GEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL 351
Query: 319 TGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGV 378
++ Y KCG +++A K F+ M ++KDV+SWT +I+G+ ++G +V F +M R +
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410
Query: 379 RPNGFTYSIILTA 391
P+ Y +L+A
Sbjct: 411 EPDEVCYLAVLSA 423
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/638 (37%), Positives = 371/638 (58%), Gaps = 63/638 (9%)
Query: 218 NALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHM-EAFETFNNMGLAGA 276
N +I+ ++S + A VF GM +++ITWNS++ G + M EA + F+ +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP---- 120
Query: 277 ELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDF-DHNIRTGLMVAYSKCGKMEDAS 335
TF I L + + + +Q + + F D ++ Y++ G+ME A
Sbjct: 121 --EPDTFSYNIMLSCYVRNVNFEK---AQSFFDRMPFKDAASWNTMITGYARRGEMEKAR 175
Query: 336 KIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV 395
++F M E K+ VSW AMISG+++ G ++ A +FF V
Sbjct: 176 ELFYSMME-KNEVSWNAMISGYIECGDLEKASHFF-----------------------KV 211
Query: 396 SPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAGY 454
+P + TA++ Y+K ++ A +F ++ K++V W+AM++GY
Sbjct: 212 APV------------RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY 259
Query: 455 AQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNA 514
+ E +K++R + EG++PN SS + C+ SA ++ G+Q H K+ L N
Sbjct: 260 VENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSA-LQLGRQIHQIVSKSTLCND 318
Query: 515 LCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR 574
+ ++L++MY K G + A ++F+ +K+D+V+WN+MI GYAQHG+ KAL +F+EM
Sbjct: 319 VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
+ D ITF+ V+ AC HAGLV+ G YF+ MV ++ + P +HY+CMVDL RAG LE
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
+A+ +I MPF A V+ T+L ACR L+ L ++A YV L+N+YA
Sbjct: 439 EALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYA 498
Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
+ W++ ARVRK M + V K GYSWIE++NK + F + D HP+ + I+ KL+EL
Sbjct: 499 SKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEK 558
Query: 741 RLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGD 800
++K AGYKP+ + L ++++E KE +L HSE+LA+AFG + P G+ +Q+ KNLR+CGD
Sbjct: 559 KMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGD 618
Query: 801 CHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
CH IK IS++E+R+I+VRDT RFHHFK+G CSCGDYW
Sbjct: 619 CHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 201/430 (46%), Gaps = 41/430 (9%)
Query: 119 LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPN 178
++ Y+R N E + FD M + SW ++++GYAR ++ ELF+ M ++ N
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKN 185
Query: 179 SFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFD 238
+++ ++ + G + A + G T A+I+ Y+K+K V A A+F
Sbjct: 186 EVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWT----AMITGYMKAKKVELAEAMFK 241
Query: 239 GME-DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELR 297
M +++ +TWN+M++GYV N + + F M G S S + C+ L+
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 298 LARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGH 357
L RQ+H V K+ + D T L+ Y KCG++ DA K+F +M++ KDVV+W AMISG+
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK-KDVVAWNAMISGY 360
Query: 358 LQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT 417
Q+G D A+ F +M +RP+ T+ +L A N+ ++G
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLA---------------CNHAGLVNIGM 405
Query: 418 ALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKP 477
A + V+ +++ + D ++ M+ + G E A+K+ R + +P
Sbjct: 406 AYFESMVRD---------YKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSMP---FRP 451
Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
+ F +++ AC + +F A + + L +Y+ K E + V
Sbjct: 452 HAAVFGTLLGACRVHKNV--ELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARV 509
Query: 538 FKRQRKRDLV 547
KR ++ ++V
Sbjct: 510 RKRMKESNVV 519
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 149/323 (46%), Gaps = 26/323 (8%)
Query: 29 KKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTC 88
+K QS FDR P ++ +N ++ Y R ++A LF + + + +S ++ C
Sbjct: 141 EKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIE-C 199
Query: 89 GCL--FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMN-ESNVV 145
G L H F K R V T+++ YM+ VE +F DM N+V
Sbjct: 200 GDLEKASHFF---------KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 146 SWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMV 205
+W +++SGY N + L+LF M EGI+PNS S+ L ++ + Q+H +V
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 206 IKNGGEVVTSVCN------ALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNE 259
K +++CN +LISMY K + DA +F+ M+ +D + WN+M++GY +
Sbjct: 311 SK------STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQ-LHSQVLKNGIDFDHNIR 318
+A F M TFV+V+ C + + S V ++ +
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 319 TGLMVAYSKCGKMEDASKIFSMM 341
T ++ + GK+E+A K+ M
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSM 447
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/729 (33%), Positives = 392/729 (53%), Gaps = 68/729 (9%)
Query: 125 RTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFST 184
R + + R+ FD + + SW S++SGY N + +LF M
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM-------------- 74
Query: 185 VLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRD 244
++ +V+ N L+S Y+K++M+ +AR VF+ M +R+
Sbjct: 75 -----SERNVVS--------------------WNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 245 SITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHS 304
++W +MV GY+ + EA F M E ++ + + AR+L+
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYD 165
Query: 305 QVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAID 364
+ + N+ GL + G++++A IF MRE ++VV+WT MI+G+ QN +D
Sbjct: 166 MMPVKDVVASTNMIGGL----CREGRVDEARLIFDEMRE-RNVVTWTTMITGYRQNNRVD 220
Query: 365 LAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYV 424
+A F M + +++ +L + + K A++ +
Sbjct: 221 VARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG 276
Query: 425 KKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
+ G + +A +VF+L++++D W M+ Y + G A+ ++ Q+ +GV+P+ + S
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
+++ C A A+++ G+Q HA ++ + ++ + V+S L+TMY K G + A VF R +
Sbjct: 337 ILSVC-ATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK 395
Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
D++ WNS+I GYA HG ++AL++F EM + +T I ++TAC++AG ++EG + F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 605 DIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR---- 660
+ M ++ + PT+EHYSC VD+ RAG ++KAM++I M ATVW +L AC+
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
Query: 661 ----------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIE 710
L +P ++ YVLLS++ A+ W + A VRK M V K G SWIE
Sbjct: 516 LDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575
Query: 711 VKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQ 769
V K + F G I +HP+ I LE+ L++AGY PD S+VL D+D+E K LS+
Sbjct: 576 VGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635
Query: 770 HSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKE 829
HSERLA+A+GL+ P G P++++KNLRVCGDCH IKLISK+ R+I++RD NRFHHF
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695
Query: 830 GLCSCGDYW 838
G CSC DYW
Sbjct: 696 GECSCRDYW 704
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 225/461 (48%), Gaps = 36/461 (7%)
Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
R+V LV Y++ + + R VF+ M E NVVSWT+++ GY + M LF RM
Sbjct: 77 RNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM 136
Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
+ N +++ + G L D+G + A +++ M+ +VV S +I + V
Sbjct: 137 P----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK--DVVAS--TNMIGGLCREGRV 188
Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
+AR +FD M +R+ +TW +M+ GY N A + F M E T ++ S++
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSMLLGY 244
Query: 291 ATTKELRLARQLHSQV-LKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVS 349
+ + A + + +K I + ++V + + G++ A ++F +M E +D +
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACN-----AMIVGFGEVGEISKARRVFDLM-EDRDNAT 298
Query: 350 WTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHII 405
W MI + + G A++ F QM ++GVRP+ + IL+ ++ QVHAH++
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 406 KTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVK 465
+ ++ V + L+ YVK G L +A VF+ KDI+ W+++++GYA G E A+K
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 466 IYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVS------S 519
I+ ++ S G PN+ T +++ AC+ GK I + + CV+ S
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYA------GKLEEGLEIFESMESKFCVTPTVEHYS 472
Query: 520 ALVTMYSKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQH 559
V M + G ++ A E+ + K D W +++ H
Sbjct: 473 CTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTH 513
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 153/351 (43%), Gaps = 43/351 (12%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRR-----LGLPLFGSTLSSVLKTC 88
+FD +RN V + ++ Y +++ A LF + L G TLS ++
Sbjct: 194 IFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDA 253
Query: 89 GCLFDHVFGRQV-HCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSW 147
F+ + + V C + GF + RRVFD M + + +W
Sbjct: 254 EEFFEVMPMKPVIACNAMIVGFGE--------------VGEISKARRVFDLMEDRDNATW 299
Query: 148 TSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIK 207
++ Y R L+LF +MQ +G++P+ + ++L V A + QVH +++
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFET 267
+ V + L++MY+K + A+ VFD +D I WNS+++GY ++ L EA +
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419
Query: 268 FNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVA--- 324
F+ M +G + T ++++ C+ ++ L+ G++ ++ + V
Sbjct: 420 FHEMPSSGTMPNKVTLIAILTACS-----------YAGKLEEGLEIFESMESKFCVTPTV 468
Query: 325 --YS-------KCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
YS + G+++ A ++ M D W A++ + +DLA
Sbjct: 469 EHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Query: 30 KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGL-PLFGSTLSSVLKTC 88
K + +FD R+ + ++ Y R EAL+LF +++ G+ P F S L S+L C
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPS-LISILSVC 341
Query: 89 GCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWT 148
L +GRQVH V+ F DV V++ L+ +Y++ + + VFD + +++ W
Sbjct: 342 ATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWN 401
Query: 149 SLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
S++SGYA + + + L++FH M G PN T +L + G + +++
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 258/815 (31%), Positives = 429/815 (52%), Gaps = 68/815 (8%)
Query: 83 SVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVED---GRRVFDDM 139
S LK C + D + + H K G DV+ T LV E + VF++
Sbjct: 37 SSLKNCKTI-DEL--KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS 93
Query: 140 NE-SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATA 198
+ SL+ GYA + + + + LF RM GI P+ +TF L A
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTN 258
+Q+H +++K G V N+L+ Y + + AR VFD M +R+ ++W SM+ GY
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 259 ELHMEAFETFNNMGLAGAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHN 316
+ +A + F M + E+T + T V VI CA ++L ++++ + +GI+ +
Sbjct: 214 DFAKDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 317 IRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE 376
+ + L+ Y KC ++ A ++F ++ AM S +++ G A+ F M
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 377 GVRPNGFTYSIILTAQPAVSPFQ-------VHAHIIKTNYEKSFSVGTALLN-------- 421
GVRP+ + +L+A + S + H ++++ +E ++ AL++
Sbjct: 332 GVRPDRIS---MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 422 -----------------------AYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIG 458
YV+ G +D A + FE + EK+IV+W+ +++G Q
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 459 DTEGAVKIYRQLTS-EGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCV 517
E A++++ + S EGV + T S+ +AC A++ K + K + + +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASAC-GHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 518 SSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDL 577
+ LV M+S+ G+ ESA +F RD+ +W + I A G+ ++A+E+F +M Q L
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 578 EFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAM 637
+ DG+ F+G +TAC+H GLV +G++ F M+ H + P HY CMVDL RAG+LE+A+
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 638 DIINRMPFAASATVWRTVLAACRLIS--------------LQPHDSAIYVLLSNMYAATG 683
+I MP + +W ++LAACR+ L P + YVLLSN+YA+ G
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 684 HWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLK 743
W + A+VR M ++ ++K G S I+++ KT+ F +GD SHP+ I + L+E+S R
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747
Query: 744 DAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHT 803
G+ PD S VL D+D++ K +LS+HSE+LA+A+GL+++ G ++IVKNLRVC DCH+
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807
Query: 804 VIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
K SK+ R+I++RD NRFH+ ++G CSCGD+W
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/559 (27%), Positives = 262/559 (46%), Gaps = 41/559 (7%)
Query: 46 YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
YN L+ Y L EA+ LFL + G+ T L C G Q+H V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 106 KSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLE 165
K G+A+D+ V SLV Y ++ R+VFD+M+E NVVSWTS++ GYAR ++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 166 LFHRM-QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMY 224
LF RM + E + PNS T V+ A + T +V+ + +G EV + +AL+ MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 225 LKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV 284
+K + A+ +FD + N+M + YV L EA FN M +G R + +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 285 SVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREM 344
S I C+ + + + H VL+NG + NI L+ Y KC + + A +IF M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN- 400
Query: 345 KDVVSWTAMISGHLQNGAIDL-------------------------------AVNFFCQM 373
K VV+W ++++G+++NG +D A+ FC M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 374 -TREGVRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYEKSFSVGTALLNAYVKKGI 428
++EGV +G T I +A + ++ +I K + +GT L++ + + G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 429 LDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINA 488
+ A +F + +D+ AW+A + A G+ E A++++ + +G+KP+ F + A
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 489 CTAPSAAVEQGKQFHACSIKAKLNNALCVS-SALVTMYSKKGNIESASEVFKRQ-RKRDL 546
C+ V+QGK+ +K + V +V + + G +E A ++ + + +
Sbjct: 581 CS-HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 547 VSWNSMICGYAQHGHTKKA 565
V WNS++ G+ + A
Sbjct: 640 VIWNSLLAACRVQGNVEMA 658
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 220/478 (46%), Gaps = 54/478 (11%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLG-IRRLGLPLFGSTLSSVLKTCGC 90
+ +FD +RN V + ++ Y R ++A++LF +R + T+ V+ C
Sbjct: 189 RKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAK 248
Query: 91 LFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
L D G +V+ SG + + ++LVD+YM+ N ++ +R+FD+ SN+ ++
Sbjct: 249 LEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAM 308
Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
S Y R + L +F+ M G++P+ + + + + + H V++NG
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
E ++CNALI MY+K A +FD M ++ +TWNS+VAGYV N A+ETF
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFET 428
Query: 271 M-------------GLAGAELTRS-------------------TFVSVIKLCATTKELRL 298
M GL L T +S+ C L L
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
A+ ++ + KNGI D + T L+ +S+CG E A IF+ + +DV +WTA I
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTAAIGAMA 547
Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSV--- 415
G + A+ F M +G++P+G + LTA H +++ E +S+
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS-------HGGLVQQGKEIFYSMLKL 600
Query: 416 -GTA--------LLNAYVKKGILDEAAKVFELID-EKDIVAWSAMLAGYAQIGDTEGA 463
G + +++ + G+L+EA ++ E + E + V W+++LA G+ E A
Sbjct: 601 HGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/729 (33%), Positives = 401/729 (55%), Gaps = 33/729 (4%)
Query: 46 YNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECV 105
+N ++ + R+ L +AL + + G+ ST ++K C L + G + V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL-KNFKGIDFLSDTV 164
Query: 106 KSGFARDVN--VSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRV 163
S D N V++SL+ Y+ ++ ++FD + + + V W +L+GYA+ D V
Sbjct: 165 SS-LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 164 LELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISM 223
++ F M+++ I PN+ TF VL V A + ++ VQ+H +V+ +G + S+ N+L+SM
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 224 YLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTF 283
Y K DA +F M D++TWN M++GYV + L E+ F M +G TF
Sbjct: 284 YSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITF 343
Query: 284 VSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMRE 343
S++ + + L +Q+H ++++ I D + + L+ AY KC + A IFS
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403
Query: 344 MKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----- 398
+ DVV +TAMISG+L NG ++ F + + + PN T IL P +
Sbjct: 404 V-DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL---PVIGILLALKL 459
Query: 399 --QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQ 456
++H IIK ++ ++G A+++ Y K G ++ A ++FE + ++DIV+W++M+ AQ
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 457 IGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-APSAAVEQGKQFHACSIKAKLNNAL 515
+ A+ I+RQ+ G+ + + S+ ++AC PS + GK H IK L + +
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF--GKAIHGFMIKHSLASDV 577
Query: 516 CVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM-RR 574
S L+ MY+K GN+++A VFK +++++VSWNS+I HG K +L +F EM +
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 575 QDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLE 634
+ D ITF+ +I++C H G VDEG ++F M ++ I P EHY+C+VDL+ RAG L
Sbjct: 638 SGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLT 697
Query: 635 KAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVLLSNMYA 680
+A + + MPF A VW T+L ACR L+ L P +S YVL+SN +A
Sbjct: 698 EAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHA 757
Query: 681 ATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELST 740
W+ +VR LM +R+V+K GYSWIE+ +T+ F++GD++HP+S+ IYS L L
Sbjct: 758 NAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLG 817
Query: 741 RLKDAGYKP 749
L+ GY P
Sbjct: 818 ELRLEGYIP 826
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/603 (27%), Positives = 308/603 (51%), Gaps = 33/603 (5%)
Query: 70 RRLGLPLFGSTLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNV 129
RRL L L + ++L+ G+QVH + + + D ++ +Y +
Sbjct: 36 RRLSLLLQACSNPNLLRQ---------GKQVHAFLIVNSISGDSYTDERILGMYAMCGSF 86
Query: 130 EDGRRVFD--DMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
D ++F D+ S++ W S++S + RN + ++ L + +M G+ P+ TF ++
Sbjct: 87 SDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVK 146
Query: 188 VLAD----EGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDR 243
+GI + V ++ G + V ++LI YL+ + +FD + +
Sbjct: 147 ACVALKNFKGIDFLSDTVSSL----GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK 202
Query: 244 DSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLH 303
D + WN M+ GY + F+ M + TF V+ +CA+ + L QLH
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
V+ +G+DF+ +I+ L+ YSKCG+ +DASK+F MM D V+W MISG++Q+G +
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR-ADTVTWNCMISGYVQSGLM 321
Query: 364 DLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-------QVHAHIIKTNYEKSFSVG 416
+ ++ FF +M GV P+ T+S +L P+VS F Q+H +I++ + +
Sbjct: 322 EESLTFFYEMISSGVLPDAITFSSLL---PSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 417 TALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVK 476
+AL++AY K + A +F + D+V ++AM++GY G +++++R L +
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 477 PNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASE 536
PNE T S++ A++ G++ H IK +N + A++ MY+K G + A E
Sbjct: 439 PNEITLVSILPV-IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 537 VFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGL 596
+F+R KRD+VSWNSMI AQ + A+++F++M + +D ++ ++AC +
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 597 VDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVL 656
G+ M+ +H + + S ++D+Y++ G L+ AM++ M + W +++
Sbjct: 558 ESFGKAIHGFMI-KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSII 615
Query: 657 AAC 659
AAC
Sbjct: 616 AAC 618
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 181/359 (50%), Gaps = 2/359 (0%)
Query: 34 LFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCLFD 93
LF + + V +N ++ Y + L +E+L F + G+ T SS+L + +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 94 HVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSG 153
+ +Q+HC ++ + D+ ++++L+D Y + V + +F N +VV +T+++SG
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 154 YARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVV 213
Y N + LE+F + I PN T ++L V+ + ++H +IK G +
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
++ A+I MY K + A +F+ + RD ++WNSM+ ++ A + F MG+
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
+G + + + CA + +H ++K+ + D + L+ Y+KCG ++
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKA 595
Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMT-REGVRPNGFTYSIILTA 391
A +F M+E K++VSW ++I+ +G + ++ F +M + G+RP+ T+ I+++
Sbjct: 596 AMNVFKTMKE-KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 154/337 (45%), Gaps = 2/337 (0%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
Q++F + + V + ++ Y + L+ ++L +F + ++ + TL S+L G L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
GR++H +K GF N+ +++D+Y + + +F+ +++ ++VSW S++
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
+ A++ +++F +M V GI + + S L A+ + +H +IK+
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLA 574
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
+ LI MY K ++ A VF M++++ ++WNS++A + ++ F+ M
Sbjct: 575 SDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634
Query: 272 -GLAGAELTRSTFVSVIKLCATTKEL-RLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
+G + TF+ +I C ++ R S GI ++ + + G
Sbjct: 635 VEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAG 694
Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
++ +A + M D W ++ + ++LA
Sbjct: 695 RLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELA 731
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/763 (30%), Positives = 414/763 (54%), Gaps = 43/763 (5%)
Query: 30 KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
K S F+ P R+ V +N +L Y ++ +++ +F+ + R G+ G T + +LK C
Sbjct: 132 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 191
Query: 90 CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
L D G Q+H V+ G DV +++L+D+Y + + RVF + E N VSW++
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSA 251
Query: 150 LLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNG 209
+++G +N + L+ F MQ + +++VL A + Q+H +K+
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
V A + MY K ++DA+ +FD E+ + ++N+M+ GY E +A F+
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
+ +G + V + CA K L Q++ +K+ + D + + Y KC
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ 431
Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
+ +A ++F MR +D VSW A+I+ H QNG + F M R + P+ FT+ IL
Sbjct: 432 ALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 390 TAQPAVS---PFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV----------- 435
A S ++H+ I+K+ + SVG +L++ Y K G+++EA K+
Sbjct: 491 KACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 436 -----FELIDEKDI----VAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
E + K + V+W+++++GY +E A ++ ++ G+ P++FT+++V+
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
+ C A A+ GKQ HA IK +L + + + S LV MYSK G++ + +F++ +RD
Sbjct: 611 DTC-ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669
Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDI 606
V+WN+MICGYA HG ++A+++F+ M ++++ + +TFI ++ AC H GL+D+G +YF +
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 729
Query: 607 MVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR------ 660
M ++ + P + HYS MVD+ ++G +++A+++I MPF A +WRT+L C
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 789
Query: 661 ---------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
L+ L P DS+ Y LLSN+YA G W++ + +R+ M K+KKE G SW+E+
Sbjct: 790 EVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 849
Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYV 754
K++ + FL GD +HP+ +IY +L + + +K D+S+V
Sbjct: 850 KDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF---DDSSFV 889
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 280/558 (50%), Gaps = 35/558 (6%)
Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
RDV +++ Y ++N++ F+ M +VVSW S+LSGY +N + + +E+F M
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
EGI+ + TF+ +L V + + +Q+H +V++ G + +AL+ MY K K
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
++ VF G+ +++S++W++++AG V N L A + F M A +++S + SV++ C
Sbjct: 232 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
A ELRL QLH+ LK+ D +RT + Y+KC M+DA +F + + S+
Sbjct: 292 AALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL-NRQSY 350
Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAV----SPFQVHAHIIK 406
AMI+G+ Q A+ F ++ G+ + + S + A V Q++ IK
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
++ V A ++ Y K L EA +VF+ + +D V+W+A++A + Q G + +
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYS 526
+ + ++P+EFTF S++ ACT S G + H+ +K+ + + V +L+ MYS
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTGGSLGY--GMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 527 KKGNIESASEVFKR-------------------QRKRDL-VSWNSMICGYAQHGHTKKAL 566
K G IE A ++ R +R +++ VSWNS+I GY ++ A
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
+F M + D T+ V+ C + G+Q V + + + S +VD+
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ-IHAQVIKKELQSDVYICSTLVDM 647
Query: 627 YSRAG-------MLEKAM 637
YS+ G M EK++
Sbjct: 648 YSKCGDLHDSRLMFEKSL 665
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 253/508 (49%), Gaps = 43/508 (8%)
Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
QV + +F+F V A +G + Q H +I +G T V N L+ +Y S+
Sbjct: 42 QVNSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99
Query: 231 RDARAVFDGMEDRDSITWNSMV-------------------------------AGYVTNE 259
A VFD M RD ++WN M+ +GY+ N
Sbjct: 100 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG 159
Query: 260 LHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRT 319
+++ E F +MG G E TF ++K+C+ ++ L Q+H V++ G D D +
Sbjct: 160 ESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAAS 219
Query: 320 GLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVR 379
L+ Y+K + ++ ++F + E K+ VSW+A+I+G +QN + LA+ FF +M +
Sbjct: 220 ALLDMYAKGKRFVESLRVFQGIPE-KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 278
Query: 380 PNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKV 435
+ Y+ +L + A+S Q+HAH +K+++ V TA L+ Y K + +A +
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 436 FELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAA 495
F+ + + +++AM+ GY+Q A+ ++ +L S G+ +E + S V AC A
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC-ALVKG 397
Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICG 555
+ +G Q + +IK+ L+ +CV++A + MY K + A VF R+RD VSWN++I
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 556 YAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYP 615
+ Q+G + L +F M R +E D TF ++ ACT G + G + +V
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSG--MA 514
Query: 616 TMEHYSC-MVDLYSRAGMLEKAMDIINR 642
+ C ++D+YS+ GM+E+A I +R
Sbjct: 515 SNSSVGCSLIDMYSKCGMIEEAEKIHSR 542
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/672 (34%), Positives = 382/672 (56%), Gaps = 63/672 (9%)
Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
S N++++ Y + M RDAR +FD M DR+ I+WN +V+GY+ N EA + F+ M
Sbjct: 49 SSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLM--- 105
Query: 275 GAELTRSTFVSVIKLCATTKELRLARQLHSQVL-KNGIDFDHNIRTGLMVAYSKCGKMED 333
E ++ +++K ++ +A L ++ KN + + T +++ + + G+++D
Sbjct: 106 -PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW-----TVMLIGFLQDGRIDD 159
Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
A K++ M+ + KD ++ T+MI G + G +D A F +M+ V T++ ++T
Sbjct: 160 ACKLYEMIPD-KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYG 214
Query: 394 AVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAG 453
+ I EK+ T++L YV+ G +++A ++FE++ K ++A +AM++G
Sbjct: 215 QNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISG 274
Query: 454 YAQIGDTEGAVKIYRQLTS-------------------------------EGVKPNEFTF 482
Q G+ A +++ + +GV+P T
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTL 334
Query: 483 SSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQR 542
S+++ C A A++ GKQ HA ++ + + + V+S L+TMY K G + + +F R
Sbjct: 335 ISILSVC-ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP 393
Query: 543 KRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQ 601
+D++ WNS+I GYA HG ++AL+VF EM + + +TF+ ++AC++AG+V+EG
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL 453
Query: 602 QYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACR- 660
+ ++ M + + P HY+CMVD+ RAG +AM++I+ M A VW ++L ACR
Sbjct: 454 KIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
Query: 661 -------------LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYS 707
LI ++P +S Y+LLSNMYA+ G W + A +RKLM R V+K G S
Sbjct: 514 HSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
Query: 708 WIEVKNKTYSFLAGDI-SHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAI 766
W EV+NK ++F G I SHP+ I L+EL L++AGY PD SY L D+D+E K
Sbjct: 574 WTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNS 633
Query: 767 LSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHH 826
L HSERLA+A+ L+ G P++++KNLRVC DCHT IK+ISK++ R+I++RD NRFHH
Sbjct: 634 LKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHH 693
Query: 827 FKEGLCSCGDYW 838
F+ G CSC DYW
Sbjct: 694 FRNGECSCKDYW 705
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 223/474 (47%), Gaps = 30/474 (6%)
Query: 111 RDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRM 170
R++ LV YM+ +++ R+VFD M E NVVSWT+L+ GY N D LF +M
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 171 QVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMV 230
+ N +++ +L +G + A +++ M+ TS+ + L K V
Sbjct: 137 P----EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGL----CKEGRV 188
Query: 231 RDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLC 290
+AR +FD M +R ITW +MV GY N +A + F+ M E T ++ S++
Sbjct: 189 DEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGY 244
Query: 291 ATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSW 350
+ A +L + + + + +GL + G++ A ++F M+E D SW
Sbjct: 245 VQNGRIEDAEELFEVMPVKPVIACNAMISGL----GQKGEIAKARRVFDSMKERND-ASW 299
Query: 351 TAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIK 406
+I H +NG A++ F M ++GVRP T IL+ +++ QVHA +++
Sbjct: 300 QTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR 359
Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
++ V + L+ Y+K G L ++ +F+ KDI+ W+++++GYA G E A+K+
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKV 419
Query: 467 YRQLTSEG-VKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMY 525
+ ++ G KPNE TF + ++AC+ E K + + + + +V M
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 526 SKKGNIESASEVFKRQR-KRDLVSWNSMICGYAQHGH-------TKKALEVFKE 571
+ G A E+ + D W S++ H KK +E+ E
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE 533
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 213/465 (45%), Gaps = 59/465 (12%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +FD P+RN V + L+ Y + A +LF + + +S + G L
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE------KNKVSWTVMLIGFL 152
Query: 92 FDHVFGR-QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
D GR C+ + +D TS++ + V++ R +FD+M+E +V++WT++
Sbjct: 153 QD---GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM 209
Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV-HTMVIKNG 209
++GY +N D ++F M + +++++L G + A ++ M +K
Sbjct: 210 VTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP- 264
Query: 210 GEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFN 269
CNA+IS + + AR VFD M++R+ +W +++ + N +EA + F
Sbjct: 265 ----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI 320
Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
M G T T +S++ +CA+ L +Q+H+Q+++ D D + + LM Y KCG
Sbjct: 321 LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCG 380
Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSII 388
++ + IF KD++ W ++ISG+ +G + A+ FC+M G +PN T+
Sbjct: 381 ELVKSKLIFDRFPS-KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF--- 436
Query: 389 LTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWS 448
A L+A G+++E K++E ++ +
Sbjct: 437 ----------------------------VATLSACSYAGMVEEGLKIYESME--SVFGVK 466
Query: 449 AMLAGYAQIGDTEGAVKIYRQ----LTSEGVKPNEFTFSSVINAC 489
+ A YA + D G + + + S V+P+ + S++ AC
Sbjct: 467 PITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 202/434 (46%), Gaps = 65/434 (14%)
Query: 230 VRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKL 289
+ +AR +FD + + +WNSMVAGY N + +A + F+ M
Sbjct: 33 IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP----------------- 75
Query: 290 CATTKELRLARQLHSQVLKNGIDFDHNIRT--GLMVAYSKCGKMEDASKIFSMMREMKDV 347
D NI + GL+ Y K G++++A K+F +M E ++V
Sbjct: 76 ------------------------DRNIISWNGLVSGYMKNGEIDEARKVFDLMPE-RNV 110
Query: 348 VSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKT 407
VSWTA++ G++ NG +D+A + F +M + N +++++L + +
Sbjct: 111 VSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEM 166
Query: 408 NYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIY 467
+K T++++ K+G +DEA ++F+ + E+ ++ W+ M+ GY Q + A KI+
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226
Query: 468 RQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSK 527
+ + E +++S++ + + F +K + +A+++ +
Sbjct: 227 DVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVK-----PVIACNAMISGLGQ 277
Query: 528 KGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGV 587
KG I A VF ++R+ SW ++I + ++G +AL++F M++Q + T I +
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Query: 588 ITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMP 644
++ C + G+Q +V + +Y S ++ +Y + G L K+ I +R P
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVA----SVLMTMYIKCGELVKSKLIFDRFP 393
Query: 645 FAASATVWRTVLAA 658
+ +W ++++
Sbjct: 394 -SKDIIMWNSIISG 406
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 126/266 (47%), Gaps = 11/266 (4%)
Query: 129 VEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV 188
+ RRVFD M E N SW +++ + RN L+LF MQ +G++P T ++L V
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 189 LADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITW 248
A + QVH +++ +V V + L++MY+K + ++ +FD +D I W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 249 NSMVAGYVTNELHMEAFETFNNMGLAGA-ELTRSTFVSVIKLCA----TTKELRLARQLH 303
NS+++GY ++ L EA + F M L+G+ + TFV+ + C+ + L++ +
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 304 SQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAI 363
S I + ++ + G+ +A ++ M D W +++ + +
Sbjct: 461 SVFGVKPITAHYACMVDML---GRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQL 517
Query: 364 DLAVNFFCQMTREGVRP-NGFTYSII 388
D+A FC + P N TY ++
Sbjct: 518 DVAE--FCAKKLIEIEPENSGTYILL 541
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 119/232 (51%), Gaps = 3/232 (1%)
Query: 30 KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG 89
K + +FD +RN + ++ + R+ EAL+LF+ +++ G+ TL S+L C
Sbjct: 283 KARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342
Query: 90 CLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTS 149
L G+QVH + V+ F DV V++ L+ +Y++ + + +FD +++ W S
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402
Query: 150 LLSGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVH-TMVIK 207
++SGYA + + + L++F M + G KPN TF L + G+V ++++ +M
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462
Query: 208 NGGEVVTSVCNALISMYLKSKMVRDARAVFDGME-DRDSITWNSMVAGYVTN 258
G + +T+ ++ M ++ +A + D M + D+ W S++ T+
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 30 KDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGST----LSSVL 85
K + +FDR P ++ + +N ++ Y L +EAL +F +PL GST ++ V
Sbjct: 384 KSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCE-----MPLSGSTKPNEVTFVA 438
Query: 86 KTCGCLFDHVF--GRQVHCECVKSGFARDVNVS--TSLVDLYMRTNNVEDGRRVFDDMN- 140
C + + G +++ E ++S F + +VD+ R + + D M
Sbjct: 439 TLSACSYAGMVEEGLKIY-ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Query: 141 ESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
E + W SLL G R V E + +E NS T+ + + A +G A +
Sbjct: 498 EPDAAVWGSLL-GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 556
Query: 201 VHTMV 205
+ ++
Sbjct: 557 LRKLM 561
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/584 (38%), Positives = 338/584 (57%), Gaps = 26/584 (4%)
Query: 279 TRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIF 338
++ T+ +I C L A ++H +L NG D D + T L+ YS G ++ A K+F
Sbjct: 76 SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVF 135
Query: 339 SMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPA---- 394
R+ + + W A+ G + + + +M R GV + FTY+ +L A A
Sbjct: 136 DKTRK-RTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 395 ----VSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAM 450
+ ++HAH+ + Y + T L++ Y + G +D A+ VF + +++V+WSAM
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 451 LAGYAQIGDTEGAVKIYRQLTSE--GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIK 508
+A YA+ G A++ +R++ E PN T SV+ AC A AA+EQGK H ++
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQAC-ASLAALEQGKLIHGYILR 313
Query: 509 AKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEV 568
L++ L V SALVTMY + G +E VF R RD+VSWNS+I Y HG+ KKA+++
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 569 FKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYS 628
F+EM +TF+ V+ AC+H GLV+EG++ F+ M +H I P +EHY+CMVDL
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACR--------------LISLQPHDSAIYVL 674
RA L++A ++ M VW ++L +CR L +L+P ++ YVL
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVL 493
Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
L+++YA W E RV+KL+ R ++K G W+EV+ K YSF++ D +P QI++
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAF 553
Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
L +L+ +K+ GY P T VL +++ E KE I+ HSE+LA+AFGL+ T G P++I KN
Sbjct: 554 LVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKN 613
Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
LR+C DCH K ISK ++I+VRD NRFH FK G+CSCGDYW
Sbjct: 614 LRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 192/405 (47%), Gaps = 22/405 (5%)
Query: 177 PNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAV 236
P+ T+ ++ ++ A++VH ++ NG + + LI MY V AR V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 237 FDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCA----T 292
FD R WN++ E + M G E R T+ V+K C T
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 293 TKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTA 352
L +++H+ + + G I T L+ Y++ G ++ AS +F M +++VVSW+A
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM-PVRNVVSWSA 253
Query: 353 MISGHLQNGAIDLAVNFFCQMTRE--GVRPNGFTYSIILTAQPAVSPFQ----VHAHIIK 406
MI+ + +NG A+ F +M RE PN T +L A +++ + +H +I++
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 407 TNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKI 466
+ V +AL+ Y + G L+ +VF+ + ++D+V+W+++++ Y G + A++I
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 467 YRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHAC-----SIKAKLNNALCVSSAL 521
+ ++ + G P TF SV+ AC+ VE+GK+ IK ++ + C +
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSH-EGLVEEGKRLFETMWRDHGIKPQIEHYAC----M 428
Query: 522 VTMYSKKGNIESASEVFKRQRKRDLVS-WNSMICGYAQHGHTKKA 565
V + + ++ A+++ + R W S++ HG+ + A
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 172/352 (48%), Gaps = 20/352 (5%)
Query: 27 YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLK 86
Y++K +FD++ +R +N L +E L L+ + R+G+ T + VLK
Sbjct: 130 YARK---VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLK 186
Query: 87 TC---GCLFDHVF-GRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNES 142
C C +H+ G+++H + G++ V + T+LVD+Y R V+ VF M
Sbjct: 187 ACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVR 246
Query: 143 NVVSWTSLLSGYARNKMNDRVLELFHRM--QVEGIKPNSFTFSTVLGVLADEGIVATAVQ 200
NVVSW+++++ YA+N L F M + + PNS T +VL A +
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKL 306
Query: 201 VHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNEL 260
+H +++ G + + V +AL++MY + + + VFD M DRD ++WNS+++ Y +
Sbjct: 307 IHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 261 HMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTG 320
+A + F M GA T TFVSV+ C+ + ++L + + DH I+
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR-----DHGIKPQ 421
Query: 321 L-----MV-AYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLA 366
+ MV + ++++A+K+ MR W +++ +G ++LA
Sbjct: 422 IEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 180/388 (46%), Gaps = 21/388 (5%)
Query: 99 QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNK 158
+VH + +G +D ++T L+ +Y +V+ R+VFD + + W +L
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 159 MNDRVLELFHRMQVEGIKPNSFTFSTVL-GVLADEGIV---ATAVQVHTMVIKNGGEVVT 214
+ VL L+ +M G++ + FT++ VL +A E V ++H + + G
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 215 SVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGLA 274
+ L+ MY + V A VF GM R+ ++W++M+A Y N EA TF M
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 275 GAELTRS--TFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKME 332
+ + + T VSV++ CA+ L + +H +L+ G+D + + L+ Y +CGK+E
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 333 DASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTA- 391
++F M + +DVVSW ++IS + +G A+ F +M G P T+ +L A
Sbjct: 338 VGQRVFDRMHD-RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 392 ------QPAVSPFQV--HAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK-VFELIDEK 442
+ F+ H IK E +++ + LDEAAK V ++ E
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHY----ACMVDLLGRANRLDEAAKMVQDMRTEP 452
Query: 443 DIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
W ++L G+ E A + R+L
Sbjct: 453 GPKVWGSLLGSCRIHGNVELAERASRRL 480
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/743 (33%), Positives = 409/743 (55%), Gaps = 34/743 (4%)
Query: 27 YSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGS-TLSSVL 85
Y++K +F++ P+RN V ++ ++ +++E+L +FL R LSS +
Sbjct: 97 YARK---VFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 86 KTCGCLFDHVFGR----QVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNE 141
+ C L GR Q+ VKSGF RDV V T L+D Y++ N++ R VFD + E
Sbjct: 154 QACSGLDGR--GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211
Query: 142 SNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQV 201
+ V+WT+++SG + + L+LF+++ + + P+ + STVL + + Q+
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQI 271
Query: 202 HTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELH 261
H +++ G E+ S+ N LI Y+K V A +F+GM +++ I+W ++++GY N LH
Sbjct: 272 HAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALH 331
Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
EA E F +M G + S++ CA+ L Q+H+ +K + D + L
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSL 391
Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGA---IDLAVNFFCQMTREGV 378
+ Y+KC + DA K+F + DVV + AMI G+ + G + A+N F M +
Sbjct: 392 IDMYAKCDCLTDARKVFDIF-AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 379 RPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAK 434
RP+ T+ +L A +++ Q+H + K G+AL++ Y L ++
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510
Query: 435 VFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSA 494
VF+ + KD+V W++M AGY Q + E A+ ++ +L +P+EFTF++++ A A
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA-AGNLA 569
Query: 495 AVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMIC 554
+V+ G++FH +K L +++AL+ MY+K G+ E A + F RD+V WNS+I
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 555 GYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIY 614
YA HG KKAL++ ++M + +E + ITF+GV++AC+HAGLV++G + F++M+ I
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIE 688
Query: 615 PTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC--------------R 660
P EHY CMV L RAG L KA ++I +MP +A VWR++L+ C
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 661 LISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLA 720
I P DS + +LSN+YA+ G W E +VR+ M V KE G SWI + + + FL+
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLS 808
Query: 721 GDISHPQSNQIYSKLEELSTRLK 743
D SH ++NQIY L++L +++
Sbjct: 809 KDKSHCKANQIYEVLDDLLVQIR 831
Score = 240 bits (612), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/581 (28%), Positives = 300/581 (51%), Gaps = 38/581 (6%)
Query: 100 VHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKM 159
VH + + G D +S L++LY R + R+VF+ M E N+VSW++++S + +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 160 NDRVLELFHRM-QVEGIKPNSFTFSTVLGVLA--DEGIVATAVQVHTMVIKNGGEVVTSV 216
+ L +F + PN + S+ + + D Q+ + ++K+G + V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 217 CNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAG-------YVTNELHMEAFETFN 269
LI YLK + AR VFD + ++ ++TW +M++G YV+ +L + E +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME--D 243
Query: 270 NMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCG 329
N+ G L+ +V+ C+ L +Q+H+ +L+ G++ D ++ L+ +Y KCG
Sbjct: 244 NVVPDGYILS-----TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 330 KMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIIL 389
++ A K+F+ M K+++SWT ++SG+ QN A+ F M++ G++P+ + S IL
Sbjct: 299 RVIAAHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 390 TAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIV 445
T+ ++ QVHA+ IK N V +L++ Y K L +A KVF++ D+V
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 446 AWSAMLAGYAQIG---DTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQF 502
++AM+ GY+++G + A+ I+R + ++P+ TF S++ A +A ++ KQ
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA-SASLTSLGLSKQI 476
Query: 503 HACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHT 562
H K LN + SAL+ +YS ++ + VF + +DLV WNSM GY Q
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSEN 536
Query: 563 KKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVN---EHHIYPTMEH 619
++AL +F E++ D TF ++TA + V GQ++ ++ E + Y T
Sbjct: 537 EEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT--- 593
Query: 620 YSCMVDLYSRAGMLEKAMDIINRMPFAASATV--WRTVLAA 658
+ ++D+Y++ G E A + AAS V W +V+++
Sbjct: 594 -NALLDMYAKCGSPEDAHKAFDS---AASRDVVCWNSVISS 630
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 260/488 (53%), Gaps = 16/488 (3%)
Query: 182 FSTVLGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGME 241
F+ +L + A + ++ VH +I G E+ T + N LI++Y ++ + AR VF+ M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 242 DRDSITWNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFV-SVIKLCATT--KELRL 298
+R+ ++W++MV+ + ++ E+ F + + S I+ C+ + +
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 299 ARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHL 358
QL S ++K+G D D + T L+ Y K G ++ A +F + E K V+WT MISG +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE-KSTVTWTTMISGCV 225
Query: 359 QNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQPAVSPF-----QVHAHIIKTNYEKSF 413
+ G +++ F Q+ + V P+G+ S +L+A ++ PF Q+HAHI++ E
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA-CSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 414 SVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSE 473
S+ L+++YVK G + A K+F + K+I++W+ +L+GY Q + A++++ ++
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 474 GVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIES 533
G+KP+ + SS++ +C A A+ G Q HA +IKA L N V+++L+ MY+K +
Sbjct: 345 GLKPDMYACSSILTSC-ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 534 ASEVFKRQRKRDLVSWNSMICGYAQHG---HTKKALEVFKEMRRQDLEFDGITFIGVITA 590
A +VF D+V +N+MI GY++ G +AL +F++MR + + +TF+ ++ A
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 591 CTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASAT 650
+ +Q +M ++ + + S ++D+YS L+ + + + M
Sbjct: 464 SASLTSLGLSKQIHGLMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK-VKDLV 521
Query: 651 VWRTVLAA 658
+W ++ A
Sbjct: 522 IWNSMFAG 529
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 197/383 (51%), Gaps = 20/383 (5%)
Query: 280 RSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFS 339
R F +++L A+ L +H Q++ G++ D + L+ YS+ G M A K+F
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103
Query: 340 MMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTR-EGVRPNGFTYSIILTAQPAVSP- 397
M E +++VSW+ M+S +G + ++ F + R PN + S + A +
Sbjct: 104 KMPE-RNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR 162
Query: 398 -----FQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLA 452
FQ+ + ++K+ +++ VGT L++ Y+K G +D A VF+ + EK V W+ M++
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 453 GYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLN 512
G ++G + +++++ QL + V P+ + S+V++AC+ +E GKQ HA ++ L
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL-PFLEGGKQIHAHILRYGLE 281
Query: 513 NALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEM 572
+ + L+ Y K G + +A ++F ++++SW +++ GY Q+ K+A+E+F M
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 573 RRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYS----CMVDLYS 628
+ L+ D ++T+C + G Q V+ + I + + S ++D+Y+
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQ-----VHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 629 RAGMLEKAMDIINRMPFAASATV 651
+ L A + + FAA+ V
Sbjct: 397 KCDCLTDARKVFD--IFAAADVV 417
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 517 VSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-- 574
+S+ L+ +YS+ G + A +VF++ +R+LVSW++M+ HG +++L VF E R
Sbjct: 81 LSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTR 140
Query: 575 --QDLEFDGITFIGVITACTHAG--LVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRA 630
E+ +FI + G +V + Q + + +Y + ++D Y +
Sbjct: 141 KDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG----TLLIDFYLKD 196
Query: 631 GMLEKAMDIINRMPFAASATVWRTVLAAC 659
G ++ A + + +P ++ T W T+++ C
Sbjct: 197 GNIDYARLVFDALPEKSTVT-WTTMISGC 224
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/644 (36%), Positives = 364/644 (56%), Gaps = 31/644 (4%)
Query: 214 TSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNMGL 273
S+ +I+ Y +S + DA +FD M RD ++WNSM++G V A + F+ M
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM-- 123
Query: 274 AGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMED 333
E + ++ +++ C + ++ A +L Q+ D ++ Y + GK++D
Sbjct: 124 --PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK----DTAAWNSMVHGYLQFGKVDD 177
Query: 334 ASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPNGFTYSIILTAQP 393
A K+F M K+V+SWT MI G QN A++ F M R ++ ++ ++TA
Sbjct: 178 ALKLFKQM-PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 394 AVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
F QVH IIK + V +L+ Y + ++ KVF+ + + W+A
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTA 296
Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKA 509
+L+GY+ E A+ I+ + + PN+ TF+S +N+C+A ++ GK+ H ++K
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSAL-GTLDWGKEMHGVAVKL 355
Query: 510 KLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVF 569
L V ++LV MYS GN+ A VF + K+ +VSWNS+I G AQHG K A +F
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 570 KEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNE-HHIYPTMEHYSCMVDLYS 628
+M R + E D ITF G+++AC+H G +++G++ F M + +HI ++HY+CMVD+
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 629 RAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQPHDSAIYVL 674
R G L++A ++I RM + VW +L+ACR+ +L SA YVL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 675 LSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSK 734
LSN+YA+ G W +++R M + K+ G SW+ ++ K + F +GD P ++IY K
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEK 593
Query: 735 LEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKN 794
LE L +LK+ GY PD L D++DE KE +L HSERLAIAFGL+ T G+ + ++KN
Sbjct: 594 LEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKN 653
Query: 795 LRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
LRVC DCHTVIKLIS + R+IV+RD RFHHFK G CSCGDYW
Sbjct: 654 LRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 225/479 (46%), Gaps = 48/479 (10%)
Query: 100 VHCECVKSGFARDVNVSTS--LVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLLSGYARN 157
+H +C +S F+ V L+ ++ + +++ R VF+ + +V +T +++GY R+
Sbjct: 21 IHGKCYRS-FSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRS 79
Query: 158 KMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQ----------VHTMVIK 207
L LF M V + ++++++ + G + TAV+ V +
Sbjct: 80 NRLVDALNLFDEMPVRDV----VSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMV 135
Query: 208 NG----GEV-------------VTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNS 250
NG G+V T+ N+++ YL+ V DA +F M ++ I+W +
Sbjct: 136 NGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTT 195
Query: 251 MVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNG 310
M+ G NE EA + F NM + T F VI CA + Q+H ++K G
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG 255
Query: 311 IDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFF 370
++ + L+ Y+ C ++ D+ K+F + + V WTA++SG+ N + A++ F
Sbjct: 256 FLYEEYVSASLITFYANCKRIGDSRKVFD-EKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
M R + PN T++ L + A+ ++H +K E VG +L+ Y
Sbjct: 315 SGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDS 374
Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
G +++A VF I +K IV+W++++ G AQ G + A I+ Q+ +P+E TF+ ++
Sbjct: 375 GNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLL 434
Query: 487 NACTAPSAAVEQGKQFHACS-----IKAKLNNALCVSSALVTMYSKKGNIESASEVFKR 540
+AC+ + K F+ S I K+ + C +V + + G ++ A E+ +R
Sbjct: 435 SACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC----MVDILGRCGKLKEAEELIER 489
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/548 (24%), Positives = 244/548 (44%), Gaps = 72/548 (13%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCG-- 89
+ +F++ P + Y +++ Y R + +ALNLF + + + S +S ++ CG
Sbjct: 55 REVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE-CGDM 113
Query: 90 ----CLFDHVFGRQVHC------ECVKSGFA------------RDVNVSTSLVDLYMRTN 127
LFD + R V C +SG +D S+V Y++
Sbjct: 114 NTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFG 173
Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
V+D ++F M NV+SWT+++ G +N+ + L+LF M IK S F+ V+
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
A+ +QVH ++IK G V +LI+ Y K + D+R VFD
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV 293
Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
W ++++GY N+ H +A F+ M +STF S + C+ L +++H +
Sbjct: 294 WTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV 353
Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
K G++ D + L+V YS G + DA +F + + K +VSW ++I G Q+G A
Sbjct: 354 KLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK-KSIVSWNSIIVGCAQHGRGKWAF 412
Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKG 427
F QM R P+ T+ T LL+A G
Sbjct: 413 VIFGQMIRLNKEPDEITF-------------------------------TGLLSACSHCG 441
Query: 428 ILDEAAKVFELID------EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFT 481
L++ K+F + ++ I ++ M+ + G + A ++ ++ VKPNE
Sbjct: 442 FLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMV 498
Query: 482 FSSVINACTAPSAAVEQGKQFHAC--SIKAKLNNALCVSSALVTMYSKKGNIESASEVFK 539
+ ++++AC S V++G++ A ++ +K + A + L +Y+ G + S++
Sbjct: 499 WLALLSACRMHS-DVDRGEKAAAAIFNLDSKSSAAYVL---LSNIYASAGRWSNVSKLRV 554
Query: 540 RQRKRDLV 547
+ +K ++
Sbjct: 555 KMKKNGIM 562
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 46/250 (18%)
Query: 402 AHIIKTNYEKSFSVGTALLNA------YVKKGILDEAAKVF------------------- 436
+H+I +SFSV N ++ +DEA +VF
Sbjct: 18 SHVIHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYT 77
Query: 437 ---------ELIDE---KDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSS 484
L DE +D+V+W++M++G + GD AVK++ ++ V ++++
Sbjct: 78 RSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTA 133
Query: 485 VINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKR 544
++N C + + F+ +K +++V Y + G ++ A ++FK+ +
Sbjct: 134 MVNGCFRSGKVDQAERLFYQMPVKDT-----AAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 545 DLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYF 604
+++SW +MICG Q+ + +AL++FK M R ++ F VITAC +A G Q
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVH 248
Query: 605 DIMVNEHHIY 614
+++ +Y
Sbjct: 249 GLIIKLGFLY 258
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 496 VEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRK------------ 543
V GK + + S+ + N L+ + I+ A EVF +
Sbjct: 20 VIHGKCYRSFSVTVEFQN----REVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITG 75
Query: 544 -------------------RDLVSWNSMICGYAQHGHTKKALEVFKEMRRQDLEFDGITF 584
RD+VSWNSMI G + G A+++F EM + + +++
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSW 131
Query: 585 IGVITACTHAGLVDEGQQYFDIMVNEHHIYPTME--HYSCMVDLYSRAGMLEKAMDIINR 642
++ C +G VD+ ++ F M P + ++ MV Y + G ++ A+ + +
Sbjct: 132 TAMVNGCFRSGKVDQAERLFYQM-------PVKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 643 MPFAASATVWRTVLAA 658
MP + W T++
Sbjct: 185 MP-GKNVISWTTMICG 199
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 258/753 (34%), Positives = 414/753 (54%), Gaps = 45/753 (5%)
Query: 26 FYS--KKDQSLFDRSPQRN-FVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLS 82
FYS + LFD S QRN N + E R + AL++F L L FG +
Sbjct: 20 FYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFK--ENLQLGYFGRHMD 77
Query: 83 SV---LKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDM 139
V L C D G Q+H SGF V VS +++ +Y + ++ +F+++
Sbjct: 78 EVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENL 137
Query: 140 NESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGV-LADEGIVATA 198
+ +VVSW ++LSG+ N++ L RM+ G+ ++FT+ST L + EG +
Sbjct: 138 VDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL-LG 193
Query: 199 VQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVT- 257
+Q+ + V+K G E V N+ I+MY +S R AR VFD M +D I+WNS+++G
Sbjct: 194 LQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQE 253
Query: 258 NELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNI 317
EA F +M G EL +F SVI C +L+LARQ+H +K G + +
Sbjct: 254 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV 313
Query: 318 RTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREG 377
LM YSKCG +E +F M E ++VVSWT MIS + D AV+ F M +G
Sbjct: 314 GNILMSRYSKCGVLEAVKSVFHQMSE-RNVVSWTTMISSNK-----DDAVSIFLNMRFDG 367
Query: 378 VRPNGFTYSIILTA----QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAA 433
V PN T+ ++ A + ++H IKT + SVG + + Y K L++A
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 427
Query: 434 KVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT-AP 492
K FE I ++I++W+AM++G+AQ G + A+K++ +E + PNE+TF SV+NA A
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAE 486
Query: 493 SAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSM 552
+V+QG++ HA +K LN+ VSSAL+ MY+K+GNI+ + +VF +++ W S+
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546
Query: 553 ICGYAQHGHTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHH 612
I Y+ HG + + +F +M ++++ D +TF+ V+TAC G+VD+G + F++M+ ++
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYN 606
Query: 613 IYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL----------- 661
+ P+ EHYSCMVD+ RAG L++A ++++ +P ++ +++L +CRL
Sbjct: 607 LEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVA 666
Query: 662 ---ISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYS- 717
+ ++P S YV + N+YA W + A +RK M + V KEAG+SWI+V + S
Sbjct: 667 ELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSL 726
Query: 718 ----FLAGDISHPQSNQIYSKLEELSTRLKDAG 746
F +GD SHP+S++IY +E + + G
Sbjct: 727 TMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/607 (36%), Positives = 344/607 (56%), Gaps = 50/607 (8%)
Query: 281 STFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSM 340
S F I+ C T + L +QLH ++ +G D I LM YSK G A ++
Sbjct: 45 SLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGR 104
Query: 341 MR----------------------------EMKD--VVSWTAMISGHLQNGAIDLAVNFF 370
MR EM D + +W AMI+G +Q + ++ F
Sbjct: 105 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 164
Query: 371 CQMTREGVRPNGFTYSIILTAQPAVSPF----QVHAHIIKTNYEKSFSVGTALLNAYVKK 426
+M G P+ +T + + + Q+H + IK E V ++L + Y++
Sbjct: 165 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 224
Query: 427 GILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVI 486
G L + V + +++VAW+ ++ G AQ G E + +Y+ + G +PN+ TF +V+
Sbjct: 225 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 284
Query: 487 NACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDL 546
++C+ A QG+Q HA +IK ++ + V S+L++MYSK G + A++ F + D
Sbjct: 285 SSCS-DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDE 343
Query: 547 VSWNSMICGYAQHGHTKKALEVFKEMRRQ-DLEFDGITFIGVITACTHAGLVDEGQQYFD 605
V W+SMI Y HG +A+E+F M Q ++E + + F+ ++ AC+H+GL D+G + FD
Sbjct: 344 VMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFD 403
Query: 606 IMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAAC------ 659
+MV ++ P ++HY+C+VDL RAG L++A II MP +W+T+L+AC
Sbjct: 404 MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNA 463
Query: 660 --------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEV 711
++ + P+DSA YVLL+N++A+ W++ + VRK M D+ VKKEAG SW E
Sbjct: 464 EMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEH 523
Query: 712 KNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHS 771
K + + F GD S +S +IYS L+EL+ +K GYKPDT+ VL D+D+E KE+ L QHS
Sbjct: 524 KGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHS 583
Query: 772 ERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGL 831
E+LA+AF L+ P GAP++I+KNLRVC DCH K IS ++ R+I +RD +RFHHF G
Sbjct: 584 EKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGK 643
Query: 832 CSCGDYW 838
CSCGDYW
Sbjct: 644 CSCGDYW 650
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 207/458 (45%), Gaps = 47/458 (10%)
Query: 64 NLFLGIRRLGLPLFGST--LSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNV------ 115
NL +R L +F +T + +++C G+Q+HC V SGF+ D +
Sbjct: 28 NLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMS 87
Query: 116 -------------------------STSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSL 150
S L++ Y+R ++ + R+VFD+M + + +W ++
Sbjct: 88 MYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 147
Query: 151 LSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
++G + + N+ L LF M G P+ +T +V A V+ Q+H IK G
Sbjct: 148 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 207
Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
E+ V ++L MY+++ ++D V M R+ + WN+++ G N +
Sbjct: 208 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 267
Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
M ++G + TFV+V+ C+ +Q+H++ +K G + + L+ YSKCG
Sbjct: 268 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 327
Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTRE-GVRPNGFTYSIIL 389
+ DA+K FS RE +D V W++MIS + +G D A+ F M + + N + +L
Sbjct: 328 LGDAAKAFS-EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLL 386
Query: 390 TA-------QPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEK 442
A + F + K ++ T +++ + G LD+A + + K
Sbjct: 387 YACSHSGLKDKGLELFDMMVE--KYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 444
Query: 443 -DIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNE 479
DIV W +L+ + E A ++++++ + PN+
Sbjct: 445 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 480
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 8/330 (2%)
Query: 32 QSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPLFGSTLSSVLKTCGCL 91
+ +FD P R +N ++ + ++E L+LF + LG TL SV L
Sbjct: 130 RKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL 189
Query: 92 FDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMRTNNVEDGRRVFDDMNESNVVSWTSLL 151
G+Q+H +K G D+ V++SL +YMR ++DG V M N+V+W +L+
Sbjct: 190 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 249
Query: 152 SGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGGE 211
G A+N + VL L+ M++ G +PN TF TVL +D I Q+H IK G
Sbjct: 250 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 309
Query: 212 VVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNNM 271
V +V ++LISMY K + DA F ED D + W+SM++ Y + EA E FN M
Sbjct: 310 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 369
Query: 272 G-LAGAELTRSTFVSVIKLCATT----KELRLARQLHSQVLKNGIDFDHNIRTGLMVAYS 326
E+ F++++ C+ + K L L + V K G T ++
Sbjct: 370 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMM---VEKYGFKPGLKHYTCVVDLLG 426
Query: 327 KCGKMEDASKIFSMMREMKDVVSWTAMISG 356
+ G ++ A I M D+V W ++S
Sbjct: 427 RAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 83/210 (39%), Gaps = 34/210 (16%)
Query: 478 NEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEV 537
N F+ I +CT ++ GKQ H + + ++ + + L++MYSK G+ SA V
Sbjct: 43 NTSLFTPFIQSCTT-RQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAV 101
Query: 538 FKRQRK-------------------------------RDLVSWNSMICGYAQHGHTKKAL 566
+ R RK R L +WN+MI G Q ++ L
Sbjct: 102 YGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGL 161
Query: 567 EVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDL 626
+F+EM D T V + V GQQ + ++ + + S + +
Sbjct: 162 SLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI-KYGLELDLVVNSSLAHM 220
Query: 627 YSRAGMLEKAMDIINRMPFAASATVWRTVL 656
Y R G L+ +I MP + W T++
Sbjct: 221 YMRNGKLQDGEIVIRSMP-VRNLVAWNTLI 249
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/592 (37%), Positives = 348/592 (58%), Gaps = 22/592 (3%)
Query: 262 MEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGL 321
M+A ++ + GL +T+ +IK C + + + + + NG + L
Sbjct: 46 MKAMDSLQSHGLWADS---ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVL 102
Query: 322 MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQMTREGVRPN 381
+ Y K + DA ++F M + ++V+SWT MIS + + A+ M R+ VRPN
Sbjct: 103 INMYVKFNLLNDAHQLFDQMPQ-RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 382 GFTYSIILTAQPAVSPFQ-VHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELID 440
+TYS +L + +S + +H IIK E V +AL++ + K G ++A VF+ +
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 441 EKDIVAWSAMLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACTAPSAAVEQGK 500
D + W++++ G+AQ ++ A+++++++ G + T +SV+ ACT A +E G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL-ALLELGM 280
Query: 501 QFHACSIKAKLNNALCVSSALVTMYSKKGNIESASEVFKRQRKRDLVSWNSMICGYAQHG 560
Q H +K + L +++ALV MY K G++E A VF + ++RD+++W++MI G AQ+G
Sbjct: 281 QAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 561 HTKKALEVFKEMRRQDLEFDGITFIGVITACTHAGLVDEGQQYFDIMVNEHHIYPTMEHY 620
++++AL++F+ M+ + + IT +GV+ AC+HAGL+++G YF M + I P EHY
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 621 SCMVDLYSRAGMLEKAMDIINRMPFAASATVWRTVLAACRL--------------ISLQP 666
CM+DL +AG L+ A+ ++N M A WRT+L ACR+ I+L P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 667 HDSAIYVLLSNMYAATGHWQERARVRKLMNDRKVKKEAGYSWIEVKNKTYSFLAGDISHP 726
D+ Y LLSN+YA + W +R M DR +KKE G SWIEV + ++F+ GD SHP
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518
Query: 727 QSNQIYSKLEELSTRLKDAGYKPDTSYVLQDIDDEHKEAILSQHSERLAIAFGLVATPAG 786
Q ++ KL +L RL GY P+T++VLQD++ E E L HSE+LA+AFGL+ P
Sbjct: 519 QIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIE 578
Query: 787 APLQIVKNLRVCGDCHTVIKLISKLERRDIVVRDTNRFHHFKEGLCSCGDYW 838
++I KNLR+CGDCH KL SKLE R IV+RD R+HHF++G CSCGDYW
Sbjct: 579 KVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 221/453 (48%), Gaps = 44/453 (9%)
Query: 17 QPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLFLGIRRLGLPL 76
+P +LR YS DQ+L E+ RL ++ RD A+ ++ GL
Sbjct: 12 RPVVTLRCS-YSSTDQTLL-------LSEFTRLCYQ--RDL--PRAMKAMDSLQSHGLWA 59
Query: 77 FGSTLSSVLKTCGCLFDHVFGRQVH-----CECVKSGFARD----VNVSTSLVDLYMRTN 127
+T S ++K C + R VH C + R VNV L+++Y++ N
Sbjct: 60 DSATYSELIKCC------ISNRAVHEGNLICRHLYFNGHRPMMFLVNV---LINMYVKFN 110
Query: 128 NVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTVLG 187
+ D ++FD M + NV+SWT+++S Y++ K++ + LEL M + ++PN +T+S+VL
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 188 VLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSIT 247
++ +H +IK G E V +ALI ++ K DA +VFD M D+I
Sbjct: 171 SCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 248 WNSMVAGYVTNELHMEAFETFNNMGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVL 307
WNS++ G+ N A E F M AG ++T SV++ C L L Q H ++
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 308 KNGIDFDHNIRTGLMVAYSKCGKMEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAV 367
K D D + L+ Y KCG +EDA ++F+ M+E +DV++W+ MISG QNG A+
Sbjct: 288 K--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKE-RDVITWSTMISGLAQNGYSQEAL 344
Query: 368 NFFCQMTREGVRPNGFTYSIILTAQPAVSPFQVHAHIIKTNYEKSFSVGT------ALLN 421
F +M G +PN T +L A + + ++ +K + + +++
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS-MKKLYGIDPVREHYGCMID 403
Query: 422 AYVKKGILDEAAKVF-ELIDEKDIVAWSAMLAG 453
K G LD+A K+ E+ E D V W +L
Sbjct: 404 LLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/563 (39%), Positives = 340/563 (60%), Gaps = 25/563 (4%)
Query: 300 RQLHSQVLKNGIDF-DHNIRTGL---MVAYSKCGKMEDASKIFSMMREMKDVVSWTAMIS 355
RQ+H+ +++G+ D + L +V+ M A K+FS + + +V W +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 356 GHLQNGAIDLAVNFFCQMTREG-VRPNGFTYSIILTAQPAVSPFQ----VHAHIIKTNYE 410
G+ + G A + + +M G V P+ TY ++ A ++ + +H+ +I++ +
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 411 KSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSAMLAGYAQIGDTEGAVKIYRQL 470
V +LL+ Y G + A KVF+ + EKD+VAW++++ G+A+ G E A+ +Y ++
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 471 TSEGVKPNEFTFSSVINACTAPSAAVEQGKQFHACSIKAKLNNALCVSSALVTMYSKKGN 530
S+G+KP+ FT S+++AC A A+ GK+ H IK L L S+ L+ +Y++ G
Sbjct: 214 NSKGIKPDGFTIVSLLSAC-AKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 531 IESASEVFKRQRKRDLVSWNSMICGYAQHGHTKKALEVFKEMRR-QDLEFDGITFIGVIT 589
+E A +F ++ VSW S+I G A +G K+A+E+FK M + L ITF+G++
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 590 ACTHAGLVDEGQQYFDIMVNEHHIYPTMEHYSCMVDLYSRAGMLEKAMDIINRMPFAASA 649
AC+H G+V EG +YF M E+ I P +EH+ CMVDL +RAG ++KA + I MP +
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 650 TVWRTVLAAC--------------RLISLQPHDSAIYVLLSNMYAATGHWQERARVRKLM 695
+WRT+L AC +++ L+P+ S YVLLSNMYA+ W + ++RK M
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 696 NDRKVKKEAGYSWIEVKNKTYSFLAGDISHPQSNQIYSKLEELSTRLKDAGYKPDTSYVL 755
VKK G+S +EV N+ + FL GD SHPQS+ IY+KL+E++ RL+ GY P S V
Sbjct: 453 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVY 512
Query: 756 QDIDDEHKEAILSQHSERLAIAFGLVATPAGAPLQIVKNLRVCGDCHTVIKLISKLERRD 815
D+++E KE + HSE++AIAF L++TP +P+ +VKNLRVC DCH IKL+SK+ R+
Sbjct: 513 VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNRE 572
Query: 816 IVVRDTNRFHHFKEGLCSCGDYW 838
IVVRD +RFHHFK G CSC DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 42/377 (11%)
Query: 7 LKSLINPQTKQPPKSLRSPFYSKKDQSLFDRSPQRNFVEYNRLLFEYCRDSLHQEALNLF 66
L SL +P PP S +SK ++ + N +N L+ Y A +L+
Sbjct: 60 LVSLPSP----PPMSYAHKVFSKIEKPI-------NVFIWNTLIRGYAEIGNSISAFSLY 108
Query: 67 LGIRRLGLPLFGS-TLSSVLKTCGCLFDHVFGRQVHCECVKSGFARDVNVSTSLVDLYMR 125
+R GL + T ++K + D G +H ++SGF + V SL+ LY
Sbjct: 109 REMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN 168
Query: 126 TNNVEDGRRVFDDMNESNVVSWTSLLSGYARNKMNDRVLELFHRMQVEGIKPNSFTFSTV 185
+V +VFD M E ++V+W S+++G+A N + L L+ M +GIKP+ FT ++
Sbjct: 169 CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL 228
Query: 186 LGVLADEGIVATAVQVHTMVIKNGGEVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDS 245
L A G + +VH +IK G N L+ +Y + V +A+ +FD M D++S
Sbjct: 229 LSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS 288
Query: 246 ITWNSMVAGYVTNELHMEAFETFNNM----GLAGAELTRSTFVSVIKLCATTKELRLARQ 301
++W S++ G N EA E F M GL E+ TFV ++ C+
Sbjct: 289 VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI---TFVGILYACS---------- 335
Query: 302 LHSQVLKNGIDFDHNIRT-----------GLMV-AYSKCGKMEDASKIFSMMREMKDVVS 349
H ++K G ++ +R G MV ++ G+++ A + M +VV
Sbjct: 336 -HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394
Query: 350 WTAMISGHLQNGAIDLA 366
W ++ +G DLA
Sbjct: 395 WRTLLGACTVHGDSDLA 411
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 188/401 (46%), Gaps = 39/401 (9%)
Query: 98 RQVHCECVKSGFA-RDVNVSTSLVDLYMRT----NNVEDGRRVFDDMNES-NVVSWTSLL 151
RQ+H ++ G + D + L+ Y+ + + +VF + + NV W +L+
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 152 SGYARNKMNDRVLELFHRMQVEG-IKPNSFTFSTVLGVLADEGIVATAVQVHTMVIKNGG 210
GYA + L+ M+V G ++P++ T+ ++ + V +H++VI++G
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 211 EVVTSVCNALISMYLKSKMVRDARAVFDGMEDRDSITWNSMVAGYVTNELHMEAFETFNN 270
+ V N+L+ +Y V A VFD M ++D + WNS++ G+ N EA +
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 271 MGLAGAELTRSTFVSVIKLCATTKELRLARQLHSQVLKNGIDFDHNIRTGLMVAYSKCGK 330
M G + T VS++ CA L L +++H ++K G+ + + L+ Y++CG+
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 331 MEDASKIFSMMREMKDVVSWTAMISGHLQNGAIDLAVNFFCQM-TREGVRPNGFTYSIIL 389
+E+A +F M + K+ VSWT++I G NG A+ F M + EG+ P T+ IL
Sbjct: 273 VEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 331
Query: 390 TAQPAVSPFQVHAHIIKTNYEKSFSVGTALLNAYVKKGILDEAAKVFELIDEKDIVAWSA 449
A H ++K +E Y ++ + E K+ E I +
Sbjct: 332 YACS-------HCGMVKEGFE------------YFRR--MREEYKI-----EPRIEHFGC 365
Query: 450 MLAGYAQIGDTEGAVKIYRQLTSEGVKPNEFTFSSVINACT 490
M+ A+ G + K Y + S ++PN + +++ ACT
Sbjct: 366 MVDLLARAGQVK---KAYEYIKSMPMQPNVVIWRTLLGACT 403
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 297,873,373
Number of Sequences: 539616
Number of extensions: 12051166
Number of successful extensions: 42136
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 30343
Number of HSP's gapped (non-prelim): 2789
length of query: 838
length of database: 191,569,459
effective HSP length: 126
effective length of query: 712
effective length of database: 123,577,843
effective search space: 87987424216
effective search space used: 87987424216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)